Query psy15127
Match_columns 633
No_of_seqs 267 out of 3169
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 21:17:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15127.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15127hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jll_A NCAM2, neural cell adhe 100.0 1.1E-42 3.7E-47 357.3 43.4 365 71-633 1-379 (389)
2 3b43_A Titin; I-SET IG fold, e 100.0 4.3E-42 1.5E-46 370.0 47.9 456 14-498 31-563 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 4.1E-39 1.4E-43 346.8 42.9 358 29-392 135-569 (570)
4 1e07_A Carcinoembryonic antige 100.0 1.3E-36 4.6E-41 332.9 49.6 420 41-496 64-547 (642)
5 1e07_A Carcinoembryonic antige 100.0 9.9E-37 3.4E-41 334.0 44.3 419 29-498 144-633 (642)
6 3dmk_A DOWN syndrome cell adhe 100.0 3E-36 1E-40 339.5 43.8 430 39-498 190-706 (816)
7 3dmk_A DOWN syndrome cell adhe 100.0 5.5E-37 1.9E-41 345.5 32.2 425 45-497 303-801 (816)
8 3qs9_E FL cytokine receptor; i 100.0 9.2E-36 3.1E-40 314.9 27.1 336 49-393 104-510 (527)
9 2v5y_A Receptor-type tyrosine- 100.0 5.5E-35 1.9E-39 324.0 32.9 416 86-632 91-555 (731)
10 3kld_A Contactin 4, axcam, BIG 100.0 2.1E-34 7.1E-39 294.5 29.8 316 70-392 4-382 (384)
11 2ec8_A MAST/stem cell growth f 100.0 4.9E-35 1.7E-39 312.4 25.7 348 45-397 77-514 (524)
12 3qs7_E FL cytokine receptor; i 100.0 2.2E-34 7.4E-39 296.5 24.7 318 73-397 50-418 (423)
13 3laf_A Deleted in colorectal c 100.0 1.4E-33 4.8E-38 290.8 28.8 314 6-334 40-401 (403)
14 2v5m_A Dscam; neurobiology SPL 100.0 3.5E-33 1.2E-37 286.3 29.3 319 70-391 2-387 (388)
15 3laf_A Deleted in colorectal c 100.0 1.5E-32 5.1E-37 283.1 32.6 320 69-394 19-402 (403)
16 1cs6_A Axonin-1; neural cell a 100.0 4.6E-33 1.6E-37 284.7 27.4 316 69-392 2-381 (382)
17 2v5y_A Receptor-type tyrosine- 100.0 1.9E-32 6.6E-37 303.6 34.6 435 70-633 164-695 (731)
18 1bih_A Hemolin; insect immunit 100.0 6.7E-33 2.3E-37 284.9 27.9 320 68-391 3-394 (395)
19 2ocw_A Polymeric-immunoglobuli 100.0 1.9E-31 6.6E-36 288.8 39.4 340 49-395 76-548 (585)
20 3p3y_A Neurofascin; IG domains 100.0 1.7E-32 6E-37 282.7 29.6 321 68-393 13-403 (404)
21 2ec8_A MAST/stem cell growth f 100.0 6.9E-32 2.4E-36 288.1 33.6 412 58-501 22-506 (524)
22 2rik_A Titin; I-SET IG fold, p 100.0 1.3E-30 4.3E-35 254.9 33.7 259 69-333 3-283 (284)
23 3qs9_E FL cytokine receptor; i 100.0 4.1E-32 1.4E-36 286.9 24.6 334 80-433 57-444 (527)
24 2nzi_A Titin; IG-domain, FNIII 100.0 1.6E-30 5.5E-35 257.0 34.0 282 70-511 3-296 (305)
25 1z7z_I Intercellular adhesion 100.0 2.7E-31 9.4E-36 277.8 28.5 323 48-393 50-449 (450)
26 3kld_A Contactin 4, axcam, BIG 100.0 2.7E-31 9.1E-36 271.4 27.0 303 14-333 34-382 (384)
27 2ocw_A Polymeric-immunoglobuli 100.0 1.4E-29 4.8E-34 274.1 41.2 401 75-497 4-537 (585)
28 2rcj_C Light chain; immunoglob 100.0 8.8E-31 3E-35 279.4 30.6 322 6-331 19-417 (523)
29 2v5m_A Dscam; neurobiology SPL 100.0 4E-31 1.4E-35 271.0 24.9 300 14-332 30-387 (388)
30 1bih_A Hemolin; insect immunit 100.0 6.7E-31 2.3E-35 270.0 25.5 308 6-332 25-394 (395)
31 3v2a_R Vascular endothelial gr 100.0 5.2E-32 1.8E-36 303.4 17.8 458 5-499 146-750 (772)
32 1z7z_I Intercellular adhesion 100.0 5.9E-30 2E-34 267.7 30.8 375 74-496 2-440 (450)
33 3qs7_E FL cytokine receptor; i 100.0 6E-31 2E-35 270.8 22.6 278 49-338 104-418 (423)
34 1qz1_A Neural cell adhesion mo 100.0 3.1E-30 1.1E-34 253.1 26.7 261 71-334 2-290 (291)
35 3p3y_A Neurofascin; IG domains 100.0 1.7E-30 5.8E-35 267.8 25.6 284 46-334 71-403 (404)
36 2yd9_A Receptor-type tyrosine- 100.0 1E-29 3.6E-34 251.0 28.0 258 69-335 4-292 (304)
37 1cs6_A Axonin-1; neural cell a 100.0 7.2E-30 2.4E-34 261.0 27.5 299 15-333 34-381 (382)
38 2jll_A NCAM2, neural cell adhe 100.0 3.5E-29 1.2E-33 256.5 31.2 331 14-508 26-386 (389)
39 2wim_A N-CAM 2, NCAM2, neural 100.0 2.7E-29 9.1E-34 246.5 27.6 257 70-334 3-284 (291)
40 2rcj_C Light chain; immunoglob 100.0 2.4E-28 8.1E-33 260.6 31.9 312 74-390 3-417 (523)
41 1wio_A CD4, T-cell surface gly 100.0 5.3E-30 1.8E-34 259.9 18.1 296 5-332 12-361 (363)
42 3v2a_R Vascular endothelial gr 100.0 7.4E-31 2.5E-35 294.0 12.4 432 47-495 85-651 (772)
43 2y25_A Myomesin; structural pr 100.0 2.8E-29 9.7E-34 249.5 20.5 258 69-334 5-315 (317)
44 1wio_A CD4, T-cell surface gly 100.0 7.9E-29 2.7E-33 251.2 21.3 297 80-392 3-362 (363)
45 1i1r_A GP130, interleukin-6 re 100.0 1.3E-27 4.5E-32 235.5 22.7 266 250-633 14-290 (303)
46 4fqp_A Poliovirus receptor; im 100.0 9.6E-28 3.3E-32 237.9 20.5 252 74-335 3-305 (313)
47 2o26_X MAST/stem cell growth f 100.0 2.8E-27 9.6E-32 231.9 23.3 252 69-334 10-288 (290)
48 1ry7_B FGFR-3, fibroblast grow 100.0 1.8E-28 6.2E-33 245.7 13.6 254 76-334 13-327 (334)
49 1itb_B Type 1 interleukin-1 re 100.0 8.5E-28 2.9E-32 238.6 16.1 256 77-333 11-313 (315)
50 2y23_A Myomesin; structural pr 99.9 1.7E-26 5.7E-31 228.9 24.0 249 78-332 8-310 (312)
51 3rjd_A High affinity immunoglo 99.9 1.6E-26 5.4E-31 222.8 23.1 231 71-324 1-249 (262)
52 1qgc_4 Protein (immunoglobulin 99.9 4.3E-27 1.5E-31 245.1 19.8 316 73-389 3-435 (438)
53 3ejj_X Macrophage colony-stimu 99.9 7.7E-27 2.6E-31 228.6 19.6 256 70-334 3-281 (289)
54 4fom_A Poliovirus receptor-rel 99.9 9.5E-28 3.3E-32 237.4 12.3 252 78-336 6-302 (308)
55 3oq3_B IFN-alpha/beta binding 99.9 1.2E-26 4.1E-31 231.6 19.4 247 79-332 37-328 (329)
56 3o4o_C Interleukin-1 receptor 99.9 9.9E-28 3.4E-32 240.8 10.8 263 69-333 16-334 (339)
57 3mjg_X Beta-type platelet-deri 99.9 2.9E-26 1E-30 224.5 20.3 250 72-336 1-280 (289)
58 4dep_C Interleukin-1 receptor 99.9 2.3E-26 7.9E-31 231.8 19.5 254 78-333 14-332 (349)
59 2wng_A Tyrosine-protein phosph 99.9 1.4E-25 4.7E-30 223.8 24.0 249 72-324 4-309 (327)
60 1qgc_4 Protein (immunoglobulin 99.9 4.3E-27 1.5E-31 245.1 13.0 285 40-330 64-435 (438)
61 2oz4_A Intercellular adhesion 99.9 1.7E-25 5.7E-30 216.0 21.8 224 82-334 14-264 (265)
62 2d9q_B Granulocyte colony-stim 99.9 1.5E-25 5E-30 221.8 20.3 264 250-633 10-296 (313)
63 3u83_A Poliovirus receptor-rel 99.9 9E-26 3.1E-30 225.7 17.2 253 71-335 14-321 (331)
64 4dkd_C Macrophage colony-stimu 99.9 2.5E-26 8.6E-31 225.3 12.1 258 69-335 2-282 (292)
65 3l5h_A Interleukin-6 receptor 99.9 2.6E-26 8.9E-31 248.6 7.3 483 76-633 8-581 (589)
66 2rik_A Titin; I-SET IG fold, p 99.9 2.8E-23 9.6E-28 202.6 27.7 215 14-237 31-273 (284)
67 3vh8_G Killer cell immunoglobu 99.9 2.3E-24 7.9E-29 213.8 17.1 254 68-333 21-312 (316)
68 1igt_B IGG2A intact antibody - 99.9 9.6E-25 3.3E-29 227.5 14.0 248 75-324 4-331 (444)
69 1hzh_H IGG, immunoglobulin hea 99.9 3.4E-24 1.2E-28 224.2 17.7 277 40-322 66-442 (457)
70 1igt_B IGG2A intact antibody - 99.9 5.5E-24 1.9E-28 221.8 18.2 277 40-321 66-432 (444)
71 2yd6_A PTPRD protein; hydrolas 99.9 7.6E-23 2.6E-27 190.1 22.9 188 69-334 4-204 (212)
72 1hzh_H IGG, immunoglobulin hea 99.9 3.8E-24 1.3E-28 223.8 15.6 247 75-324 4-340 (457)
73 1n26_A IL-6 receptor alpha cha 99.9 5E-23 1.7E-27 204.5 22.7 261 249-633 15-286 (325)
74 2yd1_A Tyrosine-protein phosph 99.9 1.1E-22 3.6E-27 189.1 23.4 184 70-337 5-203 (212)
75 2a38_A Titin; Z1Z2, structural 99.9 1.2E-22 4.1E-27 185.9 23.0 181 69-333 3-194 (194)
76 2j8h_A Titin, connectin; cardi 99.9 1.3E-22 4.4E-27 186.2 22.9 187 70-333 3-196 (197)
77 2yd9_A Receptor-type tyrosine- 99.9 2.7E-23 9.3E-28 204.9 19.0 187 48-237 63-280 (304)
78 2wv3_A Neuroplastin; igcam, me 99.9 3.7E-22 1.2E-26 182.0 24.7 179 70-333 2-189 (190)
79 1qz1_A Neural cell adhesion mo 99.9 6.7E-23 2.3E-27 200.7 20.5 223 7-237 22-279 (291)
80 2wim_A N-CAM 2, NCAM2, neural 99.9 7E-23 2.4E-27 200.6 20.2 212 19-238 34-274 (291)
81 2iep_A Muscle-specific kinase 99.9 1.2E-22 4.2E-27 185.5 20.2 182 68-334 4-190 (192)
82 1cfb_A Drosophila neuroglian; 99.9 1.5E-22 5.2E-27 186.9 20.9 186 409-631 5-192 (205)
83 3p4l_A Neogenin; iron homeosta 99.9 1.3E-22 4.5E-27 188.3 19.1 190 409-633 4-196 (211)
84 1igy_B IGG1 intact antibody MA 99.9 3.6E-24 1.2E-28 222.4 8.7 278 40-322 65-423 (434)
85 2vkw_A Neural cell adhesion mo 99.9 1.7E-22 5.8E-27 187.2 18.7 182 410-633 9-195 (209)
86 2vr9_A Roundabout 1, ROBO; imm 99.9 3.8E-22 1.3E-26 186.2 21.2 190 69-333 7-205 (217)
87 1iga_A IGA1; immunoglobulin; N 99.9 7.5E-22 2.6E-26 207.3 25.4 254 74-330 4-341 (475)
88 3lcy_A Titin; A-BAND, IG tande 99.9 6.7E-22 2.3E-26 181.3 22.0 181 69-334 5-196 (197)
89 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.6E-21 5.3E-26 177.6 23.5 179 70-333 1-187 (189)
90 1epf_A NCAM, protein (neural c 99.9 1.3E-21 4.4E-26 178.5 21.4 179 71-332 2-189 (191)
91 3l5h_A Interleukin-6 receptor 99.9 1.1E-23 3.9E-28 227.8 8.9 366 164-633 6-390 (589)
92 2v9r_A Roundabout homolog 1; p 99.9 9.1E-22 3.1E-26 182.8 20.3 185 69-336 7-204 (212)
93 2ibg_A CG9211-PA, GH03927P; IH 99.9 8.7E-22 3E-26 183.2 19.7 186 411-633 3-204 (214)
94 2v44_A NCAM2, neural cell adhe 99.9 2.4E-21 8.3E-26 176.3 22.0 177 73-333 4-186 (189)
95 2c5d_C AXL oncogene, tyrosine- 99.9 1.3E-21 4.3E-26 179.2 20.2 173 71-332 2-191 (195)
96 1igy_B IGG1 intact antibody MA 99.9 9.5E-25 3.2E-29 226.8 -0.8 250 75-324 3-321 (434)
97 1f97_A Junction adhesion molec 99.9 7.4E-22 2.5E-26 183.3 18.4 189 71-334 1-207 (212)
98 1iga_A IGA1; immunoglobulin; N 99.9 1.9E-21 6.6E-26 204.2 23.5 279 40-323 67-443 (475)
99 2nzi_A Titin; IG-domain, FNIII 99.9 6E-21 2.1E-25 188.2 25.4 269 249-633 13-284 (305)
100 3sgj_C Human FCG3A receptor; r 99.9 5E-22 1.7E-26 182.8 16.2 171 69-337 5-177 (204)
101 3f7q_A Integrin beta-4, GP150; 99.9 5.2E-22 1.8E-26 187.3 16.7 185 409-633 5-190 (234)
102 3lpw_A A77-A78 domain from tit 99.9 1.6E-21 5.4E-26 178.9 19.0 184 409-633 5-188 (197)
103 2va4_A NCAM2, N-CAM 2, neural 99.9 5.4E-21 1.9E-25 174.4 22.2 185 70-333 1-192 (192)
104 4fa8_A Secreted protein BARF1; 99.9 1.5E-22 5.2E-27 185.3 11.6 120 80-201 2-145 (203)
105 2y23_A Myomesin; structural pr 99.9 3.8E-22 1.3E-26 197.5 15.1 221 7-238 21-302 (312)
106 3oq3_B IFN-alpha/beta binding 99.9 4.2E-22 1.5E-26 198.6 15.4 212 15-237 65-319 (329)
107 1za6_B IGG heavy chain; immuno 99.9 1.1E-22 3.6E-27 204.3 10.7 244 76-322 5-329 (344)
108 3ojm_B Fibroblast growth facto 99.9 2.3E-21 8E-26 182.6 19.2 198 68-339 12-226 (231)
109 1rhf_A Tyrosine-protein kinase 99.9 2.8E-21 9.5E-26 174.8 18.3 131 71-203 2-140 (182)
110 3k0w_A Mucosa-associated lymph 99.9 3E-21 1E-25 180.1 18.2 191 70-341 17-209 (218)
111 3grw_A Fibroblast growth facto 99.9 2.9E-21 9.8E-26 183.4 18.3 201 70-343 10-227 (241)
112 3rbs_A Myomesin-1; immunoglobu 99.9 1.5E-21 5E-26 179.8 14.8 174 71-332 3-205 (207)
113 2wqr_A IG epsilon chain C regi 99.9 2.3E-22 8E-27 199.9 9.2 236 87-323 25-309 (323)
114 3l5i_A Interleukin-6 receptor 99.9 1.2E-20 4E-25 184.6 21.1 214 361-633 65-282 (290)
115 3t1w_A Four-domain fibronectin 99.9 3.4E-19 1.2E-23 181.1 32.3 269 296-632 57-360 (375)
116 1ry7_B FGFR-3, fibroblast grow 99.9 7.2E-22 2.5E-26 197.6 11.5 225 5-238 26-317 (334)
117 2y25_A Myomesin; structural pr 99.9 4.7E-22 1.6E-26 197.3 9.9 214 16-237 35-304 (317)
118 1itb_B Type 1 interleukin-1 re 99.9 7.5E-21 2.6E-25 188.4 18.0 229 5-238 23-304 (315)
119 1zvo_C Myeloma immunoglobulin 99.9 7.7E-20 2.6E-24 193.3 26.5 247 76-324 5-387 (512)
120 1zvo_C Myeloma immunoglobulin 99.9 2.6E-19 8.8E-24 189.3 30.2 283 40-324 67-493 (512)
121 1nbq_A JAM, junctional adhesio 99.9 1.9E-21 6.4E-26 180.2 12.2 134 70-205 3-151 (209)
122 4dep_C Interleukin-1 receptor 99.9 3.1E-21 1.1E-25 194.2 14.4 194 44-237 75-322 (349)
123 2gee_A Hypothetical protein; f 99.9 2.3E-20 7.7E-25 171.7 18.8 173 412-632 25-197 (203)
124 1fnl_A Low affinity immunoglob 99.9 1.1E-20 3.6E-25 169.6 16.1 167 69-333 5-173 (175)
125 2o26_X MAST/stem cell growth f 99.9 7.1E-21 2.4E-25 186.2 15.9 205 28-238 41-278 (290)
126 1i1r_A GP130, interleukin-6 re 99.8 1.7E-19 5.9E-24 177.3 25.0 128 359-502 160-293 (303)
127 1fnf_A Fibronectin; RGD, extra 99.8 2E-18 6.9E-23 175.0 33.5 268 297-633 57-359 (368)
128 2q7n_A Leukemia inhibitory fac 99.8 1.3E-20 4.5E-25 193.9 17.4 259 250-632 213-474 (488)
129 3jz7_A MCAR, CAR, coxsackievir 99.8 6.6E-21 2.3E-25 177.1 13.7 177 74-333 3-211 (214)
130 1vca_A VCAM-D1,2, human vascul 99.8 8.5E-20 2.9E-24 167.5 20.9 129 74-203 3-135 (202)
131 1f2q_A High affinity immunoglo 99.8 6.4E-21 2.2E-25 171.3 12.8 169 68-334 1-171 (176)
132 3s97_C Contactin-1; carbonic a 99.8 5.5E-20 1.9E-24 169.0 19.4 178 71-333 8-200 (201)
133 2ifg_A High affinity nerve gro 99.8 2.1E-21 7.1E-26 195.0 10.4 198 58-334 137-345 (347)
134 3fl7_A Ephrin receptor; ATP-bi 99.8 5.4E-21 1.9E-25 198.0 12.6 210 365-633 303-525 (536)
135 3ejj_X Macrophage colony-stimu 99.8 2.6E-20 9E-25 182.0 16.7 192 47-238 50-271 (289)
136 2r15_A Myomesin-1; sarcomeric 99.8 6.2E-20 2.1E-24 170.3 18.3 170 83-333 14-209 (212)
137 3rjd_A High affinity immunoglo 99.8 1.4E-19 4.9E-24 173.9 20.9 181 47-237 47-248 (262)
138 3ry4_A Low affinity immunoglob 99.8 5.3E-20 1.8E-24 164.3 16.1 165 70-332 3-169 (170)
139 1bqu_A Protein (GP130); cytoki 99.8 2.2E-20 7.6E-25 173.7 13.5 184 409-633 7-194 (215)
140 4fom_A Poliovirus receptor-rel 99.8 1.1E-20 3.7E-25 186.6 12.0 186 47-237 73-289 (308)
141 1tdq_A Tenascin-R; extracellul 99.8 3.9E-19 1.3E-23 173.1 22.8 207 357-632 68-277 (283)
142 3p2t_A Leukocyte immunoglobuli 99.8 2.7E-20 9.2E-25 170.4 13.5 128 69-201 3-137 (196)
143 2d9q_B Granulocyte colony-stim 99.8 1.4E-19 4.9E-24 178.7 19.7 285 78-511 7-310 (313)
144 2ha1_A Fibronectin; beta sandw 99.8 4.2E-20 1.4E-24 169.8 14.6 180 412-632 2-194 (201)
145 1ugn_A LIR1, leukocyte immunog 99.8 7E-20 2.4E-24 167.9 16.1 130 69-203 3-140 (198)
146 3o4o_C Interleukin-1 receptor 99.8 2.1E-20 7.2E-25 187.3 13.6 221 14-238 51-325 (339)
147 2d3v_A Leukocyte immunoglobuli 99.8 6.1E-20 2.1E-24 168.0 14.7 130 69-203 3-139 (196)
148 1n26_A IL-6 receptor alpha cha 99.8 1.4E-18 4.9E-23 172.3 25.5 123 367-504 166-291 (325)
149 1uct_A Immunoglobulin alpha FC 99.8 5.4E-20 1.8E-24 171.0 14.1 130 69-202 7-145 (218)
150 2wng_A Tyrosine-protein phosph 99.8 6.2E-20 2.1E-24 182.8 15.3 228 5-238 21-309 (327)
151 3u83_A Poliovirus receptor-rel 99.8 1.1E-19 3.7E-24 181.4 17.1 192 40-237 80-309 (331)
152 3r4d_A CEA-related cell adhesi 99.8 2.3E-19 7.9E-24 165.9 18.1 172 75-333 3-199 (208)
153 1hng_A CD2; T lymphocyte adhes 99.8 6.9E-20 2.4E-24 164.1 13.8 81 80-160 5-100 (176)
154 3b5h_A Cervical EMMPRIN, HAB18 99.8 5E-19 1.7E-23 160.2 19.2 165 81-333 8-182 (184)
155 3mtr_A N-CAM-1, NCAM-1, neural 99.8 2.1E-18 7E-23 160.4 23.6 175 250-506 28-209 (215)
156 1qr4_A Protein (tenascin); fib 99.8 4.1E-19 1.4E-23 161.0 18.2 171 409-632 6-176 (186)
157 1zlg_A Anosmin 1; insulin-like 99.8 4.9E-19 1.7E-23 193.3 22.1 219 365-633 131-364 (680)
158 3bp6_B Programmed cell death 1 99.8 4.1E-19 1.4E-23 163.4 18.2 173 74-334 5-193 (202)
159 3r8q_A Fibronectin; heparin, F 99.8 1.8E-18 6.3E-23 168.9 23.5 210 357-631 74-283 (290)
160 2fbo_J V1V2;, variable region- 99.8 2.5E-19 8.7E-24 170.9 16.4 131 74-205 5-179 (250)
161 1zlg_A Anosmin 1; insulin-like 99.8 1.6E-18 5.5E-23 189.2 24.8 231 358-630 224-489 (680)
162 2x1w_L Vascular endothelial gr 99.8 3.5E-19 1.2E-23 165.3 16.2 185 77-335 13-208 (213)
163 2gi7_A GPVI protein; IG-like d 99.8 8.4E-20 2.9E-24 165.1 11.1 124 69-203 6-133 (184)
164 2ny1_B T-cell surface glycopro 99.8 4E-19 1.4E-23 160.8 15.4 157 80-336 4-181 (184)
165 3t1w_A Four-domain fibronectin 99.8 2.7E-18 9.3E-23 174.4 23.3 212 357-632 59-270 (375)
166 2c1o_A IGK-C protein; FAB frag 99.8 5E-20 1.7E-24 176.3 9.5 147 58-204 16-198 (254)
167 4f80_A Butyrophilin subfamily 99.8 9.1E-19 3.1E-23 164.2 17.5 121 78-201 11-158 (226)
168 4fqp_A Poliovirus receptor; im 99.8 3E-19 1E-23 176.6 14.8 186 47-237 78-293 (313)
169 1oll_A NK receptor; immune sys 99.8 2.2E-19 7.6E-24 163.0 12.7 128 69-201 2-136 (188)
170 4dkd_C Macrophage colony-stimu 99.8 1.9E-19 6.4E-24 176.2 13.1 189 48-237 51-270 (292)
171 3mj8_L Stimulatory hamster ant 99.8 2.8E-19 9.5E-24 166.1 11.8 133 72-205 2-159 (213)
172 3vh8_G Killer cell immunoglobu 99.8 7.4E-19 2.5E-23 174.0 15.5 181 46-236 72-296 (316)
173 2if7_A SLAM family member 6; N 99.8 1.2E-18 4.2E-23 158.6 15.8 85 76-160 3-107 (193)
174 2pet_A Lutheran blood group gl 99.8 2E-19 6.9E-24 169.3 10.8 132 75-206 4-164 (231)
175 1jbj_A CD3 epsilon and gamma e 99.8 2.7E-19 9.2E-24 162.0 10.8 170 80-324 8-179 (186)
176 1fnf_A Fibronectin; RGD, extra 99.8 6E-18 2.1E-22 171.4 22.0 211 357-632 58-268 (368)
177 3r8q_A Fibronectin; heparin, F 99.8 2.8E-18 9.5E-23 167.6 18.5 175 409-632 20-194 (290)
178 2oz4_A Intercellular adhesion 99.8 1E-18 3.4E-23 168.3 13.6 174 45-237 53-253 (265)
179 3sbw_C Programmed cell death 1 99.8 5.5E-18 1.9E-22 158.4 17.1 124 76-202 6-157 (222)
180 4frw_A Poliovirus receptor-rel 99.8 1.8E-18 6.2E-23 160.9 13.5 178 76-333 4-210 (218)
181 1tdq_A Tenascin-R; extracellul 99.8 1.4E-17 4.7E-22 162.1 19.1 173 409-632 14-189 (283)
182 3rbs_A Myomesin-1; immunoglobu 99.8 3.9E-18 1.3E-22 156.9 14.3 137 14-158 29-206 (207)
183 3mj6_A Junctional adhesion mol 99.8 1E-17 3.5E-22 161.5 17.9 197 71-334 5-237 (268)
184 2dtg_E Insulin receptor; IR ec 99.8 2.1E-19 7E-24 201.7 5.5 227 357-633 549-880 (897)
185 2p1y_A Bispecific alpha/beta T 99.8 2.3E-17 8E-22 155.9 18.9 126 73-200 2-165 (238)
186 1p6f_A NKP46, natural cytotoxi 99.8 4.6E-18 1.6E-22 160.3 13.8 128 69-201 5-139 (242)
187 3d9a_L Light chain of hyhel10 99.8 2.1E-18 7.1E-23 160.2 10.3 133 73-205 3-157 (213)
188 1cd9_B G-CSF-R, protein (G-CSF 99.8 1.1E-17 3.9E-22 155.3 15.3 184 408-633 3-202 (215)
189 3nl4_L Antigen binding fragmen 99.7 1.1E-17 3.6E-22 155.4 13.9 132 72-203 2-156 (213)
190 1lk3_L 9D7 light chain; antige 99.7 3.8E-18 1.3E-22 158.0 10.4 130 74-204 4-155 (210)
191 1hnf_A CD2; T lymphocyte adhes 99.7 4.9E-17 1.7E-21 145.6 17.1 83 78-160 6-105 (182)
192 3s96_B 3B5H10 FAB light chain; 99.7 4.4E-18 1.5E-22 158.6 10.5 132 72-204 2-165 (218)
193 4go6_B HCF C-terminal chain 1; 99.7 1.6E-18 5.4E-23 162.4 7.4 166 440-633 19-193 (232)
194 3s97_C Contactin-1; carbonic a 99.7 4.4E-17 1.5E-21 149.5 16.6 148 5-159 26-201 (201)
195 3tv3_L PGT128 light chain, IG 99.7 5.6E-18 1.9E-22 156.9 10.4 129 73-204 3-155 (211)
196 3pv7_A B7-H6, IG-like domain-c 99.7 2.5E-17 8.5E-22 156.8 14.9 126 76-203 8-161 (248)
197 1mq8_A ICAM-1, intercellular a 99.7 1.6E-17 5.3E-22 159.4 13.5 251 75-344 3-289 (291)
198 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.9E-17 6.3E-22 152.1 13.5 129 69-202 6-146 (201)
199 2zg1_A Sialic acid-binding IG- 99.7 8.8E-17 3E-21 149.2 18.2 124 74-200 3-165 (214)
200 3mjg_X Beta-type platelet-deri 99.7 1.7E-17 5.9E-22 161.9 13.9 184 48-238 51-268 (289)
201 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.4E-17 4.6E-22 153.1 12.1 121 80-204 3-149 (201)
202 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 7.6E-17 2.6E-21 154.1 17.6 126 72-199 4-173 (256)
203 1gsm_A Madcam-1, mucosal addre 99.7 2.4E-16 8.1E-21 142.5 19.7 127 72-205 7-142 (210)
204 1sy6_A T-cell surface glycopro 99.7 6.1E-18 2.1E-22 155.3 9.5 56 83-144 15-70 (204)
205 4fmk_A Poliovirus receptor-rel 99.7 1.5E-17 5E-22 155.5 12.1 125 76-201 6-161 (225)
206 4i0k_A CD276 antigen; immunogl 99.7 4.2E-18 1.4E-22 159.2 8.1 175 79-336 3-208 (222)
207 1f3r_B FV antibody fragment; I 99.7 4.7E-17 1.6E-21 155.7 15.4 122 76-198 5-175 (257)
208 2ghw_B Anti-SARS SCFV antibody 99.7 5.5E-17 1.9E-21 154.3 15.6 122 76-198 7-171 (247)
209 3esu_F Antibody 14B7* light ch 99.7 1.3E-16 4.3E-21 152.1 17.2 127 72-199 5-170 (250)
210 2r15_A Myomesin-1; sarcomeric 99.7 8.7E-17 3E-21 148.9 15.6 144 10-160 25-211 (212)
211 3uzq_A Anti-dengue MAB 4E11; d 99.7 4.1E-17 1.4E-21 155.8 13.5 125 74-199 4-174 (253)
212 1q0x_L FAB 9B1, light chain; a 99.7 3.7E-17 1.3E-21 151.6 12.5 131 74-205 4-160 (212)
213 1nqb_A Single-chain antibody f 99.7 1.1E-16 3.9E-21 152.8 16.1 122 75-198 4-162 (256)
214 3r06_A Anti-mouse CD3epsilon a 99.7 1.8E-17 6E-22 153.8 10.1 133 72-204 2-156 (213)
215 2wqr_A IG epsilon chain C regi 99.7 5.5E-18 1.9E-22 168.3 6.4 189 49-237 73-309 (323)
216 3gkz_A Anti-methamphetamine si 99.7 1.9E-16 6.4E-21 151.6 16.8 127 72-199 9-179 (257)
217 2dru_A Chimera of CD48 antigen 99.7 2.5E-16 8.6E-21 141.2 16.5 116 78-201 6-139 (180)
218 1c1e_H Catalytic antibody 1E9 99.7 3.1E-17 1E-21 152.9 10.6 126 76-202 5-166 (219)
219 1ccz_A Protein (CD58); LFA-3, 99.7 1.6E-16 5.5E-21 141.1 14.4 78 80-160 4-95 (171)
220 3umt_A SCFV heavy chain and li 99.7 2.8E-16 9.7E-21 150.2 17.0 123 76-199 7-175 (256)
221 3s98_A Interferon alpha/beta r 99.7 1.5E-16 5.1E-21 155.7 15.1 219 364-633 68-294 (306)
222 3n06_B PRL-R, prolactin recept 99.7 1.5E-16 5.3E-21 146.9 14.3 182 409-633 3-196 (210)
223 1za6_B IGG heavy chain; immuno 99.7 2.4E-17 8.1E-22 165.2 9.4 196 40-237 66-330 (344)
224 3sob_L Antibody light chain; b 99.7 4E-17 1.4E-21 154.2 10.5 134 71-204 24-179 (237)
225 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.1E-17 1.1E-21 153.3 9.5 127 76-202 5-169 (222)
226 1mju_H Immunoglobulin MS6-12; 99.7 8.8E-17 3E-21 150.5 12.1 128 75-202 4-163 (227)
227 3juy_B 3B3 single chain varian 99.7 4.1E-16 1.4E-20 149.1 17.0 129 70-199 5-187 (256)
228 1b6u_A KIR2DL3, P58 killer cel 99.7 2E-16 6.9E-21 150.2 14.6 161 69-234 5-182 (257)
229 2v44_A NCAM2, neural cell adhe 99.7 4.1E-16 1.4E-20 141.5 16.1 126 32-157 39-185 (189)
230 4fa8_A Secreted protein BARF1; 99.7 4.6E-17 1.6E-21 148.8 9.5 104 48-151 69-194 (203)
231 2xzc_L FAB A.17 light chain; i 99.7 6E-17 2.1E-21 150.6 10.1 128 77-204 6-158 (216)
232 3auv_A SC-DSFV derived from th 99.7 1.6E-16 5.5E-21 153.7 13.1 128 71-199 12-173 (276)
233 3d9a_H Heavy chain of hyhel10 99.7 4.2E-17 1.4E-21 150.9 8.6 126 76-202 5-160 (210)
234 2iep_A Muscle-specific kinase 99.7 2.6E-16 9E-21 143.1 13.8 139 15-160 34-191 (192)
235 1moe_A Anti-CEA MAB T84.66; an 99.7 2E-16 6.7E-21 149.8 13.3 126 73-199 3-158 (240)
236 2wv3_A Neuroplastin; igcam, me 99.7 1E-15 3.5E-20 139.0 17.2 126 31-158 41-189 (190)
237 1nfd_E H57 FAB; complex (immun 99.7 1.9E-17 6.5E-22 153.5 5.3 128 78-205 6-158 (212)
238 1qok_A MFE-23 recombinant anti 99.7 8.9E-16 3E-20 148.9 17.2 123 74-198 29-197 (282)
239 2v5t_A NCAM2, N-CAM 2, neural 99.7 3.5E-16 1.2E-20 141.9 13.3 148 6-159 21-188 (189)
240 3omz_A Human vdelta1 gamma del 99.7 2.4E-16 8.2E-21 151.0 12.8 129 71-199 2-174 (259)
241 3bkj_L WO2 IGG2A FAB fragment 99.7 7.1E-17 2.4E-21 154.0 9.0 134 71-204 34-194 (252)
242 3knb_B Obscurin-like protein 1 99.7 3.8E-16 1.3E-20 126.2 12.0 92 69-160 11-106 (107)
243 1svz_A Immunoglobulin;, single 99.7 4.2E-16 1.4E-20 148.2 14.3 126 73-199 3-166 (247)
244 3eow_R Poliovirus receptor; im 99.7 1.3E-17 4.3E-22 155.8 3.5 123 77-201 5-156 (221)
245 1pz5_B Heavy chain of FAB (SYA 99.7 1.3E-16 4.6E-21 148.7 10.3 126 76-201 5-166 (220)
246 2j6e_L IGM, FAB light chain; a 99.7 4.8E-17 1.6E-21 153.3 7.2 132 72-204 21-179 (234)
247 2x1w_L Vascular endothelial gr 99.7 8.9E-16 3E-20 142.2 15.6 144 15-163 35-210 (213)
248 2c5d_C AXL oncogene, tyrosine- 99.7 7.6E-16 2.6E-20 140.5 14.7 108 47-157 67-191 (195)
249 3ux9_B SCFV antibody; five hel 99.7 3.6E-16 1.2E-20 149.5 13.0 124 75-199 6-173 (256)
250 2yd1_A Tyrosine-protein phosph 99.7 1.2E-15 4E-20 141.3 16.0 140 14-160 32-201 (212)
251 2znx_A SCFV; fluorotryptohpan, 99.7 6.3E-16 2.2E-20 146.3 14.4 126 73-199 3-161 (242)
252 1epf_A NCAM, protein (neural c 99.7 6.9E-16 2.4E-20 140.3 14.1 145 7-157 22-189 (191)
253 3mtr_A N-CAM-1, NCAM-1, neural 99.7 2E-15 6.7E-20 140.1 16.8 111 69-184 17-134 (215)
254 2a38_A Titin; Z1Z2, structural 99.7 1.7E-15 5.9E-20 137.9 16.0 111 48-158 63-194 (194)
255 3l5i_A Interleukin-6 receptor 99.7 8.4E-16 2.9E-20 149.9 14.7 177 410-631 4-185 (290)
256 2fbj_H IGA-kappa J539 FAB (hea 99.7 5.9E-16 2E-20 144.1 12.8 126 76-202 5-165 (220)
257 3bae_H WO2 IGG2A FAB fragment 99.7 3.1E-16 1E-20 147.0 10.4 126 76-201 5-171 (228)
258 2dtg_E Insulin receptor; IR ec 99.6 2.4E-16 8.2E-21 176.9 11.2 140 411-578 470-637 (897)
259 1op3_H FAB 2G12, heavy chain; 99.6 2.7E-16 9.3E-21 147.1 9.7 126 76-202 5-170 (225)
260 3o3u_N Maltose-binding peripla 99.6 6.8E-16 2.3E-20 166.4 14.2 127 79-205 374-516 (581)
261 2q7n_A Leukemia inhibitory fac 99.6 1.1E-14 3.6E-19 150.0 22.2 116 368-501 358-477 (488)
262 2yd6_A PTPRD protein; hydrolas 99.6 1.7E-15 5.9E-20 140.2 14.7 113 48-160 63-205 (212)
263 3lcy_A Titin; A-BAND, IG tande 99.6 1.7E-15 5.8E-20 138.3 14.4 131 29-159 41-196 (197)
264 2gjj_A A21 single-chain antibo 99.6 1.8E-15 6.2E-20 145.1 15.0 128 71-199 5-177 (264)
265 4dzb_B Vbeta2 (MAIT T cell rec 99.6 3.1E-16 1.1E-20 148.9 9.6 132 73-205 3-170 (246)
266 1rhf_A Tyrosine-protein kinase 99.6 2.8E-15 9.6E-20 135.0 15.3 132 14-157 28-181 (182)
267 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.2E-15 4.2E-20 142.3 13.3 129 76-204 5-171 (223)
268 3jz7_A MCAR, CAR, coxsackievir 99.6 6.2E-16 2.1E-20 143.3 11.0 122 39-160 69-213 (214)
269 2vol_A Murine IGG FC; FC, zinc 99.6 7.2E-17 2.5E-21 148.8 4.2 130 74-204 5-153 (207)
270 2j8h_A Titin, connectin; cardi 99.6 2.4E-15 8.2E-20 137.4 14.3 138 14-158 30-196 (197)
271 3knb_A Titin; IG-like, titin, 99.6 2.2E-15 7.5E-20 120.1 12.1 90 70-159 4-99 (100)
272 3bpo_C Interleukin-13 receptor 99.6 9.4E-15 3.2E-19 144.0 18.8 186 409-633 97-301 (314)
273 2gki_A Nuclease; anti-DNA anti 99.6 4.8E-15 1.7E-19 144.3 16.1 123 76-199 27-202 (291)
274 2rgs_A I, IG gamma-2B heavy ch 99.6 1.9E-16 6.5E-21 147.2 5.9 168 69-238 7-206 (218)
275 1dn0_B IGM-kappa cold agglutin 99.6 2.9E-15 1E-19 140.6 13.9 128 76-204 5-171 (232)
276 2ny1_B T-cell surface glycopro 99.6 3.1E-15 1E-19 135.1 13.2 150 4-160 12-180 (184)
277 3qib_D 2B4 beta chain; IG doma 99.6 7E-16 2.4E-20 148.7 9.2 147 58-205 8-194 (270)
278 1hxm_B Gamma-delta T-cell rece 99.6 2.3E-15 8E-20 142.4 12.5 130 72-201 2-173 (242)
279 2va4_A NCAM2, N-CAM 2, neural 99.6 5.9E-15 2E-19 134.1 14.3 137 14-158 30-192 (192)
280 2xqy_G A13-D6.3 monoclonal ant 99.6 2.4E-15 8.2E-20 143.6 11.9 129 74-202 9-171 (261)
281 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 5.8E-15 2E-19 142.1 14.3 90 71-160 15-128 (268)
282 3fku_X Neutralizing antibody F 99.6 2.2E-15 7.4E-20 145.9 11.2 125 73-199 3-178 (280)
283 3se4_A Interferon alpha/beta r 99.6 1.2E-14 4E-19 149.2 17.2 219 363-633 71-298 (414)
284 3s98_A Interferon alpha/beta r 99.6 4.4E-15 1.5E-19 145.2 13.2 178 411-633 5-191 (306)
285 3lqm_A Interleukin-10 receptor 99.6 1.3E-14 4.5E-19 132.2 15.3 173 412-633 4-187 (201)
286 3se4_A Interferon alpha/beta r 99.6 1.9E-15 6.5E-20 155.1 10.7 218 358-633 164-401 (414)
287 4ei6_B Vbeta16 XV19 type II na 99.6 2.1E-15 7.3E-20 143.0 10.1 133 72-205 3-169 (245)
288 3nl4_H Antigen binding fragmen 99.6 1.7E-15 5.8E-20 140.6 9.0 110 75-184 3-143 (215)
289 3sgj_C Human FCG3A receptor; r 99.6 5.4E-15 1.9E-19 135.6 12.2 108 48-160 54-175 (204)
290 2v9r_A Roundabout homolog 1; p 99.6 8.2E-15 2.8E-19 135.5 13.5 124 44-168 63-210 (212)
291 2c1o_A IGK-C protein; FAB frag 99.6 4E-14 1.4E-18 135.0 18.6 187 130-323 11-244 (254)
292 3nfj_J T cell receptor beta ch 99.6 3.1E-15 1.1E-19 141.9 10.6 133 73-205 3-169 (245)
293 3d85_D IL-12B, interleukin-12 99.6 9.7E-14 3.3E-18 135.0 21.3 113 368-501 184-301 (306)
294 3liz_H 4C3 monoclonal antibody 99.6 2.7E-15 9.2E-20 142.9 10.1 126 76-201 5-165 (253)
295 3k0w_A Mucosa-associated lymph 99.6 1.1E-14 3.8E-19 135.3 13.7 109 47-160 64-203 (218)
296 3bqu_C 3H6 FAB light chain; be 99.6 5.3E-16 1.8E-20 146.0 4.5 167 71-237 23-224 (233)
297 3q5y_A TCR N15 beta; IG, T cel 99.6 4.7E-15 1.6E-19 140.2 10.7 132 72-204 3-166 (240)
298 1f97_A Junction adhesion molec 99.6 8.9E-15 3E-19 135.2 12.4 151 7-159 21-207 (212)
299 3bn9_D E2 FAB heavy chain; ant 99.6 2.6E-15 9.1E-20 142.7 9.0 127 76-202 5-175 (257)
300 2cqv_A MLCK, myosin light chai 99.6 1.9E-14 6.3E-19 118.4 12.8 91 70-160 6-100 (114)
301 1fnl_A Low affinity immunoglob 99.6 1.1E-14 3.7E-19 130.2 12.3 109 46-159 52-174 (175)
302 2vr9_A Roundabout 1, ROBO; imm 99.6 1.1E-14 3.6E-19 135.4 12.7 109 51-159 72-206 (217)
303 1hng_A CD2; T lymphocyte adhes 99.6 2.5E-15 8.6E-20 134.3 8.1 139 12-157 22-174 (176)
304 1wfo_A Sidekick 2; FN3, cell a 99.6 3.1E-15 1E-19 126.4 8.0 113 486-633 3-115 (130)
305 3grw_A Fibroblast growth facto 99.6 1.6E-14 5.3E-19 136.7 13.7 116 45-160 69-219 (241)
306 3m8o_H Immunoglobulin A1 heavy 99.6 1.3E-14 4.3E-19 135.3 12.2 126 76-203 5-167 (221)
307 3d85_D IL-12B, interleukin-12 99.6 3E-14 1E-18 138.6 15.3 258 254-633 20-299 (306)
308 1c5d_H Monoclonal antibody aga 99.6 6.4E-15 2.2E-19 136.6 9.6 127 76-202 5-164 (215)
309 3pl6_D MBP peptide / T-cell re 99.6 6.4E-15 2.2E-19 141.8 9.6 134 71-205 26-191 (268)
310 1f2q_A High affinity immunoglo 99.6 1.9E-14 6.4E-19 128.8 12.0 109 47-160 50-172 (176)
311 3e0g_A Leukemia inhibitory fac 99.6 1.5E-14 5.1E-19 147.7 12.2 202 370-632 261-469 (483)
312 2ed9_A Netrin receptor DCC; tu 99.5 7.2E-15 2.5E-19 122.9 7.9 112 485-633 3-115 (124)
313 2wbj_D OB TCR; transmembrane, 99.5 2.6E-14 8.9E-19 138.3 13.0 134 71-204 24-194 (279)
314 3mj6_A Junctional adhesion mol 99.5 4.3E-14 1.5E-18 136.0 14.5 133 47-179 83-257 (268)
315 2eo9_A Roundabout homolog 1; b 99.5 1.9E-14 6.3E-19 119.2 10.3 107 70-176 7-116 (118)
316 1nbq_A JAM, junctional adhesio 99.5 8.7E-15 3E-19 135.0 9.2 143 14-157 30-207 (209)
317 1g1c_A Immunoglobulin-like dom 99.5 4.5E-14 1.6E-18 112.7 12.1 90 70-159 4-98 (99)
318 2fbo_J V1V2;, variable region- 99.5 3.4E-14 1.2E-18 135.1 13.3 111 47-157 89-250 (250)
319 3ojm_B Fibroblast growth facto 99.5 5.2E-14 1.8E-18 132.0 14.1 115 46-160 74-222 (231)
320 2edj_A Roundabout homolog 2; K 99.5 3.1E-14 1.1E-18 113.9 10.8 92 69-160 6-99 (100)
321 3r4d_A CEA-related cell adhesi 99.5 2.6E-14 9E-19 131.7 11.7 118 40-160 63-201 (208)
322 1wit_A Twitchin 18TH IGSF modu 99.5 3.9E-14 1.4E-18 111.5 10.7 88 71-158 2-93 (93)
323 3b5h_A Cervical EMMPRIN, HAB18 99.5 1.4E-13 4.9E-18 124.0 15.7 112 48-159 51-183 (184)
324 1i1c_A IGG2A, IG gamma-2A chai 99.5 4.5E-15 1.6E-19 139.6 5.9 173 63-237 8-211 (239)
325 2ifg_A High affinity nerve gro 99.5 1.5E-14 5.1E-19 144.9 10.0 111 46-160 210-346 (347)
326 2kkq_A Myotilin; unknown funct 99.5 7.3E-14 2.5E-18 114.9 12.4 92 69-160 13-110 (116)
327 1uct_A Immunoglobulin alpha FC 99.5 4.5E-14 1.5E-18 130.9 12.1 111 49-160 65-199 (218)
328 3qp3_A Titin; I-SET IG-like, s 99.5 8E-14 2.7E-18 112.2 12.1 92 69-160 6-101 (103)
329 2kdg_A Myotilin; immonoglobuli 99.5 5.9E-14 2E-18 112.3 11.2 92 69-160 3-99 (100)
330 2ckn_A Basic fibroblast growth 99.5 4.8E-14 1.6E-18 111.5 10.2 87 70-157 8-94 (95)
331 3irg_B Obscurin-like protein 1 99.5 9.9E-14 3.4E-18 112.5 12.1 93 68-160 10-106 (107)
332 2yr3_A Myosin light chain kina 99.5 4E-14 1.4E-18 113.0 9.2 91 68-158 8-99 (99)
333 1bec_A 14.3.D T cell antigen r 99.5 1.3E-13 4.6E-18 129.8 14.1 164 74-238 2-213 (238)
334 2gi7_A GPVI protein; IG-like d 99.5 3.4E-14 1.1E-18 128.1 9.4 101 45-147 49-168 (184)
335 2w59_A IGY FCU3-4; immunoglobu 99.5 5.1E-15 1.7E-19 138.8 4.0 135 71-206 12-164 (231)
336 3puc_A Titin; I-SET IG-like do 99.5 1.5E-13 5E-18 109.8 12.0 91 69-159 4-98 (99)
337 1x5i_A Neogenin; RGM binding, 99.5 4.1E-14 1.4E-18 118.2 9.1 104 490-633 2-111 (126)
338 1l6x_A Immunoglobulin gamma-1 99.5 2.1E-14 7.2E-19 132.2 8.0 166 72-238 2-198 (207)
339 3to4_D NKT vbeta2 (mouse varia 99.5 1.7E-14 5.8E-19 137.4 7.6 132 74-205 4-169 (253)
340 3p2t_A Leukocyte immunoglobuli 99.5 5E-14 1.7E-18 128.5 10.3 110 47-158 57-195 (196)
341 1u2h_A APEG-1, aortic preferen 99.5 1.6E-13 5.6E-18 109.4 11.9 90 70-159 4-98 (99)
342 3tv3_H PGT128 heavy chain, IG 99.5 3E-14 1E-18 134.3 8.6 126 76-201 5-181 (239)
343 3shs_A HOC head outer capsid p 99.5 3.6E-12 1.2E-16 115.6 21.5 235 73-318 4-278 (304)
344 1fhg_A Telokin; immunoglobulin 99.5 1.5E-13 5.2E-18 119.5 12.0 109 58-167 27-141 (154)
345 3qhz_H Human monoclonal antibo 99.5 4.5E-14 1.5E-18 132.6 9.1 126 76-201 5-173 (232)
346 1oll_A NK receptor; immune sys 99.5 6.3E-14 2.2E-18 126.8 9.2 111 46-158 55-187 (188)
347 1ypz_F T-cell receptor gamma c 99.5 6.2E-14 2.1E-18 131.3 9.4 130 74-203 4-174 (230)
348 4acp_A IG gamma-1 chain C regi 99.5 1.3E-14 4.5E-19 136.0 4.7 178 59-237 1-218 (240)
349 2ee2_A Contactin-1; neural cel 99.5 1.3E-13 4.6E-18 114.1 10.3 103 493-633 1-104 (119)
350 1jbj_A CD3 epsilon and gamma e 99.5 6E-14 2.1E-18 126.6 8.8 97 47-149 43-179 (186)
351 1vca_A VCAM-D1,2, human vascul 99.5 9.7E-14 3.3E-18 127.0 10.2 113 47-160 53-198 (202)
352 3u2s_H PG9 heavy chain; greek 99.5 7E-14 2.4E-18 132.3 9.5 127 75-201 3-182 (248)
353 3irg_A Titin; IG-like, titin, 99.5 2.4E-13 8.3E-18 108.7 11.1 90 70-159 4-99 (100)
354 1hnf_A CD2; T lymphocyte adhes 99.5 3.1E-13 1.1E-17 120.7 13.0 138 11-155 24-177 (182)
355 4f80_A Butyrophilin subfamily 99.5 1.8E-13 6E-18 128.0 11.9 112 48-159 83-213 (226)
356 3ry4_A Low affinity immunoglob 99.5 1.5E-13 5.2E-18 122.0 10.9 105 48-157 51-169 (170)
357 2e7c_A Myosin-binding protein 99.5 2.7E-13 9.3E-18 112.1 11.6 93 68-160 18-116 (118)
358 3knb_A Titin; IG-like, titin, 99.5 2.9E-13 1E-17 107.7 11.3 84 248-334 13-99 (100)
359 2d3v_A Leukocyte immunoglobuli 99.5 5.8E-14 2E-18 128.0 7.9 99 47-147 57-180 (196)
360 1wfn_A Sidekick 2; FN3, cell a 99.5 7.5E-14 2.6E-18 115.7 7.6 104 493-633 1-104 (119)
361 2dav_A SLOW MYBP-C, myosin-bin 99.5 5E-13 1.7E-17 109.5 12.3 89 71-159 7-111 (126)
362 3kvq_A Vascular endothelial gr 99.5 1.4E-13 4.7E-18 111.9 8.7 93 68-160 7-101 (108)
363 2dbj_A Proto-oncogene tyrosine 99.5 1.9E-13 6.4E-18 114.0 9.7 108 493-633 1-109 (124)
364 2pet_A Lutheran blood group gl 99.5 8.8E-14 3E-18 130.5 8.5 114 44-157 73-229 (231)
365 3mj8_L Stimulatory hamster ant 99.5 5.2E-14 1.8E-18 130.2 6.8 146 7-153 20-207 (213)
366 1v5j_A KIAA1355 protein, RSGI 99.5 7.7E-14 2.6E-18 111.5 6.8 79 534-633 15-93 (108)
367 1sy6_A T-cell surface glycopro 99.5 3.4E-14 1.2E-18 130.2 5.3 109 46-157 47-202 (204)
368 3cx2_A Myosin-binding protein 99.5 5.4E-13 1.9E-17 108.2 11.7 89 70-158 3-107 (108)
369 3knb_B Obscurin-like protein 1 99.5 6E-13 2E-17 107.3 11.8 82 248-334 21-105 (107)
370 2dm2_A Palladin; beta-sandwich 99.5 2.5E-13 8.5E-18 110.7 9.7 92 69-160 6-103 (110)
371 1oga_E TRBC1, T-cell receptor 99.5 3.7E-13 1.3E-17 128.0 12.3 134 72-206 4-169 (252)
372 4i0k_A CD276 antigen; immunogl 99.5 1.1E-12 3.9E-17 122.0 15.4 113 47-160 71-207 (222)
373 3lb6_C IL-13, interleukin-13 r 99.4 2E-12 6.8E-17 130.2 18.2 185 409-631 31-225 (380)
374 3bp6_B Programmed cell death 1 99.4 1.1E-12 3.8E-17 120.1 14.6 143 248-394 10-194 (202)
375 2yuz_A Myosin-binding protein 99.4 2.3E-13 7.7E-18 108.4 8.5 87 70-160 6-96 (100)
376 1ugn_A LIR1, leukocyte immunog 99.4 5.4E-13 1.9E-17 121.8 12.2 111 46-158 56-197 (198)
377 1nct_A Titin; cell adhesion, g 99.4 1.1E-13 3.6E-18 111.9 6.5 90 69-158 12-105 (106)
378 2if7_A SLAM family member 6; N 99.4 2E-12 6.9E-17 117.3 15.8 105 40-153 62-186 (193)
379 2aty_A Complement receptor chi 99.4 4.2E-13 1.4E-17 135.5 12.0 128 76-204 172-318 (376)
380 4frw_A Poliovirus receptor-rel 99.4 2.9E-13 9.9E-18 125.4 10.0 113 47-159 78-211 (218)
381 2dm3_A KIAA0992 protein, palla 99.4 1.8E-13 6.2E-18 111.6 7.6 92 69-160 7-103 (110)
382 1iam_A ICAM-1, CD54, intercell 99.4 2.1E-12 7E-17 114.0 14.7 123 74-204 2-131 (185)
383 3n1f_C Cell adhesion molecule- 99.4 4.2E-13 1.4E-17 107.1 9.2 84 534-633 12-95 (102)
384 3n9g_H FAB fragment of MAB CR4 99.4 5.2E-13 1.8E-17 125.0 11.3 121 76-196 5-164 (230)
385 1b6u_A KIR2DL3, P58 killer cel 99.4 2.2E-13 7.5E-18 129.2 8.7 145 47-198 61-238 (257)
386 2edn_A Myosin-binding protein 99.4 1.7E-13 5.9E-18 110.9 6.6 90 71-160 12-117 (118)
387 2bk8_A Connectin, M1, titin he 99.4 1.3E-12 4.5E-17 103.6 11.7 87 73-159 3-94 (97)
388 1wwb_X Protein (brain derived 99.4 4.2E-13 1.4E-17 107.6 8.7 90 68-160 1-99 (103)
389 3sbw_C Programmed cell death 1 99.4 5.7E-13 1.9E-17 124.1 10.9 113 48-160 80-212 (222)
390 1wj3_A KIAA1496 protein; beta 99.4 3.2E-13 1.1E-17 110.9 8.1 102 493-633 1-102 (117)
391 1waa_A Titin; metal binding pr 99.4 9E-13 3.1E-17 103.1 10.3 85 70-159 4-92 (93)
392 2crm_A Fibronectin type-III do 99.4 5.2E-13 1.8E-17 110.7 9.4 104 493-633 1-105 (120)
393 1x3d_A Fibronectin type-III do 99.4 1.9E-13 6.6E-18 113.0 6.7 103 493-633 1-103 (118)
394 1mq8_A ICAM-1, intercellular a 99.4 9.7E-14 3.3E-18 133.1 5.2 156 49-205 51-234 (291)
395 3v6o_A Leptin receptor; recept 99.4 2.9E-12 9.8E-17 117.3 14.8 181 412-633 3-197 (206)
396 2haz_A N-CAM 1, neural cell ad 99.4 3.2E-13 1.1E-17 108.8 7.4 82 534-633 14-96 (105)
397 1p6f_A NKP46, natural cytotoxi 99.4 5.9E-13 2E-17 125.2 10.2 114 46-161 58-193 (242)
398 1he7_A High affinity nerve gro 99.4 9.6E-13 3.3E-17 107.7 10.0 76 85-160 14-100 (126)
399 1wis_A KIAA1514 protein; FNIII 99.4 4.7E-13 1.6E-17 111.6 8.3 102 409-513 17-123 (124)
400 3d9a_L Light chain of hyhel10 99.4 3.7E-13 1.3E-17 124.5 8.4 109 40-148 60-202 (213)
401 1gxe_A Myosin binding protein 99.4 4.5E-13 1.5E-17 113.2 8.2 81 78-158 25-138 (139)
402 2e7h_A Ephrin type-B receptor 99.4 5E-13 1.7E-17 108.6 8.1 92 506-633 3-94 (109)
403 3bfo_A Mucosa-associated lymph 99.4 1.4E-12 4.9E-17 102.0 10.4 85 70-159 2-87 (91)
404 2edx_A Protein tyrosine phosph 99.4 1.2E-12 4.3E-17 110.9 10.8 107 493-633 1-109 (134)
405 2djs_A Ephrin type-B receptor 99.4 3.3E-13 1.1E-17 109.6 6.9 91 506-633 3-93 (108)
406 3caf_A Fibroblast growth facto 99.4 9.3E-13 3.2E-17 105.2 9.4 88 70-157 3-99 (100)
407 1ypz_E T cell receptor delta, 99.4 3.3E-12 1.1E-16 117.2 14.3 158 74-236 4-197 (207)
408 1x5f_A Neogenin; RGM binding, 99.4 1.3E-12 4.4E-17 108.4 10.4 96 503-633 10-105 (120)
409 2zg1_A Sialic acid-binding IG- 99.4 1.8E-12 6.3E-17 119.8 12.3 113 40-157 69-213 (214)
410 3f7q_A Integrin beta-4, GP150; 99.4 2.7E-12 9.1E-17 120.5 13.5 146 357-517 58-208 (234)
411 2p1y_A Bispecific alpha/beta T 99.4 2E-12 6.7E-17 121.9 12.6 134 13-146 24-222 (238)
412 2cr3_A Basic fibroblast growth 99.4 6.6E-13 2.3E-17 105.8 7.8 84 76-160 8-91 (99)
413 3s35_X Vascular endothelial gr 99.4 2.3E-12 7.9E-17 107.2 11.4 94 76-170 13-120 (122)
414 1x4z_A Biregional cell adhesio 99.4 1.4E-12 4.8E-17 108.2 9.9 96 504-633 11-106 (121)
415 1axi_B HGHBP, growth hormone r 99.4 1.4E-12 4.7E-17 121.9 10.8 182 409-632 29-226 (236)
416 1va9_A DOWN syndrome cell adhe 99.4 1.6E-12 5.4E-17 108.2 9.9 101 503-633 7-108 (122)
417 1x4x_A Fibronectin type-III do 99.4 6.6E-12 2.2E-16 101.2 13.3 100 408-514 6-105 (106)
418 2edb_A Netrin receptor DCC; tu 99.4 1.5E-12 5.1E-17 106.8 9.4 90 504-632 10-100 (116)
419 1x4z_A Biregional cell adhesio 99.4 1.4E-11 4.6E-16 102.2 15.3 101 409-512 17-119 (121)
420 3nl4_L Antigen binding fragmen 99.4 1E-12 3.6E-17 121.4 9.5 104 40-143 60-198 (213)
421 1lk3_L 9D7 light chain; antige 99.4 1.4E-12 4.8E-17 120.2 10.2 109 40-148 59-201 (210)
422 2dn7_A Receptor-type tyrosine- 99.4 9.2E-13 3.1E-17 106.7 7.9 79 534-633 14-92 (107)
423 2lu7_A Obscurin-like protein 1 99.4 6.4E-13 2.2E-17 101.5 6.5 79 77-160 2-84 (84)
424 2dlh_A Receptor-type tyrosine- 99.4 4.2E-13 1.4E-17 111.6 5.9 105 493-633 1-106 (121)
425 4hwu_A Fibroblast growth facto 99.4 1.3E-12 4.4E-17 103.2 8.4 84 75-160 5-88 (95)
426 1uem_A KIAA1568 protein; immun 99.4 5.7E-12 1.9E-16 103.9 12.6 103 408-513 14-116 (117)
427 1x5x_A Fibronectin type-III do 99.4 6.9E-12 2.4E-16 101.8 12.8 102 409-514 7-108 (109)
428 1x5g_A Neogenin; RGM binding, 99.4 1.1E-12 3.6E-17 108.1 8.0 99 495-633 1-101 (116)
429 2ic2_A CG9211-PA, GH03927P; IH 99.4 1.5E-12 5.2E-17 106.2 8.7 84 535-633 11-101 (115)
430 1x5z_A Receptor-type tyrosine- 99.4 1E-12 3.4E-17 108.1 7.6 100 493-633 1-100 (115)
431 1wis_A KIAA1514 protein; FNIII 99.4 8E-13 2.7E-17 110.1 7.0 97 506-633 13-109 (124)
432 4doh_B Interleukin-20 receptor 99.4 4E-11 1.4E-15 109.2 18.8 176 411-633 8-192 (206)
433 1x3d_A Fibronectin type-III do 99.4 4.9E-12 1.7E-16 104.4 11.6 101 409-514 17-117 (118)
434 1gl4_B Basement membrane-speci 99.4 4.5E-12 1.5E-16 100.7 10.9 83 75-158 14-97 (98)
435 3eow_R Poliovirus receptor; im 99.4 1.9E-12 6.4E-17 120.4 10.1 108 47-155 77-208 (221)
436 1x5l_A Ephrin type-A receptor 99.4 8.9E-13 3.1E-17 107.6 6.9 93 504-633 4-96 (111)
437 2yrz_A Integrin beta-4; GP150, 99.4 7.4E-13 2.5E-17 109.4 6.4 94 503-633 10-103 (118)
438 2v9t_A Roundabout homolog 1; s 99.4 2.5E-12 8.5E-17 106.1 9.5 93 68-160 6-110 (117)
439 3lb6_C IL-13, interleukin-13 r 99.4 2.1E-12 7E-17 130.1 10.8 179 409-633 136-324 (380)
440 1uen_A KIAA0343 protein; immun 99.4 1.2E-12 4.3E-17 109.4 7.7 104 503-633 6-110 (125)
441 1x5h_A Neogenin; RGM binding, 99.4 1.1E-12 3.9E-17 110.8 7.5 106 493-633 1-107 (132)
442 1x4x_A Fibronectin type-III do 99.4 1E-12 3.5E-17 106.0 6.8 89 506-633 3-91 (106)
443 3tv3_L PGT128 light chain, IG 99.3 5E-13 1.7E-17 123.4 5.6 114 40-153 57-205 (211)
444 1nqb_A Single-chain antibody f 99.3 3.5E-12 1.2E-16 121.5 11.6 121 40-160 66-234 (256)
445 1ow0_A IG alpha-1 chain C regi 99.3 1.1E-13 3.9E-18 127.9 1.0 165 71-238 3-201 (214)
446 1x5y_A Myosin binding protein 99.3 7.3E-12 2.5E-16 102.0 11.6 102 408-512 7-109 (111)
447 2ed8_A Netrin receptor DCC; tu 99.3 2.1E-12 7.2E-17 104.3 8.2 77 534-633 15-91 (106)
448 2kbg_A N-CAM 2, neural cell ad 99.3 1.7E-12 5.8E-17 104.7 7.6 84 421-509 19-102 (114)
449 3umt_A SCFV heavy chain and li 99.3 2.8E-12 9.5E-17 122.3 10.5 121 40-160 68-246 (256)
450 3m45_A Cell adhesion molecule 99.3 5E-12 1.7E-16 102.6 10.5 91 69-160 4-107 (108)
451 1nfd_E H57 FAB; complex (immun 99.3 2.2E-13 7.4E-18 125.9 2.6 109 40-148 58-201 (212)
452 3mlr_H Human monoclonal anti-H 99.3 2E-12 6.7E-17 120.7 9.1 121 76-196 5-165 (226)
453 3sob_H Antibody heavy chain, l 99.3 2.9E-12 9.8E-17 122.1 10.5 120 77-196 29-190 (256)
454 2lvc_A Obscurin-like protein 1 99.3 2.5E-12 8.6E-17 99.8 8.2 83 70-157 3-91 (91)
455 3sob_L Antibody light chain; b 99.3 1.2E-12 4.2E-17 123.1 7.8 110 39-148 82-225 (237)
456 3r06_A Anti-mouse CD3epsilon a 99.3 1.5E-12 5.2E-17 120.3 8.3 110 39-148 59-202 (213)
457 1bpv_A Titin, A71, connectin; 99.3 1E-12 3.5E-17 106.6 6.0 81 534-633 18-99 (112)
458 1x5y_A Myosin binding protein 99.3 2.4E-12 8.3E-17 104.9 8.2 81 534-633 16-96 (111)
459 2dru_A Chimera of CD48 antigen 99.3 6.2E-12 2.1E-16 112.4 11.6 107 40-154 60-176 (180)
460 2e3v_A Neural cell adhesion mo 99.3 1.8E-12 6.1E-17 107.6 7.5 82 534-633 15-97 (122)
461 4doh_R Interleukin-20 receptor 99.3 1.3E-11 4.4E-16 113.7 14.1 180 412-633 11-205 (221)
462 1wf5_A Sidekick 2 protein; FNI 99.3 3.4E-12 1.2E-16 106.0 9.2 99 410-513 18-120 (121)
463 3qib_D 2B4 beta chain; IG doma 99.3 6.5E-12 2.2E-16 120.8 12.4 183 130-323 3-244 (270)
464 2crm_A Fibronectin type-III do 99.3 2.1E-11 7.2E-16 100.9 13.8 101 409-513 17-118 (120)
465 1uey_A KIAA0343 protein; immun 99.3 6.7E-12 2.3E-16 105.1 10.9 105 410-517 17-122 (127)
466 2crz_A Fibronectin type-III do 99.3 1.4E-11 4.8E-16 100.1 12.5 102 408-514 7-109 (110)
467 2dm7_A KIAA1556 protein; beta- 99.3 5.6E-12 1.9E-16 102.2 10.1 94 70-169 7-104 (108)
468 2edd_A Netrin receptor DCC; tu 99.3 6.2E-12 2.1E-16 104.1 10.4 79 534-633 26-108 (123)
469 1q0x_L FAB 9B1, light chain; a 99.3 4.1E-12 1.4E-16 117.2 10.4 113 40-152 62-208 (212)
470 2ed7_A Netrin receptor DCC; tu 99.3 1.9E-12 6.3E-17 107.2 7.1 94 504-633 11-104 (119)
471 2ede_A Netrin receptor DCC; tu 99.3 4.1E-12 1.4E-16 104.2 9.1 82 534-633 16-99 (114)
472 1x44_A Myosin-binding protein 99.3 5.4E-12 1.8E-16 101.3 9.6 85 71-160 7-97 (103)
473 2xzc_L FAB A.17 light chain; i 99.3 2.2E-12 7.5E-17 119.5 8.3 109 40-148 61-204 (216)
474 3g9v_A Interleukin 22 receptor 99.3 4.1E-12 1.4E-16 116.0 9.7 180 412-633 10-204 (211)
475 3auv_A SC-DSFV derived from th 99.3 1.2E-11 4E-16 119.4 13.5 122 39-160 70-255 (276)
476 2ghw_B Anti-SARS SCFV antibody 99.3 1.2E-11 4E-16 117.3 13.2 119 40-158 68-241 (247)
477 3uzq_A Anti-dengue MAB 4E11; d 99.3 4E-12 1.4E-16 121.0 9.9 121 40-160 67-245 (253)
478 2dju_A Receptor-type tyrosine- 99.3 9.7E-12 3.3E-16 100.4 10.7 100 409-515 7-106 (106)
479 3esu_F Antibody 14B7* light ch 99.3 8.9E-12 3E-16 118.3 12.2 105 40-144 63-231 (250)
480 2ed9_A Netrin receptor DCC; tu 99.3 5.7E-12 1.9E-16 105.1 9.6 121 373-508 3-123 (124)
481 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.3 6.1E-12 2.1E-16 119.9 11.0 112 48-160 76-249 (256)
482 2yuw_A Myosin binding protein 99.3 1.1E-11 3.9E-16 100.7 11.0 101 409-512 7-108 (110)
483 1nkr_A P58-CL42 KIR; inhibitor 99.3 8.8E-12 3E-16 113.9 11.5 96 47-146 62-184 (201)
484 2yuw_A Myosin binding protein 99.3 3.2E-12 1.1E-16 104.0 7.6 81 534-633 15-95 (110)
485 2ens_A Advanced glycosylation 99.3 2.1E-12 7.1E-17 102.2 6.1 84 70-158 9-94 (96)
486 1x4y_A Biregional cell adhesio 99.3 4.5E-12 1.5E-16 103.8 8.3 84 534-633 16-99 (114)
487 1ujt_A KIAA1568 protein; fibro 99.3 6E-12 2.1E-16 103.0 8.9 92 525-633 14-105 (120)
488 3iu4_H CHP3 FAB heavy chain; a 99.3 2.1E-12 7.1E-17 123.3 7.1 121 76-196 5-163 (263)
489 2edh_A Obscurin; structural ge 99.3 1.5E-11 5.3E-16 100.5 11.4 85 70-160 18-106 (113)
490 4acp_A IG gamma-1 chain C regi 99.3 7.5E-12 2.6E-16 117.2 10.7 180 136-321 1-216 (240)
491 2edf_A Obscurin; beta-sandwich 99.3 4.8E-12 1.6E-16 101.6 8.0 86 70-160 7-96 (103)
492 3pv7_A B7-H6, IG-like domain-c 99.3 4.3E-12 1.5E-16 120.3 9.1 111 47-158 81-225 (248)
493 3so5_A LIG-3, leucine-rich rep 99.3 1.1E-11 3.7E-16 101.2 10.3 89 69-157 8-111 (112)
494 2e7h_A Ephrin type-B receptor 99.3 2.4E-11 8.3E-16 98.5 12.2 95 409-509 7-103 (109)
495 2cr6_A KIAA1556 protein, obscu 99.3 3.9E-12 1.3E-16 104.4 7.5 92 72-168 14-110 (115)
496 2yuv_A Myosin-binding protein 99.3 1.3E-11 4.3E-16 98.5 10.3 86 70-160 6-96 (100)
497 1x5g_A Neogenin; RGM binding, 99.3 7E-11 2.4E-15 97.1 15.1 100 408-514 16-115 (116)
498 2kbg_A N-CAM 2, neural cell ad 99.3 2.3E-12 7.8E-17 104.0 5.8 76 538-633 19-94 (114)
499 3ux9_B SCFV antibody; five hel 99.3 1E-11 3.6E-16 118.3 11.5 107 40-146 63-236 (256)
500 2cqv_A MLCK, myosin light chai 99.3 1.4E-11 4.8E-16 100.9 10.6 87 248-339 15-104 (114)
No 1
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.1e-42 Score=357.26 Aligned_cols=365 Identities=20% Similarity=0.336 Sum_probs=267.8
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC--CccCCC------CCeEEc---ccceEEEccCCCCCCeEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD--DGKMPT------GRAKIL---DDRSLQIENVGPQDEGLYI 139 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--~~~i~~------~~~~~~---~~~~L~i~~v~~~d~G~Y~ 139 (633)
+|.|.. +.+..+.+|+.+.|.|.+.|.|.|.|+|+|+ |..+.. ++.... ..+.|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 577766 6678899999999999999999999999999 776643 344433 2468999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceee
Q psy15127 140 CDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLG 219 (633)
Q Consensus 140 C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 219 (633)
|.|.|..|..+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..|.|.+.+.|+++|..+.....
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~-P~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~i~W~~~g~~l~~~~~----------- 146 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYA-PKFISNQTIYYSWEGNPINISCD-VKSNPPASIHWRRDKLVLPAKNT----------- 146 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEE-EEECCSCCEEEECTTCCEEEEEC-EEEESCCEEEEEETTEESSCTTC-----------
T ss_pred EEEEeCCCCcceEEEEEEEeC-CEEecCcceEEeccCCEEEEEEE-EEecCCCeEEEEECCccCCcccC-----------
Confidence 999999999999999999987 76665555445666777777776 45555566666666554432110
Q ss_pred eEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE---cc
Q psy15127 220 WLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV---TQ 296 (633)
Q Consensus 220 ~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~---~~ 296 (633)
.++.. ..
T Consensus 147 ----------------------------------------------------------------------~~~~~~~~~~ 156 (389)
T 2jll_A 147 ----------------------------------------------------------------------TNLKTYSTGR 156 (389)
T ss_dssp ----------------------------------------------------------------------TTEEEEECSS
T ss_pred ----------------------------------------------------------------------ceEEEeccCC
Confidence 01111 12
Q ss_pred CceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEE
Q psy15127 297 EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTA 376 (633)
Q Consensus 297 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a 376 (633)
...|.|.++..+|.|.|+|.|.|..|.....+.+.+.
T Consensus 157 ~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~------------------------------------------- 193 (389)
T 2jll_A 157 KMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA------------------------------------------- 193 (389)
T ss_dssp CEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEEC-------------------------------------------
T ss_pred EEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEec-------------------------------------------
Confidence 3468899999999999999998888876655444332
Q ss_pred EcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCC
Q psy15127 377 SSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQ 456 (633)
Q Consensus 377 ~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~ 456 (633)
.. |.+|..+.........+.|+|.++...+ +.++..|.++|+..+.
T Consensus 194 ----------------~~---------------P~~P~~~~~~~~~~~~~~l~w~~p~~~~--g~pi~~y~v~~~~~~~- 239 (389)
T 2jll_A 194 ----------------DV---------------PSSPYGVKIIELSQTTAKVSFNKPDSHG--GVPIHHYQVDVKEVAS- 239 (389)
T ss_dssp ----------------CC---------------CCCCEEEEEEEECSSCEEEEEECCSCCT--TSCEEEEEEEEEETTC-
T ss_pred ----------------CC---------------CCCCcceEEeeccCCEEEEEEeCCCCCC--CcceEEEEEEEEECCC-
Confidence 11 2234445555667789999999876543 5689999999998754
Q ss_pred CCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeee
Q psy15127 457 TGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELI 536 (633)
Q Consensus 457 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (633)
..|...........++|.+|.+++.|.|+|.|.|..|.|.++... .+.|....|..+|.+ ...
T Consensus 240 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~-~~~t~~~~~p~~p~~----------------~~~ 302 (389)
T 2jll_A 240 EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIE-IFQTLPVREPSPPSI----------------HGQ 302 (389)
T ss_dssp SCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCE-EEECCCCCCCCCCCE----------------EEE
T ss_pred cccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcce-EEEecCCCCCCCCcc----------------ccc
Confidence 556644443445789999999999999999999999999988765 456655533333444 556
Q ss_pred ecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeE
Q psy15127 537 PTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKY 616 (633)
Q Consensus 537 ~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y 616 (633)
..+.+++.|+|.+| .+.++.+.+| .|+|+..+... |... ....+..++++|.+|++++.|
T Consensus 303 ~~~~~~v~l~W~~p--------~~~~~~i~~Y-~v~~~~~~~~~-------~~~~----~~~~~~~~~~~i~~L~~~t~Y 362 (389)
T 2jll_A 303 PSSGKSFKLSITKQ--------DDGGAPILEY-IVKYRSKDKED-------QWLE----KKVQGNKDHIILEHLQWTMGY 362 (389)
T ss_dssp EETTTEEEEEECCC--------CCCSSCCCEE-EEEEEC------------CCBC----CEECTTCCEEEECSCCTTCEE
T ss_pred cCcCCEEEEEEECC--------CCCCCcccEE-EEEEEeCCCCc-------ceeE----eeccCCcceEEeCCcCCCCEE
Confidence 67899999999954 4678899999 99999855443 5422 123456788999999999999
Q ss_pred EEEEeccccccccccCC
Q psy15127 617 EFFLVPFFKTVEGARLD 633 (633)
Q Consensus 617 ~~~v~a~n~~g~g~~s~ 633 (633)
.|+|+|.|..|.|++|+
T Consensus 363 ~~~V~A~n~~G~s~~s~ 379 (389)
T 2jll_A 363 EVQITAANRLGYSEPTV 379 (389)
T ss_dssp EEEEEEEC-CCBCCCEE
T ss_pred EEEEEEEcCCcCCCcee
Confidence 99999999999999874
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.3e-42 Score=370.01 Aligned_cols=456 Identities=20% Similarity=0.272 Sum_probs=312.9
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEee---CceEEEcCCCC--CCeEEEEEEe------------c---CcCCe
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIF---GSVLGARGALS--DDQWKLIAKE------------A---LIKPF 73 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~------------v---~~~p~ 73 (633)
++|.+.|+|+ .+|.+...+.++++.. .++|.|.+++. +|.|+|.|.| + ..+|.
T Consensus 31 g~p~~~v~W~-------k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~ 103 (570)
T 3b43_A 31 GTPEIRIAWY-------KEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPS 103 (570)
T ss_dssp SSSSCEEEEE-------CSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCE
T ss_pred cCCCCEEEEE-------ECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCc
Confidence 3455566633 3344444455555533 25799999998 9999999998 1 24677
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeE----EcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAK----ILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
+...+.+..+.+|+.+.|.|.+.|.|.+.|+|+|+|..+..+... ......|.|.+++.+|+|.|+|.|.|..|..
T Consensus 104 ~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 183 (570)
T 3b43_A 104 FARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTA 183 (570)
T ss_dssp ESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEE
Confidence 878888888999999999999999999999999999988754322 1234689999999999999999999999998
Q ss_pred EEEEEEEEEe--eccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc--ceeeeEE---
Q psy15127 150 SLRASLTVHL--LRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR--RTLGWLR--- 222 (633)
Q Consensus 150 s~~~~l~V~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 222 (633)
+..+.|.|.. .+|.+...|....+.+|+.+.|.|. ..|.|.+.+.|++++..+.......+.... ..+.+..
T Consensus 184 ~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~-~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~ 262 (570)
T 3b43_A 184 SSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCH-VTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTK 262 (570)
T ss_dssp EEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEE-EESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCG
T ss_pred EEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEE-EEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCc
Confidence 8888888764 2366667777888899999999999 578899999999999988765443332221 2232222
Q ss_pred -EeeeEEEEeecCCCC-----------CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccc
Q psy15127 223 -VRPLYWNVARPRANL-----------NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYG 290 (633)
Q Consensus 223 -~~g~y~C~a~~~~~~-----------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~ 290 (633)
..|.|+|.|.|..+. +|.+... ......+..|+.+.|.|.+.|.|.+.+.|+++|..+... ....
T Consensus 263 ~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~-~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~--~~~~ 339 (570)
T 3b43_A 263 GDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKK-LEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES--SKFR 339 (570)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEECCBCCCEEEEC-CCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCS--SSEE
T ss_pred ccCEEEEEEEECCCCcEEEEEEEEeecCCccccc-CCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC--CcEE
Confidence 248999999998763 2222211 112234567899999999999999999999999987421 1111
Q ss_pred eEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccC------------------------CCceEEeC
Q psy15127 291 HLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVL------------------------PKGTFTLG 346 (633)
Q Consensus 291 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~------------------------p~p~~~~~ 346 (633)
.........|.|.++..+|+|.|+|.|.|..|..+.++.|.|...+.. |+|.+.|.
T Consensus 340 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~ 419 (570)
T 3b43_A 340 MSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWH 419 (570)
T ss_dssp EEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEE
T ss_pred EEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEE
Confidence 112233457999999999999999999999999999999988754321 22333332
Q ss_pred CCcccc--C--------CCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCc
Q psy15127 347 QPNLAT--G--------NSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAP 416 (633)
Q Consensus 347 ~~~~~~--g--------~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~ 416 (633)
...... + +....+.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.. ......-....+.+..+
T Consensus 420 k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~--~~~~~~~~~~~g~~~~l 497 (570)
T 3b43_A 420 KDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRF--VKKLSDISTVVGEEVQL 497 (570)
T ss_dssp ETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEE--EECCCCBCCBTTCCEEE
T ss_pred ECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcc--cccCCCceecCCCeEEE
Confidence 221111 0 01123468889999999999999999999988899998876543 11111111222222233
Q ss_pred EEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCC
Q psy15127 417 VILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGI 496 (633)
Q Consensus 417 ~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~ 496 (633)
.+.......+.+.|.... ..+. ....... .........+.|.++.+.+.+.|.|.|.|.+|...
T Consensus 498 ~c~~~g~p~~~v~W~k~~------~~~~---------~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 561 (570)
T 3b43_A 498 QATIEGAEPISVAWFKDK------GEIV---------RESDNIW-ISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQE 561 (570)
T ss_dssp EEEEESCSSCCCEEEETT------EECC---------CCTTTEE-ECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEE
T ss_pred EEEEecCCCCEEEEEeCC------eEec---------cCCCeEE-EEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEE
Confidence 333333444555554321 0000 0000110 00112345789999999999999999999999875
Q ss_pred CC
Q psy15127 497 PS 498 (633)
Q Consensus 497 ~s 498 (633)
.+
T Consensus 562 ~~ 563 (570)
T 3b43_A 562 CF 563 (570)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.1e-39 Score=346.82 Aligned_cols=358 Identities=21% Similarity=0.247 Sum_probs=265.5
Q ss_pred EEEecccCCCCCceEEe---eCceEEEcCCCC--CCeEEEEEEe---------------cCcCCeeeeCCCceEEEcCCe
Q psy15127 29 VSISGDPGFDSRRSRSI---FGSVLGARGALS--DDQWKLIAKE---------------ALIKPFPISEPSDATVLSGSV 88 (633)
Q Consensus 29 ~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~--~G~Y~C~a~~---------------v~~~p~~~~~~~~~~~~~G~~ 88 (633)
|..+|.+...+.++... ..++|.|.+++. +|.|+|.|.| ...+|.+...|....+.+|+.
T Consensus 135 W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~ 214 (570)
T 3b43_A 135 WYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGES 214 (570)
T ss_dssp EEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSC
T ss_pred EEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCe
Confidence 33344444444444332 236799999998 9999999998 134678888888888999999
Q ss_pred EEEEEEEeccCCCeEEEEeCCccCCCCC-eEE--c-ccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeecccc
Q psy15127 89 VEFVCRVGGDPLPTILWRRDDGKMPTGR-AKI--L-DDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDF 164 (633)
Q Consensus 89 ~~L~C~~~~~p~p~i~W~~~~~~i~~~~-~~~--~-~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~ 164 (633)
++|.|.+.|.|.+.|+|+|++..+..+. ... . ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+ |.+
T Consensus 215 ~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~-p~~ 293 (570)
T 3b43_A 215 GTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEP-PRF 293 (570)
T ss_dssp EEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCC-CEE
T ss_pred EEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecC-Ccc
Confidence 9999999999999999999999886543 222 1 2368999999999999999999999999999999999987 665
Q ss_pred ccCCC-ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc--ceeeeEEE----eeeEEEEeecCCCC
Q psy15127 165 RAEPK-DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR--RTLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 165 ~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
...+. ...+.+|+.+.|.|. ..|.|.+.+.|+|++..+.......+.... ..|.+..+ .|.|+|.|.|..+.
T Consensus 294 ~~~~~~~~~v~~g~~~~l~C~-~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 372 (570)
T 3b43_A 294 IKKLEPSRIVKQDEHTRYECK-IGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGS 372 (570)
T ss_dssp EECCCSBCCEESSCEEEEEEE-EESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBC
T ss_pred cccCCCccEEcCCCcEEEEEE-EeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCE
Confidence 54433 346789999999999 688999999999999998765543332221 22333332 48999999998874
Q ss_pred C-----------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCC
Q psy15127 238 N-----------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQ 306 (633)
Q Consensus 238 ~-----------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 306 (633)
. |.+.. ........+|+.+.|.|.+.|.|.|.+.|+|+|..+.. .............+|.|.++.
T Consensus 373 ~~~~~~l~V~~~P~~~~--~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~i~~v~ 448 (570)
T 3b43_A 373 ASSSTSLKVKEPPVFRK--KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRS--GKKYKIMSENFLTSIHILNVD 448 (570)
T ss_dssp CEEEEEECEECCCEECS--CCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCS--SSSEEEEEETTEEEEEECSCC
T ss_pred EEEEEEEEecCCCeeec--CCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcC--CCCEEEEEcCCEEEEEECCCC
Confidence 2 22211 12234556899999999999999999999999988742 111111111122479999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEEEeccc------------------------CCCceEEeCCCcc-cc--C------
Q psy15127 307 KEDAGFFVCSALSVAGSTTVRAFLQVREFCV------------------------LPKGTFTLGQPNL-AT--G------ 353 (633)
Q Consensus 307 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------------~p~p~~~~~~~~~-~~--g------ 353 (633)
.+|+|.|+|.|.|..|.....+.|.|...+. .|+|.+.|..... .. +
T Consensus 449 ~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~ 528 (570)
T 3b43_A 449 SADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWIS 528 (570)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEEC
T ss_pred hhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEE
Confidence 9999999999999999999888888764321 2334444433221 00 0
Q ss_pred --CCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEee
Q psy15127 354 --NSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVE 392 (633)
Q Consensus 354 --~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 392 (633)
.....+.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 529 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 529 YSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp CCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 011245788899999999999999999999999999875
No 4
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=1.3e-36 Score=332.91 Aligned_cols=420 Identities=17% Similarity=0.201 Sum_probs=283.3
Q ss_pred ceEEeeCceEEEcCCCC--CCeEEEEEEe-------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCe
Q psy15127 41 RSRSIFGSVLGARGALS--DDQWKLIAKE-------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPT 102 (633)
Q Consensus 41 ~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~ 102 (633)
|..+..+++|.|.+++. +|.|+|.+.+ |. .+|.+... ....+.+|+.+.|.|.+.+ |.+.
T Consensus 64 r~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~-p~~~ 141 (642)
T 1e07_A 64 REIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN-NSKPVEDKDAVAFTCEPET-QDAT 141 (642)
T ss_pred ceeeccCCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEcc-CceeEecCCcEEEEEECCC-CCee
Confidence 56666788999999998 9999999976 22 24555443 3456889999999999988 8899
Q ss_pred EEEEeCCccCCCCCe-EEc-ccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEeeccccccCCCceEEecCCcE
Q psy15127 103 ILWRRDDGKMPTGRA-KIL-DDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETA 179 (633)
Q Consensus 103 i~W~~~~~~i~~~~~-~~~-~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~ 179 (633)
++|+++|..+..+.. ... .++.|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|...++.+.+.+....+.+|+.+
T Consensus 142 v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~ 221 (642)
T 1e07_A 142 YLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENL 221 (642)
T ss_pred EEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEE
Confidence 999999998865433 322 3568999999999999999999998876 4677889998764555666777788999999
Q ss_pred EEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCCCCc-----ccc--------ccc
Q psy15127 180 LLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPR-----YIG--------RKM 246 (633)
Q Consensus 180 ~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~-----~~~--------~~~ 246 (633)
.|.|. ..+.|.+.+.|+++|..+.... .+.+.+... ...|.|+|.|.|..+.... +.. ...
T Consensus 222 ~l~C~-~~g~p~~~i~W~~~g~~i~~~~--~L~i~~~~~---~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~ 295 (642)
T 1e07_A 222 NLSCH-AASNPPAQYSWFVNGTFQQSTQ--ELFIPNITV---NNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS 295 (642)
T ss_pred EEEEE-cCCCCCcEEEEEECCeEcccCC--ceEEecccc---cCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEc
Confidence 99999 4899999999999998875322 222222222 2368999999997653210 000 001
Q ss_pred ceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE-ccCceEEEcCCCCCCCeEEEEEEEeCCcee-
Q psy15127 247 ASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGST- 324 (633)
Q Consensus 247 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~- 324 (633)
.....+..|+.+.|.|.+.+.| +.+.|+++|..+.. ..++.. ..++.|.|.++..+|+|.|+|.|.|..|..
T Consensus 296 ~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 369 (642)
T 1e07_A 296 NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPV-----SPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDH 369 (642)
T ss_pred CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCC-----cCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcc
Confidence 1223445678899999999986 69999999987631 123333 245689999999999999999999999874
Q ss_pred EEEEEEEEEecccC-------------------------CCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcC
Q psy15127 325 TVRAFLQVREFCVL-------------------------PKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSE 379 (633)
Q Consensus 325 ~~~~~l~v~~~~~~-------------------------p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~ 379 (633)
+..+.|.|...+.. |+|.+.|........ ....+.|.++..+|+|.|+|.|.|.
T Consensus 370 s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~ 448 (642)
T 1e07_A 370 SDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ-HTQELFISNITEKNSGLYTCQANNS 448 (642)
T ss_pred eeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcC-CCceEEEccCChhhCeEEEEEEEcC
Confidence 45567777643322 112222221111100 1134578899999999999999999
Q ss_pred CcceeEE--EEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCC
Q psy15127 380 SGETSWS--ASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQT 457 (633)
Q Consensus 380 ~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~ 457 (633)
.|....+ +.+.|...+..+.+.. ...........+.|.|..... . ..+.|...+..-
T Consensus 449 ~g~~~~s~~~~v~v~~~~~~p~i~~------------~~~~~v~~g~~v~l~C~~~~~-----~----~~i~W~~~g~~l 507 (642)
T 1e07_A 449 ASGHSRTTVKTITVSAELPKPSISS------------NNSKPVEDKDAVAFTCEPEAQ-----N----TTYLWWVNGQSL 507 (642)
T ss_pred CCCCcccceEEEEEeccCCCceEec------------CCceeecCCCeEEEEEECCCC-----C----cEEEEEECCEeC
Confidence 9877554 4455544322211110 011112245567777765421 1 123333332111
Q ss_pred C-eEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCC
Q psy15127 458 G-WVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGI 496 (633)
Q Consensus 458 ~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~ 496 (633)
. ............++|.++...+.+.|+|.|.|..|...
T Consensus 508 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 508 PVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred CCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 0 00001111245799999999999999999999999653
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=9.9e-37 Score=333.97 Aligned_cols=419 Identities=16% Similarity=0.205 Sum_probs=285.9
Q ss_pred EEEecccCCCCCceEEee-CceEEEcCCCC--CCeEEEEEEe-------------cCc-CCeeeeCCCceEEEcCCeEEE
Q psy15127 29 VSISGDPGFDSRRSRSIF-GSVLGARGALS--DDQWKLIAKE-------------ALI-KPFPISEPSDATVLSGSVVEF 91 (633)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~--~G~Y~C~a~~-------------v~~-~p~~~~~~~~~~~~~G~~~~L 91 (633)
|..+|.+...+.++.+.. ++.|.|.+++. +|.|+|.|.| +.. ++.+...|....+.+|+.++|
T Consensus 144 W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l 223 (642)
T 1e07_A 144 WWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNL 223 (642)
T ss_pred EEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEE
Confidence 444455555556665543 67899999998 9999999998 222 222344556677899999999
Q ss_pred EEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE--EEEEEEEEEeecccccc-CC
Q psy15127 92 VCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI--SLRASLTVHLLRDDFRA-EP 168 (633)
Q Consensus 92 ~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~--s~~~~l~V~~~~p~~~~-~~ 168 (633)
.|.+.+.|.+.++|+++|..+.. +..|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+++...+ .+
T Consensus 224 ~C~~~g~p~~~i~W~~~g~~i~~-------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~ 296 (642)
T 1e07_A 224 SCHAASNPPAQYSWFVNGTFQQS-------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSN 296 (642)
T ss_pred EEEcCCCCCcEEEEEECCeEccc-------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcC
Confidence 99999999999999999987743 3579999999999999999999988764 34556777664332222 23
Q ss_pred CceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE----eeeEEEEeecCCCCCCc----
Q psy15127 169 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV----RPLYWNVARPRANLNPR---- 240 (633)
Q Consensus 169 ~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~y~C~a~~~~~~~p~---- 240 (633)
....+..|+.+.|.|. ..+.| +.+.|+++|..+.......+......+.+..+ .|.|+|.|.|..+....
T Consensus 297 ~~~~~~~g~~v~l~C~-~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~ 374 (642)
T 1e07_A 297 NSNPVEDEDAVALTCE-PEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVI 374 (642)
T ss_pred CceeEecCCcEEEEEE-CCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEE
Confidence 3344556888999999 56665 69999999988865544443333444544433 58999999998764211
Q ss_pred ccc-------cccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEE
Q psy15127 241 YIG-------RKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFF 313 (633)
Q Consensus 241 ~~~-------~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 313 (633)
+.. ........+..|+.+.|.|.+.|.|.+.+.|+++|..+. ....|.|.++..+|.|.|
T Consensus 375 l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~-------------~~~~L~i~~~~~~d~G~Y 441 (642)
T 1e07_A 375 LNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ-------------HTQELFISNITEKNSGLY 441 (642)
T ss_pred EEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcC-------------CCceEEEccCChhhCeEE
Confidence 100 111223456789999999999999999999999998653 234799999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEecccCCCc---------------------------eEEeCCCcccc--C------CCCCc
Q psy15127 314 VCSALSVAGSTTVRAFLQVREFCVLPKG---------------------------TFTLGQPNLAT--G------NSDLR 358 (633)
Q Consensus 314 ~C~a~n~~g~~~~~~~l~v~~~~~~p~p---------------------------~~~~~~~~~~~--g------~p~~~ 358 (633)
+|.|.|..|....+..+.|......++| .+.|....... + .....
T Consensus 442 ~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~ 521 (642)
T 1e07_A 442 TCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRT 521 (642)
T ss_pred EEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEEcCCCcE
Confidence 9999999987765544433322122222 22232111100 0 01124
Q ss_pred eEEecccccCCEEEEEEEEcCCccee-EEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCC
Q psy15127 359 RIACDLRETDSGLYTCTASSESGETS-WSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRG 437 (633)
Q Consensus 359 ~~i~~~~~~d~g~y~c~a~n~~g~~~-~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~ 437 (633)
+.|.++..+|+|.|+|.|.|..|... ..+.|.|...|..... .|.. ........+.|.+.....
T Consensus 522 L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~-----------~~~~--~~v~~g~~~~l~C~~~g~-- 586 (642)
T 1e07_A 522 LTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPII-----------SPPD--SSYLSGANLNLSCHSASN-- 586 (642)
T ss_pred EEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCccee-----------cCCc--eeEEcCCcEEEEEEeccC--
Confidence 67889999999999999999999764 4688988866543100 1111 222334567777775331
Q ss_pred CCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCC
Q psy15127 438 GGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPS 498 (633)
Q Consensus 438 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s 498 (633)
+.. .+.|...+.. ......+.|.++.+.+.+.|+|.|.|..|....+
T Consensus 587 ----p~p--~v~W~~~g~~--------i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s 633 (642)
T 1e07_A 587 ----PSP--QYSWRINGIP--------QQHTQVLFIAKITPNNNGTYACFVSNLATGRNNS 633 (642)
T ss_pred ----CCC--eEEEEECCEE--------CccCceEEECcccccCCeEEEEEEEecccCccee
Confidence 111 3444444311 1123578999999999999999999999987544
No 6
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=3e-36 Score=339.47 Aligned_cols=430 Identities=21% Similarity=0.264 Sum_probs=297.5
Q ss_pred CCceEEeeCceEEEcCCCC--C-CeEEEEEEe----------------c-----CcCCeeeeCC--CceEEEcCCeEEEE
Q psy15127 39 SRRSRSIFGSVLGARGALS--D-DQWKLIAKE----------------A-----LIKPFPISEP--SDATVLSGSVVEFV 92 (633)
Q Consensus 39 ~~~~~~~~~~~L~i~~v~~--~-G~Y~C~a~~----------------v-----~~~p~~~~~~--~~~~~~~G~~~~L~ 92 (633)
..|+.+..+|+|.|.+++. + |.|+|.+.+ + ..+|.+...+ ....+.+|+.+.|.
T Consensus 190 ~~r~~~~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~ 269 (816)
T 3dmk_A 190 DGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALL 269 (816)
T ss_dssp TTTEEECTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEEC
T ss_pred CceEEEecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEE
Confidence 4577788899999999999 7 999999986 0 0123332221 24578899999999
Q ss_pred EEEeccCCCeEEEEeCCccCC------CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeecccccc
Q psy15127 93 CRVGGDPLPTILWRRDDGKMP------TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRA 166 (633)
Q Consensus 93 C~~~~~p~p~i~W~~~~~~i~------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~ 166 (633)
|.+.|.|.|.+.|+|++.... ........+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+ +.+..
T Consensus 270 C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~-~~~~~ 348 (816)
T 3dmk_A 270 CPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP-LSAKI 348 (816)
T ss_dssp CCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE-EEEEE
T ss_pred EEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCC-Cceee
Confidence 999999999999999654321 22223334679999999999999999999999999888899999887 67777
Q ss_pred CCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCCC--------
Q psy15127 167 EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANLN-------- 238 (633)
Q Consensus 167 ~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~-------- 238 (633)
.+....+.+|+.+.|.|. ..+.|.+.+.|+++|..+.... ..+.+.+..... .|.|+|.+.|..+..
T Consensus 349 ~~~~~~v~~G~~v~l~C~-~~g~p~~~v~W~k~g~~~~~~~-~~L~i~~v~~~d---~G~Y~C~a~n~~g~~~~~~~l~v 423 (816)
T 3dmk_A 349 DPPTQTVDFGRPAVFTCQ-YTGNPIKTVSWMKDGKAIGHSE-SVLRIESVKKED---KGMYQCFVRNDRESAEASAELKL 423 (816)
T ss_dssp ESSEEECCTTSCEEEEEE-EEEECCCEEEEEETTEECSCCS-SEEEESSCCGGG---CEEEEEEEECSSCEEEECCEEEC
T ss_pred CCCceEecCCCCEEEEEE-EeccCCCEEEEEECCEECCCCC-CEEEEcCCCHHH---CEEEEEEEECCCCcEEEEEEEEE
Confidence 788888999999999999 5788999999999999886542 233333333322 589999999876521
Q ss_pred ------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccce-EEEccC----ceEEEcCCCC
Q psy15127 239 ------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGH-LHVTQE----GTLRIQGVQK 307 (633)
Q Consensus 239 ------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~~----~~l~i~~~~~ 307 (633)
|.+. .......+..|+.+.|.|.+.|.|.+.+.|+++|..+.... .... .....+ ..|.|.++..
T Consensus 424 ~~~~~~p~i~--~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~--~~~~~~~~~~~~~~~~~L~i~~v~~ 499 (816)
T 3dmk_A 424 GGRFDPPVIR--QAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANND--RYQVGQYVTVNGDVVSYLNITSVHA 499 (816)
T ss_dssp CCSSCCCEEE--EECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCT--TEEEEEEECTTSCEEEEEEESSCCT
T ss_pred ccccCCCceE--ecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCC--CcccccEEecCCCcEEEEEEeeccc
Confidence 1111 11222456789999999999999999999999998774211 1100 011112 2599999999
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEEEecccC-----------------------CCceEEeCCCcccc--C-----CCCC
Q psy15127 308 EDAGFFVCSALSVAGSTTVRAFLQVREFCVL-----------------------PKGTFTLGQPNLAT--G-----NSDL 357 (633)
Q Consensus 308 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~-----------------------p~p~~~~~~~~~~~--g-----~p~~ 357 (633)
+|+|.|+|.|.|..|....++.|.|...+.. |.+.+.|....... + .+..
T Consensus 500 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~ 579 (816)
T 3dmk_A 500 NDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG 579 (816)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTS
T ss_pred cCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCC
Confidence 9999999999999999999999988754322 22233332222111 0 0123
Q ss_pred ceEEeccc-ccCCEEEEEEEEcCCcce-eEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCC
Q psy15127 358 RRIACDLR-ETDSGLYTCTASSESGET-SWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEP 435 (633)
Q Consensus 358 ~~~i~~~~-~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~ 435 (633)
.+.|.++. .+|+|.|+|.|.|..|.. +..+.+.|..+|... +..+... .......+.|.|.....
T Consensus 580 ~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~-----------~~~~~~~--~~~~G~~v~L~C~~~~~ 646 (816)
T 3dmk_A 580 TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRII-----------PFAFEEG--PAQVGQYLTLHCSVPGG 646 (816)
T ss_dssp EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCB-----------CCCCCSS--CEESSCEEEEEEBCCCS
T ss_pred eEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccc-----------ccccccc--ccCCCCeEEEEEEEeCC
Confidence 45777887 589999999999999964 456677777655431 1111111 12346678888876531
Q ss_pred CCCCCcceeEEEEEEEEecCCC----CeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCC
Q psy15127 436 RGGGVAPVIGYTVEYFSSDLQT----GWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPS 498 (633)
Q Consensus 436 ~~~~~~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s 498 (633)
. .+. .+.|...+..- .............++|.++.....+.|+|.|.|..|....+
T Consensus 647 ~----~~~---~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 706 (816)
T 3dmk_A 647 D----LPL---NIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFT 706 (816)
T ss_dssp S----SCC---EEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred C----CCC---EEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEE
Confidence 1 121 24444443211 12211112234679999999999999999999999987543
No 7
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=5.5e-37 Score=345.49 Aligned_cols=425 Identities=19% Similarity=0.273 Sum_probs=292.4
Q ss_pred eeCceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc
Q psy15127 45 IFGSVLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG 110 (633)
Q Consensus 45 ~~~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~ 110 (633)
..+++|.|.+++. +|.|+|.|.| +..+|.+...+....+.+|+.++|.|.+.+.|.+.++|+|+|.
T Consensus 303 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~ 382 (816)
T 3dmk_A 303 QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGK 382 (816)
T ss_dssp EETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTE
T ss_pred eccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCE
Confidence 3468999999998 9999999988 4556677777888889999999999999999999999999999
Q ss_pred cCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEe--eccccccCCCceEEecCCcEEEEEeCCCC
Q psy15127 111 KMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHL--LRDDFRAEPKDTRVASGETALLECGPPKG 188 (633)
Q Consensus 111 ~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 188 (633)
.+... ++.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. .+|.+...+....+.+|+.+.|.|. ..|
T Consensus 383 ~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~-~~g 455 (816)
T 3dmk_A 383 AIGHS------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCV-AGG 455 (816)
T ss_dssp ECSCC------SSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEE-EEC
T ss_pred ECCCC------CCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEE-Eec
Confidence 88653 35899999999999999999999999887777777753 3366666777788999999999999 688
Q ss_pred CCCCeEEEEECCEEeccCCCeeEEe----ccc---eeeeEE----EeeeEEEEeecCCCCCCcc---c-----cccccee
Q psy15127 189 QPEPTLHWKKNGQFIDLESSKSLDL----SRR---TLGWLR----VRPLYWNVARPRANLNPRY---I-----GRKMASL 249 (633)
Q Consensus 189 ~p~~~i~W~~~~~~~~~~~~~~~~~----~~~---~~~~~~----~~g~y~C~a~~~~~~~p~~---~-----~~~~~~~ 249 (633)
.|.+.+.|+++|..+.......... ... .+.+.. ..|.|+|.|.|..+..... . .......
T Consensus 456 ~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~ 535 (816)
T 3dmk_A 456 NPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEK 535 (816)
T ss_dssp SSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCC
T ss_pred CCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCC
Confidence 9999999999999886554332211 111 122111 2489999999987632100 0 0011122
Q ss_pred EEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCC-CCCCeEEEEEEEeCCcee-EEE
Q psy15127 250 LIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQ-KEDAGFFVCSALSVAGST-TVR 327 (633)
Q Consensus 250 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~~-~~~ 327 (633)
..+..|+.+.|.|.+.|.|.+.+.|+++|..+. ...+.....+++|.|.++. .+|+|.|+|.|.|..|.. +..
T Consensus 536 ~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~-----~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~ 610 (816)
T 3dmk_A 536 KAIVAGETLIVTCPVAGYPIDSIVWERDNRALP-----INRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGS 610 (816)
T ss_dssp EEEETTCCEEEECCEECSSEEEEEEEETTEESC-----CSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEE
T ss_pred eEEecCCeEEEEEEecCCCCCEEEEEECCeEcc-----cCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeee
Confidence 455689999999999999999999999998774 2234455677899999998 589999999999999854 455
Q ss_pred EEEEEEecccCC--------------------------CceEEeCCCcccc-----------CCCCCceEEecccccCCE
Q psy15127 328 AFLQVREFCVLP--------------------------KGTFTLGQPNLAT-----------GNSDLRRIACDLRETDSG 370 (633)
Q Consensus 328 ~~l~v~~~~~~p--------------------------~p~~~~~~~~~~~-----------g~p~~~~~i~~~~~~d~g 370 (633)
..+.|...+... ++.+.|....... +.....+.|.++..+|+|
T Consensus 611 ~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 690 (816)
T 3dmk_A 611 LEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAG 690 (816)
T ss_dssp EEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCE
T ss_pred EEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCE
Confidence 666665432211 1133332222111 111234588999999999
Q ss_pred EEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEE
Q psy15127 371 LYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEY 450 (633)
Q Consensus 371 ~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~ 450 (633)
.|+|.|.|..|..+.++.|.|..+|... ..........+....+.+.........+.|....... +.. |.
T Consensus 691 ~Y~C~a~N~~g~~~~~~~l~V~~~P~~~--~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~----~~~-~~--- 760 (816)
T 3dmk_A 691 NFTCHARNLAGHQQFTTPLNVYVPPRWI--LEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDT----PGE-YK--- 760 (816)
T ss_dssp EEEEEEECSSCEEEEEEEECEEEEEEEE--ECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSS----TTC-CB---
T ss_pred EEEEEEEeCCccEEEEEEEEEEeCCcee--eecccceecCCCcEEEEEEEecCCCCeEEEEecCCCC----Ccc-cc---
Confidence 9999999999999989999988765420 0000000111111122222222233345554322110 000 00
Q ss_pred EEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCC
Q psy15127 451 FSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIP 497 (633)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~ 497 (633)
.. ..... .......+.|.++...+.+.|+|.|.|.+|.+..
T Consensus 761 -~~-~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 801 (816)
T 3dmk_A 761 -DL-KKSDN----IRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLS 801 (816)
T ss_dssp -CC-CCBTT----EEEETTEEEECSCCGGGCEEEEEEEECSSSSCEE
T ss_pred -cc-ccCCC----EEecCCEEEECcCChhhCeEEEEEEEeCCCCCcE
Confidence 00 00000 1123457999999999999999999999998753
No 8
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=314.89 Aligned_cols=336 Identities=11% Similarity=0.007 Sum_probs=219.7
Q ss_pred eEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCC-CceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC
Q psy15127 49 VLGARGALS--DDQWKLIAKE----------ALIKPFPISEP-SDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG 115 (633)
Q Consensus 49 ~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~-~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~ 115 (633)
+|.|.+++. +|.|+|.|.| +...|.+...+ .......|+.+.|.|.+.|.|.|.|+|++++..+...
T Consensus 104 SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~ 183 (527)
T 3qs9_E 104 SMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESC 183 (527)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------
T ss_pred EEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccc
Confidence 499999999 9999999998 12222222221 2233456788899999999999999999988765321
Q ss_pred CeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEE-EEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeE
Q psy15127 116 RAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLR-ASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTL 194 (633)
Q Consensus 116 ~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~-~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 194 (633)
.......-......++..|+|.|+|.|.|..|..... +.|.|... |.+ .+....+.+|+.+.|.|.+..+.|.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~-p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i 260 (527)
T 3qs9_E 184 KEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQT-PQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGL 260 (527)
T ss_dssp ------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSC-CCC--SCCEEEECTTSCEEEEEEEEESSSCCCE
T ss_pred cccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEecc-Ccc--CCCceEEeCCCeEEEEEEEccCCCCeEE
Confidence 1111111122233456899999999999999985443 77777766 444 6667889999999999995348999999
Q ss_pred EEEECCEEeccCCCeeE--------EeccceeeeEE----EeeeEEEEeecCCC--------CCCcccccccceeEEecC
Q psy15127 195 HWKKNGQFIDLESSKSL--------DLSRRTLGWLR----VRPLYWNVARPRAN--------LNPRYIGRKMASLLIWNH 254 (633)
Q Consensus 195 ~W~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~g~y~C~a~~~~~--------~~p~~~~~~~~~~~~~~~ 254 (633)
.|++++..+........ ......|.+.. ..|.|+|.|.|... ..|.+..........+..
T Consensus 261 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~ 340 (527)
T 3qs9_E 261 TWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQ 340 (527)
T ss_dssp EEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCT
T ss_pred EEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcC
Confidence 99999987654321110 00111122222 24899999998611 112111111122355678
Q ss_pred CceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 255 PRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 255 g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
|+.+.|.|.+.|+|.|.+.|+|+|..+..... .......|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 341 G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~------~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~ 414 (527)
T 3qs9_E 341 YEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQK------GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRR 414 (527)
T ss_dssp TCCCCEEEEEEEESCCEEEEEETTEEEECBCC------BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--C
T ss_pred CCeEEEEEEEEecCCCEEEEEECCEECcCCcc------cccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 99999999999999999999999998853211 112456899999999999999999999999999998888875
Q ss_pred cc----------------cCCCceEEeCCCcccc---------------------CCCCCceEEecccccCCEEEEEEEE
Q psy15127 335 FC----------------VLPKGTFTLGQPNLAT---------------------GNSDLRRIACDLRETDSGLYTCTAS 377 (633)
Q Consensus 335 ~~----------------~~p~p~~~~~~~~~~~---------------------g~p~~~~~i~~~~~~d~g~y~c~a~ 377 (633)
.| ..|+|.+.|....... |.......+.-...+|+|.|+|.|.
T Consensus 415 ~P~i~~~~~~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~ 494 (527)
T 3qs9_E 415 KPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY 494 (527)
T ss_dssp CCEEEECCCCE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEE
T ss_pred CCeEEEeCCCCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEE
Confidence 43 3466777774322110 0001111233333569999999999
Q ss_pred cCCcceeEEEEEEeec
Q psy15127 378 SESGETSWSASLSVEP 393 (633)
Q Consensus 378 n~~g~~~~~~~l~v~~ 393 (633)
|..|..+..+.|.|.+
T Consensus 495 N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 495 NSLGTSCETILLNSPG 510 (527)
T ss_dssp CSSCEEEEEEEC----
T ss_pred eCCCCceeEEEEecCC
Confidence 9999999999987754
No 9
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=323.98 Aligned_cols=416 Identities=14% Similarity=0.098 Sum_probs=286.2
Q ss_pred CCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCC-CCeEEEEEEEeCCceEEEEEEEEEEe----e
Q psy15127 86 GSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQ-DEGLYICDVENLVGSISLRASLTVHL----L 160 (633)
Q Consensus 86 G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~-d~G~Y~C~~~n~~g~~s~~~~l~V~~----~ 160 (633)
+..+.|.|.+.|.|.|.+.|.|+|..+.... ...|.|..+... .++.|.|.+.+..|..... .+.+.. .
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~-----~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~~~~ 164 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWN-----RAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHPCTR 164 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCE-----EEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSCCSS
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCcee-----EEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeeccccc
Confidence 4589999999999999999999998764322 235666655333 3588899887777764322 222222 2
Q ss_pred ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEE-EE--ECCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 161 RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLH-WK--KNGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 161 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
+|.+. .+.+..+.+|+++.|.|. +.|.|.+.+. |+ ++|..+.....
T Consensus 165 ~p~~~-~~~~~~v~~G~~v~l~C~-~~g~P~p~i~~W~~~~~g~~l~~~~~----------------------------- 213 (731)
T 2v5y_A 165 TPHFL-RIQNVEVNAGQFATFQCS-AIGRTVAGDRLWLQGIDVRDAPLKEI----------------------------- 213 (731)
T ss_dssp SCEEC-CCCCEEEETTSCEEEEEE-EESCCCTTCEEEEEESSSCCEEEEEE-----------------------------
T ss_pred ccccc-cccceEEeCCCcEEEEEE-eCCCCCCceeEEEecCCCccccccce-----------------------------
Confidence 25554 566788999999999999 6888888777 66 45543321000
Q ss_pred CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEE
Q psy15127 238 NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 317 (633)
Q Consensus 238 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 317 (633)
..+ ...+ ..++|.|.++...|.|.|+|.|
T Consensus 214 -----------------------------------------~~~------~~~~----~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 214 -----------------------------------------KVT------SSRR----FIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp -----------------------------------------EEC------CSSE----EEEEEEECSCCTTTCEEEEEEE
T ss_pred -----------------------------------------EEe------cccc----ceEEEEEcccccccCeEEEEEE
Confidence 000 0000 1258999999999999999999
Q ss_pred EeCCce-eEEEEEEEEEecccCCCce-----------EEeCCCccccCCC----------------------CCceEEec
Q psy15127 318 LSVAGS-TTVRAFLQVREFCVLPKGT-----------FTLGQPNLATGNS----------------------DLRRIACD 363 (633)
Q Consensus 318 ~n~~g~-~~~~~~l~v~~~~~~p~p~-----------~~~~~~~~~~g~p----------------------~~~~~i~~ 363 (633)
.|..|. .+..+.|.|...+..|.+. +.|.......+.+ ...+.+.+
T Consensus 243 ~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~ 322 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGH 322 (731)
T ss_dssp EETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEECCSSEEEECS
T ss_pred ECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEeccCcceEEEeC
Confidence 999998 6777888888766654331 2333221111111 13347788
Q ss_pred ccccCCEEEEEEEE--cCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCc
Q psy15127 364 LRETDSGLYTCTAS--SESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVA 441 (633)
Q Consensus 364 ~~~~d~g~y~c~a~--n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~ 441 (633)
|...+.|.|+|.|. |..|....+..+.+...+. .++.+|..+.+...+.+++.|+|+++..... ++
T Consensus 323 L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~-----------~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~-~~ 390 (731)
T 2v5y_A 323 LDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA-----------DPMRGPRKLEVVEVKSRQITIRWEPFGYNVT-RC 390 (731)
T ss_dssp CCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC-----------CCSCCCEEEEEEEECSSCEEEEEECCCHHHH-CS
T ss_pred CCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC-----------CCCCCCceeEEEeccCCeEEEEEECCCcccc-cc
Confidence 99999999999999 9999876444444443322 2346677778888899999999999864311 25
Q ss_pred ceeEEEEEEEEecCCCC--eEE--EEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcch
Q psy15127 442 PVIGYTVEYFSSDLQTG--WVV--AAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHL 517 (633)
Q Consensus 442 ~i~~Y~v~~~~~~~~~~--~~~--~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~ 517 (633)
.+.+|.|+|+....... |.. .........++|.+|.|++.|.|+|+|.|..|.|+ |... .++|.+.+|..++..
T Consensus 391 ~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~-~~~T~~~~P~~p~~~ 468 (731)
T 2v5y_A 391 HSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQEL-IVQTDEDLPGAVPTE 468 (731)
T ss_dssp SSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCE-EEECCCCCCCCCCTT
T ss_pred eeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceE-EEEccCCCCCCCCcc
Confidence 67899999998753221 111 11223457899999999999999999999999985 6554 578888888887643
Q ss_pred HHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeec-cceeEe
Q psy15127 518 LDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEK-YNMATV 596 (633)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~-~~~~~~ 596 (633)
. + .... +.++|.|+|++| ...+|.|++| .|+|+....... .|.. .....+
T Consensus 469 ~-----------~---~~~~-~~~si~l~W~~P--------~~~~g~i~~Y-~V~~~~~~~~~~-----~~~~~~~~~~~ 519 (731)
T 2v5y_A 469 S-----------I---QGST-FEEKIFLQWREP--------TQTYGVITLY-EITYKAVSSFDP-----EIDLSNQSGRV 519 (731)
T ss_dssp T-----------C---EEEE-ETTEEEEECCCC--------SCCSSCCCEE-EEEEEEEEECC--------CCCCCEEEE
T ss_pred e-----------E---Eeee-cCCeEEEEEcCC--------CCCCCCccce-EEEEEECcCCCc-----cccccCcceEE
Confidence 0 0 2222 478999999965 4568899999 999988754321 0110 011223
Q ss_pred ecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 597 MNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 597 ~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
...+..++++|.+|+|++.|.|+|+|.|..|.|++|
T Consensus 520 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 555 (731)
T 2v5y_A 520 SKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA 555 (731)
T ss_dssp EEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE
T ss_pred eecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc
Confidence 345668899999999999999999999999999986
No 10
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.1e-34 Score=294.50 Aligned_cols=316 Identities=26% Similarity=0.371 Sum_probs=230.5
Q ss_pred cCCeeeeCCCceEE---EcCCeEEEEEEEeccCCCeEEEEeCCccCCCC--CeEEcccceEEEccC-CCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATV---LSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG--RAKILDDRSLQIENV-GPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~---~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~--~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~ 143 (633)
.+|.|...|.+..+ .+|+.+.|.|.+.|.|.|.|+|+|+|..+..+ ......++.|.|.++ +.+|+|.|+|.|.
T Consensus 4 ~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~ 83 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 83 (384)
T ss_dssp EEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEE
T ss_pred CCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEE
Confidence 35889999988876 58899999999999999999999999988643 233445677888776 7889999999999
Q ss_pred eCCceE-EEEEEEEEEeeccccc-cCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeE
Q psy15127 144 NLVGSI-SLRASLTVHLLRDDFR-AEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWL 221 (633)
Q Consensus 144 n~~g~~-s~~~~l~V~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (633)
|..|.. +..+.|.|... +.+. .......+.+|+.+.|.|....+.|.+.+.|++++..+..............+.+.
T Consensus 84 N~~G~~~s~~~~l~v~~~-~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~ 162 (384)
T 3kld_A 84 NSFGTIVSREAKLQFAYL-ENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIA 162 (384)
T ss_dssp ETTEEEECCCEEEEEEEE-CCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEES
T ss_pred cCcccEEecceEEEEecc-cccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEe
Confidence 999874 45677777776 4333 33455788999999999986566778899999999887654444333333344433
Q ss_pred EE----eeeEEEEeecCCCCC-----Cc-ccc--------------cccceeEEecCCceEEEEEEEeeecCCeeEEEEC
Q psy15127 222 RV----RPLYWNVARPRANLN-----PR-YIG--------------RKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQE 277 (633)
Q Consensus 222 ~~----~g~y~C~a~~~~~~~-----p~-~~~--------------~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~ 277 (633)
.+ .|.|+|.|.|..+.. +. +.. ........+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~ 242 (384)
T 3kld_A 163 KVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRA 242 (384)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEET
T ss_pred ecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeC
Confidence 22 489999999976521 10 000 0012234567899999999999999999999995
Q ss_pred CE-EEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc-------------------
Q psy15127 278 GS-QVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV------------------- 337 (633)
Q Consensus 278 g~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------- 337 (633)
+. .+. . .......++.|.|.++..+|+|.|+|.|.|..|.......|.|...+.
T Consensus 243 ~~~~~~-----~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~ 316 (384)
T 3kld_A 243 DGKPIA-----R-KARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWE 316 (384)
T ss_dssp TCCCCC-----T-TCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEE
T ss_pred CCcccc-----c-cceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEE
Confidence 43 332 1 112233466899999999999999999999999998888888875322
Q ss_pred -----CCCceEEeCCCccccC-C-----CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEee
Q psy15127 338 -----LPKGTFTLGQPNLATG-N-----SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVE 392 (633)
Q Consensus 338 -----~p~p~~~~~~~~~~~g-~-----p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 392 (633)
.|.|.+.|........ . ....+.|..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 317 C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 317 CKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp CEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 2344455533222110 0 11245788999999999999999999999999999885
No 11
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4.9e-35 Score=312.41 Aligned_cols=348 Identities=11% Similarity=0.004 Sum_probs=242.9
Q ss_pred eeCceEEEcCCCC--CCeEEEEEEe---------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe-CCccC
Q psy15127 45 IFGSVLGARGALS--DDQWKLIAKE---------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR-DDGKM 112 (633)
Q Consensus 45 ~~~~~L~i~~v~~--~G~Y~C~a~~---------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~-~~~~i 112 (633)
..+++|.|.+++. +|.|+|.|.| |..+|.+...+....+.+|+.++|.|.+.+.+.+.++|++ +|..+
T Consensus 77 ~~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l 156 (524)
T 2ec8_A 77 NKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPL 156 (524)
T ss_dssp ECSSEEEESSCCSTTCEEEEEEETTSCEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCC
T ss_pred CccceEEEcccchhhCEEEEEeecCCcceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCc
Confidence 4568899999998 9999999955 4555665577778889999999999999887778999998 78877
Q ss_pred CCCC-eEEcccceEEEccCCCCCCe-EEEEEEEeCCceE-EEEEEEEEE---eeccccccCCCceEEecCCcEEEEEeCC
Q psy15127 113 PTGR-AKILDDRSLQIENVGPQDEG-LYICDVENLVGSI-SLRASLTVH---LLRDDFRAEPKDTRVASGETALLECGPP 186 (633)
Q Consensus 113 ~~~~-~~~~~~~~L~i~~v~~~d~G-~Y~C~~~n~~g~~-s~~~~l~V~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 186 (633)
..+. .....++.|.|.+++.+|+| .|+|.|.|..+.. +..+.|.|. ..+|.+...+....+.+|+.+.|.|. .
T Consensus 157 ~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~-~ 235 (524)
T 2ec8_A 157 PKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCT-I 235 (524)
T ss_dssp CSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEE-E
T ss_pred CCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEE-E
Confidence 6543 34445779999999999999 9999999886664 457888887 23377878888889999999999999 4
Q ss_pred CCCCCCe-EEEEECCEEe--ccCCCeeE-----EeccceeeeEE----EeeeEEEEeecCCCCC-----------Ccccc
Q psy15127 187 KGQPEPT-LHWKKNGQFI--DLESSKSL-----DLSRRTLGWLR----VRPLYWNVARPRANLN-----------PRYIG 243 (633)
Q Consensus 187 ~~~p~~~-i~W~~~~~~~--~~~~~~~~-----~~~~~~~~~~~----~~g~y~C~a~~~~~~~-----------p~~~~ 243 (633)
.+.|.+. +.|++++..+ .......+ ......+.+.. ..|.|+|.|.|..+.. |.+..
T Consensus 236 ~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 315 (524)
T 2ec8_A 236 KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINI 315 (524)
T ss_dssp EESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEE
T ss_pred ecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEe
Confidence 6778775 9999999873 22111111 11112222221 2489999999987632 21111
Q ss_pred cc-cceeEEecCCceEEEEEEEeeecCCe-eEEEECCEEEEeccCCccceEEEc-------cCceEEEcCCCCCCCeEEE
Q psy15127 244 RK-MASLLIWNHPRVNRLSCFAEGSPLPS-VFWTQEGSQVLMFPGNAYGHLHVT-------QEGTLRIQGVQKEDAGFFV 314 (633)
Q Consensus 244 ~~-~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~Y~ 314 (633)
.. ......+..|+.+.|.|.+.|.|.|. +.|+++|..+.... .+.... ....|.|.++..+|+|.|+
T Consensus 316 ~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~----~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 391 (524)
T 2ec8_A 316 FPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKW----EDYPKSENESNIRYVSELHLTRLKGTEGGTYT 391 (524)
T ss_dssp EESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSB----CCEESCCSSSCCEEEEEEEECSCCGGGCEEEE
T ss_pred ecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCc----cceeEEccCCCceeEEEEEEeecCcccCeEEE
Confidence 11 12346678899999999999999998 99999998764211 122211 1247999999999999999
Q ss_pred EEEEeCCceeEEEEEEEEEecc------------------cCCCceEEeCCCcccc---------CC---------CCCc
Q psy15127 315 CSALSVAGSTTVRAFLQVREFC------------------VLPKGTFTLGQPNLAT---------GN---------SDLR 358 (633)
Q Consensus 315 C~a~n~~g~~~~~~~l~v~~~~------------------~~p~p~~~~~~~~~~~---------g~---------p~~~ 358 (633)
|.|.|..|..+.++.|.|...| ..|+|.+.|....... .+ ....
T Consensus 392 C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 471 (524)
T 2ec8_A 392 FLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGK 471 (524)
T ss_dssp EEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSC
T ss_pred EEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCc
Confidence 9999999999999888887543 3467788887653211 00 1111
Q ss_pred eE----EecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCC
Q psy15127 359 RI----ACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGP 397 (633)
Q Consensus 359 ~~----i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 397 (633)
+. +.....+|+|.|+|.|.|..|..+..+.|.|.+.+..
T Consensus 472 ~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~ 514 (524)
T 2ec8_A 472 LVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKE 514 (524)
T ss_dssp EEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC------
T ss_pred ceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHH
Confidence 22 3333469999999999999999999999999876543
No 12
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=296.47 Aligned_cols=318 Identities=12% Similarity=0.076 Sum_probs=200.1
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc---cceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD---DRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
.++..|..+.+.+|+++.|.|.+.+.|.+.|.|++++..+......... ...|.|.+++.+|+|.|+|.|.|..|..
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~ 129 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY 129 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEE
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcE
Confidence 4455566889999999999999999999999999998776542211111 1369999999999999999999999998
Q ss_pred EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCC---eeEEeccceeeeEEEeee
Q psy15127 150 SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS---KSLDLSRRTLGWLRVRPL 226 (633)
Q Consensus 150 s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 226 (633)
+..+.|.|..+ |.+. ......+..|+.+.|.|. +.|.|.|.|.|++++..+..... ..+......+ .....|.
T Consensus 130 ~~~~~l~V~~~-p~~~-~~~p~~~~~~~~~~L~C~-a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l-~~~d~G~ 205 (423)
T 3qs7_E 130 TILFTVSIRNT-LLYT-LRRPYFRKMENQDALVCI-SESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVL-HELFGTD 205 (423)
T ss_dssp EEEEEEEEC------C-EEEEEEEECSSSSCEEEE-EEESSCCEEEEEEC-------------CEEECCSEE-CCCCSSC
T ss_pred EEEEEEEEecC-cccc-ccCCcEeccCCceEEEEE-EeeecCCeEEEEECCCCCccccccccccccccceEE-ecccCeE
Confidence 88888988865 4331 122234556888999999 68999999999998875532111 1111111111 1234689
Q ss_pred EEEEeecCCCCCCc--c------cccccceeEEecCCceEEEEEEEee-ecCCeeEEEECCEEEEeccCCccceE----E
Q psy15127 227 YWNVARPRANLNPR--Y------IGRKMASLLIWNHPRVNRLSCFAEG-SPLPSVFWTQEGSQVLMFPGNAYGHL----H 293 (633)
Q Consensus 227 y~C~a~~~~~~~p~--~------~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~g~~~~~~~~~~~~~~----~ 293 (633)
|+|.|.|..+.... + ..........+.+|+.+.|.|.+.| .|.+.+.|+++|..+........... .
T Consensus 206 Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~ 285 (423)
T 3qs7_E 206 IRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT 285 (423)
T ss_dssp EEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTE
T ss_pred EEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCce
Confidence 99999998774311 0 0011223456778999999999999 67799999999986531100000000 1
Q ss_pred EccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc--------------------------CCCceEEeCC
Q psy15127 294 VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV--------------------------LPKGTFTLGQ 347 (633)
Q Consensus 294 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~--------------------------~p~p~~~~~~ 347 (633)
....+.|.|.++..+|+|.|+|.|.|. .+..+.|.|...+. .|+|.+.|..
T Consensus 286 ~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k 362 (423)
T 3qs7_E 286 MIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF 362 (423)
T ss_dssp EEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE
T ss_pred eEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE
Confidence 223347999999999999999999997 66667777764221 1223333332
Q ss_pred CccccCCCC----CceEE--ecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCC
Q psy15127 348 PNLATGNSD----LRRIA--CDLRETDSGLYTCTASSESGETSWSASLSVEPRPGP 397 (633)
Q Consensus 348 ~~~~~g~p~----~~~~i--~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 397 (633)
......... ..+.+ .....+|+|.|+|.|.|..|..+.++.|.|...|..
T Consensus 363 ~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 363 SRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp TTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred CCEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 222110000 12233 556678999999999999999999999999987655
No 13
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-33 Score=290.83 Aligned_cols=314 Identities=25% Similarity=0.356 Sum_probs=238.5
Q ss_pred ccCCCCCCCCCCccccccceeeEEEEecccCC--CCCceEEeeCceEEEcCC-----CC--CCeEEEEEEe---------
Q psy15127 6 DTNHAHPMSSPRAEIEPATRTNRVSISGDPGF--DSRRSRSIFGSVLGARGA-----LS--DDQWKLIAKE--------- 67 (633)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~i~~v-----~~--~G~Y~C~a~~--------- 67 (633)
.+.|..-...|.+.|+|+ .+|.+.. ...+.....++.|.|.++ +. +|.|+|.|.+
T Consensus 40 ~L~C~~~~~~p~~~v~W~-------k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~ 112 (403)
T 3laf_A 40 LLNCSAESDRGVPVIKWK-------KDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISR 112 (403)
T ss_dssp EECCEEECTTCCCEEEEE-------ETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECC
T ss_pred EEEEEcCCCCCCceEEEE-------ECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEE
Confidence 334444344455667744 3444433 245666777889999988 43 9999999985
Q ss_pred -----cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC----CCCeEEcccceEEEccCCCCCCeEE
Q psy15127 68 -----ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP----TGRAKILDDRSLQIENVGPQDEGLY 138 (633)
Q Consensus 68 -----v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~----~~~~~~~~~~~L~i~~v~~~d~G~Y 138 (633)
+..+|.+...+....+.+|+.+.|.|.+.+.|.+.++|+|++..+. ..+.....++.|.|.+++.+|+|.|
T Consensus 113 ~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 192 (403)
T 3laf_A 113 TAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVY 192 (403)
T ss_dssp CEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEE
T ss_pred EEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEE
Confidence 4557778888888999999999999999999999999999998873 2344555678999999999999999
Q ss_pred EEEEEeCCce-EEEEEEEEEEeec-----cccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEE
Q psy15127 139 ICDVENLVGS-ISLRASLTVHLLR-----DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLD 212 (633)
Q Consensus 139 ~C~~~n~~g~-~s~~~~l~V~~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 212 (633)
+|.+.|..+. .+..+.|.|...+ +.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+.........
T Consensus 193 ~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~~~W~~~~~~~~~~~~~~~~ 271 (403)
T 3laf_A 193 RCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECC-VSGYPPPSFTWLRGEEVIQLRSKKYSL 271 (403)
T ss_dssp EEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCE-EEEESCCEEEEEETTEECCCSSSSEEE
T ss_pred EEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEE-cCCCCCCeEEEEECCeeccCCCceEEE
Confidence 9999998776 4456777777652 12344566778899999999999 578899999999999988765555444
Q ss_pred eccceeeeEEE----eeeEEEEeecCCCCC-----------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEEC
Q psy15127 213 LSRRTLGWLRV----RPLYWNVARPRANLN-----------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQE 277 (633)
Q Consensus 213 ~~~~~~~~~~~----~g~y~C~a~~~~~~~-----------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~ 277 (633)
.....+.+..+ .|.|+|.|.|..+.. |.+. .......+..|+.++|.|.+.|.|.+.+.|+++
T Consensus 272 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~ 349 (403)
T 3laf_A 272 LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFL--NHPSNLYAYESMDIEFECAVSGKPVPTVNWMKN 349 (403)
T ss_dssp ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEE--ECCCCEECCTTCCEEECCEEEEESCCEEEEEET
T ss_pred CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEe--ecCcceEEecCCeEEEEEEEeeccCCEEEEEEC
Confidence 44444444333 489999999886632 1111 112234456789999999999999999999999
Q ss_pred CEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 278 GSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
|..+. ...+.....++.|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 350 g~~~~-----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 401 (403)
T 3laf_A 350 GDVVI-----PSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401 (403)
T ss_dssp TEECC-----CSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCC
T ss_pred CEECC-----CCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeC
Confidence 98764 22344455677899999999999999999999999999999998864
No 14
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=3.5e-33 Score=286.31 Aligned_cols=319 Identities=22% Similarity=0.320 Sum_probs=230.1
Q ss_pred cCCeeeeCCCc-eEEEcCCeEEEEEEEeccCCCeEEEEe-CCccCCC--CCeEEcccceEEEccCCCCC------CeEEE
Q psy15127 70 IKPFPISEPSD-ATVLSGSVVEFVCRVGGDPLPTILWRR-DDGKMPT--GRAKILDDRSLQIENVGPQD------EGLYI 139 (633)
Q Consensus 70 ~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~p~p~i~W~~-~~~~i~~--~~~~~~~~~~L~i~~v~~~d------~G~Y~ 139 (633)
.+|.|+..|.+ +.+.+|+.++|.|.+.|.|.|.|+|+| +|..+.. .......+++|.|.+++.+| +|.|+
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEE
Confidence 46888888876 557899999999999999999999999 7877754 23345567899999999987 99999
Q ss_pred EEEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCC---CCeEEEEECCEEeccC----CCeeE
Q psy15127 140 CDVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQP---EPTLHWKKNGQFIDLE----SSKSL 211 (633)
Q Consensus 140 C~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p---~~~i~W~~~~~~~~~~----~~~~~ 211 (633)
|.|.|..|.. +..+.|.|..+ |.+...+....+.+|+.+.|.|.+ .+.+ .+.+.|++++..+... .....
T Consensus 82 C~a~n~~g~~~s~~~~v~v~~~-p~~~~~~~~~~v~~G~~v~l~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~ 159 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVRAVVA-QYYEADVNKEHVIRGNSAVIKCLI-PSFVADFVEVVSWHTDEEENYFPGAEYDGKYL 159 (388)
T ss_dssp EEEEETTEEEECCCEEEEEECC-CCCCCBCCCEEEETTSCEEECCBC-CTTTTTTEEEEEEEETTCCEECSSSCBTTTEE
T ss_pred EEEEccCCeEEecceEEEEccc-cccccCccceeeecCCcEEEEEEC-cCCCCCCcceEEEEeCCCcccccccCCCCcEE
Confidence 9999998874 56778888777 777777778889999999999995 4443 3799999998776432 11222
Q ss_pred EeccceeeeEEE----e-eeEEEEeecCCCCCC-------cccc------------cccceeEEecCCceEEEEEEEeee
Q psy15127 212 DLSRRTLGWLRV----R-PLYWNVARPRANLNP-------RYIG------------RKMASLLIWNHPRVNRLSCFAEGS 267 (633)
Q Consensus 212 ~~~~~~~~~~~~----~-g~y~C~a~~~~~~~p-------~~~~------------~~~~~~~~~~~g~~~~l~C~~~g~ 267 (633)
......+.+..+ . |.|+|.+.+..+... .+.. ........+..|+.++|.|.+.|.
T Consensus 160 ~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~ 239 (388)
T 2v5m_A 160 VLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGF 239 (388)
T ss_dssp ECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEE
T ss_pred EccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCC
Confidence 223333333222 4 899999988653210 0100 001122346678999999999999
Q ss_pred cCCeeEEEECCEEEEec-cCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc---------
Q psy15127 268 PLPSVFWTQEGSQVLMF-PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV--------- 337 (633)
Q Consensus 268 p~~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~--------- 337 (633)
|.+.+.|++++..+... ......+.. ..++.|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+.
T Consensus 240 p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 318 (388)
T 2v5m_A 240 PAPSFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQT 318 (388)
T ss_dssp SCCEEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEE
T ss_pred CCCEEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEE
Confidence 99999999975322100 000112222 2456899999999999999999999999998888888875321
Q ss_pred ---------------CCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEe
Q psy15127 338 ---------------LPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSV 391 (633)
Q Consensus 338 ---------------~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 391 (633)
.|.|.+.|.............+.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 319 v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 319 VDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 123334443333322233345689999999999999999999999988888876
No 15
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-32 Score=283.11 Aligned_cols=320 Identities=26% Similarity=0.339 Sum_probs=238.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEec-cCCCeEEEEeCCccCC---CCCeEEcccceEEEccC-----CCCCCeEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGG-DPLPTILWRRDDGKMP---TGRAKILDDRSLQIENV-----GPQDEGLYI 139 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~-~p~p~i~W~~~~~~i~---~~~~~~~~~~~L~i~~v-----~~~d~G~Y~ 139 (633)
.....+..+|.++.+.+|+.++|.|.+.+ .|.+.++|+|+|..+. ..+.....++.|.|.++ +.+|+|.|+
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~ 98 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQ 98 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEE
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEE
Confidence 34567789999999999999999999976 5788999999999885 34566667788999888 677999999
Q ss_pred EEEEeCCce--EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCC--CeeEEecc
Q psy15127 140 CDVENLVGS--ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLES--SKSLDLSR 215 (633)
Q Consensus 140 C~~~n~~g~--~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~~~ 215 (633)
|.+.+..+. .+..+.|.|..+ +.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+.... ........
T Consensus 99 C~~~~~~~~~~~s~~~~l~v~~p-~~~~~~~~~~~~~~G~~v~l~C~-~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 176 (403)
T 3laf_A 99 CEASLGDSGSIISRTAKVMVAGP-LRFLSQTESITAFMGDTVLLKCE-VIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPS 176 (403)
T ss_dssp EEEECGGGCEEECCCEEEEECCC-CEECSCCCCEEEETTSCEEECCC-EECSSCCEEEEEESSSBCCCCTTCCSEEECTT
T ss_pred EEEEeCCCccEEEEEEEEEecCC-CccccCCCcEEEEcCCeEEEEEE-EcccCCCeEEEEECCEeccccCCceEEEEcCC
Confidence 999965433 355677777776 77777788889999999999999 5788999999999998775322 22222223
Q ss_pred ceeeeEEE----eeeEEEEeecCCCCCCc----ccc------------cccceeEEecCCceEEEEEEEeeecCCeeEEE
Q psy15127 216 RTLGWLRV----RPLYWNVARPRANLNPR----YIG------------RKMASLLIWNHPRVNRLSCFAEGSPLPSVFWT 275 (633)
Q Consensus 216 ~~~~~~~~----~g~y~C~a~~~~~~~p~----~~~------------~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 275 (633)
..+.+..+ .|.|+|.+.|..+.... +.. ........+..|+.++|.|.+.|.|.+.+.|+
T Consensus 177 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~ 256 (403)
T 3laf_A 177 GALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWL 256 (403)
T ss_dssp SCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEE
T ss_pred ceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEE
Confidence 33333322 48999999987653210 000 01122344668999999999999999999999
Q ss_pred ECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc------------------
Q psy15127 276 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV------------------ 337 (633)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------ 337 (633)
+++..+.. ...+.....++.|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+.
T Consensus 257 ~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l 332 (403)
T 3laf_A 257 RGEEVIQL----RSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEF 332 (403)
T ss_dssp ETTEECCC----SSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEE
T ss_pred ECCeeccC----CCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEE
Confidence 99987642 22344555677899999999999999999999999999888888875331
Q ss_pred ------CCCceEEeCCCccccC-C------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecC
Q psy15127 338 ------LPKGTFTLGQPNLATG-N------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPR 394 (633)
Q Consensus 338 ------~p~p~~~~~~~~~~~g-~------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~ 394 (633)
.|.|.+.|........ . ....+.|..+..+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 333 ~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 333 ECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp CCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred EEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 1223333332221110 0 1123578899999999999999999999999999998764
No 16
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=4.6e-33 Score=284.73 Aligned_cols=316 Identities=22% Similarity=0.311 Sum_probs=231.0
Q ss_pred CcCCeeeeCCCceEE---EcCCeEEEEEEEeccCCCeEEEEeCCccCCCC--CeEEcccceEEEccCCC-CCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATV---LSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG--RAKILDDRSLQIENVGP-QDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~---~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~--~~~~~~~~~L~i~~v~~-~d~G~Y~C~~ 142 (633)
..+|.|...|.+..+ .+|+.++|.|.+.|.|.+.++|+|+|..+... ......++.|.|.++.. +|+|.|+|.|
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 81 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVA 81 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEE
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEE
Confidence 357899999998877 78999999999999999999999999988642 33444577999999997 9999999999
Q ss_pred EeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCC--eeEEeccceee
Q psy15127 143 ENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS--KSLDLSRRTLG 219 (633)
Q Consensus 143 ~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~~~ 219 (633)
.|..|.. +..+.|.|...+......+....+.+|+.+.|.|.+..+.|.+.+.|++++..+..... .........+.
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~ 161 (382)
T 1cs6_A 82 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLY 161 (382)
T ss_dssp EETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEE
T ss_pred EcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEE
Confidence 9998874 44678888777333333456678999999999999667788899999999876532221 11111223333
Q ss_pred eEEE----eeeEEEEeecCCCCC-------C-ccc-------------ccccceeEEecCCceEEEEEEEeeecCCeeEE
Q psy15127 220 WLRV----RPLYWNVARPRANLN-------P-RYI-------------GRKMASLLIWNHPRVNRLSCFAEGSPLPSVFW 274 (633)
Q Consensus 220 ~~~~----~g~y~C~a~~~~~~~-------p-~~~-------------~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W 274 (633)
+..+ .|.|+|.+.+..+.. . .+. .........+..|+.+.|.|.+.|.|.+.+.|
T Consensus 162 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W 241 (382)
T 1cs6_A 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW 241 (382)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEE
T ss_pred EEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEE
Confidence 3222 489999998876310 0 000 00112245567899999999999999999999
Q ss_pred EECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc-----------------
Q psy15127 275 TQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV----------------- 337 (633)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~----------------- 337 (633)
++++..+.. ........|.|.++..+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 242 ~~~~~~~~~--------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~ 313 (382)
T 1cs6_A 242 RKLDGSQTS--------KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLR 313 (382)
T ss_dssp EECCSCCSC--------CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEE
T ss_pred EECCccccc--------EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEE
Confidence 998875421 0112456899999999999999999999999998888888875322
Q ss_pred -------CCCceEEeCCCccccCC------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEee
Q psy15127 338 -------LPKGTFTLGQPNLATGN------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVE 392 (633)
Q Consensus 338 -------~p~p~~~~~~~~~~~g~------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 392 (633)
.|.|.+.|......... ....+.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 314 l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 314 WSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 12333444322211110 01246888999999999999999999999999999885
No 17
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=303.58 Aligned_cols=435 Identities=17% Similarity=0.194 Sum_probs=221.6
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEE-EE--eCCccCCCCCeEEcc----cceEEEccCCCCCCeEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTIL-WR--RDDGKMPTGRAKILD----DRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~-W~--~~~~~i~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
.+|.|. .+.++.+.+|++++|.|.+.|.|.|.+. |+ ++|..+......... .+.|.|.++...|+|.|+|.|
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEE
Confidence 457776 6778999999999999999999999887 88 677766433222221 258999999999999999999
Q ss_pred EeCCce-EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCC--C-CCCCeEEEEECCEEeccCCCeeEEecccee
Q psy15127 143 ENLVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPK--G-QPEPTLHWKKNGQFIDLESSKSLDLSRRTL 218 (633)
Q Consensus 143 ~n~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~--~-~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 218 (633)
.|..|. .+..+.|.|..+ |.....|.... .....+.|.|.... + .+...+
T Consensus 243 ~n~~G~~~s~~~~l~V~~~-P~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i~~Y------------------------ 296 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEP-PVPIAPPQLAS-VGATYLWIQLNANSINGDGPIVAR------------------------ 296 (731)
T ss_dssp EETTEEEECCCEEEEEECC-CCBSSCCEEEE-ECSSCEEEECCCSSBSSCSCCCEE------------------------
T ss_pred ECCCCCcceeeEEEEEecC-CCCCCCcceec-cCCceEEEEeCCcccCCCCccEEE------------------------
Confidence 999998 777788999887 65444443332 23456666665211 1 010000
Q ss_pred eeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCc
Q psy15127 219 GWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG 298 (633)
Q Consensus 219 ~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 298 (633)
.+.|...+. ...........
T Consensus 297 ----------------------------------------------------~v~~~~~~~--------~~~~~~~~~~~ 316 (731)
T 2v5y_A 297 ----------------------------------------------------EVEYCTASG--------SWNDRQPVDST 316 (731)
T ss_dssp ----------------------------------------------------EEEEEESSS--------SCEEEEECCSS
T ss_pred ----------------------------------------------------EEEEEECCC--------CceEEeccCcc
Confidence 111211110 00011122345
Q ss_pred eEEEcCCCCCCCeEEEEEEE--eCCceeEEEEEEEEEecccCC--Cc-------------eEEeCCCcccc---------
Q psy15127 299 TLRIQGVQKEDAGFFVCSAL--SVAGSTTVRAFLQVREFCVLP--KG-------------TFTLGQPNLAT--------- 352 (633)
Q Consensus 299 ~l~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~l~v~~~~~~p--~p-------------~~~~~~~~~~~--------- 352 (633)
.+.|.++...+...|.|.|. |..|....+..+.+......| +| .+.|.+.....
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~ 396 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLT 396 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEE
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEE
Confidence 78999999888888999999 998876544333333222221 11 23344321100
Q ss_pred ------C---------------CCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCC
Q psy15127 353 ------G---------------NSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPG 411 (633)
Q Consensus 353 ------g---------------~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~ 411 (633)
+ .....+.+.+|.....|.|++.|.|..|... +..+.+...... |+
T Consensus 397 v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~------------P~ 463 (731)
T 2v5y_A 397 VHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDL------------PG 463 (731)
T ss_dssp EEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCC------------CC
T ss_pred EEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCC------------CC
Confidence 0 1123457889999999999999999999763 444555443322 33
Q ss_pred CCC--CcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCC-------eEEEEEeeeeceEEEecCCCCCeE
Q psy15127 412 PPA--APVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTG-------WVVAAHRITSTSITVSDLKPDTSY 482 (633)
Q Consensus 412 ~p~--~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~-------~~~~~~~~~~~~~~i~~L~p~~~Y 482 (633)
+|. .+... ...+++.|+|++|... ++.+.+|.|+|+..+.... ..........+.++|.+|.|++.|
T Consensus 464 ~p~~~~~~~~-~~~~si~l~W~~P~~~---~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 539 (731)
T 2v5y_A 464 AVPTESIQGS-TFEEKIFLQWREPTQT---YGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTY 539 (731)
T ss_dssp CCCTTTCEEE-EETTEEEEECCCCSCC---SSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEE
T ss_pred CCCcceEEee-ecCCeEEEEEcCCCCC---CCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEE
Confidence 343 33333 2478999999998743 5789999999998653221 222223345678999999999999
Q ss_pred EEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchh
Q psy15127 483 MFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEA 562 (633)
Q Consensus 483 ~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~ 562 (633)
.|+|+|.|..|.|+++.. .++|...+|..|+.... .....+.++|.|+|.+| ...+
T Consensus 540 ~~~V~A~n~~G~g~~s~~--~~~T~~~~P~~p~~~~~--------------~~~~~~~~si~l~W~pp--------~~~~ 595 (731)
T 2v5y_A 540 SFTIRASTAKGFGPPATN--QFTTKISAPSMPAYELE--------------TPLNQTDNTVTVMLKPA--------HSRG 595 (731)
T ss_dssp EEEEEEEETTEEEEEEEE--EEECCCCCCCC-------------------------------------------------
T ss_pred EEEEEEEeCCccCCCccc--EEEcCCCCCCCCCcccc--------------cccccCCceEEEEEeCC--------CCCC
Confidence 999999999999998842 47787777777664310 12346789999999965 5778
Q ss_pred hhhcceeEEEEEEcCCCcccce--e-------eeeeccce---------------------eEeecCCccceEEeecccc
Q psy15127 563 RARLGTKVVNLRELIPTASTAV--R-------ITWEKYNM---------------------ATVMNAATTTSYTVTHLRK 612 (633)
Q Consensus 563 ~~i~~y~~i~~~~~~~~~~~~~--~-------~~w~~~~~---------------------~~~~~~~~~~~~~i~~L~~ 612 (633)
|.|++| .|+|+.......... . ..|..... ..+........|.+.+|+|
T Consensus 596 g~I~~Y-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p 674 (731)
T 2v5y_A 596 APVSVY-QIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLP 674 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEE-EEEEEecCCCCCccccccccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCC
Confidence 999999 999987654321100 0 01111100 0000000112344556999
Q ss_pred ceeEEEEEeccccccccccCC
Q psy15127 613 FTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 613 ~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
++.|.|+|+|++.+|.|..++
T Consensus 675 ~~~Y~i~v~A~s~~g~~~~~~ 695 (731)
T 2v5y_A 675 YKSYRIYFQAASRANGETKID 695 (731)
T ss_dssp ---------------------
T ss_pred CCceEEEEEEEEecCCCcEee
Confidence 999999999999999998753
No 18
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=6.7e-33 Score=284.93 Aligned_cols=320 Identities=19% Similarity=0.240 Sum_probs=228.3
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEec-cCCCeEEEEeCCccCCCCC--e-EEcccceEEEccCCCCCCeEEEEEEE
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGG-DPLPTILWRRDDGKMPTGR--A-KILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~-~p~p~i~W~~~~~~i~~~~--~-~~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
+..+|.|...|.++.+.+|+.++|.|.+.+ .|.+.++|+|+|..+.... . ....+++|.|.+++.+|+|.|+|.|.
T Consensus 3 v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (395)
T 1bih_A 3 VDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAE 82 (395)
T ss_dssp --CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEE
T ss_pred cCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEE
Confidence 356899999999999999999999999998 8899999999999886542 2 23346789999999999999999999
Q ss_pred eCCceEE-EEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE---EeccC---CCeeEEeccc
Q psy15127 144 NLVGSIS-LRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ---FIDLE---SSKSLDLSRR 216 (633)
Q Consensus 144 n~~g~~s-~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~---~~~~~---~~~~~~~~~~ 216 (633)
|..|... ..+.|.|... +.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++. ..... ..........
T Consensus 83 n~~g~~~s~~~~l~v~~~-~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (395)
T 1bih_A 83 TPAGVASSRVISFRKTYL-IASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDG 161 (395)
T ss_dssp ETTEEEECCCEEEEEEEE-ECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTS
T ss_pred eCCCeEEeEEEEEEEEEe-ecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCC
Confidence 9888753 4466666654 2223344566778999999999966789999999999861 11111 1222223344
Q ss_pred eeeeEEEe----e---eEEEEeecCCCCCCccc--------------------ccccceeEEecCCceEEEEEEEeeecC
Q psy15127 217 TLGWLRVR----P---LYWNVARPRANLNPRYI--------------------GRKMASLLIWNHPRVNRLSCFAEGSPL 269 (633)
Q Consensus 217 ~~~~~~~~----g---~y~C~a~~~~~~~p~~~--------------------~~~~~~~~~~~~g~~~~l~C~~~g~p~ 269 (633)
.+.+..+. | .|+|.+.|..+...... .........+..|+.+.|.|.+.|.|.
T Consensus 162 ~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~ 241 (395)
T 1bih_A 162 NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPM 241 (395)
T ss_dssp CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSC
T ss_pred cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCC
Confidence 55555543 7 99999999876421110 000123356778999999999999999
Q ss_pred CeeEEEECCEEEEeccCCccceEEE---ccCceEEEcCCCCCCCeEEEEEEEeCCceeEE-EEEEEEEecccC-------
Q psy15127 270 PSVFWTQEGSQVLMFPGNAYGHLHV---TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV-RAFLQVREFCVL------- 338 (633)
Q Consensus 270 ~~v~W~~~g~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~~~------- 338 (633)
+.+.|+++|..+..... .++.. .....|.|.++..+|+|.|+|.|.|..|.... .+.|.|...|.+
T Consensus 242 ~~i~W~~~g~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~ 318 (395)
T 1bih_A 242 GYPNYFKNGKDVNGNPE---DRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318 (395)
T ss_dssp CCCEEEETTEECCCCTT---SSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSE
T ss_pred CeEEEEECCEEcCCCCc---eeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcc
Confidence 99999999987743221 22221 12237999999999999999999999998655 778887753221
Q ss_pred ------------------CCceEEeCCCccccCC-----CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEe
Q psy15127 339 ------------------PKGTFTLGQPNLATGN-----SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSV 391 (633)
Q Consensus 339 ------------------p~p~~~~~~~~~~~g~-----p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 391 (633)
|.|.+.|......... ....+.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 319 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 319 IVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 2222222221111100 0114578899999999999999999999988888876
No 19
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.9e-31 Score=288.76 Aligned_cols=340 Identities=16% Similarity=0.160 Sum_probs=237.2
Q ss_pred eEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCC
Q psy15127 49 VLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMP 113 (633)
Q Consensus 49 ~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~ 113 (633)
+|.|.+++. +|.|+|.|.+ +..+|.+...+....+.+|+.++|.|.+.+. +.+.+.|+|++....
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~ 155 (585)
T 2ocw_A 76 VVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP 155 (585)
T ss_pred EEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence 599999998 9999999987 5667888888888999999999999999864 456799999886431
Q ss_pred --------------CCCeEEcccc------eEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEE
Q psy15127 114 --------------TGRAKILDDR------SLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRV 173 (633)
Q Consensus 114 --------------~~~~~~~~~~------~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~ 173 (633)
.++..+..++ .|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++ |....+
T Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~------p~~~~~ 229 (585)
T 2ocw_A 156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE------PELVYE 229 (585)
T ss_pred eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC------CceeEE
Confidence 2333333322 79999999999999999999999988889999998763 344567
Q ss_pred ecCCcEEEEEeCCCCCCC-CeEEEE-ECCEE---eccC-------CCeeEEec----cc--eeeeEEE----eeeEEEEe
Q psy15127 174 ASGETALLECGPPKGQPE-PTLHWK-KNGQF---IDLE-------SSKSLDLS----RR--TLGWLRV----RPLYWNVA 231 (633)
Q Consensus 174 ~~g~~~~l~C~~~~~~p~-~~i~W~-~~~~~---~~~~-------~~~~~~~~----~~--~~~~~~~----~g~y~C~a 231 (633)
.+|+.+.|.|.+....|. +.+.|+ ++|.. +... ....+... .. .+.+..+ .|.|+|.|
T Consensus 230 ~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a 309 (585)
T 2ocw_A 230 DLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGA 309 (585)
T ss_pred cCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEE
Confidence 899999999995333333 689997 88731 1110 01111111 12 2333322 48999999
Q ss_pred ecCCCCC-----Ccc--c------ccccceeEEecCCceEEEEEEEeeecCCee----EEEE--CCE--EEEeccC----
Q psy15127 232 RPRANLN-----PRY--I------GRKMASLLIWNHPRVNRLSCFAEGSPLPSV----FWTQ--EGS--QVLMFPG---- 286 (633)
Q Consensus 232 ~~~~~~~-----p~~--~------~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v----~W~~--~g~--~~~~~~~---- 286 (633)
.|..... ... . .........+..|+.+.|.|.+.|.|.+.+ .|++ +|. .+.....
T Consensus 310 ~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~ 389 (585)
T 2ocw_A 310 HSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKA 389 (585)
T ss_pred EcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeec
Confidence 9864322 110 0 011123445668999999999999999977 7999 887 4432111
Q ss_pred CccceEEEc---cCce--EEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc-------------------------
Q psy15127 287 NAYGHLHVT---QEGT--LRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC------------------------- 336 (633)
Q Consensus 287 ~~~~~~~~~---~~~~--l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~------------------------- 336 (633)
....++.+. .++. |.|.++..+|+|.|+|.| |..|..+..+.|.|...+
T Consensus 390 ~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~ 468 (585)
T 2ocw_A 390 QYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPC 468 (585)
T ss_pred ccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecC
Confidence 112333333 2333 999999999999999999 888988888888886421
Q ss_pred ---cCCCceEEeCCCcccc------C-----------CCCCceEEecccccCCEEEEEEEEcCCcceeE-EEEEEeecCC
Q psy15127 337 ---VLPKGTFTLGQPNLAT------G-----------NSDLRRIACDLRETDSGLYTCTASSESGETSW-SASLSVEPRP 395 (633)
Q Consensus 337 ---~~p~p~~~~~~~~~~~------g-----------~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~-~~~l~v~~~p 395 (633)
..|.|.+.|....... + .....+.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|
T Consensus 469 ~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 469 KFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 2233344444332111 0 01135688999999999999999999997654 4899999876
No 20
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.7e-32 Score=282.71 Aligned_cols=321 Identities=23% Similarity=0.281 Sum_probs=233.2
Q ss_pred cCcCCeeee-CCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEE-cccceEEEc----cCCCCCCeEE
Q psy15127 68 ALIKPFPIS-EPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKI-LDDRSLQIE----NVGPQDEGLY 138 (633)
Q Consensus 68 v~~~p~~~~-~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~-~~~~~L~i~----~v~~~d~G~Y 138 (633)
+..+|.+.. .+....+.+|+.++|.|.+.|.|.+.++|+|+|..+.. .+... ..++.|.|. +++.+|+|.|
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y 92 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 92 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEE
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEE
Confidence 456788775 46778899999999999999999999999999987742 22222 235667665 8889999999
Q ss_pred EEEEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccce
Q psy15127 139 ICDVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRT 217 (633)
Q Consensus 139 ~C~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 217 (633)
+|.|.|..|.. +..+.|.|..++......+....+.+|+.+.|.|.+..+.|.+.+.|++++.................
T Consensus 93 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (404)
T 3p3y_A 93 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGD 172 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSC
T ss_pred EEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCc
Confidence 99999998885 57788999887333344455678999999999999658899999999998754433333332223333
Q ss_pred eeeEEE-----eeeEEEEeecCCCCC---------------------Ccccccc-cceeEEecCCceEEEEEEEeeecCC
Q psy15127 218 LGWLRV-----RPLYWNVARPRANLN---------------------PRYIGRK-MASLLIWNHPRVNRLSCFAEGSPLP 270 (633)
Q Consensus 218 ~~~~~~-----~g~y~C~a~~~~~~~---------------------p~~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~ 270 (633)
+.+..+ .|.|+|.+.|..+.. |.+.... ......+..|+.+.|.|.+.|.|.+
T Consensus 173 l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~ 252 (404)
T 3p3y_A 173 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP 252 (404)
T ss_dssp EEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC
T ss_pred EEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC
Confidence 333222 379999998865521 1111111 1234557789999999999999999
Q ss_pred eeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc-------------
Q psy15127 271 SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV------------- 337 (633)
Q Consensus 271 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------- 337 (633)
.+.|+++|..+.. ........++.|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+.
T Consensus 253 ~v~W~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g 327 (404)
T 3p3y_A 253 DIAWYKKGGDLPS-----DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPG 327 (404)
T ss_dssp EEEEEETTBCCCT-----TTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTT
T ss_pred cEEEEECCEECCC-----CcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecC
Confidence 9999999987631 1223344567899999999999999999999999998888888875331
Q ss_pred -----------CCCceEEeCCCcccc--CC-------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeec
Q psy15127 338 -----------LPKGTFTLGQPNLAT--GN-------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEP 393 (633)
Q Consensus 338 -----------~p~p~~~~~~~~~~~--g~-------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~ 393 (633)
.|.|.+.|....... +. ....+.|.++..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 328 ~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 328 EDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp CCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 233344443322111 00 012458899999999999999999999999999988763
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=6.9e-32 Score=288.05 Aligned_cols=412 Identities=15% Similarity=0.111 Sum_probs=262.5
Q ss_pred CCeEEEEEEe-cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCe
Q psy15127 58 DDQWKLIAKE-ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEG 136 (633)
Q Consensus 58 ~G~Y~C~a~~-v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G 136 (633)
.|.....+.- +..+|.|...+....+.+|+.++|.|.+.+ .++|+|++..+. .....+.|.|.+++.+|+|
T Consensus 22 ~g~~~~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~----~~~~~~~L~I~~~~~~D~G 93 (524)
T 2ec8_A 22 TGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET----NENKQNEWITEKAEATNTG 93 (524)
T ss_dssp -----------CCCCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC----EEECSSEEEESSCCSTTCE
T ss_pred cCCCCCeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc----ccCccceEEEcccchhhCE
Confidence 5655555543 788999988888899999999999999876 899999998772 3345678999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEE-CCEEeccCCCeeEEecc
Q psy15127 137 LYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKK-NGQFIDLESSKSLDLSR 215 (633)
Q Consensus 137 ~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~ 215 (633)
.|+|.+.| | .+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.+.+.+.|++ +|..+.... .......
T Consensus 94 ~Y~C~a~n--g-~~~~~~l~V~~p-~~~~~~~~~~~v~~G~~v~l~C~-~~~~~~~~v~W~~~~g~~l~~~~-~~~~~~~ 167 (524)
T 2ec8_A 94 KYTCTNKH--G-LSNSIYVFVRDP-AKLFLVDRSLYGKEDNDTLVRCP-LTDPEVTNYSLKGCQGKPLPKDL-RFIPDPK 167 (524)
T ss_dssp EEEEEETT--S-CEEEEEEECCCS-SCSBCCCCCCCEETTSCEEECCC-BSCCCCSCEEEECSSSCCCCSSC-EEEEETT
T ss_pred EEEEeecC--C-cceEEEEEECCC-CcccccccceEEEcCCeEEEECc-CCCCccceEEEEccCCcCcCCCC-ceeECCC
Confidence 99999998 4 377888888876 55557777788999999999999 4676678999988 776665332 2222233
Q ss_pred ceeeeEEE----ee-eEEEEeecCCCCCCc----ccc----------cccceeEEecCCceEEEEEEEeeecCCe-eEEE
Q psy15127 216 RTLGWLRV----RP-LYWNVARPRANLNPR----YIG----------RKMASLLIWNHPRVNRLSCFAEGSPLPS-VFWT 275 (633)
Q Consensus 216 ~~~~~~~~----~g-~y~C~a~~~~~~~p~----~~~----------~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~ 275 (633)
..+.+..+ .| .|+|.+.|..+.... +.. ........+..|+.+.|.|.+.|.|.+. +.|+
T Consensus 168 ~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~ 247 (524)
T 2ec8_A 168 AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWK 247 (524)
T ss_dssp TEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEE
T ss_pred ccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEE
Confidence 44444433 48 999999887543211 100 0111223577899999999999999886 9999
Q ss_pred ECCEEEEeccCCccceE----EEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEeccc--------------
Q psy15127 276 QEGSQVLMFPGNAYGHL----HVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCV-------------- 337 (633)
Q Consensus 276 ~~g~~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~-------------- 337 (633)
+++..+..... ....+ .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~ 326 (524)
T 2ec8_A 248 RENSQTKLQEK-YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVN 326 (524)
T ss_dssp ETTCSCCCCEE-EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEEC
T ss_pred eCCCCCccccc-cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEc
Confidence 99976310000 00001 122346899999999999999999999999998888888864221
Q ss_pred -------------CCCce-EEeCCCccccCCC---------------CCceEEecccccCCEEEEEEEEcCCcceeEEEE
Q psy15127 338 -------------LPKGT-FTLGQPNLATGNS---------------DLRRIACDLRETDSGLYTCTASSESGETSWSAS 388 (633)
Q Consensus 338 -------------~p~p~-~~~~~~~~~~g~p---------------~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~ 388 (633)
.|.|. +.|.......... ...+.|.++..+|+|.|+|.|.|..|..+.++.
T Consensus 327 ~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 327 DGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp TTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEE
Confidence 23444 6664443322111 124688899999999999999999999999999
Q ss_pred EEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeee
Q psy15127 389 LSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITS 468 (633)
Q Consensus 389 l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 468 (633)
|.|..+|....... ...+ .+.+.........+.|..... .+..+.-.....+....-. .....
T Consensus 407 l~V~~~P~i~~~~~-----~~~g---~l~C~~~g~P~p~i~W~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~ 469 (524)
T 2ec8_A 407 VYVNTKPEILTYDR-----LVNG---MLQCVAAGFPEPTIDWYFCPG------TEQRCSASVLPVDVQTLNS---SGPPF 469 (524)
T ss_dssp EEECEEEEEEEEEC-----CSSS---CEEEEEEEESCCEEECCCC----------------CCCCCCCCCCC----CCSS
T ss_pred EEEecCCeEeeccc-----CcCc---EEEEEEEeecCCEEEEEECCC------cccccccccCCCCceeeee---ccCCC
Confidence 99987665422211 1112 555665555666899987531 1110000000000000000 00011
Q ss_pred ceE----EEecCCCCCeEEEEEEEEeccccCCCCCCC
Q psy15127 469 TSI----TVSDLKPDTSYMFIVRAENSHGLGIPSPVS 501 (633)
Q Consensus 469 ~~~----~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 501 (633)
..+ .+......+.+.|+|.|.|..|....+...
T Consensus 470 g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 506 (524)
T 2ec8_A 470 GKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNF 506 (524)
T ss_dssp SCEEEEEEECCCSCCC-----CEEECSSCEEECCCCC
T ss_pred CcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEE
Confidence 112 233334578899999999999987655443
No 22
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.3e-30 Score=254.94 Aligned_cols=259 Identities=22% Similarity=0.304 Sum_probs=201.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe-EE---cccceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA-KI---LDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~-~~---~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.|...|.++.+.+|+.++|.|.+.+.|.+.++|+|++..+..+.. .. .....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 4689999999999999999999999999999999999999998865432 22 1246899999999999999999999
Q ss_pred CCceEEEEEEEEEEeeccccccCC-CceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc--ceeeeE
Q psy15127 145 LVGSISLRASLTVHLLRDDFRAEP-KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR--RTLGWL 221 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~~~~ 221 (633)
..|..+..+.|.|..+ |.+...+ ....+.+|+.+.|.|. ..+.|.+.+.|++++..+............ ..+.+.
T Consensus 83 ~~g~~~~~~~l~V~~~-p~~~~~~~~~~~v~~g~~~~l~C~-~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (284)
T 2rik_A 83 VAGKDSCSAQLGVQEP-PRFIKKLEPSRIVKQDEHTRYECK-IGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMY 160 (284)
T ss_dssp TTEEEEEEEEEEEECC-CEEEECCCSEEEEETTCCEEEEEE-EESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEEC
T ss_pred CCceEEEEEEEEccCC-CcccccCCCceEecCCceEEEEEE-EeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEC
Confidence 9999999999999988 6655443 4456889999999999 578899999999999988765543332222 122222
Q ss_pred E----EeeeEEEEeecCCCC-----------CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccC
Q psy15127 222 R----VRPLYWNVARPRANL-----------NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPG 286 (633)
Q Consensus 222 ~----~~g~y~C~a~~~~~~-----------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~ 286 (633)
. ..|.|+|.+.|..+. +|.+.. ......+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 161 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~--~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-- 236 (284)
T 2rik_A 161 NLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK--KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG-- 236 (284)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCS--CCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBT--
T ss_pred CCCcccCEEEEEEEEcCCCceeEEEEEEEecCCccee--CCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCC--
Confidence 2 248999999988662 222221 122345678999999999999999999999999987521
Q ss_pred CccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 287 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 287 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.............|.|.++..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 237 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 237 KKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 11111112222479999999999999999999999999999888875
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-32 Score=286.95 Aligned_cols=334 Identities=12% Similarity=0.100 Sum_probs=211.8
Q ss_pred ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEccc---ceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEE
Q psy15127 80 DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDD---RSLQIENVGPQDEGLYICDVENLVGSISLRASLT 156 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~ 156 (633)
.+.+.+|++++|.|.+.+.+...+.|++++..+.........+ .+|.|.+++.+|+|.|+|.|.|..+.....+.|.
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~ 136 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEE
Confidence 6889999999999999888888999999988654322111111 2599999999999999999999888776666666
Q ss_pred EEeeccccccCC-CceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCe---eEEeccceeeeEEEeeeEEEEee
Q psy15127 157 VHLLRDDFRAEP-KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK---SLDLSRRTLGWLRVRPLYWNVAR 232 (633)
Q Consensus 157 V~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~y~C~a~ 232 (633)
|. |.+...+ .......|+.+.|.|. +.|.|.|.|.|++++..+...... .+......+ .....|.|+|.|.
T Consensus 137 v~---~~~~~~~~~p~~~~~~~~~~L~C~-a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~G~Y~C~A~ 211 (527)
T 3qs9_E 137 IR---NTLLYTLRRPYFRKMENQDALVCI-SESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVL-HELFGTDIRCCAR 211 (527)
T ss_dssp EC--------CEEEEEEEECSSSSCEEEE-EEESSCCEEEEEEC-------------CEEECCSEE-CCCCSSCEEEEEE
T ss_pred EC---CceeeccCCCcEEecCCceEEEEE-EceecCCeEEEEECCCCCccccccCCcEEEEeeeec-cccCCEEEEEEEE
Confidence 65 2222222 2223456888899999 699999999999988765422111 111111111 1234689999999
Q ss_pred cCCCCCCcc--------cccccceeEEecCCceEEEEEEEe-eecCCeeEEEECCEEEEeccCCccceEE------EccC
Q psy15127 233 PRANLNPRY--------IGRKMASLLIWNHPRVNRLSCFAE-GSPLPSVFWTQEGSQVLMFPGNAYGHLH------VTQE 297 (633)
Q Consensus 233 ~~~~~~p~~--------~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~g~~~~~~~~~~~~~~~------~~~~ 297 (633)
|..+..... ..........+..|+.+.|.|.+. |.|.+.+.|+++|..+.... ...... ....
T Consensus 212 N~~G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~--~~~~~~~~~~~~~~~~ 289 (527)
T 3qs9_E 212 NELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGN--YFEMSTYSTNRTMIRI 289 (527)
T ss_dssp CSSCEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGG--EEEEEEEETTTEEEEE
T ss_pred eCCCcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCc--eeeeeeeccCcceeeE
Confidence 987743110 011123456778899999999996 89999999999998653110 000001 1123
Q ss_pred ceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc--------------------------cCCCceEEeCCCccc
Q psy15127 298 GTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC--------------------------VLPKGTFTLGQPNLA 351 (633)
Q Consensus 298 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--------------------------~~p~p~~~~~~~~~~ 351 (633)
+.|.|.++..+|+|.|+|.|.|. .+..+.|.|...+ ..|+|.+.|......
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~ 366 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKS 366 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEE
T ss_pred EEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEE
Confidence 46999999999999999999987 5666666665322 113344444333221
Q ss_pred cCC------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCe
Q psy15127 352 TGN------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGS 425 (633)
Q Consensus 352 ~g~------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~ 425 (633)
... ....+.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|..... .. -..+.+.......
T Consensus 367 l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~---~~-------~~~l~C~a~g~P~ 436 (527)
T 3qs9_E 367 FPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAE---AS-------ASQASCFSDGYPL 436 (527)
T ss_dssp EECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEEC---CC-------CE---EEEECSSC
T ss_pred CcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEe---CC-------CCEEEEEEEEEcC
Confidence 100 1234578999999999999999999999998999999877643111 10 1123444445555
Q ss_pred EEEEeCCC
Q psy15127 426 VTLGWGEP 433 (633)
Q Consensus 426 i~l~W~~~ 433 (633)
..+.|...
T Consensus 437 p~i~W~~~ 444 (527)
T 3qs9_E 437 PSWTWKKC 444 (527)
T ss_dssp CEEEEECC
T ss_pred CeEEEEEC
Confidence 68888744
No 24
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=1.6e-30 Score=257.03 Aligned_cols=282 Identities=29% Similarity=0.433 Sum_probs=207.1
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC--CeEEc--cc--ceEEEccCCCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG--RAKIL--DD--RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~--~~~~~--~~--~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.+|.|...|.++.+.+|+.++|.|.+.+.|.+.+.|+|++..+... +.... .+ ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5799999999999999999999999999999999999999988643 33222 22 389999999999999999999
Q ss_pred eCCceEEEEEEEEEEeeccccc-----cCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecccee
Q psy15127 144 NLVGSISLRASLTVHLLRDDFR-----AEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTL 218 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~~p~~~-----~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 218 (633)
|..|..+..+.|.|..+ |.+. ..+....+..|+.+.|.|. ..+.|.+.+.|++++..+.....
T Consensus 83 n~~g~~~~~~~l~V~~~-p~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~i~W~~~~~~~~~~~~---------- 150 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVP-AKIHLPKTLEGMGAVHALRGEVVSIKIP-FSGKPDPVITWQKGQDLIDNNGH---------- 150 (305)
T ss_dssp ETTEEEEEEEEEEECEE-EEECCCHHHHSSCCEEEETTCCEEEEEE-EEEESCCEEEEEESSSBCCSSSS----------
T ss_pred cCCCCccceEEEEEecC-CccCCCccccccccEEecCCCEEEEEEE-ECCCCCCEEEEEECCEECCCCCc----------
Confidence 99999889999999876 4432 2234556777877777777 45666666666666543321100
Q ss_pred eeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCc
Q psy15127 219 GWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG 298 (633)
Q Consensus 219 ~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 298 (633)
..........
T Consensus 151 ----------------------------------------------------------------------~~~~~~~~~~ 160 (305)
T 2nzi_A 151 ----------------------------------------------------------------------YQVIVTRSFT 160 (305)
T ss_dssp ----------------------------------------------------------------------CEEEECSSEE
T ss_pred ----------------------------------------------------------------------EEEEEcCCce
Confidence 0000001234
Q ss_pred eEEEcC-CCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEE
Q psy15127 299 TLRIQG-VQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTAS 377 (633)
Q Consensus 299 ~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~ 377 (633)
.|.|.+ +..+|.|.|+|.|.|..|..+..+.|.|..
T Consensus 161 ~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~------------------------------------------- 197 (305)
T 2nzi_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD------------------------------------------- 197 (305)
T ss_dssp EEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEB-------------------------------------------
T ss_pred EEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEec-------------------------------------------
Confidence 688888 888888888888888888776666555542
Q ss_pred cCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCC
Q psy15127 378 SESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQT 457 (633)
Q Consensus 378 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~ 457 (633)
. |.+|..+.+.......+.|+|.+|...+ +.++..|.++++... ..
T Consensus 198 ----------------~---------------P~~p~~~~~~~~~~~~v~l~w~~p~~~g--~~~i~~y~v~~~~~~-~~ 243 (305)
T 2nzi_A 198 ----------------V---------------PDPPRGVKVSDVSRDSVNLTWTEPASDG--GSKITNYIVEKCATT-AE 243 (305)
T ss_dssp ----------------C---------------CCCCEEEEEESCCSSCEEEEEECCSCCS--BSCEEEEEEEEEETT-SC
T ss_pred ----------------C---------------CCCCCCceeeeccCCEEEEEEcCCccCC--CCceeEEEEEEecCC-CC
Confidence 2 1234444555567789999999986653 568999999998764 35
Q ss_pred CeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCC
Q psy15127 458 GWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNS 511 (633)
Q Consensus 458 ~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p 511 (633)
.|...... ....++|.+|.+++.|.|+|.|.|..|.|.+|..+..+.+.+.+|
T Consensus 244 ~w~~~~~~-~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p 296 (305)
T 2nzi_A 244 RWLRVGQA-RETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKT 296 (305)
T ss_dssp CEEEEEEE-SSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC---
T ss_pred ccEECccc-cCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccc
Confidence 67755433 367899999999999999999999999999998876666655443
No 25
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.7e-31 Score=277.83 Aligned_cols=323 Identities=15% Similarity=0.127 Sum_probs=211.0
Q ss_pred ceEEEcCCCC-CCeEEEEEEe------------cCcCCeee-eCCCceEEEcCCeEEEEEEEeccCCC---eEEEEeCCc
Q psy15127 48 SVLGARGALS-DDQWKLIAKE------------ALIKPFPI-SEPSDATVLSGSVVEFVCRVGGDPLP---TILWRRDDG 110 (633)
Q Consensus 48 ~~L~i~~v~~-~G~Y~C~a~~------------v~~~p~~~-~~~~~~~~~~G~~~~L~C~~~~~p~p---~i~W~~~~~ 110 (633)
+.|.|.+++. +| |+|.|.+ +..+|.+. ..+....+.+|+.+.|.|.+.+.|.+ .|+|+|++.
T Consensus 50 ~~l~i~~v~~d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~ 128 (450)
T 1z7z_I 50 KVYELSNVQEDSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEK 128 (450)
T ss_dssp EEEEEEEECSCBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTE
T ss_pred eEEEEEecccCCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCE
Confidence 3699999988 88 9999977 44456554 66777889999999999999998887 899999998
Q ss_pred cCCCCCeE-EcccceEEEccCCCCCCeEEEEEEEeCCceE--------EEEEEEEEEeeccccccCCCc---eEEecCCc
Q psy15127 111 KMPTGRAK-ILDDRSLQIENVGPQDEGLYICDVENLVGSI--------SLRASLTVHLLRDDFRAEPKD---TRVASGET 178 (633)
Q Consensus 111 ~i~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~--------s~~~~l~V~~~~p~~~~~~~~---~~~~~g~~ 178 (633)
.+...... ...++.|.|.+++.+|+|.|+|.|.|..|.. +....|.|... | ...|.. ..+.+|+.
T Consensus 129 ~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~--~~~p~~~~~~~v~~G~~ 205 (450)
T 1z7z_I 129 ELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-P--ATPPQLVSPRVLEVDTQ 205 (450)
T ss_dssp EEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-C--SSCCEEECCSEEETTSE
T ss_pred EeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-C--CCCCEecCceeEEeCCc
Confidence 87532211 1123589999999999999999999986642 23344555433 1 112222 67889999
Q ss_pred EEEEEeCCCCC-C--CCeEEEEECCEEeccCCCeeEEeccceeee-------EEEee--eEEEEeecCCCCCCc---cc-
Q psy15127 179 ALLECGPPKGQ-P--EPTLHWKKNGQFIDLESSKSLDLSRRTLGW-------LRVRP--LYWNVARPRANLNPR---YI- 242 (633)
Q Consensus 179 ~~l~C~~~~~~-p--~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g--~y~C~a~~~~~~~p~---~~- 242 (633)
+.|.|.+ .|. | .+.+.|++++..+... .......+.. ....| .|+|.+.|..+.... +.
T Consensus 206 v~l~C~~-~g~~P~~~~~~~W~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V 280 (450)
T 1z7z_I 206 GTVVCSL-DGLFPVSEAQVHLALGDQRLNPT----VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTI 280 (450)
T ss_dssp EEEEEEE-ESCTTGGGCEEEEEETTEECCCE----EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEe-eCCCCCCceEEEEeCCCEeCCce----EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEE
Confidence 9999994 665 7 7899999999887651 1111111111 12247 999999998652200 00
Q ss_pred -----ccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEE
Q psy15127 243 -----GRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 317 (633)
Q Consensus 243 -----~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 317 (633)
.........+.+|+.++|.|.+. |.+.+.| +|..+.. ......|.|..+..+|+|.|+|.|
T Consensus 281 ~~~~~p~i~~~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~----------~~~~~~L~i~~~~~~d~G~Y~C~a 346 (450)
T 1z7z_I 281 YSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP----------LGPRAQLLLKATPEDNGRSFSCSA 346 (450)
T ss_dssp ECCCCCEEEESCSEEETTCEEEEEEEC------------------------------CCCCCEEEECCGGGTTCEEEEEE
T ss_pred ecCCCCeEecCCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC----------CCceEEEEEecCcccCCceEEEEE
Confidence 00001123567899999999997 8899999 7766521 112347999999999999999999
Q ss_pred EeCCc-e---eEEEEEEEEEecccCCCc----eEEe------CCCccccCCCCCceE-------------EecccccCCE
Q psy15127 318 LSVAG-S---TTVRAFLQVREFCVLPKG----TFTL------GQPNLATGNSDLRRI-------------ACDLRETDSG 370 (633)
Q Consensus 318 ~n~~g-~---~~~~~~l~v~~~~~~p~p----~~~~------~~~~~~~g~p~~~~~-------------i~~~~~~d~g 370 (633)
.|..+ . ....+.|.|...|.+... .+.. .....+.|+|.+.+. +..+..+|+|
T Consensus 347 ~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~~v~~~d~G 426 (450)
T 1z7z_I 347 TLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEG 426 (450)
T ss_dssp EEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGGGCE
T ss_pred EcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeEeEehhhCe
Confidence 97655 3 346677777765433221 1111 111123455544331 1257789999
Q ss_pred EEEEEEEcCCcceeEEEEEEeec
Q psy15127 371 LYTCTASSESGETSWSASLSVEP 393 (633)
Q Consensus 371 ~y~c~a~n~~g~~~~~~~l~v~~ 393 (633)
.|+|.|.|..|..+..+.|.|..
T Consensus 427 ~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 427 TYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCceeEEEEEEEEc
Confidence 99999999999999999999874
No 26
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.7e-31 Score=271.43 Aligned_cols=303 Identities=21% Similarity=0.257 Sum_probs=208.1
Q ss_pred CCCCccccccceeeEEEEecccCCC--CCceEEeeCceEEEcCC-CC--CCeEEEEEEec-------------CcCCee-
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFD--SRRSRSIFGSVLGARGA-LS--DDQWKLIAKEA-------------LIKPFP- 74 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~v-~~--~G~Y~C~a~~v-------------~~~p~~- 74 (633)
++|.+.|+| ..+|.+... ..++. ..++.|.|.++ +. +|.|+|.|.|. ...+.+
T Consensus 34 g~P~p~i~W-------~k~g~~l~~~~~~~~~-~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~ 105 (384)
T 3kld_A 34 GNPKPHIRW-------KLNGTDVDIGMDFRYS-VVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFK 105 (384)
T ss_dssp EESCCEEEE-------EETTEECCC----CEE-EETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCS
T ss_pred CCCCCEEEE-------EECCEECcCCCCccEE-EECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccc
Confidence 456667774 334544432 23443 34678888876 44 99999999991 111222
Q ss_pred eeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCC-CeEE-cccceEEEccCCCCCCeEEEEEEEeCCceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTG-RAKI-LDDRSLQIENVGPQDEGLYICDVENLVGSISL 151 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~-~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~ 151 (633)
...+..+.+.+|+.+.|.|.+. +.|.+.+.|++++.++... +... ..++.|.|.+++.+|+|.|+|.|.|..+....
T Consensus 106 ~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 185 (384)
T 3kld_A 106 TRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKV 185 (384)
T ss_dssp CCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEE
T ss_pred cCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEeccccccee
Confidence 2223457889999999999764 4567899999999877543 3332 34578999999999999999999998765321
Q ss_pred ---EEEEEEEe------ecccc-ccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECC-EEeccCCCeeEEeccceeee
Q psy15127 152 ---RASLTVHL------LRDDF-RAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNG-QFIDLESSKSLDLSRRTLGW 220 (633)
Q Consensus 152 ---~~~l~V~~------~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (633)
...+.+.. .+|.+ ...+....+.+|+.+.|.|. ..|.|.+.+.|++++ ..+... .........|.+
T Consensus 186 ~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~-~~g~P~p~i~W~k~~~~~~~~~--~~~~~~~~~L~I 262 (384)
T 3kld_A 186 LGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECF-ALGNPVPTILWRRADGKPIARK--ARRHKSNGILEI 262 (384)
T ss_dssp ECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEE-EEEESCCEEEEEETTCCCCCTT--CEECTTSCEEEE
T ss_pred eCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEE-EeecCCCcEEEEeCCCcccccc--ceecCCCcEEEE
Confidence 12222221 11222 23456677889999999999 689999999999954 343321 111112223333
Q ss_pred EEE----eeeEEEEeecCCCCCCc---cccc------ccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCC
Q psy15127 221 LRV----RPLYWNVARPRANLNPR---YIGR------KMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGN 287 (633)
Q Consensus 221 ~~~----~g~y~C~a~~~~~~~p~---~~~~------~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~ 287 (633)
..+ .|.|+|.|.|..+.... +... .......+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 263 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~---- 338 (384)
T 3kld_A 263 PNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLT---- 338 (384)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCC----
T ss_pred CCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCC----
Confidence 222 58999999998774211 0000 112234567889999999999999999999999988742
Q ss_pred ccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 288 AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 288 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
..++.. .+++|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 339 -~~~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 339 -RDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp -BTTEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -CccEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 233333 45699999999999999999999999999999999885
No 27
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.4e-29 Score=274.14 Aligned_cols=401 Identities=17% Similarity=0.218 Sum_probs=261.9
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccCCC---eEEEEeCCccCC---------------CCCeEEcc---c--ceEEEccCC
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDPLP---TILWRRDDGKMP---------------TGRAKILD---D--RSLQIENVG 131 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p~p---~i~W~~~~~~i~---------------~~~~~~~~---~--~~L~i~~v~ 131 (633)
+..|..+.+.+|+.++|.|.+.+.+.+ .+.|+|++..+. .++..+.. + ..|.|.+++
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 356778899999999999999887654 799999986431 12333322 1 369999999
Q ss_pred CCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEec----c--
Q psy15127 132 PQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFID----L-- 205 (633)
Q Consensus 132 ~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~----~-- 205 (633)
.+|+|.|+|.|.|..+..+..+.|.|..+ |.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++.... .
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~-p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVSQG-PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEecC-ccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCC
Confidence 99999999999998888888899999988 8888888888999999999999965556678999999875421 0
Q ss_pred -------CCCeeEEeccc-----eeeeEEE----eeeEEEEeecCCCCCCc---ccc-cccceeEEecCCceEEEEEEEe
Q psy15127 206 -------ESSKSLDLSRR-----TLGWLRV----RPLYWNVARPRANLNPR---YIG-RKMASLLIWNHPRVNRLSCFAE 265 (633)
Q Consensus 206 -------~~~~~~~~~~~-----~~~~~~~----~g~y~C~a~~~~~~~p~---~~~-~~~~~~~~~~~g~~~~l~C~~~ 265 (633)
..+..+..... .|.+..+ .|.|+|.+.|..+.... +.. ...+..+.+..|+.+.|.|.+
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~- 241 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCAL- 241 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEc-
Confidence 11111111111 3433333 48999999988764211 111 122344567789999999997
Q ss_pred eecC---CeeEEE-ECCEE---EEeccC----CccceEEEcc---Cc--eEEEcCCCCCCCeEEEEEEEeCCceeE----
Q psy15127 266 GSPL---PSVFWT-QEGSQ---VLMFPG----NAYGHLHVTQ---EG--TLRIQGVQKEDAGFFVCSALSVAGSTT---- 325 (633)
Q Consensus 266 g~p~---~~v~W~-~~g~~---~~~~~~----~~~~~~~~~~---~~--~l~i~~~~~~d~G~Y~C~a~n~~g~~~---- 325 (633)
+.+. +.+.|+ ++|.. +..... ....++.... ++ .|.|.++..+|+|.|+|.|.|. |...
T Consensus 242 ~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~ 320 (585)
T 2ocw_A 242 GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSP 320 (585)
T ss_pred CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCc
Confidence 5554 678887 88742 211110 0123333322 34 7999999999999999999995 4433
Q ss_pred -EEEEEEEEecccC------------------------CCceE----EeCC--Ccc----c----------cCC------
Q psy15127 326 -VRAFLQVREFCVL------------------------PKGTF----TLGQ--PNL----A----------TGN------ 354 (633)
Q Consensus 326 -~~~~l~v~~~~~~------------------------p~p~~----~~~~--~~~----~----------~g~------ 354 (633)
..+.|.|...+.+ |.|.+ .|.. ... . .+.
T Consensus 321 ~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~ 400 (585)
T 2ocw_A 321 IQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 400 (585)
T ss_pred eeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEecc
Confidence 6677777653322 23333 4443 111 0 000
Q ss_pred ---CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeC
Q psy15127 355 ---SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWG 431 (633)
Q Consensus 355 ---p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~ 431 (633)
....+.|.++..+|+|.|+|.| |..|..+..+.|.|...|.. ...|. .........+.|.|.
T Consensus 401 ~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~------------~~~~~--~~~v~~G~~v~L~C~ 465 (585)
T 2ocw_A 401 PGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPN------------LKVPG--NVTAVLGETLKVPCH 465 (585)
T ss_pred CCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccc------------cccCC--ceeEecCCcEEEEEE
Confidence 0112678899999999999999 99998888899999764322 01121 122334567788887
Q ss_pred CCCCCCCCCcceeEEEEEEEEecCCCC----------eEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCC
Q psy15127 432 EPEPRGGGVAPVIGYTVEYFSSDLQTG----------WVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIP 497 (633)
Q Consensus 432 ~~~~~~~~~~~i~~Y~v~~~~~~~~~~----------~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~ 497 (633)
..... .....+.+.|...+.... ............++|.++...+.+.|+|.|.|..|.+..
T Consensus 466 ~~~~~----~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 537 (585)
T 2ocw_A 466 FPCKF----SSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGET 537 (585)
T ss_pred ecCCC----CCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEE
Confidence 64311 111224455555432110 111000112357999999999999999999999997653
No 28
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.98 E-value=8.8e-31 Score=279.42 Aligned_cols=322 Identities=14% Similarity=0.117 Sum_probs=205.9
Q ss_pred ccCCCCCCCCCCccccccceee----EEEEecc---cCCCCCceEEee---CceEEEcCCCC--CCeEEEEEEe------
Q psy15127 6 DTNHAHPMSSPRAEIEPATRTN----RVSISGD---PGFDSRRSRSIF---GSVLGARGALS--DDQWKLIAKE------ 67 (633)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~---~~~~~~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~------ 67 (633)
.+.|.. .+.|.+.|.|+.... ...+... ......|+.... .++|.|.+++. +|.|+|.|.|
T Consensus 19 ~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~ 97 (523)
T 2rcj_C 19 TISCTG-TSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSY 97 (523)
T ss_pred EEEEEE-eccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccc
Confidence 334444 344677888766431 1111110 011124555432 24799999998 9999999987
Q ss_pred ---------c----CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCC--eEEEEeCCccCCCCCeEE----ccc------
Q psy15127 68 ---------A----LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLP--TILWRRDDGKMPTGRAKI----LDD------ 122 (633)
Q Consensus 68 ---------v----~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p--~i~W~~~~~~i~~~~~~~----~~~------ 122 (633)
| ..+|.+...+....+.+|+.++|.|.+.+.|++ .|+|+|+|..+..+.... ..+
T Consensus 98 ~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 177 (523)
T 2rcj_C 98 VFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAAS 177 (523)
T ss_pred cccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEE
Confidence 2 245666666666677889999999999987654 899999999886543221 111
Q ss_pred ceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE---eeccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEE
Q psy15127 123 RSLQIENVGPQDEGLYICDVENLVGSISLRASLTVH---LLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKK 198 (633)
Q Consensus 123 ~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~ 198 (633)
..|.|.+++.+|+|.|+|.|.|..+.....+.+.+. ..+|.+...+....+.+|+.+.|.|.+....|.+ .|.|++
T Consensus 178 s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k 257 (523)
T 2rcj_C 178 SYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNS 257 (523)
T ss_pred EEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEec
Confidence 369999999999999999999998876555554322 1124443333334567999999999954444877 999999
Q ss_pred CCEEeccCCCeeEEecc------ceeeeE----EEeeeEEEEeecCCCCCC-----------cccccccceeEEecCCce
Q psy15127 199 NGQFIDLESSKSLDLSR------RTLGWL----RVRPLYWNVARPRANLNP-----------RYIGRKMASLLIWNHPRV 257 (633)
Q Consensus 199 ~~~~~~~~~~~~~~~~~------~~~~~~----~~~g~y~C~a~~~~~~~p-----------~~~~~~~~~~~~~~~g~~ 257 (633)
+|..+............ ..+.+. .. |.|+|.|.|..+... .+..........+..|+.
T Consensus 258 ~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~ 336 (523)
T 2rcj_C 258 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRT 336 (523)
T ss_pred CCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCc
Confidence 99875432111111111 122222 23 999999999887531 111111111112567899
Q ss_pred EEEEEEEeeecC----CeeEEEECCEEEEeccCCccceEE-----EccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEE
Q psy15127 258 NRLSCFAEGSPL----PSVFWTQEGSQVLMFPGNAYGHLH-----VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA 328 (633)
Q Consensus 258 ~~l~C~~~g~p~----~~v~W~~~g~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 328 (633)
+.|.|.+.|.|+ +.|.|+|+|..+..... ..... ....+.|.|..+..+|+|.|+|.|.|..+......
T Consensus 337 ~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~--~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 414 (523)
T 2rcj_C 337 PEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKT--KPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEK 414 (523)
T ss_pred eEEEEEEecccCCCCceEEEEEECCeEccCCcc--CCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeE
Confidence 999999999764 49999999998752211 11110 11123588999999999999999999877664443
Q ss_pred EEE
Q psy15127 329 FLQ 331 (633)
Q Consensus 329 ~l~ 331 (633)
.+.
T Consensus 415 ~~~ 417 (523)
T 2rcj_C 415 TIS 417 (523)
T ss_pred EEE
Confidence 343
No 29
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.98 E-value=4e-31 Score=270.98 Aligned_cols=300 Identities=19% Similarity=0.259 Sum_probs=212.2
Q ss_pred CCCCccccccceeeEEEEecccCCCCC-ceEEeeCceEEEcCCCC--------CCeEEEEEEe-------------cCcC
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSR-RSRSIFGSVLGARGALS--------DDQWKLIAKE-------------ALIK 71 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~--------~G~Y~C~a~~-------------v~~~ 71 (633)
+.|.+.|+|+.. +|.+..... ...+..+++|.|.+++. +|.|+|.|.| +..+
T Consensus 30 g~p~p~v~W~k~------~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~ 103 (388)
T 2v5m_A 30 GNPMPEIIWIRS------DGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVA 103 (388)
T ss_dssp EESCCEEEEEET------TSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred CCCCCEEEEEcC------CCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccc
Confidence 345566663321 344443322 22345678999999885 6999999998 3345
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCC---CeEEEEeCCccCC------CCCeEEcccceEEEccCCCCCC-eEEEEE
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPL---PTILWRRDDGKMP------TGRAKILDDRSLQIENVGPQDE-GLYICD 141 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~---p~i~W~~~~~~i~------~~~~~~~~~~~L~i~~v~~~d~-G~Y~C~ 141 (633)
|.+...+....+.+|+.++|.|.+.+.+. +.+.|++++..+. .++.....++.|.|.+++.+|+ |.|+|.
T Consensus 104 p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~ 183 (388)
T 2v5m_A 104 QYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCR 183 (388)
T ss_dssp CCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEE
T ss_pred cccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEE
Confidence 66666677788999999999999987643 6899999987652 3455666678999999999999 999999
Q ss_pred EEeCCceE-EEE---EEEEEEeec----cc-cccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEec----cCCC
Q psy15127 142 VENLVGSI-SLR---ASLTVHLLR----DD-FRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFID----LESS 208 (633)
Q Consensus 142 ~~n~~g~~-s~~---~~l~V~~~~----p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~----~~~~ 208 (633)
+.|..+.. ... ..|.|..+. |. .........+.+|+.+.|.|. ..|.|.+.+.|++++..+. ....
T Consensus 184 ~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~-~~g~p~p~v~W~~~~~~~~~~~~~~~~ 262 (388)
T 2v5m_A 184 TKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCP-AQGFPAPSFRWYKFIEGTTRKQAVVLN 262 (388)
T ss_dssp EEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCC-CEEESCCEEEEEEECTTSSCEEECCCS
T ss_pred eccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEE-CCCCCCCEEEEEecCCCCccccccccc
Confidence 99976442 221 356665431 21 122234457889999999999 6788999999999753221 1111
Q ss_pred eeEEeccceeeeEEE----eeeEEEEeecCCCCCCcc---c------ccccceeEEecCCceEEEEEEEeeecCCeeEEE
Q psy15127 209 KSLDLSRRTLGWLRV----RPLYWNVARPRANLNPRY---I------GRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWT 275 (633)
Q Consensus 209 ~~~~~~~~~~~~~~~----~g~y~C~a~~~~~~~p~~---~------~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 275 (633)
.........+.+..+ .|.|+|.|.|..+..... . .........+..|+.+.|.|.+.|.|.+.+.|+
T Consensus 263 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~ 342 (388)
T 2v5m_A 263 DRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWM 342 (388)
T ss_dssp SSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEE
T ss_pred CceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEE
Confidence 111222233333222 489999999987742110 0 011122345678999999999999999999999
Q ss_pred ECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 276 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
++|..+.. .++.|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 343 ~~g~~i~~------------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 343 KDGKAIGH------------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ETTEECSC------------CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ECCEECcc------------CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 99987631 2468999999999999999999999999999988876
No 30
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.98 E-value=6.7e-31 Score=269.99 Aligned_cols=308 Identities=17% Similarity=0.236 Sum_probs=216.2
Q ss_pred ccCCCCCCCCCCccccccceeeEEEEecccCCCCC-ceE-EeeCceEEEcCCCC--CCeEEEEEEec-------------
Q psy15127 6 DTNHAHPMSSPRAEIEPATRTNRVSISGDPGFDSR-RSR-SIFGSVLGARGALS--DDQWKLIAKEA------------- 68 (633)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~L~i~~v~~--~G~Y~C~a~~v------------- 68 (633)
.+.|..-...|.+.|+| ..+|.+...+. ++. ...+++|.|.+++. +|.|+|.|.|.
T Consensus 25 ~l~C~~~~~~p~~~v~W-------~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v 97 (395)
T 1bih_A 25 VLECIIEGNDQGVKYSW-------KKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRK 97 (395)
T ss_dssp EECCCEESCCSSCEEEE-------EESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEecCCCCceEEE-------EECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEE
Confidence 34444444456677774 44565554443 222 23467899999998 99999999981
Q ss_pred --CcCCeeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeCCc---cCC-----CCCeEEcccceEEEccCCCCCCe-
Q psy15127 69 --LIKPFPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRDDG---KMP-----TGRAKILDDRSLQIENVGPQDEG- 136 (633)
Q Consensus 69 --~~~p~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~---~i~-----~~~~~~~~~~~L~i~~v~~~d~G- 136 (633)
...|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++. +.. ..+.....++.|.|.+++.+|+|
T Consensus 98 ~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 175 (395)
T 1bih_A 98 TYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSD 175 (395)
T ss_dssp EEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCS
T ss_pred EEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCC
Confidence 011222 2335567799999999996 788999999999862 221 34555566789999999999999
Q ss_pred --EEEEEEEeCCceEEEEEEEEEE---ee---------ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEE
Q psy15127 137 --LYICDVENLVGSISLRASLTVH---LL---------RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQF 202 (633)
Q Consensus 137 --~Y~C~~~n~~g~~s~~~~l~V~---~~---------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~ 202 (633)
.|+|.|.|..+........... .. .|.+ .+....+.+|+.+.|.|. ..|.|.+.+.|+++|..
T Consensus 176 ~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~-~~g~p~~~i~W~~~g~~ 252 (395)
T 1bih_A 176 IYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCM-YGSNPMGYPNYFKNGKD 252 (395)
T ss_dssp SEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEE-EECSSCCCCEEEETTEE
T ss_pred ceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEE-eccCCCCeEEEEECCEE
Confidence 9999999988874333222111 11 1222 345678899999999999 58899999999999998
Q ss_pred eccCCCeeEEeccc----eeeeEE----EeeeEEEEeecCCCCCCc----ccc-------cccceeEEecCCceEEEEEE
Q psy15127 203 IDLESSKSLDLSRR----TLGWLR----VRPLYWNVARPRANLNPR----YIG-------RKMASLLIWNHPRVNRLSCF 263 (633)
Q Consensus 203 ~~~~~~~~~~~~~~----~~~~~~----~~g~y~C~a~~~~~~~p~----~~~-------~~~~~~~~~~~g~~~~l~C~ 263 (633)
+.......+..... .+.+.. ..|.|+|.|.|..+.... +.. ........+..|+.++|.|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~ 332 (395)
T 1bih_A 253 VNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCK 332 (395)
T ss_dssp CCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECE
T ss_pred cCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEE
Confidence 86543332221111 222222 248999999998775321 100 01111255678999999999
Q ss_pred EeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 264 AEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 264 ~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
+.|.|.+.+.|+++|..+.. .++... ++.|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 333 ~~g~p~p~v~W~~~g~~~~~------~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 333 VTGLPAPNVVWSHNAKPLSG------GRATVT-DSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEESCCCCEEEETTEECCS------SSEEEE-TTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECcccCCeeEEEECCEECCC------CceEEE-CCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 99999999999999988631 244443 459999999999999999999999999999888876
No 31
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=5.2e-32 Score=303.38 Aligned_cols=458 Identities=15% Similarity=0.140 Sum_probs=102.0
Q ss_pred cccCCCCCCCCCCccccccce--eeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe-------------
Q psy15127 5 LDTNHAHPMSSPRAEIEPATR--TNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE------------- 67 (633)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~------------- 67 (633)
+.+.|... .|.+.|+|+.. .... ..++..+.......|.|.+++. +|.|+|.+.+
T Consensus 146 v~L~C~~~--~p~~~v~w~~~~~~~~~------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~ 217 (772)
T 3v2a_R 146 VVIPCLGS--ISNLNVSLCARYPEKRF------VPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVV 217 (772)
T ss_dssp EEECCCCS--CSSCCEEEEEETTTEEE------CCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEE
T ss_pred EEEEccCC--CCCcEEEEEecCCCccc------cCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEE
Confidence 33444443 36677775543 2222 2233444455567899999998 9999999987
Q ss_pred c--CcCCeeeeCC-CceEEEcCCeEEEEEEEec--cCCCeEEEEeCCccCCCCCeE------------EcccceEEEccC
Q psy15127 68 A--LIKPFPISEP-SDATVLSGSVVEFVCRVGG--DPLPTILWRRDDGKMPTGRAK------------ILDDRSLQIENV 130 (633)
Q Consensus 68 v--~~~p~~~~~~-~~~~~~~G~~~~L~C~~~~--~p~p~i~W~~~~~~i~~~~~~------------~~~~~~L~i~~v 130 (633)
+ ..+|.+...+ ....+.+|+.++|.|.+.+ .+.+.+.|++++..+...... ......|.|.++
T Consensus 218 v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 297 (772)
T 3v2a_R 218 VVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGV 297 (772)
T ss_dssp EECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSC
T ss_pred EecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcC
Confidence 1 1123333444 4478999999999999987 455689999999876442211 112357999999
Q ss_pred CCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCC---CceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCC
Q psy15127 131 GPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEP---KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLES 207 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 207 (633)
+.+|+|.|+|.+.|..+..+..+.|.|..+ |.+...+ ....+.+|+.+.|.|. ..+.|.+.+.|+++|..+....
T Consensus 298 ~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~v~~G~~v~l~C~-~~~~p~~~v~W~~~g~~l~~~~ 375 (772)
T 3v2a_R 298 TRSDQGLYTCAASSGLMTKKNSTFVRVHEK-PFVAFGSGMESLVEATVGERVRIPAK-YLGYPPPEIKWYKNGIPLESNH 375 (772)
T ss_dssp CSTTCSEEEEEEECSSCEEEEEEEEEEECC-CC-----------------------------------------------
T ss_pred CcCCCeEEEEEEEcCCcceeEEEEEEEeCC-CeeEeccCCCCcEEEcCCCcEEEEEE-EeeeCCCeEEEEECCEeCCCCc
Confidence 999999999999999988888999999887 6544333 3457889999999999 5788999999999998876532
Q ss_pred CeeEEeccceeeeE----EEeeeEEEEeecCCCCC-------------Ccccccccc-eeEEecCCceEEEEEEEeeecC
Q psy15127 208 SKSLDLSRRTLGWL----RVRPLYWNVARPRANLN-------------PRYIGRKMA-SLLIWNHPRVNRLSCFAEGSPL 269 (633)
Q Consensus 208 ~~~~~~~~~~~~~~----~~~g~y~C~a~~~~~~~-------------p~~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~ 269 (633)
... ....+.+. ...|.|+|.|.|..+.. |.+...... ....+..|+.++|.|.+.|.|.
T Consensus 376 ~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 452 (772)
T 3v2a_R 376 TIK---AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPP 452 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEc---cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCC
Confidence 211 11222222 23589999999876532 111110000 1112567899999999999999
Q ss_pred Ce-eEEEECCEEEEec-c-----------------------CC----ccceEEEc-----cCceEEEcCCCCCCCeEEEE
Q psy15127 270 PS-VFWTQEGSQVLMF-P-----------------------GN----AYGHLHVT-----QEGTLRIQGVQKEDAGFFVC 315 (633)
Q Consensus 270 ~~-v~W~~~g~~~~~~-~-----------------------~~----~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C 315 (633)
|. +.|++++...... . +. ...+.... ....|.|.++ +|+|.|+|
T Consensus 453 p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C 530 (772)
T 3v2a_R 453 PHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKC 530 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEE
Confidence 96 9999974321000 0 00 00000110 1136777776 68999999
Q ss_pred EEEeCCceeEEEEEEEEEecccC-----------------------CCceEEeCCCcccc-----CC-------------
Q psy15127 316 SALSVAGSTTVRAFLQVREFCVL-----------------------PKGTFTLGQPNLAT-----GN------------- 354 (633)
Q Consensus 316 ~a~n~~g~~~~~~~l~v~~~~~~-----------------------p~p~~~~~~~~~~~-----g~------------- 354 (633)
.|.|..|..+..+.|.|...+.+ |.+.+.|....... +.
T Consensus 531 ~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (772)
T 3v2a_R 531 EAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLW 610 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCccccccccccccee
Confidence 99999998888887777643221 22333443222100 00
Q ss_pred ------------CCCceEEecccccCCEEEEEEEEcCCccee--EEEEEEee--cCCCCCceecCCCCCCCCCCCCCcEE
Q psy15127 355 ------------SDLRRIACDLRETDSGLYTCTASSESGETS--WSASLSVE--PRPGPHAVHRMPDSGLFPGPPAAPVI 418 (633)
Q Consensus 355 ------------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~--~~~~l~v~--~~p~~~~~~~~~~~~~~p~~p~~~~~ 418 (633)
....+.|.++..+|+|.|+|.|.|..|... ....|.|. .+|.. . ..+.. .
T Consensus 611 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~--~----------~~~~~--~ 676 (772)
T 3v2a_R 611 KLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTI--T----------GNLEN--Q 676 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEe--e----------cCCCc--e
Confidence 011267889999999999999999765443 33445553 22221 0 00111 0
Q ss_pred EEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeE-EEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCC
Q psy15127 419 LNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWV-VAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIP 497 (633)
Q Consensus 419 ~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~ 497 (633)
.......+.|.+.... .+.. .+.|...+..-.-. ..........+.|.++...+.+.|+|.|.|..|....
T Consensus 677 ~v~~g~~~~l~C~~~g------~P~p--~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 748 (772)
T 3v2a_R 677 TTSIGESIEVSCTASG------NPPP--QIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKV 748 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeCCCCEEEEEEeCc------cCCC--eEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeE
Confidence 1111233444443221 0110 12222222100000 0001112467899999999999999999999998765
Q ss_pred CC
Q psy15127 498 SP 499 (633)
Q Consensus 498 s~ 499 (633)
+.
T Consensus 749 ~~ 750 (772)
T 3v2a_R 749 EA 750 (772)
T ss_dssp --
T ss_pred EE
Confidence 43
No 32
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=5.9e-30 Score=267.67 Aligned_cols=375 Identities=14% Similarity=0.164 Sum_probs=244.8
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeE-----EEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTI-----LWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i-----~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
+...|.+..+.+|+.++|.|.+.+ |.|.+ .|+|++..+...+. ..|.|.+++. |+| |+|.|.+..+.
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~-----~~l~i~~v~~-d~g-Y~C~a~~~~~~ 73 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNR-----KVYELSNVQE-DSQ-PMCYSNCPDGQ 73 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTE-----EEEEEEEECS-CBC-CEEEEEETTEE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCCCc-----eEEEEEeccc-CCe-eEEEEeCCCCc
Confidence 456788899999999999999998 88888 99998876644332 3799999987 999 99999877777
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC---eEEEEECCEEeccCCCeeEEeccceeeeEE---
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP---TLHWKKNGQFIDLESSKSLDLSRRTLGWLR--- 222 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~---~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~--- 222 (633)
.+..+.|.|..++..+...+....+.+|+.+.|.|. ..+.|++ .|.|+|+|..+....... ......+.+..
T Consensus 74 ~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~-~~g~~~~~~~~v~W~k~g~~l~~~~~~~-~~~~~~L~i~~~~~ 151 (450)
T 1z7z_I 74 STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQ-VEGGAPRANLTVVLLRGEKELKREPAVG-EPAEVTTTVLVRRD 151 (450)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEE-EECCBCGGGEEEEEEETTEEEEEEECCT-TTEEEEEEEECCSS
T ss_pred ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEE-ecCCCCCcCcEEEEeeCCEEeecccccc-cccceEEEEEeecc
Confidence 888899999987344446777788999999999999 5676666 999999999886432110 00111233222
Q ss_pred -EeeeEEEEeecCCCCC----------C-cccc----ccccee---EEecCCceEEEEEEEeee-c--CCeeEEEECCEE
Q psy15127 223 -VRPLYWNVARPRANLN----------P-RYIG----RKMASL---LIWNHPRVNRLSCFAEGS-P--LPSVFWTQEGSQ 280 (633)
Q Consensus 223 -~~g~y~C~a~~~~~~~----------p-~~~~----~~~~~~---~~~~~g~~~~l~C~~~g~-p--~~~v~W~~~g~~ 280 (633)
..|.|+|.|.|..+.. + .+.. ...+.. ..+..|+.+.|.|.+.|. | .+.+.|+++|..
T Consensus 152 ~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~ 231 (450)
T 1z7z_I 152 HHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQR 231 (450)
T ss_dssp CSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEE
T ss_pred ccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEe
Confidence 2489999999885521 1 1100 011222 567789999999999999 6 689999999987
Q ss_pred EEeccCCccceEEEccCceEEEc---CCCCCCCe--EEEEEEEeCCceeEEEEEEEEEeccc------------------
Q psy15127 281 VLMFPGNAYGHLHVTQEGTLRIQ---GVQKEDAG--FFVCSALSVAGSTTVRAFLQVREFCV------------------ 337 (633)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------ 337 (633)
+.. ++....+. +.+. ++..+|.| .|+|.|.|..|..+..+.|.|...+.
T Consensus 232 ~~~-------~~~~~~~~-~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l 303 (450)
T 1z7z_I 232 LNP-------TVTYGNDS-FSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTV 303 (450)
T ss_dssp CCC-------EEEEETTE-EEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEE
T ss_pred CCc-------eEEecCCc-eeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcEEE
Confidence 641 22222222 2222 67899999 99999999999998888888875211
Q ss_pred ----CCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCc----ceeEEEEEEeecCCCCCceecCCCCCCC
Q psy15127 338 ----LPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESG----ETSWSASLSVEPRPGPHAVHRMPDSGLF 409 (633)
Q Consensus 338 ----~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g----~~~~~~~l~v~~~p~~~~~~~~~~~~~~ 409 (633)
.|.|.+.|.............+.|..+..+|.|.|+|.|.|..| ..+.++.|.|..+|...
T Consensus 304 ~C~~~p~p~i~W~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~----------- 372 (450)
T 1z7z_I 304 KCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLD----------- 372 (450)
T ss_dssp EEEC----------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECC-----------
T ss_pred EEecCCCCEeEECCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCcee-----------
Confidence 02233334000000111223578999999999999999997665 33466788887765441
Q ss_pred CCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEE
Q psy15127 410 PGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAE 489 (633)
Q Consensus 410 p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~ 489 (633)
..+............+.|.+.... .+.. .+.|...+. . .......+ .+...+.+.|+|.|.
T Consensus 373 -~~~~p~~~~~~~g~~~~l~C~~~g------~P~p--~i~W~~~g~----~---~~~~g~~~---~v~~~d~G~Y~C~a~ 433 (450)
T 1z7z_I 373 -ERDCPGNWTWPENSQQTPMCQAWG------NPLP--ELKCLKDGT----F---PLPIGESV---TVTRDLEGTYLCRAR 433 (450)
T ss_dssp -STTSCSEEEEETTCEECCCCCCEE------ESCC--EEEEEETTT----E---ECCTTSCE---ECCGGGCEEEEEEEE
T ss_pred -eccCCCceeEcCCCeEEEEEeccc------CCCC--cEEEEECCc----c---cCCCCCeE---eEehhhCeEEEEEEE
Confidence 011001122334556666665422 1111 234444432 0 00111222 567788899999999
Q ss_pred eccccCC
Q psy15127 490 NSHGLGI 496 (633)
Q Consensus 490 n~~G~g~ 496 (633)
|..|...
T Consensus 434 N~~G~~~ 440 (450)
T 1z7z_I 434 STQGEVT 440 (450)
T ss_dssp ETTEEEE
T ss_pred eCCCcee
Confidence 9999764
No 33
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=270.80 Aligned_cols=278 Identities=10% Similarity=-0.002 Sum_probs=176.0
Q ss_pred eEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC
Q psy15127 49 VLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT 114 (633)
Q Consensus 49 ~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~ 114 (633)
+|.|.+++. +|.|+|.|.| |..+|.+... ....+..|+.+.|.|.+.|.|.|.|+|+|++..+..
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~-~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~ 182 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLR-RPYFRKMENQDALVCISESVPEPIVEWVLCDSQGES 182 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEE-EEEEEECSSSSCEEEEEEESSCCEEEEEEC------
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcccccc-CCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcc
Confidence 599999998 9999999999 3333433211 122356688899999999999999999999876532
Q ss_pred CCeEEcccceEEEcc-CCCCCCeEEEEEEEeCCceEEE-EEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCC-CCC
Q psy15127 115 GRAKILDDRSLQIEN-VGPQDEGLYICDVENLVGSISL-RASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKG-QPE 191 (633)
Q Consensus 115 ~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~n~~g~~s~-~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~ 191 (633)
..... ....+.... ++..|+|.|+|.|.|..|.... .+.|.|... |.+ .+....+.+|+.+.|.|.+ .| .|.
T Consensus 183 ~~~~~-~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~-p~~--~~~~~~v~~G~~v~L~C~~-~g~~p~ 257 (423)
T 3qs7_E 183 CKEES-PAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQT-PQT--TLPQLFLKVGEPLWIRCKA-VHVNHG 257 (423)
T ss_dssp --------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSC-CCS--STTEEEEETTSCEEEEEEE-EESSSC
T ss_pred ccccc-cccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecC-Ccc--CCCceEEeCCCeEEEEEEE-EcCCCC
Confidence 11000 000010101 1678999999999999988543 466666655 333 4557788999999999995 55 788
Q ss_pred CeEEEEECCEEeccCCCe---eE-----EeccceeeeEEE----eeeEEEEeecCCC--------CCCcccccccceeEE
Q psy15127 192 PTLHWKKNGQFIDLESSK---SL-----DLSRRTLGWLRV----RPLYWNVARPRAN--------LNPRYIGRKMASLLI 251 (633)
Q Consensus 192 ~~i~W~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~----~g~y~C~a~~~~~--------~~p~~~~~~~~~~~~ 251 (633)
+.|.|++++..+...... .. ......|.+..+ .|.|+|.|.|... ..|.+..........
T Consensus 258 p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~ 337 (423)
T 3qs7_E 258 FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYE 337 (423)
T ss_dssp CCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC---CEEC
T ss_pred cEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCCCccEE
Confidence 999999999876443111 00 111112222222 4899999999711 111111111123455
Q ss_pred ecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy15127 252 WNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 331 (633)
Q Consensus 252 ~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 331 (633)
+.+|+.+.|.|.+.|+|.|.+.|+|+|..+...... ......+.+.....+|+|.|+|.|.|..|..+.++.|.
T Consensus 338 v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~------~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~ 411 (423)
T 3qs7_E 338 IDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG------LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN 411 (423)
T ss_dssp CCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB------CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC
T ss_pred ecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc------ccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEE
Confidence 678999999999999999999999999988532100 00111222355677899999999999999999999999
Q ss_pred EEecccC
Q psy15127 332 VREFCVL 338 (633)
Q Consensus 332 v~~~~~~ 338 (633)
|...+..
T Consensus 412 v~~~p~~ 418 (423)
T 3qs7_E 412 IRSGTKH 418 (423)
T ss_dssp -------
T ss_pred EecCCcc
Confidence 9865443
No 34
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=3.1e-30 Score=253.08 Aligned_cols=261 Identities=25% Similarity=0.344 Sum_probs=198.1
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccC-CCeEEEEe-CCccCCCC--CeEEc----ccceEEEccCCCCCCeEEEEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDP-LPTILWRR-DDGKMPTG--RAKIL----DDRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~-~~~~i~~~--~~~~~----~~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
++.+...|.+..+.+|+.++|.|.+.+.+ .+.+.|+| +|..+... +.... ....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 56788899999999999999999999876 68999999 77777532 33332 2468999999999999999999
Q ss_pred EeCCce-EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCe-eEEeccceeee
Q psy15127 143 ENLVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK-SLDLSRRTLGW 220 (633)
Q Consensus 143 ~n~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~-~~~~~~~~~~~ 220 (633)
.|..|. .+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+...... ........+.+
T Consensus 82 ~n~~g~~~~~~~~l~v~~~-~~~~~~~~~~~~~~g~~v~l~C~-~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQK-LMFKNAPTPQEFKEGEDAVIVCD-VVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (291)
T ss_dssp ECTTSCEEEEEEEEEEECC-SEEEECCSSEEEETTSCEEECCE-EECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEE
T ss_pred EcCCCCeeEEEEEEEeecc-ccccCCCCcccccCCCeEEEEEE-eccCCCCEEEEEECCEEcccCCCceEEEccCCcEEE
Confidence 998854 577888888877 77778888889999999999999 578899999999999877543322 22223333333
Q ss_pred EE----EeeeEEEEeecCCCCC-------------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEe
Q psy15127 221 LR----VRPLYWNVARPRANLN-------------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLM 283 (633)
Q Consensus 221 ~~----~~g~y~C~a~~~~~~~-------------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~ 283 (633)
.. ..|.|+|.+.|..+.. |.+..........+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~ 239 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIEN 239 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcC
Confidence 22 2489999999865321 111111122234567899999999999999999999999998753
Q ss_pred ccCCccceEEEc-cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 284 FPGNAYGHLHVT-QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 284 ~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
.... ..+.... ....|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 240 ~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 240 EEED-DEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp C--C-CSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCC-CcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 2110 1233333 345799999999999999999999999999999988863
No 35
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=1.7e-30 Score=267.82 Aligned_cols=284 Identities=21% Similarity=0.290 Sum_probs=204.4
Q ss_pred eCceEEEc----CCCC--CCeEEEEEEe-------------cCcCCeee-eCCCceEEEcCCeEEEEEEE-eccCCCeEE
Q psy15127 46 FGSVLGAR----GALS--DDQWKLIAKE-------------ALIKPFPI-SEPSDATVLSGSVVEFVCRV-GGDPLPTIL 104 (633)
Q Consensus 46 ~~~~L~i~----~v~~--~G~Y~C~a~~-------------v~~~p~~~-~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~ 104 (633)
.+++|.|. +++. +|.|+|.|.| +..+|.+. ..+....+.+|+.++|.|.+ .+.|.+.+.
T Consensus 71 ~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~ 150 (404)
T 3p3y_A 71 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIF 150 (404)
T ss_dssp SSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEE
T ss_pred CCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEE
Confidence 45778775 6665 9999999988 33344432 33345789999999999999 788999999
Q ss_pred EEeCCccC-CC-CCeEEcccceEEEccCCCCC-CeEEEEEEEeCCceE---EEEEEEEEEee------ccccccCC---C
Q psy15127 105 WRRDDGKM-PT-GRAKILDDRSLQIENVGPQD-EGLYICDVENLVGSI---SLRASLTVHLL------RDDFRAEP---K 169 (633)
Q Consensus 105 W~~~~~~i-~~-~~~~~~~~~~L~i~~v~~~d-~G~Y~C~~~n~~g~~---s~~~~l~V~~~------~p~~~~~~---~ 169 (633)
|++++... .. .+.....++.|.|.+++.+| +|.|+|.+.|..+.. +..+.|.|... +|.+...+ .
T Consensus 151 W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~ 230 (404)
T 3p3y_A 151 WMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 230 (404)
T ss_dssp EECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEE
T ss_pred EeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCC
Confidence 99987543 33 34455567899999999999 599999999987763 22345666532 13333222 2
Q ss_pred ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE----eeeEEEEeecCCCCCCcc---c
Q psy15127 170 DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV----RPLYWNVARPRANLNPRY---I 242 (633)
Q Consensus 170 ~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~y~C~a~~~~~~~p~~---~ 242 (633)
...+.+|+.+.|.|. ..+.|.+.+.|+++|..+..... ........+.+..+ .|.|+|.|.|..+..... .
T Consensus 231 ~~~~~~G~~v~l~C~-~~g~p~~~v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (404)
T 3p3y_A 231 SQMVLRGMDLLLECI-ASGVPTPDIAWYKKGGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 308 (404)
T ss_dssp EEEEETTSCEEEECC-BCCSSCCEEEEEETTBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CceEecCCCEEEEEE-ECCCCCCcEEEEECCEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEE
Confidence 356889999999999 68889999999999988765433 22222333333222 489999999987642110 0
Q ss_pred c------cccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEE
Q psy15127 243 G------RKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCS 316 (633)
Q Consensus 243 ~------~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 316 (633)
. ........+..|+.++|.|.+.|.|.+.+.|+++|..+..... .... ...++.|.|.++..+|+|.|+|.
T Consensus 309 V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~--~~~~-~~~~~~L~i~~v~~~d~G~Y~C~ 385 (404)
T 3p3y_A 309 VKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPP--NPNR-EVAGDTIIFRDTQISSRAVYQCN 385 (404)
T ss_dssp EEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCC--CTTE-EEETTEEEESSCCSSCCCEEEEE
T ss_pred EeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCC--CceE-EecCCEEEEeecCHHHCEEEEEE
Confidence 0 1112234567899999999999999999999999998753211 1122 22456899999999999999999
Q ss_pred EEeCCceeEEEEEEEEEe
Q psy15127 317 ALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 317 a~n~~g~~~~~~~l~v~~ 334 (633)
|.|..|.....+.|.|.+
T Consensus 386 a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 386 TSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEETTEEEEEEEEEEEC-
T ss_pred EEeCCCcEEEEEEEEEEe
Confidence 999999999999998864
No 36
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=1e-29 Score=251.00 Aligned_cols=258 Identities=27% Similarity=0.418 Sum_probs=188.8
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEc--cc---ceEEEccCCC-CCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKIL--DD---RSLQIENVGP-QDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~--~~---~~L~i~~v~~-~d~G~Y~C~~ 142 (633)
..+|.|...|.+..+.+|+.++|.|.+.|.|.+.|+|+|+|..+...+.... .+ ..|.|.+++. +|+|.|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 4689999999999999999999999999999999999999998877665443 22 5799999998 9999999999
Q ss_pred EeCCceEEEEEEEEEEeec------cccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCC--eeEEec
Q psy15127 143 ENLVGSISLRASLTVHLLR------DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS--KSLDLS 214 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~~------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~--~~~~~~ 214 (633)
.|..|..+..+.|.|...+ |.+...+....+.+|+.+.|.|. ..|.|.+.+.|++++..+..... ......
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~-~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCA-ASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCE-EECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEE-CccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 9999998888999998752 45566677778999999999999 58889999999999998865322 111222
Q ss_pred cceeeeEEE----eeeEEEEeecCCCCCC----ccccc---cc------ceeEEecCCceEEEEEEEeeecCCeeEEEEC
Q psy15127 215 RRTLGWLRV----RPLYWNVARPRANLNP----RYIGR---KM------ASLLIWNHPRVNRLSCFAEGSPLPSVFWTQE 277 (633)
Q Consensus 215 ~~~~~~~~~----~g~y~C~a~~~~~~~p----~~~~~---~~------~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~ 277 (633)
...+.+..+ .|.|+|.|.|..+... .+... .. .....+..|+.++|.|.+.|.|.|.+.|+++
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~ 242 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQG 242 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEET
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEEC
Confidence 333333322 4899999999876421 11111 00 1112356789999999999999999999999
Q ss_pred CEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 278 GSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
|..+.... .. ......|.|.++ +|+|.|+|.|.|..|..+.++.|.|...
T Consensus 243 ~~~l~~~~-----~~-~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 292 (304)
T 2yd9_A 243 AEDLTPED-----DM-PVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSL 292 (304)
T ss_dssp TEECSCSS-----SC-CBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC----
T ss_pred CEECCCcc-----cc-cCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecC
Confidence 98774211 11 112224777765 6899999999999999999999998753
No 37
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=7.2e-30 Score=261.02 Aligned_cols=299 Identities=22% Similarity=0.284 Sum_probs=211.5
Q ss_pred CCCccccccceeeEEEEecccCCC--CCceEEeeCceEEEcCCC--C-CCeEEEEEEe-------------cCcCCeee-
Q psy15127 15 SPRAEIEPATRTNRVSISGDPGFD--SRRSRSIFGSVLGARGAL--S-DDQWKLIAKE-------------ALIKPFPI- 75 (633)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~v~--~-~G~Y~C~a~~-------------v~~~p~~~- 75 (633)
+|.+.|+|+ .+|.+... ..++.+ .+++|.|.++. . +|.|+|.|.| +...|.+.
T Consensus 34 ~p~~~v~W~-------k~g~~~~~~~~~~~~~-~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~ 105 (382)
T 1cs6_A 34 NPPATYRWK-------MNGTELKMGPDSRYRL-VAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSA 105 (382)
T ss_dssp ESCCEEEEE-------ETTEECCCSTTSSEEE-ETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCS
T ss_pred CCCCEEEEE-------ECCEECCcCCCccEEe-eCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccc
Confidence 455666643 34444332 345544 46899999987 3 9999999998 11222222
Q ss_pred eCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeCCccCC---CCCeEEc-ccceEEEccCCCCCCeEEEEEEEeCCceE-
Q psy15127 76 SEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRDDGKMP---TGRAKIL-DDRSLQIENVGPQDEGLYICDVENLVGSI- 149 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~~i~---~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~- 149 (633)
..+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ..+.... .++.|.|.+++.+|+|.|+|.+.|..|..
T Consensus 106 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~ 185 (382)
T 1cs6_A 106 EERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 185 (382)
T ss_dssp SCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred cCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEcccccc
Confidence 23456789999999999996 456888999999998752 2333333 34789999999999999999999876432
Q ss_pred ----EEEEEEEEEee-----cccccc-CCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccC---CCeeEEeccc
Q psy15127 150 ----SLRASLTVHLL-----RDDFRA-EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLE---SSKSLDLSRR 216 (633)
Q Consensus 150 ----s~~~~l~V~~~-----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~---~~~~~~~~~~ 216 (633)
+..+.|.|... +|.+.. .+....+.+|+.+.|.|. ..+.|.+.+.|++++..+... ....+.+.+.
T Consensus 186 ~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~-~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~ 264 (382)
T 1cs6_A 186 KSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECF-AFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNV 264 (382)
T ss_dssp EEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECE-EEEESCCEEEEEECCSCCSCCCSBSSSEEEECSC
T ss_pred ceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEE-EccCCCCEEEEEECCcccccEEecCCcEEEEccC
Confidence 22344554321 244433 456778899999999999 578899999999988765431 1122222222
Q ss_pred eeeeEEEeeeEEEEeecCCCCC-----------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEecc
Q psy15127 217 TLGWLRVRPLYWNVARPRANLN-----------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFP 285 (633)
Q Consensus 217 ~~~~~~~~g~y~C~a~~~~~~~-----------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~ 285 (633)
... ..|.|+|.|.|..+.. |.+.. ......+..|+.+.|.|.+.|.|.+.+.|+++|..+..
T Consensus 265 ~~~---d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~-- 337 (382)
T 1cs6_A 265 DFE---DEGTYECEAENIKGRDTYQGRIIIHAQPDWLD--VITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLAS-- 337 (382)
T ss_dssp CGG---GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE--CCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCC--
T ss_pred Chh---hCEEEEEEEEcCCCeEEEEEEEEEecCCCccc--CCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCC--
Confidence 222 2589999999987642 11111 11234566899999999999999999999999988742
Q ss_pred CCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 286 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 286 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
..++.. .++.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 338 ---~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 338 ---QNRIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ---CSSEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ---CceEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 133333 35689999999999999999999999999999998885
No 38
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=3.5e-29 Score=256.55 Aligned_cols=331 Identities=19% Similarity=0.205 Sum_probs=211.7
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEee---CceEEEcCCCC--CCeEEEEEEe------------cCcCCeeee
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIF---GSVLGARGALS--DDQWKLIAKE------------ALIKPFPIS 76 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~ 76 (633)
+.|.+.|+|+.......+.........|+.+.. +++|.|.+++. +|.|+|.|.| |..+|.+..
T Consensus 26 g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~ 105 (389)
T 2jll_A 26 GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFIS 105 (389)
T ss_dssp CSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECC
T ss_pred cccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEec
Confidence 456777886554212222222222245666543 46899999998 9999999988 566788877
Q ss_pred CCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC---CeEEcc---cceEEEccCCCCCCeEEEEEEEeCCceEE
Q psy15127 77 EPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG---RAKILD---DRSLQIENVGPQDEGLYICDVENLVGSIS 150 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~---~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s 150 (633)
.+....+.+|+.+.|.|.+.|.|.+.++|+|++..+... +..... ...|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 106 ~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 185 (389)
T 2jll_A 106 NQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRF 185 (389)
T ss_dssp SCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEE
T ss_pred CcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEE
Confidence 666667899999999999999999999999999988653 333332 34799999999999999999999999988
Q ss_pred EEEEEEEEeeccccccCCCceE--EecCCcEEEEEeCCC---CCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEee
Q psy15127 151 LRASLTVHLLRDDFRAEPKDTR--VASGETALLECGPPK---GQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRP 225 (633)
Q Consensus 151 ~~~~l~V~~~~p~~~~~~~~~~--~~~g~~~~l~C~~~~---~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 225 (633)
..+.|.|..+ |. .|.... ...+..+.|.|.... +.|...+
T Consensus 186 ~~~~l~v~~~-P~---~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y------------------------------- 230 (389)
T 2jll_A 186 QEYILALADV-PS---SPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHY------------------------------- 230 (389)
T ss_dssp EEEEEEECCC-CC---CCEEEEEEEECSSCEEEEEECCSCCTTSCEEEE-------------------------------
T ss_pred EEEEEEecCC-CC---CCcceEEeeccCCEEEEEEeCCCCCCCcceEEE-------------------------------
Confidence 8888877655 32 222221 123456667665211 1111100
Q ss_pred eEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE-ccCceEEEcC
Q psy15127 226 LYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-TQEGTLRIQG 304 (633)
Q Consensus 226 ~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~~~l~i~~ 304 (633)
.+.|.+++... ...... .....|.|.+
T Consensus 231 ---------------------------------------------~v~~~~~~~~~-------~~~~~~~~~~~~~~i~~ 258 (389)
T 2jll_A 231 ---------------------------------------------QVDVKEVASEI-------WKIVRSHGVQTMVVLNN 258 (389)
T ss_dssp ---------------------------------------------EEEEEETTCSC-------CEEEECSTTCSEEEECS
T ss_pred ---------------------------------------------EEEEEECCCcc-------cEEeeccCCcceEEECC
Confidence 12333332200 000000 0223577777
Q ss_pred CCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCccee
Q psy15127 305 VQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETS 384 (633)
Q Consensus 305 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~ 384 (633)
+...+.|.|.|.|.|..|....+..
T Consensus 259 l~~~~~y~~~v~A~N~~G~~~~s~~------------------------------------------------------- 283 (389)
T 2jll_A 259 LEPNTTYEIRVAAVNGKGQGDYSKI------------------------------------------------------- 283 (389)
T ss_dssp CCTTCEEEEEEEEEESSCBCCCCCC-------------------------------------------------------
T ss_pred ccCCCEEEEEEEEEcCCccCCCCcc-------------------------------------------------------
Confidence 7777777777777776664322211
Q ss_pred EEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeE-EEE
Q psy15127 385 WSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWV-VAA 463 (633)
Q Consensus 385 ~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~ 463 (633)
+.+...+. ..|.+| .+.......+++.|+|.++.+ +++++.+|.|+|+..+. ..|. ...
T Consensus 284 ----~~~~t~~~-----------~~p~~p-~~~~~~~~~~~v~l~W~~p~~---~~~~i~~Y~v~~~~~~~-~~~~~~~~ 343 (389)
T 2jll_A 284 ----EIFQTLPV-----------REPSPP-SIHGQPSSGKSFKLSITKQDD---GGAPILEYIVKYRSKDK-EDQWLEKK 343 (389)
T ss_dssp ----EEEECCCC-----------CCCCCC-CEEEEEETTTEEEEEECCCCC---CSSCCCEEEEEEEC------CCBCCE
T ss_pred ----eEEEecCC-----------CCCCCC-ccccccCcCCEEEEEEECCCC---CCCcccEEEEEEEeCCC-CcceeEee
Confidence 11111111 013344 345555688999999999863 36899999999998543 3343 222
Q ss_pred EeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecC
Q psy15127 464 HRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLG 508 (633)
Q Consensus 464 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~ 508 (633)
.......++|.+|.|++.|.|+|+|.|..|.|+++... ++|.+
T Consensus 344 ~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~--~~T~~ 386 (389)
T 2jll_A 344 VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYE--FSMPP 386 (389)
T ss_dssp ECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEE--EECCC
T ss_pred ccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeE--ecCCC
Confidence 33456789999999999999999999999999988653 55533
No 39
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=2.7e-29 Score=246.46 Aligned_cols=257 Identities=23% Similarity=0.330 Sum_probs=194.2
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe-CCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEe
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR-DDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~-~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.+|.+...+.++.+.+|+.++|.|.+.+.|. .+.|++ +|..+..+ +.....+ ..|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4688999999999999999999999998774 899999 67766543 3333333 4899999999999999999999
Q ss_pred CCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCe-eEEeccceeeeEE
Q psy15127 145 LVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK-SLDLSRRTLGWLR 222 (633)
Q Consensus 145 ~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~-~~~~~~~~~~~~~ 222 (633)
..|.. +..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+...... ........+.+..
T Consensus 82 ~~g~~~~~~~~l~v~~~-~~~~~~~~~~~v~~G~~v~l~C~-~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQK-LTFREVVSPQEFKQGEDAEVVCR-VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 159 (291)
T ss_dssp SSSCEEEEEEEEEEECC-CBCCSCCCSEEEETTSCEEECCC-CBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETT
T ss_pred ccCceEEEEEEEEecCC-cceEeCCCChhhcCCCCEEEEEE-EccCCCCEEEEEECCccccccCCceEEEccCCCEEEEe
Confidence 88875 56778888877 77777778888999999999999 678899999999999887653322 2222333333322
Q ss_pred E----eeeEEEEeecCCCC-------------CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEecc
Q psy15127 223 V----RPLYWNVARPRANL-------------NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFP 285 (633)
Q Consensus 223 ~----~g~y~C~a~~~~~~-------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~ 285 (633)
+ .|.|+|.+.+..+. +|.+..........+..|+.+.|.|.+.|.|.+.+.|+++|..+..
T Consensus 160 v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~-- 237 (291)
T 2wim_A 160 INKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE-- 237 (291)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCC--
T ss_pred cchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcC--
Confidence 2 48999999887632 2222222222234566899999999999999999999999987742
Q ss_pred CCccceEEEc-cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 286 GNAYGHLHVT-QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 286 ~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
..+.... .+..|.|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 238 ---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 238 ---NEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp ---TTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred ---CccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 1223332 356899999999999999999999999999999999875
No 40
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=2.4e-28 Score=260.62 Aligned_cols=312 Identities=15% Similarity=0.162 Sum_probs=201.7
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCC-------------CCCeEEcc---cceEEEccCCCCCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMP-------------TGRAKILD---DRSLQIENVGPQDE 135 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~-------------~~~~~~~~---~~~L~i~~v~~~d~ 135 (633)
++.+|..+.+.+|+.++|.|.+.+.|.+.+.|+|++ ..+. .+++.... ...|.|.+++.+|+
T Consensus 3 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (523)
T 2rcj_C 3 VLTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDE 82 (523)
T ss_pred ccccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhC
Confidence 345677889999999999999998889999999975 2211 12333221 24799999999999
Q ss_pred eEEEEEEEeCCce---EEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCC--CeEEEEECCEEeccCC
Q psy15127 136 GLYICDVENLVGS---ISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPE--PTLHWKKNGQFIDLES 207 (633)
Q Consensus 136 G~Y~C~~~n~~g~---~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~ 207 (633)
|.|+|.|.|..|. ....+.|.|.. .+|.+...+....+.+|+.+.|.|.+ .|.|+ +.|.|+++|..+....
T Consensus 83 G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~-~g~~p~~~~v~W~k~g~~l~~~~ 161 (523)
T 2rcj_C 83 SDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLI-SDFYPGAVTVAWKADGSPVKAGV 161 (523)
T ss_pred EEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEe-ccccCCceEEEEecCCCCCCCce
Confidence 9999999997653 34556777742 22666666666677789999999995 55544 3999999998775432
Q ss_pred CeeE--Eecc------ceeeeEE----EeeeEEEEeecCCCCCCcccc-------cccce------eEEecCCceEEEEE
Q psy15127 208 SKSL--DLSR------RTLGWLR----VRPLYWNVARPRANLNPRYIG-------RKMAS------LLIWNHPRVNRLSC 262 (633)
Q Consensus 208 ~~~~--~~~~------~~~~~~~----~~g~y~C~a~~~~~~~p~~~~-------~~~~~------~~~~~~g~~~~l~C 262 (633)
.... .... ..+.+.. ..|.|+|.|.|..+....... ...+. ......|+.+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C 241 (523)
T 2rcj_C 162 ETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGC 241 (523)
T ss_pred EeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEE
Confidence 1110 0011 1233332 258999999997653211110 00011 11235789999999
Q ss_pred EEeee-cCC-eeEEEECCEEEEeccCCccceEEE-----ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 263 FAEGS-PLP-SVFWTQEGSQVLMFPGNAYGHLHV-----TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 263 ~~~g~-p~~-~v~W~~~g~~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
.+.|. |.| .+.|+++|..+.... ..+... ...+.|.|.++..+| |.|+|.|.|..|.......+.+...
T Consensus 242 ~~~g~~P~p~~v~W~k~g~~~~~~~---~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~ 317 (523)
T 2rcj_C 242 LVKDYFPQPVTVSWNSGALTSGVHT---FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL 317 (523)
T ss_pred EEeceeCCCeEEEEecCCcccceEe---CCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC
Confidence 99887 777 899999997643110 011110 112379999999999 9999999999998765555543211
Q ss_pred c--------------------------cC-CC---ceEEeCCCccccCCC---------C------CceEEecccccCCE
Q psy15127 336 C--------------------------VL-PK---GTFTLGQPNLATGNS---------D------LRRIACDLRETDSG 370 (633)
Q Consensus 336 ~--------------------------~~-p~---p~~~~~~~~~~~g~p---------~------~~~~i~~~~~~d~g 370 (633)
+ .. |+ +.+.|.......... . ..+.|..+..+|+|
T Consensus 318 P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G 397 (523)
T 2rcj_C 318 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGK 397 (523)
T ss_pred ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCC
Confidence 1 00 11 244443332211000 0 11356667778999
Q ss_pred EEEEEEEcCCcceeEEEEEE
Q psy15127 371 LYTCTASSESGETSWSASLS 390 (633)
Q Consensus 371 ~y~c~a~n~~g~~~~~~~l~ 390 (633)
.|+|.|.|..|.......+.
T Consensus 398 ~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 398 EYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred eEEEEEeCCCCCCceeEEEE
Confidence 99999999988765555554
No 41
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.97 E-value=5.3e-30 Score=259.89 Aligned_cols=296 Identities=12% Similarity=0.111 Sum_probs=206.2
Q ss_pred cccCCCCCCCCCCccccccceeeEEEEeccc-------CCCCCceEEee------CceEEEcCCCC--CCeEEEEEEec-
Q psy15127 5 LDTNHAHPMSSPRAEIEPATRTNRVSISGDP-------GFDSRRSRSIF------GSVLGARGALS--DDQWKLIAKEA- 68 (633)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~~L~i~~v~~--~G~Y~C~a~~v- 68 (633)
+.+.|... +.|.+.|+|+...........+ .....|+.+.. +++|.|.+++. +|.|+|.|.|.
T Consensus 12 v~L~C~~~-~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 90 (363)
T 1wio_A 12 VELTCTAS-QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQK 90 (363)
T ss_dssp EEECCCCT-TCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETTEE
T ss_pred EEEEEEec-CCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEECC
Confidence 34455543 5678889977654321111111 12234555432 56799999998 99999999881
Q ss_pred -----CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEE
Q psy15127 69 -----LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 -----~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
... .+...| ...+.+|+.++|.|.+.+.|.|.++|++++..+ ...+..|.|.+++.+|+|.|+|.|.
T Consensus 91 ~~~~l~V~-~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~ 162 (363)
T 1wio_A 91 EEVQLLVF-GLTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVSQLELQDSGTWTCTVL 162 (363)
T ss_dssp EEEEEEEE-EEEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE------EEESSEEEECSBCGGGCEECEEEEE
T ss_pred CcEEEEEE-eCCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------cccceEEEEeeCChhcCCEEEEEEe
Confidence 111 122333 346899999999999988999999999987653 3356799999999999999999999
Q ss_pred eCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCC-----CCCCeEEEEECCEEeccC-------CCeeE
Q psy15127 144 NLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKG-----QPEPTLHWKKNGQFIDLE-------SSKSL 211 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-----~p~~~i~W~~~~~~~~~~-------~~~~~ 211 (633)
|..+..+..+.|.|..+ |.. +....+.+|+.+.|.|.+ .+ .|.+.+.|+++|..+... .....
T Consensus 163 ~~~~~~~~~~~l~v~~~-p~~---~~~~~~~~G~~v~l~C~~-~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~ 237 (363)
T 1wio_A 163 QNQKKVEFKIDIVVLAF-QKA---SSIVYKKEGEQVEFSFPL-AFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVS 237 (363)
T ss_dssp ETTEEEEECCEECEECC-SCS---EEEEEEETBCCEEEECCC-CCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEE
T ss_pred cCCCeEEEEEEEEEecC-CCC---CCceEEecCCEEEEEEEE-ecccccCCCceeEEEecCCCCccceEEEEEecCCeee
Confidence 98777777778888765 332 255678899999999984 44 778899999999876542 22111
Q ss_pred Ee-----------c--cceeeeEEE----eeeEEEEeecC--CCCCCcccccccceeEEecCCceEEEEEEEeeecCCe-
Q psy15127 212 DL-----------S--RRTLGWLRV----RPLYWNVARPR--ANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPS- 271 (633)
Q Consensus 212 ~~-----------~--~~~~~~~~~----~g~y~C~a~~~--~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~- 271 (633)
.. . ...+.+..+ .|.|+|.|.|. .+... ....-.+....|+.+.|.|.+.|.|+|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~----~~~~l~V~~v~g~~~~l~C~~~g~p~p~~ 313 (363)
T 1wio_A 238 VKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLH----QEVNLVVMRATQLQKNLTCEVWGPTSPKL 313 (363)
T ss_dssp EEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEE----EEEEEEEEEECCCSSSEEEEEESSCCTTC
T ss_pred ccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEE----EEEeEEEEEecCCCeeEEEEEccccCCCc
Confidence 10 1 113333222 48999999999 66321 1111111123489999999999999988
Q ss_pred -eEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 272 -VFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 272 -v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
+.|+++|..+. ....|.|.++..+|+|.|+|.|.|. |....+..+.|
T Consensus 314 ~i~W~~~~~~~~-------------~~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 314 MLSLKLENKEAK-------------VSKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp CEEEECSSSSCS-------------EEESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred cEEEEeCCCcee-------------eeeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 99999997553 1346788999999999999999964 55556666655
No 42
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=7.4e-31 Score=294.04 Aligned_cols=432 Identities=16% Similarity=0.132 Sum_probs=101.0
Q ss_pred CceEEEcCCCC--CCeEEEEEEe----------cC--cCCee---eeCCCceEEEcC--CeEEEEEEEeccCCCeEEEEe
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE----------AL--IKPFP---ISEPSDATVLSG--SVVEFVCRVGGDPLPTILWRR 107 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~----------v~--~~p~~---~~~~~~~~~~~G--~~~~L~C~~~~~p~p~i~W~~ 107 (633)
.++|.|.+++. +|.|+|.+.. +. ..|.+ ...+..+.+.+| +.++|.|.+.+ |.+.++|++
T Consensus 85 ~~~l~I~~~~~~d~G~Y~C~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~ 163 (772)
T 3v2a_R 85 CKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCA 163 (772)
T ss_dssp -----------------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEE
T ss_pred EEEEEECCCcHhhCEeEEEEEcCCCEEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEEe
Confidence 45899999998 9999999865 11 12222 123455678889 99999999976 778999999
Q ss_pred C--CccC-CCCC-eEEcccceEEEccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEee-ccccccCCC-ceEEecCCcEE
Q psy15127 108 D--DGKM-PTGR-AKILDDRSLQIENVGPQDEGLYICDVENLVGSI-SLRASLTVHLL-RDDFRAEPK-DTRVASGETAL 180 (633)
Q Consensus 108 ~--~~~i-~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~~-~p~~~~~~~-~~~~~~g~~~~ 180 (633)
+ +..+ ..+. ........|.|.+++.+|+|.|+|.+.+..... +....+.+... .+.+.+.+. ...+.+|+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~ 243 (772)
T 3v2a_R 164 RYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLV 243 (772)
T ss_dssp ETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEE
T ss_pred cCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEE
Confidence 7 5544 3332 333445789999999999999999999765442 22244444432 233444443 46899999999
Q ss_pred EEEeCCCC--CCCCeEEEEECCEEeccCCCeeE----------EeccceeeeEE----EeeeEEEEeecCCCCC------
Q psy15127 181 LECGPPKG--QPEPTLHWKKNGQFIDLESSKSL----------DLSRRTLGWLR----VRPLYWNVARPRANLN------ 238 (633)
Q Consensus 181 l~C~~~~~--~p~~~i~W~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~g~y~C~a~~~~~~~------ 238 (633)
|.|.+ .+ .+.+.+.|++++..+........ ......+.+.. ..|.|+|.+.|..+..
T Consensus 244 L~C~~-~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l 322 (772)
T 3v2a_R 244 LNCTA-RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFV 322 (772)
T ss_dssp EEEEE-EECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEE
T ss_pred EEEEE-ecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEE
Confidence 99995 44 55679999999887543221110 11111222211 1479999999876521
Q ss_pred -----Ccccccc-cceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeE
Q psy15127 239 -----PRYIGRK-MASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGF 312 (633)
Q Consensus 239 -----p~~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 312 (633)
|.+.... ......+..|+.++|.|.+.|.|.+.+.|+++|..+.. +........|.|.++..+|+|.
T Consensus 323 ~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~-------~~~~~~~~~L~i~~v~~~d~G~ 395 (772)
T 3v2a_R 323 RVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLES-------NHTIKAGHVLTIMEVSERDTGN 395 (772)
T ss_dssp EEECCCC-------------------------------------------------------------------------
T ss_pred EEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCC-------CceEccceeEEEecCChhcCce
Confidence 2111111 12234567889999999999999999999999987742 2222245789999999999999
Q ss_pred EEEEEEeCCceeE--EEEEEEEEecccC---------------------------CCce-EEeCCCcc------------
Q psy15127 313 FVCSALSVAGSTT--VRAFLQVREFCVL---------------------------PKGT-FTLGQPNL------------ 350 (633)
Q Consensus 313 Y~C~a~n~~g~~~--~~~~l~v~~~~~~---------------------------p~p~-~~~~~~~~------------ 350 (633)
|+|.|.|..|... ..+.|.|...+.+ |.|. +.|.....
T Consensus 396 Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~ 475 (772)
T 3v2a_R 396 YTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVS 475 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCcccccccccccc
Confidence 9999999988653 3445555433222 2222 44432100
Q ss_pred ----------------ccCCCC-----------------CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCC
Q psy15127 351 ----------------ATGNSD-----------------LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGP 397 (633)
Q Consensus 351 ----------------~~g~p~-----------------~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 397 (633)
..|+.. ..+.+..+ +|+|.|+|.|.|..|..+..+.|.|..+|..
T Consensus 476 ~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 553 (772)
T 3v2a_R 476 VTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEI 553 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCcee
Confidence 001100 11233333 6899999999999999888888888865543
Q ss_pred CceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEE-EEecCCCCeEEEEE---e--eeeceE
Q psy15127 398 HAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEY-FSSDLQTGWVVAAH---R--ITSTSI 471 (633)
Q Consensus 398 ~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~-~~~~~~~~~~~~~~---~--~~~~~~ 471 (633)
.. .+......+....+.+.........+.|....... .......+.. ........|..... . .....+
T Consensus 554 ~~---~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 627 (772)
T 3v2a_R 554 TL---QPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQP---LPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIM 627 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ec---cCCcccccCCceEEEEeccCCCCCCcEEEEcCCcc---cccccCcccccccccccceeeccceeeecCCCceEEE
Confidence 11 11111112222222232222334456665432110 0000000000 00000000100000 0 012348
Q ss_pred EEecCCCCCeEEEEEEEEeccccC
Q psy15127 472 TVSDLKPDTSYMFIVRAENSHGLG 495 (633)
Q Consensus 472 ~i~~L~p~~~Y~~~v~a~n~~G~g 495 (633)
.|.++...+.+.|+|.|.|..|..
T Consensus 628 ~i~~~~~~d~G~Y~C~a~n~~~~~ 651 (772)
T 3v2a_R 628 ELKNASLQDQGDYVCLAQDRKTKK 651 (772)
T ss_dssp ------------------------
T ss_pred EECCCCccCCcEEEEEEEeCCCCe
Confidence 899999999999999999976554
No 43
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=2.8e-29 Score=249.52 Aligned_cols=258 Identities=17% Similarity=0.227 Sum_probs=189.0
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCCCCCeEEc--ccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPTGRAKIL--DDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|.. +.+..+.+|+.++|.|.+.+. |.+.++|+|++..+..+..... ....|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~~~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 5 FTGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp SSCCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred cCCCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 35677774 446889999999999999887 7889999999998875433222 2368999999999999999999999
Q ss_pred CceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCC----------CCCCeEEEEECCEEeccCCCeeEEecc
Q psy15127 146 VGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKG----------QPEPTLHWKKNGQFIDLESSKSLDLSR 215 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~----------~p~~~i~W~~~~~~~~~~~~~~~~~~~ 215 (633)
.|..+..+.|.|..+ |.+...+....+..|+.+.|.|. ..+ .|.+.+.|++++..+............
T Consensus 84 ~g~~~~~~~l~v~~~-~~~~~~~~~~~~~~g~~~~l~c~-~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 161 (317)
T 2y25_A 84 RGKDKSRLKLVDEAF-KELMMEVCKKIALSATDLKIQST-AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTG 161 (317)
T ss_dssp SCEEEEEECCSTHHH-HHHHHHHHHHHHTCBCCCEEEEC-SSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECS
T ss_pred CCcEEEEEEEEEecC-ccccccCCceecccCCCeEEEee-ccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccC
Confidence 998877777776655 44333333444556777777776 344 789999999999888755443333222
Q ss_pred ce--eeeEEE----eeeEEEEeecCCCCCCc------------------------------ccccccceeEEecCCceEE
Q psy15127 216 RT--LGWLRV----RPLYWNVARPRANLNPR------------------------------YIGRKMASLLIWNHPRVNR 259 (633)
Q Consensus 216 ~~--~~~~~~----~g~y~C~a~~~~~~~p~------------------------------~~~~~~~~~~~~~~g~~~~ 259 (633)
.. +.+..+ .|.|+|.+.|..+.... ...........+..|+.+.
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 241 (317)
T 2y25_A 162 EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALN 241 (317)
T ss_dssp SEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBC
T ss_pred CEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEE
Confidence 22 333222 48999999997652210 0011122345677899999
Q ss_pred EEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccC-c---eEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 260 LSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE-G---TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 260 l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~-~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
|.|.+.|+|.+.+.|+++|..+.. ..+..+... + .|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 242 l~C~~~g~p~p~i~W~~~g~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 242 LTCNVWGDPPPEVSWLKNEKALAS-----DDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EEEEEECSSCCEEEEEESSSEECC-----CSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEecCCCCEEEEEECCEeCCC-----CCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 999999999999999999988742 123333322 3 899999999999999999999999999999998873
No 44
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=7.9e-29 Score=251.24 Aligned_cols=297 Identities=16% Similarity=0.139 Sum_probs=204.8
Q ss_pred ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC---------------CCCeEEc------ccceEEEccCCCCCCeEE
Q psy15127 80 DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP---------------TGRAKIL------DDRSLQIENVGPQDEGLY 138 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~---------------~~~~~~~------~~~~L~i~~v~~~d~G~Y 138 (633)
.+.+.+|+.++|.|.+.+.|.+.+.|+|++..+. ..+.... .+..|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 3578999999999999989999999999986421 1222222 245799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecccee
Q psy15127 139 ICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTL 218 (633)
Q Consensus 139 ~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 218 (633)
+|.|.|.. ..+.|.|... ...|. ..+.+|+.+.|.|. ..+.|.+.+.|++++..+.. ....+.+.+...
T Consensus 83 ~C~~~n~~----~~~~l~V~~~----~~~~~-~~v~~G~~v~l~C~-~~~~p~~~v~W~~~~~~~~~-~~~~L~i~~v~~ 151 (363)
T 1wio_A 83 ICEVEDQK----EEVQLLVFGL----TANSD-THLLQGQSLTLTLE-SPPGSSPSVQCRSPRGKNIQ-GGKTLSVSQLEL 151 (363)
T ss_dssp EEEETTEE----EEEEEEEEEE----EESSC-SSEESBSCEEEEEE-CCTTCCCCEEEECSSSCEEE-ESSEEEECSBCG
T ss_pred EEEEEECC----CcEEEEEEeC----CCCCc-eEEecCCCEEEEEE-cCCCCCCeEEEEcCCCcccc-cceEEEEeeCCh
Confidence 99998763 3566666653 12222 36789999999999 56789999999999765432 112233332222
Q ss_pred eeEEEeeeEEEEeecCCCCC---Cccc---ccccceeEEecCCceEEEEEEEee-----ecCCeeEEEECCEEEEeccC-
Q psy15127 219 GWLRVRPLYWNVARPRANLN---PRYI---GRKMASLLIWNHPRVNRLSCFAEG-----SPLPSVFWTQEGSQVLMFPG- 286 (633)
Q Consensus 219 ~~~~~~g~y~C~a~~~~~~~---p~~~---~~~~~~~~~~~~g~~~~l~C~~~g-----~p~~~v~W~~~g~~~~~~~~- 286 (633)
. ..|.|+|.|.+..+.. ..+. .........+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.....
T Consensus 152 ~---d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~ 228 (363)
T 1wio_A 152 Q---DSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWIT 228 (363)
T ss_dssp G---GCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEE
T ss_pred h---cCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEE
Confidence 2 2589999998764421 0111 111224556778999999998887 78899999999976532000
Q ss_pred --CccceEEEc-----------c--CceEEEcCCCCCCCeEEEEEEEeC--CceeEEEEEEEEEecc-----------cC
Q psy15127 287 --NAYGHLHVT-----------Q--EGTLRIQGVQKEDAGFFVCSALSV--AGSTTVRAFLQVREFC-----------VL 338 (633)
Q Consensus 287 --~~~~~~~~~-----------~--~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~~-----------~~ 338 (633)
....++... . ...|.|.++..+|+|.|+|.|.|. .|..+..+.|.|..+. ..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~ 308 (363)
T 1wio_A 229 FDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGP 308 (363)
T ss_dssp EEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESS
T ss_pred EEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccc
Confidence 001222221 2 348999999999999999999999 9998888888887432 33
Q ss_pred CCce--EEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEee
Q psy15127 339 PKGT--FTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVE 392 (633)
Q Consensus 339 p~p~--~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 392 (633)
|+|. +.|........ ....+.|..+..+|+|.|+|.|.|. |....+..|.|.
T Consensus 309 p~p~~~i~W~~~~~~~~-~~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 309 TSPKLMLSLKLENKEAK-VSKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp CCTTCCEEEECSSSSCS-EEESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred cCCCccEEEEeCCCcee-eeeeeeeeeeccccceeEEEEEecC-CeEEEecceEec
Confidence 4555 66655443221 1234578899999999999999964 455556666653
No 45
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.96 E-value=1.3e-27 Score=235.46 Aligned_cols=266 Identities=16% Similarity=0.174 Sum_probs=183.6
Q ss_pred EEecCCceEEEEEEEeee-------cCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCc
Q psy15127 250 LIWNHPRVNRLSCFAEGS-------PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG 322 (633)
Q Consensus 250 ~~~~~g~~~~l~C~~~g~-------p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 322 (633)
.++..|++++|.|.+.+. |.+.+.|.++|..+.. .. .+......+.|.|.++...| |.|+|.|.+. |
T Consensus 14 ~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~---~~-~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g 87 (303)
T 1i1r_A 14 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK---EQ-YTIINRTASSVTFTDIASLN-IQLTCNILTF-G 87 (303)
T ss_dssp CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCG---GG-CEEEETTEEEEEECSCCCSE-EEEEEEEEET-T
T ss_pred ceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECCh---hh-eeeeCCcEEEEEEcCcCCCc-eEEEEecccC-C
Confidence 457789999999999864 7789999999987631 11 11111123479999998874 8999998774 3
Q ss_pred eeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceec
Q psy15127 323 STTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHR 402 (633)
Q Consensus 323 ~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~ 402 (633)
...... ..+.|.+..+
T Consensus 88 ~~~~~~--------------------------------------------------------~~~~l~v~~~-------- 103 (303)
T 1i1r_A 88 QLEQNV--------------------------------------------------------YGITIISGLP-------- 103 (303)
T ss_dssp TEEEEE--------------------------------------------------------EEEEEEEECC--------
T ss_pred CcceEE--------------------------------------------------------EEEEEeccCC--------
Confidence 222111 0122333333
Q ss_pred CCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecC-CCCCe
Q psy15127 403 MPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDL-KPDTS 481 (633)
Q Consensus 403 ~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~~~ 481 (633)
|++|..+.+.....+++.++|.++... + .+.+|.|+|+..+. ..|...........++|.+| .|++.
T Consensus 104 -------P~~P~~l~~~~~~~~~v~l~W~~~~~~---~-~~~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~i~~L~~p~t~ 171 (303)
T 1i1r_A 104 -------PEKPKNLSCIVNEGKKMRCEWDGGRET---H-LETNFTLKSEWATH-KFADCKAKRDTPTSCTVDYSTVYFVN 171 (303)
T ss_dssp -------CCCCEEEEEEEETTSCCEEEEECCSCC---S-SCCEEEEEEEETTE-ECCCEECCSSCTTEEECSSCCCTTSC
T ss_pred -------CCCCeeeEEEECCCCcEEEEccCCCCC---C-CCcCEEEEEEecCC-CCccCCCcCCCceEEEECCcCccccc
Confidence 345777777777778999999999854 2 35799999986542 22222222334578999999 99999
Q ss_pred EEEEEEEEeccccCCCCCCCCceeecC-CCCCCCcchHHHHHHHhCCceEEeeeeeec--ccceEEEEEEEecCCCcccc
Q psy15127 482 YMFIVRAENSHGLGIPSPVSPITRTLG-LNSLVPQHLLDEARARLGTKVVNLRELIPT--ASTAVRITWEVSWGSVPQHL 558 (633)
Q Consensus 482 Y~~~v~a~n~~G~g~~s~~~~~~~t~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~si~v~W~~p~~~~p~~~ 558 (633)
|.|+|.|.|..|.+..+... +.+.. .+|.+|..+ .+..+ +.+++.|+|++|
T Consensus 172 Y~f~V~A~N~~G~~~s~~~~--~~~~~~~~p~pP~~~----------------~v~~~~~~~~sv~l~W~~p-------- 225 (303)
T 1i1r_A 172 IEVWVEAENALGKVTSDHIN--FDPVYKVKPNPPHNL----------------SVINSEELSSILKLTWTNP-------- 225 (303)
T ss_dssp EEEEEEEEETTEEEECCCEE--ECGGGGEECCCCEEE----------------EEECCSSSSSCEEEEEECC--------
T ss_pred EEEEEEEEcCCCCcccCCEE--ECHHHeEecCCCcce----------------EEEEecCCCCEEEEEECCC--------
Confidence 99999999999998643221 22222 234444433 45443 679999999965
Q ss_pred cchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 559 LDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 559 ~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
...++.+++| .|+|+..+... |....... .....++++|.+|+|++.|.|+|+|.|.+|.|++|+
T Consensus 226 ~~~~~~i~~Y-~v~y~~~~~~~-------w~~~~~~~--~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~ 290 (303)
T 1i1r_A 226 SIKSVIILKY-NIQYRTKDAST-------WSQIPPED--TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290 (303)
T ss_dssp GGGGTSCEEE-EEEEEETTCSS-------CEECCGGG--GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCC
T ss_pred CCCCcccEEE-EEEEEeCCCCC-------ceEEcccc--CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCC
Confidence 3457889999 99999886433 75432110 134578899999999999999999999999999985
No 46
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=9.6e-28 Score=237.93 Aligned_cols=252 Identities=18% Similarity=0.236 Sum_probs=181.9
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCC-----eEEEEeCCccCC--------------CCCeEEc--------ccceEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLP-----TILWRRDDGKMP--------------TGRAKIL--------DDRSLQ 126 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p-----~i~W~~~~~~i~--------------~~~~~~~--------~~~~L~ 126 (633)
++..|..+.+..|++++|.|.+.+.+.+ .|+|+|++.... ..+.... .+.+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 5677888889999999999999876655 489999886431 1122221 235799
Q ss_pred EccCCCCCCeEEEEEEEe-CCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEecc
Q psy15127 127 IENVGPQDEGLYICDVEN-LVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDL 205 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n-~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~ 205 (633)
|.+++.+|+|.|+|.+.+ ..+..+..+.|.|... |.+...+....+..|+.+.+.|.+..+.|.+.+.|++++..+..
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~-P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~ 161 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK-PQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN 161 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBC-CEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccC-CcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccc
Confidence 999999999999999864 4566778888888777 66666666667778899999998667899999999999876643
Q ss_pred CCCeeEEecccee---eeEE-------EeeeEEEEeecCCCCCCccc-----cc-------ccceeEEecCCceEEEEEE
Q psy15127 206 ESSKSLDLSRRTL---GWLR-------VRPLYWNVARPRANLNPRYI-----GR-------KMASLLIWNHPRVNRLSCF 263 (633)
Q Consensus 206 ~~~~~~~~~~~~~---~~~~-------~~g~y~C~a~~~~~~~p~~~-----~~-------~~~~~~~~~~g~~~~l~C~ 263 (633)
..... ....... ..+. ..|.|+|.|.|..+...... .. ..........|+.++|.|.
T Consensus 162 ~~~~~-~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~ 240 (313)
T 4fqp_A 162 TSQVP-GFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCD 240 (313)
T ss_dssp EEEEE-CSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEE
T ss_pred cceee-eecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEE
Confidence 21111 1111111 1111 13689999999765432110 00 0111223456789999999
Q ss_pred EeeecCC-eeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 264 AEGSPLP-SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 264 ~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
+.|+|.| .+.|+++|..+.. .....+++|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+.
T Consensus 241 ~~g~P~p~~v~W~~~~~~l~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 305 (313)
T 4fqp_A 241 ARSNPEPTGYNWSTTMGPLPP--------FAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEG 305 (313)
T ss_dssp EEEESCCCEEEEEETTBSCCT--------TEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred ecCCCCCcEEEEEECCEECCC--------ceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeC
Confidence 9999999 6999999986631 12234568999999999999999999999999999999999863
No 47
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.8e-27 Score=231.88 Aligned_cols=252 Identities=15% Similarity=0.163 Sum_probs=182.4
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
..+|.|...+....+.+|+.++|.|.+.+ .++|+|++..+ ......++.|.|.+++.+|+|.|+|.|.| |.
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~ 80 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN---EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL 80 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS---CEEEECSSEEEETTCCGGGCEEEEEEESS--SC
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce---eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc
Confidence 35688888888899999999999999987 89999999877 22223347999999999999999999999 44
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEE-ECCEEeccCCCeeEEeccceeeeEEE---
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWK-KNGQFIDLESSKSLDLSRRTLGWLRV--- 223 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (633)
+..+.|.|..+ |.+...+....+.+|+.+.|.|.+ .+ |. +.+.|+ ++|..+.... .........+.+..+
T Consensus 81 -~~~~~l~V~~~-~~~~~~~~~~~~~~g~~v~l~C~~-~~-p~~~~v~W~~~~g~~l~~~~-~~~~~~~~~L~i~~v~~~ 155 (290)
T 2o26_X 81 -TSSIYVFVRDP-AKLFLVGLPLFGKEDSDALVRCPL-TD-PQVSQYSLIECDGKSLPTDL-TFVPNPKAGITIKNVKRA 155 (290)
T ss_dssp -EEEEEEEEECS-SCCBCCCCCEEEETTSCEEECCCB-SC-CSCEEEEEEETTSCCCCTTC-EEEEETTTEEEEESCCGG
T ss_pred -cEEEEEEEeCC-CcccccccceEEecCCeEEEeCcC-CC-CCCceEEEEeCCCcCCCCCC-ceeeCCCCCEEEecccHH
Confidence 77888999887 555566777888999999999995 45 77 899995 6777665432 222222334444333
Q ss_pred -ee-eEEEEeecCCCCCC--cccc------------cccceeEEecCCceEEEEEEEeeecCCe-eEEEECCEEE----E
Q psy15127 224 -RP-LYWNVARPRANLNP--RYIG------------RKMASLLIWNHPRVNRLSCFAEGSPLPS-VFWTQEGSQV----L 282 (633)
Q Consensus 224 -~g-~y~C~a~~~~~~~p--~~~~------------~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~g~~~----~ 282 (633)
.| .|+|.|.|..+... .+.. ........+..|+.++|.|.+.|.|.+. +.|+++|..+ .
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~ 235 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQ 235 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCC
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCcccee
Confidence 48 99999998754310 0100 0111123566889999999999999996 9999999763 1
Q ss_pred eccCCcc-ceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 283 MFPGNAY-GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 283 ~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
....... .+......+.|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 236 VKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp EECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred ecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 1110000 000223456899999999999999999999999999988888864
No 48
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.95 E-value=1.8e-28 Score=245.66 Aligned_cols=254 Identities=21% Similarity=0.274 Sum_probs=114.5
Q ss_pred eCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRAS 154 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~ 154 (633)
..+....+.+|+.++|.|.+.+. |.+.+.|+|+|..+..+.+....++.|.|.+++.+|+|.|+|.+.|. |..+..+.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~ 91 (334)
T 1ry7_B 13 GQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS 91 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEE
Confidence 34788889999999999999876 67899999999988765545556789999999999999999999998 77777888
Q ss_pred EEEEeec---------------------cccccC----CCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCe
Q psy15127 155 LTVHLLR---------------------DDFRAE----PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK 209 (633)
Q Consensus 155 l~V~~~~---------------------p~~~~~----~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 209 (633)
|.|...+ |.+..+ +....+.+|+.+.|.|. ..|.|.+.+.|++++..+......
T Consensus 92 l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~-~~g~p~~~v~W~~~~~~~~~~~~~ 170 (334)
T 1ry7_B 92 VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCP-AAGNPTPSISWLKNGREFRGEHRI 170 (334)
T ss_dssp ---------------------------CCCCSCCTTCCCCEEEEETTCCEEEECC-CCCSSCCEEECCBTTBCCCTTSST
T ss_pred EEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEE-ccCCCCCeEEEEECCEECcccccc
Confidence 8887541 222221 22357889999999999 678899999999999877644321
Q ss_pred ---eEEeccceeeeEE----EeeeEEEEeecCCCCC--------------CcccccccceeEEecCCceEEEEEEEeeec
Q psy15127 210 ---SLDLSRRTLGWLR----VRPLYWNVARPRANLN--------------PRYIGRKMASLLIWNHPRVNRLSCFAEGSP 268 (633)
Q Consensus 210 ---~~~~~~~~~~~~~----~~g~y~C~a~~~~~~~--------------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p 268 (633)
........+.+.. ..|.|+|.+.|..+.. +............+..|+.+.|.|.+.|.|
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p 250 (334)
T 1ry7_B 171 GGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDA 250 (334)
T ss_dssp TCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSS
T ss_pred cceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCC
Confidence 1111122232222 2489999999876521 011111122345677899999999999999
Q ss_pred CCeeEEEE----CCEEEEeccCCccceEEEc----------cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 269 LPSVFWTQ----EGSQVLMFPGNAYGHLHVT----------QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 269 ~~~v~W~~----~g~~~~~~~~~~~~~~~~~----------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
.+.+.|++ +|..+.... ....... ....|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 251 ~p~v~W~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 327 (334)
T 1ry7_B 251 QPHIQWLKHVEVNGSKVGPDG---TPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP 327 (334)
T ss_dssp CEEEEEEECCCGGGCSBCTTS---SBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEEC
T ss_pred CCeEEEEECCcCCCccccCCC---CeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEE
Confidence 99999999 665543111 0011111 123799999999999999999999999999999999985
No 49
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=8.5e-28 Score=238.63 Aligned_cols=256 Identities=17% Similarity=0.158 Sum_probs=186.5
Q ss_pred CCCceEEEcCCeEEEEEEEeccC-CCeEEEEeCCccCC----CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEE
Q psy15127 77 EPSDATVLSGSVVEFVCRVGGDP-LPTILWRRDDGKMP----TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISL 151 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~~~~~i~----~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~ 151 (633)
....+.+.+|+.+.|.|.+.+.+ .+.|.|+|++..+. ...+....++.|.|.+++.+|+|.|+|.|.|..|....
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (315)
T 1itb_B 11 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI 90 (315)
T ss_dssp CCCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCE
T ss_pred CceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEE
Confidence 34577899999999999998877 78999999987542 22233334569999999999999999999999888777
Q ss_pred EEEEEEEeeccccccCCC---ceEEecCCcEEEEEeCC-----CCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE
Q psy15127 152 RASLTVHLLRDDFRAEPK---DTRVASGETALLECGPP-----KGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV 223 (633)
Q Consensus 152 ~~~l~V~~~~p~~~~~~~---~~~~~~g~~~~l~C~~~-----~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (633)
.+.+.+...+|.+...+. ...+..|+.+.|.|.+. .|.|.+.+.|++++..+...... .......+.+..+
T Consensus 91 ~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~-~~~~~~~L~i~~v 169 (315)
T 1itb_B 91 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH-FSGVKDRLIVMNV 169 (315)
T ss_dssp ECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSS-EEEETTEEEESSC
T ss_pred EEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccce-EeecCceEEEEec
Confidence 777776665465544433 35678999999999952 88999999999999998654332 2223334433322
Q ss_pred ----eeeEEEEee-cCCCCC------------------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEE
Q psy15127 224 ----RPLYWNVAR-PRANLN------------------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQ 280 (633)
Q Consensus 224 ----~g~y~C~a~-~~~~~~------------------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~ 280 (633)
.|.|+|.|. +..+.. +............+..|+.+.|.|.+.|.|.|.+.|+++|..
T Consensus 170 ~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~ 249 (315)
T 1itb_B 170 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 249 (315)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEE
T ss_pred eehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEE
Confidence 489999999 555422 111111111224677899999999999999999999999998
Q ss_pred EEeccCCcc-ceEEEc---------cCceEEEcCCCCCC-CeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 281 VLMFPGNAY-GHLHVT---------QEGTLRIQGVQKED-AGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 281 ~~~~~~~~~-~~~~~~---------~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
+........ ...... ..+.|.|.++..+| +|.|+|.|.|..|....++.|.|.
T Consensus 250 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 250 IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 753211110 111111 12379999999999 999999999999999999888774
No 50
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.7e-26 Score=228.91 Aligned_cols=249 Identities=14% Similarity=0.128 Sum_probs=179.6
Q ss_pred CCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeCCceEEEE
Q psy15127 78 PSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENLVGSISLR 152 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~ 152 (633)
+..+.+.+|+.+.|.|... +.|.+.++|+|++..+..+ +.....+ ..|.|.+++.+|+|.|+|.+.|..|... .
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s 86 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-S 86 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-E
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-E
Confidence 3456788999999999885 5788999999999998754 4443332 5899999999999999999999887544 5
Q ss_pred EEEEEEee-----------ccccccCCC-ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEec--cce-
Q psy15127 153 ASLTVHLL-----------RDDFRAEPK-DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLS--RRT- 217 (633)
Q Consensus 153 ~~l~V~~~-----------~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~--~~~- 217 (633)
+.|.|... +|.+...+. ...+.+|+.+.|.|.+..+.|.+.+.|++++..+.......+... ...
T Consensus 87 ~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~ 166 (312)
T 2y23_A 87 YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGII 166 (312)
T ss_dssp EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEE
T ss_pred EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEE
Confidence 55665430 244444333 678889999999999655899999999999999876544333221 111
Q ss_pred -eeeEE----EeeeEEEEeecCCCCCCc----------------------ccccccc-----eeEEecCCceEEEEEEEe
Q psy15127 218 -LGWLR----VRPLYWNVARPRANLNPR----------------------YIGRKMA-----SLLIWNHPRVNRLSCFAE 265 (633)
Q Consensus 218 -~~~~~----~~g~y~C~a~~~~~~~p~----------------------~~~~~~~-----~~~~~~~g~~~~l~C~~~ 265 (633)
+.+.. ..|.|+|.+.+....... ......+ ....+..|+.+.|.|.+.
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~ 246 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVA 246 (312)
T ss_dssp EEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEc
Confidence 22222 248999988764322100 0000001 124677899999999999
Q ss_pred eecCC-eeEEEECCEEEEeccCCccceEEE-ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 266 GSPLP-SVFWTQEGSQVLMFPGNAYGHLHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 266 g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
|.|++ .+.|+++|..+.... +... .....|.|.++..+|+|.|+|.|.|..|..+.++.|.+
T Consensus 247 ~~p~~~~v~W~~~g~~~~~~~-----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 247 NIKKETHIVWYKDEREISVDE-----KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp SCCSSCEEEEEETTEEEEEEC-----CC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred CCCCCCEEEEeeCCEECCCCC-----cEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 99998 999999999886321 2222 22358999999999999999999999999999888765
No 51
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=1.6e-26 Score=222.85 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=174.2
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCC-eEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLP-TILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p-~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
+|.|...|....+.+|+.+.|.|.+.+.|.+ .++|+|+|..+... +..|.|.+++.+|+|.|+|.+.|..+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~~s- 73 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS------TPSYRITSASVNDSGEYRCQRGLSGRS- 73 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC------SSEEEESSCCGGGCEEEEEEESSSCCC-
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc------CCeEEEecCCcccCeEEEEEEecCCcc-
Confidence 5889999999999999999999999988887 89999999988653 468999999999999999999876554
Q ss_pred EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCC-CeeEEeccceeeeEEEeeeEE
Q psy15127 150 SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLES-SKSLDLSRRTLGWLRVRPLYW 228 (633)
Q Consensus 150 s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~ 228 (633)
..+.|.|..+ + +...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+.... ...+.+...... ..|.|+
T Consensus 74 -~~~~l~v~~~-~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~---d~G~Y~ 147 (262)
T 3rjd_A 74 -DPIQLEIHRG-W-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNIS---HNGTYH 147 (262)
T ss_dssp -CCEEEEEECS-S-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGG---GCEEEE
T ss_pred -ccEEEEEecc-c-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChh---hCEEEE
Confidence 4566777654 3 34455566788999999999965788899999999999886432 222222222222 258999
Q ss_pred EEeecCCCCCC---ccccc--------ccceeEEecCCceEEEEEEEeeecC-C----eeEEEECCEEEEeccCCccceE
Q psy15127 229 NVARPRANLNP---RYIGR--------KMASLLIWNHPRVNRLSCFAEGSPL-P----SVFWTQEGSQVLMFPGNAYGHL 292 (633)
Q Consensus 229 C~a~~~~~~~p---~~~~~--------~~~~~~~~~~g~~~~l~C~~~g~p~-~----~v~W~~~g~~~~~~~~~~~~~~ 292 (633)
|.+.|..+... .+... .......+..|+.+.|.|.+.+.|. + .+.|++++..+..
T Consensus 148 C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~--------- 218 (262)
T 3rjd_A 148 CSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG--------- 218 (262)
T ss_dssp EEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE---------
T ss_pred EEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc---------
Confidence 99988764210 00000 0001223567899999999999986 4 3789999987741
Q ss_pred EEccCceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 293 HVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 293 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
......|.|.++..+|+|.|+|.|.|..|..
T Consensus 219 -~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 219 -RNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 2245689999999999999999999999975
No 52
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=4.3e-27 Score=245.12 Aligned_cols=316 Identities=16% Similarity=0.170 Sum_probs=198.7
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCC----CeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPL----PTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENV 130 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~----p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v 130 (633)
.+...|..+.+.+|++++|.|.+.+.+. +.+.|+|++ ..+ ..+++.... ...|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 3566688899999999999999988776 389999963 222 123333322 347999999
Q ss_pred CCCCCeEEEEEEEeCCce-EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEeccC
Q psy15127 131 GPQDEGLYICDVENLVGS-ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFIDLE 206 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~ 206 (633)
+.+|+|.|+|.|.|..+. ....+.|.|... +|.+...+......+|+.+.|.|.+..+.|.+ .|.|+++|..+...
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 162 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 162 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCC
Confidence 999999999999998764 244556666542 25544433333344688999999954447777 99999999988654
Q ss_pred CCeeEEe---c------cceeeeEEE----eeeEEEEeecCCCCCCccc---------ccccceeEEecCCceEEEEEEE
Q psy15127 207 SSKSLDL---S------RRTLGWLRV----RPLYWNVARPRANLNPRYI---------GRKMASLLIWNHPRVNRLSCFA 264 (633)
Q Consensus 207 ~~~~~~~---~------~~~~~~~~~----~g~y~C~a~~~~~~~p~~~---------~~~~~~~~~~~~g~~~~l~C~~ 264 (633)
....... . ...+.+..+ .|.|+|.|.|..+..+... .........+.+|+.++|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 242 (438)
T 1qgc_4 163 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTA 242 (438)
T ss_dssp EEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEE
T ss_pred ceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEE
Confidence 1110000 0 112222222 4899999999876532110 0011233457789999999999
Q ss_pred eeec--CCeeEEEEC--CEEEEecc------------CCccceEEEcc-----CceEEEcCCCCCCCeEEEEEEEeCCc-
Q psy15127 265 EGSP--LPSVFWTQE--GSQVLMFP------------GNAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALSVAG- 322 (633)
Q Consensus 265 ~g~p--~~~v~W~~~--g~~~~~~~------------~~~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g- 322 (633)
.|.| .+.+.|+++ |..+.... .....++.... ...|.|.++..+|+|.|+|.|.|..+
T Consensus 243 ~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 322 (438)
T 1qgc_4 243 SGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGD 322 (438)
T ss_dssp ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSC
T ss_pred cccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCC
Confidence 9998 679999997 54432110 00113333332 23799999999999999999998443
Q ss_pred ----eeEEEEEEEEEecc----------------------------c-CCCc-eEEeCCCccccCC---CC----C----
Q psy15127 323 ----STTVRAFLQVREFC----------------------------V-LPKG-TFTLGQPNLATGN---SD----L---- 357 (633)
Q Consensus 323 ----~~~~~~~l~v~~~~----------------------------~-~p~p-~~~~~~~~~~~g~---p~----~---- 357 (633)
.......+.|.... . .|.| .+.|.......+. +. .
T Consensus 323 ~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~ 402 (438)
T 1qgc_4 323 EGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 402 (438)
T ss_dssp CCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEE
T ss_pred ccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEE
Confidence 11122344443211 1 1333 4444332221110 00 0
Q ss_pred --ceEEecccccCCEEEEEEEEcCCcceeEEEEE
Q psy15127 358 --RRIACDLRETDSGLYTCTASSESGETSWSASL 389 (633)
Q Consensus 358 --~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l 389 (633)
.+.|..+..+| |.|+|.|.|..|.......|
T Consensus 403 ~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 403 SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 24566677778 99999999999976555443
No 53
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.95 E-value=7.7e-27 Score=228.62 Aligned_cols=256 Identities=16% Similarity=0.159 Sum_probs=177.5
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
.+|.+...+..+.+.+|+.++|.|.+.+ .+.|++++...... ........|.|.+++.+|+|.|+|.+.|..+..
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 77 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTL-DPESPGSTLTTRNATFKNTGTYRCTELEDPMAG 77 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEE-CCCSSCCEEEESSCCGGGCEEEEEECCC-----
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEE-eccCCccEEEEeeeccccCEEEEEEEeccCCcc
Confidence 4677878888899999999999999876 49999877543210 011234689999999999999999999988888
Q ss_pred EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEE-CCEEeccCCCeeEEeccceeeeEEE----
Q psy15127 150 SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKK-NGQFIDLESSKSLDLSRRTLGWLRV---- 223 (633)
Q Consensus 150 s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (633)
+..+.|.|..++..+...+....+.+|+.+.|.|.+ .+.+.+ .+.|++ ++..+..... ........+.+..+
T Consensus 78 ~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~d 155 (289)
T 3ejj_X 78 STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLI-TDPALKDSVSLMREGGRQVLRKTV-YFFSPWRGFIIRKAKVLD 155 (289)
T ss_dssp CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEE-SCGGGGGSEEEEEGGGEECCTTCC-EEEETTTEEEESSCCGGG
T ss_pred eeEEEEEEeCCCcceecccceEEEecCCceEeEEEc-cCCCcceEEEEEecCCeecCCCcc-EEECCCCCEEEeeccccc
Confidence 889999999874446667778889999999999995 555555 599987 5555543322 22222333333222
Q ss_pred eeeEEEEeecC-CCC---------------CCcccccccceeEEecCCceEEEEEEEee-ecCCeeEEEECCEEEEeccC
Q psy15127 224 RPLYWNVARPR-ANL---------------NPRYIGRKMASLLIWNHPRVNRLSCFAEG-SPLPSVFWTQEGSQVLMFPG 286 (633)
Q Consensus 224 ~g~y~C~a~~~-~~~---------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~g~~~~~~~~ 286 (633)
.|.|+|.+.+. .+. +|.+.. ......+..|+.+.|.|.+.+ .|.+.+.|++++..+.....
T Consensus 156 ~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~--~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~ 233 (289)
T 3ejj_X 156 SNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKL--EPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLN 233 (289)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEE--ESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEE
T ss_pred CEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEe--cCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCC
Confidence 48999999843 221 111111 112233467999999999998 78899999999987642110
Q ss_pred CccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 287 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 287 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
...........+.|.|.++..+|.|.|+|.|.|..|..+.++.|.+..
T Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 234 SDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp EEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-
T ss_pred cccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEe
Confidence 000011112345899999999999999999999999999999988764
No 54
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=9.5e-28 Score=237.43 Aligned_cols=252 Identities=16% Similarity=0.250 Sum_probs=174.1
Q ss_pred CCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCC------------------CCCeEEc----ccceEEEccCCCCC
Q psy15127 78 PSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMP------------------TGRAKIL----DDRSLQIENVGPQD 134 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~------------------~~~~~~~----~~~~L~i~~v~~~d 134 (633)
++++.+.+|++++|.|.+.+. +.+.|+|+|++.... .++.... .+.+|.|.+++.+|
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 346789999999999998644 445799999654321 1122221 23579999999999
Q ss_pred CeEEEEEEEeC-CceEEEEEEEEEEeeccc-cccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEE
Q psy15127 135 EGLYICDVENL-VGSISLRASLTVHLLRDD-FRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLD 212 (633)
Q Consensus 135 ~G~Y~C~~~n~-~g~~s~~~~l~V~~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 212 (633)
+|.|+|.|.|. .+..+..+.+.+...++. ....+.......|+.+.|.|.+..|.|.+.+.|++++..+.........
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 99999999886 556777778887766222 2334445556678999999986788999999999998776432111000
Q ss_pred ---eccceeeeEE----EeeeEEEEeecCCCCCCccc------------ccccceeEEecCCceEEEEEEEeeecCC-ee
Q psy15127 213 ---LSRRTLGWLR----VRPLYWNVARPRANLNPRYI------------GRKMASLLIWNHPRVNRLSCFAEGSPLP-SV 272 (633)
Q Consensus 213 ---~~~~~~~~~~----~~g~y~C~a~~~~~~~p~~~------------~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v 272 (633)
.....+.+.. ..|.|+|.|.|..+...... ............|+.++|.|.+.|+|+| .+
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v 245 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKS 245 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEE
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEE
Confidence 0001111111 13799999999765432110 0011122345567899999999999998 69
Q ss_pred EEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc
Q psy15127 273 FWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC 336 (633)
Q Consensus 273 ~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 336 (633)
.|+|++..+.. ......+..|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.|
T Consensus 246 ~W~k~~~~~~~-------~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 246 VWSRLDGQWPD-------GLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp ECCBSSSCCCS-------SCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEEECCeECCC-------cEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 99999876531 1122234456788999999999999999999999999999998643
No 55
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=1.2e-26 Score=231.64 Aligned_cols=247 Identities=14% Similarity=0.101 Sum_probs=178.0
Q ss_pred CceEEEcCCeEEEEEEEecc---------CCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCe-EEEEEEEeCCce
Q psy15127 79 SDATVLSGSVVEFVCRVGGD---------PLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEG-LYICDVENLVGS 148 (633)
Q Consensus 79 ~~~~~~~G~~~~L~C~~~~~---------p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~n~~g~ 148 (633)
..+.+.+|+.+.|.|.+.+. |.+.|+|+|++..+...... ..++.|.|.+++.+|+| .|+|.|.|..|.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-VKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-EETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-eecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 56679999999999999874 55789999999877532111 45789999999999999 999999999877
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEEEECCEEeccCCCeeEEeccceeeeEEE----
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV---- 223 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (633)
......+.|...+|.+...+....+.+|+.+.|.|. ..+.| .+.+.|++++..+.......... ...+.+..+
T Consensus 116 ~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~-~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L~I~~v~~~D 193 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCG-ILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLIIHNPELED 193 (329)
T ss_dssp EEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECC-CCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEEEECSCCGGG
T ss_pred eeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEec-cCCCCCCceEEEEECCccCCCCCceEecC-CCEEEEeecChhh
Confidence 544444444444344333333334567999999998 68888 89999999999986443333222 444444333
Q ss_pred eeeEEEEeecC--CCCCC-c------cccc---------ccceeEEecCCceEEEEEEEeeec---CC-eeEEEECCEEE
Q psy15127 224 RPLYWNVARPR--ANLNP-R------YIGR---------KMASLLIWNHPRVNRLSCFAEGSP---LP-SVFWTQEGSQV 281 (633)
Q Consensus 224 ~g~y~C~a~~~--~~~~p-~------~~~~---------~~~~~~~~~~g~~~~l~C~~~g~p---~~-~v~W~~~g~~~ 281 (633)
.|.|+|.|.|. .+... . +... .......+..|+.++|.|.+.|.| ++ .+.|+++|..+
T Consensus 194 ~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 194 SGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp CEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred CEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 48999999986 33110 0 0000 022335677899999999999998 67 88999999874
Q ss_pred EeccCCccceEEEc-------cCceEEEcCCCCCCCe-EEEEEEEeCCceeEEEEEEEE
Q psy15127 282 LMFPGNAYGHLHVT-------QEGTLRIQGVQKEDAG-FFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 282 ~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~v 332 (633)
.... .+.... ..+.|.|.++..+|.| .|+|.|.|..|..+.++.|.|
T Consensus 274 ~~~~----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 274 IGLD----FGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CCBC----SSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eccC----CceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 2111 111111 3458999999999999 999999999999998888776
No 56
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.94 E-value=9.9e-28 Score=240.81 Aligned_cols=263 Identities=17% Similarity=0.227 Sum_probs=193.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEe-------ccCCCeEEEEeCCccC--CCC--CeEEcccceEEEccCCCCCCeE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVG-------GDPLPTILWRRDDGKM--PTG--RAKILDDRSLQIENVGPQDEGL 137 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~-------~~p~p~i~W~~~~~~i--~~~--~~~~~~~~~L~i~~v~~~d~G~ 137 (633)
...|.+...|.+..+.+|+.+.|.|.+. +.|.+.|.|+|++..+ ... ......++.|.|.+++.+|+|.
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 3458899999999999999999999997 8889999999999873 332 2334567899999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEEeecccc-ccCCCceEEecCCcEEEEEeC----CCCCCCCeEEEEECCEEeccCCCeeEE
Q psy15127 138 YICDVENLVGSISLRASLTVHLLRDDF-RAEPKDTRVASGETALLECGP----PKGQPEPTLHWKKNGQFIDLESSKSLD 212 (633)
Q Consensus 138 Y~C~~~n~~g~~s~~~~l~V~~~~p~~-~~~~~~~~~~~g~~~~l~C~~----~~~~p~~~i~W~~~~~~~~~~~~~~~~ 212 (633)
|+|.+.|..|..+..+.|.|..+++.. ........+.+|+.+.|.|.+ ..+.|.+.+.|+++|..+.........
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~ 175 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS 175 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE
T ss_pred EEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE
Confidence 999999999988899999998873221 122334578899999999995 577889999999999988765443332
Q ss_pred ecc-ceeeeEEE----eeeEEEEeecCCCCC--------------------CcccccccceeEEecCCceEEEEEEE---
Q psy15127 213 LSR-RTLGWLRV----RPLYWNVARPRANLN--------------------PRYIGRKMASLLIWNHPRVNRLSCFA--- 264 (633)
Q Consensus 213 ~~~-~~~~~~~~----~g~y~C~a~~~~~~~--------------------p~~~~~~~~~~~~~~~g~~~~l~C~~--- 264 (633)
... ..+.+..+ .|.|+|.+.|..+.. |.+.. ......+..|+.+.|.|.+
T Consensus 176 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~--~~~~~~v~~G~~v~L~C~~~~~ 253 (339)
T 3o4o_C 176 VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIIS--PLKTISASLGSRLTIPCKVFLG 253 (339)
T ss_dssp CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECC--CSCCCCCCCCSCCCCCCCEEES
T ss_pred cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEec--CCceeEeccCCCEEEEEEEECC
Confidence 222 23333322 489999999876521 11111 1223345678999999999
Q ss_pred eeec-CCeeEEEECCEEEEeccC----CccceEEEccCc------eEEEcCCCCCCC-eEEEEEEEeCCceeEEEEEEEE
Q psy15127 265 EGSP-LPSVFWTQEGSQVLMFPG----NAYGHLHVTQEG------TLRIQGVQKEDA-GFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 265 ~g~p-~~~v~W~~~g~~~~~~~~----~~~~~~~~~~~~------~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
.|.| ++.+.|+++|..+..... ....+.....++ .|.|.++..+|. |.|+|.|.|..|..+..+.+.+
T Consensus 254 ~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 254 TGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred CCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 8999 789999999976532111 011222233334 799999999997 9999999999999988777655
Q ss_pred E
Q psy15127 333 R 333 (633)
Q Consensus 333 ~ 333 (633)
.
T Consensus 334 ~ 334 (339)
T 3o4o_C 334 H 334 (339)
T ss_dssp -
T ss_pred h
Confidence 3
No 57
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.9e-26 Score=224.49 Aligned_cols=250 Identities=13% Similarity=0.141 Sum_probs=167.0
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc----cceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD----DRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
|.|......+.+.+|+.++|.|.+.+. ++|+|++..+.. +..... .+.|.|.+++.+|+|.|+|.|.|..|
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ-EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE-EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc-ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 455556667889999999999999864 999999998742 222222 25899999999999999999999887
Q ss_pred e---EEEEEEEEEEeeccccccCCCc---eEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeE
Q psy15127 148 S---ISLRASLTVHLLRDDFRAEPKD---TRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWL 221 (633)
Q Consensus 148 ~---~s~~~~l~V~~~~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (633)
. .+..+.|.|..+...+...... ..+.+|+.+.|.|.+. .|.+.+.|++++........ . .....+...
T Consensus 76 ~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~w~~~~~~~~~~~~--~-~~~~~~~~~ 150 (289)
T 3mjg_X 76 LETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQLVVTLHEKKGDVALPVP--Y-DHQRGFSGI 150 (289)
T ss_dssp ---CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTSCEEEEESSCCSCCCCC--E-ETTTEEEEC
T ss_pred CCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCceEEEEeCCCCCcccee--e-cCCcCeeee
Confidence 6 3445555555331222212212 5688999999999954 67788888886522221110 0 111111123
Q ss_pred EEeeeEEEEeecCCCC--------------CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCC
Q psy15127 222 RVRPLYWNVARPRANL--------------NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGN 287 (633)
Q Consensus 222 ~~~g~y~C~a~~~~~~--------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~ 287 (633)
...|.|+|.|.+..+. +|.+.. ......+..|+.+.|.|.+.|.|.+.+.|++++........
T Consensus 151 ~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~--~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~- 227 (289)
T 3mjg_X 151 FEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSV--NAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVE- 227 (289)
T ss_dssp CCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEE--EESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCC-
T ss_pred ccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEE--eCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccc-
Confidence 3469999999865431 111111 11224467899999999999999999999987753211000
Q ss_pred ccceEEE------ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc
Q psy15127 288 AYGHLHV------TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC 336 (633)
Q Consensus 288 ~~~~~~~------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 336 (633)
..... .....|.|.++..+|+|.|+|.|.|..|....++.|.|...+
T Consensus 228 --~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 228 --PVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp --CEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred --ccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEe
Confidence 01111 123589999999999999999999999999999999998654
No 58
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.94 E-value=2.3e-26 Score=231.84 Aligned_cols=254 Identities=17% Similarity=0.146 Sum_probs=156.2
Q ss_pred CCceEEEcCCeEEEEEEEeccCC-----------CeEEEEeCCcc------CC---CCCeEEcccceEEEccCCCCCCeE
Q psy15127 78 PSDATVLSGSVVEFVCRVGGDPL-----------PTILWRRDDGK------MP---TGRAKILDDRSLQIENVGPQDEGL 137 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~p~-----------p~i~W~~~~~~------i~---~~~~~~~~~~~L~i~~v~~~d~G~ 137 (633)
..++.+.+|+.+.|.|.+.+.|. +.|.|+|++.. +. ...+....++.|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 56788999999999999987654 89999998842 21 123334456799999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEEeeccccc---cCCCceEEecCCcEEEEEeC----CCCCCCCeEEEEECCEEeccCCCee
Q psy15127 138 YICDVENLVGSISLRASLTVHLLRDDFR---AEPKDTRVASGETALLECGP----PKGQPEPTLHWKKNGQFIDLESSKS 210 (633)
Q Consensus 138 Y~C~~~n~~g~~s~~~~l~V~~~~p~~~---~~~~~~~~~~g~~~~l~C~~----~~~~p~~~i~W~~~~~~~~~~~~~~ 210 (633)
|+|.|.|..+.....+.|.|..++..+. ..+....+.+|+.+.|.|.+ ..+.|.+.+.|++++..+... ..
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~--~~ 171 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF--NN 171 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC--SS
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc--cc
Confidence 9999999998888889999988632221 22345577899999999983 266899999999999988543 22
Q ss_pred EEeccceeeeEEE----eeeEEEEeecCC-CCC--------------------CcccccccceeEEecCCceEEEEEEEe
Q psy15127 211 LDLSRRTLGWLRV----RPLYWNVARPRA-NLN--------------------PRYIGRKMASLLIWNHPRVNRLSCFAE 265 (633)
Q Consensus 211 ~~~~~~~~~~~~~----~g~y~C~a~~~~-~~~--------------------p~~~~~~~~~~~~~~~g~~~~l~C~~~ 265 (633)
+......+.+..+ .|.|+|.|.|.. +.. |.+..........+..|+.++|.|.+.
T Consensus 172 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~ 251 (349)
T 4dep_C 172 VIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVY 251 (349)
T ss_dssp EEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEE
T ss_pred eeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEE
Confidence 2222233444333 489999999865 211 111111111112566789999999999
Q ss_pred ----eecCCeeEEEECCEEEEeccC-CccceEE-------EccCceEEEcCCCCCCC-eEEEEEEEeCCceeEEEEEEEE
Q psy15127 266 ----GSPLPSVFWTQEGSQVLMFPG-NAYGHLH-------VTQEGTLRIQGVQKEDA-GFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 266 ----g~p~~~v~W~~~g~~~~~~~~-~~~~~~~-------~~~~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
|.|.+.+.|+++|..+..... ....... ......|.|.++..+|. |.|+|.|.|..|.....+.|.|
T Consensus 252 ~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 331 (349)
T 4dep_C 252 FSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQ 331 (349)
T ss_dssp ECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC---
T ss_pred EccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEee
Confidence 568899999999987753111 0000000 01123599999999999 9999999999999999988888
Q ss_pred E
Q psy15127 333 R 333 (633)
Q Consensus 333 ~ 333 (633)
.
T Consensus 332 ~ 332 (349)
T 4dep_C 332 K 332 (349)
T ss_dssp -
T ss_pred e
Confidence 5
No 59
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=223.85 Aligned_cols=249 Identities=16% Similarity=0.162 Sum_probs=162.3
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCC----------CCCeEE--------cccceEEEccCCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMP----------TGRAKI--------LDDRSLQIENVGP 132 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~----------~~~~~~--------~~~~~L~i~~v~~ 132 (633)
..++..|..+.+.+|+++.|.|.+.+. |.+.|+|+|++.... ..+... .....|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 456777889999999999999999887 888999999986532 113332 2245799999999
Q ss_pred CCCeEEEEEEEeCCce-----EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC--eEEEEECCEEecc
Q psy15127 133 QDEGLYICDVENLVGS-----ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP--TLHWKKNGQFIDL 205 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~-----~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~ 205 (633)
+|+|.|+|.|.|..+. .+..+.|.|..++....+......+.+|+.+.|.|.+ .+.|++ .+.|+++|..+..
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~-~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCES-HGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEE-EEEBSSCCEEEEEETTEECCC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEE-eCccCCCcEEEEEECCEEccc
Confidence 9999999999998653 2245678887763222222234567899999999995 565544 9999999988764
Q ss_pred CCCeeEEe-ccce------eeeE----EEeeeEEEEeecCCCCCCc------c--cccccceeE----EecCCceEEEEE
Q psy15127 206 ESSKSLDL-SRRT------LGWL----RVRPLYWNVARPRANLNPR------Y--IGRKMASLL----IWNHPRVNRLSC 262 (633)
Q Consensus 206 ~~~~~~~~-~~~~------~~~~----~~~g~y~C~a~~~~~~~p~------~--~~~~~~~~~----~~~~g~~~~l~C 262 (633)
........ .... +.+. ...|.|+|.|.|..+.... + .....+... .+.+|+.++|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C 242 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTC 242 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEE
Confidence 33111100 0111 1111 1138999999997654210 0 001111111 145899999999
Q ss_pred EEeeecCC--eeEEEECCEEEEeccCCccceEEEccC------ceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 263 FAEGSPLP--SVFWTQEGSQVLMFPGNAYGHLHVTQE------GTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 263 ~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
.+.|.+++ .+.|+++|..+..... .......+ ..|.|..+..+|.|.|+|.|.|..|..
T Consensus 243 ~~~g~~p~~~~v~W~k~g~~l~~~~~---~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 243 QVRKFYPQRLQLTWLENGNVSRTETA---STVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEBSSCEEEEEEETTEEEEEEEC---CSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEccccCCCcEEEEEECCeEccCccc---CceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 99996554 8999999998753211 11222222 258889999999999999999999875
No 60
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=4.3e-27 Score=245.11 Aligned_cols=285 Identities=14% Similarity=0.195 Sum_probs=183.3
Q ss_pred CceEEee---CceEEEcCCCC--CCeEEEEEEe-------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEec-
Q psy15127 40 RRSRSIF---GSVLGARGALS--DDQWKLIAKE-------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGG- 97 (633)
Q Consensus 40 ~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~-------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~- 97 (633)
.|+.+.. .++|.|.+++. +|.|+|.|.| +. .+|.+...+....+.+|+.+.|.|.+.+
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 143 (438)
T 1qgc_4 64 DRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 143 (438)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred CcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccc
Confidence 4665543 24799999998 9999999988 11 2455444333333346889999999987
Q ss_pred cCCC-eEEEEeCCccCCCCCeE-----------EcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccc
Q psy15127 98 DPLP-TILWRRDDGKMPTGRAK-----------ILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFR 165 (633)
Q Consensus 98 ~p~p-~i~W~~~~~~i~~~~~~-----------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~ 165 (633)
.|.+ .|+|+|+|..+..+... ....+.|.|.+++.+|+|.|+|.|.|..+.......+.+..+ +...
T Consensus 144 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~-~~~~ 222 (438)
T 1qgc_4 144 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC-EVML 222 (438)
T ss_dssp BSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC--CCEE
T ss_pred cCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccc-eeEE
Confidence 6777 89999999887654111 111247999999999999999999998876433333322222 2223
Q ss_pred cCCCceEEecCCcEEEEEeCCCCCC--CCeEEEEEC--CEEecc-----------------CCCeeEEec----cceeee
Q psy15127 166 AEPKDTRVASGETALLECGPPKGQP--EPTLHWKKN--GQFIDL-----------------ESSKSLDLS----RRTLGW 220 (633)
Q Consensus 166 ~~~~~~~~~~g~~~~l~C~~~~~~p--~~~i~W~~~--~~~~~~-----------------~~~~~~~~~----~~~~~~ 220 (633)
..+....+.+|+.+.|.|. ..|.| .+.+.|+|+ +..+.. ..+..+... ...|.+
T Consensus 223 ~~~~~~~v~~G~~v~L~C~-~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 301 (438)
T 1qgc_4 223 VESGGGLVKPGGSLKLSCT-ASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQM 301 (438)
T ss_dssp EEECCEEECTTCCEEEEEE-EESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred ecCCceEEecCCcEEEEEE-EcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEE
Confidence 3455677899999999999 57777 679999996 543321 111111110 112222
Q ss_pred EEE----eeeEEEEeecCCC--------CCCccccc----ccceeE------EecCCceEEEEEEEeee-cCC-eeEEEE
Q psy15127 221 LRV----RPLYWNVARPRAN--------LNPRYIGR----KMASLL------IWNHPRVNRLSCFAEGS-PLP-SVFWTQ 276 (633)
Q Consensus 221 ~~~----~g~y~C~a~~~~~--------~~p~~~~~----~~~~~~------~~~~g~~~~l~C~~~g~-p~~-~v~W~~ 276 (633)
..+ .|.|+|.|.|..+ ....+... ..+... .+..|+.++|.|.+.|. |.+ .+.|++
T Consensus 302 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 381 (438)
T 1qgc_4 302 SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNS 381 (438)
T ss_dssp CSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGG
T ss_pred CCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEec
Confidence 222 4899999998332 11111111 011111 13468999999999997 877 999999
Q ss_pred CCEEEEeccCCccceEEEc----cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy15127 277 EGSQVLMFPGNAYGHLHVT----QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 330 (633)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 330 (633)
+|..+... ........ ..+.|.|.++..+| |.|+|.|.|..|.......+
T Consensus 382 ~g~~~~~~---~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 382 GSLSSGVH---TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp GTCCSSEE---ECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCCCCcee---ecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 99765321 11111111 12368999988888 99999999999987665544
No 61
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.94 E-value=1.7e-25 Score=216.01 Aligned_cols=224 Identities=19% Similarity=0.241 Sum_probs=165.3
Q ss_pred EEEcCCeEEEEEEEec-cCCC--eEEEEeCCccCCCCCeEEcccceEEEccC---CCCCCeE--EEEEEEeCCceEEEEE
Q psy15127 82 TVLSGSVVEFVCRVGG-DPLP--TILWRRDDGKMPTGRAKILDDRSLQIENV---GPQDEGL--YICDVENLVGSISLRA 153 (633)
Q Consensus 82 ~~~~G~~~~L~C~~~~-~p~p--~i~W~~~~~~i~~~~~~~~~~~~L~i~~v---~~~d~G~--Y~C~~~n~~g~~s~~~ 153 (633)
.+.+|+.++|.|.+.+ .|.+ .|+|+|+|..+.. .....+..|.+..+ +.+|+|. |+|.+.|..|..+..+
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~ 91 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ 91 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEE
Confidence 6899999999999998 7777 9999999998865 23334456777666 7788885 9999999999988999
Q ss_pred EEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEE----EeeeEEE
Q psy15127 154 SLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLR----VRPLYWN 229 (633)
Q Consensus 154 ~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~y~C 229 (633)
.|.|...++ ..+.+....+.+|+.+.|.|.+ . |.+.+.| +|..+...... ..+.+.. ..|.|+|
T Consensus 92 ~l~V~~~p~-p~~~~~~~~v~~G~~v~l~C~~-~--p~~~i~W--~g~~~~~~~~~------~~l~i~~~~~~~~g~Y~C 159 (265)
T 2oz4_A 92 TVTIYSFPA-PNVILTKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQPLGPR------AQLLLKATPEDNGRSFSC 159 (265)
T ss_dssp EEEEECCCC-CEEEESCSEEETTCEEEEEEEC-C--TTSEEEE--SSCSSSCCSSE------ECCEEECCGGGTTEEEEE
T ss_pred EEEEeCCCC-ceeecCCceecCCCcEEEEEEc-c--CCCEEEE--CCEEccCCCCc------EEEEEccccccCCceEEE
Confidence 999987522 3333456678899999999995 4 8899999 77766432211 1122111 1357999
Q ss_pred EeecCC-CCC--------------CcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE
Q psy15127 230 VARPRA-NLN--------------PRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV 294 (633)
Q Consensus 230 ~a~~~~-~~~--------------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 294 (633)
.|.|.. +.. |.+..........+.+|+.++|.|.+.|+|.|.+.|+++|..+.
T Consensus 160 ~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~------------ 227 (265)
T 2oz4_A 160 SATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL------------ 227 (265)
T ss_dssp EEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC------------
T ss_pred EEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccC------------
Confidence 998643 321 22222222334567789999999999999999999999997321
Q ss_pred ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 295 TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 295 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
..+.+. .+..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 228 -~~g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 228 -PIGESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp -CTTSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred -CCCcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 223333 3778999999999999999999999998863
No 62
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.94 E-value=1.5e-25 Score=221.84 Aligned_cols=264 Identities=13% Similarity=0.133 Sum_probs=174.3
Q ss_pred EEecCCceEEEEEEEeee-----cCCeeEEEECCEEEEeccCCccceEEEccC--ceEEEcCCCCCCCeEEEEEEEeCCc
Q psy15127 250 LIWNHPRVNRLSCFAEGS-----PLPSVFWTQEGSQVLMFPGNAYGHLHVTQE--GTLRIQGVQKEDAGFFVCSALSVAG 322 (633)
Q Consensus 250 ~~~~~g~~~~l~C~~~g~-----p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~a~n~~g 322 (633)
.++..|++++|.|.+.+. |.+.+.|.++|..+. .... +...... +.|.|.++...|+|.|+|.+.+..+
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~---~~~~-~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQP---GGRQ-QRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCT---TCEE-CCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred cEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECC---ccce-EEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 456789999999999997 578999999998652 1110 1011111 4688999988888888887754332
Q ss_pred eeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceec
Q psy15127 323 STTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHR 402 (633)
Q Consensus 323 ~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~ 402 (633)
.... .+.|.|..+
T Consensus 86 ~~~~-----------------------------------------------------------~~~l~v~~~-------- 98 (313)
T 2d9q_B 86 QILD-----------------------------------------------------------QVELRAGYP-------- 98 (313)
T ss_dssp EEEE-----------------------------------------------------------EEEEEECCC--------
T ss_pred eeEE-----------------------------------------------------------EEEEccCCC--------
Confidence 2111 223333332
Q ss_pred CCCCCCCCCCCCCcEEEEe-eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCC-----CCeEEEEEeeeeceEEEe--
Q psy15127 403 MPDSGLFPGPPAAPVILNT-TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQ-----TGWVVAAHRITSTSITVS-- 474 (633)
Q Consensus 403 ~~~~~~~p~~p~~~~~~~~-~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~-- 474 (633)
|++|..+.+... ...++.++|+++.+. +. ...|.|+|+..+.. ..|...........++|.
T Consensus 99 -------P~~P~~l~c~~~~~~~~~~~~W~~~~~~---~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (313)
T 2d9q_B 99 -------PAIPHNLSCLMNLTTSSLICQWEPGPET---HL-PTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRK 167 (313)
T ss_dssp -------CCCCEEEEEEEETTTTEEEEEEECCSCC---SS-CCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGG
T ss_pred -------CCCCccceeeECCCCccEEEEecCCCCC---CC-ceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECcc
Confidence 344666766666 368999999998853 33 45699999876421 223322111223456664
Q ss_pred cCCCCCeEEEEEEEEeccccCCCCCCCCceeecCC-CCCCCcchHHHHHHHhCCceEEeeeeeec------ccceEEEEE
Q psy15127 475 DLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGL-NSLVPQHLLDEARARLGTKVVNLRELIPT------ASTAVRITW 547 (633)
Q Consensus 475 ~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~si~v~W 547 (633)
+|.+++.|.|+|.|.|..|.+..+ .. .+.+... .|.+|.++ .+... ..+++.|+|
T Consensus 168 ~L~~~~~Y~f~V~A~N~~G~~~s~-~~-~~~~~~~~~p~pP~~~----------------~~~~~~~~~~~~~~~l~l~W 229 (313)
T 2d9q_B 168 HLLLYQNMGIWVQAENALGTSMSP-QL-CLDPMDVVKLEPPMLR----------------TMDPSPEAAPPQAGCLQLSW 229 (313)
T ss_dssp GCCSSSCEEEEEEEEETTEEEECC-CE-EECGGGGEECCCCEEE----------------ECCC-------CCSCEEEEE
T ss_pred ccccceeEEEEEEEECCCCCccCc-cE-EEehhheeccCcCcee----------------EEEEecccccCCCCeEEEEE
Confidence 599999999999999999997432 22 2333332 35444443 45544 468999999
Q ss_pred EEecCCCcccccchhhhhcceeEEEEE-EcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccc
Q psy15127 548 EVSWGSVPQHLLDEARARLGTKVVNLR-ELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKT 626 (633)
Q Consensus 548 ~~p~~~~p~~~~~~~~~i~~y~~i~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~ 626 (633)
++| ...++.+++| .|+|+ ..+.. .|+..+. .....+.++|.+|+|++.|.|+|+|.|..
T Consensus 230 ~~p--------~~~~~~~l~Y-~v~y~~~~~~~-------~w~~~~~----~~~~~~~~~l~~L~p~t~Y~~rVra~~~~ 289 (313)
T 2d9q_B 230 EPW--------QPGLHINQKC-ELRHKPQRGEA-------SWALVGP----LPLEALQYELCGLLPATAYTLQIRCIRWP 289 (313)
T ss_dssp ECC--------GGGTTSCEEE-EEEEEESSSCC-------CCEEEEE----ECSCEEEEEECSCCSCCCEEEEEEEEECS
T ss_pred CCC--------CCCCceeEEE-EEEEccCCCCC-------CcEEccc----ccCcceEEEEeCCCCCCeEEEEEEeeECC
Confidence 954 2234446899 99999 55443 3764421 12356889999999999999999999999
Q ss_pred cccccCC
Q psy15127 627 VEGARLD 633 (633)
Q Consensus 627 g~g~~s~ 633 (633)
|.|++|+
T Consensus 290 g~G~wS~ 296 (313)
T 2d9q_B 290 LPGHWSD 296 (313)
T ss_dssp SCCCCCC
T ss_pred CCCccCC
Confidence 9998764
No 63
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.93 E-value=9e-26 Score=225.69 Aligned_cols=253 Identities=16% Similarity=0.242 Sum_probs=175.1
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEecc----CCCeEEEEeCCcc---------------C---CCCCeEEc----ccce
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGD----PLPTILWRRDDGK---------------M---PTGRAKIL----DDRS 124 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~----p~p~i~W~~~~~~---------------i---~~~~~~~~----~~~~ 124 (633)
++.++..+..+.+.+|++++|.|.+.+. +.+.+.|+|++.. + ..++.... .+.+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3455666778899999999999999775 4557999995421 1 12344433 2468
Q ss_pred EEEccCCCCCCeEEEEE-EEeCCceEEEEEEEEEEeeccccc--cCCCceEEecC---CcEEEEEeCCCCCCCCeEEEEE
Q psy15127 125 LQIENVGPQDEGLYICD-VENLVGSISLRASLTVHLLRDDFR--AEPKDTRVASG---ETALLECGPPKGQPEPTLHWKK 198 (633)
Q Consensus 125 L~i~~v~~~d~G~Y~C~-~~n~~g~~s~~~~l~V~~~~p~~~--~~~~~~~~~~g---~~~~l~C~~~~~~p~~~i~W~~ 198 (633)
|.|.+++.+|+|.|+|. +.+..+..+..+.|.|..+ |.+. ..+....+.+| +.+.|.|.+..+.|.+.+.|++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAK-PTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-CEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecC-CcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 99999999999999998 5566777888899999987 5442 34556678888 7799999756889999999999
Q ss_pred CCEEeccCCCeeEEeccceeee---E-------EEeeeEEEEeecCCCCC-----------CcccccccceeEEecCCce
Q psy15127 199 NGQFIDLESSKSLDLSRRTLGW---L-------RVRPLYWNVARPRANLN-----------PRYIGRKMASLLIWNHPRV 257 (633)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~---~-------~~~g~y~C~a~~~~~~~-----------p~~~~~~~~~~~~~~~g~~ 257 (633)
++...... .........+.+ + ...|.|+|.|.|..+.. |.+.. .......+..|+.
T Consensus 173 ~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~-~~~~~~~~~~g~~ 249 (331)
T 3u83_A 173 RLKGEAEY--QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTI-EGFDGNWYLQRMD 249 (331)
T ss_dssp SSCCEEEE--EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEE-ECCCSCCBTTCCC
T ss_pred CCCCcccc--ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEE-ecCCCceEeCCCe
Confidence 53221100 001111111111 1 12479999999986531 11110 1111123557899
Q ss_pred EEEEEEEeeecCCe-eEEEECCEEEEeccCCccceEEEccCceEEEc-CCCCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 258 NRLSCFAEGSPLPS-VFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQ-GVQKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 258 ~~l~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
+.|.|.+.|+|.+. +.|++++..+.. . ....+++|.|. ++..+|.|.|+|.|.|..|..+..+.|.|...
T Consensus 250 ~~l~C~~~g~p~p~~i~W~~~~~~~~~-------~-~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 321 (331)
T 3u83_A 250 VKLTCKADANPPATEYHWTTLNGSLPK-------G-VEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEA 321 (331)
T ss_dssp EEEEEEEEEESCCCEEEEEETTBSCCT-------T-EEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC-
T ss_pred EEEEEeCcCCCCCCEEEEEECCCcccc-------c-ceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEecc
Confidence 99999999999998 999999986531 1 12245689999 99999999999999999999999999888754
No 64
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.5e-26 Score=225.31 Aligned_cols=258 Identities=16% Similarity=0.134 Sum_probs=174.6
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc---cceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD---DRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...+....+.+|+.++|.|.+.+. +.|++++... ..... .+.|.|.+++.+|+|.|+|.+.|.
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPH----WTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSS----CEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCc----eEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 357899999999999999999999999763 9999765432 12221 358999999999999999999998
Q ss_pred CceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECC-EEeccCCCeeEEeccceeeeE---
Q psy15127 146 VGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNG-QFIDLESSKSLDLSRRTLGWL--- 221 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~--- 221 (633)
.+..+..+.|.|..++..+...+....+.+|+.+.|.|.+....+.+.+.|++++ ..+.... .........+.+.
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~L~i~~~~ 152 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHT-NYSFSPWHGFTIHRAK 152 (292)
T ss_dssp ---CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSC-CEECCSSSCCEETTCC
T ss_pred CCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCC-cccccCCceEEECCCC
Confidence 8888888999999874445667778889999999999995432222789999974 4333222 2211122223222
Q ss_pred -EEeeeEEEEeecCCCCCCc--c--ccc----------ccceeEEecCCceEEEEEEEeeecC-CeeEEEECCEEEEecc
Q psy15127 222 -RVRPLYWNVARPRANLNPR--Y--IGR----------KMASLLIWNHPRVNRLSCFAEGSPL-PSVFWTQEGSQVLMFP 285 (633)
Q Consensus 222 -~~~g~y~C~a~~~~~~~p~--~--~~~----------~~~~~~~~~~g~~~~l~C~~~g~p~-~~v~W~~~g~~~~~~~ 285 (633)
...|.|+|.+.|..+.... + ... .......+..|+.+.|.|.+.+.|+ +.+.|++++..+....
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~ 232 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQ 232 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCB
T ss_pred HHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCc
Confidence 2258999999976552110 0 000 0111122357899999999998776 4788999887553211
Q ss_pred CCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 286 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 286 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
............+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|...
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 233 QSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp EEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred cceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 10000001123358999999999999999999999999999999988754
No 65
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.92 E-value=2.6e-26 Score=248.58 Aligned_cols=483 Identities=12% Similarity=0.106 Sum_probs=269.8
Q ss_pred eCCCceEEEcCCeEEEEEEEe-------ccCCCeEEEEeCCccCCCCCeEEcc--cceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 76 SEPSDATVLSGSVVEFVCRVG-------GDPLPTILWRRDDGKMPTGRAKILD--DRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~-------~~p~p~i~W~~~~~~i~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
..|.+..+..|++++|.|.+. +.+.+.|.|+++|..++........ ...|+|.++...|++ |+|.+....
T Consensus 8 i~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~ 86 (589)
T 3l5h_A 8 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQ-LTCNILTFG 86 (589)
T ss_dssp CSCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCTT
T ss_pred EecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHccccCCcEeEEEEecCCCccee-eEEecccCC
Confidence 457778899999999999997 5667889999999888654333222 357999999998865 889886311
Q ss_pred --ceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEE-------eccCC----CeeEEe
Q psy15127 147 --GSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQF-------IDLES----SKSLDL 213 (633)
Q Consensus 147 --g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~-------~~~~~----~~~~~~ 213 (633)
......+.|.|..+ | +....|.|. ..+.....+.|...... +.... ......
T Consensus 87 ~~~~~~~~~~l~v~~p-P-------------~~P~nl~c~-~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~ 151 (589)
T 3l5h_A 87 QLEQNVYGITIISGLP-P-------------EKPKNLSCI-VNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA 151 (589)
T ss_dssp CC-CCCCCCCCCC-CC-C-------------CCCEEEEEE-EETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEEC
T ss_pred CcccEEEeEEEeccCC-C-------------CCCEeeEEE-ECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCCC
Confidence 11222333444333 2 333456666 33344456666543210 00000 000000
Q ss_pred c-----cceee-eEEE--eeeEEEEeecCCCCCCcccc-cccceeEEecCCceEEEEEEEeeecCCeeEEEECCE-----
Q psy15127 214 S-----RRTLG-WLRV--RPLYWNVARPRANLNPRYIG-RKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGS----- 279 (633)
Q Consensus 214 ~-----~~~~~-~~~~--~g~y~C~a~~~~~~~p~~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~----- 279 (633)
. ...+. .+.. .-.|++.|.|..+....... ..........++..+.+.+.........+.|.....
T Consensus 152 ~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~ 231 (589)
T 3l5h_A 152 KRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVII 231 (589)
T ss_dssp BTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSC
T ss_pred CCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeee
Confidence 0 00000 0000 11356788887775311100 000001111122222222111111112333332110
Q ss_pred ---EEEec--cCCccceEE----EccCceEEEcCCCCCCCeEEEEEEEeCCceeEE---EEEEEEEecccCC---C----
Q psy15127 280 ---QVLMF--PGNAYGHLH----VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV---RAFLQVREFCVLP---K---- 340 (633)
Q Consensus 280 ---~~~~~--~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~v~~~~~~p---~---- 340 (633)
.+... ......... ......+.+.++.......++..|.|..|.... +..+.+...+..| +
T Consensus 232 ~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~ 311 (589)
T 3l5h_A 232 LKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWY 311 (589)
T ss_dssp EEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEE
T ss_pred EEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEE
Confidence 00000 000000000 012246889999888888889999988764311 2222222111111 1
Q ss_pred ------------ceEEeCCCccc-cCCCCCce-------------------EEecccccCCEEEEEEEEcCCcceeEEEE
Q psy15127 341 ------------GTFTLGQPNLA-TGNSDLRR-------------------IACDLRETDSGLYTCTASSESGETSWSAS 388 (633)
Q Consensus 341 ------------p~~~~~~~~~~-~g~p~~~~-------------------~i~~~~~~d~g~y~c~a~n~~g~~~~~~~ 388 (633)
-.+.|.+.... .+.++..| .+..+.....|.+++.|.|..|....+.
T Consensus 312 ~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~~~V~A~n~~G~~~~s~- 390 (589)
T 3l5h_A 312 KIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAV- 390 (589)
T ss_dssp ECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCCCBCCCSSSCCEECCCSSCCCEEEEEEBTTBCCCCCC-
T ss_pred EeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCceeeccCCceEEEEeCCCCEEEEEEEEeCCccCCCeE-
Confidence 12334321110 01111111 2223556778889999999988653321
Q ss_pred EEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCC----eEEEEE
Q psy15127 389 LSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTG----WVVAAH 464 (633)
Q Consensus 389 l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~----~~~~~~ 464 (633)
+.+.. .....+.++..+..... .+++.|+|.++. ..+.+|.|+|+..+.... |... .
T Consensus 391 ~~~~~-----------~~~~~~~p~~~l~~~~~-~~si~l~W~~p~------~~i~~Y~v~~~~~~~~~~~~~~~~~~-~ 451 (589)
T 3l5h_A 391 LTIPA-----------CDFQATHPVMDLKAFPK-DNMLWVEWTTPR------ESVKKYILEWCVLSDKAPCITDWQQE-D 451 (589)
T ss_dssp CCCCC-----------TTCCCCSCCCSCEEEEC-SSSEEEECCCCS------SCCSCBCCEEEEECSSSCCCEEECCB-C
T ss_pred EEeec-----------ccccCCCCcceEEEEEC-CCeEEEEEECCC------CCccEEEEEEEECCCCCCCccCcEEe-e
Confidence 11111 11112344455655544 689999999987 268889999998764321 3211 1
Q ss_pred eeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEE
Q psy15127 465 RITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVR 544 (633)
Q Consensus 465 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~ 544 (633)
......+.+.+|.|++.|.|+|+|.|..|.|.++.. .+.|.+.+|..++.+ .+..++.+++.
T Consensus 452 ~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~--~~~t~~~~P~~pp~l----------------~~~~~~~~sv~ 513 (589)
T 3l5h_A 452 GTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI--KAYLKQAPPSKGPTV----------------RTKKVGKNEAV 513 (589)
T ss_dssp SSCCEEECCSCCCSSSEEEEEECBEETTEECCCEEE--EEESSCCCCSSCCCC----------------CEECCCSSCBE
T ss_pred CCcceEEehhccccCcEEEEEEEEEeCCcccCCEEE--EEEeccCCCCCCCeE----------------EEeecccceEE
Confidence 112345667999999999999999999999987533 366777788887776 78888999999
Q ss_pred EEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccc
Q psy15127 545 ITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFF 624 (633)
Q Consensus 545 v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n 624 (633)
|+|++| +....+|.|++| .|+|+..+... | .+...+..++++|.+|+|++.|.|+|+|.|
T Consensus 514 l~W~~~------~~~~~~g~i~~Y-~v~~~~~~~~~-------~------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n 573 (589)
T 3l5h_A 514 LEWDQL------PVDVQNGFIRNY-TIFYRTIIGNE-------T------AVNVDSSHTEYTLSSLTSDTLYMVRMAAYT 573 (589)
T ss_dssp EBCCCC------CHHHHCSCEEEE-EECCBCSSCCC-------C------CEEECTTCCBCCBCSCCSSCCEECCEEEEE
T ss_pred EEecCC------CHHHcCccceeE-EEEEEeCCCCe-------E------EEEeCCcccEEEecCCCCCCEEEEEEEEEe
Confidence 999942 224678999999 99998766543 2 223456789999999999999999999999
Q ss_pred cccccccCC
Q psy15127 625 KTVEGARLD 633 (633)
Q Consensus 625 ~~g~g~~s~ 633 (633)
.+| |++|+
T Consensus 574 ~~G-~~~S~ 581 (589)
T 3l5h_A 574 DEG-GKDGP 581 (589)
T ss_dssp TTE-EEECC
T ss_pred CCC-CCCCC
Confidence 999 88774
No 66
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=2.8e-23 Score=202.63 Aligned_cols=215 Identities=20% Similarity=0.265 Sum_probs=165.3
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEe---eCceEEEcCCCC--CCeEEEEEEe------------cCcCCeeee
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSI---FGSVLGARGALS--DDQWKLIAKE------------ALIKPFPIS 76 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~ 76 (633)
+.|.+.|+| ..+|.+...+.++++. .++.|.|.+++. +|.|+|.|.| +..+|.+..
T Consensus 31 g~p~~~v~W-------~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~ 103 (284)
T 2rik_A 31 GTAPIKITW-------AKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIK 103 (284)
T ss_dssp SSSCCEEEE-------EETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEE
T ss_pred cCCCCEEEE-------EECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccc
Confidence 345556663 3344444444454443 236799999998 9999999988 556777665
Q ss_pred CCC-ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE----cccceEEEccCCCCCCeEEEEEEEeCCceEEE
Q psy15127 77 EPS-DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI----LDDRSLQIENVGPQDEGLYICDVENLVGSISL 151 (633)
Q Consensus 77 ~~~-~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~ 151 (633)
.+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....... .....|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 104 ~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 183 (284)
T 2rik_A 104 KLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183 (284)
T ss_dssp CCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeE
Confidence 544 4568999999999999999999999999999886543221 12467999999999999999999999999999
Q ss_pred EEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc--ceeeeEEE----ee
Q psy15127 152 RASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR--RTLGWLRV----RP 225 (633)
Q Consensus 152 ~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~g 225 (633)
.+.|.|..+ |.+...+....+.+|+.+.|.|. ..|.|.+.+.|++++..+.......+.... ..+.+..+ .|
T Consensus 184 ~~~l~V~~~-p~~~~~~~~~~~~~g~~v~l~C~-~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 261 (284)
T 2rik_A 184 STSLKVKEP-PVFRKKPHPVETLKGADVHLECE-LQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIG 261 (284)
T ss_dssp EEEEEEECC-CBCCSCCCCEEECTTCCEEEEEE-CBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEEEEecC-CcceeCCCcceecCCCeEEEEEE-EEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCE
Confidence 999999988 88888888888999999999999 688999999999999998766543332222 12222222 48
Q ss_pred eEEEEeecCCCC
Q psy15127 226 LYWNVARPRANL 237 (633)
Q Consensus 226 ~y~C~a~~~~~~ 237 (633)
.|+|.|.|..+.
T Consensus 262 ~Y~C~a~N~~G~ 273 (284)
T 2rik_A 262 EYQCKASNDVGS 273 (284)
T ss_dssp EEEEEEEETTEE
T ss_pred EEEEEEEeCCCc
Confidence 999999998774
No 67
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.92 E-value=2.3e-24 Score=213.81 Aligned_cols=254 Identities=17% Similarity=0.128 Sum_probs=161.1
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC-
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV- 146 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~- 146 (633)
+..+|.|...|. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+..........+.|.|.+++.+|+|.|+|.|.+..
T Consensus 21 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 98 (316)
T 3vh8_G 21 GQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHS 98 (316)
T ss_dssp ---CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSS
T ss_pred CCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCC
Confidence 567899988887 568899999999999877 67899999998765422222245789999999999999999998632
Q ss_pred ----ceEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEE---eccce
Q psy15127 147 ----GSISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLD---LSRRT 217 (633)
Q Consensus 147 ----g~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~---~~~~~ 217 (633)
+..+..+.|.|... +|.+...+... +.+|+.++|.|.+ ..+.+.+.|++++..+......... .....
T Consensus 99 ~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~--~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3vh8_G 99 PTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWS--DIMFEHFFLHKEGISKDPSRLVGQIHDGVSKAN 175 (316)
T ss_dssp SSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEE--SSCCSEEEEEETTCCSCCEEEECEEETTEEEEE
T ss_pred CcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcC--CCCCcEEEEEECCCccccceeeeeecCCCceEE
Confidence 22456677777654 24444444443 8899999999994 3456799999998766422111110 01122
Q ss_pred eeeEE----EeeeEEEEeecCCCC------CCccc--cc---cccee-----EEecCCceEEEEEEEeeecCCeeEEEEC
Q psy15127 218 LGWLR----VRPLYWNVARPRANL------NPRYI--GR---KMASL-----LIWNHPRVNRLSCFAEGSPLPSVFWTQE 277 (633)
Q Consensus 218 ~~~~~----~~g~y~C~a~~~~~~------~p~~~--~~---~~~~~-----~~~~~g~~~~l~C~~~g~p~~~v~W~~~ 277 (633)
+.+.. ..|.|+|.|.|..+. ...+. .. ..... ..+.+|+.++|.|.+. .|.+.+.|+++
T Consensus 176 L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~-~~~~~~~W~k~ 254 (316)
T 3vh8_G 176 FSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR-SSYDMYHLSRE 254 (316)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEES-SCCSEEEEEET
T ss_pred EEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECC-CCCcEEEEEEC
Confidence 22221 248999999988653 11111 00 00111 1346789999999997 47789999999
Q ss_pred CEEEEeccCCccceEEEc---cCceEEEcCCCCCCCeEEEEEEEeCCce-----eEEEEEEEEE
Q psy15127 278 GSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGS-----TTVRAFLQVR 333 (633)
Q Consensus 278 g~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~ 333 (633)
|..+.... ...... ....|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.
T Consensus 255 g~~~~~~~----~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 312 (316)
T 3vh8_G 255 GGAHERRL----PAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVT 312 (316)
T ss_dssp TSSCCEEE----ECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC---
T ss_pred CCcCCCce----eceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEe
Confidence 97543110 000011 12479999999 999999999997663 2444455554
No 68
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=9.6e-25 Score=227.54 Aligned_cols=248 Identities=15% Similarity=0.128 Sum_probs=158.2
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i 127 (633)
+.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... +.+|.|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (444)
T 1igt_B 4 LQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQM 83 (444)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEE
Confidence 3456678899999999999998764 5689999853 221 123444432 358999
Q ss_pred ccCCCCCCeEEEEEEEeCCce---EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECC
Q psy15127 128 ENVGPQDEGLYICDVENLVGS---ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNG 200 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~---~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~ 200 (633)
.+++.+|+|.|+|.+.+..+. ....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+.|++++
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 163 (444)
T 1igt_B 84 SRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 163 (444)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCC
Confidence 999999999999999987543 223457777631 13333222222357899999999954445776 99999988
Q ss_pred EEeccCCCeeEEec-----cceeeeEEE---eeeEEEEeecCCCCCCc---cc------------------cccccee--
Q psy15127 201 QFIDLESSKSLDLS-----RRTLGWLRV---RPLYWNVARPRANLNPR---YI------------------GRKMASL-- 249 (633)
Q Consensus 201 ~~~~~~~~~~~~~~-----~~~~~~~~~---~g~y~C~a~~~~~~~p~---~~------------------~~~~~~~-- 249 (633)
..+........... ...+.+... .|.|+|.|.|..+.... +. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~ 243 (444)
T 1igt_B 164 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFI 243 (444)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEE
T ss_pred CCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEe
Confidence 75321100000000 011111111 18999999998764210 00 0000111
Q ss_pred -----EE-ecCCceEEEEEEEeeec---C-CeeEEEECCEEEEeccCCccceEEE-----ccCceEEEcCCCCCCCeEEE
Q psy15127 250 -----LI-WNHPRVNRLSCFAEGSP---L-PSVFWTQEGSQVLMFPGNAYGHLHV-----TQEGTLRIQGVQKEDAGFFV 314 (633)
Q Consensus 250 -----~~-~~~g~~~~l~C~~~g~p---~-~~v~W~~~g~~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~G~Y~ 314 (633)
.. +..|++++|.|.+.|.+ + +.+.|+++|..+..... ...... ...+.|.|.++..+|+|.|+
T Consensus 244 ~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~--~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 321 (444)
T 1igt_B 244 FPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQT--QTHREDYNSTLRVVSALPIQHQDWMSGKEFK 321 (444)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTC--BCCEEECSSSEEEEEEEECCHHHHHTTCEEE
T ss_pred cCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCccc--ccceeCCCCcEEEEEEEEEcHHHhccCCcEE
Confidence 11 36789999999999984 3 59999999987642111 001111 12347999999999999999
Q ss_pred EEEEeCCcee
Q psy15127 315 CSALSVAGST 324 (633)
Q Consensus 315 C~a~n~~g~~ 324 (633)
|.|.|..|..
T Consensus 322 C~a~n~~~~~ 331 (444)
T 1igt_B 322 CKVNNKDLPA 331 (444)
T ss_dssp EEEECTTCSS
T ss_pred EEEEcCCCCC
Confidence 9999998866
No 69
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.91 E-value=3.4e-24 Score=224.24 Aligned_cols=277 Identities=14% Similarity=0.170 Sum_probs=173.3
Q ss_pred CceEEeeC-----ceEEEcCCCC--CCeEEEEEEecC------------------------c----CCeeeeCCCceEEE
Q psy15127 40 RRSRSIFG-----SVLGARGALS--DDQWKLIAKEAL------------------------I----KPFPISEPSDATVL 84 (633)
Q Consensus 40 ~~~~~~~~-----~~L~i~~v~~--~G~Y~C~a~~v~------------------------~----~p~~~~~~~~~~~~ 84 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+.. . +|.+...+....+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~ 145 (457)
T 1hzh_H 66 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKST 145 (457)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCC
T ss_pred CceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCcccccc
Confidence 46666432 4799999998 999999996521 1 34443333333467
Q ss_pred cCCeEEEEEEEecc-CC-CeEEEEeCCccCCCCC--eEEcc------cceEEEccCCCCCCeEEEEEEEeCCceEEEEEE
Q psy15127 85 SGSVVEFVCRVGGD-PL-PTILWRRDDGKMPTGR--AKILD------DRSLQIENVGPQDEGLYICDVENLVGSISLRAS 154 (633)
Q Consensus 85 ~G~~~~L~C~~~~~-p~-p~i~W~~~~~~i~~~~--~~~~~------~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~ 154 (633)
+|+.++|.|.+.+. |. +.|+|+|++..+.... ..... ...|.|.+++.+| |.|+|.|.|..+.......
T Consensus 146 ~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~ 224 (457)
T 1hzh_H 146 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 224 (457)
T ss_dssp TTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEE
Confidence 89999999999886 64 7899999997653111 11111 2379999999999 9999999998776555554
Q ss_pred EEEEee----------------cccc-ccCCCceE-EecCCcEEEEEeCCCCCCC----CeEEEEECCEEeccCCCe-eE
Q psy15127 155 LTVHLL----------------RDDF-RAEPKDTR-VASGETALLECGPPKGQPE----PTLHWKKNGQFIDLESSK-SL 211 (633)
Q Consensus 155 l~V~~~----------------~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~~p~----~~i~W~~~~~~~~~~~~~-~~ 211 (633)
|.+... +|.+ ...|.... +.+|+++.|.|.+ .|.|+ ..|.|++++..+...... ..
T Consensus 225 v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~-~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~ 303 (457)
T 1hzh_H 225 AEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPEVKFNWYVDGVEVHNAKTKPRE 303 (457)
T ss_dssp CCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEE-ECCCTTCCCCEEEEEETTEEECCCEEEEEE
T ss_pred ecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEE-EcccCCCCceEEEEEeCCccccccccccce
Confidence 443321 1332 22333222 5679999999995 56543 299999999887533211 11
Q ss_pred EeccceeeeEEE----------eeeEEEEeecCCCCCCcc-cc------cccceeEE-------ecCCceEEEEEEEeee
Q psy15127 212 DLSRRTLGWLRV----------RPLYWNVARPRANLNPRY-IG------RKMASLLI-------WNHPRVNRLSCFAEGS 267 (633)
Q Consensus 212 ~~~~~~~~~~~~----------~g~y~C~a~~~~~~~p~~-~~------~~~~~~~~-------~~~g~~~~l~C~~~g~ 267 (633)
...++.+.+... .|.|+|.|.|.....+.. .. ...+...+ +..|+ ++|.|.+.|.
T Consensus 304 ~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~ 382 (457)
T 1hzh_H 304 EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGF 382 (457)
T ss_dssp ECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEE
T ss_pred ecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeE
Confidence 222233322211 589999999765432211 00 01111111 12344 9999999997
Q ss_pred cCC--eeEEEECCEEEEeccCCccceEEEccCc------eEEEcCCCCCCCeEEEEEEEeCCc
Q psy15127 268 PLP--SVFWTQEGSQVLMFPGNAYGHLHVTQEG------TLRIQGVQKEDAGFFVCSALSVAG 322 (633)
Q Consensus 268 p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~d~G~Y~C~a~n~~g 322 (633)
+++ .+.|+++|..+.... ........++ .|.|.....+|.|.|+|.|.|...
T Consensus 383 ~p~~~~v~W~k~g~~l~~~~---~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 383 YPSDIAVEWESNGQPENNYK---TTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp BSSCCEEEEEETTEECCCEE---ECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ECCCCEEEEEECCEECccee---ecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 654 899999998774211 1111222333 355655555789999999999753
No 70
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=5.5e-24 Score=221.79 Aligned_cols=277 Identities=14% Similarity=0.136 Sum_probs=174.1
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEe---------------cC----cCCeeeeCCCceEEEcCCeEEEEE
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKE---------------AL----IKPFPISEPSDATVLSGSVVEFVC 93 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~---------------v~----~~p~~~~~~~~~~~~~G~~~~L~C 93 (633)
.|+.+.. +++|.|.+++. +|.|+|.|.+ +. .+|.+...+....+.+|+.++|.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 145 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGC 145 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEE
Confidence 4666653 35899999998 9999999987 11 134443322233357899999999
Q ss_pred EEecc-CCC-eEEEEeCCccCCC---CC----eEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE------
Q psy15127 94 RVGGD-PLP-TILWRRDDGKMPT---GR----AKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVH------ 158 (633)
Q Consensus 94 ~~~~~-p~p-~i~W~~~~~~i~~---~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~------ 158 (633)
.+.|. |.| .|+|+|++..+.. .. ......+.|.|.+++.+| |.|+|.|.|..+.......+.+.
T Consensus 146 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~ 224 (444)
T 1igt_B 146 LVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 224 (444)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCC
T ss_pred EEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCccc
Confidence 99875 776 9999999876421 00 111123579999999999 99999999998875544444331
Q ss_pred ---------e--ecccc-ccCCCceE-EecCCcEEEEEeCCCCC---C-CCeEEEEECCEEeccCCCee-EEecc-----
Q psy15127 159 ---------L--LRDDF-RAEPKDTR-VASGETALLECGPPKGQ---P-EPTLHWKKNGQFIDLESSKS-LDLSR----- 215 (633)
Q Consensus 159 ---------~--~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~~---p-~~~i~W~~~~~~~~~~~~~~-~~~~~----- 215 (633)
. .+|.+ ..+|.... +.+|+++.|.|.+ .|. | .+.|.|++++..+....... ....+
T Consensus 225 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~-~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~ 303 (444)
T 1igt_B 225 CPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVV-VDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRV 303 (444)
T ss_dssp CCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEE-EEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEE
T ss_pred CCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEE-eecccCCCCeEEEEEECCccccCcccccceeCCCCcEEE
Confidence 0 02443 33333333 5789999999995 465 3 46999999998875432221 11111
Q ss_pred -ceeeeEE----EeeeEEEEeecCCCCCCcc-cc------cccceeEEec------CCceEEEEEEEeee-cCC-eeEEE
Q psy15127 216 -RTLGWLR----VRPLYWNVARPRANLNPRY-IG------RKMASLLIWN------HPRVNRLSCFAEGS-PLP-SVFWT 275 (633)
Q Consensus 216 -~~~~~~~----~~g~y~C~a~~~~~~~p~~-~~------~~~~~~~~~~------~g~~~~l~C~~~g~-p~~-~v~W~ 275 (633)
..|.+.. ..|.|+|.|.|..+..+.. .. ...+...+.. .+..++|.|.+.|. |++ .+.|+
T Consensus 304 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 383 (444)
T 1igt_B 304 VSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWT 383 (444)
T ss_dssp EEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEE
Confidence 1222211 1379999999987754211 00 0111111111 23459999999995 555 89999
Q ss_pred ECCEEEEeccCCccceEEEccCc------eEEEcCCCCCCCeEEEEEEEeCC
Q psy15127 276 QEGSQVLMFPGNAYGHLHVTQEG------TLRIQGVQKEDAGFFVCSALSVA 321 (633)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~d~G~Y~C~a~n~~ 321 (633)
++|..+... .........++ .|.|.....+|.|.|+|.|.|..
T Consensus 384 k~g~~l~~~---~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 384 NNGKTELNY---KNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp ETTEECSSE---EECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred ECCEEcccc---ccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 999876311 11111122333 35666666677999999999975
No 71
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.91 E-value=7.6e-23 Score=190.11 Aligned_cols=188 Identities=30% Similarity=0.519 Sum_probs=139.9
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEc-----ccceEEEccC-CCCCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKIL-----DDRSLQIENV-GPQDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~-----~~~~L~i~~v-~~~d~G~Y~C~~ 142 (633)
..+|.|...|.+..+.+|+.+.|.|.+.|.|.+.|.|+|++..+..++.... ....|.|.++ +.+|+|.|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 4678999999999999999999999999999999999999999877654443 2356999999 599999999999
Q ss_pred EeCCceEEEEEEEEEEeec------cccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccc
Q psy15127 143 ENLVGSISLRASLTVHLLR------DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRR 216 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~~------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 216 (633)
.|..|..+..+.|.|.... |.+...+....+.+|+.+.|.|. ..|.|.+.+.|+++|..+......
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~-~~g~p~p~v~W~~~g~~l~~~~~~------- 155 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCA-ASGNPDPEITWFKDFLPVDTSNNN------- 155 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEE-EECSSCCEEEEEETTEEC-------------
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEE-ecCCCCCeEEEEECCccccCcCCC-------
Confidence 9999998888999998642 33444555566667777777777 456666677777766654321100
Q ss_pred eeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEcc
Q psy15127 217 TLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ 296 (633)
Q Consensus 217 ~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 296 (633)
..........
T Consensus 156 ----------------------------------------------------------------------~~~~~~~~~~ 165 (212)
T 2yd6_A 156 ----------------------------------------------------------------------GRIKQLRSES 165 (212)
T ss_dssp ----------------------------------------------------------------------CCEEEEEETT
T ss_pred ----------------------------------------------------------------------ceEEEEecCC
Confidence 0000011112
Q ss_pred CceEEEcCCCCCCCeEEEEEEEeCCceeE-EEEEEEEEe
Q psy15127 297 EGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVRE 334 (633)
Q Consensus 297 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 334 (633)
.+.|.|.++..+|.|.|+|.|.|..|... ..+.|.|..
T Consensus 166 ~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 166 IGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEe
Confidence 35899999999999999999999999874 446666653
No 72
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.91 E-value=3.8e-24 Score=223.82 Aligned_cols=247 Identities=15% Similarity=0.173 Sum_probs=153.2
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeC--CccC------------------CCCCeEEcc-----cceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRD--DGKM------------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~--~~~i------------------~~~~~~~~~-----~~~L~i 127 (633)
+.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +... ..+++.... ...|.|
T Consensus 4 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (457)
T 1hzh_H 4 LVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMEL 83 (457)
T ss_dssp EEECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEE
Confidence 3456678899999999999998775 678999984 2211 023444432 247999
Q ss_pred ccCCCCCCeEEEEEEEeCCc------------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC-
Q psy15127 128 ENVGPQDEGLYICDVENLVG------------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE- 191 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g------------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~- 191 (633)
.+++.+|+|.|+|.+.|..| .....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 163 (457)
T 1hzh_H 84 RSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 163 (457)
T ss_dssp CSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCC
T ss_pred CCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCC
Confidence 99999999999999998764 2234556777652 2444333333446789999999996544475
Q ss_pred CeEEEEECCEEeccCCCeeEEeccc------eeeeEEEe---eeEEEEeecCCCCCCc---cc-----------------
Q psy15127 192 PTLHWKKNGQFIDLESSKSLDLSRR------TLGWLRVR---PLYWNVARPRANLNPR---YI----------------- 242 (633)
Q Consensus 192 ~~i~W~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---g~y~C~a~~~~~~~p~---~~----------------- 242 (633)
+.|.|++++..+............. .+.+.... |.|+|.|.|..+.... +.
T Consensus 164 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 243 (457)
T 1hzh_H 164 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPE 243 (457)
T ss_dssp CEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCC
T ss_pred eEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCcc
Confidence 7999999985432110001111111 12221111 8999999987653110 00
Q ss_pred cccccee-E-------EecCCceEEEEEEEeeecCC----eeEEEECCEEEEeccCCccceEEEccCceEEEcC---CCC
Q psy15127 243 GRKMASL-L-------IWNHPRVNRLSCFAEGSPLP----SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQG---VQK 307 (633)
Q Consensus 243 ~~~~~~~-~-------~~~~g~~~~l~C~~~g~p~~----~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~---~~~ 307 (633)
....... + .+..|+.++|.|.+.|.|++ .+.|++++..+... .........++.|.+.. +..
T Consensus 244 ~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~---~~~~~~~~~~g~~~~~~~l~i~~ 320 (457)
T 1hzh_H 244 LLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA---KTKPREEQYNSTYRVVSVLTVLH 320 (457)
T ss_dssp CSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCC---EEEEEEECTTSCEEEEEEECCCH
T ss_pred ccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccc---ccccceecCCCcEEEEEEEEECH
Confidence 0000111 1 13468999999999998653 99999999876411 11111223344554442 335
Q ss_pred CC---CeEEEEEEEeCCcee
Q psy15127 308 ED---AGFFVCSALSVAGST 324 (633)
Q Consensus 308 ~d---~G~Y~C~a~n~~g~~ 324 (633)
.| +|.|+|.|.|..+..
T Consensus 321 ~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 321 QDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HHHHHTCCEEEEEECTTSSS
T ss_pred HHccCCCcEEEEEeCCCCCC
Confidence 55 999999999876544
No 73
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.91 E-value=5e-23 Score=204.53 Aligned_cols=261 Identities=13% Similarity=0.124 Sum_probs=172.3
Q ss_pred eEEecCCceEEEEEEEeeec-CCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEE
Q psy15127 249 LLIWNHPRVNRLSCFAEGSP-LPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 327 (633)
Q Consensus 249 ~~~~~~g~~~~l~C~~~g~p-~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 327 (633)
.+....|++++|.|.+.+.+ .+.|.|++++..+.. ...+. ...++.|.|.++...|+|.|+|.+ .|.....
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~----~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~ 86 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGS----HPSRW-AGMGRRLLLRSVQLHDSGNYSCYR---AGRPAGT 86 (325)
T ss_dssp EEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSC----CCEEE-EEESSEEEECSCCGGGCEEEEEES---SSSCSCE
T ss_pred cEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCc----ccccc-ccccceEEecccchhhCeEeEEEe---CCEEeee
Confidence 34456899999999998765 679999998764310 11111 223467778777777777777762 3433333
Q ss_pred EEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCC
Q psy15127 328 AFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSG 407 (633)
Q Consensus 328 ~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~ 407 (633)
+.|.|..+|.
T Consensus 87 -----------------------------------------------------------~~L~V~~pP~----------- 96 (325)
T 1n26_A 87 -----------------------------------------------------------VHLLVDVPPE----------- 96 (325)
T ss_dssp -----------------------------------------------------------EEEEECCCCC-----------
T ss_pred -----------------------------------------------------------EEEEeccCCC-----------
Confidence 4444444332
Q ss_pred CCCCCCCCcEEEE-eeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEec-C-CCCeEEEEEe---eeeceEEEecCC-CCC
Q psy15127 408 LFPGPPAAPVILN-TTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSD-L-QTGWVVAAHR---ITSTSITVSDLK-PDT 480 (633)
Q Consensus 408 ~~p~~p~~~~~~~-~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~-~-~~~~~~~~~~---~~~~~~~i~~L~-p~~ 480 (633)
.|. +.+.. .....+.+.|.++.+. +....|.|.|+... . ...|...... .....++|..+. +++
T Consensus 97 ----~P~-l~c~~~~~~~~~~c~W~~~~~~----~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~ 167 (325)
T 1n26_A 97 ----EPQ-LSCFRKSPLSNVVCEWGPRSTP----SLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSS 167 (325)
T ss_dssp ----CCC-CEEEBSSTTSCEEEEECCSSCC----CTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCC
T ss_pred ----CCc-eeEEeecCCCcEEEEECCCCCC----CCCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCc
Confidence 344 44442 2356899999988743 24578999988652 1 1233222221 234577888876 889
Q ss_pred eEEEEEEEEeccccCCCCCCCCceeec-CCCCCCCcchHHHHHHHhCCceEEeeeeeecc--cceEEEEEEEecCCCccc
Q psy15127 481 SYMFIVRAENSHGLGIPSPVSPITRTL-GLNSLVPQHLLDEARARLGTKVVNLRELIPTA--STAVRITWEVSWGSVPQH 557 (633)
Q Consensus 481 ~Y~~~v~a~n~~G~g~~s~~~~~~~t~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~si~v~W~~p~~~~p~~ 557 (633)
.|.|+|.|.|..|.+.. ... .+.+. ...|.+|.++ .+..++ .+++.|+|++| .
T Consensus 168 ~Y~f~v~A~N~~G~~~s-~~~-~~~~~~~v~P~pP~~l----------------~v~~~~~~~~sv~lsW~~p------~ 223 (325)
T 1n26_A 168 FYIVSMCVASSVGSKFS-KTQ-TFQGCGILQPDPPANI----------------TVTAVARNPRWLSVTWQDP------H 223 (325)
T ss_dssp EEEEEEEEEETTEEEEC-CCE-EEETTTCBCCCCCEEE----------------EEEECTTCTTCEEEEEECC------T
T ss_pred EEEEEEEEEcCCCCccc-CcE-EEeeccccCCCCCcce----------------EEEEecCCCCEEEEEECCC------C
Confidence 99999999999999742 222 12222 2335555444 566654 36999999954 2
Q ss_pred ccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 558 LLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 558 ~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
..+.++.+++| .|+|+..+... |+... .....++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 224 ~~~~~~~~~~Y-~V~yr~~~~~~-------W~~~~-----~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~ 286 (325)
T 1n26_A 224 SWNSSFYRLRF-ELRYRAERSKT-------FTTWM-----VKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 286 (325)
T ss_dssp TCCCSSSCEEE-EEEEEETTCSC-------CEEEE-----CGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred ccCCCcEeEEE-EEEEEeCCCCC-------CEEEc-----ccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcC
Confidence 22356778999 99999886543 76432 234568899999999999999999999999999985
No 74
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.91 E-value=1.1e-22 Score=189.12 Aligned_cols=184 Identities=31% Similarity=0.541 Sum_probs=139.4
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC--CCCeEEcc--c--ceEEEccCCC-CCCeEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP--TGRAKILD--D--RSLQIENVGP-QDEGLYICDV 142 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~--~~~~~~~~--~--~~L~i~~v~~-~d~G~Y~C~~ 142 (633)
.+|.|...|.+..+.+|+.++|.|.+.+.|.+.+.|++++..+. ..+..... + ..|.|.+++. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 57999999999999999999999999999999999999999885 33443322 2 5899999999 9999999999
Q ss_pred EeCCce-EEEEEEEEEEeec------cccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc
Q psy15127 143 ENLVGS-ISLRASLTVHLLR------DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR 215 (633)
Q Consensus 143 ~n~~g~-~s~~~~l~V~~~~------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 215 (633)
.|..|. .+..+.|.|...+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+....
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~-~~g~p~p~i~W~~~~~~~~~~~-------- 155 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCK-AIGNPTPNIYWIKNQTKVDMSN-------- 155 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCE-EECSSCCEEEEEETTEECCTTS--------
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEE-eccCCCCeEEEEECCeEcccCC--------
Confidence 999988 7888899998752 34444555556666777777776 3555666666666655443210
Q ss_pred ceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc
Q psy15127 216 RTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT 295 (633)
Q Consensus 216 ~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 295 (633)
.+.. .
T Consensus 156 --------------------------------------------------------------------------~~~~-~ 160 (212)
T 2yd1_A 156 --------------------------------------------------------------------------PRYS-L 160 (212)
T ss_dssp --------------------------------------------------------------------------TTEE-E
T ss_pred --------------------------------------------------------------------------CeEE-c
Confidence 1111 1
Q ss_pred cCceEEEcCCCCCCCeEEEEEEEeCCceeEEE-EEEEEEeccc
Q psy15127 296 QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVREFCV 337 (633)
Q Consensus 296 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~ 337 (633)
.++.|.|.++..+|.|.|+|.|.|..|..... +.|.|.....
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 161 KDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp ETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred cCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 34589999999999999999999999998765 7888886543
No 75
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=1.2e-22 Score=185.88 Aligned_cols=181 Identities=24% Similarity=0.348 Sum_probs=133.6
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC---CeEE-cc--cceEEEccCCCCCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG---RAKI-LD--DRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~---~~~~-~~--~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
..+|.|...+....+.+|+.++|.|.+.+.|.+.+.|+|++..+... +... .. ...|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 35788999999999999999999999999999999999999988653 2222 22 348999999999999999999
Q ss_pred EeCCceEEEEEEEEEEe--eccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeee
Q psy15127 143 ENLVGSISLRASLTVHL--LRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGW 220 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 220 (633)
.|..+.....+.|.|.. .+|.+...+....+.+|+.+.|.|. ..+.|.+.+.|+++|..+...
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~v~W~~~~~~~~~~-------------- 147 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVR-VTGIPTPVVKFYRDGAEIQSS-------------- 147 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEE-EEEESCCEEEEEETTEECCCS--------------
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEE-EEEecCCeEEEEECCEECCCC--------------
Confidence 99999888888888874 2255555555555556666666665 244455555555554433211
Q ss_pred EEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cC
Q psy15127 221 LRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QE 297 (633)
Q Consensus 221 ~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~ 297 (633)
.+.... ..
T Consensus 148 ---------------------------------------------------------------------~~~~~~~~~~~ 158 (194)
T 2a38_A 148 ---------------------------------------------------------------------LDFQISQEGDL 158 (194)
T ss_dssp ---------------------------------------------------------------------SSEEEEEETTE
T ss_pred ---------------------------------------------------------------------CcEEEEEcCCE
Confidence 111111 12
Q ss_pred ceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 298 GTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 298 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
..|.|.++..+|.|.|+|.|.|..|..+.++.|.|+
T Consensus 159 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 159 YSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 279999999999999999999999999988888763
No 76
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.91 E-value=1.3e-22 Score=186.17 Aligned_cols=187 Identities=23% Similarity=0.302 Sum_probs=137.2
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC--CeEEc--cc--ceEEEccCCCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG--RAKIL--DD--RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~--~~~~~--~~--~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+... +.... .+ ..|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5789999999999999999999999999999999999999988643 33222 22 289999999999999999999
Q ss_pred eCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE
Q psy15127 144 NLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV 223 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (633)
|..|..+..+.|.|..+ |.+..++...
T Consensus 83 n~~g~~~~~~~l~V~~~-p~~~~~~~~~---------------------------------------------------- 109 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVP-AKIHLPKTLE---------------------------------------------------- 109 (197)
T ss_dssp ETTEEEEEEEEEEEEEE-EEECCSSCBT----------------------------------------------------
T ss_pred ECCCceeEEEEEEEcCC-CcCCCCcccc----------------------------------------------------
Confidence 99998888999999876 4332211000
Q ss_pred eeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEc
Q psy15127 224 RPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQ 303 (633)
Q Consensus 224 ~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~ 303 (633)
......+..|+.+.|.|.+.|.|.+.+.|++++..+.. ............+.|.|.
T Consensus 110 ----------------------~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~ 165 (197)
T 2j8h_A 110 ----------------------GMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDN--NGHYQVIVTRSFTSLVFP 165 (197)
T ss_dssp ----------------------TBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECS--SSSCEEEECSSEEEEECT
T ss_pred ----------------------ccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeec--CCCEEEEEcCCceEEEEe
Confidence 00112233455666666666666677777777665531 111111111234589999
Q ss_pred C-CCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 304 G-VQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 304 ~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
+ +..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 166 ~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 166 NGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp TCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9 99999999999999999999999988886
No 77
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=204.92 Aligned_cols=187 Identities=24% Similarity=0.359 Sum_probs=146.2
Q ss_pred ceEEEcCCC--C-CCeEEEEEEe------------cCcC-------CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEE
Q psy15127 48 SVLGARGAL--S-DDQWKLIAKE------------ALIK-------PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILW 105 (633)
Q Consensus 48 ~~L~i~~v~--~-~G~Y~C~a~~------------v~~~-------p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W 105 (633)
..|.|.+++ . +|.|+|.|.| +..+ |.+...+....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W 142 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITW 142 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEE
T ss_pred eEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEE
Confidence 469999986 3 9999999988 2222 7788888888999999999999999999999999
Q ss_pred EeCCccCCCC----CeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEE-EEEEEE--eeccccccCCCceEEecCCc
Q psy15127 106 RRDDGKMPTG----RAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLR-ASLTVH--LLRDDFRAEPKDTRVASGET 178 (633)
Q Consensus 106 ~~~~~~i~~~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~-~~l~V~--~~~p~~~~~~~~~~~~~g~~ 178 (633)
+|++..+... +.....++.|.|.+++.+|+|.|+|.|.|..|..... +.|.|. ..+|.+...+....+.+|+.
T Consensus 143 ~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~ 222 (304)
T 2yd9_A 143 FKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGN 222 (304)
T ss_dssp EETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCC
T ss_pred EECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCe
Confidence 9999887542 4445567799999999999999999999998875422 455553 33477777788888999999
Q ss_pred EEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeee--EEEeeeEEEEeecCCCC
Q psy15127 179 ALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGW--LRVRPLYWNVARPRANL 237 (633)
Q Consensus 179 ~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~y~C~a~~~~~~ 237 (633)
+.|.|. +.|.|.+.+.|++++..+....... .....+.+ ....|.|+|.|.|..+.
T Consensus 223 v~l~C~-~~g~p~p~v~W~~~~~~l~~~~~~~--~~~~~L~i~~~~d~G~Y~C~a~N~~G~ 280 (304)
T 2yd9_A 223 VNITCV-AVGSPMPYVKWMQGAEDLTPEDDMP--VGRNVLELTDVKDSANYTCVAMSSLGV 280 (304)
T ss_dssp EEEEEE-EEEESCCEEEEEETTEECSCSSSCC--BSEEEEEECSCCSCEEEEEEEEETTEE
T ss_pred EEEEEE-EeeeCCCEEEEEECCEECCCccccc--CCcEEEEEcccccCEEEEEEEEeCCCc
Confidence 999999 5889999999999999886543211 11111111 12368999999998774
No 78
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.90 E-value=3.7e-22 Score=181.99 Aligned_cols=179 Identities=22% Similarity=0.431 Sum_probs=140.0
Q ss_pred cCCeeeeCCCceEEEc-CCeEEEEEEEeccCC--CeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 70 IKPFPISEPSDATVLS-GSVVEFVCRVGGDPL--PTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~-G~~~~L~C~~~~~p~--p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
.+|.|... ....+.+ |+.+.|.|.+.+.|. +.+.|+|++..+...+... .+..|.|.+++.+|+|.|+|.+.|.
T Consensus 2 ~~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~- 78 (190)
T 2wv3_A 2 NEPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-SNMEYRINKPRAEDSGEYHCVYHFV- 78 (190)
T ss_dssp -CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-SEEEEEESSCCGGGCEEEEEEEEET-
T ss_pred CCCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-ccEEEEEecCCcccCEEEEEEEEeC-
Confidence 46777764 4555666 999999999998877 7899999999887654333 5678999999999999999999999
Q ss_pred ceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEE--CCEEeccCCCeeEEeccceeeeEEEe
Q psy15127 147 GSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKK--NGQFIDLESSKSLDLSRRTLGWLRVR 224 (633)
Q Consensus 147 g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (633)
+..+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..|.|.+.+.|++ ++..+....
T Consensus 79 ~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~v~l~C~-~~g~p~p~i~W~~~~~g~~~~~~~----------------- 139 (190)
T 2wv3_A 79 SAPKANATIEVKAA-PDITGHKRSENKNEGQDAMMYCK-SVGYPHPEWMWRKKENGVFEEISN----------------- 139 (190)
T ss_dssp TEEEEEEEEEEECC-CEEEEECSEEEEETTSCEEEEEE-EECSSCCEEEEEEEETTEEEECCC-----------------
T ss_pred CcccccEEEEEecC-CcccccCCcceeeCCCcEEEEEE-eCccCCCceEEEEcCCCceeeeec-----------------
Confidence 88899999999987 77777777777888888888888 4777777888877 555443110
Q ss_pred eeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cCceEE
Q psy15127 225 PLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLR 301 (633)
Q Consensus 225 g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~~l~ 301 (633)
...++... ..+.|.
T Consensus 140 ---------------------------------------------------------------~~~~~~~~~~~~~~~L~ 156 (190)
T 2wv3_A 140 ---------------------------------------------------------------SSGRFFIINKENYTELN 156 (190)
T ss_dssp ---------------------------------------------------------------TTSCEEEEECSSEEEEE
T ss_pred ---------------------------------------------------------------CCCeEEEecCCCeeEEE
Confidence 00111111 123799
Q ss_pred EcCCC-CCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 302 IQGVQ-KEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 302 i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
|.++. .+|.|.|+|.|.|..|..+.++.|.|.
T Consensus 157 i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 157 IVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99999 799999999999999999999888875
No 79
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.90 E-value=6.7e-23 Score=200.74 Aligned_cols=223 Identities=22% Similarity=0.292 Sum_probs=163.0
Q ss_pred cCCCCCCCCCCccccccceeeEEEEecccCC-CCCceEEe----eCceEEEcCCCC--CCeEEEEEEe------------
Q psy15127 7 TNHAHPMSSPRAEIEPATRTNRVSISGDPGF-DSRRSRSI----FGSVLGARGALS--DDQWKLIAKE------------ 67 (633)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~L~i~~v~~--~G~Y~C~a~~------------ 67 (633)
+.|......|.+.|+|+.. +|.+.. ...++.+. .+++|.|.+++. +|.|+|.|.|
T Consensus 22 l~C~~~~~~~~~~i~W~~~------~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l 95 (291)
T 1qz1_A 22 FLCQVAGDAKDKDISWFSP------NGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNV 95 (291)
T ss_dssp EEEEESSCCSCCEEEEECT------TSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeCCCCCCcEeEEECC------CCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEE
Confidence 3444333333567775442 243333 33455443 246899999998 9999999988
Q ss_pred -cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEEcccceEEEccCCCCCCeEEEEEEE
Q psy15127 68 -ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 68 -v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+.....++.|.|.+++.+|+|.|+|.|.
T Consensus 96 ~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 175 (291)
T 1qz1_A 96 KIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGR 175 (291)
T ss_dssp EEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEE
T ss_pred EeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEE
Confidence 45578888888888999999999999999999999999999987743 34555667899999999999999999999
Q ss_pred eCCce--EEEEEEEEEEeeccccccCCC--ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCC----eeEEecc
Q psy15127 144 NLVGS--ISLRASLTVHLLRDDFRAEPK--DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS----KSLDLSR 215 (633)
Q Consensus 144 n~~g~--~s~~~~l~V~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~----~~~~~~~ 215 (633)
|..+. .+..+.|.|..+ |.+...+. ...+.+|+.+.|.|. ..|.|.+.+.|+++|..+..... .......
T Consensus 176 n~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~~~g~~v~l~C~-~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~ 253 (291)
T 1qz1_A 176 ILARGEINFKDIQVIVNVP-PTVQARQSIVNATANLGQSVTLVCD-ADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 253 (291)
T ss_dssp EGGGTEEEEEEEEEEEEEE-EEEEESCSEEEEETTSCCCEEEEEE-EEEESCCEEEEEETTEECCCC--CCSSEEECTTS
T ss_pred ecCCCceeeEEEEEEEecC-CcccccccccccccccCceEEEEEE-EEEeCCCcEEEEECCEECcCCCCCCcceEEcCCC
Confidence 87643 456777888777 66555443 446778999999999 57899999999999998876541 1111112
Q ss_pred ceeeeEEE----eeeEEEEeecCCCC
Q psy15127 216 RTLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 216 ~~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
..+.+..+ .|.|+|.|.|..+.
T Consensus 254 ~~L~i~~v~~~d~G~Y~C~a~N~~G~ 279 (291)
T 1qz1_A 254 SELTIRNVDKNDEAEYVCIAENKAGE 279 (291)
T ss_dssp CEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred cEEEEEecChhcCEEEEEEEEeCCCc
Confidence 22333222 48999999998774
No 80
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.90 E-value=7e-23 Score=200.59 Aligned_cols=212 Identities=22% Similarity=0.305 Sum_probs=158.8
Q ss_pred cccccceeeEEEEecccCCCCCceEEeeCc---eEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeCCCc
Q psy15127 19 EIEPATRTNRVSISGDPGFDSRRSRSIFGS---VLGARGALS--DDQWKLIAKE-------------ALIKPFPISEPSD 80 (633)
Q Consensus 19 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~~~~ 80 (633)
.|.|+..+ |.....+.++.+..++ .|.|.+++. +|.|+|.+.+ +..+|.+...+..
T Consensus 34 ~v~W~~~~------g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~ 107 (291)
T 2wim_A 34 SIDWYNPQ------GEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSP 107 (291)
T ss_dssp EEECBCTT------CCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCS
T ss_pred ceEEECCC------CcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCC
Confidence 67755422 3444455666665544 799999999 9999999988 3456667777778
Q ss_pred eEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC---CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEE
Q psy15127 81 ATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP---TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS--ISLRASL 155 (633)
Q Consensus 81 ~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~---~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l 155 (633)
..+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|.+++.+|+|.|+|.+.|..+. ....+.|
T Consensus 108 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~ 187 (291)
T 2wim_A 108 QEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 187 (291)
T ss_dssp EEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred hhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEE
Confidence 889999999999999999999999999998774 34556666789999999999999999999998754 3566677
Q ss_pred EEEeeccccccCCC--ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE----eeeEEE
Q psy15127 156 TVHLLRDDFRAEPK--DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV----RPLYWN 229 (633)
Q Consensus 156 ~V~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~y~C 229 (633)
.|..+ |.+...+. ...+.+|+.+.|.|. ..|.|.+.+.|+++|..+.......+......+.+..+ .|.|+|
T Consensus 188 ~v~~~-p~~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 265 (291)
T 2wim_A 188 IVNVP-PAISMPQKSFNATAERGEEMTFSCR-ASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC 265 (291)
T ss_dssp EEEBC-CCCBCSCSEEECCSSSCCEEEEECB-CCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEE
T ss_pred EeccC-CccccCcccccceecCCCeEEEEEE-eecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEE
Confidence 77776 66655544 346778999999999 58889999999999998876554333333334444333 489999
Q ss_pred EeecCCCCC
Q psy15127 230 VARPRANLN 238 (633)
Q Consensus 230 ~a~~~~~~~ 238 (633)
.|.|..+..
T Consensus 266 ~a~N~~G~~ 274 (291)
T 2wim_A 266 RATNKAGED 274 (291)
T ss_dssp EEEETTEEE
T ss_pred EEEECCCce
Confidence 999988743
No 81
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.90 E-value=1.2e-22 Score=185.48 Aligned_cols=182 Identities=29% Similarity=0.503 Sum_probs=137.3
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC--CCeEEcc-cceEEEccCCCCCCeEEEEEEEe
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT--GRAKILD-DRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~--~~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
+..+|.|...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .+..... +..|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 35678888888889999999999999999999999999999988753 3444433 45799999999999999999999
Q ss_pred CCce-EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE
Q psy15127 145 LVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV 223 (633)
Q Consensus 145 ~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (633)
..|. .+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|
T Consensus 84 ~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~v~W--------------------------- 134 (192)
T 2iep_A 84 GVGGAVESCGALQVKMK-PKITRPPINVKIIEGLKAVLPCT-TMGNPKPSVSW--------------------------- 134 (192)
T ss_dssp SSSCCEEEEEEEEEEEE-EEEEECCCCEEEETTSCEEECCE-EEEESCCEEEE---------------------------
T ss_pred CCCceeEeEEEEEEEeC-CccccCCcceEEeCCCcEEEEEE-EeccCCceEEE---------------------------
Confidence 8877 567788888877 66666665566666666666666 34444444455
Q ss_pred eeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEc
Q psy15127 224 RPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQ 303 (633)
Q Consensus 224 ~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~ 303 (633)
++++..+. ...+.....++.|.|.
T Consensus 135 ---------------------------------------------------~~~~~~~~-----~~~~~~~~~~~~L~i~ 158 (192)
T 2iep_A 135 ---------------------------------------------------IKGDSALR-----ENSRIAVLESGSLRIH 158 (192)
T ss_dssp ---------------------------------------------------EETTEECC-----CCSSEEECTTSCEEES
T ss_pred ---------------------------------------------------EeCCEEcc-----CCCcEEEecCCcEEEe
Confidence 44444332 1123344456689999
Q ss_pred CCCCCCCeEEEEEEEeCCcee-EEEEEEEEEe
Q psy15127 304 GVQKEDAGFFVCSALSVAGST-TVRAFLQVRE 334 (633)
Q Consensus 304 ~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 334 (633)
++..+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 159 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 159 NVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 999999999999999999987 4457777764
No 82
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.90 E-value=1.5e-22 Score=186.91 Aligned_cols=186 Identities=21% Similarity=0.299 Sum_probs=145.3
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEee--eeceEEEecCCCCCeEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRI--TSTSITVSDLKPDTSYMFIV 486 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~i~~L~p~~~Y~~~v 486 (633)
.|.+|..+.+.. +.+++.|+|+++.+ +++++.+|.|+|+.......|....... ..+.+.+ +|.|++.|.|+|
T Consensus 5 ~P~~P~~~~~~~-~~~sv~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V 79 (205)
T 1cfb_A 5 VPNAPKLTGITC-QADKAEIHWEQQGD---NRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRV 79 (205)
T ss_dssp CCCCCEEEEEEE-CSSEEEEEEECCCC---TTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEE
T ss_pred CCCCCCCcEEEe-cCCEEEEEEECccc---CCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEE
Confidence 356788888888 99999999999963 3678999999998775556675433332 3456777 999999999999
Q ss_pred EEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhc
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARL 566 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~ 566 (633)
+|.|..|.|.++.....++|.+..|..+|..+ .+...+.++|.|+|++| ...+.+|.+.
T Consensus 80 ~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~---------------~~~~~~~~sv~l~W~~p------~~~~~ng~i~ 138 (205)
T 1cfb_A 80 IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNV---------------VGQGTEPNNLVISWTPM------PEIEHNAPNF 138 (205)
T ss_dssp EEEETTEECCCCCCCCCEEECCCCCSCCCSCC---------------EEECSSTTCEEEECCCC------CGGGTCSSSC
T ss_pred EEEECCccCCCCCCceeEEcCCcCCCCCCeee---------------EeecCCCCeEEEEEECC------CccccCCCce
Confidence 99999999999854446888887776544332 77888899999999954 3336788999
Q ss_pred ceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccccccccc
Q psy15127 567 GTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 567 ~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
+| .|+|+..+... .|.... ......++++|.+|++++.|.|+|+|.|..|.|++
T Consensus 139 ~Y-~v~~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 192 (205)
T 1cfb_A 139 HY-YVSWKRDIPAA------AWENNN----IFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNV 192 (205)
T ss_dssp EE-EEEEEESSTTC------CCEEEE----ECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSS
T ss_pred EE-EEEEEECCCCC------CcEEEE----ecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCC
Confidence 99 99999876653 254221 12335789999999999999999999999999995
No 83
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.90 E-value=1.3e-22 Score=188.26 Aligned_cols=190 Identities=15% Similarity=0.154 Sum_probs=144.0
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCC-CCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPR-GGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
++.+|..+.+...+.+++.|+|++|... .+.++.+.+|.|+|+..+... +...........++|.+|.|++.|.|+|+
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 82 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-TKYKNANATTLSYLVTGLKPNTLYEFSVM 82 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC----CCCEEEEESSSEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCc-ceEEEeCCCceEEEecCcCCCCEEEEEEE
Confidence 4567888888888999999999997532 112467899999999865432 22222344567899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeec--ccceEEEEEEEecCCCcccccchhhhh
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPT--ASTAVRITWEVSWGSVPQHLLDEARAR 565 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~si~v~W~~p~~~~p~~~~~~~~~i 565 (633)
|.|..|.|++|... .+.|.+..|..+|..+ .+... +.+++.|+|++| ...+|.+
T Consensus 83 A~n~~g~~~~S~~~-~~~t~~~~P~~~P~~~---------------~~~~~~~s~~sv~l~W~~p--------~~~~g~i 138 (211)
T 3p4l_A 83 VTKGRRSSTWSMTA-HGTTFELVPTSPPKDV---------------TVVSKEGKPKTIIVNWQPP--------SEANGKI 138 (211)
T ss_dssp EEETTEECCCCCCE-EEECCCCCCCSCCEEE---------------EEEEETTEEEEEEEEEECC--------TTCCSCC
T ss_pred EEcCCCCCccceeE-eeecccCCCCCCCcce---------------EEEecCCCCCEEEEEECCC--------CCCCCCE
Confidence 99999999988765 5777777776444321 56666 478999999955 4567899
Q ss_pred cceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 566 LGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 566 ~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.+| .|+|+....... ..|. .....+..++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 139 ~~Y-~v~~~~~~~~~~----~~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 196 (211)
T 3p4l_A 139 TGY-IIYYSTDVNAEI----HDWV-----IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSE 196 (211)
T ss_dssp CEE-EEEEESCTTSCG----GGSE-----EEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCC
T ss_pred EEE-EEEEEECCCCCC----CceE-----EEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 999 999987655431 1121 122345788999999999999999999999999999985
No 84
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=3.6e-24 Score=222.44 Aligned_cols=278 Identities=13% Similarity=0.136 Sum_probs=173.0
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEe------------cC----cCCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKE------------AL----IKPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~------------v~----~~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
.|+.+.. +++|.|.+++. +|.|+|.|.+ +. .+|.+...+....+.+|+.++|.|.+.
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~ 144 (434)
T 1igy_B 65 DKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVK 144 (434)
T ss_dssp TTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEe
Confidence 4666543 24799999998 9999999976 21 235444333333457899999999998
Q ss_pred cc-CCC-eEEEEeCCccCCCC-------CeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEe--------
Q psy15127 97 GD-PLP-TILWRRDDGKMPTG-------RAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHL-------- 159 (633)
Q Consensus 97 ~~-p~p-~i~W~~~~~~i~~~-------~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~-------- 159 (633)
|. |.| .|.|+|++..+... .......+.|.|.+++.+| |.|+|.|.|..+.......+.+..
T Consensus 145 g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~ 223 (434)
T 1igy_B 145 GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCIC 223 (434)
T ss_dssp EEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCC
T ss_pred eecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccC
Confidence 86 776 99999998754210 0111123579999999999 999999999988744444443321
Q ss_pred -ec--ccc-ccCCCceE-EecCCcEEEEEeCCCCCC----CCeEEEEECCEEeccCCCeeEE-ec------cceeeeEE-
Q psy15127 160 -LR--DDF-RAEPKDTR-VASGETALLECGPPKGQP----EPTLHWKKNGQFIDLESSKSLD-LS------RRTLGWLR- 222 (633)
Q Consensus 160 -~~--p~~-~~~~~~~~-~~~g~~~~l~C~~~~~~p----~~~i~W~~~~~~~~~~~~~~~~-~~------~~~~~~~~- 222 (633)
.. |.+ ..+|.... +.+|+.+.|.|.+. |.+ .+.|.|++++..+......... .. ...+.+..
T Consensus 224 ~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~-g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 302 (434)
T 1igy_B 224 TVPEVSSVFIFPPKPKDTLLITVTPKVTCVVV-DISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQ 302 (434)
T ss_dssp CCSSSCCEEEECCCHHHHHSTTSCCEEEEEEC-CCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHH
T ss_pred CCCcCcEEEEeCCChHHhcccCCCcEEEEEEe-ccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHH
Confidence 00 222 22333222 78899999999964 553 4589999999776432111100 00 11222222
Q ss_pred ---EeeeEEEEeecCCCCCCc---cc----ccccceeEEe------cCCceEEEEEEEeeecCC--eeEEEECCEEEEec
Q psy15127 223 ---VRPLYWNVARPRANLNPR---YI----GRKMASLLIW------NHPRVNRLSCFAEGSPLP--SVFWTQEGSQVLMF 284 (633)
Q Consensus 223 ---~~g~y~C~a~~~~~~~p~---~~----~~~~~~~~~~------~~g~~~~l~C~~~g~p~~--~v~W~~~g~~~~~~ 284 (633)
..|.|+|.|.|..+..+. +. ....+..... ..|+.++|.|.+.|.+++ .|.|+++|..+...
T Consensus 303 ~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 382 (434)
T 1igy_B 303 DWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENY 382 (434)
T ss_dssp HHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCC
T ss_pred HccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCc
Confidence 248999999998774311 10 0111111111 246679999999996543 89999999876311
Q ss_pred cCCccceEEEccC------ceEEEcCCCCCCCeEEEEEEEeCCc
Q psy15127 285 PGNAYGHLHVTQE------GTLRIQGVQKEDAGFFVCSALSVAG 322 (633)
Q Consensus 285 ~~~~~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~a~n~~g 322 (633)
.........+ +.|.|.....+|.|.|+|.|.|...
T Consensus 383 ---~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 383 ---KNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp ---EECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred ---eeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 0000001122 2466777777789999999999754
No 85
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.89 E-value=1.7e-22 Score=187.22 Aligned_cols=182 Identities=18% Similarity=0.280 Sum_probs=142.0
Q ss_pred CCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEee----eeceEEEecCCCCCeEEEE
Q psy15127 410 PGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRI----TSTSITVSDLKPDTSYMFI 485 (633)
Q Consensus 410 p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~~~Y~~~ 485 (633)
|++|..+.+...+. ++.|+|.+|... ++.++.+|.|+|+..+. ..|....... ....++|.+|.|++.|.|+
T Consensus 9 P~~P~~~~~~~~~~-s~~l~W~~p~~~--~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 84 (209)
T 2vkw_A 9 PSSPSIDQVEPYSS-TAQVQFDEPEAT--GGVPILKYKAEWRAVGE-EVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 84 (209)
T ss_dssp CCCCEEEEEEECSS-CEEEEEECCSCC--CSSCCCEEEEEEEESSC-CCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEE
T ss_pred CcCCcccEeeeccC-eEEEEEcCCCcC--CCcceeEEEEEEeeCCC-CCceEeEeeccCCCccceEEeCCCCCCCeEEEE
Confidence 55677777766666 689999998643 24569999999997653 4565443321 2468999999999999999
Q ss_pred EEEEeccccCCCCCCCCceeecCC-CCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhh
Q psy15127 486 VRAENSHGLGIPSPVSPITRTLGL-NSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARA 564 (633)
Q Consensus 486 v~a~n~~G~g~~s~~~~~~~t~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~ 564 (633)
|+|.|..|.|+++... .+.|.+. +|.+|..+ .+..++.++|.|+|++| .+.++.
T Consensus 85 V~A~n~~G~~~~s~~~-~~~T~~~~~P~~P~~~----------------~~~~~~~~sv~l~W~~p--------~~~~~~ 139 (209)
T 2vkw_A 85 LAALNGKGLGEISAAS-EFKTQPVREPSAPKLE----------------GQMGEDGNSIKVNLIKQ--------DDGGSP 139 (209)
T ss_dssp EEEEETTEECCCCCCE-EEECCCSCSCCCCEEE----------------EEECTTSSCEEEEEECC--------CCTTSC
T ss_pred EEEEcCCcccCCcccc-cccccCCCCCCCCccc----------------ccccccCCeEEEEEECc--------ccCCCC
Confidence 9999999999988766 3666665 66666655 77888999999999954 567899
Q ss_pred hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 565 RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 565 i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.+| .|+|+. ... .|... ....+..++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 140 i~~Y-~v~~~~-~~~-------~~~~~----~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~ 195 (209)
T 2vkw_A 140 IRHY-LVRYRA-LSS-------EWKPE----IRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAH 195 (209)
T ss_dssp CCEE-EEEEEE-TTS-------CCCCC----EEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CceE-EEEEEC-CCC-------CCcee----eecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcch
Confidence 9999 999998 332 24432 22345678999999999999999999999999999984
No 86
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.89 E-value=3.8e-22 Score=186.15 Aligned_cols=190 Identities=40% Similarity=0.636 Sum_probs=149.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC----CeEEcccceE----EEccCCCCCCeEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG----RAKILDDRSL----QIENVGPQDEGLYIC 140 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~----~~~~~~~~~L----~i~~v~~~d~G~Y~C 140 (633)
..+|.|...|..+.+.+|+.+.|.|.+.+.|.+.|.|+|+|..+... ......++.+ .|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 45789999999999999999999999999999999999999988643 2333344443 688999999999999
Q ss_pred EEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceee
Q psy15127 141 DVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLG 219 (633)
Q Consensus 141 ~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 219 (633)
.+.|..|.. +..+.|.|...+|.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+.........
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~------- 159 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFG------- 159 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC----------
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccc-------
Confidence 999988875 456778887765777778888889999999999995588899999999998876532110000
Q ss_pred eEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCce
Q psy15127 220 WLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGT 299 (633)
Q Consensus 220 ~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (633)
...+.....++.
T Consensus 160 --------------------------------------------------------------------~~~~~~~~~~~~ 171 (217)
T 2vr9_A 160 --------------------------------------------------------------------ASSRVRIVDGGN 171 (217)
T ss_dssp --------------------------------------------------------------------CCCSEEEETTTE
T ss_pred --------------------------------------------------------------------cCCcEEecCCCc
Confidence 012223335568
Q ss_pred EEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 300 LRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 300 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
|.|.++..+|.|.|+|.|.|..|....+..+.+.
T Consensus 172 L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 172 LLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 9999999999999999999999998777655554
No 87
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.89 E-value=7.5e-22 Score=207.33 Aligned_cols=254 Identities=15% Similarity=0.144 Sum_probs=156.8
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQ 126 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~ 126 (633)
.+..|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... +..|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMG 83 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEE
Confidence 34567888999999999999998754 5689999953 211 023333332 24799
Q ss_pred EccCCCCCCeEEEEEEEeCCc------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC-C-eEE
Q psy15127 127 IENVGPQDEGLYICDVENLVG------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE-P-TLH 195 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~-~i~ 195 (633)
|.+++.+|+|.|.|.+.+..| .....+.|.|... +|.+...+ ...+.+|+.+.|.|.+....|. + .|.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~~p~~v~ 162 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQEPLSVT 162 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCCCceEEE
Confidence 999999999999999998765 2334567777641 23333222 1223689999999995444466 5 999
Q ss_pred EEECCEEeccCCCeeEE-eccc------eeeeE----EEeeeEEEEeecCCCCCCccccc--------------------
Q psy15127 196 WKKNGQFIDLESSKSLD-LSRR------TLGWL----RVRPLYWNVARPRANLNPRYIGR-------------------- 244 (633)
Q Consensus 196 W~~~~~~~~~~~~~~~~-~~~~------~~~~~----~~~g~y~C~a~~~~~~~p~~~~~-------------------- 244 (633)
|++++............ .... .+.+. ...|.|+|.|.|..+........
T Consensus 163 W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~ 242 (475)
T 1iga_A 163 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSP 242 (475)
T ss_pred EcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCC
Confidence 99988532211000000 0111 12222 12489999999987532100000
Q ss_pred --cccee-------EEecCCceEEEEEEEeeecC---CeeEEEECCEEEEeccCCccceE---EEccCceEEEcCCCCCC
Q psy15127 245 --KMASL-------LIWNHPRVNRLSCFAEGSPL---PSVFWTQEGSQVLMFPGNAYGHL---HVTQEGTLRIQGVQKED 309 (633)
Q Consensus 245 --~~~~~-------~~~~~g~~~~l~C~~~g~p~---~~v~W~~~g~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d 309 (633)
..... ..+..|+.++|.|.+.|.++ +.+.| ++..+.........+. .....+.|.|.++..+|
T Consensus 243 ~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d 320 (475)
T 1iga_A 243 SCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNH 320 (475)
T ss_pred CCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhcc
Confidence 00111 11467899999999998865 69999 4443321100000000 01134479999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEE
Q psy15127 310 AGFFVCSALSVAGSTTVRAFL 330 (633)
Q Consensus 310 ~G~Y~C~a~n~~g~~~~~~~l 330 (633)
+|.|+|.|.|..|.......|
T Consensus 321 ~G~Y~C~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 321 GKTFTCTAAYPESKTPLTATL 341 (475)
T ss_pred CCcEEEEEEcCCCCCceEEEe
Confidence 999999999998875444344
No 88
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.89 E-value=6.7e-22 Score=181.29 Aligned_cols=181 Identities=23% Similarity=0.372 Sum_probs=139.7
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcccc---eEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDDR---SLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.+...+.++.+.+|+.+.|.|.+.+.|.+.+.|+|++..+... +.....++ .|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 45788999999999999999999999999999999999999987654 33333333 799999999999999999999
Q ss_pred CCceEEEEEEEEEEeecccccc---CCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeE
Q psy15127 145 LVGSISLRASLTVHLLRDDFRA---EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWL 221 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (633)
..+.....+.|.|..+ |.+.. .+....+.+|+.+.|.|. ..+.|.+.+.|++++..+....
T Consensus 85 ~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~p~v~W~~~~~~~~~~~-------------- 148 (197)
T 3lcy_A 85 EVGEVETSSKLLLQAT-PQFHPGYPLKEKYYGAVGSTLRLHVM-YIGRPVPAMTWFHGQKLLQNSE-------------- 148 (197)
T ss_dssp SSCEEEEEEEEEEEEE-EEECTTSCCCSEEEEETTSCEEEEEE-EEEESCCEEEEEETTEECCCCS--------------
T ss_pred CCCceeEEEEEEEEcC-CCCCCCccCCcceeecCCCeEEEEEE-EeeeeCCeeEEeECCEECCCCC--------------
Confidence 9998888899999887 44332 123445667877777777 4566666666666665443211
Q ss_pred EEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cCc
Q psy15127 222 RVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEG 298 (633)
Q Consensus 222 ~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~ 298 (633)
+.... ...
T Consensus 149 ---------------------------------------------------------------------~~~~~~~~~~~ 159 (197)
T 3lcy_A 149 ---------------------------------------------------------------------NITIENTEHYT 159 (197)
T ss_dssp ---------------------------------------------------------------------SEEEEECSSEE
T ss_pred ---------------------------------------------------------------------ceEEEEcCCEE
Confidence 11111 124
Q ss_pred eEEEcCCCC-CCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 299 TLRIQGVQK-EDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 299 ~l~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
.|.|.++.. +|.|.|+|.|.|..|..+..+.|.|.+
T Consensus 160 ~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 160 HLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 799999985 899999999999999999999988864
No 89
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.6e-21 Score=177.59 Aligned_cols=179 Identities=26% Similarity=0.399 Sum_probs=128.6
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC---CCCeEEcccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP---TGRAKILDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~---~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
.+|.|...|....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..+.....++.|.|.+++.+|+|.|+|.+.+..
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 36889999999999999999999999999999999999998764 345666677899999999999999999999886
Q ss_pred ce--EEEEEEEEEEeeccccccCCC--ceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEE
Q psy15127 147 GS--ISLRASLTVHLLRDDFRAEPK--DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLR 222 (633)
Q Consensus 147 g~--~s~~~~l~V~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (633)
+. ....+.|.|..+ |.+...+. ...+.+|
T Consensus 81 ~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~~~g---------------------------------------------- 113 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVP-PAISMPQKSFNATAERG---------------------------------------------- 113 (189)
T ss_dssp TTEEEEEEEEEEEEEE-EEEECSCCEEEEETTSC----------------------------------------------
T ss_pred CCceEEEEEEEEecCC-CCcccccccccccccCC----------------------------------------------
Confidence 44 345566667665 44433322 1223334
Q ss_pred EeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEE-EccCceEE
Q psy15127 223 VRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLH-VTQEGTLR 301 (633)
Q Consensus 223 ~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~-~~~~~~l~ 301 (633)
+.+.|.|.+.|.|.+.+.|+++|..+.. ..+.. ...++.|.
T Consensus 114 ---------------------------------~~v~l~C~~~g~p~~~v~W~~~g~~~~~-----~~~~~~~~~~~~L~ 155 (189)
T 2v5t_A 114 ---------------------------------EEMTFSCRASGSPEPAISWFRNGKLIEE-----NEKYILKGSNTELT 155 (189)
T ss_dssp ---------------------------------CCEEEECEEEEESCCEEEEEETTEECCC-----SSSEEEETTTTEEE
T ss_pred ---------------------------------CcEEEEEEEccCCCCeEEEEECCEECcC-----CCcEEEecCCCEEE
Confidence 4455555555555556666666654421 11112 22356899
Q ss_pred EcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 302 IQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 302 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 156 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 156 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999999999999999999998888875
No 90
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.89 E-value=1.3e-21 Score=178.51 Aligned_cols=179 Identities=25% Similarity=0.387 Sum_probs=137.6
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccC-CCeEEEEe-CCccCCC--CCeEEc----ccceEEEccCCCCCCeEEEEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDP-LPTILWRR-DDGKMPT--GRAKIL----DDRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~-~~~~i~~--~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
++.+...|.+..+.+|+.++|.|.+.+.+ .+.+.|++ ++..+.. .+.... ....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 46778889999999999999999998876 78999999 8877653 233332 3468999999999999999999
Q ss_pred EeCC-ceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeE
Q psy15127 143 ENLV-GSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWL 221 (633)
Q Consensus 143 ~n~~-g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (633)
.+.. +..+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+....
T Consensus 82 ~~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~v~W~~~~~~~~~~~-------------- 145 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQK-LMFKNAPTPQEFKEGEDAVIVCD-VVSSLPPTIIWKHKGRDVILKK-------------- 145 (191)
T ss_dssp EETTTEEEEEEEEEEEECC-SEEEECCSSEECCTTSCEEECCE-EECSSCCEEEEEETTEEGGGGC--------------
T ss_pred EcCCCcceEEEEEEEeecC-ceEecCCCcEeecCCCeEEEEEE-ECCCCCCEEEEEECCEEeeccC--------------
Confidence 9998 55778888888877 77777777777778888888887 4566667777777665543211
Q ss_pred EEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEE
Q psy15127 222 RVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLR 301 (633)
Q Consensus 222 ~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~ 301 (633)
..++....++.|.
T Consensus 146 -------------------------------------------------------------------~~~~~~~~~~~L~ 158 (191)
T 1epf_A 146 -------------------------------------------------------------------DVRFIVLSNNYLQ 158 (191)
T ss_dssp -------------------------------------------------------------------CTTEEECTTSCEE
T ss_pred -------------------------------------------------------------------CceEEEecCCeEE
Confidence 1223344556899
Q ss_pred EcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 302 IQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 302 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp ETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 9999999999999999999976666555554
No 91
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.89 E-value=1.1e-23 Score=227.83 Aligned_cols=366 Identities=15% Similarity=0.140 Sum_probs=223.4
Q ss_pred cccCCCceEEecCCcEEEEEeCCC------CCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEE---eeeEEEEeecC
Q psy15127 164 FRAEPKDTRVASGETALLECGPPK------GQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRV---RPLYWNVARPR 234 (633)
Q Consensus 164 ~~~~~~~~~~~~g~~~~l~C~~~~------~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~y~C~a~~~ 234 (633)
..+.|.+..+..|++++|.|.+.. +.+.+.|.|++||..+.......+......+.+..+ .+.|.|.+...
T Consensus 6 ~~i~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~y~C~~~~~ 85 (589)
T 3l5h_A 6 GYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTF 85 (589)
T ss_dssp CCCSCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCCCCCC-CCT
T ss_pred eEEecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHccccCCcEeEEEEecCCCcceeeEEecccC
Confidence 345677788899999999999532 567789999999976654322221111122222222 35788987642
Q ss_pred CCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEE
Q psy15127 235 ANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFV 314 (633)
Q Consensus 235 ~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 314 (633)
....... ......+...++....|.|...+.....+.|....... ....+.|.--. .+.....
T Consensus 86 ~~~~~~~--~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~--------------~~~~y~l~~~~-~~~~~~~ 148 (589)
T 3l5h_A 86 GQLEQNV--YGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH--------------LETNFTLKSEW-ATHKFAD 148 (589)
T ss_dssp TCC-CCC--CCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCSCCS--------------SCEEEEECCBC-SSSBCCC
T ss_pred CCcccEE--EeEEEeccCCCCCCEeeEEEECCCceEEEEECCCCcCC--------------cCceEEEEEEE-cCCCccc
Confidence 2211000 00001111234556789999988877889998753210 00122222110 1111122
Q ss_pred EEEEeCCceeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEe-cccccCCEEEEEEEEcCCcceeE-EEEEEee
Q psy15127 315 CSALSVAGSTTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIAC-DLRETDSGLYTCTASSESGETSW-SASLSVE 392 (633)
Q Consensus 315 C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~-~~~~~d~g~y~c~a~n~~g~~~~-~~~l~v~ 392 (633)
|..... + .....+. .+.....|.|+|.|.|..|.... ...+...
T Consensus 149 c~~~~~-~---------------------------------~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~ 194 (589)
T 3l5h_A 149 CKAKRD-T---------------------------------PTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPV 194 (589)
T ss_dssp EECBTT-B---------------------------------SSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGG
T ss_pred CCCCCC-C---------------------------------cEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccc
Confidence 321100 0 0111122 45566789999999999997522 2222211
Q ss_pred cCCCCCceecCCCCCCCCCCCCCcEEE--EeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEE---eee
Q psy15127 393 PRPGPHAVHRMPDSGLFPGPPAAPVIL--NTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAH---RIT 467 (633)
Q Consensus 393 ~~p~~~~~~~~~~~~~~p~~p~~~~~~--~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~ 467 (633)
. ...|.+|..+.+. ....+++.|+|++|... ++.+..|.|+|+..+. ..|..... ...
T Consensus 195 ~-------------~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~---~~~~~~Y~v~~~~~~~-~~w~~~~~~~~~~~ 257 (589)
T 3l5h_A 195 Y-------------KVKPNPPHNLSVINSEELSSILKLTWTNPSIK---SVIILKYNIQYRTKDA-STWSQIPPEDTAST 257 (589)
T ss_dssp G-------------SEECCCCCSCEEECTTTCTTCEEEECCCCGGG---GTSCEEEEEEEEETTC-SCCBCCCTTSSCSC
T ss_pred c-------------EEEcCCCceEEEEecCCCCCeEEEEeCCCCCC---CeeeEEEEEEECCCCC-CCcEEEccccCcCc
Confidence 1 1235678888773 46788999999998753 4688999999998753 45653211 223
Q ss_pred eceEEEecCCCCCeEEEEEEEEeccccCCCCCCCC--ceeecCCCCCCCcchHHHHHHHhCCceEEeeee-eecccceEE
Q psy15127 468 STSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSP--ITRTLGLNSLVPQHLLDEARARLGTKVVNLREL-IPTASTAVR 544 (633)
Q Consensus 468 ~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~--~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~si~ 544 (633)
...++|.+|.|++.|.|+|+|.|..|.|.+|.++. .+.|.+..|..+|... ... .+ ...+.+++.
T Consensus 258 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~-----------~~v-~~~~~~~~~~v~ 325 (589)
T 3l5h_A 258 RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFW-----------YKI-DPSHTQGYRTVQ 325 (589)
T ss_dssp CSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEE-----------EEC-CSCSSTTSCCEE
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEE-----------EEe-ecCcCCCcceEE
Confidence 57899999999999999999999999988865442 2467777775555421 000 11 356789999
Q ss_pred EEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccc
Q psy15127 545 ITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFF 624 (633)
Q Consensus 545 v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n 624 (633)
|.|++ +.....+|.|.+| .|.|+..+.. |.. .....+.+++ |.+++.|.|+|.|.|
T Consensus 326 l~W~p------~~~~~~~g~i~~Y-~v~~~~~~~~--------~~~-------~~~~~~~~~~--l~~~~~Y~~~V~A~n 381 (589)
T 3l5h_A 326 LVWKT------LPPFEANGKILDY-EVTLTRWKSH--------LQN-------YTVNATKLTV--NLTNDRYLATLTVRN 381 (589)
T ss_dssp EEECC------CCTTTSSSCCCEE-EEEECCTTSC--------CCB-------CCCSSSCCEE--CCCSSCCCEEEEEEB
T ss_pred EEEee------CCchhccCceeeE-EEEEecCCCC--------cee-------eccCCceEEE--EeCCCCEEEEEEEEe
Confidence 99994 3335678999999 9999765543 221 1122344444 899999999999999
Q ss_pred cccccccCC
Q psy15127 625 KTVEGARLD 633 (633)
Q Consensus 625 ~~g~g~~s~ 633 (633)
..|.|++|.
T Consensus 382 ~~G~~~~s~ 390 (589)
T 3l5h_A 382 LVGKSDAAV 390 (589)
T ss_dssp TTBCCCCCC
T ss_pred CCccCCCeE
Confidence 999999874
No 92
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=9.1e-22 Score=182.77 Aligned_cols=185 Identities=38% Similarity=0.645 Sum_probs=142.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC------CeEEcccceE-----EEccCCCCCCeE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG------RAKILDDRSL-----QIENVGPQDEGL 137 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~------~~~~~~~~~L-----~i~~v~~~d~G~ 137 (633)
..+|.|...|..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+... ......++.+ .|.+++.+|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 35788999999999999999999999999999999999999887532 2333344444 445678999999
Q ss_pred EEEEEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccc
Q psy15127 138 YICDVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRR 216 (633)
Q Consensus 138 Y~C~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 216 (633)
|+|.+.|..|.. +..+.|.|...++.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+....
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~--------- 157 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD--------- 157 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS---------
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc---------
Confidence 999999988874 5677888887756677777778888999999999844777777888887776554211
Q ss_pred eeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEcc
Q psy15127 217 TLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ 296 (633)
Q Consensus 217 ~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 296 (633)
.+.. ..
T Consensus 158 -------------------------------------------------------------------------~~~~-~~ 163 (212)
T 2v9r_A 158 -------------------------------------------------------------------------ERIT-IR 163 (212)
T ss_dssp -------------------------------------------------------------------------TTEE-EE
T ss_pred -------------------------------------------------------------------------ceEE-cc
Confidence 0111 12
Q ss_pred CceEEEcCCCCCCCeEEEEEEEeCCceeEEE-EEEEEEecc
Q psy15127 297 EGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVREFC 336 (633)
Q Consensus 297 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~ 336 (633)
++.|.|.++..+|.|.|+|.|.|..|..... +.|.|.+.+
T Consensus 164 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 164 GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 4589999999999999999999999987554 788887543
No 93
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.88 E-value=8.7e-22 Score=183.19 Aligned_cols=186 Identities=24% Similarity=0.307 Sum_probs=144.0
Q ss_pred CCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEe------------eeeceEEEecCCC
Q psy15127 411 GPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHR------------ITSTSITVSDLKP 478 (633)
Q Consensus 411 ~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p 478 (633)
.+|..+.+...+.+++.|+|.++... ++++.+|.|+|+..+....|...... .....+++.+|.|
T Consensus 3 ~pP~~~~~~~~~~~sv~l~W~~p~~~---~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 79 (214)
T 2ibg_A 3 YPPTPPNVTRLSDESVMLRWMVPRND---GLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKP 79 (214)
T ss_dssp CCCCCCEEEEEETTEEEEEEEEECCS---SCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCT
T ss_pred CCCCCCEeeEecCCEEEEEEECCCCC---CCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcC
Confidence 46778888889999999999998854 47899999999987655677654321 3456889999999
Q ss_pred CCeEEEEEEEEeccccCCCCCCCCceeecCCC----CCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCC
Q psy15127 479 DTSYMFIVRAENSHGLGIPSPVSPITRTLGLN----SLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSV 554 (633)
Q Consensus 479 ~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~ 554 (633)
++.|.|+|+|.|..|.|..+.....+.+.... |.+|..+ .+..++.++|.|+|++|
T Consensus 80 ~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~----------------~~~~~~~~sv~l~W~~p---- 139 (214)
T 2ibg_A 80 QHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELL----------------EIEEYSETAVVLHWSLA---- 139 (214)
T ss_dssp TCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEEC----------------CCBCCSSSCEEEEEECC----
T ss_pred CCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCccc----------------EEEEccCCeEEEEEeCC----
Confidence 99999999999999998877654344544432 2233333 67788899999999954
Q ss_pred cccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 555 PQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 555 p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
. ...++.+.+| .|+|+..+... .|.... + .....++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 140 --~-~~~~~~i~~Y-~v~~~~~~~~~------~~~~~~---~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 204 (214)
T 2ibg_A 140 --S-DADEHLITGY-YAYYRPSSSAG------EYFKAT---I-EGAHARSFKIAPLETATMYEFKLQSFSAASASEFSA 204 (214)
T ss_dssp --T-TCCGGGCCEE-EEEEEETTCCS------CCEEEE---E-ECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCC
T ss_pred --C-ccCCCCcceE-EEEEEECCCCc------ceEEee---c-cCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcc
Confidence 2 3578999999 99999877622 254321 1 223468999999999999999999999999999985
No 94
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=2.4e-21 Score=176.34 Aligned_cols=177 Identities=20% Similarity=0.332 Sum_probs=132.7
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe-CCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR-DDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~-~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
.+...|....+.+|+.+.|.|.+.+.|. .+.|++ ++..+... +.....+ ..|.|.+++.+|+|.|+|.+.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4677888999999999999999998877 899999 77776543 4444333 4899999999999999999999988
Q ss_pred eE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeee
Q psy15127 148 SI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPL 226 (633)
Q Consensus 148 ~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 226 (633)
.. +..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+.+.|++++..+..
T Consensus 83 ~~~~~~~~l~v~~~-p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~v~W~~~~~~~~~--------------------- 139 (189)
T 2v44_A 83 QTQEATVVLEIYQK-LTFREVVSPQEFKQGEDAEVVCR-VSSSPAPAVSWLYHNEEVTT--------------------- 139 (189)
T ss_dssp CEEEEEEEEEEECC-CEEESCCCSEEEETTSCEEECCE-EECSSCCEEEEEEEC--CEE---------------------
T ss_pred CcEEEEEEEEEecC-CceeecCCcEEEeCCCCEEEEEE-ECcCCCCcEEEEECCcEEec---------------------
Confidence 75 77888888877 66665666667777777777777 34666666666665543321
Q ss_pred EEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCC
Q psy15127 227 YWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQ 306 (633)
Q Consensus 227 y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 306 (633)
. ...++....++.|.|.++.
T Consensus 140 ---------------------------------------------------------~---~~~~~~~~~~~~L~i~~v~ 159 (189)
T 2v44_A 140 ---------------------------------------------------------I---SDNRFAMLANNNLQILNIN 159 (189)
T ss_dssp ---------------------------------------------------------C---CCTTEEECTTSCEEETTCC
T ss_pred ---------------------------------------------------------c---CCCCEEEecCCcEEEEEcC
Confidence 1 1123344456689999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 307 KEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 307 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.+|+|.|+|.|.|..|.......+.|.
T Consensus 160 ~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 160 KSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp GGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cccCeEEEEEEEccccCceeeeeEEEE
Confidence 999999999999999777655555543
No 95
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=179.22 Aligned_cols=173 Identities=25% Similarity=0.404 Sum_probs=132.5
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCCC---eEE--cc--------cceEEEccCCCCCCe
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTGR---AKI--LD--------DRSLQIENVGPQDEG 136 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~~---~~~--~~--------~~~L~i~~v~~~d~G 136 (633)
+|.|+..|.+..+.+|+.+.|.|.+. +.|.+.+.|+|++..+.... ... .. .+.|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 68899999999999999999999998 89999999999999887552 111 11 358999999999999
Q ss_pred EEEEEEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEeccCCCeeEEec
Q psy15127 137 LYICDVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFIDLESSKSLDLS 214 (633)
Q Consensus 137 ~Y~C~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~~~~~~~ 214 (633)
.|+|.+.+..+.. +..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+ .+.|++++..+....
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~~v~W~~~~~~~~~~~------- 152 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL-PYFLEEPEDRTVAANTPFNLSCQ-AQGPPEPVDLLWLQDAVPLATAP------- 152 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS-CEEEECCCCEEECTTCCEEEEEE-EECSSCCCEEEEEESSCBSSSST-------
T ss_pred EEEEEEEeCCCceecccEEEEEecC-CeEEcCCCcEEEcCCCEEEEEeE-CCCCCCCCEEEEEECCEeccCCC-------
Confidence 9999999987764 34488888877 77666666666777777777777 3555655 666666554332110
Q ss_pred cceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE
Q psy15127 215 RRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV 294 (633)
Q Consensus 215 ~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 294 (633)
..
T Consensus 153 ---------------------------------------------------------------------------~~--- 154 (195)
T 2c5d_C 153 ---------------------------------------------------------------------------GH--- 154 (195)
T ss_dssp ---------------------------------------------------------------------------TS---
T ss_pred ---------------------------------------------------------------------------Cc---
Confidence 00
Q ss_pred ccCceEEEcCCCCCCCeEEEEEEEeCCceeE-EEEEEEE
Q psy15127 295 TQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQV 332 (633)
Q Consensus 295 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 332 (633)
..++.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 155 ~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 234578898887 78999999999999885 6888877
No 96
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.88 E-value=9.5e-25 Score=226.80 Aligned_cols=250 Identities=14% Similarity=0.145 Sum_probs=158.6
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i 127 (633)
+..+..+.+.+|++++|.|.+.+.+ .+.|.|+|++ ..+ ..+++.... ...|.|
T Consensus 3 l~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (434)
T 1igy_B 3 LQESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHL 82 (434)
T ss_dssp EECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEE
T ss_pred eECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEE
Confidence 3556778899999999999998764 6689999963 221 023444332 247999
Q ss_pred ccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEe
Q psy15127 128 ENVGPQDEGLYICDVENLVGSISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFI 203 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 203 (633)
.+++.+|+|.|+|.+.|..+.....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .|.|++++..+
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~ 162 (434)
T 1igy_B 83 SSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 162 (434)
T ss_dssp CSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCS
T ss_pred CCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCC
Confidence 999999999999999886544445567777631 24333222223457899999999954334776 99999998753
Q ss_pred ccCCCeeEEe-----ccceeeeEEE---eeeEEEEeecCCCCCCccc-c--------------cccceeE--------Ee
Q psy15127 204 DLESSKSLDL-----SRRTLGWLRV---RPLYWNVARPRANLNPRYI-G--------------RKMASLL--------IW 252 (633)
Q Consensus 204 ~~~~~~~~~~-----~~~~~~~~~~---~g~y~C~a~~~~~~~p~~~-~--------------~~~~~~~--------~~ 252 (633)
.......... ....+.+... .|.|+|.|.|..+...... . ....... .+
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v 242 (434)
T 1igy_B 163 GVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTL 242 (434)
T ss_dssp SEEECCCEECSSCEEEEEEEEEETTTTTSSCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHH
T ss_pred CeEecCceecCCcEEEEEEEEEcchhcCCCcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhc
Confidence 2110000000 0011222211 1899999999877532100 0 0001111 15
Q ss_pred cCCceEEEEEEEeeec----CCeeEEEECCEEEEeccCCccceE---EEccCceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 253 NHPRVNRLSCFAEGSP----LPSVFWTQEGSQVLMFPGNAYGHL---HVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 253 ~~g~~~~l~C~~~g~p----~~~v~W~~~g~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
..|+.++|.|.+.|.+ .+.+.|+++|..+........... .....+.|.|..+..+|.|.|+|.|.|..|..
T Consensus 243 ~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 243 LITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp STTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred ccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 6789999999999984 358999999976532110000000 01123479999999999999999999988754
No 97
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=7.4e-22 Score=183.34 Aligned_cols=189 Identities=22% Similarity=0.371 Sum_probs=142.7
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccC------------CCCCeEEcccceEEEccCCCCCCeEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKM------------PTGRAKILDDRSLQIENVGPQDEGLY 138 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i------------~~~~~~~~~~~~L~i~~v~~~d~G~Y 138 (633)
|+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+|++..+ ....+....+..|.|.+++.+|+|.|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 356777888999999999999999998899999999988763 11222333448999999999999999
Q ss_pred EEEEEeCCc--eEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE-EeccCCCeeEEecc
Q psy15127 139 ICDVENLVG--SISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ-FIDLESSKSLDLSR 215 (633)
Q Consensus 139 ~C~~~n~~g--~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~-~~~~~~~~~~~~~~ 215 (633)
+|.+.+..| ..+..+.|.|..+ |.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++. .+..........
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~-- 157 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVP-PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAF-- 157 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBC-CCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSC--
T ss_pred EEEEEccCCCcccEEEEEEEEEcC-CCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccc--
Confidence 999999876 5678888999887 6655555556789999999999966889999999999987 554321110000
Q ss_pred ceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE-
Q psy15127 216 RTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV- 294 (633)
Q Consensus 216 ~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~- 294 (633)
...+...
T Consensus 158 ------------------------------------------------------------------------~~~~~~~~ 165 (212)
T 1f97_A 158 ------------------------------------------------------------------------MNSSFTID 165 (212)
T ss_dssp ------------------------------------------------------------------------SSSCEEEC
T ss_pred ------------------------------------------------------------------------cCceeEec
Confidence 0011111
Q ss_pred ccCceEEEcCCCCCCCeEEEEEEEeCCcee--EEEEEEEEEe
Q psy15127 295 TQEGTLRIQGVQKEDAGFFVCSALSVAGST--TVRAFLQVRE 334 (633)
Q Consensus 295 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~ 334 (633)
...+.|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.+
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred CCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 235689999999999999999999999988 4556666653
No 98
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.88 E-value=1.9e-21 Score=204.21 Aligned_cols=279 Identities=13% Similarity=0.082 Sum_probs=168.3
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEecC----------------------cCCeeeeCCCceEEEcCCeEE
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKEAL----------------------IKPFPISEPSDATVLSGSVVE 90 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~v~----------------------~~p~~~~~~~~~~~~~G~~~~ 90 (633)
.|+.+.. +.+|.|.+++. +|.|+|.+.+.. .+|.+...+.. .+.+|+.++
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~g~~v~ 145 (475)
T 1iga_A 67 GRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC-STQPDGNVV 145 (475)
T ss_pred CceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc-ccCCCCeEE
Confidence 4666543 24799999998 999999997621 12333222211 225899999
Q ss_pred EEEEEecc-CC-C-eEEEEeCCccCCCC--C-------eEEcccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEE
Q psy15127 91 FVCRVGGD-PL-P-TILWRRDDGKMPTG--R-------AKILDDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTV 157 (633)
Q Consensus 91 L~C~~~~~-p~-p-~i~W~~~~~~i~~~--~-------~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V 157 (633)
|.|.+.|. |. + .|.|++++...... . ......+.|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 146 L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V 225 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPV 225 (475)
T ss_pred EEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccc
Confidence 99999986 65 5 89999988543110 0 01111236889999999999999999998764 233344333
Q ss_pred Ee-----------------ecccc-ccCCCceEEecCCcEEEEEeCCCCCCC---CeEEEEECCEEeccCCCe-eEEe--
Q psy15127 158 HL-----------------LRDDF-RAEPKDTRVASGETALLECGPPKGQPE---PTLHWKKNGQFIDLESSK-SLDL-- 213 (633)
Q Consensus 158 ~~-----------------~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~---~~i~W~~~~~~~~~~~~~-~~~~-- 213 (633)
.. .+|.+ ...|....+.+|+.+.|.|.+ .|.++ +.|.| ++..+...... ....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~-~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~ 302 (475)
T 1iga_A 226 PSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTL-TGLRDASGVTFTW--TPSSGKSAVQGPPERDLC 302 (475)
T ss_pred ccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEE-EcccCCCceEEEE--CCCCcCCccccCceECCC
Confidence 11 11333 333333446899999999995 45433 69999 44433221110 0000
Q ss_pred ----ccceeeeE----EEeeeEEEEeecCCCCCCcc-cc-----cccceeE-------EecCCceEEEEEEEeeecC--C
Q psy15127 214 ----SRRTLGWL----RVRPLYWNVARPRANLNPRY-IG-----RKMASLL-------IWNHPRVNRLSCFAEGSPL--P 270 (633)
Q Consensus 214 ----~~~~~~~~----~~~g~y~C~a~~~~~~~p~~-~~-----~~~~~~~-------~~~~g~~~~l~C~~~g~p~--~ 270 (633)
....+.+. ...|.|+|.|.|..+..... .. ...+... .+..|+.+.|.|.+.|.++ +
T Consensus 303 g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~ 382 (475)
T 1iga_A 303 GCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDV 382 (475)
T ss_pred CCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCC
Confidence 11122222 22489999999987754210 00 1111111 1346788999999999744 4
Q ss_pred eeEEEECCEEEEeccCCccceEEEc---c------CceEEEcCCCCCCCeEEEEEEEeCCce
Q psy15127 271 SVFWTQEGSQVLMFPGNAYGHLHVT---Q------EGTLRIQGVQKEDAGFFVCSALSVAGS 323 (633)
Q Consensus 271 ~v~W~~~g~~~~~~~~~~~~~~~~~---~------~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 323 (633)
.|.|+++|..+..... ........ . .+.|.|.....+|.|.|+|.|.|....
T Consensus 383 ~v~W~k~g~~l~~~~~-~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 383 LVRWLQGSQELPREKY-LTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEECCEECCCCce-eecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 9999999987642110 00000111 1 235778888888999999999997543
No 99
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.88 E-value=6e-21 Score=188.16 Aligned_cols=269 Identities=17% Similarity=0.184 Sum_probs=179.3
Q ss_pred eEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccC--ceEEEcCCCCCCCeEEEEEEEeCCceeEE
Q psy15127 249 LLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE--GTLRIQGVQKEDAGFFVCSALSVAGSTTV 326 (633)
Q Consensus 249 ~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 326 (633)
...+..|+.++|.|.+.|.|.+.+.|+++|..+.... ...++....+ ..|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 13 ~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 90 (305)
T 2nzi_A 13 NLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSG 90 (305)
T ss_dssp CEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred ceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC--CeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccc
Confidence 4667889999999999999999999999998874211 1111222222 38999999999999999999999999888
Q ss_pred EEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCC
Q psy15127 327 RAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDS 406 (633)
Q Consensus 327 ~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~ 406 (633)
.+.|.|...+....+.....+.. ..+...+.-.+.|.+.
T Consensus 91 ~~~l~V~~~p~~~~~~~~~~~~~------------~~~~~g~~~~l~C~~~----------------------------- 129 (305)
T 2nzi_A 91 TASLEVEVPAKIHLPKTLEGMGA------------VHALRGEVVSIKIPFS----------------------------- 129 (305)
T ss_dssp EEEEEECEEEEECCCHHHHSSCC------------EEEETTCCEEEEEEEE-----------------------------
T ss_pred eEEEEEecCCccCCCcccccccc------------EEecCCCEEEEEEEEC-----------------------------
Confidence 88888875433222111000000 0111223334444431
Q ss_pred CCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEec-CCCCCeEEEE
Q psy15127 407 GLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSD-LKPDTSYMFI 485 (633)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~~~Y~~~ 485 (633)
......+.|...... +. ....... ........+.|.+ +.+.+.|.|+
T Consensus 130 ---------------g~p~p~i~W~~~~~~------~~----------~~~~~~~-~~~~~~~~l~i~~~~~~~d~G~Y~ 177 (305)
T 2nzi_A 130 ---------------GKPDPVITWQKGQDL------ID----------NNGHYQV-IVTRSFTSLVFPNGVERKDAGFYV 177 (305)
T ss_dssp ---------------EESCCEEEEEESSSB------CC----------SSSSCEE-EECSSEEEEEETTCCCSTTCEEEE
T ss_pred ---------------CCCCCEEEEEECCEE------CC----------CCCcEEE-EEcCCceEEEEecCCccCccEEEE
Confidence 111235667653321 10 0011110 1112345788888 9999999999
Q ss_pred EEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhh
Q psy15127 486 VRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARAR 565 (633)
Q Consensus 486 v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i 565 (633)
|.|.|..|....+.. ......|.+|... .+..+..+++.|+|.+| ..+++..+
T Consensus 178 C~a~N~~G~~~~~~~----l~v~~~P~~p~~~----------------~~~~~~~~~v~l~w~~p-------~~~g~~~i 230 (305)
T 2nzi_A 178 VCAKNRFGIDQKTVE----LDVADVPDPPRGV----------------KVSDVSRDSVNLTWTEP-------ASDGGSKI 230 (305)
T ss_dssp EEEEETTEEEEEEEE----EEEEBCCCCCEEE----------------EEESCCSSCEEEEEECC-------SCCSBSCE
T ss_pred EEEEeCCCceeeEEE----EEEecCCCCCCCc----------------eeeeccCCEEEEEEcCC-------ccCCCCce
Confidence 999999998754322 2233455555544 67778899999999954 12456689
Q ss_pred cceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 566 LGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 566 ~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
..| .++|+..... .|...... ....++|.+|.+++.|.|+++|.|..|.|.+|+
T Consensus 231 ~~y-~v~~~~~~~~-------~w~~~~~~------~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 231 TNY-IVEKCATTAE-------RWLRVGQA------RETRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp EEE-EEEEEETTSC-------CEEEEEEE------SSSEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred eEE-EEEEecCCCC-------ccEECccc------cCceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 999 9999887654 37654321 267899999999999999999999999999985
No 100
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.88 E-value=5e-22 Score=182.81 Aligned_cols=171 Identities=18% Similarity=0.250 Sum_probs=123.4
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCe-EEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPT-ILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~-i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
..+|.+...|....+.+|+.++|.|.+.+.|.+. +.|+|+|..+.... +.|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~------~~L~i~~v~~~D~G~Y~C~a~n~-- 76 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA------SSYFIDAATVDDSGEYRCQTQLS-- 76 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS------SEEEESSCCGGGCEEEEEEETTS--
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc------cEEEEecccccCCEEEEEEeCCC--
Confidence 3568888888888999999999999999888775 99999998876543 68999999999999999999874
Q ss_pred eEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeE
Q psy15127 148 SISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLY 227 (633)
Q Consensus 148 ~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 227 (633)
..+..+.|.|..+ |.+...+. ..+.+|+.+.|.|.+..+.|.+.+.|+++|.
T Consensus 77 ~~s~~~~l~V~~~-p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~-------------------------- 128 (204)
T 3sgj_C 77 TLSDPVQLEVHIG-WLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGK-------------------------- 128 (204)
T ss_dssp BCCCCEEEEEECS-SEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTE--------------------------
T ss_pred cccccEEEEEecC-ceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCc--------------------------
Confidence 3455677788766 44333333 4556666666666632333444555555544
Q ss_pred EEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCC
Q psy15127 228 WNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQK 307 (633)
Q Consensus 228 ~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 307 (633)
.+.. ...++.|.|.++..
T Consensus 129 ----------------------------------------------------~~~~----------~~~~~~L~i~~v~~ 146 (204)
T 3sgj_C 129 ----------------------------------------------------GRKY----------FHHNSDFYIPKATL 146 (204)
T ss_dssp ----------------------------------------------------EEEE----------EEECCCEEESSCCG
T ss_pred ----------------------------------------------------Eeec----------ccCCceEEECcCCc
Confidence 3310 11245899999999
Q ss_pred CCCeEEEEEEEeC-CceeEEEEEEEEEeccc
Q psy15127 308 EDAGFFVCSALSV-AGSTTVRAFLQVREFCV 337 (633)
Q Consensus 308 ~d~G~Y~C~a~n~-~g~~~~~~~l~v~~~~~ 337 (633)
+|+|.|+|.|.|. .+..+..+.|.|.+.+.
T Consensus 147 ~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 147 KDSGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred ccCEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 9999999999994 45556777888876433
No 101
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.88 E-value=5.2e-22 Score=187.31 Aligned_cols=185 Identities=17% Similarity=0.200 Sum_probs=146.4
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
++++|..+.+...+.+++.|+|+++. +.+.+|.|+|+..+...... .......+.++|.+|.|++.|.|+|+|
T Consensus 5 p~~~P~~l~~~~~~~~si~l~W~~p~------g~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 77 (234)
T 3f7q_A 5 DLGAPQNPNAKAAGSRKIHFNWLPPS------GKPMGYRVKYWIQGDSESEA-HLLDSKVPSVELTNLYPYCDYEMKVCA 77 (234)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECCS------SCCCEEEEEEEETTSCGGGC-EEEEESSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCcceEEEEcCCCEEEEEEECCC------CccceEEEEEEECCCCccce-EEEcCCccEEEECCCCCCCEEEEEEEE
Confidence 45678888888899999999999983 47899999999765433221 123346788999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.|+++... .++|....|.+|..+ ++..++.+++.|+|++| ...+|.|.+|
T Consensus 78 ~n~~G~g~~s~~~-~~~T~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y 132 (234)
T 3f7q_A 78 YGAQGEGPYSSLV-SCRTHQEVPSEPGRL----------------AFNVVSSTVTQLSWAEP--------AETNGEITAY 132 (234)
T ss_dssp EETTEECCCCCCE-EEECCCCCCCCCCCC----------------EEEECSSSCEEEECCCC--------SCCSSCCCEE
T ss_pred EeCCCcCCCCCeE-EEEcCCCCCCCCCcc----------------EEEEecCCEEEEEEcCC--------CCCCCceeEE
Confidence 9999999988766 577888888887776 78889999999999955 4567899999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEee-cCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVM-NAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|+|+..+..... ...|. .+. .....++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 133 -~v~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 190 (234)
T 3f7q_A 133 -EVCYGLVNDDNRP--IGPMK-----KVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPERE 190 (234)
T ss_dssp -EEEEEEBCTTSCB--SSCCE-----ECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEE
T ss_pred -EEEEEECCCCCCc--cCcce-----EEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcC
Confidence 9999987655410 01121 121 234568999999999999999999999999999873
No 102
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=178.88 Aligned_cols=184 Identities=26% Similarity=0.390 Sum_probs=146.1
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|++|..+.+.....+++.|+|.++.... +.++.+|.|+|+..+ ...|...........+++.+|.|++.|.|+|+|
T Consensus 5 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~--~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDG--GSKIKNYIVEKREST-RKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCT--TSCCCEEEEEEEETT-CSSCEEEEEEECSSEEEECCCCTTCEEEEEEEE
T ss_pred CCCCCCCcEEEEecCCEEEEEEcCCccCC--CCcccEEEEEEEECC-CCccEEeecCCCccEEEEcCCCCCCEEEEEEEE
Confidence 36678888888889999999999986442 456999999998765 345665555556789999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.|.++... ...+...+|.+|..+ .+...+.+++.|+|++| . ...++.+.+|
T Consensus 82 ~~~~g~~~~s~~~-~~~t~~~~p~~p~~~----------------~~~~~~~~~v~l~W~~p------~-~~~~~~i~~Y 137 (197)
T 3lpw_A 82 ENEYGIGLPAETA-ESVKASERPLPPGKI----------------TLMDVTRNSVSLSWEKP------E-HDGGSRILGY 137 (197)
T ss_dssp EETTEECCCEECS-SCEESCCCCCCCSCE----------------EEEEECSSCEEEEECCC------S-CCTTSCCCEE
T ss_pred EcCccccCCCCCc-cceecCCCCCCCccc----------------EEEeccCCeEEEEecCC------C-cCCCCcccEE
Confidence 9999999887665 355666667766665 77788899999999954 1 2234589999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|+|+..+... |... .....++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 138 -~v~~~~~~~~~-------~~~~------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~ 188 (197)
T 3lpw_A 138 -IVEMQTKGSDK-------WATC------ATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQ 188 (197)
T ss_dssp -EEEEEETTCSC-------CEEE------EEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEE
T ss_pred -EEEEEeCCCCc-------eEEe------ecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCcc
Confidence 99999876543 4432 123578899999999999999999999999999874
No 103
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.88 E-value=5.4e-21 Score=174.44 Aligned_cols=185 Identities=25% Similarity=0.427 Sum_probs=131.2
Q ss_pred cCCeeeeCCC--ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEc--ccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPS--DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKIL--DDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~--~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.+...+. ++.+.+|+.++|.|.+.+.|.+.+.|++++..+........ .+..|.|.+++.+|+|.|+|.+.+.
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 3677776554 46788999999999999999999999999998876533332 3457999999999999999999999
Q ss_pred CceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEee
Q psy15127 146 VGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRP 225 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 225 (633)
.+.....+.|.|..+ |.+...+ ...+.+|+.+.|.|. ..+.|.+.+.|++++.
T Consensus 81 ~~~~~~~~~l~V~~~-p~~~~~~-~~~~~~g~~v~l~C~-~~~~p~~~v~W~~~~~------------------------ 133 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQ-PHIIQLK-NETTYENGQVTLVCD-AEGEPIPEITWKRAVD------------------------ 133 (192)
T ss_dssp TEEEEEEEEEEEEEE-EEEEEEC-CEEECTTSEEEEEEE-EEEESCCEEEEEETTT------------------------
T ss_pred ccccceEEEEEEEcc-CcccccC-cceEEeCCeEEEEEE-ecCCCCCcEEEEeCCC------------------------
Confidence 998888888988876 5443322 234455666666666 3555555666665521
Q ss_pred eEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE---ccCceEEE
Q psy15127 226 LYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV---TQEGTLRI 302 (633)
Q Consensus 226 ~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~---~~~~~l~i 302 (633)
+..+.........++.. .....|.|
T Consensus 134 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~L~i 161 (192)
T 2va4_A 134 ----------------------------------------------------GFTFTEGDKSLDGRIEVKGQHGSSSLHI 161 (192)
T ss_dssp ----------------------------------------------------TEEECTTCBCTTSCEEEEEETTEEEEEE
T ss_pred ----------------------------------------------------CceeeccccccCCcEEEeeccCceEEEE
Confidence 21111000000111111 12357999
Q ss_pred cCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 303 QGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 303 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.++..+|.|.|+|.|.|..|..+.++.|.|+
T Consensus 162 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 162 KDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp ESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999888888763
No 104
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=1.5e-22 Score=185.34 Aligned_cols=120 Identities=15% Similarity=0.225 Sum_probs=88.7
Q ss_pred ceEEEcCCeEEEEEE---EeccCCCeEEEEeCCccCCC------------------CCeEE---cccceEEEccCCCCCC
Q psy15127 80 DATVLSGSVVEFVCR---VGGDPLPTILWRRDDGKMPT------------------GRAKI---LDDRSLQIENVGPQDE 135 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~---~~~~p~p~i~W~~~~~~i~~------------------~~~~~---~~~~~L~i~~v~~~d~ 135 (633)
++.+..|+.++|.|. +.+.|.+.|+|+|+|..+.. ++... .....|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 567899999999996 45778999999998764421 11111 1234799999999999
Q ss_pred eEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 136 GLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 136 G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
|.|+|.|.|..|..+..+.|.|..| |.+...+....+.+|+.+.|.|. +.|.|.|.|.|++++.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p-~~~~~~~~~~~v~~g~~~~l~C~-~~G~P~P~v~W~~~~~ 145 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKP-LTLSVHSERSQFPDFSVLTVTCT-VNAFPHPHVQWLMPEG 145 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEE-EEEEEEEEECCSSCSCCEEEEEE-EEEESCCEEEECCC--
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCC-ceeeecceeEEEcCCCEEEEEEE-cCCCCCCEEEEEECCe
Confidence 9999999999999999999999887 66666666666666777777776 3556666666655443
No 105
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.88 E-value=3.8e-22 Score=197.45 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=153.7
Q ss_pred cCCCCCCCCCCccccccceeeEEEEecccCCCCCceEEeeC---ceEEEcCCCC--CCeEEEEEEe-----------cCc
Q psy15127 7 TNHAHPMSSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFG---SVLGARGALS--DDQWKLIAKE-----------ALI 70 (633)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~-----------v~~ 70 (633)
+.+.+..+.|.+.|+| ..+|.+...+.|+.+... ..|.|.+++. +|.|+|.|.| +..
T Consensus 21 l~~~~~~~~p~~~v~W-------~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~ 93 (312)
T 2y23_A 21 LNFECDKMTPKSEFSW-------SKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEE 93 (312)
T ss_dssp EEEECSSCCTTCCEEE-------EETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHH
T ss_pred EEEEEeCCCCCcEEEE-------EECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEee
Confidence 3444446678888884 446666666777777654 3899999998 9999999987 111
Q ss_pred ------------CCeeeeCCC-ceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCC-CeEEccc-----ceEEEccC
Q psy15127 71 ------------KPFPISEPS-DATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTG-RAKILDD-----RSLQIENV 130 (633)
Q Consensus 71 ------------~p~~~~~~~-~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~-~~~~~~~-----~~L~i~~v 130 (633)
+|.+...+. ...+.+|+.+.|.|.+. +.|.+.++|++++..+..+ +..+..+ ..|.|.++
T Consensus 94 ~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~ 173 (312)
T 2y23_A 94 LKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKL 173 (312)
T ss_dssp HHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCC
T ss_pred eeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccC
Confidence 555544443 77899999999999998 8899999999999988654 3333322 24999999
Q ss_pred CCCCCeEEEEEEEeCCceEEEEEEEEEEe--------------------eccccccCCCceEEecCCcEEEEEeCCCCCC
Q psy15127 131 GPQDEGLYICDVENLVGSISLRASLTVHL--------------------LRDDFRAEPKDTRVASGETALLECGPPKGQP 190 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~--------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 190 (633)
+.+|+|.|+|.+.+..... ...+.+.. .+|.+.. +....+.+|+.+.|.|. ..+.|
T Consensus 174 ~~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~G~~~~l~C~-~~~~p 249 (312)
T 2y23_A 174 QDEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKCK-VANIK 249 (312)
T ss_dssp CGGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE-EEEEEEETTTEEEEEEE-EESCC
T ss_pred CcccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceee-cceEEEeCCCEEEEEEE-EcCCC
Confidence 9999999999998754443 33333311 1122221 12357889999999999 57888
Q ss_pred CC-eEEEEECCEEeccCCCeeEEeccceeeeEEE----eeeEEEEeecCCCCC
Q psy15127 191 EP-TLHWKKNGQFIDLESSKSLDLSRRTLGWLRV----RPLYWNVARPRANLN 238 (633)
Q Consensus 191 ~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~y~C~a~~~~~~~ 238 (633)
.+ .+.|++++..+.......+......|.+..+ .|.|+|.|.|..+..
T Consensus 250 ~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 302 (312)
T 2y23_A 250 KETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKD 302 (312)
T ss_dssp SSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCE
T ss_pred CCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCce
Confidence 77 9999999999875433322211123332222 489999999998743
No 106
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.88 E-value=4.2e-22 Score=198.60 Aligned_cols=212 Identities=17% Similarity=0.136 Sum_probs=147.0
Q ss_pred CCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CC-eEEEEEEe-------------cCcCCeeeeCC
Q psy15127 15 SPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DD-QWKLIAKE-------------ALIKPFPISEP 78 (633)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G-~Y~C~a~~-------------v~~~p~~~~~~ 78 (633)
+|.+.|+|+. +|.+.....+. ..+++|.|.+++. +| .|+|.|.| +..+|.+...+
T Consensus 65 ~p~~~v~W~k-------~~~~~~~~~~~--~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~ 135 (329)
T 3oq3_B 65 DKDNVVNWEK-------IGKTRRPLNRR--VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPET 135 (329)
T ss_dssp CTTCEEEEEE-------CSSSCEECSTT--EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEE
T ss_pred CCCCeeEEEE-------CCCCccccCce--eecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccc
Confidence 4666788544 33333222333 4578999999998 99 99999998 12233333333
Q ss_pred CceEEEcCCeEEEEEEEeccC-CCeEEEEeCCccCCC-CCeEEcccceEEEccCCCCCCeEEEEEEEeC--Cce----EE
Q psy15127 79 SDATVLSGSVVEFVCRVGGDP-LPTILWRRDDGKMPT-GRAKILDDRSLQIENVGPQDEGLYICDVENL--VGS----IS 150 (633)
Q Consensus 79 ~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~~~~~i~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~--~g~----~s 150 (633)
....+.+|+.+.|.|.+.+.| .+.++|+|++..+.. +......++.|.|.+++.+|+|.|+|.|.|. .|. .+
T Consensus 136 ~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s 215 (329)
T 3oq3_B 136 YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVS 215 (329)
T ss_dssp EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEE
T ss_pred cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEE
Confidence 333456799999999999999 899999999998853 2233333689999999999999999999986 544 34
Q ss_pred EEEEEEEEeecc---ccccCCCceEEecCCcEEEEEeCCCCCC---CC-eEEEEECCEEeccCCCeeEEe-------ccc
Q psy15127 151 LRASLTVHLLRD---DFRAEPKDTRVASGETALLECGPPKGQP---EP-TLHWKKNGQFIDLESSKSLDL-------SRR 216 (633)
Q Consensus 151 ~~~~l~V~~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~~p---~~-~i~W~~~~~~~~~~~~~~~~~-------~~~ 216 (633)
..+.|.|..++. .+. .+....+.+|+.+.|.|. +.+.| .+ .+.|+++|..+.......... ...
T Consensus 216 ~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~-~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~ 293 (329)
T 3oq3_B 216 RCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCT-AVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEA 293 (329)
T ss_dssp EEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEE-EEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEE
T ss_pred eeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEE-EEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEe
Confidence 457788887631 222 666788999999999999 56666 67 899999998753322211111 112
Q ss_pred eeeeEEE----ee-eEEEEeecCCCC
Q psy15127 217 TLGWLRV----RP-LYWNVARPRANL 237 (633)
Q Consensus 217 ~~~~~~~----~g-~y~C~a~~~~~~ 237 (633)
.|.+..+ .| .|+|.|.|..+.
T Consensus 294 ~L~I~~v~~~D~G~~Y~C~a~N~~G~ 319 (329)
T 3oq3_B 294 TLYFENVTEEYIGNTYTCRGHNYYFD 319 (329)
T ss_dssp EEEESSCCGGGTTCEEEEEEECSSCE
T ss_pred EEEEEeccHHHCCCcEEEEEEecCCc
Confidence 2222222 38 999999998774
No 107
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.87 E-value=1.1e-22 Score=204.31 Aligned_cols=244 Identities=16% Similarity=0.227 Sum_probs=153.0
Q ss_pred eCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeC--CccC------------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRD--DGKM------------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~--~~~i------------------~~~~~~~~~-----~~~L~i~ 128 (633)
..|..+.+.+|++++|.|.+.+. +.+.|.|+|+ +..+ ..++..+.. ..+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 45667889999999999999876 3678999996 3322 123444432 2489999
Q ss_pred cCCCCCCeEEEEEEEeCCceEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEec
Q psy15127 129 NVGPQDEGLYICDVENLVGSISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFID 204 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~ 204 (633)
+++.+|+|.|+|.|.|..+.....+.|.|... +|.+...+....+.+|+.+.|.|.+....|. +.|.|+++|..+.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 99999999999999986655555677888742 2333333323345789999999995433465 7999999987532
Q ss_pred cCCCeeEEecc------ceeeeEEE---eeeEEEEeecCCCCCCc---c------------------------cccccce
Q psy15127 205 LESSKSLDLSR------RTLGWLRV---RPLYWNVARPRANLNPR---Y------------------------IGRKMAS 248 (633)
Q Consensus 205 ~~~~~~~~~~~------~~~~~~~~---~g~y~C~a~~~~~~~p~---~------------------------~~~~~~~ 248 (633)
........... ..+.+... .|.|+|.|.|..+.... + .....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~ 244 (344)
T 1za6_B 165 VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQ 244 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEEETTHHHHBCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCE
T ss_pred eeECCCeECCCCCEEEEEEEEEcHHHcCCCcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCE
Confidence 11000000011 12222211 28999999987663110 0 0001111
Q ss_pred eEEe------cCCceEEEEEEEeeecC--CeeEEEECCEEEEeccCCccceEEEccCc------eEEEcCCCCCCCeEEE
Q psy15127 249 LLIW------NHPRVNRLSCFAEGSPL--PSVFWTQEGSQVLMFPGNAYGHLHVTQEG------TLRIQGVQKEDAGFFV 314 (633)
Q Consensus 249 ~~~~------~~g~~~~l~C~~~g~p~--~~v~W~~~g~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~d~G~Y~ 314 (633)
..+. ..|+.++|.|.+.|.++ +.+.|+++|..+.... ..+.....++ .|.|.....+|.|.|+
T Consensus 245 v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~---~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~Yt 321 (344)
T 1za6_B 245 VYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK---TTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFS 321 (344)
T ss_dssp EEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEE---ECCCEECTTSCEEEEEEEEECHHHHHTTCEEE
T ss_pred EEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcE---ecceEECCCCcEEEEEEEEEChHHccCCCeEE
Confidence 1111 13566999999999644 5899999998663110 0111122232 3566666667799999
Q ss_pred EEEEeCCc
Q psy15127 315 CSALSVAG 322 (633)
Q Consensus 315 C~a~n~~g 322 (633)
|.|.|...
T Consensus 322 C~a~~~~l 329 (344)
T 1za6_B 322 CSVMHEAL 329 (344)
T ss_dssp EEEECTTS
T ss_pred EEEEcCCC
Confidence 99999754
No 108
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=2.3e-21 Score=182.63 Aligned_cols=198 Identities=24% Similarity=0.403 Sum_probs=147.0
Q ss_pred cCcCCeeeeCC----CceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC-----eEEcccceEEEccCCCCCCeEE
Q psy15127 68 ALIKPFPISEP----SDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR-----AKILDDRSLQIENVGPQDEGLY 138 (633)
Q Consensus 68 v~~~p~~~~~~----~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~-----~~~~~~~~L~i~~v~~~d~G~Y 138 (633)
...+|.|...+ ....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... ........|.|.+++.+|+|.|
T Consensus 12 ~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 91 (231)
T 3ojm_B 12 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNY 91 (231)
T ss_dssp -CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred CccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEE
Confidence 34567776555 77889999999999999999999999999999875321 2333456899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEeec---cccc-cCCCceEEecCCcEEEEEeCCCCCCCCeEEEEE----CCEEeccCCCee
Q psy15127 139 ICDVENLVGSISLRASLTVHLLR---DDFR-AEPKDTRVASGETALLECGPPKGQPEPTLHWKK----NGQFIDLESSKS 210 (633)
Q Consensus 139 ~C~~~n~~g~~s~~~~l~V~~~~---p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~----~~~~~~~~~~~~ 210 (633)
+|.+.|..+.....+.|.|...+ |.+. ..+....+.+|+.+.|.|. ..+.|.+.+.|++ +|..+.......
T Consensus 92 ~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~p~v~W~~~~~~~g~~~~~~~~~~ 170 (231)
T 3ojm_B 92 TCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCK-VYSDAQPHIQWIKHVEKNGSKYGPDGLPY 170 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECC-EECSSCCEEEEEEECCBTTBSBCTTSCBC
T ss_pred EEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEE-EecCCCCEEEEEECCCCCCccccCCCcce
Confidence 99999999998888899998642 2222 2356678899999999999 5788889999998 555443221111
Q ss_pred EEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccc
Q psy15127 211 LDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYG 290 (633)
Q Consensus 211 ~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~ 290 (633)
... ... .
T Consensus 171 ~~~------------------------------------------------------------~~~-------------~ 177 (231)
T 3ojm_B 171 LKV------------------------------------------------------------LKH-------------S 177 (231)
T ss_dssp EEE------------------------------------------------------------EEE-------------C
T ss_pred EeE------------------------------------------------------------ecc-------------c
Confidence 000 000 0
Q ss_pred eEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCC
Q psy15127 291 HLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLP 339 (633)
Q Consensus 291 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p 339 (633)
.......+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|...+..|
T Consensus 178 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 178 GINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226 (231)
T ss_dssp STTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred ccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCC
Confidence 0011134579999999999999999999999999999999998765544
No 109
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=2.8e-21 Score=174.77 Aligned_cols=131 Identities=31% Similarity=0.430 Sum_probs=99.1
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc------cceEEEccCCCCCCeEEEEEEEe
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD------DRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
+|.|...|..+.+.+|+.+.|.|.+.+.|.+.+.|+|++..+......... .+.|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 577888899999999999999999999999999999999988765322221 25899999999999999999999
Q ss_pred CCce-EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEe
Q psy15127 145 LVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFI 203 (633)
Q Consensus 145 ~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 203 (633)
..+. .+..+.|.|..+ |.+...+....+.+|+.+.|.|. ..+.|.+ .+.|++++..+
T Consensus 82 ~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~~v~W~~~~~~~ 140 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGV-PFFTVEPKDLAVPPNAPFQLSCE-AVGPPEPVTIVWWRGTTKI 140 (182)
T ss_dssp CTTCEECCCEEEEEECS-CEEEECCCCEEECTTCCEEEEEE-EECSSSCCEEEEEETTEEC
T ss_pred CCCcEEEEEEEEEEecC-CeEEecCcceEecCCCEEEEEeE-ecCCCCCCEEEEEcCCeEC
Confidence 8765 567888999887 77776676667777777777777 3555555 66666655433
No 110
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=3e-21 Score=180.10 Aligned_cols=191 Identities=21% Similarity=0.350 Sum_probs=132.7
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
..+.|...|..+.+.+|+.+.|.|.+.+.|.+.+.|+|++..+... .+..|.|.+++.+|+|.|+|.+.|..+..
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~ 91 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-----NTSELIFNAVHVKDAGFYVCRVNNNFTFE 91 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-----CSSEEEETTCCGGGCEEEEEEEECTTCCE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-----CCCEEEEccCChhhCeEeEEEEEcCCCCc
Confidence 4578889999999999999999999999999999999999988654 24689999999999999999999987753
Q ss_pred -EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEE
Q psy15127 150 -SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYW 228 (633)
Q Consensus 150 -s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 228 (633)
+..+.|.|...+..+...... + ....+.+.-.
T Consensus 92 ~s~~~~l~V~~~~~~~~~~~~~--~--------------~~~~p~~~~~------------------------------- 124 (218)
T 3k0w_A 92 FSQWSQLDVCDIPESFQRSVDG--V--------------SESKLQICVE------------------------------- 124 (218)
T ss_dssp ECCCEEEEEECCCGGGCTTCCS--B--------------CCSSCEEEEC-------------------------------
T ss_pred eeeEEEEEEEccCccccccccc--c--------------cCCCceEEEC-------------------------------
Confidence 666788887762221100000 0 0000111100
Q ss_pred EEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCC
Q psy15127 229 NVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKE 308 (633)
Q Consensus 229 C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 308 (633)
.....+..|+.+.|.|.+.|.|.+.+.|+++|..+.. .....|.|.++..+
T Consensus 125 ------------------~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~-----------~~~~~L~i~~v~~~ 175 (218)
T 3k0w_A 125 ------------------PTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTH-----------ETKKLYMVPYVDLE 175 (218)
T ss_dssp ------------------CCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTT-----------CCSSEEEESSCCGG
T ss_pred ------------------CCceeecCCCcEEEEEEecccCCCeEEEEECCEECCC-----------CCCCEEEEeecChh
Confidence 0011233457777778787888888888888776531 12347999999999
Q ss_pred CCeEEEEEEEeCCce-eEEEEEEEEEecccCCCc
Q psy15127 309 DAGFFVCSALSVAGS-TTVRAFLQVREFCVLPKG 341 (633)
Q Consensus 309 d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~p~p 341 (633)
|.|.|+|.|.|..|. .+..+.|.|.+...+..|
T Consensus 176 d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~~~P 209 (218)
T 3k0w_A 176 HQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGHP 209 (218)
T ss_dssp GCEEEEEEEECSSCEEECCCEEEEECC-------
T ss_pred cCEEEEEEEEcCCCCceeeeEEEEEeCCccCCCC
Confidence 999999999999887 566777877764444343
No 111
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=2.9e-21 Score=183.36 Aligned_cols=201 Identities=24% Similarity=0.393 Sum_probs=142.2
Q ss_pred cCCeeeeC----CCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-----CeEEcccceEEEccCCCCCCeEEEE
Q psy15127 70 IKPFPISE----PSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-----RAKILDDRSLQIENVGPQDEGLYIC 140 (633)
Q Consensus 70 ~~p~~~~~----~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-----~~~~~~~~~L~i~~v~~~d~G~Y~C 140 (633)
.+|.|+.. +..+.+.+|+.+.|.|.+.+.|.+.+.|+|++..+... .........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35666533 44678999999999999999999999999999987532 1233445789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEeecc---c-cccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEE----CCEEeccCCCeeEE
Q psy15127 141 DVENLVGSISLRASLTVHLLRD---D-FRAEPKDTRVASGETALLECGPPKGQPEPTLHWKK----NGQFIDLESSKSLD 212 (633)
Q Consensus 141 ~~~n~~g~~s~~~~l~V~~~~p---~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~----~~~~~~~~~~~~~~ 212 (633)
.+.|..+..+..+.|.|....+ . ....+....+.+|+.+.|.|. ..+.|.+.+.|++ ++..+.........
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~-~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCK-VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEE-EECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEE-EecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 9999999888888999886422 2 223456677889999999999 5888999999999 66544322211110
Q ss_pred eccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceE
Q psy15127 213 LSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHL 292 (633)
Q Consensus 213 ~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 292 (633)
... .+...
T Consensus 169 ~~~---------------------------------------------------------~~~~~--------------- 176 (241)
T 3grw_A 169 VLK---------------------------------------------------------SWISE--------------- 176 (241)
T ss_dssp EEE---------------------------------------------------------EEECS---------------
T ss_pred eee---------------------------------------------------------Eeeee---------------
Confidence 000 00000
Q ss_pred EEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCceE
Q psy15127 293 HVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTF 343 (633)
Q Consensus 293 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~ 343 (633)
.....+.|.|.++..+|.|.|+|.|.|..|..+.++.|.|...+..+...+
T Consensus 177 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~v 227 (241)
T 3grw_A 177 SVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELV 227 (241)
T ss_dssp BSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----------
T ss_pred ecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccce
Confidence 001234799999999999999999999999999999999987665554433
No 112
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=1.5e-21 Score=179.85 Aligned_cols=174 Identities=18% Similarity=0.232 Sum_probs=113.1
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCC-CeEEccc-----ceEEEccCCCCCCeEEEEEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTG-RAKILDD-----RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~-~~~~~~~-----~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.|+|.... +..+.+|+.+.|.|.+. +.|.|.|+|+|||.++..+ +..+..+ ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 46665543 67899999999999996 4799999999999998654 3333222 269999999999999999999
Q ss_pred eCCceEEEEEEEEEEee--------------------ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEe
Q psy15127 144 NLVGSISLRASLTVHLL--------------------RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFI 203 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~--------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~ 203 (633)
| |..+....+.+... +|.+...+ ...+.+|+.+.|.|.
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~------------------- 139 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCK------------------- 139 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEE-------------------
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEE-------------------
Confidence 9 44444444332110 12222211 233444555555554
Q ss_pred ccCCCeeEEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeee-cCCeeEEEECCEEEE
Q psy15127 204 DLESSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGS-PLPSVFWTQEGSQVL 282 (633)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~v~W~~~g~~~~ 282 (633)
+.|. |.|.+.|+|+|..+.
T Consensus 140 ------------------------------------------------------------v~g~~P~p~i~W~k~g~~l~ 159 (207)
T 3rbs_A 140 ------------------------------------------------------------VANIKKETHIVWYKDEREIS 159 (207)
T ss_dssp ------------------------------------------------------------EESCCTTCEEEEEETTEEEC
T ss_pred ------------------------------------------------------------EeCCCCCCEEEEEECCEECC
Confidence 4444 445555555554442
Q ss_pred eccCCccceEEE-ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy15127 283 MFPGNAYGHLHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 332 (633)
Q Consensus 283 ~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 332 (633)
.. .++.. ....+|.|.++..+|+|.|+|.|.|..|..+.++.|..
T Consensus 160 ~~-----~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 160 VD-----EKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CC-----CCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CC-----CceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 10 01111 12236999999999999999999999999999888754
No 113
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.86 E-value=2.3e-22 Score=199.92 Aligned_cols=236 Identities=15% Similarity=0.177 Sum_probs=145.7
Q ss_pred CeEEEEEEEecc-C-CCeEEEEeCCccCCCCCe---EEccc------ceEEEccCCCCCCeEEEEEEEeCCceEEEEEEE
Q psy15127 87 SVVEFVCRVGGD-P-LPTILWRRDDGKMPTGRA---KILDD------RSLQIENVGPQDEGLYICDVENLVGSISLRASL 155 (633)
Q Consensus 87 ~~~~L~C~~~~~-p-~p~i~W~~~~~~i~~~~~---~~~~~------~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l 155 (633)
+.+.|.|.+.+. | .+.|+|+|+|..+..+.. ....+ +.|.|.++..+|+|.|+|.|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999875 4 468999999998864321 11112 357888888889999999999988765544332
Q ss_pred EEEe--eccc-cccCCCceEEecCCcEEEEEeCCCCCCCC---eEEEEECC-EEeccCCCeeEEecc------ceeeeEE
Q psy15127 156 TVHL--LRDD-FRAEPKDTRVASGETALLECGPPKGQPEP---TLHWKKNG-QFIDLESSKSLDLSR------RTLGWLR 222 (633)
Q Consensus 156 ~V~~--~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~---~i~W~~~~-~~~~~~~~~~~~~~~------~~~~~~~ 222 (633)
.+.. ..|. +...|....+.+|+++.|.|.+....|.+ .|.|++++ ..+............ ..|.+..
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~ 184 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGT 184 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCH
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECH
Confidence 1111 1122 23445555678899999999954445666 99999975 433221111100111 1122221
Q ss_pred ----EeeeEEEEeecCCCCCC-ccccc------ccceeEEe------cCCceEEEEEEEeeecC-C-eeEEEECCEEEEe
Q psy15127 223 ----VRPLYWNVARPRANLNP-RYIGR------KMASLLIW------NHPRVNRLSCFAEGSPL-P-SVFWTQEGSQVLM 283 (633)
Q Consensus 223 ----~~g~y~C~a~~~~~~~p-~~~~~------~~~~~~~~------~~g~~~~l~C~~~g~p~-~-~v~W~~~g~~~~~ 283 (633)
..|.|+|.|.|...... ..... ..+...+. ..|+.++|.|.+.|.++ + .+.|+++|..+..
T Consensus 185 ~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 264 (323)
T 2wqr_A 185 RDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPD 264 (323)
T ss_dssp HHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred HHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCC
Confidence 13799999999863221 11110 11111111 12899999999999544 3 8999999987642
Q ss_pred ccCCccceEEEc------cCceEEEcCCCCCCCeEEEEEEEeCCce
Q psy15127 284 FPGNAYGHLHVT------QEGTLRIQGVQKEDAGFFVCSALSVAGS 323 (633)
Q Consensus 284 ~~~~~~~~~~~~------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 323 (633)
... ........ ..+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 265 ~~~-~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 265 ARH-STTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp GGE-EECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred Cce-eecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 100 00000111 1236999999999999999999998765
No 114
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.86 E-value=1.2e-20 Score=184.57 Aligned_cols=214 Identities=14% Similarity=0.146 Sum_probs=156.2
Q ss_pred EecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCC
Q psy15127 361 ACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGV 440 (633)
Q Consensus 361 i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~ 440 (633)
+..+.....|.+++.|.|..|....+ .+.+..... ..+.++..+..... .+++.|+|.++. .
T Consensus 65 ~~~l~p~t~Y~~~V~A~n~~G~s~~s-~~~~~~~~~-----------~~~~p~~~~~~~~~-~~si~l~W~~p~-----~ 126 (290)
T 3l5i_A 65 LTVNLTNDRYLATLTVRNLVGKSDAA-VLTIPACDF-----------QATHPVMDLKAFPK-DNMLWVEWTTPR-----E 126 (290)
T ss_dssp EEEEECSSCEEEEEEEEESSCBCCCE-EEEECCTTC-----------CCCCCCEEEEEEEE-TTEEEEEEECCS-----S
T ss_pred EEEEcCCceEEEEEEEEcCCCCCCCc-eEEeecccc-----------cCCCccceeEEEeC-CCeEEEEEeCCC-----C
Confidence 34555678899999999999976433 222222100 11233334444444 479999999987 2
Q ss_pred cceeEEEEEEEEecCCC----CeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcc
Q psy15127 441 APVIGYTVEYFSSDLQT----GWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQH 516 (633)
Q Consensus 441 ~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~ 516 (633)
.+.+|.|+|+..+... .|... .......+.+.+|.|++.|.|+|+|.|..|.|... .. ...|....|..++.
T Consensus 127 -~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~-~~-~~~t~~~~P~~~p~ 202 (290)
T 3l5i_A 127 -SVKKYILEWCVLSDKAPCITDWQQE-DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SI-KAYLKQAPPSKGPT 202 (290)
T ss_dssp -CCCEEEEEEEEECSSSCCCCEEEEE-ETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCE-EE-EEESSCCCCSSCCC
T ss_pred -CCCcEEEEEEECCCCCCCCcCeEEc-cCCCcceEEecCcCCccEEEEEEEEEeCCcccccE-EE-EeEccccCCCCCCe
Confidence 7899999999875442 35433 23345678889999999999999999999999842 22 35677777877777
Q ss_pred hHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEe
Q psy15127 517 LLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATV 596 (633)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~ 596 (633)
+ .+..++.+++.|+|++| | ....+|.|++| .|+|+..+... . .+
T Consensus 203 ~----------------~~~~~~~~sv~l~W~~~----~--~~~~~g~i~~Y-~v~~~~~~~~~--------~-----~~ 246 (290)
T 3l5i_A 203 V----------------RTKKVGKNEAVLEWDQL----P--VDVQNGFIRNY-TIFYRTIIGNE--------T-----AV 246 (290)
T ss_dssp E----------------EEEEECSSCEEEEECCC----C--HHHHSSCCCEE-EEEEEETTSCC--------E-----EE
T ss_pred e----------------eEeeccCCEEEEEEcCC----C--hhccCCEEEEE-EEEEEeCCCCe--------E-----EE
Confidence 6 67888999999999932 2 25678999999 99999875432 2 22
Q ss_pred ecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 597 MNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 597 ~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
...+..++++|.+|++++.|.|+|+|.|.+| |++|.
T Consensus 247 ~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~ 282 (290)
T 3l5i_A 247 NVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGP 282 (290)
T ss_dssp EEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECC
T ss_pred EeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCC
Confidence 2456788999999999999999999999999 77763
No 115
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.86 E-value=3.4e-19 Score=181.13 Aligned_cols=269 Identities=12% Similarity=0.102 Sum_probs=192.1
Q ss_pred cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCc-------------eEEeCCCcc--c---------
Q psy15127 296 QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKG-------------TFTLGQPNL--A--------- 351 (633)
Q Consensus 296 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p-------------~~~~~~~~~--~--------- 351 (633)
....+.|.++.......|...|.|..|........... ..|.| .+.|.+... .
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~---~~p~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~ 133 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP---EVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVA 133 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC---CCCCCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEE
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC---CCCCCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEE
Confidence 34578899999888888888888887754333222222 22222 244544321 0
Q ss_pred cCC-----------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEE
Q psy15127 352 TGN-----------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILN 420 (633)
Q Consensus 352 ~g~-----------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~ 420 (633)
.+. ....+.+.+|.....|.|++.|.|..|....... ..... +.+|..+.+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~-~~~t~---------------~~~p~~l~~~~ 197 (375)
T 3t1w_A 134 AGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL-TQQTA---------------VPPPTDLRFTN 197 (375)
T ss_dssp SSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEE-EEECC---------------CCCCEEEEEES
T ss_pred CCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeee-eeecC---------------CCCCceeEEEe
Confidence 011 1234478899999999999999999986543332 22211 23466677777
Q ss_pred eeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCC
Q psy15127 421 TTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPV 500 (633)
Q Consensus 421 ~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~ 500 (633)
...+++.|+|.++. ++.+.+|.|+|+..+....|...........++|.+|.|++.|.|+|+|.|..|.|.++..
T Consensus 198 ~~~~si~l~W~~p~-----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~ 272 (375)
T 3t1w_A 198 IGPDTMRVTWAPPP-----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG 272 (375)
T ss_dssp CCSSCEEEEEECCS-----SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred cccCEEEEEEcCCC-----CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceee
Confidence 78899999999985 3678999999998775556665555555689999999999999999999999999876532
Q ss_pred CCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCc
Q psy15127 501 SPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTA 580 (633)
Q Consensus 501 ~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~ 580 (633)
. ..| .|.+|..+ .+..++.+++.|+|++| .+.+.+| .|+|+..+...
T Consensus 273 ~--~~t---~p~~P~~l----------------~~~~~~~~sv~l~W~~p-----------~~~~~~Y-~v~~~~~~~~~ 319 (375)
T 3t1w_A 273 R--QKT---GLDSPTGI----------------DFSDITANSFTVHWIAP-----------RATITGY-RIRHHPEHFSG 319 (375)
T ss_dssp E--EEC---CCCCCEEE----------------EEESCCSSCEEEEEECC-----------SSCCSEE-EEEEEETTCCS
T ss_pred E--Eec---CCCCCCcc----------------EeeeccCCEEEEEECCC-----------CcceeeE-EEEEEECCCCC
Confidence 2 333 34445544 67788899999999943 3789999 99999876522
Q ss_pred ccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 581 STAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 581 ~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.|. ........++++|.+|+|++.|.|+|+|.|..|+|+|.
T Consensus 320 ------~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~ 360 (375)
T 3t1w_A 320 ------RPR-----EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL 360 (375)
T ss_dssp ------SCE-----EEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred ------cce-----eEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCce
Confidence 121 22344668899999999999999999999999999984
No 116
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=7.2e-22 Score=197.55 Aligned_cols=225 Identities=20% Similarity=0.277 Sum_probs=121.3
Q ss_pred cccCCCCCCCCCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe-----------cCc-
Q psy15127 5 LDTNHAHPMSSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE-----------ALI- 70 (633)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-----------v~~- 70 (633)
+.+.|......|.+.|+|+. +|.+...+.++.+ .+++|.|.+++. +|.|+|.|.| +..
T Consensus 26 v~l~C~~~~~~p~~~v~W~k-------~g~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~V~~~ 97 (334)
T 1ry7_B 26 VELSCPPPGGGPMGPTVWVK-------DGTGLVPSERVLV-GPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDA 97 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEeeCCCCCCCcceEEEE-------CCeeCCCcccEEe-ccceEEEeecccccCEEEEEEEEeCCeEEEEEEEEEecc
Confidence 44555555444667888554 3444444455544 457899999998 9999999987 211
Q ss_pred ---------------------CCeeeeC----CCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe-----EEc
Q psy15127 71 ---------------------KPFPISE----PSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA-----KIL 120 (633)
Q Consensus 71 ---------------------~p~~~~~----~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~-----~~~ 120 (633)
+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|+|++..+..... ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 177 (334)
T 1ry7_B 98 PSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH 177 (334)
T ss_dssp ---------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCT
T ss_pred CccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceeccc
Confidence 3443322 1236788999999999999999999999999988764321 112
Q ss_pred ccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeec---ccccc-CCCceEEecCCcEEEEEeCCCCCCCCeEEE
Q psy15127 121 DDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLR---DDFRA-EPKDTRVASGETALLECGPPKGQPEPTLHW 196 (633)
Q Consensus 121 ~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~---p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W 196 (633)
....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+ |.+.. .+....+.+|+.+.|.|. ..+.|.+.+.|
T Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~-~~g~p~p~v~W 256 (334)
T 1ry7_B 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCK-VYSDAQPHIQW 256 (334)
T ss_dssp TTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCC-CBCSSCEEEEE
T ss_pred ceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEE-EecCCCCeEEE
Confidence 34689999999999999999999999998888999998742 22322 356678899999999999 57899999999
Q ss_pred EE----CCEEeccCCCeeEEecc-----------ceeeeEE----EeeeEEEEeecCCCCC
Q psy15127 197 KK----NGQFIDLESSKSLDLSR-----------RTLGWLR----VRPLYWNVARPRANLN 238 (633)
Q Consensus 197 ~~----~~~~~~~~~~~~~~~~~-----------~~~~~~~----~~g~y~C~a~~~~~~~ 238 (633)
++ +|..+............ ..|.+.. ..|.|+|.|.|..+..
T Consensus 257 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 317 (334)
T 1ry7_B 257 LKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFS 317 (334)
T ss_dssp EECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCE
T ss_pred EECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeE
Confidence 99 66666543322111100 1233222 2489999999988743
No 117
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.86 E-value=4.7e-22 Score=197.26 Aligned_cols=214 Identities=15% Similarity=0.128 Sum_probs=146.4
Q ss_pred CCccccccceeeEEEEecccCCCCCceEEee-CceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCc
Q psy15127 16 PRAEIEPATRTNRVSISGDPGFDSRRSRSIF-GSVLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSD 80 (633)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~ 80 (633)
|.+.|+|+. +|.+...+.++.+.. ++.|.|.+++. +|.|+|.|.| +..+|.+...+..
T Consensus 35 p~~~v~W~~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~ 107 (317)
T 2y25_A 35 KETHIVWYK-------DEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCK 107 (317)
T ss_dssp TTCEEEEEE-------TTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHH
T ss_pred CCCEEEEEE-------CCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCc
Confidence 566777443 344444444444433 35899999999 9999999988 1222323333334
Q ss_pred eEEEcCCeEEEEEEEec----------cCCCeEEEEeCCccCCCCC-eEEccc---ceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 81 ATVLSGSVVEFVCRVGG----------DPLPTILWRRDDGKMPTGR-AKILDD---RSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 81 ~~~~~G~~~~L~C~~~~----------~p~p~i~W~~~~~~i~~~~-~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
..+.+|+.+.|.|.+.+ .|.+.+.|++++..+..+. ...... ..|.|.+++.+|+|.|+|.|.|..
T Consensus 108 ~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 187 (317)
T 2y25_A 108 KIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGK 187 (317)
T ss_dssp HHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred eecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCC
Confidence 44556777777777665 6889999999999886543 332222 359999999999999999999999
Q ss_pred ceEEEEEEEEEEee-------------------cccccc-CCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccC
Q psy15127 147 GSISLRASLTVHLL-------------------RDDFRA-EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLE 206 (633)
Q Consensus 147 g~~s~~~~l~V~~~-------------------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 206 (633)
|..+..+.|.|... .|.+.. .+....+.+|+.+.|.|. ..|.|.+.+.|+++|..+...
T Consensus 188 g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~-~~g~p~p~i~W~~~g~~~~~~ 266 (317)
T 2y25_A 188 TGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCN-VWGDPPPEVSWLKNEKALASD 266 (317)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEE-EECSSCCEEEEEESSSEECCC
T ss_pred ceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEE-EecCCCCEEEEEECCEeCCCC
Confidence 98888877776421 122222 345568899999999999 579999999999999988765
Q ss_pred CCeeEEeccc---eeeeEEE----eeeEEEEeecCCCC
Q psy15127 207 SSKSLDLSRR---TLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 207 ~~~~~~~~~~---~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
....+..... .+.+..+ .|.|+|.|.|..+.
T Consensus 267 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 304 (317)
T 2y25_A 267 DHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS 304 (317)
T ss_dssp SSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEE
T ss_pred CcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCe
Confidence 5433332222 2333222 48999999998774
No 118
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.86 E-value=7.5e-21 Score=188.40 Aligned_cols=229 Identities=15% Similarity=0.156 Sum_probs=156.3
Q ss_pred cccCCCCCCCCCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe-------------cC
Q psy15127 5 LDTNHAHPMSSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE-------------AL 69 (633)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-------------v~ 69 (633)
+.+.|..-...|.+.|+|+....... .......++.. .+++|.|.+++. +|.|+|.|.| +.
T Consensus 23 v~L~C~~~~~~~~~~v~W~k~~~~~~---~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~ 98 (315)
T 1itb_B 23 DVRPCPLNPNEHKGTITWYKDDSKTP---VSTEQASRIHQ-HKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 98 (315)
T ss_dssp CCCBCCCCSCCCSSCCCEECTTSCSC---SCCCTTSSSEE-CSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEEC
T ss_pred EEEEeeccCcCCCceEEEEeCCCcCc---cccccCCcEec-cCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeC
Confidence 34455444444467888654332110 01123445544 357899999998 9999999998 11
Q ss_pred cCCeeeeCC---CceEEEcCCeEEEEEEE------eccCCCeEEEEeCCccCCCC-CeEEcccceEEEccCCCCCCeEEE
Q psy15127 70 IKPFPISEP---SDATVLSGSVVEFVCRV------GGDPLPTILWRRDDGKMPTG-RAKILDDRSLQIENVGPQDEGLYI 139 (633)
Q Consensus 70 ~~p~~~~~~---~~~~~~~G~~~~L~C~~------~~~p~p~i~W~~~~~~i~~~-~~~~~~~~~L~i~~v~~~d~G~Y~ 139 (633)
.+|.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|+|++..+..+ ......++.|.|.+++.+|+|.|+
T Consensus 99 ~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 178 (315)
T 1itb_B 99 NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYT 178 (315)
T ss_dssp CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEE
T ss_pred CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEE
Confidence 223222221 12568899999999998 78899999999999988543 334455679999999999999999
Q ss_pred EEEE-eCCceE---EEEEEEEEEe----eccccccCCCc-eEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCe-
Q psy15127 140 CDVE-NLVGSI---SLRASLTVHL----LRDDFRAEPKD-TRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK- 209 (633)
Q Consensus 140 C~~~-n~~g~~---s~~~~l~V~~----~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~- 209 (633)
|.|. |..|.. +..+.+.+.. .+|.+...+.. ..+.+|+.+.|.|. +.|.|.+.+.|+++|..+......
T Consensus 179 C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~-~~g~P~p~i~W~~~g~~i~~~~~~~ 257 (315)
T 1itb_B 179 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICN-VTGQLSDIAYWKWNGSVIDEDDPVL 257 (315)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEE-EEECTTSEEEEEETTEECCTTCSSE
T ss_pred EEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEE-EecCCCCeeEEEECCEECCcccccc
Confidence 9999 788875 4455555542 23666555554 46889999999999 588999999999999998765431
Q ss_pred ---eEEecc----------ceeeeE----EE-eeeEEEEeecCCCCC
Q psy15127 210 ---SLDLSR----------RTLGWL----RV-RPLYWNVARPRANLN 238 (633)
Q Consensus 210 ---~~~~~~----------~~~~~~----~~-~g~y~C~a~~~~~~~ 238 (633)
+..... ..|.+. .. .|.|+|.|.|..+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~ 304 (315)
T 1itb_B 258 GEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGID 304 (315)
T ss_dssp EEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCE
T ss_pred cccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCce
Confidence 111111 122222 12 588999999998754
No 119
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.86 E-value=7.7e-20 Score=193.25 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=151.2
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCC----CeEEEEeC--CccC-----------------CCCCeEEcc-----cceEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPL----PTILWRRD--DGKM-----------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~----p~i~W~~~--~~~i-----------------~~~~~~~~~-----~~~L~i 127 (633)
.+|..+.+.+|++++|.|.+.+.+. ..+.|||+ |..+ ..+|+.... +.+|.|
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 84 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNL 84 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEE
Confidence 4577889999999999999986543 67999986 3211 023444332 258999
Q ss_pred ccCCCCCCeEEEEEEEeCCc-----------e--EEEEEEEEEEee---ccccc-cCCCceEEecCCcEEEEEeCCCCCC
Q psy15127 128 ENVGPQDEGLYICDVENLVG-----------S--ISLRASLTVHLL---RDDFR-AEPKDTRVASGETALLECGPPKGQP 190 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g-----------~--~s~~~~l~V~~~---~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p 190 (633)
.+++.+|+|.|.|.+.+..+ . ....+.|.|... +|.+. ..+.......|+.+.|.|.+....|
T Consensus 85 ~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 85 RSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred CcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 99999999999999987642 1 234467777742 13332 1222110234689999999655557
Q ss_pred CC-eEEEEECCEEeccCCCeeEEecc------ceeeeEEE---eeeEEEEeecCCCCCCcc--------------ccc--
Q psy15127 191 EP-TLHWKKNGQFIDLESSKSLDLSR------RTLGWLRV---RPLYWNVARPRANLNPRY--------------IGR-- 244 (633)
Q Consensus 191 ~~-~i~W~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~g~y~C~a~~~~~~~p~~--------------~~~-- 244 (633)
.+ .|.|++++............... ..+.+... .|.|+|.|.|..+....- ...
T Consensus 165 ~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~p 244 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQ 244 (512)
T ss_pred CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcCCceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCC
Confidence 65 99999976432110000000001 11222111 589999999976532110 000
Q ss_pred --------------------------------------------------ccceeEE-------ecCCceEEEEEEEeee
Q psy15127 245 --------------------------------------------------KMASLLI-------WNHPRVNRLSCFAEGS 267 (633)
Q Consensus 245 --------------------------------------------------~~~~~~~-------~~~g~~~~l~C~~~g~ 267 (633)
......+ +..|+.++|.|.+.|.
T Consensus 245 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~ 324 (512)
T 1zvo_C 245 PQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGS 324 (512)
T ss_pred CchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEece
Confidence 0011111 2358999999999987
Q ss_pred cC--CeeEEEECCEEEEeccCCccceEEEcc------CceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 268 PL--PSVFWTQEGSQVLMFPGNAYGHLHVTQ------EGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 268 p~--~~v~W~~~g~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
.+ ..|+|+++|..+.. ........... .+.|.|.....+|.|.|+|.|.|..+..
T Consensus 325 ~P~~~~i~W~k~g~~~~~--~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 325 DLKDAHLTWEVAGKVPTG--GVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred ECCCeEEEEEECCEeccC--ceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 44 38999999987531 00001111111 2369999999999999999999987643
No 120
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.85 E-value=2.6e-19 Score=189.25 Aligned_cols=283 Identities=16% Similarity=0.124 Sum_probs=168.9
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEecC-----------------------------cCCeeee-CCCceE
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKEAL-----------------------------IKPFPIS-EPSDAT 82 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~v~-----------------------------~~p~~~~-~~~~~~ 82 (633)
.|+.+.. +.+|.|.+++. +|.|.|.+.+.. .+|.+.. .+....
T Consensus 67 ~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~ 146 (512)
T 1zvo_C 67 GRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRH 146 (512)
T ss_pred CceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCccc
Confidence 4666543 25799999998 999999986421 1122221 111110
Q ss_pred EEcCCeEEEEEEEecc-CCC-eEEEEeCCccCC--CCCeEE------cccceEEEccCCCCCCeEEEEEEEeCCceEEEE
Q psy15127 83 VLSGSVVEFVCRVGGD-PLP-TILWRRDDGKMP--TGRAKI------LDDRSLQIENVGPQDEGLYICDVENLVGSISLR 152 (633)
Q Consensus 83 ~~~G~~~~L~C~~~~~-p~p-~i~W~~~~~~i~--~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~ 152 (633)
...|+.++|.|.+.+. |.| .|+|++++.... ...... ...+.|.|..+..+ .|.|+|.|.|..+.....
T Consensus 147 ~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~ 225 (512)
T 1zvo_C 147 PKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKE 225 (512)
T ss_pred ccCCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEE
Confidence 2246899999999876 665 899999764321 000011 11235889888877 999999999988775444
Q ss_pred E-----------EEEEEee---------------------------------------------------cccc-ccCCC
Q psy15127 153 A-----------SLTVHLL---------------------------------------------------RDDF-RAEPK 169 (633)
Q Consensus 153 ~-----------~l~V~~~---------------------------------------------------~p~~-~~~~~ 169 (633)
+ .|.|..+ +|.+ ...|.
T Consensus 226 ~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~ 305 (512)
T 1zvo_C 226 IFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPA 305 (512)
T ss_pred EecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCC
Confidence 3 2344322 0222 22333
Q ss_pred ceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEeccCCC-e-eEEeccc------eeeeEE----EeeeEEEEeecCCC
Q psy15127 170 DTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDLESS-K-SLDLSRR------TLGWLR----VRPLYWNVARPRAN 236 (633)
Q Consensus 170 ~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~~~~-~-~~~~~~~------~~~~~~----~~g~y~C~a~~~~~ 236 (633)
...+.+|+.+.|.|.+...+|. ..|.|+++|..+..... . .....++ .+.+.. ..|.|+|.|.|...
T Consensus 306 ~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~ 385 (512)
T 1zvo_C 306 VQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSL 385 (512)
T ss_pred hHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCC
Confidence 3446679999999995444453 49999999987652111 1 1111111 122221 23799999999876
Q ss_pred CCCcccc-c-------ccceeEEec---CCceEE-EEEEEeeecCC--eeEEEECCEEEEeccCCccceEEEccC-----
Q psy15127 237 LNPRYIG-R-------KMASLLIWN---HPRVNR-LSCFAEGSPLP--SVFWTQEGSQVLMFPGNAYGHLHVTQE----- 297 (633)
Q Consensus 237 ~~p~~~~-~-------~~~~~~~~~---~g~~~~-l~C~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~----- 297 (633)
..+.... . ..+...... .|+.+. |.|.+.|.+++ .+.|.|+|..+.... ..........+
T Consensus 386 ~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~-~~~~~~~~~~dg~~~~ 464 (512)
T 1zvo_C 386 PPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSG-FAPARPPPQPGSTTFW 464 (512)
T ss_pred CCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcc-ccccceeECCCCCEEE
Confidence 5431111 0 011222221 478899 99999996554 689999999874211 00011112222
Q ss_pred --ceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 298 --GTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 298 --~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
..|.|.....+|.|.|+|.|.|.....
T Consensus 465 ~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 465 AWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred EEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 246777777778999999999986543
No 121
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.85 E-value=1.9e-21 Score=180.18 Aligned_cols=134 Identities=20% Similarity=0.351 Sum_probs=108.7
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccC------------C-CCCeEEcccceEEEccCCCCCCe
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKM------------P-TGRAKILDDRSLQIENVGPQDEG 136 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i------------~-~~~~~~~~~~~L~i~~v~~~d~G 136 (633)
.++.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+|++..+ . ..+... ....|.|.+++.+|+|
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF-LPTGITFKSVTREDTG 81 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE-ETTEEECSCCCTTSCS
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe-eccEEEEeeCCHHHCc
Confidence 4567778888999999999999999999899999999987652 1 123332 3478999999999999
Q ss_pred EEEEEEEeCCc--eEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEecc
Q psy15127 137 LYICDVENLVG--SISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDL 205 (633)
Q Consensus 137 ~Y~C~~~n~~g--~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~ 205 (633)
.|+|.+.+..| ..+..+.|.|..+ |.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++..+..
T Consensus 82 ~Y~C~~~~~~g~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~ 151 (209)
T 1nbq_A 82 TYTCMVSEEGGNSYGEVKVKLIVLVP-PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPT 151 (209)
T ss_dssp EEEEEEEETTSSCEECCEEECCEEBC-CCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCS
T ss_pred EEEEEEecCCCCccceEEEEEEEecC-CcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCC
Confidence 99999999865 3566778888887 66665566677899999999999558899999999999876543
No 122
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=3.1e-21 Score=194.22 Aligned_cols=194 Identities=16% Similarity=0.146 Sum_probs=123.0
Q ss_pred EeeCceEEEcCCCC--CCeEEEEEEe------------cCcCCee----eeCCCceEEEcCCeEEEEEEE-----eccCC
Q psy15127 44 SIFGSVLGARGALS--DDQWKLIAKE------------ALIKPFP----ISEPSDATVLSGSVVEFVCRV-----GGDPL 100 (633)
Q Consensus 44 ~~~~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~----~~~~~~~~~~~G~~~~L~C~~-----~~~p~ 100 (633)
...+++|.|.+++. +|.|+|.|.| +..+|.+ ...+....+.+|+.+.|.|.+ .+.|.
T Consensus 75 ~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~ 154 (349)
T 4dep_C 75 SKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK 154 (349)
T ss_dssp EEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSC
T ss_pred eecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCC
Confidence 34578999999998 9999999998 2222221 122345578899999999985 67899
Q ss_pred CeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC-ceE---EEEEEEEEEee-----ccccccCCCce
Q psy15127 101 PTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV-GSI---SLRASLTVHLL-----RDDFRAEPKDT 171 (633)
Q Consensus 101 p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~-g~~---s~~~~l~V~~~-----~p~~~~~~~~~ 171 (633)
+.++|+|++..+.........+..|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|..+ +|.+...+...
T Consensus 155 ~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~ 234 (349)
T 4dep_C 155 PTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHV 234 (349)
T ss_dssp CEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC------
T ss_pred ceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCce
Confidence 9999999999986654444455789999999999999999999986 543 67777777764 25444444332
Q ss_pred --EEecCCcEEEEEeCCC---CCCCCeEEEEECCEEeccCCCe-eE-----------EeccceeeeE----EEe-eeEEE
Q psy15127 172 --RVASGETALLECGPPK---GQPEPTLHWKKNGQFIDLESSK-SL-----------DLSRRTLGWL----RVR-PLYWN 229 (633)
Q Consensus 172 --~~~~g~~~~l~C~~~~---~~p~~~i~W~~~~~~~~~~~~~-~~-----------~~~~~~~~~~----~~~-g~y~C 229 (633)
.+.+|+.+.|.|.+.. +.|.+.+.|+++|..+...... .. ......+.+. ... |.|+|
T Consensus 235 ~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C 314 (349)
T 4dep_C 235 VYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314 (349)
T ss_dssp ----------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEE
T ss_pred eEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEE
Confidence 6789999999999532 5788999999999887652111 00 0001112222 235 89999
Q ss_pred EeecCCCC
Q psy15127 230 VARPRANL 237 (633)
Q Consensus 230 ~a~~~~~~ 237 (633)
.|.|..+.
T Consensus 315 ~a~N~~G~ 322 (349)
T 4dep_C 315 HARSAKGE 322 (349)
T ss_dssp EEECSSCE
T ss_pred EEEcCCCc
Confidence 99998874
No 123
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.85 E-value=2.3e-20 Score=171.70 Aligned_cols=173 Identities=16% Similarity=0.230 Sum_probs=135.7
Q ss_pred CCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEec
Q psy15127 412 PPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENS 491 (633)
Q Consensus 412 ~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~ 491 (633)
+|..+.+...+.+++.|+|.++. ++.+.+|.|+|+..+....+...........++|.+|.|++.|.|+|+|.|.
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~-----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 99 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLN-----SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKN 99 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCS-----SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESS
T ss_pred CCCccEEEecCCCEEEEEecCCC-----CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence 56777777888999999999987 3578999999998765444444334456788999999999999999999999
Q ss_pred cccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 492 HGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 492 ~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
.|.|.++ .+.+...+| +|.++ ++..++.+++.|+|++| .++.+.+| .|
T Consensus 100 ~g~s~~~----~~~t~~~~p-~P~~l----------------~~~~~~~~sv~l~W~~p----------~~~~i~~Y-~v 147 (203)
T 2gee_A 100 GGESTPT----TLTQQTAVP-PPTDL----------------RFTNIGPDTMRVTWAPP----------PSIDLTNF-LV 147 (203)
T ss_dssp SCBCCCE----EEEEECCCC-CCEEE----------------EEEEEETTEEEEEEECC----------SSCCCSEE-EE
T ss_pred CCccccE----eeeecCCCc-CCCce----------------EEEEcCCCEEEEEEcCC----------CCCCccEE-EE
Confidence 9987654 244444444 44444 77888999999999954 24689999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
+|+...... .|. .+...+..++++|.+|+|++.|.|+|+|.|..|+|+|+
T Consensus 148 ~~~~~~~~~------~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 148 RYSPVKNEE------DVA-----ELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp EEEETTCGG------GCE-----EEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EEEECCCCC------ccE-----EEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 999865432 122 33345678999999999999999999999999999985
No 124
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=1.1e-20 Score=169.63 Aligned_cols=167 Identities=18% Similarity=0.239 Sum_probs=120.7
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCe-EEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPT-ILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~-i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
..+|.+...|....+.+|+.++|.|.+.+.|.+. +.|+|++..+.. ..+.|.|.+++.+|+|.|+|.+.|..+
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 78 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS------QASSYFIDAATVNDSGEYRCQTNLSTL 78 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES------SCSEEEESSCCGGGCEEEEEECSSSCC
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC------CceEEEEeCCCcccCEEEEEEeeCCcc
Confidence 4578898999888999999999999999887776 899999987653 346899999999999999999988554
Q ss_pred eEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeE
Q psy15127 148 SISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLY 227 (633)
Q Consensus 148 ~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 227 (633)
+..+.|.|..+ +.. ..+....+.+|+.+.|.|.+..+.|.+.+.|+++|..+
T Consensus 79 --s~~~~l~V~~~-~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~------------------------ 130 (175)
T 1fnl_A 79 --SDPVQLEVHIG-WLL-LQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDR------------------------ 130 (175)
T ss_dssp --CCCEEEEEECS-SEE-EECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEE------------------------
T ss_pred --cccEEEEEeCC-Cce-eeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEc------------------------
Confidence 45566777644 322 22233456677777777763222233366666555433
Q ss_pred EEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCC
Q psy15127 228 WNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQK 307 (633)
Q Consensus 228 ~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 307 (633)
.. ......|.|.++..
T Consensus 131 ------------------------------------------------------~~----------~~~~~~L~i~~v~~ 146 (175)
T 1fnl_A 131 ------------------------------------------------------KY----------FHHNSDFHIPKATL 146 (175)
T ss_dssp ------------------------------------------------------EE----------EEECCCEEESSCCG
T ss_pred ------------------------------------------------------cC----------CCCCCEEEEcccCh
Confidence 10 11245899999999
Q ss_pred CCCeEEEEEEEeCCce-eEEEEEEEEE
Q psy15127 308 EDAGFFVCSALSVAGS-TTVRAFLQVR 333 (633)
Q Consensus 308 ~d~G~Y~C~a~n~~g~-~~~~~~l~v~ 333 (633)
+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 147 ~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 147 KDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred hhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999999999997664 4556666665
No 125
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.85 E-value=7.1e-21 Score=186.16 Aligned_cols=205 Identities=12% Similarity=-0.008 Sum_probs=148.5
Q ss_pred EEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe---------cCcCCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 28 RVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE---------ALIKPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~---------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
.|..+|.+. ......+++|.|.+++. +|.|+|.|.| +..+|.+...+....+.+|+.+.|.|.+.
T Consensus 41 ~W~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 116 (290)
T 2o26_X 41 RWTFKTYFN----EMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLT 116 (290)
T ss_dssp EEEEECSSS----CEEEECSSEEEETTCCGGGCEEEEEEESSSCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBS
T ss_pred EEecCCcce----eeecCCCceEEEeccCHHhCeEEEEEeeCCccEEEEEEEeCCCcccccccceEEecCCeEEEeCcCC
Confidence 344455443 22334458899999998 9999999965 44555555667788899999999999998
Q ss_pred ccCC-CeEEE-EeCCccCCCCCe-EEcccceEEEccCCCCCCe-EEEEEEEeCCceE-EEEEEEEEEe---eccccccCC
Q psy15127 97 GDPL-PTILW-RRDDGKMPTGRA-KILDDRSLQIENVGPQDEG-LYICDVENLVGSI-SLRASLTVHL---LRDDFRAEP 168 (633)
Q Consensus 97 ~~p~-p~i~W-~~~~~~i~~~~~-~~~~~~~L~i~~v~~~d~G-~Y~C~~~n~~g~~-s~~~~l~V~~---~~p~~~~~~ 168 (633)
+ |. +.++| +++|..+..+.. ....++.|.|.+++.+|+| .|+|.|.|..+.. +..+.|.|.. .+|.+...+
T Consensus 117 ~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~ 195 (290)
T 2o26_X 117 D-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPE 195 (290)
T ss_dssp C-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSC
T ss_pred C-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCC
Confidence 5 77 89999 568888866543 3444679999999999999 9999999986553 4457888872 237777777
Q ss_pred CceEEecCCcEEEEEeCCCCCCCCe-EEEEECCEEe----ccCCCeeEE-----eccceeeeEE----EeeeEEEEeecC
Q psy15127 169 KDTRVASGETALLECGPPKGQPEPT-LHWKKNGQFI----DLESSKSLD-----LSRRTLGWLR----VRPLYWNVARPR 234 (633)
Q Consensus 169 ~~~~~~~g~~~~l~C~~~~~~p~~~-i~W~~~~~~~----~~~~~~~~~-----~~~~~~~~~~----~~g~y~C~a~~~ 234 (633)
....+.+|+.+.|.|. ..+.|.+. +.|++++..+ .......+. .....|.+.. ..|.|+|.|.|.
T Consensus 196 ~~~~v~~G~~v~l~C~-~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~ 274 (290)
T 2o26_X 196 TSHLLKKGDTFTVVCT-IKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNT 274 (290)
T ss_dssp SBCCCCTTCCEEEEEE-EEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECS
T ss_pred CcceEecCCcEEEEEE-EecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCC
Confidence 7778999999999999 46888886 9999998763 222221111 1112222221 248999999998
Q ss_pred CCCC
Q psy15127 235 ANLN 238 (633)
Q Consensus 235 ~~~~ 238 (633)
.+..
T Consensus 275 ~g~~ 278 (290)
T 2o26_X 275 FGSA 278 (290)
T ss_dssp SCEE
T ss_pred CCcE
Confidence 7743
No 126
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.85 E-value=1.7e-19 Score=177.27 Aligned_cols=128 Identities=23% Similarity=0.338 Sum_probs=93.0
Q ss_pred eEEecc-cccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEe--eCCeEEEEeCCCCC
Q psy15127 359 RIACDL-RETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNT--TRGSVTLGWGEPEP 435 (633)
Q Consensus 359 ~~i~~~-~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~--~~~~i~l~W~~~~~ 435 (633)
..+.++ .....|.|+|.|.|..|..... .+.+... ....|.+|..+.+... +.+++.|+|++|..
T Consensus 160 ~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~-~~~~~~~-----------~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~ 227 (303)
T 1i1r_A 160 CTVDYSTVYFVNIEVWVEAENALGKVTSD-HINFDPV-----------YKVKPNPPHNLSVINSEELSSILKLTWTNPSI 227 (303)
T ss_dssp EECSSCCCTTSCEEEEEEEEETTEEEECC-CEEECGG-----------GGEECCCCEEEEEECCSSSSSCEEEEEECCGG
T ss_pred EEECCcCcccccEEEEEEEEcCCCCcccC-CEEECHH-----------HeEecCCCcceEEEEecCCCCEEEEEECCCCC
Confidence 345567 6778899999999999976321 1112110 0123456666665543 66899999999985
Q ss_pred CCCCCcceeEEEEEEEEecCCCCeEEEEE---eeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCC
Q psy15127 436 RGGGVAPVIGYTVEYFSSDLQTGWVVAAH---RITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSP 502 (633)
Q Consensus 436 ~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~ 502 (633)
. ++++.+|.|+|+..+ ...|..... ......++|.+|.|++.|.|+|+|.|..|.|++|.++.
T Consensus 228 ~---~~~i~~Y~v~y~~~~-~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~ 293 (303)
T 1i1r_A 228 K---SVIILKYNIQYRTKD-ASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE 293 (303)
T ss_dssp G---GTSCEEEEEEEEETT-CSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCC
T ss_pred C---CcccEEEEEEEEeCC-CCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCC
Confidence 3 468999999999876 356765432 23457899999999999999999999999999987763
No 127
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.85 E-value=2e-18 Score=174.95 Aligned_cols=268 Identities=15% Similarity=0.118 Sum_probs=186.6
Q ss_pred CceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecccCCCc-------------eEEeCCCcc--cc---------
Q psy15127 297 EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKG-------------TFTLGQPNL--AT--------- 352 (633)
Q Consensus 297 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p-------------~~~~~~~~~--~~--------- 352 (633)
...+.+.++.......|...|.|..|..... ...+. +..|+| .+.|.+... ..
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~--~~~~~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~ 133 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTII--PAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPV 133 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCE-EEEEC--CCCCCCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEET
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCce-eeeec--CCCcCCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEEC
Confidence 3468888888888888888899988754322 12222 222222 234433311 00
Q ss_pred -CC----------CCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEe
Q psy15127 353 -GN----------SDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNT 421 (633)
Q Consensus 353 -g~----------p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~ 421 (633)
+. ....+.+.+|.....|.|++.|.|..|.... ....... .+.+|..+.+...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~-~~~~~~~---------------~~~~P~~l~~~~~ 197 (368)
T 1fnf_A 134 KNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP-LRGRQKT---------------GLDSPTGIDFSDI 197 (368)
T ss_dssp TCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCC-EEEEEEC---------------CCCCCEEEEEESC
T ss_pred CCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCC-eEeeecC---------------CCCCCCccEEEEc
Confidence 10 1234478888999999999999999885432 2222221 1335666667777
Q ss_pred eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCC
Q psy15127 422 TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVS 501 (633)
Q Consensus 422 ~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 501 (633)
..+++.|+|.++. +.+.+|.|+|+..+....+...........++|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus 198 ~~~sv~l~W~~p~------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-- 269 (368)
T 1fnf_A 198 TANSFTVHWIAPR------ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-- 269 (368)
T ss_dssp CSSEEEEEEECCS------SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE--
T ss_pred cCCEEEEEEeCCC------CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc--
Confidence 8899999999875 46899999999876544555444445678899999999999999999999999987642
Q ss_pred CceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcc
Q psy15127 502 PITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAS 581 (633)
Q Consensus 502 ~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~ 581 (633)
.+...+|.+|..+ .+..++.+++.|+|++| . +.+.+| .|+|+..+....
T Consensus 270 ---~~~~t~p~~P~~l----------------~~~~~~~~sv~l~W~~p--------~---~~i~~Y-~v~~~~~~~~~~ 318 (368)
T 1fnf_A 270 ---GQQSTVSDVPRDL----------------EVVAATPTSLLISWDAP--------A---VTVRYY-RITYGETGGNSP 318 (368)
T ss_dssp ---EEEECCCCSCEEE----------------EEEEEETTEEEEEEECC--------S---SCCSEE-EEEEEETTCCSC
T ss_pred ---ccccCCCCCCCee----------------EEEecCCCEEEEEeeCC--------C---CccceE-EEEEEECCCCCc
Confidence 2233445555544 67778899999999954 1 248999 999988765320
Q ss_pred cceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 582 TAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 582 ~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+ ..+...+..+.+++.+|++++.|.|+|+|.|..|.|++|+
T Consensus 319 ------~-----~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 319 ------V-----QEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp ------C-----EEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred ------c-----EEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 1 1222345688999999999999999999999999999874
No 128
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.85 E-value=1.3e-20 Score=193.89 Aligned_cols=259 Identities=14% Similarity=0.067 Sum_probs=172.4
Q ss_pred EEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEE
Q psy15127 250 LIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAF 329 (633)
Q Consensus 250 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 329 (633)
.++..|++++|.|.+. .+.+.|.++|..+.. .++ ....+.|.|.++...|.|.|.|.+.+. ..
T Consensus 213 ~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~------~ri-~~~~~~L~I~nl~~sd~g~y~~~C~~~--~~----- 275 (488)
T 2q7n_A 213 KVVLAGSNMTICCMSP---TKVLSGQIGNTLRPL------IHL-YGQTVAIHILNIPVSENSGTNIIFITD--DD----- 275 (488)
T ss_dssp CEEESSCCCEEEECCS---SCEEEEEETTEECCC------EEC-SSSCEEEECCSCCCCCSSCEEEEEEES--SC-----
T ss_pred CEEcCCCCEEEEEECC---CCEEEEEECCEECch------hhc-cceEEEEEEeCCCcccCCcEEEEEEcC--Ce-----
Confidence 3457899999999998 469999999987632 111 123347889999998888887766421 11
Q ss_pred EEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCC
Q psy15127 330 LQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLF 409 (633)
Q Consensus 330 l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~ 409 (633)
...+.|.+..+
T Consensus 276 ------------------------------------------------------i~~~~l~v~~p--------------- 286 (488)
T 2q7n_A 276 ------------------------------------------------------VYGTVVFAGYP--------------- 286 (488)
T ss_dssp ------------------------------------------------------EEEEEEEEECC---------------
T ss_pred ------------------------------------------------------EEEEEEEeeCC---------------
Confidence 11234444433
Q ss_pred CCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEe-eeeceEEEecCCCCCeEEEEEEE
Q psy15127 410 PGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHR-ITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 410 p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
|++|..+.+.......+.++|.++....-++.++..|.|.|+..+....|...... .....+++..+...+.|.|+|.|
T Consensus 287 P~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A 366 (488)
T 2q7n_A 287 PDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTG 366 (488)
T ss_dssp CCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEE
T ss_pred CCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCccEEEEEEEE
Confidence 34588888888788999999999885421124678999998765432223211110 12345666555446999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.++ + ...+..+....|.+|.++ ++..++.+++.|+|++| ...++.+.+|
T Consensus 367 ~N~~G~~~-S-~~~~~~~~~v~P~PP~nl----------------~v~~~s~~sl~LsW~pP--------~~~~g~~l~Y 420 (488)
T 2q7n_A 367 RNPLGQAQ-S-AVVINVTERVAPHDPTSL----------------KVKDINSTVVTFSWYLP--------GNFTKINLLC 420 (488)
T ss_dssp EETTEEEE-E-EEECCGGGTBCCCCCEEE----------------EEEECSTTCEEEEEEEE--------EECSSSEEEE
T ss_pred EeCCCCcc-c-eEEEEecCCCCCCCCeEE----------------EEEecCCCEEEEEEeCC--------CCCCCcceEE
Confidence 99999964 3 221122233345555555 77788899999999976 3346789999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEeecCCccceE--EeeccccceeEEEEEeccccccccccC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSY--TVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.|+|+..+... |+. + ..+. ....+.+ +|.+|+|++.|.|+|+|.| .|.|.+|
T Consensus 421 -eV~Yr~~~~~~-------w~~-~-~~~~-~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS 474 (488)
T 2q7n_A 421 -QIEICKANSKK-------EVR-N-ATIR-GAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWS 474 (488)
T ss_dssp -EEEEBCTTSCC-------EEE-E-EEEE-CCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCC
T ss_pred -EEEEEECCCCC-------ceE-E-EEEe-cCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCC
Confidence 99999875532 532 1 1111 1123455 9999999999999999999 9996444
No 129
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=6.6e-21 Score=177.12 Aligned_cols=177 Identities=20% Similarity=0.292 Sum_probs=129.0
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC----CCeEEEEeC----------------CccCC------CCCeEEcc------
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP----LPTILWRRD----------------DGKMP------TGRAKILD------ 121 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p----~p~i~W~~~----------------~~~i~------~~~~~~~~------ 121 (633)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. .++.....
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 82 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSG 82 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGT
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCC
Confidence 34455677899999999999998776 468999983 33332 33444432
Q ss_pred cceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 122 DRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 122 ~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
+.+|.|.+++.+|+|.|+|.+.+..+..+..+.|.|..+ |.+...+....+.+|+.+.|.|.+..+.|.+.+.|++++.
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~-p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK-PSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSD 161 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-CBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECST
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcC-CCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCC
Confidence 467999999999999999999999998899999999987 5554444444467788888888843677777777777432
Q ss_pred EeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEE
Q psy15127 202 FIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQV 281 (633)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~ 281 (633)
......
T Consensus 162 ~~~~~~-------------------------------------------------------------------------- 167 (214)
T 3jz7_A 162 SQTMPT-------------------------------------------------------------------------- 167 (214)
T ss_dssp TCCCCG--------------------------------------------------------------------------
T ss_pred CCccCc--------------------------------------------------------------------------
Confidence 111000
Q ss_pred EeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 282 LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.......++.|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 168 --------~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 168 --------PWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp --------GGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred --------cceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 00011134589999999999999999999999999988888776
No 130
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.85 E-value=8.5e-20 Score=167.55 Aligned_cols=129 Identities=14% Similarity=0.221 Sum_probs=90.5
Q ss_pred eeeCCCceE-EEcCCeEEEEEEEeccCCCeEEEEeCC-ccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEE
Q psy15127 74 PISEPSDAT-VLSGSVVEFVCRVGGDPLPTILWRRDD-GKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISL 151 (633)
Q Consensus 74 ~~~~~~~~~-~~~G~~~~L~C~~~~~p~p~i~W~~~~-~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~ 151 (633)
+...|.+.. +.+|+.++|.|.+.|.|.|.|.|+++. ..+............|.|.+++.+|+|.|+|.|.|..+..+.
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 445555544 459999999999999999999999843 222211111223457999999999999999999999988888
Q ss_pred EEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC--CeEEEEECCEEe
Q psy15127 152 RASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE--PTLHWKKNGQFI 203 (633)
Q Consensus 152 ~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~ 203 (633)
.+.|.|..++..+.+.+. ..+.+|+.++|.|.+..+.|. ++|.|++++..+
T Consensus 83 ~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l 135 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLM 135 (202)
T ss_dssp EEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEE
T ss_pred EEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeEC
Confidence 999999987333333333 456777777777774333333 256777766544
No 131
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=6.4e-21 Score=171.27 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=120.4
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCC-eEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLP-TILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p-~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
+..+|.+...|....+.+|+.++|.|.+.+.+.+ .++|+|++..+... ++.|.|.+++.+|+|.|+|.+.|..
T Consensus 1 v~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~~~~ 74 (176)
T 1f2q_A 1 VPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET------NSSLNIVNAKFEDSGEYKCQHQQVN 74 (176)
T ss_dssp ---CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC------SSEEEECSCCGGGCEEEEEECTTSS
T ss_pred CCCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC------ceEEEEeccceecCEEEEEEcCCcc
Confidence 3567889999999899999999999999888775 69999999887643 4689999999999999999998765
Q ss_pred ceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeee
Q psy15127 147 GSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPL 226 (633)
Q Consensus 147 g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 226 (633)
+ +..+.|.|..+ +. ...+....+.+|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 75 ~--s~~~~l~V~~~-~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------------------- 129 (176)
T 1f2q_A 75 E--SEPVYLEVFSD-WL-LLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY--------------------- 129 (176)
T ss_dssp C--CCCEEEEEECS-SE-EEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS---------------------
T ss_pred c--cccEEEEEeCc-ce-eecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee---------------------
Confidence 4 34566666633 22 22223345667777777777434455556666665543310
Q ss_pred EEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCC
Q psy15127 227 YWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQ 306 (633)
Q Consensus 227 y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 306 (633)
...+..|.|.++.
T Consensus 130 -------------------------------------------------------------------~~~~~~L~i~~v~ 142 (176)
T 1f2q_A 130 -------------------------------------------------------------------WYENHNISITNAT 142 (176)
T ss_dssp -------------------------------------------------------------------CCCSSEEEESSCC
T ss_pred -------------------------------------------------------------------ecCCCeEEECCCC
Confidence 0123589999999
Q ss_pred CCCCeEEEEEEEeCCce-eEEEEEEEEEe
Q psy15127 307 KEDAGFFVCSALSVAGS-TTVRAFLQVRE 334 (633)
Q Consensus 307 ~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~ 334 (633)
.+|+|.|+|.|.|..+. .+..+.|.|..
T Consensus 143 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 143 VEDSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cccCEEEEEEEEeCCcceEecCEEEEEec
Confidence 99999999999997544 45557777774
No 132
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=5.5e-20 Score=169.03 Aligned_cols=178 Identities=24% Similarity=0.301 Sum_probs=127.5
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEE-EeccCC-CeEEEEeCCccCC---CCCeE-EcccceEEEccCCCCCCeEEEEEEEe
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCR-VGGDPL-PTILWRRDDGKMP---TGRAK-ILDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~-~~~~p~-p~i~W~~~~~~i~---~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
+++....+..+.+.+|+.+.|.|. +.+.|. +.+.|+|++..+. ..+.. ...++.|.|.+++.+|+|.|+|.+.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 344445567889999999999999 788888 9999999998873 22333 33467899999999999999999998
Q ss_pred CCceEEE---EEEEEEEee------ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecc
Q psy15127 145 LVGSISL---RASLTVHLL------RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSR 215 (633)
Q Consensus 145 ~~g~~s~---~~~l~V~~~------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 215 (633)
..+.... .+.+.+... +|.+...+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---------------------------------------------- 121 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERTTKPYPADIVVQFK---------------------------------------------- 121 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSSCCCEEEEEEEECC----------------------------------------------
T ss_pred cCCCcchhhcccceeeccccccCCCCCceEecCC----------------------------------------------
Confidence 7655332 222222211 011111111
Q ss_pred ceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc
Q psy15127 216 RTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT 295 (633)
Q Consensus 216 ~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 295 (633)
...+..|+.++|.|.+.|.|.+.+.|++++..+.. ......
T Consensus 122 ---------------------------------~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~------~~~~~~ 162 (201)
T 3s97_C 122 ---------------------------------DVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS------TAEIST 162 (201)
T ss_dssp ---------------------------------CEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT------TCEEET
T ss_pred ---------------------------------ceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC------ceeecC
Confidence 22334567777888888888888888888875421 122233
Q ss_pred cCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 296 QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 296 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.++.|.|.++..+|.|.|+|.|.|..|..+.++.|.|.
T Consensus 163 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 163 SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 56689999999999999999999999999999888875
No 133
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=2.1e-21 Score=194.97 Aligned_cols=198 Identities=18% Similarity=0.223 Sum_probs=142.6
Q ss_pred CCeEEEEEEe--------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC--CeEEcccceEEE
Q psy15127 58 DDQWKLIAKE--------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG--RAKILDDRSLQI 127 (633)
Q Consensus 58 ~G~Y~C~a~~--------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~--~~~~~~~~~L~i 127 (633)
.|.|+|.+.+ ...+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ......++.|.|
T Consensus 137 ~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i 216 (347)
T 2ifg_A 137 EQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTL 216 (347)
T ss_dssp GGCCCCSSSSCSSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEE
T ss_pred ccCCCCCCChHHhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEE
Confidence 6899998876 335789999999999999999999999999999999999998765321 112334578999
Q ss_pred ccCCCCCCe-EEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccC
Q psy15127 128 ENVGPQDEG-LYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLE 206 (633)
Q Consensus 128 ~~v~~~d~G-~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 206 (633)
.+++.+|+| .|+|.|.|..|..+..+.|.|..+ |.+ ....+.+|+.+.|.|. +.|.|.+.|.|+++|..+...
T Consensus 217 ~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~-P~i----~~~~~~~g~~v~l~C~-~~g~P~p~i~W~~~g~~l~~~ 290 (347)
T 2ifg_A 217 ANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFP-ASV----QLHTAVEMHHWCIPFS-VDGQPAPSLRWLFNGSVLNET 290 (347)
T ss_dssp ESCCSTTTTCCEEECCEETTEECCEEECCCCBEE-EEE----EECCCEESSSEEEEEE-EEEESCCEEEEEETTEECCCC
T ss_pred eeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCC-Cee----eeccCccCceEEEEEE-eeecCCCcEEEEeCCEECCCC
Confidence 999999999 999999999998888888888776 543 1112345666666666 355566666666665544321
Q ss_pred CCeeEEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccC
Q psy15127 207 SSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPG 286 (633)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~ 286 (633)
........ ..+
T Consensus 291 ~~~~~~~~-------------------------------------------------------------~~~-------- 301 (347)
T 2ifg_A 291 SFIFTEFL-------------------------------------------------------------EPA-------- 301 (347)
T ss_dssp SSEEEEEC-------------------------------------------------------------CCC--------
T ss_pred cceeeEEE-------------------------------------------------------------eec--------
Confidence 11000000 000
Q ss_pred CccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 287 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 287 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
......+++|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 302 ----~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 302 ----ANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp ----TTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred ----CCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 00001245799999999999999999999999999998888764
No 134
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.84 E-value=5.4e-21 Score=197.97 Aligned_cols=210 Identities=19% Similarity=0.204 Sum_probs=144.3
Q ss_pred cccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCccee
Q psy15127 365 RETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVI 444 (633)
Q Consensus 365 ~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~ 444 (633)
...+.|.|.|.+.|..+........ . .-...|++|..+. ..++.+++.|+|++|...+ +.++.
T Consensus 303 ~s~~~Gs~~C~C~ng~~ra~~d~~~-------~-------~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~g--G~~i~ 365 (536)
T 3fl7_A 303 LPSPEGATSCECEEGFFRAPQDPAS-------M-------PCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSG--GREDI 365 (536)
T ss_dssp ECCCTTCSSCEECTTCBCCTTCCTT-------S-------CCBCCCCCBSCEE-EECCTTSEEEEECCBSCCC--SCSCC
T ss_pred CCCCCCccEEEEeccccccCCCccc-------c-------ccccCCCcccceE-EEecCCEEEEEEeCCcCCC--CCcee
Confidence 3567899999999999865321110 0 0011356777774 4688899999999998653 45799
Q ss_pred EEEEEEEEecCC-CCeE---------EEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCC---CCCCCceeecCCCC
Q psy15127 445 GYTVEYFSSDLQ-TGWV---------VAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIP---SPVSPITRTLGLNS 511 (633)
Q Consensus 445 ~Y~v~~~~~~~~-~~~~---------~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~---s~~~~~~~t~~~~p 511 (633)
+|.|+|+..+.. ..|. ........+.++|.+|.|++.|.|+|+|.|..|.+.+ +... .+.|.+.+
T Consensus 366 ~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v-~v~T~~~~- 443 (536)
T 3fl7_A 366 VYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTA-SVSINQTE- 443 (536)
T ss_dssp EEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEE-EEECCSCC-
T ss_pred EEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCcccee-EEeecccC-
Confidence 999999974321 1221 1111234678999999999999999999999998543 2222 23443333
Q ss_pred CCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeecc
Q psy15127 512 LVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKY 591 (633)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~ 591 (633)
|... .+..++.++|.|+|++| ...++.|++| .|+|+..+... .|.
T Consensus 444 --Ps~~----------------~~~~~s~tSV~LsW~pP--------~~~ng~I~~Y-~V~y~~~~~~~------~~~-- 488 (536)
T 3fl7_A 444 --PPKV----------------RLEGRSTTSLSVSWSIP--------PPQQSRVWKY-EVTYRKKGDSN------SYN-- 488 (536)
T ss_dssp --CCEE----------------EEEECCC-CCEEEEECC--------TTTTTTCSEE-EEEEEEC--CC------CCE--
T ss_pred --CCCC----------------ceeeccCCeEEEEEECC--------cCCCCcccEE-EEEEEECCCCc------eEE--
Confidence 3333 44677899999999955 5678999999 99998875431 111
Q ss_pred ceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 592 NMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 592 ~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
. .....++++|++|+|++.|.|+|+|.|.+|.|++|+
T Consensus 489 ---~--v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~ 525 (536)
T 3fl7_A 489 ---V--RRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSK 525 (536)
T ss_dssp ---E--EEESSSEEECCSCCSSCEEEEEEEEECC---CEECC
T ss_pred ---E--EcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCC
Confidence 1 234678999999999999999999999999999985
No 135
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.84 E-value=2.6e-20 Score=181.98 Aligned_cols=192 Identities=18% Similarity=0.161 Sum_probs=144.3
Q ss_pred CceEEEcCCCC--CCeEEEEEEe------------cCcCCe-eeeCCCceEEEcCCeEEEEEEEeccCCCe-EEEEe-CC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE------------ALIKPF-PISEPSDATVLSGSVVEFVCRVGGDPLPT-ILWRR-DD 109 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~-~~~~~~~~~~~~G~~~~L~C~~~~~p~p~-i~W~~-~~ 109 (633)
+++|.|.+++. +|.|+|.+.+ +..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++
T Consensus 50 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~ 129 (289)
T 3ejj_X 50 GSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGG 129 (289)
T ss_dssp CCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGG
T ss_pred ccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCC
Confidence 46899999998 9999999876 444444 56677888899999999999998877665 99986 66
Q ss_pred ccCCCC-CeEEcccceEEEccCCCCCCeEEEEEEE-eCCceEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEe
Q psy15127 110 GKMPTG-RAKILDDRSLQIENVGPQDEGLYICDVE-NLVGSISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECG 184 (633)
Q Consensus 110 ~~i~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~~~-n~~g~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~ 184 (633)
..+..+ +.....++.|.|.+++.+|+|.|+|.+. +..+..+..+.|.|.. .+|.+...+....+.+|+.+.|.|.
T Consensus 130 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~ 209 (289)
T 3ejj_X 130 RQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCS 209 (289)
T ss_dssp EECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEE
T ss_pred eecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEE
Confidence 666543 4555567899999999999999999999 4455567788888884 2377777777777889999999999
Q ss_pred CCCCCCCCeEEEEECCEEeccCCCeeE----EeccceeeeEE----EeeeEEEEeecCCCCC
Q psy15127 185 PPKGQPEPTLHWKKNGQFIDLESSKSL----DLSRRTLGWLR----VRPLYWNVARPRANLN 238 (633)
Q Consensus 185 ~~~~~p~~~i~W~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~g~y~C~a~~~~~~~ 238 (633)
+..+.|.+.+.|++++..+........ ......+.+.. ..|.|+|.|.|..+..
T Consensus 210 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 271 (289)
T 3ejj_X 210 ATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR 271 (289)
T ss_dssp EEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred eCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCc
Confidence 543389999999999988764322111 00111222221 2489999999998743
No 136
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.84 E-value=6.2e-20 Score=170.32 Aligned_cols=170 Identities=19% Similarity=0.229 Sum_probs=128.5
Q ss_pred EEcCCeEEEEEEEecc-CCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy15127 83 VLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENLVGSISLRASLTV 157 (633)
Q Consensus 83 ~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V 157 (633)
...++.+.|.|.+.+. |.+.++|+|+|..+..+ +.....+ ..|.|.+++.+|+|.|+|.+.|..+.....+.|.|
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 3467888899988774 58899999999988764 3333222 35999999999999999999998888777777766
Q ss_pred Ee--------------------eccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccce
Q psy15127 158 HL--------------------LRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRT 217 (633)
Q Consensus 158 ~~--------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 217 (633)
.. .++.+...+....+.+|+.+.|.|. ..|.|.+.+.|++++..+.......+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~-~~g~p~p~v~W~~~~~~~~~~~~~~~~----- 167 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCN-VWGDPPPEVSWLKNEKALAQTDHCNLK----- 167 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEE-EECSSCCEEEEEETTEEECCCSSEEEE-----
T ss_pred eeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEE-EcCCCCceEEEEECCeECccCCCEEEE-----
Confidence 52 2122333455678899999999999 578888889999888766532211000
Q ss_pred eeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE-cc
Q psy15127 218 LGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-TQ 296 (633)
Q Consensus 218 ~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~ 296 (633)
.. ..
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (212)
T 2r15_A 168 ---------------------------------------------------------------------------FEAGR 172 (212)
T ss_dssp ---------------------------------------------------------------------------EETTT
T ss_pred ---------------------------------------------------------------------------EcCCC
Confidence 00 11
Q ss_pred CceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 297 EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 297 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
...|.|.++..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 173 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 173 TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 2379999999999999999999999999999888886
No 137
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.84 E-value=1.4e-19 Score=173.94 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=137.8
Q ss_pred CceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeCCccCC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRDDGKMP 113 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~~i~ 113 (633)
++.|.|.+++. +|.|+|.+.+ +..++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 47 ~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~ 125 (262)
T 3rjd_A 47 TPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK 125 (262)
T ss_dssp SSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred CCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc
Confidence 56799999998 9999999988 33333 3445556778999999999999 677888999999998763
Q ss_pred CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCC
Q psy15127 114 TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPE 191 (633)
Q Consensus 114 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 191 (633)
. ...+..|.|.+++.+|+|.|+|.+.|..+..+..+.|.|... +|.+...+ ...+.+|+.+.|.|. ..+.|.
T Consensus 126 ~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~-~~~~p~ 199 (262)
T 3rjd_A 126 F----FHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCE-TKLLLQ 199 (262)
T ss_dssp E----EEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEE-CCCCCC
T ss_pred c----cCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeE-cccCCC
Confidence 2 123568999999999999999999999988888889999864 24444444 556889999999999 566664
Q ss_pred -C----eEEEEECCEEeccCC-CeeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 192 -P----TLHWKKNGQFIDLES-SKSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 192 -~----~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
+ .+.|++++..+.... ...+.+....... .|.|+|.|.|..+.
T Consensus 200 ~p~~~~~~~w~~~~~~~~~~~~~~~L~i~~v~~~d---~G~Y~C~a~n~~G~ 248 (262)
T 3rjd_A 200 RPGLQLYFSFYMGSKTLRGRNTSSEYQILTARRED---SGLYWCEAATEDGN 248 (262)
T ss_dssp -----EEEEEEETTEEEEEEESCCEEEESSCCGGG---CEEEEEEEEETTSS
T ss_pred CCCccEEEEEEeCCcEecccCCCceEEEEEechhh---CeEEEEEEEcccCc
Confidence 4 478999999876422 2233333332222 58999999998884
No 138
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.83 E-value=5.3e-20 Score=164.26 Aligned_cols=165 Identities=21% Similarity=0.261 Sum_probs=116.8
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccC-CCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDP-LPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.+|.+...|....+.+|+.+.|.|.+.+.| .+.+.|+|++..+... ...+.|.+++.+|+|.|+|.+.+..
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~------~~~~~~~~~~~~d~G~Y~C~~~~~~-- 74 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH------TQPSYRFKANNNDSGEYTCQTGQTS-- 74 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC------CSSEEEEECCGGGCEEEEEEETTSB--
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC------ccceEEEecccccCeEEEEEEeCCC--
Confidence 467888888888899999999999998876 5689999999988653 3467788999999999999998643
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEE
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYW 228 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~ 228 (633)
.+..+.|.|..+ +.+.. +....+.+|+.+.|.|.+..+.|.+.+.|+
T Consensus 75 ~s~~~~l~v~~~-~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~------------------------------- 121 (170)
T 3ry4_A 75 LSDPVHLTVLFE-WLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFF------------------------------- 121 (170)
T ss_dssp CCCCEEEEEECC-SEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEE-------------------------------
T ss_pred ceEeEEEEEECC-ceEec-CCCceeecCCeEEEEEECCCCCCCceEEEE-------------------------------
Confidence 344567777765 32222 223345566666666663233344445554
Q ss_pred EEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCC
Q psy15127 229 NVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKE 308 (633)
Q Consensus 229 C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 308 (633)
++|..+.. ...+..|.|.++..+
T Consensus 122 -----------------------------------------------~~g~~~~~----------~~~~~~L~i~~v~~~ 144 (170)
T 3ry4_A 122 -----------------------------------------------QNGKSQKF----------SHLDPTFSIPQANHS 144 (170)
T ss_dssp -----------------------------------------------ETTEEEEE----------ESSCCEEEESSCCGG
T ss_pred -----------------------------------------------ECCeEccc----------cCCCCeEEEEecccc
Confidence 44443321 113457999999999
Q ss_pred CCeEEEEEEEeCCce-eEEEEEEEE
Q psy15127 309 DAGFFVCSALSVAGS-TTVRAFLQV 332 (633)
Q Consensus 309 d~G~Y~C~a~n~~g~-~~~~~~l~v 332 (633)
|+|.|+|.|.|..|. .+..+.|.|
T Consensus 145 d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 145 HSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999986 344455544
No 139
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.83 E-value=2.2e-20 Score=173.75 Aligned_cols=184 Identities=21% Similarity=0.176 Sum_probs=133.2
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecC-CCCCeEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDL-KPDTSYMFIVR 487 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~~~Y~~~v~ 487 (633)
.|++|..+.+......++.|+|+++... + ...+|.|+|+..+.. .+.........+.++|.+| .+++.|.|+|.
T Consensus 7 pP~~P~~l~~~~~~~~sv~l~W~~p~~~---~-~~~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~ 81 (215)
T 1bqu_A 7 PPEKPKNLSCIVNEGKKMRCEWDGGRET---H-LETNFTLKSEWATHK-FADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 81 (215)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCC---S-SCCEEEEEEEETTEE-CCCEECCSSCTTEEECSSCCCTTSCEEEEEE
T ss_pred CCCCCEeeEeEECCCCcEEEEcCCCCCC---C-CCceEEEEEEEcCCC-ccccccccCCcceEEEcCCccccccEEEEEE
Confidence 4667888888888889999999999854 2 347999999865421 1211112234578999999 99999999999
Q ss_pred EEeccccCCCCCCCCceeecC-CCCCCCcchHHHHHHHhCCceEEeeeeeec--ccceEEEEEEEecCCCcccccchhhh
Q psy15127 488 AENSHGLGIPSPVSPITRTLG-LNSLVPQHLLDEARARLGTKVVNLRELIPT--ASTAVRITWEVSWGSVPQHLLDEARA 564 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~si~v~W~~p~~~~p~~~~~~~~~ 564 (633)
|.|..|.+. +... .+.+.. ..|.+|.++ .+..+ +.+++.|+|++| ...++.
T Consensus 82 A~n~~G~~~-s~~~-~~~~~~~~~p~pP~~~----------------~~~~~~~~~~sv~l~W~~p--------~~~~~~ 135 (215)
T 1bqu_A 82 AENALGKVT-SDHI-NFDPVYKVKPNPPHNL----------------SVINSEELSSILKLTWTNP--------SIKSVI 135 (215)
T ss_dssp EEETTEEEE-CCCE-EECGGGSEECCCCEEE----------------EEECC--CCSCEEEEEECC--------GGGGTS
T ss_pred EEecccCcc-CCcE-EecccccCcCCCCCce----------------EEEEecCCCceEEEEEeCC--------CCCCcc
Confidence 999999986 3222 232222 244444443 55544 779999999965 345788
Q ss_pred hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 565 RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 565 i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.+| .|+|+..+... |...... ......++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 136 i~~Y-~v~y~~~~~~~-------~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~ 194 (215)
T 1bqu_A 136 ILKY-NIQYRTKDAST-------WSQIPPE--DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 194 (215)
T ss_dssp CEEE-EEEEEETTCSS-------CEECCGG--GGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCC
T ss_pred eEEE-EEEEccCCCCC-------ceEeccc--cccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCC
Confidence 9999 99999876433 6533211 1245678999999999999999999999999988764
No 140
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=186.64 Aligned_cols=186 Identities=13% Similarity=0.139 Sum_probs=135.2
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------cCcCC--eeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------ALIKP--FPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRD 108 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p--~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~ 108 (633)
+++|.|.+++. +|.|+|.|.+ +...| .+...+.......|+.+.|.|.+ .|.|.+.|+|+++
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~ 152 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGD 152 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCC
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEEC
Confidence 46799999999 9999999987 22233 33455566666778999999986 5889999999999
Q ss_pred CccCCCCCeEEc-----ccceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEEEEEeeccccccCCC-ceEEecCCcEE
Q psy15127 109 DGKMPTGRAKIL-----DDRSLQIENVGPQDEGLYICDVENLVGS--ISLRASLTVHLLRDDFRAEPK-DTRVASGETAL 180 (633)
Q Consensus 109 ~~~i~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l~V~~~~p~~~~~~~-~~~~~~g~~~~ 180 (633)
+..+........ ..+.|.|.++..+|+|.|+|.|.|..+. .+..+.|.|..+ |.+...+. ...+..|+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~-P~~~~~~~~~~~~~~g~~v~ 231 (308)
T 4fom_A 153 LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYA-PEVSVTGYDGNWFVGRKGVN 231 (308)
T ss_dssp SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEE-EEECCBCCCSCEETTCCSCE
T ss_pred CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecC-CeeEEcccceeeeeccccEE
Confidence 988754322221 1247999999999999999999998765 456677777777 66554443 45667889999
Q ss_pred EEEeCCCCCCCC-eEEEEECCEEeccCCC----eeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 181 LECGPPKGQPEP-TLHWKKNGQFIDLESS----KSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 181 l~C~~~~~~p~~-~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
|.|. +.|.|.+ .+.|+|++..+..... ..+.+..... ...|.|+|.|.|..|.
T Consensus 232 l~C~-~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~---~d~G~Y~C~A~N~~G~ 289 (308)
T 4fom_A 232 LKCN-ADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTF---NYSGVYICKVTNSLGQ 289 (308)
T ss_dssp EECC-EEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCS---CCCSEEEEEEEETTEE
T ss_pred EEEE-EecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCCh---hhCEEEEEEEEeCCCc
Confidence 9999 5888888 7999999877643211 1111111111 2358999999998874
No 141
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.83 E-value=3.9e-19 Score=173.05 Aligned_cols=207 Identities=18% Similarity=0.174 Sum_probs=156.8
Q ss_pred CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCC
Q psy15127 357 LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPR 436 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~ 436 (633)
..+.+.+|.....|.+++.|.|..|... ...+.+... |.+|..+.+.....+++.|+|.++.
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~---------------p~~P~~l~~~~~~~~sv~l~W~~p~-- 129 (283)
T 1tdq_A 68 SQYSVQALRPGSRYEVSISAVRGTNESD-ASSTQFTTE---------------IDAPKNLRVGSRTATSLDLEWDNSE-- 129 (283)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECC-CEEEEEECC---------------CCCCEEEEEEEECSSCEEEEEECCS--
T ss_pred CEEEecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECC---------------CCCCCceEEEecCCCeEEEEecCCC--
Confidence 3456779999999999999999887653 233333322 3457777888888999999999986
Q ss_pred CCCCcceeEEEEEEEEecCCCCeEEEEEeee---eceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCC
Q psy15127 437 GGGVAPVIGYTVEYFSSDLQTGWVVAAHRIT---STSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLV 513 (633)
Q Consensus 437 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~ 513 (633)
+.+.+|.|+|+..+. ..+........ ...++|.+|.|++.|.|+|+|.|..|.|.+.. ..+ ...|.+
T Consensus 130 ----~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~-~t~~~~ 199 (283)
T 1tdq_A 130 ----AEAQEYKVVYSTLAG-EQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT----MNA-RTELDS 199 (283)
T ss_dssp ----SCCSEEEEEEEETTC-CCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE----EEE-ECCCCC
T ss_pred ----CCccEEEEEEEeCCC-CcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE----EEe-cCCCCC
Confidence 368999999988754 34433333334 67899999999999999999999999886532 222 223334
Q ss_pred CcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccce
Q psy15127 514 PQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNM 593 (633)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~ 593 (633)
|.++ .+..++.+++.|+|++| ++.+.+| .|+|+..+... .
T Consensus 200 P~~l----------------~~~~~~~~sv~l~W~~p-----------~~~i~~Y-~v~~~~~~~~~--------~---- 239 (283)
T 1tdq_A 200 PRDL----------------MVTASSETSISLIWTKA-----------SGPIDHY-RITFTPSSGIS--------S---- 239 (283)
T ss_dssp CEEE----------------EEEEECSSCEEEEEECC-----------CSCCSEE-EEEEECSSSCC--------E----
T ss_pred CCcc----------------EEeEecCCEEEEEEeCC-----------CCcccEE-EEEEEcCCCCe--------e----
Confidence 4444 77888899999999942 4789999 99998765432 1
Q ss_pred eEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 594 ATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 594 ~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.+......++++|.+|+|++.|.|+|+|.|..|+|+++
T Consensus 240 -~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 240 -EVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp -EEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred -EEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 22334668899999999999999999999999999986
No 142
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.83 E-value=2.7e-20 Score=170.44 Aligned_cols=128 Identities=22% Similarity=0.268 Sum_probs=91.8
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE---cccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI---LDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|++..+....... ...+.|.|.+++.+|+|.|+|.|.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 3 LPKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 357888888877 7999999999999987 678999999998875422111 23468999999999999999999999
Q ss_pred Cce--EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 146 VGS--ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 146 ~g~--~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
.|. .+..+.|.|... +|.+...+.. .+.+|+.++|.|.+ .+ +.+.+.|+|+|.
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~ 137 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQS-RS-PMDTFLLCKERA 137 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEE-EE-EEEEEEEEETTC
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEec-CC-CCCEEEEEeCCC
Confidence 873 466677777653 2333333332 55677777777763 33 233566666554
No 143
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.83 E-value=1.4e-19 Score=178.69 Aligned_cols=285 Identities=17% Similarity=0.190 Sum_probs=168.1
Q ss_pred CCceEEEcCCeEEEEEEEecc-----CCCeEEEEeCCccCCCCCeEEcc-c---ceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 78 PSDATVLSGSVVEFVCRVGGD-----PLPTILWRRDDGKMPTGRAKILD-D---RSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~-----p~p~i~W~~~~~~i~~~~~~~~~-~---~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
|.+..+..|++++|.|.+.+. |.+.|.|+++|..+..++..... + +.|+|.+++..|+|.|.|.+.+..+.
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 456779999999999999886 56889999999988655332222 2 56999999999999999998766555
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCC-CCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeE
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQ-PEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLY 227 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y 227 (633)
....+.|.|..+ |. ....|.|. ..+. ....+.|...... .. .
T Consensus 87 ~~~~~~l~v~~~-P~-------------~P~~l~c~-~~~~~~~~~~~W~~~~~~-~~-~-------------------- 129 (313)
T 2d9q_B 87 ILDQVELRAGYP-PA-------------IPHNLSCL-MNLTTSSLICQWEPGPET-HL-P-------------------- 129 (313)
T ss_dssp EEEEEEEEECCC-CC-------------CCEEEEEE-EETTTTEEEEEEECCSCC-SS-C--------------------
T ss_pred eEEEEEEccCCC-CC-------------CCccceee-ECCCCccEEEEecCCCCC-CC-c--------------------
Confidence 556666766654 22 23456676 2322 2345556432110 00 0
Q ss_pred EEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCC
Q psy15127 228 WNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQK 307 (633)
Q Consensus 228 ~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 307 (633)
....|.+. +.+. ....
T Consensus 130 ----------------------------~~Y~l~~~------------~~~~------------------------~~~~ 145 (313)
T 2d9q_B 130 ----------------------------TSFTLKSF------------KSRG------------------------NCQT 145 (313)
T ss_dssp ----------------------------CEEEEEEE------------ECCT------------------------TSCS
T ss_pred ----------------------------eeEEEEEE------------ecCC------------------------Cccc
Confidence 00001111 0000 0000
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEE
Q psy15127 308 EDAGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSA 387 (633)
Q Consensus 308 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~ 387 (633)
.....+.|.. ..+.. ...+ ....+.....|.++|.|.|..|.....
T Consensus 146 ~~~~~~~~~~--~~~~~--~~~~-----------------------------~~~~L~~~~~Y~f~V~A~N~~G~~~s~- 191 (313)
T 2d9q_B 146 QGDSILDCVP--KDGQS--HCSI-----------------------------PRKHLLLYQNMGIWVQAENALGTSMSP- 191 (313)
T ss_dssp CCCCEEEECC--CTTCS--EEEE-----------------------------EGGGCCSSSCEEEEEEEEETTEEEECC-
T ss_pred CCcccccCCC--CCCCc--EEEE-----------------------------CccccccceeEEEEEEEECCCCCccCc-
Confidence 0112223321 00110 0011 011356677889999999999975321
Q ss_pred EEEeecCCCCCceecCCCCCCCCCCCCCcEEEEe------eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEE
Q psy15127 388 SLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNT------TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVV 461 (633)
Q Consensus 388 ~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~------~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~ 461 (633)
.+.+... ....|.+|..+.+... ..+.+.|+|++|... +..+++|.|+|+.......|..
T Consensus 192 ~~~~~~~-----------~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~---~~~~l~Y~v~y~~~~~~~~w~~ 257 (313)
T 2d9q_B 192 QLCLDPM-----------DVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPG---LHINQKCELRHKPQRGEASWAL 257 (313)
T ss_dssp CEEECGG-----------GGEECCCCEEEECCC-------CCSCEEEEEECCGGG---TTSCEEEEEEEEESSSCCCCEE
T ss_pred cEEEehh-----------heeccCcCceeEEEEecccccCCCCeEEEEECCCCCC---CceeEEEEEEEccCCCCCCcEE
Confidence 1222111 0123455655544433 467999999998742 3446899999994333456775
Q ss_pred EEEe-eeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCC--ceeecCCCC
Q psy15127 462 AAHR-ITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSP--ITRTLGLNS 511 (633)
Q Consensus 462 ~~~~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~--~~~t~~~~p 511 (633)
.... .....++|.+|.|++.|.|+|+|.|..|.|.+|.++. .++|.+.+|
T Consensus 258 ~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P 310 (313)
T 2d9q_B 258 VGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAA 310 (313)
T ss_dssp EEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC---
T ss_pred cccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCC
Confidence 4322 2456799999999999999999999999998776652 345555443
No 144
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.83 E-value=4.2e-20 Score=169.84 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=130.4
Q ss_pred CCCCcEEEEee--CCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEE
Q psy15127 412 PPAAPVILNTT--RGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAE 489 (633)
Q Consensus 412 ~p~~~~~~~~~--~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~ 489 (633)
+|..+.+..+. .+++.|+|.+|. ++.+.+|.|+|+..+....|...........++|.+|.|++.|.|+|+|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~-----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 76 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ-----PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISI 76 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS-----STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC-----CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEE
Confidence 35566666666 889999999984 56899999999986554567655555557899999999999999999999
Q ss_pred eccccCCCCCCCCceee-----------cCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccc
Q psy15127 490 NSHGLGIPSPVSPITRT-----------LGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHL 558 (633)
Q Consensus 490 n~~G~g~~s~~~~~~~t-----------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~ 558 (633)
|..|.|.++.. .+.| ....|.+++.++ +. ++ ++..++.+++.|+|++|
T Consensus 77 n~~G~~~~~~~--~~~t~~~~~~~~~~~~~~~~~~~p~~~-------~~---~l-~~~~~~~~sv~l~W~~p-------- 135 (201)
T 2ha1_A 77 QQYGHQEVTRF--DFTTTSTSTPVTSNTVTGETTPFSPLV-------AT---SE-SVTEITASSFVVSWVSA-------- 135 (201)
T ss_dssp CTTSCEEEEEE--EEEECCCCCTTCSCCCCCSCCCCCCSC-------SC---CS-SCCCCCSCCEEEECCCS--------
T ss_pred ecccccCceeE--EEecCCCCCCcccccccCCCCCCCCcc-------CC---ce-EEEecCCCeEEEEEeCC--------
Confidence 99999875311 1111 111222222110 00 00 57778899999999943
Q ss_pred cchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 559 LDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 559 ~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.+.+.+| .|.|+...... |. ..+...+..++++|.+|+|++.|.|+|+|.|..|+|++.
T Consensus 136 ---~~~i~~Y-~v~~~~~~~~~-------~~----~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~ 194 (201)
T 2ha1_A 136 ---SDTVSGF-RVEYELSEEGD-------EP----QYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLI 194 (201)
T ss_dssp ---CTTEEEE-EEEEEETTTCC-------CC----EEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEE
T ss_pred ---CCCccEE-EEEEEECCCCC-------ce----eEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccE
Confidence 3589999 99998754432 22 122334678999999999999999999999999999874
No 145
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.83 E-value=7e-20 Score=167.94 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=97.1
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEEcccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKILDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...|. ..+.+|++++|.|.+.+.|. .+.|+|++..+.. ........+.|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 45788888876 47999999999999988765 6999999987732 1111234578999999999999999999998
Q ss_pred C-c--eEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEe
Q psy15127 146 V-G--SISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFI 203 (633)
Q Consensus 146 ~-g--~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~ 203 (633)
. | ..+..+.|.|... +|.+...+ ...+.+|+.++|.|. ..+. .+.+.|+|+|..+
T Consensus 81 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~-~~~~-~~~v~W~k~g~~~ 140 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCD-SQVA-FDGFILCKEGEDE 140 (198)
T ss_dssp TTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEE-CSSC-CSEEEEEEC----
T ss_pred CCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEe-cCCC-CcEEEEEECCCcc
Confidence 7 5 3466788888873 13333333 357889999999999 4565 6799999987754
No 146
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.83 E-value=2.1e-20 Score=187.28 Aligned_cols=221 Identities=15% Similarity=0.168 Sum_probs=152.5
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe------------cCcCCeee--eC
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE------------ALIKPFPI--SE 77 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~--~~ 77 (633)
+.|.+.|.|+.......+.+ ....++. ..+++|.|.+++. +|.|+|.+.| +..+|... ..
T Consensus 51 ~~p~~~v~W~k~~~~~~~~~---~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~ 126 (339)
T 3o4o_C 51 VSPRINLTWHKNDSARTVPG---EEETRMW-AQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFI 126 (339)
T ss_dssp TSSCCBCCCEESSCCSCCSC---CSSSCEE-EETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHH
T ss_pred CCCCceEEEEECCCCcccCc---cccccEE-eeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCcccccc
Confidence 66788888654332111111 1123443 5678999999998 9999999998 22222110 11
Q ss_pred CCceEEEcCCeEEEEEE-----EeccCCCeEEEEeCCccCCCC--CeEEccc-ceEEEccCCCCCCeEEEEEEEeCCc--
Q psy15127 78 PSDATVLSGSVVEFVCR-----VGGDPLPTILWRRDDGKMPTG--RAKILDD-RSLQIENVGPQDEGLYICDVENLVG-- 147 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~-----~~~~p~p~i~W~~~~~~i~~~--~~~~~~~-~~L~i~~v~~~d~G~Y~C~~~n~~g-- 147 (633)
.....+.+|+.+.|.|. +.+.|.+.+.|+|++..+... +.....+ +.|.|.+++.+|+|.|+|.|.|..|
T Consensus 127 ~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 206 (339)
T 3o4o_C 127 SYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQ 206 (339)
T ss_dssp CEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTB
T ss_pred ccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCe
Confidence 12346889999999999 788899999999999988654 3333333 5899999999999999999999876
Q ss_pred --eEEEEEEEEEEee----ccccccCCCceEEecCCcEEEEEeCC--CCCC-CCeEEEEECCEEeccCCC-------eeE
Q psy15127 148 --SISLRASLTVHLL----RDDFRAEPKDTRVASGETALLECGPP--KGQP-EPTLHWKKNGQFIDLESS-------KSL 211 (633)
Q Consensus 148 --~~s~~~~l~V~~~----~p~~~~~~~~~~~~~g~~~~l~C~~~--~~~p-~~~i~W~~~~~~~~~~~~-------~~~ 211 (633)
..+..+.|.|... +|.+...+....+.+|+.+.|.|.+. .|.| .+.+.|++++..+..... ...
T Consensus 207 ~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~ 286 (339)
T 3o4o_C 207 QYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQ 286 (339)
T ss_dssp CCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCE
T ss_pred EEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceE
Confidence 4677888888753 25566666667889999999999942 7888 889999999987643211 011
Q ss_pred Eec-cc------eeeeE----EEe-eeEEEEeecCCCCC
Q psy15127 212 DLS-RR------TLGWL----RVR-PLYWNVARPRANLN 238 (633)
Q Consensus 212 ~~~-~~------~~~~~----~~~-g~y~C~a~~~~~~~ 238 (633)
... .+ .|.+. ... |.|+|.|.|..|..
T Consensus 287 ~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~ 325 (339)
T 3o4o_C 287 EYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQ 325 (339)
T ss_dssp ECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEE
T ss_pred EecccCceEEEEEEEEEEechhhcCccEEEEEEeccCce
Confidence 111 11 22222 123 78999999998854
No 147
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.83 E-value=6.1e-20 Score=168.02 Aligned_cols=130 Identities=20% Similarity=0.266 Sum_probs=90.5
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe---EEcccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA---KILDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|++..+..... ....++.|.|.+++.+|+|.|+|.|.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 467888888874 7999999999999987765 9999999987753211 1223568999999999999999999998
Q ss_pred CceE--EEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEe
Q psy15127 146 VGSI--SLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFI 203 (633)
Q Consensus 146 ~g~~--s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~ 203 (633)
.|.. +..+.|.|... +|.+...+ ...+.+|+.++|.|. ..+.| +.+.|+|+|..+
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~-~~~~p-~~~~W~k~g~~~ 139 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCG-SRLRF-DRFILTEEGDHK 139 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC------------CEEEEE-ESSCC-SEEEEEEC---C
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEE-cCCCC-CEEEEEccCCcc
Confidence 7642 56677888763 24444333 357889999999999 56767 889999987654
No 148
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.82 E-value=1.4e-18 Score=172.31 Aligned_cols=123 Identities=15% Similarity=0.170 Sum_probs=89.1
Q ss_pred cCCEEEEEEEEcCCcceeE-EEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEee--CCeEEEEeCCCCCCCCCCcce
Q psy15127 367 TDSGLYTCTASSESGETSW-SASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTT--RGSVTLGWGEPEPRGGGVAPV 443 (633)
Q Consensus 367 ~d~g~y~c~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~--~~~i~l~W~~~~~~~~~~~~i 443 (633)
...|.|+|.|.|..|.... ...+.+.. ...|.+|..+.+.... ++++.|+|++|.... .++.+
T Consensus 166 ~~~Y~f~v~A~N~~G~~~s~~~~~~~~~-------------~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~-~~~~~ 231 (325)
T 1n26_A 166 SSFYIVSMCVASSVGSKFSKTQTFQGCG-------------ILQPDPPANITVTAVARNPRWLSVTWQDPHSWN-SSFYR 231 (325)
T ss_dssp CCEEEEEEEEEETTEEEECCCEEEETTT-------------CBCCCCCEEEEEEECTTCTTCEEEEEECCTTCC-CSSSC
T ss_pred CcEEEEEEEEEcCCCCcccCcEEEeecc-------------ccCCCCCcceEEEEecCCCCEEEEEECCCCccC-CCcEe
Confidence 3467888999999997532 22222111 1235667777666654 368999999998642 24678
Q ss_pred eEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCce
Q psy15127 444 IGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPIT 504 (633)
Q Consensus 444 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~ 504 (633)
..|.|+|+..+ ...|...........++|.+|.|++.|.|+|+|.|..|.|.+|.++...
T Consensus 232 ~~Y~V~yr~~~-~~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~ 291 (325)
T 1n26_A 232 LRFELRYRAER-SKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEA 291 (325)
T ss_dssp EEEEEEEEETT-CSCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCE
T ss_pred EEEEEEEEeCC-CCCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCcc
Confidence 99999999875 3567765444456789999999999999999999999999999877433
No 149
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.82 E-value=5.4e-20 Score=170.97 Aligned_cols=130 Identities=16% Similarity=0.178 Sum_probs=95.5
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE---cccc--eEEEccCCCCCCeEEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI---LDDR--SLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~---~~~~--~L~i~~v~~~d~G~Y~C~~~ 143 (633)
..+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....... .... .|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 46788888887 57999999999999976 678999999988764321111 2235 89999999999999999999
Q ss_pred eCCce--EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEE
Q psy15127 144 NLVGS--ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQF 202 (633)
Q Consensus 144 n~~g~--~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~ 202 (633)
|..+. .+..+.|.|... +|.+...+ ...+.+|+.++|.|. ..+.|.+.+.|+|+|..
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~-~~~~~~~~~~W~k~g~~ 145 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCS-SAHIPFDRFSLAKEGEL 145 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEE-CSSSCCSEEEEEETTCS
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEe-CCCCCCCEEEEEECCCc
Confidence 98654 345577777752 24444444 456788999999996 35556677888877653
No 150
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.82 E-value=6.2e-20 Score=182.81 Aligned_cols=228 Identities=14% Similarity=0.144 Sum_probs=142.3
Q ss_pred cccCCCCCCCCCCccccccceee--EEEEecccCCCCCceEE--------eeCceEEEcCCCC--CCeEEEEEEec----
Q psy15127 5 LDTNHAHPMSSPRAEIEPATRTN--RVSISGDPGFDSRRSRS--------IFGSVLGARGALS--DDQWKLIAKEA---- 68 (633)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~L~i~~v~~--~G~Y~C~a~~v---- 68 (633)
+.+.|......|.+.|+|+.... ...+.........|+.. ..+++|.|.+++. +|.|+|.|.|.
T Consensus 21 v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 100 (327)
T 2wng_A 21 AILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPD 100 (327)
T ss_dssp EEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTC
T ss_pred EEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcc
Confidence 34455544444667888665321 11111000011234443 2346799999998 99999999871
Q ss_pred -------------CcC---CeeeeCCCceEEEcCCeEEEEEEEeccCCC--eEEEEeCCccCCCCCeEEc---------c
Q psy15127 69 -------------LIK---PFPISEPSDATVLSGSVVEFVCRVGGDPLP--TILWRRDDGKMPTGRAKIL---------D 121 (633)
Q Consensus 69 -------------~~~---p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p--~i~W~~~~~~i~~~~~~~~---------~ 121 (633)
..+ |.+ ..| ...+.+|+.+.|.|.+.+.|.+ .++|+|+|..+........ .
T Consensus 101 ~~~~~~~~~~l~V~~~p~~p~i-~~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~ 178 (327)
T 2wng_A 101 TEFKSGAGTELSVRAKPSAPVV-SGP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSI 178 (327)
T ss_dssp EEEEECCCEEEEEEBCCCCCEE-ECC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEE
T ss_pred eeEeecCcEEEEEEecCCCcee-ecc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEE
Confidence 111 222 222 3567899999999999988766 8999999998865432211 1
Q ss_pred cceEEEccCCCCCCeEEEEEEEeCCce---EEEEEEE--EEEeeccccccCCCceEEecCCcEEEEEeCCCC-CCCC-eE
Q psy15127 122 DRSLQIENVGPQDEGLYICDVENLVGS---ISLRASL--TVHLLRDDFRAEPKDTRVASGETALLECGPPKG-QPEP-TL 194 (633)
Q Consensus 122 ~~~L~i~~v~~~d~G~Y~C~~~n~~g~---~s~~~~l--~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~-~i 194 (633)
...|.|.....+|+|.|+|.|.|..+. ....+.+ .+..+ |.+...+.. +.+|+.+.|.|.+ .| .|++ .|
T Consensus 179 ~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~-P~i~~~~~~--~~~G~~v~l~C~~-~g~~p~~~~v 254 (327)
T 2wng_A 179 HSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVP-PTLEVTQQP--VRAENQVNVTCQV-RKFYPQRLQL 254 (327)
T ss_dssp EEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBC-CEEEEEEEC--CSSTTCCEEEEEE-EEEBSSCEEE
T ss_pred EEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCC-CEEEEecCC--cCCCCcEEEEEEE-ccccCCCcEE
Confidence 235788877778889999999998765 2334444 23344 555444333 6799999999995 56 4555 89
Q ss_pred EEEECCEEeccCCCeeE-Eeccc------eeeeE----EEeeeEEEEeecCCCCC
Q psy15127 195 HWKKNGQFIDLESSKSL-DLSRR------TLGWL----RVRPLYWNVARPRANLN 238 (633)
Q Consensus 195 ~W~~~~~~~~~~~~~~~-~~~~~------~~~~~----~~~g~y~C~a~~~~~~~ 238 (633)
.|+++|..+........ ..... .+.+. ...|.|+|.|.|.++..
T Consensus 255 ~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 255 TWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 99999998864321111 11111 12221 24689999999998755
No 151
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.82 E-value=1.1e-19 Score=181.43 Aligned_cols=192 Identities=13% Similarity=0.135 Sum_probs=141.6
Q ss_pred CceEEe----eCceEEEcCCCC--CCeEEEEEEe-------------cCcCCee--eeCCCceEEEcC---CeEEEEEE-
Q psy15127 40 RRSRSI----FGSVLGARGALS--DDQWKLIAKE-------------ALIKPFP--ISEPSDATVLSG---SVVEFVCR- 94 (633)
Q Consensus 40 ~~~~~~----~~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~--~~~~~~~~~~~G---~~~~L~C~- 94 (633)
.|+.+. .+++|.|.+++. +|.|+|.+.+ +..+|.+ ...+..+.+.+| +.+.|.|.
T Consensus 80 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~ 159 (331)
T 3u83_A 80 ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTS 159 (331)
T ss_dssp TTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEE
T ss_pred CceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEe
Confidence 455543 357899999999 9999999543 4556665 335667788888 88999998
Q ss_pred EeccCCCeEEEEeCCccCCC------CCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeecccccc-C
Q psy15127 95 VGGDPLPTILWRRDDGKMPT------GRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRA-E 167 (633)
Q Consensus 95 ~~~~p~p~i~W~~~~~~i~~------~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~-~ 167 (633)
+.+.|.+.++|++++..... ..........|.|.++..+|+|.|+|.|.|..+..+..+.|.|..+ |.+.. .
T Consensus 160 ~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~-P~~~~~~ 238 (331)
T 3u83_A 160 ANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE-PEVTIEG 238 (331)
T ss_dssp EEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE-EEEEEEC
T ss_pred cCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC-CeEEEec
Confidence 78899999999996432211 1111112246889999999999999999999999999999999888 55553 4
Q ss_pred CCceEEecCCcEEEEEeCCCCCCCCe-EEEEECCEEeccCCCeeEEeccceeeeE-EE----eeeEEEEeecCCCC
Q psy15127 168 PKDTRVASGETALLECGPPKGQPEPT-LHWKKNGQFIDLESSKSLDLSRRTLGWL-RV----RPLYWNVARPRANL 237 (633)
Q Consensus 168 ~~~~~~~~g~~~~l~C~~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~g~y~C~a~~~~~~ 237 (633)
+....+.+|+.+.|.|. ..+.|.+. +.|++++..+.... ......+.+. .+ .|.|+|.|.|..+.
T Consensus 239 ~~~~~~~~g~~~~l~C~-~~g~p~p~~i~W~~~~~~~~~~~----~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~ 309 (331)
T 3u83_A 239 FDGNWYLQRMDVKLTCK-ADANPPATEYHWTTLNGSLPKGV----EAQNRTLFFKGPINYSLAGTYICEATNPIGT 309 (331)
T ss_dssp CCSCCBTTCCCEEEEEE-EEEESCCCEEEEEETTBSCCTTE----EEETTEEEECSCCCGGGCEEEEEEEEETTEE
T ss_pred CCCceEeCCCeEEEEEe-CcCCCCCCEEEEEECCCcccccc----eecCcEEEEeCCCccccCeEEEEEEEecccc
Confidence 44556889999999999 58889887 99999998765431 1122333333 22 48999999998774
No 152
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.82 E-value=2.3e-19 Score=165.93 Aligned_cols=172 Identities=19% Similarity=0.269 Sum_probs=123.8
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC--------------------CCCeEEcccceEEEccCCCCC
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP--------------------TGRAKILDDRSLQIENVGPQD 134 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~--------------------~~~~~~~~~~~L~i~~v~~~d 134 (633)
...+....+.+|+.++|.|.+.+.+.+.+.|++++.... .++.....++.|.|.+++.+|
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D 82 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKD 82 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGG
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccC
Confidence 344556779999999999998888888999999754221 234455556789999999999
Q ss_pred CeEEEEEEEeCC-ceEEEEEEEEEEeecc--ccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeE
Q psy15127 135 EGLYICDVENLV-GSISLRASLTVHLLRD--DFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSL 211 (633)
Q Consensus 135 ~G~Y~C~~~n~~-g~~s~~~~l~V~~~~p--~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 211 (633)
+|.|+|.+.+.. +..+..+.|.|..+++ .+...+.. +.+|+.+.|.|. ..+.| +.+.|++++..+....
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~-~~~~p-p~i~W~~~g~~l~~~~---- 154 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCL-SNDIG-ANIQWLFNSQSLQLTE---- 154 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEE-CSCTT-CEEEEEETTEECCCCS----
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEE-CCCCC-CceEEEECCEeCCCCC----
Confidence 999999999985 5577888888876532 22222222 777888888888 45544 6777777766553211
Q ss_pred EeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccce
Q psy15127 212 DLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGH 291 (633)
Q Consensus 212 ~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~ 291 (633)
+
T Consensus 155 -------------------------------------------------------------------------------~ 155 (208)
T 3r4d_A 155 -------------------------------------------------------------------------------R 155 (208)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred EEE-ccCceEEEcCCCCCCCeEEEEEEEeCCceeE-EEEEEEEE
Q psy15127 292 LHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVR 333 (633)
Q Consensus 292 ~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 333 (633)
... ..++.|.|.++..+|.|.|+|.|.|..|... ..+.|.|.
T Consensus 156 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 156 MTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp EEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred eEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 111 1336899999999999999999999999864 34455544
No 153
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.82 E-value=6.9e-20 Score=164.08 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=64.3
Q ss_pred ceEEEcCCeEEEEEEEec--cCCCeEEEEeCCccC-----------CCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 80 DATVLSGSVVEFVCRVGG--DPLPTILWRRDDGKM-----------PTGRAKILDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~--~p~p~i~W~~~~~~i-----------~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
.+.+.+|++++|.|...+ .+.+.|.|+|++..+ ..++..+..++.|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 467899999999995433 556789999998643 2345566667789999999999999999999998
Q ss_pred ceE--EEEEEEEEEee
Q psy15127 147 GSI--SLRASLTVHLL 160 (633)
Q Consensus 147 g~~--s~~~~l~V~~~ 160 (633)
|.. +..+.|.|..+
T Consensus 85 g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 85 GTRILNKALDLRILEM 100 (176)
T ss_dssp CCEEEEEEEEEEEECC
T ss_pred CCEEEEEEEEEEEeCC
Confidence 886 66777777764
No 154
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=5e-19 Score=160.15 Aligned_cols=165 Identities=19% Similarity=0.302 Sum_probs=123.8
Q ss_pred eEEEcCCeEEEEEEEeccCCC--eEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 81 ATVLSGSVVEFVCRVGGDPLP--TILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 81 ~~~~~G~~~~L~C~~~~~p~p--~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
..+.+|+.++|.|.+.+.|.| .+.|+|++..+...... .....|.|. +.+|+|.|+|.+.|.. +..+.|.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l~V~ 81 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANIQLH 81 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEEEEC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-CCcEEEEEe--chhhCeEEEEEEECCc---CcEEEEEEe
Confidence 457899999999999887777 89999999887654321 112356665 6899999999999832 356788888
Q ss_pred eeccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEEEE---CCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecC
Q psy15127 159 LLRDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHWKK---NGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPR 234 (633)
Q Consensus 159 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~ 234 (633)
.+ |.+...+....+.+|+.+.|.|. ..+.| .+.+.|++ ++..+.....
T Consensus 82 ~~-P~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~~i~W~~~~~~~~~~~~~~~-------------------------- 133 (184)
T 3b5h_A 82 GP-PRVKAVKSSEHINEGETAMLVCK-SESVPPVTDWAWYKITDSEDKALMNGS-------------------------- 133 (184)
T ss_dssp CS-CCCEESCSEEEECTTSCEEEEEE-CCCSSCCCEEEEEECCSSSCEECCTTG--------------------------
T ss_pred cC-CceeecCCCcEEcCCCcEEEEEE-ECCCCCCCeEEEEEcCCCCCEEeecCC--------------------------
Confidence 77 78777777778899999999999 57777 78999998 3332211000
Q ss_pred CCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEE---ccCceEEEcCCC-CCCC
Q psy15127 235 ANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV---TQEGTLRIQGVQ-KEDA 310 (633)
Q Consensus 235 ~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~---~~~~~l~i~~~~-~~d~ 310 (633)
..++.+ .....|.|.++. .+|.
T Consensus 134 ------------------------------------------------------~~~~~~~~~~~~~~L~i~~v~~~~d~ 159 (184)
T 3b5h_A 134 ------------------------------------------------------ESRFFVSSSQGRSELHIENLNMEADP 159 (184)
T ss_dssp ------------------------------------------------------GGTEEEEEETTEEEEEECSCCTTTSS
T ss_pred ------------------------------------------------------CCEEEEEecCCeeEEEEeeccccccC
Confidence 001111 122379999999 8999
Q ss_pred eEEEEEEEeCCceeEEEEEEEEE
Q psy15127 311 GFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 311 G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
|.|+|.|.|..|.....+.|.|.
T Consensus 160 G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 160 GQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEC
T ss_pred ceEEEEEEeCCCcceEEEEEEEe
Confidence 99999999999999998888875
No 155
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.82 E-value=2.1e-18 Score=160.41 Aligned_cols=175 Identities=21% Similarity=0.361 Sum_probs=125.2
Q ss_pred EEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cCceEEEcCCCCCCCeEEEEEEEeCCceeEE
Q psy15127 250 LIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 326 (633)
Q Consensus 250 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 326 (633)
+.+..|+.+.|.|.+.|.|.+.+.|+++|..+... ...++.+. ..+.|.|.++..+|.|.|+|.|.|..|..+.
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 104 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSS---NYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 104 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCEEEEEETTEESSCS---SSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEE
T ss_pred EEEECCCCEEEEEEEeecCCCEEEEEECCeECCCC---CCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEE
Confidence 66778999999999999999999999999876421 11222222 2446777777777777777777777766555
Q ss_pred EEEEEEEecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCC
Q psy15127 327 RAFLQVREFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDS 406 (633)
Q Consensus 327 ~~~l~v~~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~ 406 (633)
.+.|.|. ..|
T Consensus 105 ~~~l~v~-----------------------------------------------------------~~P----------- 114 (215)
T 3mtr_A 105 EFILVQA-----------------------------------------------------------DTP----------- 114 (215)
T ss_dssp EEEEEEC-----------------------------------------------------------CCC-----------
T ss_pred EEEEEEC-----------------------------------------------------------CCC-----------
Confidence 5444443 222
Q ss_pred CCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeee----eceEEEecCCCCCeE
Q psy15127 407 GLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRIT----STSITVSDLKPDTSY 482 (633)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~----~~~~~i~~L~p~~~Y 482 (633)
.+|..+.. ......+.|+|.++...+ +.++..|.|+|+..+. ..|........ ...++|.+|.+++.|
T Consensus 115 ----~~p~~~~~-~~~~~~~~l~w~~p~~~~--~~pi~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 115 ----SSPSIDQV-EPYSSTAQVQFDEPEATG--GVPILKYKAEWRAVGE-EVWHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp ----CCCEEEEE-EEETTEEEEEEECCSCCC--SSCEEEEEEEEEETTC-CCCEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred ----CCCcceEE-EEecceEEEEEecCCccC--CCceEEEEEEEEECCC-CcccccccccccccccccEEECCCCCCCEE
Confidence 22333333 345678999999877553 6789999999998764 46665433322 278999999999999
Q ss_pred EEEEEEEeccccCCCCCCCCceee
Q psy15127 483 MFIVRAENSHGLGIPSPVSPITRT 506 (633)
Q Consensus 483 ~~~v~a~n~~G~g~~s~~~~~~~t 506 (633)
.|+|.|.|.+|.|.+|... .++|
T Consensus 187 ~~~~~A~N~~G~s~~S~~~-~v~T 209 (215)
T 3mtr_A 187 AVRLAALNGKGLGEISAAS-EFKT 209 (215)
T ss_dssp EEEEEEEESSCBCCCCCCE-EEEC
T ss_pred EEEEEEEeCCcccCcccce-eeEe
Confidence 9999999999999998766 3555
No 156
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.82 E-value=4.1e-19 Score=160.96 Aligned_cols=171 Identities=16% Similarity=0.177 Sum_probs=130.4
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|++|..+.+...+.+++.|+|.++. +.+.+|.|+|+..+ ..+...........++|.+|.|++.|.|+|+|
T Consensus 6 ~p~~P~~l~~~~~~~~sv~l~W~~p~------~~i~~Y~v~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 6 DLDNPKDLEVSDPTETTLSLRWRRPV------AKFDRYRLTYVSPS--GKKNEMEIPVDSTSFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp --CCCEEEEEESCCSSEEEEEEECCS------SCCSEEEEEEECTT--CCEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred CCcCCCceEEEecCCCEEEEEEeCCC------CCccEEEEEEEeCC--CCeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence 36678888888889999999999985 36889999998543 34443334445688999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.+.+... .+.| .|.+|.++ ++..++.+++.|+|++| .+.+.+|
T Consensus 78 ~~~~~~s~~~~~--~~~t---~p~~P~~l----------------~~~~~~~~sv~l~W~~p-----------~~~i~~Y 125 (186)
T 1qr4_A 78 EKGRHKSKPTTI--KGST---VVGSPKGI----------------SFSDITENSATVSWTPP-----------RSRVDSY 125 (186)
T ss_dssp ESSSCBCCCEEE--EEEC---CCCCCSCE----------------EEESCCSSCEEEEECCC-----------SSCCSEE
T ss_pred EcCCccCCCEEE--EEEC---CCCCCCcc----------------EEEEeCCCEEEEEEECC-----------CCcccEE
Confidence 998777654322 2333 24445455 77888999999999943 2579999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.|.|+..+... |. .+...+..++++|.+|+|++.|.|+|+|.|..|+|+|.
T Consensus 126 -~v~~~~~~~~~-------~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 176 (186)
T 1qr4_A 126 -RVSYVPITGGT-------PN-----VVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI 176 (186)
T ss_dssp -EEEEEETTCCC-------CE-----EEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred -EEEEEeCCCCC-------ce-----EEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE
Confidence 99999876543 11 22344568999999999999999999999999999874
No 157
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.82 E-value=4.9e-19 Score=193.30 Aligned_cols=219 Identities=20% Similarity=0.214 Sum_probs=152.7
Q ss_pred cccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCC-CCcEEEEeeCCeEEEEeCCCCCCCCCCcce
Q psy15127 365 RETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPP-AAPVILNTTRGSVTLGWGEPEPRGGGVAPV 443 (633)
Q Consensus 365 ~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p-~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i 443 (633)
.....|.+.| +.|..|..-......+.. .|.+| ..+.+...+.+++.|+|.++...+ +.++
T Consensus 131 d~~c~g~~~C-c~n~cG~~C~~P~~~~~~---------------~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~--~~~i 192 (680)
T 1zlg_A 131 DNECSGVKKC-CSNGCGHTCQVPKTLYKG---------------VPLKPRKELRFTELQSGQLEVKWSSKFNIS--IEPV 192 (680)
T ss_pred cccCCCcccc-ccccccccccccceeeec---------------ccccccccceEEeccCceEEEEEeCCCCCC--CCCE
Confidence 3456778888 566677643222222222 24557 688888899999999999986432 4567
Q ss_pred eEEEEEEEEecC-------CCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecC--CCCCCC
Q psy15127 444 IGYTVEYFSSDL-------QTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLG--LNSLVP 514 (633)
Q Consensus 444 ~~Y~v~~~~~~~-------~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~--~~p~~~ 514 (633)
. |.|+|+.... ...|..... .....++|.+|.|++.|.|+|.|.|..|.+.++.....++|.. .+|.+|
T Consensus 193 ~-Y~V~~r~~~g~~~~~~~~~~w~~v~~-~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P 270 (680)
T 1zlg_A 193 I-YVVQRRWNYGIHPSEDDATHWQTVAQ-TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAP 270 (680)
T ss_pred E-EEEEEEECCCCCcCccccCceEEEEe-cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCC
Confidence 7 9999997632 146765433 3567899999999999999999999999443333333456644 355566
Q ss_pred cchHHHHHHHhCCceEEeeeeeec--ccc---eEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeee
Q psy15127 515 QHLLDEARARLGTKVVNLRELIPT--AST---AVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWE 589 (633)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~---si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~ 589 (633)
.++ ++..+ +.+ +|.|+|++| ...++.|.+| .|+|+.............|.
T Consensus 271 ~~l----------------~~~~~~~~~~g~~sv~l~W~pP--------~~~~g~i~~Y-~V~~~~~~~~~~~~~~~~~~ 325 (680)
T 1zlg_A 271 ANL----------------RLANSTVNSDGSVTVTIVWDLP--------EEPDIPVHHY-KVFWSWMVSSKSLVPTKKKR 325 (680)
T ss_pred Cce----------------EeeeeeecCCCceEEEEEecCC--------CCCCCceeEE-EEEEEecccccccCCccceE
Confidence 555 66666 778 999999965 3467999999 99998321111001112354
Q ss_pred ccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 590 KYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 590 ~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
. ....+..++++|.+|+|++.|.|+|.|.|..|.|++|+
T Consensus 326 ~-----~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~ 364 (680)
T 1zlg_A 326 R-----KTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKS 364 (680)
T ss_pred E-----EEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCC
Confidence 2 22345678999999999999999999999999998874
No 158
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=4.1e-19 Score=163.41 Aligned_cols=173 Identities=20% Similarity=0.194 Sum_probs=119.7
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCC-----CeEEEEeCCccC-C-CCCeEEccc------ceEEEccCCCCCCeEEEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPL-----PTILWRRDDGKM-P-TGRAKILDD------RSLQIENVGPQDEGLYIC 140 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~-----p~i~W~~~~~~i-~-~~~~~~~~~------~~L~i~~v~~~d~G~Y~C 140 (633)
+...+..+.+.+|+++.|.|.+.+.|. +.+.|+|++..+ . .++.....+ ..|.|.+++.+|+|.|+|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 445556788999999999999998876 789999944433 2 234444332 689999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeee
Q psy15127 141 DVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGW 220 (633)
Q Consensus 141 ~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 220 (633)
.+.|..+..+..+.|.|..+ +. .|. ..+
T Consensus 85 ~~~~~~~~~~~~~~l~V~~~-~~---~p~-~~~----------------------------------------------- 112 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVKAS-YM---RID-TRI----------------------------------------------- 112 (202)
T ss_dssp EEEETTEEEEEEEEEEEEBC-CC---CEE-EEE-----------------------------------------------
T ss_pred EEEeCCCcceEEEEEEecCC-CC---ccc-EEE-----------------------------------------------
Confidence 99999888888888888765 21 000 000
Q ss_pred EEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCc--
Q psy15127 221 LRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG-- 298 (633)
Q Consensus 221 ~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~-- 298 (633)
.....|+.+.|.|.+.|.|.|.+.|++++..+. .......++
T Consensus 113 -----------------------------~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~-------~~~~~~~~~~~ 156 (202)
T 3bp6_B 113 -----------------------------LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPAN-------TSHIRTPEGLY 156 (202)
T ss_dssp -----------------------------EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCE-------EEEEECTTSCE
T ss_pred -----------------------------EecCCCCeEEEEEEccccCCceEEEEeCCCCcc-------CceeeCCCCCE
Confidence 011234666777777777777777777665332 111122222
Q ss_pred -eEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 299 -TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 299 -~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
.+.+..+..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 157 ~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 157 QVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 356678888999999999999999999888887754
No 159
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.82 E-value=1.8e-18 Score=168.87 Aligned_cols=210 Identities=16% Similarity=0.220 Sum_probs=157.9
Q ss_pred CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCC
Q psy15127 357 LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPR 436 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~ 436 (633)
..+.+.+|.....|.|++.|.|..|...... ..+...+. +.+|..+.+.....+++.|+|.++.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t~~~-------------~~~P~~l~~~~~~~~sv~l~W~~p~-- 137 (290)
T 3r8q_A 74 SSVVVSGLMVATKYEVSVYALKDTLTSRPAQ-GVVTTLEN-------------VSPPRRARVTDATETTITISWRTKT-- 137 (290)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEECCCC-------------CCCCEEEEEEEECSSCEEEEEECCS--
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCCCCCcc-eeEecCCC-------------CCCCceeEEEEcCCCeEEEEEeCCC--
Confidence 3557789999999999999999998764432 22222211 2457777788888999999999974
Q ss_pred CCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcc
Q psy15127 437 GGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQH 516 (633)
Q Consensus 437 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~ 516 (633)
+.+.+|.|+|+..+....+. .........++|.+|.|++.|.|+|+|.|..|.|.+... ...| .|.+|.+
T Consensus 138 ----~~~~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~--~~~t---~p~~P~~ 207 (290)
T 3r8q_A 138 ----ETITGFQVDAVPANGQTPIQ-RTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVI--DAST---AIDAPSN 207 (290)
T ss_dssp ----CCCCEEEEEEEESSSCCCEE-EEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEE--EEEC---CCCCCEE
T ss_pred ----CcccEEEEEEEECCCCcceE-EecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEE--EecC---CCCCCCc
Confidence 47899999999876443333 334445678999999999999999999999999875422 1223 3445555
Q ss_pred hHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEe
Q psy15127 517 LLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATV 596 (633)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~ 596 (633)
+ .+..++.+++.|+|++| .+.+.+| .|+|+..+... |... .
T Consensus 208 l----------------~~~~~~~~sv~l~W~~p-----------~~~~~~Y-~v~~~~~~~~~-------~~~~----~ 248 (290)
T 3r8q_A 208 L----------------RFLATTPNSLLVSWQPP-----------RARITGY-IIKYEKPGSPP-------REVV----P 248 (290)
T ss_dssp E----------------EEEEEETTEEEEEEECC-----------SSCCCEE-EEEEECTTSCC-------EECS----S
T ss_pred c----------------EEEeeCCCEEEEEEeCC-----------CCcccEE-EEEEEeCCCCc-------ceeE----e
Confidence 5 77788999999999954 1589999 99999876543 3211 1
Q ss_pred ecCCccceEEeeccccceeEEEEEecccccccccc
Q psy15127 597 MNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 597 ~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
...+..++++|.+|+|++.|.|+|+|.|..|.|+|
T Consensus 249 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 249 RPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp CCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 13356889999999999999999999999999987
No 160
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=2.5e-19 Score=170.87 Aligned_cols=131 Identities=21% Similarity=0.359 Sum_probs=98.9
Q ss_pred eeeCCCceEEEcCCeEEEEEEEec---cCCCeEEEEeCCccCC-------------------------------CCCeEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGG---DPLPTILWRRDDGKMP-------------------------------TGRAKI 119 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~---~p~p~i~W~~~~~~i~-------------------------------~~~~~~ 119 (633)
+...+..+.+.+|++++|.|.+.+ .|.+.|.|+|++.... .++..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 445566788999999999999987 7888999999875431 122222
Q ss_pred cc--cceEEEccCCCCCCeEEEEEEEeCCce-----EEEEEEEEEEee--cccccc-CCCceEEecCCcEEEEEeCCCCC
Q psy15127 120 LD--DRSLQIENVGPQDEGLYICDVENLVGS-----ISLRASLTVHLL--RDDFRA-EPKDTRVASGETALLECGPPKGQ 189 (633)
Q Consensus 120 ~~--~~~L~i~~v~~~d~G~Y~C~~~n~~g~-----~s~~~~l~V~~~--~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~ 189 (633)
.. +..|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|..+ ++.+.. .+....+.+|+.+.|.|. ..+.
T Consensus 85 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~-~~g~ 163 (250)
T 2fbo_J 85 ANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCP-CTDC 163 (250)
T ss_dssp SCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCC-EESC
T ss_pred ccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEE-ecCC
Confidence 22 358999999999999999999987664 366788888764 233333 344566778999999999 5788
Q ss_pred CCCeEEEEECCEEecc
Q psy15127 190 PEPTLHWKKNGQFIDL 205 (633)
Q Consensus 190 p~~~i~W~~~~~~~~~ 205 (633)
|.+.|.|++++..+..
T Consensus 164 p~p~v~W~k~~~~~~~ 179 (250)
T 2fbo_J 164 ANANVTWYTGPTFFEN 179 (250)
T ss_dssp TTCEEEEEEEEECSSC
T ss_pred CCCeeEEEeCCCcccc
Confidence 8889999999876643
No 161
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.81 E-value=1.6e-18 Score=189.18 Aligned_cols=231 Identities=16% Similarity=0.146 Sum_probs=158.1
Q ss_pred ceEEecccccCCEEEEEEEEcCCcce---eEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEe--eCC---eEEEE
Q psy15127 358 RRIACDLRETDSGLYTCTASSESGET---SWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNT--TRG---SVTLG 429 (633)
Q Consensus 358 ~~~i~~~~~~d~g~y~c~a~n~~g~~---~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~--~~~---~i~l~ 429 (633)
.+.+.+|.....|.|++.|.|..|.. +....+.....+ ..|++|..+.+... +.+ ++.|+
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~------------~pp~~P~~l~~~~~~~~~~g~~sv~l~ 291 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDP------------SAPPAPANLRLANSTVNSDGSVTVTIV 291 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCC------------CCCCCCCceEeeeeeecCCCceEEEEE
Confidence 45788899999999999999998832 222222221111 23677888888777 777 99999
Q ss_pred eCCCCCCCCCCcceeEEEEEEEEe-c-----CCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCC--C
Q psy15127 430 WGEPEPRGGGVAPVIGYTVEYFSS-D-----LQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPV--S 501 (633)
Q Consensus 430 W~~~~~~~~~~~~i~~Y~v~~~~~-~-----~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~--~ 501 (633)
|.+|... ++++.+|.|+|+.. + ....|.........+.++|.+|.|++.|.|+|+|.|..|.|+++.. .
T Consensus 292 W~pP~~~---~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~ 368 (680)
T 1zlg_A 292 WDLPEEP---DIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVS 368 (680)
T ss_pred ecCCCCC---CCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCcee
Confidence 9988743 57999999999832 1 1224655444445578999999999999999999999999988766 1
Q ss_pred CceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEE-----------EEEEecCCCcccccchhhhhcceeE
Q psy15127 502 PITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRI-----------TWEVSWGSVPQHLLDEARARLGTKV 570 (633)
Q Consensus 502 ~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v-----------~W~~p~~~~p~~~~~~~~~i~~y~~ 570 (633)
..+.|...+|. |.++ .+..++.+++.| .|.+| . ..+.+.+| .
T Consensus 369 v~~~T~~~~P~-p~~l----------------~~~~~s~tsi~lp~~~~~~~~~l~W~~P--------~-~~~~~~~y-~ 421 (680)
T 1zlg_A 369 LHFTSTHATNN-KEQL----------------VKTRKGGIQTQLPFQRRRPTRPLEVGAP--------F-YQDGQLQV-K 421 (680)
T ss_pred EEEECCCCCCC-cccc----------------ccccccCccccccccccCCCccccccCC--------c-ccCCcceE-E
Confidence 25677777666 4444 566667777766 99954 1 22346688 8
Q ss_pred EEEEEcCCCcccceeeeeeccc--------eeEeecCCccceEEeeccccceeEEEEEeccccccccc
Q psy15127 571 VNLRELIPTASTAVRITWEKYN--------MATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGA 630 (633)
Q Consensus 571 i~~~~~~~~~~~~~~~~w~~~~--------~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~ 630 (633)
|.|.......-..=...|.... ..........++++|.+|+|++.|.|+|+|.|..|.|+
T Consensus 422 v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~ 489 (680)
T 1zlg_A 422 VYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK 489 (680)
T ss_pred EEEeCCCCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCC
Confidence 8887665432000011221110 01111234578899999999999999999999999553
No 162
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.81 E-value=3.5e-19 Score=165.32 Aligned_cols=185 Identities=17% Similarity=0.197 Sum_probs=121.9
Q ss_pred CCCceEEEcC--CeEEEEEEEeccCCCeEEEEeC---CccCCCCC-eEEcccceEEEccCCCCCCeEEEEEEEeCCceE-
Q psy15127 77 EPSDATVLSG--SVVEFVCRVGGDPLPTILWRRD---DGKMPTGR-AKILDDRSLQIENVGPQDEGLYICDVENLVGSI- 149 (633)
Q Consensus 77 ~~~~~~~~~G--~~~~L~C~~~~~p~p~i~W~~~---~~~i~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~- 149 (633)
.|..+.+.+| +.++|.|.+.+ |.+.++|+++ +..+..+. ........|.|.+++.+|+|.|+|.|.|..+..
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 4578889999 99999999976 7789999884 66665543 333456789999999999999999998854432
Q ss_pred EEEEEEEEEee-ccccccCC-CceEEecCCcEEEEEeCCCCCC--CCeEEEEECCEEeccCCCeeEEeccceeeeEEEee
Q psy15127 150 SLRASLTVHLL-RDDFRAEP-KDTRVASGETALLECGPPKGQP--EPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRP 225 (633)
Q Consensus 150 s~~~~l~V~~~-~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p--~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 225 (633)
+..+.|.|... +|.+...+ ....+.+|++++|.|. ..|.| .+.+.|++++..+... ....
T Consensus 92 s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~-~~g~p~~~~~i~W~~~g~~~~~~---~~~~------------ 155 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCT-ARTELNVGIDFNWEYPSSKHQHK---KLVN------------ 155 (213)
T ss_dssp CCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEE-EEECTTBCCEEEEECSCSSCCSE---EEEE------------
T ss_pred EEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEE-EECCCCCceEEEEEecCCccceE---EEec------------
Confidence 33366666431 13344333 3347888888888888 45433 3478888776533210 0000
Q ss_pred eEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCC
Q psy15127 226 LYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGV 305 (633)
Q Consensus 226 ~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~ 305 (633)
. ..+. ...... ....+.|.|.++
T Consensus 156 -----------------------------------------------~-~~~~--------~~~~~~-~~~~~~L~I~~v 178 (213)
T 2x1w_L 156 -----------------------------------------------R-DLKT--------QSGSEM-KKFLSTLTIDGV 178 (213)
T ss_dssp -----------------------------------------------E-EECC--------CSSCSC-EEEEEEEEESSC
T ss_pred -----------------------------------------------c-cccc--------ccCccc-eeeeEEEEECCC
Confidence 0 0000 000000 011247999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEEEec
Q psy15127 306 QKEDAGFFVCSALSVAGSTTVRAFLQVREF 335 (633)
Q Consensus 306 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 335 (633)
+.+|+|.|+|.|.|..|..+..+.|.|.+.
T Consensus 179 ~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 179 TRSDQGLYTCAASSGLMTKKNSTFVRVHED 208 (213)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEC-
T ss_pred CcccCEEEEEEEecCCCcEEEEEEEEEecc
Confidence 999999999999999999999999999863
No 163
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.81 E-value=8.4e-20 Score=165.14 Aligned_cols=124 Identities=21% Similarity=0.191 Sum_probs=93.0
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
..+|.+...|.. .+.+|++++|.|.+.+ +.+.+.|+|++.. ....++.|.|.+++.+|+|.|+|.+.|..|.
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 77 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLW 77 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC------CEESSSEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc------ccCcccEEEECcCChhhCceEEEEEEcCCCc
Confidence 457888888775 7999999999999987 7789999999876 2234678999999999999999999998764
Q ss_pred --EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEe
Q psy15127 149 --ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFI 203 (633)
Q Consensus 149 --~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~ 203 (633)
.+..+.|.|... +|.+...+ ...+.+|+.+.|.|. ..+.| +.+.|+|+|..+
T Consensus 78 ~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~-~~~~~-~~~~w~k~g~~~ 133 (184)
T 2gi7_A 78 SLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQ-TRYGF-DQFALYKEGDPA 133 (184)
T ss_dssp BCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEE-CSSCC-CEEEEEECCCCT
T ss_pred cCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEE-cCCCC-cEEEEEECCCcC
Confidence 355677777543 24444444 345667888888888 34433 577787776543
No 164
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=4e-19 Score=160.79 Aligned_cols=157 Identities=21% Similarity=0.330 Sum_probs=115.3
Q ss_pred ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccC--C-------------CCCeEEc----c--cceEEEccCCCCCCeEE
Q psy15127 80 DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKM--P-------------TGRAKIL----D--DRSLQIENVGPQDEGLY 138 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i--~-------------~~~~~~~----~--~~~L~i~~v~~~d~G~Y 138 (633)
.+.+.+|++++|.|.+.+.|.+.+.|+|++..+ . .++.... . ...|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 467899999999999998888999999998631 1 1122222 1 34599999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEecccee
Q psy15127 139 ICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTL 218 (633)
Q Consensus 139 ~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 218 (633)
+|.+.+..+ .+.|.|... + .+....+.+|+.+.|.|. ..+.|.+.+.|++++.
T Consensus 84 ~C~~~~~~~----~~~l~V~~~-~----~~~~~~v~~g~~~~l~C~-~~~~p~~~v~W~~~~~----------------- 136 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGL-T----ANSDTHLLQGQSLTLTLE-SPPGSSPSVQCRSPRG----------------- 136 (184)
T ss_dssp EEEETTEEE----EEEEEEEEE-E----ESSCSEEETTCCEEEEEE-CCTTCCCEEEEECTTS-----------------
T ss_pred EEEEEcCCC----cEEEEEEEe-c----CCCCceeecCCCEEEEEE-cCCCCCCEEEEEeCCC-----------------
Confidence 999987644 455666543 1 123346677888888887 4445666666665532
Q ss_pred eeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCc
Q psy15127 219 GWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG 298 (633)
Q Consensus 219 ~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 298 (633)
.+ ....+
T Consensus 137 -------------------------------------------------------------~~------------~~~~~ 143 (184)
T 2ny1_B 137 -------------------------------------------------------------KN------------IQGGK 143 (184)
T ss_dssp -------------------------------------------------------------CE------------EEESS
T ss_pred -------------------------------------------------------------cc------------ccCce
Confidence 11 11345
Q ss_pred eEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc
Q psy15127 299 TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC 336 (633)
Q Consensus 299 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 336 (633)
.|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 144 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 144 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 89999999999999999999999999999999998643
No 165
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.81 E-value=2.7e-18 Score=174.43 Aligned_cols=212 Identities=15% Similarity=0.174 Sum_probs=161.6
Q ss_pred CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCC
Q psy15127 357 LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPR 436 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~ 436 (633)
..+.+.+|.....|.|++.|.|..|...... +... +. .| +|..+.+...+.+++.|+|.++.
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~~--~~------------~p-~p~~l~~~~~~~~si~l~W~~~~-- 120 (375)
T 3t1w_A 59 SSCTFDNLSPGLEYNVSVYTVKDDKESVPIS-DTII--PE------------VP-QLTDLSFVDITDSSIGLRWTPLN-- 120 (375)
T ss_dssp CEEEECCCCTTCCEEEEEEEEETTEECCCEE-EEEC--CC------------CC-CCSCCEEECCCSSEEEEECCCCC--
T ss_pred cEEEEcCCcCCCEEEEEEEEEcCCCCCCcEE-eeEc--CC------------CC-CCceEEEEecCCCeEEEEEECCC--
Confidence 4457788999999999999999887543322 2111 11 12 37778888889999999999986
Q ss_pred CCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcc
Q psy15127 437 GGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQH 516 (633)
Q Consensus 437 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~ 516 (633)
++.+.+|.|+|+..+....+...........++|.+|.|++.|.|+|+|.|..|.|.++... ..| .|.+|..
T Consensus 121 ---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~--~~t---~~~~p~~ 192 (375)
T 3t1w_A 121 ---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLT--QQT---AVPPPTD 192 (375)
T ss_dssp ---CTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEE--EEC---CCCCCEE
T ss_pred ---CCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeee--eec---CCCCCce
Confidence 46899999999987655445444444567889999999999999999999999999876532 333 3334444
Q ss_pred hHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEe
Q psy15127 517 LLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATV 596 (633)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~ 596 (633)
+ .+..++.+++.|+|++| .++.+.+| .|+|+..+... .|. .+
T Consensus 193 l----------------~~~~~~~~si~l~W~~p----------~~~~i~~Y-~v~~~~~~~~~------~~~-----~~ 234 (375)
T 3t1w_A 193 L----------------RFTNIGPDTMRVTWAPP----------PSIDLTNF-LVRYSPVKNEE------DVA-----EL 234 (375)
T ss_dssp E----------------EEESCCSSCEEEEEECC----------SSCCCCEE-EEEEEEGGGTT------CCE-----EE
T ss_pred e----------------EEEecccCEEEEEEcCC----------CCCCccEE-EEEEEeCCCCC------CcE-----EE
Confidence 4 67788899999999943 24779999 99999876433 132 33
Q ss_pred ecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 597 MNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 597 ~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
...+..++++|.+|++++.|.|+|+|.|..|.|+++
T Consensus 235 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 270 (375)
T 3t1w_A 235 SISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 270 (375)
T ss_dssp EECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce
Confidence 345667999999999999999999999999999874
No 166
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.80 E-value=5e-20 Score=176.29 Aligned_cols=147 Identities=16% Similarity=0.184 Sum_probs=93.9
Q ss_pred CCeEEEEEEe---------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccC-----CCeEEEEeCC--ccC---------
Q psy15127 58 DDQWKLIAKE---------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDP-----LPTILWRRDD--GKM--------- 112 (633)
Q Consensus 58 ~G~Y~C~a~~---------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-----~p~i~W~~~~--~~i--------- 112 (633)
+|.|+|.|.. +..++.+...|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+
T Consensus 16 sg~Y~C~a~g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~ 95 (254)
T 2c1o_A 16 SVKLSCKASGYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSK 95 (254)
T ss_dssp ----------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTE
T ss_pred cEEEEEcCchhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccc
Confidence 9999999987 23356777778899999999999999998887 4889999843 222
Q ss_pred -C---CCCeEEcc---cceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee--ccccccCCCceEEecCCcEEEE
Q psy15127 113 -P---TGRAKILD---DRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLE 182 (633)
Q Consensus 113 -~---~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~ 182 (633)
. .+++.... ...|.|.+++.+|+|.|+|.|.|..+. ....+.|.|... +|.+...+.......|+.+.|.
T Consensus 96 ~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~ 175 (254)
T 2c1o_A 96 LDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVV 175 (254)
T ss_dssp ECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEE
T ss_pred cCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEE
Confidence 0 13443332 238999999999999999999987554 223345666542 2555443333333468899999
Q ss_pred EeCCCCCCC-CeEEEEECCEEec
Q psy15127 183 CGPPKGQPE-PTLHWKKNGQFID 204 (633)
Q Consensus 183 C~~~~~~p~-~~i~W~~~~~~~~ 204 (633)
|.+....|. +.+.|+++|..+.
T Consensus 176 C~~~g~~p~~~~v~W~k~g~~l~ 198 (254)
T 2c1o_A 176 CFLNNFYPKDINVKWKIDGSERQ 198 (254)
T ss_dssp EEEEEEBSSCCEEEEEESSSEEC
T ss_pred EEEecccCCCcEEEEEECCCccc
Confidence 995333454 5799999987664
No 167
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.80 E-value=9.1e-19 Score=164.21 Aligned_cols=121 Identities=21% Similarity=0.295 Sum_probs=87.5
Q ss_pred CCceEEEcCCeEEEEEEEeccCCC---eEEEEeCCccCC------------------CCCeEEcc------cceEEEccC
Q psy15127 78 PSDATVLSGSVVEFVCRVGGDPLP---TILWRRDDGKMP------------------TGRAKILD------DRSLQIENV 130 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~p~p---~i~W~~~~~~i~------------------~~~~~~~~------~~~L~i~~v 130 (633)
+..+.+.+|++++|.|.+.+.+.+ .|+|+|++.... ..+..... +..|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 345789999999999999866544 699999764320 11222221 347999999
Q ss_pred CCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 131 GPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
+.+|+|.|+|.|.|..|..+..+.+.+. +.....+....+.+|+.+.|.|.+..+.|.++|.|++++.
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~---~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~ 158 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVA---ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKG 158 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE---BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTS
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeec---cceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCc
Confidence 9999999999999988876655544443 3334444556788999999999954446888999988654
No 168
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.80 E-value=3e-19 Score=176.61 Aligned_cols=186 Identities=17% Similarity=0.176 Sum_probs=137.6
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCc
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------ALIKPFPISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDG 110 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~ 110 (633)
+++|.|.+++. +|.|+|.+.+ +..+|.+...+....+..|+.+.|.|.+. +.|.+.++|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 46799999998 9999999865 45677777777777788899999999875 78999999999988
Q ss_pred cCCCCCeEEc-c------cceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEEEEEeeccccccCC-CceEEecCCcEE
Q psy15127 111 KMPTGRAKIL-D------DRSLQIENVGPQDEGLYICDVENLVGS--ISLRASLTVHLLRDDFRAEP-KDTRVASGETAL 180 (633)
Q Consensus 111 ~i~~~~~~~~-~------~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l~V~~~~p~~~~~~-~~~~~~~g~~~~ 180 (633)
.+........ . .+.|.|.++..+|+|.|+|.|.|..+. .+..+.|.|..+ |.+.+.+ ....+.+|+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~-P~v~~~~~~~~~~~~g~~v~ 236 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYP-PEVSISGYDNNWYLGQNEAT 236 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEE-EEEEEECCCSCEETTCCCEE
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccC-CccccccccceeecCCCeEE
Confidence 7643221111 1 236899999999999999999997655 456667777777 6665443 444667789999
Q ss_pred EEEeCCCCCCCC-eEEEEECCEEeccCC---CeeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 181 LECGPPKGQPEP-TLHWKKNGQFIDLES---SKSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 181 l~C~~~~~~p~~-~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
|.|. +.|+|.+ .|.|+++|..+.... ...+.+.+.... ..|.|+|.|.|..|.
T Consensus 237 l~C~-~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~---d~G~Y~C~a~N~~G~ 293 (313)
T 4fqp_A 237 LTCD-ARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKP---INTTLICNVTNALGA 293 (313)
T ss_dssp EEEE-EEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSC---CEEEEEEEEECSSCE
T ss_pred EEEE-ecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChh---hCEEEEEEEEeCCCc
Confidence 9999 5888888 799999998765321 112222222222 258999999998773
No 169
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=2.2e-19 Score=162.98 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=91.6
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEEcccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKILDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+.. .......+..|.|.+++.+|+|.|+|.+.|.
T Consensus 2 l~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 2 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 357888888877 7999999999999875 3568999999986531 1111123468999999999999999999887
Q ss_pred Cce--EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 146 VGS--ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 146 ~g~--~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
.+. .+..+.|.|... +|.+...+ ...+.+|+.++|.|.+ .+ +.+.+.|+|+|.
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~ 136 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGR 136 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEEC-SS-SCSEEEEEEESS
T ss_pred CCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEc-CC-CCCEEEEEECCc
Confidence 553 356677777642 24444444 3457788888888883 33 345777777654
No 170
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.9e-19 Score=176.19 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=138.8
Q ss_pred ceEEEcCCCC--CCeEEEEEEe------------cCcCCe-eeeCCCceEEEcCCeEEEEEEEeccCC--CeEEEEeC-C
Q psy15127 48 SVLGARGALS--DDQWKLIAKE------------ALIKPF-PISEPSDATVLSGSVVEFVCRVGGDPL--PTILWRRD-D 109 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~-~~~~~~~~~~~~G~~~~L~C~~~~~p~--p~i~W~~~-~ 109 (633)
+.|.|.+++. +|.|+|.+.| +..+|. +...+....+.+|+.+.|.|.+.+ |. +.++|+++ +
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~ 129 (292)
T 4dkd_C 51 SILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRG 129 (292)
T ss_dssp EEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGG
T ss_pred EEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCC
Confidence 4899999998 9999999988 344444 456677888999999999999987 44 68999997 5
Q ss_pred ccCCCC-CeEEcccceEEEccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEe---eccccccCCCceEEecCCcEEEEEe
Q psy15127 110 GKMPTG-RAKILDDRSLQIENVGPQDEGLYICDVENLVGSI-SLRASLTVHL---LRDDFRAEPKDTRVASGETALLECG 184 (633)
Q Consensus 110 ~~i~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~ 184 (633)
..+... +.....++.|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|.. .+|.+...+....+.+|+.+.|.|.
T Consensus 130 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~ 209 (292)
T 4dkd_C 130 RPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCS 209 (292)
T ss_dssp CCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEE
T ss_pred CccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEE
Confidence 555444 3344445679999999999999999999887754 4578888886 1377777777777789999999999
Q ss_pred CCCCCCCCeEEEEECCEEeccCCCeeEEec----cceeeeEEE----eeeEEEEeecCCCC
Q psy15127 185 PPKGQPEPTLHWKKNGQFIDLESSKSLDLS----RRTLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 185 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
+....+...+.|++++..+........... ...+.+..+ .|.|+|.|.|..+.
T Consensus 210 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 270 (292)
T 4dkd_C 210 ASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK 270 (292)
T ss_dssp EEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred ecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC
Confidence 543344468999999876654333221111 112222222 48999999998774
No 171
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.79 E-value=2.8e-19 Score=166.06 Aligned_cols=133 Identities=16% Similarity=0.129 Sum_probs=98.0
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC--CccC-------------CCCCeEE---cccceEEEccCCCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD--DGKM-------------PTGRAKI---LDDRSLQIENVGPQ 133 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--~~~i-------------~~~~~~~---~~~~~L~i~~v~~~ 133 (633)
|.+...| .+.+.+|++++|.|.+.+.+.+.+.|+|+ +... ..+++.. ..+..|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 4455556 88999999999999999889999999993 2211 1123332 23457999999999
Q ss_pred CCeEEEEEEEeCCc---eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEecc
Q psy15127 134 DEGLYICDVENLVG---SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDL 205 (633)
Q Consensus 134 d~G~Y~C~~~n~~g---~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~ 205 (633)
|+|.|+|.|.+..+ .....+.|.|... +|.+...+....+.+|+.+.|.|.+....|+ +.+.|+++|..+..
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 99999999999887 4566678888831 2556555555555589999999995433344 49999999887753
No 172
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.79 E-value=7.4e-19 Score=174.05 Aligned_cols=181 Identities=16% Similarity=0.189 Sum_probs=128.0
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe-----------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE-----------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTI 103 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~-----------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i 103 (633)
.++.|.|.+++. +|.|+|.|.+ + ..+|.+...+... +.+|+.++|.|.+. .+.+.+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~ 149 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHF 149 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEE
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEE
Confidence 457899999998 9999999874 1 2346666665554 88999999999995 456789
Q ss_pred EEEeCCccCCCCCeE---E--cccceEEEccCCCCCCeEEEEEEEeCCce-----EEEEEEEEEEee--ccccccCCCce
Q psy15127 104 LWRRDDGKMPTGRAK---I--LDDRSLQIENVGPQDEGLYICDVENLVGS-----ISLRASLTVHLL--RDDFRAEPKDT 171 (633)
Q Consensus 104 ~W~~~~~~i~~~~~~---~--~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-----~s~~~~l~V~~~--~p~~~~~~~~~ 171 (633)
.|+|++..+...... . .....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|... +|.+...+. .
T Consensus 150 ~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~ 228 (316)
T 3vh8_G 150 FLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-P 228 (316)
T ss_dssp EEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-S
T ss_pred EEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-C
Confidence 999999877532111 1 13468999999999999999999998763 256667777643 244444443 3
Q ss_pred EEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCC----------eeEEeccceeeeEEEeeeEEEEeecCCC
Q psy15127 172 RVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS----------KSLDLSRRTLGWLRVRPLYWNVARPRAN 236 (633)
Q Consensus 172 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~y~C~a~~~~~ 236 (633)
.+.+|+.++|.|.+ . .|.+.+.|+++|..+..... ..+.+.... ..|.|+|.|.|..+
T Consensus 229 ~v~~G~~v~L~C~~-~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~-----D~G~Y~C~a~n~~~ 296 (316)
T 3vh8_G 229 KVQAGESVTLSCSS-R-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT-----HGGTYRCFGSFRHS 296 (316)
T ss_dssp CCCTTSCCEEEEEE-S-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC----------CEEEEEEEBTTB
T ss_pred eecCCCcEEEEEEC-C-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC-----CCEEEEEEeecCCC
Confidence 57899999999995 3 47789999999876542111 112222211 67999999999754
No 173
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=158.62 Aligned_cols=85 Identities=16% Similarity=0.222 Sum_probs=67.2
Q ss_pred eCCCceEEEcCCeEEEEEEEec-cCCCeEEEEeCCccCC---C----------------CCeEEcccceEEEccCCCCCC
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGG-DPLPTILWRRDDGKMP---T----------------GRAKILDDRSLQIENVGPQDE 135 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~-~p~p~i~W~~~~~~i~---~----------------~~~~~~~~~~L~i~~v~~~d~ 135 (633)
..|..+.+.+|++++|.|.+.+ .+.+.|.|+|++..+. . ++..+..+++|+|.+++.+|+
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred CCCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 3567788999999999999875 4557899999876431 0 133344567899999999999
Q ss_pred eEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 136 GLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 136 G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
|.|+|.+.+..+.....+.|.|..+
T Consensus 83 G~Y~C~~~~~~~~~~~~~~L~V~~~ 107 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSSYTLRILRQ 107 (193)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEEEEcc
Confidence 9999999998887777888888765
No 174
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=2e-19 Score=169.34 Aligned_cols=132 Identities=21% Similarity=0.356 Sum_probs=104.2
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccCC-CeEEEEeCCccCC--------------CCCeE----------EcccceEEEcc
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDPL-PTILWRRDDGKMP--------------TGRAK----------ILDDRSLQIEN 129 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p~-p~i~W~~~~~~i~--------------~~~~~----------~~~~~~L~i~~ 129 (633)
+..|..+.+.+|+.+.|.|.+.+.+. +.+.|+|++.... .++.. ...++.|.|.+
T Consensus 4 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~ 83 (231)
T 2pet_A 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAE 83 (231)
T ss_dssp CCCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESS
T ss_pred ccCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcc
Confidence 45677889999999999999998885 8999998765422 12222 44456799999
Q ss_pred CCCCCCeEEEEEEEeCC-ceEEEEEEEEEEeec--cccccCCCceEEecCCcE-EEEEeCCCCCCCCeEEEEECCEEecc
Q psy15127 130 VGPQDEGLYICDVENLV-GSISLRASLTVHLLR--DDFRAEPKDTRVASGETA-LLECGPPKGQPEPTLHWKKNGQFIDL 205 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~-g~~s~~~~l~V~~~~--p~~~~~~~~~~~~~g~~~-~l~C~~~~~~p~~~i~W~~~~~~~~~ 205 (633)
++.+|+|.|+|.+.+.. +..+..+.|.|..++ |.+...+....+.+|+.+ .|.|.+..+.|.+.+.|++++..+..
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 99999999999999987 778888999998763 233444555567789988 99999548899999999999998765
Q ss_pred C
Q psy15127 206 E 206 (633)
Q Consensus 206 ~ 206 (633)
.
T Consensus 164 ~ 164 (231)
T 2pet_A 164 P 164 (231)
T ss_dssp C
T ss_pred c
Confidence 4
No 175
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.79 E-value=2.7e-19 Score=161.97 Aligned_cols=170 Identities=15% Similarity=0.265 Sum_probs=107.0
Q ss_pred ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEcc-CCCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 80 DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIEN-VGPQDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
-..+.+|+.+.|.|.+.+ +. .|+|+|+|..+... .+++|.|.+ ++.+|+|.|+|.|.|..|..+..+.+.|.
T Consensus 8 ~~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~ 80 (186)
T 1jbj_A 8 YKVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVG 80 (186)
T ss_dssp CEEEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCC
T ss_pred EEEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 345678999999999987 43 49999999988653 345899999 99999999999999998876555555554
Q ss_pred eeccccccCCCc-eEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 159 LLRDDFRAEPKD-TRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 159 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
...+.. ..+.. ..........+.+..... ...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~--------------------------- 113 (186)
T 1jbj_A 81 SADDAK-KDAAKKDDAKKDDAKKDGSQTNKA-------------------KNL--------------------------- 113 (186)
T ss_dssp SCCCCC-CCCCCCCCCSCCSSSTTCCSCCCC-------------------SSC---------------------------
T ss_pred cccccc-cccccccccccCCccccccccccc-------------------ccc---------------------------
Confidence 331110 00000 000000000000000000 000
Q ss_pred CCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEE
Q psy15127 238 NPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 317 (633)
Q Consensus 238 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 317 (633)
.....+..|+.+.|.|.+ |.|.+.|+|+|..+.... ...+.|.|.++..+|+|.|+|.|
T Consensus 114 ---------~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~---------~~~~~L~i~~v~~~D~G~Y~C~a 172 (186)
T 1jbj_A 114 ---------VQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN---------ATKNTWNLGNNAKDPRGTYQCQG 172 (186)
T ss_dssp ---------CEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS---------CCSSCCEEEETTSCCEEEEEEEE
T ss_pred ---------ccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC---------CCcceEEECCCCcCcCEEEEEEE
Confidence 000112356777777776 667778888777653110 14558999999999999999999
Q ss_pred EeCCcee
Q psy15127 318 LSVAGST 324 (633)
Q Consensus 318 ~n~~g~~ 324 (633)
.|..|..
T Consensus 173 ~N~~g~~ 179 (186)
T 1jbj_A 173 AKETSNP 179 (186)
T ss_dssp SSCEEEE
T ss_pred EcCcCCc
Confidence 9998876
No 176
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.79 E-value=6e-18 Score=171.42 Aligned_cols=211 Identities=14% Similarity=0.129 Sum_probs=158.3
Q ss_pred CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCC
Q psy15127 357 LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPR 436 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~ 436 (633)
..+.+.+|.....|.|++.|.|..|..... ...+. +. +.+|..+.....+..++.|+|+++.
T Consensus 58 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~--~~-------------~~~p~~l~~~~~~~~si~l~W~~p~-- 119 (368)
T 1fnf_A 58 SSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTII--PA-------------VPPPTDLRFTNIGPDTMRVTWAPPP-- 119 (368)
T ss_dssp CEEECCCCCTTSCEEEEEEEEETTEECCCE-EEEEC--CC-------------CCCCEEEEEESCCSSCEEEEEECCT--
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCccCce-eeeec--CC-------------CcCCceeEEEEcCCCeEEEEeeCCC--
Confidence 345677899999999999999998865322 22221 11 1256667777778999999999996
Q ss_pred CCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcc
Q psy15127 437 GGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQH 516 (633)
Q Consensus 437 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~ 516 (633)
++.+.+|.|+|+..+....|...........++|.+|.|++.|.|+|+|.|..|.+.+.. . ....+|.+|.+
T Consensus 120 ---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~----~-~~~~~~~~P~~ 191 (368)
T 1fnf_A 120 ---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR----G-RQKTGLDSPTG 191 (368)
T ss_dssp ---TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE----E-EEECCCCCCEE
T ss_pred ---CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeE----e-eecCCCCCCCc
Confidence 357899999999876555666554555678899999999999999999999999876532 1 12233444444
Q ss_pred hHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEe
Q psy15127 517 LLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATV 596 (633)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~ 596 (633)
+ .+..++.+++.|+|++| .+.+.+| .|+|+...... .|. ..
T Consensus 192 l----------------~~~~~~~~sv~l~W~~p-----------~~~i~~Y-~v~~~~~~~~~------~~~-----~~ 232 (368)
T 1fnf_A 192 I----------------DFSDITANSFTVHWIAP-----------RATITGY-RIRHHPEHFSG------RPR-----ED 232 (368)
T ss_dssp E----------------EEESCCSSEEEEEEECC-----------SSCCSEE-EEEEECSCCSS------CCE-----EE
T ss_pred c----------------EEEEccCCEEEEEEeCC-----------CCCcCEE-EEEEecCCCCC------Ccc-----EE
Confidence 4 67788899999999943 2689999 99998775432 121 22
Q ss_pred ecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 597 MNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 597 ~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
......++++|.+|++++.|.|+|+|.|..|.|+++
T Consensus 233 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~ 268 (368)
T 1fnf_A 233 RVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL 268 (368)
T ss_dssp EEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCE
T ss_pred EeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcc
Confidence 234568899999999999999999999999999875
No 177
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.79 E-value=2.8e-18 Score=167.61 Aligned_cols=175 Identities=19% Similarity=0.213 Sum_probs=139.1
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|.+|..+.+...+.+++.|+|.++. +.+.+|.|+|+..+....|...........++|.+|.|++.|.|+|+|
T Consensus 20 ~p~~P~~l~~~~~~~~sv~l~W~~p~------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 93 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTPTSLSAQWTPPN------VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYA 93 (290)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCS------SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CCCCCCceEEEECCCCEEEEEEeCCC------CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 35677788888899999999999984 478899999998765566766555556789999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.|.++.. .+.|...+ .+|.++ .+..++.+++.|+|++| ++.+.+|
T Consensus 94 ~~~~g~s~~s~~--~~~t~~~~-~~P~~l----------------~~~~~~~~sv~l~W~~p-----------~~~~~~Y 143 (290)
T 3r8q_A 94 LKDTLTSRPAQG--VVTTLENV-SPPRRA----------------RVTDATETTITISWRTK-----------TETITGF 143 (290)
T ss_dssp EETTEECCCEEE--EEECCCCC-CCCEEE----------------EEEEECSSCEEEEEECC-----------SCCCCEE
T ss_pred EeCCCCCCCcce--eEecCCCC-CCCcee----------------EEEEcCCCeEEEEEeCC-----------CCcccEE
Confidence 999999987643 35554433 444444 77888999999999942 4689999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.|+|+..+... + .........++++|.+|+|++.|.|+|+|.|..|.|+++
T Consensus 144 -~v~~~~~~~~~-------~-----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 194 (290)
T 3r8q_A 144 -QVDAVPANGQT-------P-----IQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV 194 (290)
T ss_dssp -EEEEEESSSCC-------C-----EEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred -EEEEEECCCCc-------c-----eEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE
Confidence 99998876543 1 122344578899999999999999999999999998764
No 178
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.78 E-value=1e-18 Score=168.33 Aligned_cols=174 Identities=15% Similarity=0.162 Sum_probs=126.3
Q ss_pred eeCceEEEcCC---CC--CC--eEEEEEEe------------cCc--CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeE
Q psy15127 45 IFGSVLGARGA---LS--DD--QWKLIAKE------------ALI--KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTI 103 (633)
Q Consensus 45 ~~~~~L~i~~v---~~--~G--~Y~C~a~~------------v~~--~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i 103 (633)
..++.|.|..+ +. +| .|+|.|.| +.. +|.+. +....+.+|+.++|.|.+. |.+.+
T Consensus 53 ~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i 128 (265)
T 2oz4_A 53 YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKV 128 (265)
T ss_dssp ECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEE
T ss_pred eCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEE
Confidence 34456777766 33 66 59999998 322 34444 3456688999999999987 88999
Q ss_pred EEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC-ceEE---EEEEEEEEeeccccccC--CCceEEecCC
Q psy15127 104 LWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV-GSIS---LRASLTVHLLRDDFRAE--PKDTRVASGE 177 (633)
Q Consensus 104 ~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~-g~~s---~~~~l~V~~~~p~~~~~--~~~~~~~~g~ 177 (633)
+| +|..+.... ..+.|.|..+..+|+|.|+|.|.|.. |... ..+.|.|..+ |.+... |....+.+|+
T Consensus 129 ~W--~g~~~~~~~----~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~-p~~~~~~~p~~~~v~~g~ 201 (265)
T 2oz4_A 129 TL--NGVPAQPLG----PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG-PRLDERDCPGNWTWPENS 201 (265)
T ss_dssp EE--SSCSSSCCS----SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEE-EECCGGGSCSEEEEETTC
T ss_pred EE--CCEEccCCC----CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeC-CccccccCCCccEEcCCC
Confidence 99 777774322 22578899999999999999998544 6544 7788999887 554433 5567889999
Q ss_pred cEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCC
Q psy15127 178 TALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANL 237 (633)
Q Consensus 178 ~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~ 237 (633)
.+.|.|. +.|.|.+.+.|++++..+...... +.+ .....|.|+|.|.|..+.
T Consensus 202 ~~~l~C~-~~g~P~p~i~W~~~~~~~~~~g~~-~~v------~~~d~G~Y~C~a~N~~G~ 253 (265)
T 2oz4_A 202 QQTPMCQ-AWGNPLPELKCLKDGTFPLPIGES-VTV------TRDLEGTYLCRARSTQGE 253 (265)
T ss_dssp EECCCCC-CEEESCCEEEEEETTTEECCTTSC-EEC------CGGGCEEEEEEEEETTEE
T ss_pred eEEEEeE-CccCCCCeEEEEECCcccCCCCcE-EEe------ehhhCeEEEEEEECCCCc
Confidence 9999999 699999999999998833222111 111 112358999999998763
No 179
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.77 E-value=5.5e-18 Score=158.37 Aligned_cols=124 Identities=23% Similarity=0.332 Sum_probs=91.2
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCC-----CeEEEEeCCccC---------C-------CCCeEEccc------ceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPL-----PTILWRRDDGKM---------P-------TGRAKILDD------RSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~-----p~i~W~~~~~~i---------~-------~~~~~~~~~------~~L~i~ 128 (633)
..+..+.+.+|+++.|.|.+.+.|. +.+.|+|++..+ . .++.....+ ..|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 4456678999999999999877663 389999975322 1 133333322 489999
Q ss_pred cCCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEEC-CEE
Q psy15127 129 NVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKN-GQF 202 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~ 202 (633)
+++.+|+|.|+|.+.+ .+.....+.|.|..+ +..........+.+|+.+.|.|. +.|.|.+.+.|+++ +..
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~-~~~~~~~~~~~~~~g~~v~L~C~-~~g~P~p~i~W~~~~g~~ 157 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAP-YNKINQRILVVDPVTSEHELTCQ-AEGYPKAEVIWTSSDHQV 157 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBC-CCCCEEEEEEEETTTTEEEEEEE-EEEBSCCEEEEEETTCCE
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECC-CCCCCceeeeeecCCCcEEEEEE-ecCCCCCeEEEEECCCce
Confidence 9999999999999998 566777888888876 33222222225678999999999 47789999999998 443
No 180
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.77 E-value=1.8e-18 Score=160.92 Aligned_cols=178 Identities=17% Similarity=0.210 Sum_probs=113.2
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCCC---eEEEEeCCccCCCC-------------------CeEEc------ccceEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPLP---TILWRRDDGKMPTG-------------------RAKIL------DDRSLQI 127 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~p---~i~W~~~~~~i~~~-------------------~~~~~------~~~~L~i 127 (633)
..|..+.+.+|++++|.|.+.+.|.+ .|+|+|++..+... +.... .+.+|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 45678899999999999999887765 48999987654311 11111 1357999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccC
Q psy15127 128 ENVGPQDEGLYICDVENLVGS-ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLE 206 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 206 (633)
.+++.+|+|.|.|.+.+..+. ......+.+..+++.....+....+..|+.+.|.|. ..+.|.+.|.|++++.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~-~~g~p~p~i~W~~~~~----- 157 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCT-AEGSPAPSVTWDTEVK----- 157 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEE-EEEBSCCEEEEEESSC-----
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeee-ccCCcCceEEEEECCc-----
Confidence 999999999999999887665 344444555444222233333334445555555555 3445555555555443
Q ss_pred CCeeEEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccC
Q psy15127 207 SSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPG 286 (633)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~ 286 (633)
.+.....
T Consensus 158 -------------------------------------------------------------------------~~~~~~~ 164 (218)
T 4frw_A 158 -------------------------------------------------------------------------GTTSSRS 164 (218)
T ss_dssp -------------------------------------------------------------------------CEEEEEE
T ss_pred -------------------------------------------------------------------------ccccCce
Confidence 3221000
Q ss_pred CccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 287 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 287 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.... ......+.|.|..+..+|.|.|+|.|.|..|..+..+.+.|.
T Consensus 165 ~~~~-~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 165 FKHS-RSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EECS-SSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EecC-CcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 0000 001122479999999999999999999999988776666654
No 181
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.77 E-value=1.4e-17 Score=162.09 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=134.3
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|.+|..+.+...+.+++.|+|+++. +.+.+|.|+|+.......|...........++|.+|.|++.|.|+|+|
T Consensus 14 ~p~~P~~l~~~~~~~~sv~l~W~~~~------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 87 (283)
T 1tdq_A 14 VIDGPTQILVRDVSDTVAFVEWTPPR------AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISA 87 (283)
T ss_dssp SSCCCEEEEEEEECSSCEEEEEECCS------SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCcEEEEEecCCCeEEEEEECCC------CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEE
Confidence 35678888888889999999999987 368899999987654455654444456788999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcce
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGT 568 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y 568 (633)
.|..|.+.+... .+. .+|.+|.++ .+..++.+++.|+|++| .+.+.+|
T Consensus 88 ~~~~g~s~~~~~--~~~---t~p~~P~~l----------------~~~~~~~~sv~l~W~~p-----------~~~i~~Y 135 (283)
T 1tdq_A 88 VRGTNESDASST--QFT---TEIDAPKNL----------------RVGSRTATSLDLEWDNS-----------EAEAQEY 135 (283)
T ss_dssp EETTEECCCEEE--EEE---CCCCCCEEE----------------EEEEECSSCEEEEEECC-----------SSCCSEE
T ss_pred ECCCCCCCCeeE--EEE---CCCCCCCce----------------EEEecCCCeEEEEecCC-----------CCCccEE
Confidence 999998754221 122 345555555 78888999999999954 1689999
Q ss_pred eEEEEEEcCCCcccceeeeeeccceeEeecCCc---cceEEeeccccceeEEEEEeccccccccccC
Q psy15127 569 KVVNLRELIPTASTAVRITWEKYNMATVMNAAT---TTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 569 ~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~---~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.|+|+..+... |. .+..... .++++|.+|+|++.|.|+|+|.|..|+|+++
T Consensus 136 -~v~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 189 (283)
T 1tdq_A 136 -KVVYSTLAGEQ-------YH-----EVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA 189 (283)
T ss_dssp -EEEEEETTCCC-------CE-----EEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred -EEEEEeCCCCc-------ce-----EEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcce
Confidence 99998876543 22 2222334 7899999999999999999999999998764
No 182
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=156.86 Aligned_cols=137 Identities=14% Similarity=0.189 Sum_probs=108.2
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEeeCc-----eEEEcCCCC--CCeEEEEEEe--------cC---------
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGS-----VLGARGALS--DDQWKLIAKE--------AL--------- 69 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~--~G~Y~C~a~~--------v~--------- 69 (633)
+.|.+.|+ |..+|.++..+.++++..++ .|.|.+++. +|.|+|.|.| +.
T Consensus 29 ~~P~p~i~-------W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~~~~~~ 101 (207)
T 3rbs_A 29 LSGNAKVN-------YIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKL 101 (207)
T ss_dssp CCSCCEEE-------EEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTHHHHHH
T ss_pred CCCCCEEE-------EEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEccchhhh
Confidence 45778888 55666666666676665443 599999998 9999998776 10
Q ss_pred --------------cCCeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCCCCCeEEcc--cceEEEccCCC
Q psy15127 70 --------------IKPFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPTGRAKILD--DRSLQIENVGP 132 (633)
Q Consensus 70 --------------~~p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~~~~~~~~--~~~L~i~~v~~ 132 (633)
.+|.|...+ ...+.+|+.+.|.|.+.|. |.|.|+|+|+|..+..+...... ...|.|.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~ 180 (207)
T 3rbs_A 102 QKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSK 180 (207)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCG
T ss_pred cccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCc
Confidence 257776555 4788999999999999998 99999999999988654332222 24699999999
Q ss_pred CCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 133 QDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
+|+|.|+|.|.|..|..+..+.|.+.
T Consensus 181 ~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 181 KDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 99999999999999999888887653
No 183
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=1e-17 Score=161.52 Aligned_cols=197 Identities=21% Similarity=0.339 Sum_probs=127.3
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEe---ccCCCeEEEEeCCccCCC-------------------CCeEEc-----ccc
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVG---GDPLPTILWRRDDGKMPT-------------------GRAKIL-----DDR 123 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~---~~p~p~i~W~~~~~~i~~-------------------~~~~~~-----~~~ 123 (633)
.+.+...+..+.+.+|+.++|.|.+. +.+.+.|.|+|++..... ++.... .+.
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 35566778889999999999999997 677778999996653321 233221 236
Q ss_pred eEEEccCCCCCCeEEEEEEEeCCceE--EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeC--CCCCCCCeEEEEEC
Q psy15127 124 SLQIENVGPQDEGLYICDVENLVGSI--SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGP--PKGQPEPTLHWKKN 199 (633)
Q Consensus 124 ~L~i~~v~~~d~G~Y~C~~~n~~g~~--s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~--~~~~p~~~i~W~~~ 199 (633)
.|.|.+++.+|+|.|+|.+.+..+.. +..+.|.|... .|....+.+|+.+.|.|.+ ..+.|.+.+.|+++
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC------CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc------CCCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 89999999999999999999875543 44555555422 4557789999999999995 26789999999984
Q ss_pred CEEeccCCCeeEEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCE
Q psy15127 200 GQFIDLESSKSLDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGS 279 (633)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~ 279 (633)
+...... ...+.... +.+. ..-..++
T Consensus 159 ~~~~~~~-~~~~~~~~--------------------------------------------------~~~~--~~~~~~~- 184 (268)
T 3mj6_A 159 SGSHTEE-ETVLSYDS--------------------------------------------------NMRS--GKFQSLG- 184 (268)
T ss_dssp CTTCSSC-EEEEEEET--------------------------------------------------TSSS--CEEECSS-
T ss_pred CCCCCcc-eeEEEecC--------------------------------------------------CCCc--ccccccc-
Confidence 3211000 00000000 0000 0000000
Q ss_pred EEEeccCCccceEEE-----ccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEe
Q psy15127 280 QVLMFPGNAYGHLHV-----TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVRE 334 (633)
Q Consensus 280 ~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 334 (633)
.-..++.. ..++.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 185 -------~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 185 -------RFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp -------TTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred -------ccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 00011122 2355899999999999999999999999988888888853
No 184
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.76 E-value=2.1e-19 Score=201.70 Aligned_cols=227 Identities=14% Similarity=0.091 Sum_probs=161.8
Q ss_pred CceEEecccccCCEEEEEEE-EcCCcce----eEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeC
Q psy15127 357 LRRIACDLRETDSGLYTCTA-SSESGET----SWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWG 431 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a-~n~~g~~----~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~ 431 (633)
..+.+.+|.+...|.|++.| .|..|.. ..+..+.+...+. .|++|..+.....+++++.|+|+
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~------------~Ps~P~~l~~~~~s~tsI~LsW~ 616 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT------------NPSVPLDPISVSNSSSQIILKWK 616 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC------------CCCCCEEEEEEECSSSCEEEEEE
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC------------CCcCCcceEEEeCCCCEEEEEEe
Confidence 45678899999999999999 8988862 2222233332222 35677778888888999999999
Q ss_pred CCCCCCCCCcceeEEEEEEEEecCCC------------------------------------------------------
Q psy15127 432 EPEPRGGGVAPVIGYTVEYFSSDLQT------------------------------------------------------ 457 (633)
Q Consensus 432 ~~~~~~~~~~~i~~Y~v~~~~~~~~~------------------------------------------------------ 457 (633)
+|... ++.+.+|.|+|+..+...
T Consensus 617 pP~~~---nG~I~~Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~ 693 (897)
T 2dtg_E 617 PPSDP---NGNITHYLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL 693 (897)
T ss_dssp CCCCS---SSSCSEEECCEEEECCCCSCTTCSSSCSCCCCCC--------------------------------------
T ss_pred CCCCC---CCCeeEEEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchh
Confidence 99643 578999999988643210
Q ss_pred ----------CeEEEE--------------------------------EeeeeceEEEecCCCCCeEEEEEEEEeccccC
Q psy15127 458 ----------GWVVAA--------------------------------HRITSTSITVSDLKPDTSYMFIVRAENSHGLG 495 (633)
Q Consensus 458 ----------~~~~~~--------------------------------~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g 495 (633)
.|.... .....+.++|.+|.|++.|.|+|+|.|..|.|
T Consensus 694 ~~~~~~s~~~~W~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g 773 (897)
T 2dtg_E 694 KELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPE 773 (897)
T ss_dssp ------------------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSS
T ss_pred hhhhhhheeeeEEEccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCC
Confidence 111000 00123689999999999999999999999998
Q ss_pred CC-CC-CCCceeecC--CCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 496 IP-SP-VSPITRTLG--LNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 496 ~~-s~-~~~~~~t~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
++ +. ....++|.+ .+|.+|..+ .+..++.++|.|+|++| ...+|.|.+| .|
T Consensus 774 ~~~s~s~~v~~~T~~~~~~p~~P~~l----------------~~~~~~~~sv~LsW~~P--------~~~nG~I~~Y-~V 828 (897)
T 2dtg_E 774 ERCSVAAYVSARTMPEAKADDIVGPV----------------THEIFENNVVHLMWQEP--------KEPNGLIVLY-EV 828 (897)
T ss_dssp CCBCCCCCEEEECCCCCCCCCCCCCC----------------CCCSSSSSCCCCCCCCC--------CSCSSCEEEE-CC
T ss_pred CCCCCCceeEEeccCccCCCCCCcce----------------EEEeCCCCEEEEEECCC--------CCCCCCEEEE-EE
Confidence 75 22 222456665 345666655 67788899999999965 4578899999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+..+. + |... ..........+.++|.+|+|+ .|.|+|+|.|.+|.|++|+
T Consensus 829 ~y~~~~~-~-------~~~~-~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~ 880 (897)
T 2dtg_E 829 SYRRYGD-E-------ELHL-CDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTE 880 (897)
T ss_dssp CCBSSSB-C-------CCCC-CCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCC
T ss_pred EEEECCC-c-------ceEE-EEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCC
Confidence 9987654 2 1110 011112346788999999999 5999999999999999985
No 185
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=2.3e-17 Score=155.94 Aligned_cols=126 Identities=22% Similarity=0.370 Sum_probs=93.4
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC----------------CCCCeEEcc----cceEEEccC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM----------------PTGRAKILD----DRSLQIENV 130 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i----------------~~~~~~~~~----~~~L~i~~v 130 (633)
.+...|..+.+.+|++++|.|. .+.|.+.|.|+|+. ..+ ..+++.... ..+|.|.++
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3556788899999999999999 67888999999952 110 123443332 347999999
Q ss_pred CCCCCeEEEEEEEeCCce-----EEEEEEEEEEeecc-----------ccccCCCceEEecCCcEEEEEeCCCCCCCCeE
Q psy15127 131 GPQDEGLYICDVENLVGS-----ISLRASLTVHLLRD-----------DFRAEPKDTRVASGETALLECGPPKGQPEPTL 194 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~-----~s~~~~l~V~~~~p-----------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 194 (633)
+.+|+|.|.|.+.|..+. ....+.|.|...++ .+...|....+.+|++++|.|. ..+.|.+.+
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~-~~~~p~~~i 159 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCS-YENSAFDYF 159 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEE-CCCTTCCEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEE-EecCCCCcE
Confidence 999999999999987542 12345777776532 4555677788999999999999 578888999
Q ss_pred EEEECC
Q psy15127 195 HWKKNG 200 (633)
Q Consensus 195 ~W~~~~ 200 (633)
.|+|++
T Consensus 160 ~W~k~~ 165 (238)
T 2p1y_A 160 PWYQQF 165 (238)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999863
No 186
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=4.6e-18 Score=160.29 Aligned_cols=128 Identities=19% Similarity=0.193 Sum_probs=92.3
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEEcccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKILDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
..+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|++..+.. .......+..|.|.+++.+|+|.|+|.+.+.
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 457888888877 7999999999999864 4568999999986531 1111123468999999999999999999886
Q ss_pred Cce--EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 146 VGS--ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 146 ~g~--~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
.+. .+..+.|.|... +|.+...+ ...+.+|++++|.|.+ .+. .+.+.|+|+|.
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~-~~~-~~~~~w~k~g~ 139 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRL-DTA-TSMFLLLKEGR 139 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEEC-TTS-CSEEEEEECSS
T ss_pred CccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEec-CCC-CCEEEEEECCC
Confidence 543 356677888753 24444444 3457889999999984 333 34777877764
No 187
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=2.1e-18 Score=160.15 Aligned_cols=133 Identities=19% Similarity=0.263 Sum_probs=95.9
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC----------C---CCCeEEcc---cceEEEccCCCCC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM----------P---TGRAKILD---DRSLQIENVGPQD 134 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i----------~---~~~~~~~~---~~~L~i~~v~~~d 134 (633)
.++..|..+.+.+|++++|.|.+.+.|.+.|.|+|++. .+ . .++..... ...|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 34566788899999999999999998888999998542 11 0 13443332 2489999999999
Q ss_pred CeEEEEEEEeCCceE-EEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEecc
Q psy15127 135 EGLYICDVENLVGSI-SLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFIDL 205 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~~-s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~ 205 (633)
+|.|+|.|.|..+.. ...+.|.|... +|.+...+.......|+.+.|.|.+....|.+ .+.|+++|..+..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 157 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 157 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcc
Confidence 999999999887653 33446777652 25555434333345799999999954336665 8999999987753
No 188
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.75 E-value=1.1e-17 Score=155.32 Aligned_cols=184 Identities=14% Similarity=0.131 Sum_probs=124.7
Q ss_pred CCCCCCCCcEEEEe-eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCC-----CCeEEEEEe--eeeceEEEecCCCC
Q psy15127 408 LFPGPPAAPVILNT-TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQ-----TGWVVAAHR--ITSTSITVSDLKPD 479 (633)
Q Consensus 408 ~~p~~p~~~~~~~~-~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~-----~~~~~~~~~--~~~~~~~i~~L~p~ 479 (633)
.+|++|..+.+... ...++.++|+++.+. +. ...|.|.|+..+.. ..+...... .....+.+.+|.++
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~---~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 78 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPET---HL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLY 78 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCC---SS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTT
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCC---CC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccc
Confidence 35677877777766 578999999998743 33 45699999875421 112211111 12345677799999
Q ss_pred CeEEEEEEEEeccccCCCCCCCCceeecC-CCCCCCcchHHHHHHHhCCceEEeeeeeec------ccceEEEEEEEecC
Q psy15127 480 TSYMFIVRAENSHGLGIPSPVSPITRTLG-LNSLVPQHLLDEARARLGTKVVNLRELIPT------ASTAVRITWEVSWG 552 (633)
Q Consensus 480 ~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~si~v~W~~p~~ 552 (633)
+.|.|+|.|.|..|.+.. ... .+.+.. ..|.+|.++ .+... +.+++.|+|++|
T Consensus 79 ~~Y~~~V~A~N~~G~~~s-~~~-~~~~~~~v~p~pP~~~----------------~~~~~~~~~~~~~~~~~l~W~~p-- 138 (215)
T 1cd9_B 79 QYMAIWVQAENMLGSSES-PKL-CLDPMDVVKLEPPMLQ----------------ALDIGPDVVSHQPGCLWLSWKPW-- 138 (215)
T ss_dssp SCEEEEEEEEETTEEEEC-CCE-EECGGGGBCCCCCEEE----------------ECCC-------CCSCEEEEEECC--
T ss_pred eEEEEEEEEECCCCCccC-ccE-EEchHHceEeCCCcEE----------------EEEEeccccCCCCCeEEEEEeCC--
Confidence 999999999999998742 222 233333 234444444 55555 678999999954
Q ss_pred CCcccccchhhhhcceeEEEEE-EcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccccccccc
Q psy15127 553 SVPQHLLDEARARLGTKVVNLR-ELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 553 ~~p~~~~~~~~~i~~y~~i~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
...+..+.+| .|+|+ ..+.. .|..+.. ..+..+.++|.+|+|++.|.|+|+|.|..|.|.+
T Consensus 139 ------~~~~~~~l~Y-~v~y~~~~~~~-------~w~~~~~----~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~w 200 (215)
T 1cd9_B 139 ------KPSEYMEQEC-ELRYQPQLKGA-------NWTLVFH----LPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFW 200 (215)
T ss_dssp ------GGGTTSCEEE-EEEEEESSTTC-------CCEEEEE----EESCEEEEEECCCCSCSCEEEEEEEEESSSCCCC
T ss_pred ------CCCCeEEEEE-EEEEccCCCCC-------CcEEEec----ccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCC
Confidence 2233344899 99999 55443 3754321 1234688999999999999999999999999876
Q ss_pred CC
Q psy15127 632 LD 633 (633)
Q Consensus 632 s~ 633 (633)
|+
T Consensus 201 S~ 202 (215)
T 1cd9_B 201 SP 202 (215)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 189
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.75 E-value=1.1e-17 Score=155.35 Aligned_cols=132 Identities=17% Similarity=0.232 Sum_probs=88.0
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCC-------------CCCeEEcc---cceEEEccCCCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMP-------------TGRAKILD---DRSLQIENVGPQ 133 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~-------------~~~~~~~~---~~~L~i~~v~~~ 133 (633)
|.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+. .+++.... +.+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45667788899999999999999999889999999953 2110 23433332 247999999999
Q ss_pred CCeEEEEEEEeCCc---eEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEe
Q psy15127 134 DEGLYICDVENLVG---SISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFI 203 (633)
Q Consensus 134 d~G~Y~C~~~n~~g---~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~ 203 (633)
|+|.|+|.|.|..+ .....+.|.|... +|.+...+....+.+|+.++|.|.+..+.|.+.+.|+++|..+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~ 156 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQ 156 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccC
Confidence 99999999998766 3344455666432 1333332333334456666777763222566666666666544
No 190
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.74 E-value=3.8e-18 Score=157.98 Aligned_cols=130 Identities=18% Similarity=0.241 Sum_probs=92.9
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccCCCCCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENVGPQDE 135 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v~~~d~ 135 (633)
+.. |..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ..+++.... ...|.|.+++.+|+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 444 88899999999999999999888899999953 221 013433332 24899999999999
Q ss_pred eEEEEEEEeCCceE-EEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEec
Q psy15127 136 GLYICDVENLVGSI-SLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFID 204 (633)
Q Consensus 136 G~Y~C~~~n~~g~~-s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~ 204 (633)
|.|+|.|.|..+.. ...+.|.|... +|.+...+....+..|+.+.|.|.+....|.+ .|.|+++|..+.
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~ 155 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERR 155 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCC
Confidence 99999999876642 33446777652 25554433333345799999999954335554 899999988764
No 191
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.74 E-value=4.9e-17 Score=145.57 Aligned_cols=83 Identities=16% Similarity=0.259 Sum_probs=66.1
Q ss_pred CCceEEEcCCeEEEEEEEe--ccCCCeEEEEe--CCccC-----------CCCCeEEcccceEEEccCCCCCCeEEEEEE
Q psy15127 78 PSDATVLSGSVVEFVCRVG--GDPLPTILWRR--DDGKM-----------PTGRAKILDDRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~--~~p~p~i~W~~--~~~~i-----------~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
+..+.+.+|++++|.|... +.+.+.|.|+| ++..| ..++..+..+++|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 4457789999999999542 24567899999 88765 345777778889999999999999999999
Q ss_pred EeCCceE--EEEEEEEEEee
Q psy15127 143 ENLVGSI--SLRASLTVHLL 160 (633)
Q Consensus 143 ~n~~g~~--s~~~~l~V~~~ 160 (633)
.|..|.. +..+.|.|..+
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EETTSCEEEEEEEEEEEECC
T ss_pred EeCCCceeEEEEEEEEEcCc
Confidence 9988764 35667777754
No 192
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.74 E-value=4.4e-18 Score=158.56 Aligned_cols=132 Identities=24% Similarity=0.348 Sum_probs=94.4
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCC--ccC-----------------CCCCeEEc---ccceEEEc
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDD--GKM-----------------PTGRAKIL---DDRSLQIE 128 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~--~~i-----------------~~~~~~~~---~~~~L~i~ 128 (633)
|.+...| .+.+.+|++++|.|.+.+. |.+.+.|+|+. ... ..+++... .+.+|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4555566 8899999999999999988 88999999932 110 01233322 23569999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 129 NVGPQDEGLYICDVENLVG-----SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
+++.+|+|.|.|.|.+..| .....+.|.|... +|.+...+....+..|+.+.|.|.+..+.|.+ .|.|+++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 9999999999999998775 3345567888742 24554444444455689999999954336766 8999999
Q ss_pred CEEec
Q psy15127 200 GQFID 204 (633)
Q Consensus 200 ~~~~~ 204 (633)
|..+.
T Consensus 161 g~~l~ 165 (218)
T 3s96_B 161 GTPIT 165 (218)
T ss_dssp TEEC-
T ss_pred CEECc
Confidence 88765
No 193
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=162.42 Aligned_cols=166 Identities=14% Similarity=0.064 Sum_probs=101.5
Q ss_pred CcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHH
Q psy15127 440 VAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLD 519 (633)
Q Consensus 440 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~ 519 (633)
+..+..|.|++.... ..+.........+.+++.+|.|++.|.|+|+|.|..|.|+++.... +.+....|..++..
T Consensus 19 ~~~Vt~Y~~~~~~~~--~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~-~~t~~~~~~~~~~~-- 93 (232)
T 4go6_B 19 NVMVTHYFLPPDDAV--PSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISA-FKTCLPGFPGAPCA-- 93 (232)
T ss_dssp EEEECEEECCCC--------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEE-EECCCTTSCCCCEE--
T ss_pred CEEEEEEEEEeeCCC--CCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCcccccccee-eeecCCCCCCCCee--
Confidence 567888988765432 2222222333457899999999999999999999999999887763 44433333333333
Q ss_pred HHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccc------eeeeeeccce
Q psy15127 520 EARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTA------VRITWEKYNM 593 (633)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~------~~~~w~~~~~ 593 (633)
.....+.+++.|+|.+| ...+|.|++| .|+|+......... ....|.....
T Consensus 94 --------------~~~~~~~~sv~l~W~~P--------~~~~G~i~~Y-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (232)
T 4go6_B 94 --------------IKISKSPDGAHLTWEPP--------SVTSGKIIEY-SVYLAIQSSQAGGELKSSTPAQLAFMRVYC 150 (232)
T ss_dssp --------------EEEEEETTEEEEEEECC--------SCCSSCCCEE-EEEEEEC-------------CCEEEEEEEE
T ss_pred --------------eEEecCCCEEEEEEeCC--------CCCCCceeeE-EEEEEECCCCCcceeeeccCCceeeEEEEe
Confidence 34556789999999965 5668899999 99998765543110 0112332211
Q ss_pred eE---eecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 594 AT---VMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 594 ~~---~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.. .........+.+.+|.+++.|.|+|+|.|.+|.|++|+
T Consensus 151 ~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 151 GPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp ESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEE
T ss_pred ccCceEEEEccccEEeeecCccCCceEEEEEEECCCcCCCCcc
Confidence 10 11112233445678999999999999999999999874
No 194
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.74 E-value=4.4e-17 Score=149.53 Aligned_cols=148 Identities=24% Similarity=0.302 Sum_probs=116.6
Q ss_pred cccCCCCCCCCCC-ccccccceeeEEEEecccCC---CCCceEEeeCceEEEcCCCC--CCeEEEEEEe-----------
Q psy15127 5 LDTNHAHPMSSPR-AEIEPATRTNRVSISGDPGF---DSRRSRSIFGSVLGARGALS--DDQWKLIAKE----------- 67 (633)
Q Consensus 5 ~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~----------- 67 (633)
+.+.|....+.|. +.|+| ..++.+.. +.++.....+++|.|.+++. +|.|+|.+.+
T Consensus 26 v~L~C~~~~~~p~~~~v~W-------~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~ 98 (201)
T 3s97_C 26 MVLLCDPPYHFPDDLSYRW-------LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 98 (201)
T ss_dssp EEECCCCCSEESSCCEEEE-------EESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCC
T ss_pred EEEeccccccCCCceEEEE-------EECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcc
Confidence 3344443445565 67774 44555542 33444445578899999998 9999999998
Q ss_pred -----------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCe
Q psy15127 68 -----------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEG 136 (633)
Q Consensus 68 -----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G 136 (633)
...+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.........++.|.|.+++.+|+|
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 178 (201)
T 3s97_C 99 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEG 178 (201)
T ss_dssp EEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCCGGGCE
T ss_pred cceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCChhhCE
Confidence 013566666667888999999999999999999999999999988776666666789999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEe
Q psy15127 137 LYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 137 ~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
.|+|.|.|..|..+..+.|.|.+
T Consensus 179 ~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 179 IYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEecCCceeeeEEEEEeC
Confidence 99999999999999999888863
No 195
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.74 E-value=5.6e-18 Score=156.94 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=93.8
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC--CccC-------------CCCCeEEc---ccceEEEccCCCCC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD--DGKM-------------PTGRAKIL---DDRSLQIENVGPQD 134 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--~~~i-------------~~~~~~~~---~~~~L~i~~v~~~d 134 (633)
.+...| .+.+.+|++++|.|.+. +.+.+.|+|+ +..+ ..+++... .+.+|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 3 ALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDD 79 (211)
T ss_dssp CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGG
T ss_pred eEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhH
Confidence 344445 88899999999999998 7889999994 2222 11233322 23579999999999
Q ss_pred CeEEEEEEEeCCc--eEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCC-CCCeEEEEECCEEec
Q psy15127 135 EGLYICDVENLVG--SISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQ-PEPTLHWKKNGQFID 204 (633)
Q Consensus 135 ~G~Y~C~~~n~~g--~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~i~W~~~~~~~~ 204 (633)
+|.|+|.+.+..+ .....+.|.|.. .+|.+...+....+..|+.+.|.|.+.... |.+.+.|+++|..+.
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 155 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK 155 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecC
Confidence 9999999999887 355667788873 125555555554455799999999953323 357999999988775
No 196
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=2.5e-17 Score=156.83 Aligned_cols=126 Identities=17% Similarity=0.161 Sum_probs=91.0
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCCCe-----EEEEeCCccCCC---------C-------CeEE------cccceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPLPT-----ILWRRDDGKMPT---------G-------RAKI------LDDRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~p~-----i~W~~~~~~i~~---------~-------~~~~------~~~~~L~i~ 128 (633)
..|..+.+.+|++++|.|.+.+.|.+. |.|+|++..... . +... ..+.+|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 456677899999999999998887765 999997543211 0 1000 012459999
Q ss_pred cCCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEe
Q psy15127 129 NVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFI 203 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 203 (633)
+++.+|+|.|+|.+.+..+.....+.|.|..+ |.+...+. ..+..|+.+.|.|.+..+.|.+ .|.|+++|..+
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~-P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS-PASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC-CEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecC-CceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 99999999999999999888888899999986 66665554 3345677888999954338888 99999998644
No 197
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.73 E-value=1.6e-17 Score=159.45 Aligned_cols=251 Identities=13% Similarity=0.141 Sum_probs=102.8
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccCCCe-EEEEeC--CccC-CCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDPLPT-ILWRRD--DGKM-PTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSIS 150 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p~p~-i~W~~~--~~~i-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s 150 (633)
...|+...+.+|+++.|.|.+. .+.|. +.|.-. ...+ ..+. ....|.|.+++.+ |.|+|.+.......+
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~g~----~~~~~~l~~v~~~--~~y~C~~~~~~~~~~ 75 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLPGN----NRKVYELSNVQED--SQPMCYSNCPDGQST 75 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCCCSCS----SEEEEEEESCCSC--CCCEEEEECSSCEEE
T ss_pred EEeCCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccccCCC----ceEEEEEEecccC--CeEEEEEEcCCccEE
Confidence 4567788999999999999996 45554 888642 1111 1111 1125788888853 469999975444577
Q ss_pred EEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC--eEEEEECCEEeccCCCeeEEeccceeee----EEEe
Q psy15127 151 LRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP--TLHWKKNGQFIDLESSKSLDLSRRTLGW----LRVR 224 (633)
Q Consensus 151 ~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 224 (633)
+.+.|.|..+|..+.+.+....+.+|+.++|.|.+..+.|.. .|+|+|+++.+...... .......+.+ ....
T Consensus 76 ~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~-~~~~~~~l~~~~~~~D~g 154 (291)
T 1mq8_A 76 AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-GEPAEVTTTVLVRRDHHG 154 (291)
T ss_dssp EECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC-BTTEEEEEECCCSSSCSS
T ss_pred EEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC-CCCceEEEEeeeeeccCC
Confidence 888999998855566666656688999999999977777765 69999999877533210 0000011111 1112
Q ss_pred eeEEEEeecCCCC----------CCccc-cccc--c-e----eEEecCCceEEEEEEEeeecCC---eeEEEECCEEEEe
Q psy15127 225 PLYWNVARPRANL----------NPRYI-GRKM--A-S----LLIWNHPRVNRLSCFAEGSPLP---SVFWTQEGSQVLM 283 (633)
Q Consensus 225 g~y~C~a~~~~~~----------~p~~~-~~~~--~-~----~~~~~~g~~~~l~C~~~g~p~~---~v~W~~~g~~~~~ 283 (633)
+.|+|.|.+..+. .+... +.-. . . ...+.+|+.++|.|.+.|++++ .+.|+++|+.+..
T Consensus 155 ~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 155 ANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp CEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------------------
T ss_pred ceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCc
Confidence 5999999986441 10000 0000 0 0 0135689999999999998665 6999999987742
Q ss_pred ccCCccceEEEccCceEEEcCC---CCCC--CeEEEEEEEeCCceeEEEEEEEEEecccCCCceEE
Q psy15127 284 FPGNAYGHLHVTQEGTLRIQGV---QKED--AGFFVCSALSVAGSTTVRAFLQVREFCVLPKGTFT 344 (633)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~i~~~---~~~d--~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~p~~~ 344 (633)
. . ......+.+... ..++ .+.|+|.|.+.....+....|.|.+ .|.|.++
T Consensus 235 ~-------~-~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~---~~~~~~~ 289 (291)
T 1mq8_A 235 T-------V-TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS---FPAPNVI 289 (291)
T ss_dssp ------------------------------------------------------------------
T ss_pred e-------e-eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc---CCCccEE
Confidence 1 0 111223444333 2433 5677788877544455666666653 4555443
No 198
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.73 E-value=1.9e-17 Score=152.06 Aligned_cols=129 Identities=20% Similarity=0.259 Sum_probs=92.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe---EE--cccceEEEccCCCCCCeEEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA---KI--LDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~---~~--~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
..+|.|...|. ..+.+|++++|.|.+. .+.+.+.|+|+|..+..... .. ..++.|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 45788887776 6789999999999997 46789999999987642111 01 134689999999999999999998
Q ss_pred eCC-----ceEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEE
Q psy15127 144 NLV-----GSISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQF 202 (633)
Q Consensus 144 n~~-----g~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~ 202 (633)
+.. ...+..+.|.|... +|.+...+. ..+.+|+.++|.|.+ .+ +.+.+.|+|+|..
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~ 146 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSS-RS-SYDMYHLSREGEA 146 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEE-SS-CCSEEEEEETTCS
T ss_pred cCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeC-CC-CCceEEEEECCcc
Confidence 642 12356677777753 244444443 467788888888883 43 4567888877653
No 199
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.73 E-value=8.8e-17 Score=149.19 Aligned_cols=124 Identities=27% Similarity=0.401 Sum_probs=86.9
Q ss_pred eeeCCCceEEEcCCeEEEEEEEecc-------CCCeEEEEeCCcc------C------------CCCCeEEcc-----cc
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGD-------PLPTILWRRDDGK------M------------PTGRAKILD-----DR 123 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~-------p~p~i~W~~~~~~------i------------~~~~~~~~~-----~~ 123 (633)
.+..|..+.+.+|++++|.|.+.+. +.+.+.|+|++.. + ..++..... +.
T Consensus 3 ~~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 82 (214)
T 2zg1_A 3 ELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNC 82 (214)
T ss_dssp EEECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBC
T ss_pred eeeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeE
Confidence 4566788999999999999999754 4678999998652 1 123444432 34
Q ss_pred eEEEccCCCCCCeEEEEEEEeCCce-E---EEEEEEEEEeec--cccccCCCceEEecCCcEEEEEeCCCC---CCCCeE
Q psy15127 124 SLQIENVGPQDEGLYICDVENLVGS-I---SLRASLTVHLLR--DDFRAEPKDTRVASGETALLECGPPKG---QPEPTL 194 (633)
Q Consensus 124 ~L~i~~v~~~d~G~Y~C~~~n~~g~-~---s~~~~l~V~~~~--p~~~~~~~~~~~~~g~~~~l~C~~~~~---~p~~~i 194 (633)
+|.|.+++.+|+|.|.|.+.+..+. . +..+.|.|..++ |.+.. +. .+.+|+.++|.|.+... .|.+.+
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v 159 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTF 159 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEE
T ss_pred EEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceE
Confidence 7999999999999999999987633 2 246778887752 33322 22 25688999999984322 366777
Q ss_pred EEEECC
Q psy15127 195 HWKKNG 200 (633)
Q Consensus 195 ~W~~~~ 200 (633)
.|++++
T Consensus 160 ~W~~~~ 165 (214)
T 2zg1_A 160 SWTGNA 165 (214)
T ss_dssp EEESST
T ss_pred EEeCCC
Confidence 777765
No 200
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.73 E-value=1.7e-17 Score=161.91 Aligned_cols=184 Identities=16% Similarity=0.139 Sum_probs=120.7
Q ss_pred ceEEEcCCCC--CCeEEEEEEe-------------cCc----CCeeeeCCCc--eEEEcCCeEEEEEEEeccCCCeEEEE
Q psy15127 48 SVLGARGALS--DDQWKLIAKE-------------ALI----KPFPISEPSD--ATVLSGSVVEFVCRVGGDPLPTILWR 106 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~-------------v~~----~p~~~~~~~~--~~~~~G~~~~L~C~~~~~p~p~i~W~ 106 (633)
++|.|.+++. +|.|+|.|.| +.. .|.+...+.. +.+.+|+.+.|.|.+. .|.+.++|+
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~ 129 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLH 129 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEE
Confidence 5799999998 9999999987 111 1111111111 5688999999999998 678899999
Q ss_pred eCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEe-eccccccCCCceEEecCCcEEEEEe
Q psy15127 107 RDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI-SLRASLTVHL-LRDDFRAEPKDTRVASGETALLECG 184 (633)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~-~~p~~~~~~~~~~~~~g~~~~l~C~ 184 (633)
+++........... ...+. ...|+|.|+|.|.|..+.. +..+.|.|.. .+|.+...+....+.+|+.+.|.|.
T Consensus 130 ~~~~~~~~~~~~~~-~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~ 204 (289)
T 3mjg_X 130 EKKGDVALPVPYDH-QRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCI 204 (289)
T ss_dssp ESSCCSCCCCCEET-TTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEE
T ss_pred eCCCCCccceeecC-CcCee----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEE
Confidence 87532222111111 11222 3679999999999877653 4445677765 2366666666778999999999999
Q ss_pred CCCCCCCCeEEEEECCEEeccCCCeeEEe-------ccceeeeE----EEeeeEEEEeecCCCCC
Q psy15127 185 PPKGQPEPTLHWKKNGQFIDLESSKSLDL-------SRRTLGWL----RVRPLYWNVARPRANLN 238 (633)
Q Consensus 185 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~-------~~~~~~~~----~~~g~y~C~a~~~~~~~ 238 (633)
+.+.|.+.+.|++++............. ....|.+. ...|.|+|.|.|..+..
T Consensus 205 -~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 268 (289)
T 3mjg_X 205 -VIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH 268 (289)
T ss_dssp -EESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTE
T ss_pred -ECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCc
Confidence 5789999999998765433211111111 01122221 12489999999998754
No 201
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.73 E-value=1.4e-17 Score=153.06 Aligned_cols=121 Identities=22% Similarity=0.392 Sum_probs=88.2
Q ss_pred ceEEEcCCeEEEEEEEe----ccCCCeEEEEeCCccCC-------------CCCeEE--cccceEEEccCCCCCCeEEEE
Q psy15127 80 DATVLSGSVVEFVCRVG----GDPLPTILWRRDDGKMP-------------TGRAKI--LDDRSLQIENVGPQDEGLYIC 140 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~----~~p~p~i~W~~~~~~i~-------------~~~~~~--~~~~~L~i~~v~~~d~G~Y~C 140 (633)
.+.+.+|++++|.|.+. +.|.+.+.|++++..+. .++... ..+..|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 46789999999999985 34677899999988652 122222 234689999999999999999
Q ss_pred EEEeCCceE-----EEEEEEEEEeeccccccCCCce--EEecCCcEEEEEeCCCCCCCCeEEEEECCEEec
Q psy15127 141 DVENLVGSI-----SLRASLTVHLLRDDFRAEPKDT--RVASGETALLECGPPKGQPEPTLHWKKNGQFID 204 (633)
Q Consensus 141 ~~~n~~g~~-----s~~~~l~V~~~~p~~~~~~~~~--~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 204 (633)
.|.|..|.. ...+.|.|..+.+ .|... ....|+.+.|.|.+..|.|.|.|.|+++|..+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~----~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFP----TPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCC----CCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCC----CCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 999976542 4566677765421 11111 124588899999954688999999999887665
No 202
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.73 E-value=7.6e-17 Score=154.13 Aligned_cols=126 Identities=17% Similarity=0.291 Sum_probs=94.6
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC--------------CCCCeEEc-----ccceEEEccC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM--------------PTGRAKIL-----DDRSLQIENV 130 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i--------------~~~~~~~~-----~~~~L~i~~v 130 (633)
..+...|..+.+.+|++++|.|.+.+.|.+.+.|+|.. ... ..+++... .+.+|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45667788899999999999999998899999999843 111 02233331 2347999999
Q ss_pred CCCCCeEEEEEEEeCCce----EEEEEEEEEEe-------------------eccccccCCCceEEecCCcEEEEEeCCC
Q psy15127 131 GPQDEGLYICDVENLVGS----ISLRASLTVHL-------------------LRDDFRAEPKDTRVASGETALLECGPPK 187 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~----~s~~~~l~V~~-------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~ 187 (633)
+.+|+|.|.|.+.+..+. ....+.|.|.. .++.+...|....+.+|+.++|.|.+ .
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~ 162 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQ-T 162 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEE-C
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEc-C
Confidence 999999999999987542 23345677775 23567777888888899999999995 4
Q ss_pred CCCCCeEEEEEC
Q psy15127 188 GQPEPTLHWKKN 199 (633)
Q Consensus 188 ~~p~~~i~W~~~ 199 (633)
+. .+.+.|+|.
T Consensus 163 ~~-~~~v~W~k~ 173 (256)
T 3tf7_C 163 NS-HNYMYWYRQ 173 (256)
T ss_dssp SC-CSEEEEEEE
T ss_pred CC-ceEEEEEEE
Confidence 54 679999984
No 203
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.73 E-value=2.4e-16 Score=142.53 Aligned_cols=127 Identities=18% Similarity=0.311 Sum_probs=98.7
Q ss_pred CeeeeCCCc-eEEEcCCeEEEEEEEeccCCC--eEEEEeCCccCCCCCeE-EcccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 72 PFPISEPSD-ATVLSGSVVEFVCRVGGDPLP--TILWRRDDGKMPTGRAK-ILDDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 72 p~~~~~~~~-~~~~~G~~~~L~C~~~~~p~p--~i~W~~~~~~i~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
+.....+.. +.+..|++++|.|.+ +.|.| .|+|++.+..+ ++.. ......|.|.+++.+|+|.|.|.|.|..+
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 83 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGR 83 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEEecCCccEEEECccCcccCceEEEEEEeCCC
Confidence 343444433 589999999999999 88888 99999976665 3322 23356899999999999999999999988
Q ss_pred eEEEEEEEEEEeecccc-ccCCCceEEecCCcEEEEEeCCCCCCC----CeEEEEECCEEecc
Q psy15127 148 SISLRASLTVHLLRDDF-RAEPKDTRVASGETALLECGPPKGQPE----PTLHWKKNGQFIDL 205 (633)
Q Consensus 148 ~~s~~~~l~V~~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~----~~i~W~~~~~~~~~ 205 (633)
..+..+.|+|..+ |.. .+.+. ....|+.+ |.|.+....|. ++|.|+|++..+..
T Consensus 84 ~~~~~~~ltV~~~-P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 84 TFQHTVQLLVYAF-PNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp EEEEEEEEEEEBC-CSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred ceEEEEEEEEEec-CCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 8889999999998 543 33332 56678888 99995444574 49999999998853
No 204
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.73 E-value=6.1e-18 Score=155.33 Aligned_cols=56 Identities=16% Similarity=0.316 Sum_probs=46.5
Q ss_pred EEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEe
Q psy15127 83 VLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 83 ~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
+.+|++++|.|.+ |.+.|+|+|+|..+... ...+++|.|.+++.+|+|.|+|.+.+
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~---~~~~~~L~i~~v~~~DsG~Y~C~~~~ 70 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL---TEDKKKWNLGSNAKDPRGMYQCKGSQ 70 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE---ESSCCCEEEEEGGGCCEEEEEEESSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC---CCCCCeEEeCCCCcCCCEEEEEEecC
Confidence 3689999999988 78899999999877432 12456899999999999999999754
No 205
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.73 E-value=1.5e-17 Score=155.55 Aligned_cols=125 Identities=21% Similarity=0.367 Sum_probs=86.9
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCCC---eEEEEeCCccCC-----------------CCCeEE----------cccceE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPLP---TILWRRDDGKMP-----------------TGRAKI----------LDDRSL 125 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~p---~i~W~~~~~~i~-----------------~~~~~~----------~~~~~L 125 (633)
..|+.+.+..|++++|.|.+.+.+.+ .|+|+|++..+. .++... ..+.+|
T Consensus 6 ~vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL 85 (225)
T 4fmk_A 6 RVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATL 85 (225)
T ss_dssp ECCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCE
T ss_pred EeCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEE
Confidence 44667889999999999999877665 389999875331 111111 123579
Q ss_pred EEccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 126 QIENVGPQDEGLYICDVENLVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 126 ~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
.|.+++.+|+|.|+|.|.+..+.. .....+.+..+ |.....+.......++.+.+.|.+..+.|++.+.|++++.
T Consensus 86 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~ 161 (225)
T 4fmk_A 86 AFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ-PENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLG 161 (225)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-CEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSC
T ss_pred EEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecC-CceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCc
Confidence 999999999999999999887764 44444555554 5444444445556677777777756677777888877654
No 206
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.73 E-value=4.2e-18 Score=159.20 Aligned_cols=175 Identities=19% Similarity=0.323 Sum_probs=119.5
Q ss_pred CceEEEcCCeEEEEEEEeccCC-----CeEEEEeCCccC--------------CCCCeEEcc------cceEEEccCCCC
Q psy15127 79 SDATVLSGSVVEFVCRVGGDPL-----PTILWRRDDGKM--------------PTGRAKILD------DRSLQIENVGPQ 133 (633)
Q Consensus 79 ~~~~~~~G~~~~L~C~~~~~p~-----p~i~W~~~~~~i--------------~~~~~~~~~------~~~L~i~~v~~~ 133 (633)
..+.+.+|++++|.|.+.+.+. +.+.|++++... ..++..... +..|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3566889999999999987654 689999987543 123333333 568999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEEeec--cccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEEC-CEEeccCCCee
Q psy15127 134 DEGLYICDVENLVGSISLRASLTVHLLR--DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKN-GQFIDLESSKS 210 (633)
Q Consensus 134 d~G~Y~C~~~n~~g~~s~~~~l~V~~~~--p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~~~~~~~~ 210 (633)
|+|.|+|.+.+. +..+..+.|.|..++ |.+...+ ...+.+|+.+.|.|.+..+.|.+.+.|+++ +..+.....
T Consensus 83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~-- 158 (222)
T 4i0k_A 83 DEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT-- 158 (222)
T ss_dssp GCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE--
T ss_pred cCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc--
Confidence 999999999985 344555666666542 3333333 346778999999999547888899999873 332210000
Q ss_pred EEeccceeeeEEEeeeEEEEeecCCCCCCcccccccceeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccc
Q psy15127 211 LDLSRRTLGWLRVRPLYWNVARPRANLNPRYIGRKMASLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYG 290 (633)
Q Consensus 211 ~~~~~~~~~~~~~~g~y~C~a~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~ 290 (633)
.
T Consensus 159 -------------------------------------------------------------~------------------ 159 (222)
T 4i0k_A 159 -------------------------------------------------------------T------------------ 159 (222)
T ss_dssp -------------------------------------------------------------E------------------
T ss_pred -------------------------------------------------------------e------------------
Confidence 0
Q ss_pred eEEEccCc---eEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEEecc
Q psy15127 291 HLHVTQEG---TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVREFC 336 (633)
Q Consensus 291 ~~~~~~~~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 336 (633)
......++ .|.|.++..+|.|.|+|.|.|..|.....+.|.|.+.+
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 00001111 36788889999999999999999999999999887543
No 207
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=4.7e-17 Score=155.68 Aligned_cols=122 Identities=19% Similarity=0.273 Sum_probs=89.5
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC-----------------CCCCeEEcc-----cceEEEcc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM-----------------PTGRAKILD-----DRSLQIEN 129 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~-----~~~L~i~~ 129 (633)
.+|....+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ..+++.... ..+|+|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNS 84 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEES
T ss_pred ECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECC
Confidence 445567899999999999999875 6789999962 211 123444432 24899999
Q ss_pred CCCCCCeEEEEEEEeCCc-------e--EEEEEEEEEEeec--------------cccccCCCceEEecCCcEEEEEeCC
Q psy15127 130 VGPQDEGLYICDVENLVG-------S--ISLRASLTVHLLR--------------DDFRAEPKDTRVASGETALLECGPP 186 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g-------~--~s~~~~l~V~~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~ 186 (633)
++.+|+|.|.|.|.|..| . ....+.|.|...+ +.+...+....+.+|++++|.|. .
T Consensus 85 v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~-~ 163 (257)
T 1f3r_B 85 LQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCK-G 163 (257)
T ss_dssp CCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEE-C
T ss_pred CCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEE-E
Confidence 999999999999998853 1 2234577777641 23444566667889999999999 5
Q ss_pred CCCCCCeEEEEE
Q psy15127 187 KGQPEPTLHWKK 198 (633)
Q Consensus 187 ~~~p~~~i~W~~ 198 (633)
.+.|.+.+.|+|
T Consensus 164 ~~~~~~~v~W~k 175 (257)
T 1f3r_B 164 SQNINNYLAWYQ 175 (257)
T ss_dssp SSCCBTCEEEEE
T ss_pred CCcCCCcEEEEE
Confidence 777778999998
No 208
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=5.5e-17 Score=154.29 Aligned_cols=122 Identities=20% Similarity=0.342 Sum_probs=90.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCCc--cC------------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDDG--KM------------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~~--~i------------------~~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.| .+.|.|+|+.. .+ ..++..... ..+|.|.
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (247)
T 2ghw_B 7 VQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMN 86 (247)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEEC
Confidence 344568899999999999999876 57899998431 10 123444332 2479999
Q ss_pred cCCCCCCeEEEEEEEeCCce--EEEEEEEEEEee--------------ccccccCCCceEEecCCcEEEEEeCCCCCCCC
Q psy15127 129 NVGPQDEGLYICDVENLVGS--ISLRASLTVHLL--------------RDDFRAEPKDTRVASGETALLECGPPKGQPEP 192 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g~--~s~~~~l~V~~~--------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 192 (633)
+++.+|+|.|+|.|.|..+. ....+.|.|... ++.+...+....+.+|++++|.|. ..+.|.+
T Consensus 87 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~-~~~~~~~ 165 (247)
T 2ghw_B 87 SLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCR-ASQSVRS 165 (247)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEE-ESSCCTT
T ss_pred cCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEE-eCCCccc
Confidence 99999999999999987332 234457777753 233455666778899999999999 5777888
Q ss_pred eEEEEE
Q psy15127 193 TLHWKK 198 (633)
Q Consensus 193 ~i~W~~ 198 (633)
.+.|+|
T Consensus 166 ~v~W~k 171 (247)
T 2ghw_B 166 NLAWYQ 171 (247)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999998
No 209
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.72 E-value=1.3e-16 Score=152.13 Aligned_cols=127 Identities=20% Similarity=0.279 Sum_probs=91.3
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccC---------------CCCCeEEcc---cceEEEccCCCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKM---------------PTGRAKILD---DRSLQIENVGPQ 133 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i---------------~~~~~~~~~---~~~L~i~~v~~~ 133 (633)
+.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|+.... ..+++.... +.+|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 45667788889999999999999999999999999953210 122332222 237999999999
Q ss_pred CCeEEEEEEEeCCce-EEEEEEEEEEee------------------ccccccCCCceEEecCCcEEEEEeCCCCCC--CC
Q psy15127 134 DEGLYICDVENLVGS-ISLRASLTVHLL------------------RDDFRAEPKDTRVASGETALLECGPPKGQP--EP 192 (633)
Q Consensus 134 d~G~Y~C~~~n~~g~-~s~~~~l~V~~~------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~ 192 (633)
|+|.|.|.+.|..+. ......|.|..+ ++.+...+....+.+|+.++|.|. ..+.+ .+
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~-~~~~~~~~~ 163 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCK-DSGYAFSSS 163 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEE-CCSTTGGGS
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEE-ecCCcccCC
Confidence 999999999987554 234446677653 133444556677889999999999 56655 67
Q ss_pred eEEEEEC
Q psy15127 193 TLHWKKN 199 (633)
Q Consensus 193 ~i~W~~~ 199 (633)
.+.|+|+
T Consensus 164 ~v~W~k~ 170 (250)
T 3esu_F 164 WMNWVKQ 170 (250)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999986
No 210
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.72 E-value=8.7e-17 Score=148.95 Aligned_cols=144 Identities=18% Similarity=0.207 Sum_probs=110.2
Q ss_pred CCCCCCCCccccccceeeEEEEecccCCCCCceEEeeC---ceEEEcCCCC--CCeEEEEEEe----------c--Cc--
Q psy15127 10 AHPMSSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFG---SVLGARGALS--DDQWKLIAKE----------A--LI-- 70 (633)
Q Consensus 10 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~----------v--~~-- 70 (633)
.....+|.+.|+| ..+|.+...+.++.+... ..|.|.+++. +|.|+|.|.| + ..
T Consensus 25 ~~~~~~p~~~i~W-------~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~ 97 (212)
T 2r15_A 25 FVTYYVEDLKVNW-------SHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYD 97 (212)
T ss_dssp EBSSCCSSCEEEE-------EETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHH
T ss_pred EEeccCCCceEEE-------EECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeecc
Confidence 3333346777774 445666666667665443 3499999999 9999999988 1 10
Q ss_pred ------------------CCee-eeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc-----cceEE
Q psy15127 71 ------------------KPFP-ISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD-----DRSLQ 126 (633)
Q Consensus 71 ------------------~p~~-~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~-----~~~L~ 126 (633)
+|.+ ...|....+.+|+.+.|.|.+.+.|.|.+.|+|++..+..+...... ...|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~ 177 (212)
T 2r15_A 98 EAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFT 177 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEE
T ss_pred chhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEE
Confidence 3434 34466678999999999999999999999999999988754332222 13899
Q ss_pred EccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 127 IENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
|.+++.+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 178 i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 178 INGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 9999999999999999999999999999988764
No 211
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.71 E-value=4.1e-17 Score=155.77 Aligned_cols=125 Identities=18% Similarity=0.314 Sum_probs=92.2
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeC--CccC------------------CCCCeEEccc-----ceEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRD--DGKM------------------PTGRAKILDD-----RSLQ 126 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~--~~~i------------------~~~~~~~~~~-----~~L~ 126 (633)
++..|..+.+.+|++++|.|.+.+.+ .+.+.|+|. +..+ ..+++....+ .+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 45677888999999999999998754 678999993 2111 1134443322 2499
Q ss_pred EccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEee--------------ccccccCCCceEEecCCcEEEEEeCCCCCCC
Q psy15127 127 IENVGPQDEGLYICDVENLVGSI-SLRASLTVHLL--------------RDDFRAEPKDTRVASGETALLECGPPKGQPE 191 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~~--------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 191 (633)
|.+++.+|+|.|.|.+.|..+.. ...+.|.|... ++.+...|....+.+|++++|.|. ..+.+.
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~-~~~~~~ 162 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCR-ASENVD 162 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEE-ESSCCE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEE-ecCccc
Confidence 99999999999999999865543 35566777642 356666777788999999999999 466666
Q ss_pred C----eEEEEEC
Q psy15127 192 P----TLHWKKN 199 (633)
Q Consensus 192 ~----~i~W~~~ 199 (633)
+ .+.|+|+
T Consensus 163 ~~~~~~v~W~r~ 174 (253)
T 3uzq_A 163 RYGNSFMHWYQQ 174 (253)
T ss_dssp ETTEECEEEEEE
T ss_pred cCCCcEEEEEEE
Confidence 5 8999984
No 212
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.71 E-value=3.7e-17 Score=151.55 Aligned_cols=131 Identities=21% Similarity=0.234 Sum_probs=92.1
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC---CCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccCCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP---LPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENVGP 132 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p---~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v~~ 132 (633)
+.. |..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ..+++.... ...|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 445 8888999999999999998877 4789999963 221 123433322 24899999999
Q ss_pred CCCeEEEEEEEeCCce-EEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEecc
Q psy15127 133 QDEGLYICDVENLVGS-ISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFIDL 205 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~-~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~ 205 (633)
+|+|.|.|.+.|..+. ....+.|.|.. .+|.+...+....+..|+.+.|.|.+....|.+ .|.|+++|..+..
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 9999999999987664 23445666642 225554433333345789999999954334544 8999999887653
No 213
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.71 E-value=1.1e-16 Score=152.77 Aligned_cols=122 Identities=18% Similarity=0.333 Sum_probs=91.9
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i 127 (633)
+..|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ..+++.... ..+|.|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQL 83 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEE
Confidence 3556778899999999999998775 5789999942 211 023444432 247999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-----EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC-----eEEEE
Q psy15127 128 ENVGPQDEGLYICDVENLVGS-----ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP-----TLHWK 197 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~-----~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-----~i~W~ 197 (633)
.+++.+|+|.|.|.+.|..|. ....+.|.|... +.+...|....+.+|++++|.|. ..+.|.+ .+.|+
T Consensus 84 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~-~~v~~~p~~~~v~~G~~v~L~C~-~~~~~~~~~~~~~v~W~ 161 (256)
T 1nqb_A 84 SSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD-IELTQTPLSLPVSLGDQASISCR-SSQSIVHSNGNTYLEWY 161 (256)
T ss_dssp CSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC-CCEEEECSEEEECTTCCEEEEEE-ESSCCBCTTSCBCEEEE
T ss_pred CcCChhhCEEEEEEEeeccCccceeEEcCceeeeeccc-ccEEecCcEEEEecCCcEEEEeE-ecCcccccccceEEEEE
Confidence 999999999999999988652 234567777765 66666777788899999999999 4665554 89999
Q ss_pred E
Q psy15127 198 K 198 (633)
Q Consensus 198 ~ 198 (633)
|
T Consensus 162 k 162 (256)
T 1nqb_A 162 L 162 (256)
T ss_dssp E
T ss_pred E
Confidence 8
No 214
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.71 E-value=1.8e-17 Score=153.83 Aligned_cols=133 Identities=18% Similarity=0.213 Sum_probs=95.6
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC-------------CCCCeEEc---ccceEEEccCCCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM-------------PTGRAKIL---DDRSLQIENVGPQ 133 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i-------------~~~~~~~~---~~~~L~i~~v~~~ 133 (633)
|.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|++. .. ..+++... .+..|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 456677888999999999999999988889999998431 11 12233332 2348999999999
Q ss_pred CCeEEEEEEEeCCce-EEEEEEEEEEe--eccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEEEECCEEec
Q psy15127 134 DEGLYICDVENLVGS-ISLRASLTVHL--LRDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHWKKNGQFID 204 (633)
Q Consensus 134 d~G~Y~C~~~n~~g~-~s~~~~l~V~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~~~~~~~ 204 (633)
|+|.|+|.|.+..+. ....+.|.|.. .+|.+...+....+..|+.+.|.|.+....| .+.+.|+++|..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 156 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKR 156 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccC
Confidence 999999999887543 34445677732 1255555555555567889999999543343 34899999988775
No 215
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.71 E-value=5.5e-18 Score=168.25 Aligned_cols=189 Identities=16% Similarity=0.112 Sum_probs=118.2
Q ss_pred eEEEcCCCC--CCeEEEEEEe--------cC-------cCCee-eeCCCceEEEcCCeEEEEEEEecc-CCC---eEEEE
Q psy15127 49 VLGARGALS--DDQWKLIAKE--------AL-------IKPFP-ISEPSDATVLSGSVVEFVCRVGGD-PLP---TILWR 106 (633)
Q Consensus 49 ~L~i~~v~~--~G~Y~C~a~~--------v~-------~~p~~-~~~~~~~~~~~G~~~~L~C~~~~~-p~p---~i~W~ 106 (633)
.|.|.+.+. +|.|+|.|.| +. ..|.+ +..|....+.+|+.++|.|.+.+. |.+ .|+|+
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~ 152 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWS 152 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEE
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEE
Confidence 577777665 8999999998 11 13433 445555567889999999999875 556 89999
Q ss_pred eCC-ccCCCCCeE--------EcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE---eeccccccCCCceEEe
Q psy15127 107 RDD-GKMPTGRAK--------ILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVH---LLRDDFRAEPKDTRVA 174 (633)
Q Consensus 107 ~~~-~~i~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~---~~~p~~~~~~~~~~~~ 174 (633)
|++ ..+...... ....+.|.|.+++.+|+|.|+|.|.|..+.......|.+. ..+|.+.+.+......
T Consensus 153 k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~ 232 (323)
T 2wqr_A 153 RASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPG 232 (323)
T ss_dssp ETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTT
T ss_pred ECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHh
Confidence 975 444322111 1123479999999999999999999986443222222211 1224443322222222
Q ss_pred cCCcEEEEEeCCCCCCCC-eEEEEECCEEeccCCCe---eEEeccc------eeeeEEE----eeeEEEEeecCCCC
Q psy15127 175 SGETALLECGPPKGQPEP-TLHWKKNGQFIDLESSK---SLDLSRR------TLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 175 ~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~~---~~~~~~~------~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
.|+.++|.|.+....|.+ .|.|+++|..+...... .....+. .+.+... .|.|+|.|.|.+..
T Consensus 233 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 233 SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 399999999953335544 89999999987643111 0011111 1222111 37999999998764
No 216
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.71 E-value=1.9e-16 Score=151.56 Aligned_cols=127 Identities=22% Similarity=0.325 Sum_probs=91.4
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--cc---C--------------CCCCeEEcc-----cceE
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GK---M--------------PTGRAKILD-----DRSL 125 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~---i--------------~~~~~~~~~-----~~~L 125 (633)
...+..|....+.+|++++|.|.+.+. +.+.+.|+|.. .. + ..+++.... ..+|
T Consensus 9 ~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 9 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred cEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 344566777889999999999999874 47789999943 11 1 112333332 2369
Q ss_pred EEccCCCCCCeEEEEEEEeC----CceEEEEEEEEEEee-------------ccccccCCCceEEecCCcEEEEEeCCCC
Q psy15127 126 QIENVGPQDEGLYICDVENL----VGSISLRASLTVHLL-------------RDDFRAEPKDTRVASGETALLECGPPKG 188 (633)
Q Consensus 126 ~i~~v~~~d~G~Y~C~~~n~----~g~~s~~~~l~V~~~-------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 188 (633)
.|.+++.+|+|.|.|.+.|. .......+.|.|..+ ++.+...+....+.+|++++|.|. ..+
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~-~~~ 167 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS-ASS 167 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE-ESS
T ss_pred EECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE-Ecc
Confidence 99999999999999999986 222344566777754 245666677788999999999999 466
Q ss_pred CCCC-eEEEEEC
Q psy15127 189 QPEP-TLHWKKN 199 (633)
Q Consensus 189 ~p~~-~i~W~~~ 199 (633)
.+.+ .+.|+|.
T Consensus 168 ~~~~~~v~W~k~ 179 (257)
T 3gkz_A 168 SVSSSHLYWYQQ 179 (257)
T ss_dssp CCCGGGEEEEEE
T ss_pred CccceEEEEEEE
Confidence 6666 9999984
No 217
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.71 E-value=2.5e-16 Score=141.18 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=77.0
Q ss_pred CCceEEEcCCeEEEEEEEec-cCCCeEEEEeC-CccC-------------CC--CCeEE-cccceEEEccCCCCCCeEEE
Q psy15127 78 PSDATVLSGSVVEFVCRVGG-DPLPTILWRRD-DGKM-------------PT--GRAKI-LDDRSLQIENVGPQDEGLYI 139 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~-~p~p~i~W~~~-~~~i-------------~~--~~~~~-~~~~~L~i~~v~~~d~G~Y~ 139 (633)
...+.+.+|++++|.|.+.+ .+.+.|.|+|+ +..+ .. +|..+ ..+++|.|.+++.+|+|.|+
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYY 85 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEE
Confidence 34678999999999998854 34678999994 3221 11 34444 45678999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCE
Q psy15127 140 CDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 140 C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
|.+.+.. ..+..+.|.|..+.+. ......+..+.|.|.+..+ |.+.|.|++++.
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~~~------P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~ 139 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMVSK------PMIYWECSNATLTCEVLEG-TDVELKLYQGKE 139 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCCCC------CEEEEEGGGTEEEEECSSC-TTCEEEEEETTE
T ss_pred EEEEcCC-eEEEEEEEEEECCCCC------CEEEecCCCEEEEEEeCCC-CCCEEEEEECCe
Confidence 9998766 6677788888765111 1111233456666663234 555555555544
No 218
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=3.1e-17 Score=152.93 Aligned_cols=126 Identities=21% Similarity=0.323 Sum_probs=90.6
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeC--CccCC------------------CCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRD--DGKMP------------------TGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~--~~~i~------------------~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. .+++.... +.+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 456778899999999999998765 678999997 33221 23444332 3589999
Q ss_pred cCCCCCCeEEEEEEEeCCc----eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCC-CCCC-eEEEEEC
Q psy15127 129 NVGPQDEGLYICDVENLVG----SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKG-QPEP-TLHWKKN 199 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g----~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~-~i~W~~~ 199 (633)
+++.+|+|.|+|.+.+..+ .....+.|.|... +|.+...+....+.+|+.+.|.|.+ .+ .|.+ .|.|+++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~-~g~~P~p~~v~W~~~ 163 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV-KGYFPEPVTVTWNSG 163 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEE-EEEBSSCCEEEEGGG
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEc-ccccCCCeEEEEEeC
Confidence 9999999999999998763 2234567777653 1333333323345689999999995 55 8888 9999988
Q ss_pred CEE
Q psy15127 200 GQF 202 (633)
Q Consensus 200 ~~~ 202 (633)
|..
T Consensus 164 g~~ 166 (219)
T 1c1e_H 164 SLS 166 (219)
T ss_dssp TBC
T ss_pred Ccc
Confidence 764
No 219
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.70 E-value=1.6e-16 Score=141.12 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=61.8
Q ss_pred ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC-------------CCCeEEc-ccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 80 DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP-------------TGRAKIL-DDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~-------------~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+.+.+|++++|.|.+. .|.+.|.|+|++..+. .++.... .+++|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 46789999999999985 4788999999886431 1233332 4579999999999999999999887
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
.+ +..+.|.|..+
T Consensus 83 ~~--~~~~~L~V~~~ 95 (171)
T 1ccz_A 83 TD--TMKFFLYVLEM 95 (171)
T ss_dssp CS--CEEEEEEEECC
T ss_pred CC--cEEEEEEEECc
Confidence 77 67778888765
No 220
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.70 E-value=2.8e-16 Score=150.19 Aligned_cols=123 Identities=17% Similarity=0.342 Sum_probs=90.9
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i~ 128 (633)
..+....+.+|++++|.|.+.+.+ .+.+.|+|.. ..+ ..+++.... ...|.|.
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (256)
T 3umt_A 7 QQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELR 86 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred EccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEEC
Confidence 445567799999999999998765 6789999843 111 113333332 2349999
Q ss_pred cCCCCCCeEEEEEEEeC----CceEEEEEEEEEEee---------------ccccccCCCceEEecCCcEEEEEeCCCCC
Q psy15127 129 NVGPQDEGLYICDVENL----VGSISLRASLTVHLL---------------RDDFRAEPKDTRVASGETALLECGPPKGQ 189 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~----~g~~s~~~~l~V~~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 189 (633)
+++.+|+|.|.|.+.+. .+.....+.|.|... ++.+...|....+.+|++++|.|. ..+.
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~-~~~~ 165 (256)
T 3umt_A 87 SLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCR-ASQD 165 (256)
T ss_dssp SCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEE-ESSC
T ss_pred CCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEE-EecC
Confidence 99999999999999987 333455667777752 366667777788899999999999 5667
Q ss_pred CCCeEEEEEC
Q psy15127 190 PEPTLHWKKN 199 (633)
Q Consensus 190 p~~~i~W~~~ 199 (633)
|.+.+.|+|+
T Consensus 166 ~~~~v~W~k~ 175 (256)
T 3umt_A 166 IGSNLNWLQQ 175 (256)
T ss_dssp CTTCEEEEEE
T ss_pred CCcEEEEEEE
Confidence 7779999884
No 221
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=155.69 Aligned_cols=219 Identities=15% Similarity=0.133 Sum_probs=135.5
Q ss_pred ccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCC---CC
Q psy15127 364 LRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGG---GV 440 (633)
Q Consensus 364 ~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~---~~ 440 (633)
+.....|.++..|.| .|.+..+....+. +.....+++|. +.+.. ...+|.|+|.|+...+. -.
T Consensus 68 l~~~~~Y~~rV~A~n-~~~S~~s~~~~f~-----------~~~~~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~ 133 (306)
T 3s98_A 68 LNVYEEIKLRIRAEK-ENTSSWYEVDSFT-----------PFRKAQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALD 133 (306)
T ss_dssp -CTTSCEEEEEEEEC-SSCEEEEECCCBC-----------HHHHCBCCCCE-EEEEE-CSSCEEEEEECC---CCCC---
T ss_pred cCCCCcEEEEEEEEe-CCcCCCEeeeeEe-----------chhhCccCCCe-EEEEE-cCCEEEEEEECCCCCCcceecc
Confidence 456678899999999 6644322111111 01111234554 44443 44689999997654210 02
Q ss_pred cceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEe--ccccCCCCCCCCceeecCCCCCCCcchH
Q psy15127 441 APVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAEN--SHGLGIPSPVSPITRTLGLNSLVPQHLL 518 (633)
Q Consensus 441 ~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n--~~G~g~~s~~~~~~~t~~~~p~~~~~~~ 518 (633)
+.+.+|.|.|+..+....|. .....+.++|.+|.|++.|.|+|+|.| ..|.|++|... .+.|.++.|.++|..+
T Consensus 134 g~~l~Y~v~y~~~~~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~-~~~T~~~~p~~~P~~v 209 (306)
T 3s98_A 134 GLSFTYSLVIWKNSSGVEER---IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPENI 209 (306)
T ss_dssp --CCEEEEEEEETTTCCCEE---EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCE-EEECCSCCSSCCCEEE
T ss_pred CCcEEEEEEEEECCCCCeEE---EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcE-eeEecCCCcCCCCceE
Confidence 57899999999887655565 233467899999999999999999999 78999998876 4667666665555442
Q ss_pred HHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCC-cccceeeeeecc-ceeEe
Q psy15127 519 DEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPT-ASTAVRITWEKY-NMATV 596 (633)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~-~~~~~~~~w~~~-~~~~~ 596 (633)
.+... .+++.|+|++| .. + .+| .+.|...-.- ...+....|.+. +...
T Consensus 210 ---------------~~~~~-~~s~~l~W~~p--------~~-~---~~~-~v~~~~gy~~~~~~~~~~~W~~~~~c~~- 259 (306)
T 3s98_A 210 ---------------EVSVQ-NQNYVLKWDYT--------YA-N---MTF-QVQWLHAFLKRNPGNHLYKWKQIPDCEN- 259 (306)
T ss_dssp ---------------EEEEE-TTEEEEEEECS--------SS-S---CEE-EEEEEEGGGGSCC----CCCEECGGGTT-
T ss_pred ---------------EEEEe-cCEEEEEeCCC--------CC-c---EEE-EEEEehhhhhccccccccCceECCCcee-
Confidence 55444 47899999954 11 1 234 4444321000 000112358754 2222
Q ss_pred ecCCccceEEeecc-ccceeEEEEEeccccccccccCC
Q psy15127 597 MNAATTTSYTVTHL-RKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 597 ~~~~~~~~~~i~~L-~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
...+.+.+.+| .+...|.|||+|.|..|.|.+|+
T Consensus 260 ---~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~ 294 (306)
T 3s98_A 260 ---VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 294 (306)
T ss_dssp ---BSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCC
T ss_pred ---CCCccccCchhhcccCCEEEEEEEccCCCcccccc
Confidence 24677888884 45559999999999999999885
No 222
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.70 E-value=1.5e-16 Score=146.92 Aligned_cols=182 Identities=16% Similarity=0.125 Sum_probs=125.8
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEe--eeeceEEE--ecCCCCCeEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHR--ITSTSITV--SDLKPDTSYMF 484 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~i--~~L~p~~~Y~~ 484 (633)
+|++|.++.+......++.++|.++.+. +. ...|.|.|+..+. ..|...... .....+.| .+|.+++.|.|
T Consensus 3 pP~~P~nl~c~~~~~~~~~c~W~p~~~~---~~-~~~Y~l~y~~~~~-~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~ 77 (210)
T 3n06_B 3 PPGKPEIFKCRSPNKETFTCWWRPGTDG---GL-PTNYSLTYHREGE-TLMHECPDYITGGPNSCHFGKQYTSMWRTYIM 77 (210)
T ss_dssp CCCCCEEEEEEBSSSSCEEEEEECCSSS---CC-CSEEEEEEEETTC-CCCEECSCSSTTCTTEEEECGGGCCSSSCEEE
T ss_pred CCCCCeEeEEEeCCCCeEEEEECCCCCC---CC-CceEEEEEEECCC-CccccCCCCCCCCCeEEEeCCCCcccceeEEE
Confidence 3677888888888899999999998843 23 4689999997653 345432111 12234555 57999999999
Q ss_pred EEEEEeccccCCCCCCCCceeecCC-CCCCCcchHHHHHHHhCCceEEeeeeeecc----cceEEEEEEEecCCCccccc
Q psy15127 485 IVRAENSHGLGIPSPVSPITRTLGL-NSLVPQHLLDEARARLGTKVVNLRELIPTA----STAVRITWEVSWGSVPQHLL 559 (633)
Q Consensus 485 ~v~a~n~~G~g~~s~~~~~~~t~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~si~v~W~~p~~~~p~~~~ 559 (633)
+|.|.|..|.+.. ... .+.+... .|.+|.++ .+.... .+++.|+|++| ...
T Consensus 78 ~V~A~N~~G~~~s-~~~-~~~~~~~v~p~pP~~l----------------~~~~~~~~~~~~~l~l~W~~p------~~~ 133 (210)
T 3n06_B 78 MVNATNQMGSSFS-DEL-YVDVTYIVQPDPPLEL----------------AVEVKQPEDRKPYLWIKWSPP------TLI 133 (210)
T ss_dssp EEEEEETTEEEEC-CCE-EECGGGCBCCCCCEEE----------------EEEEECCSSSCCEEEEEEECC------TTC
T ss_pred EEEEEcCCCCeeC-CcE-EEchhheEecCCCceE----------------EEEEecCcCCCceEEEEcCCC------CCc
Confidence 9999999999853 222 2333333 34444333 555443 58999999954 222
Q ss_pred c-hhh-hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccc-cccCC
Q psy15127 560 D-EAR-ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVE-GARLD 633 (633)
Q Consensus 560 ~-~~~-~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~-g~~s~ 633 (633)
. .+| .+.+| .|+|+..+... |+.. .....++++|.+|+|++.|.|+|+|.|..|. |++|+
T Consensus 134 ~~~~g~~~~~Y-~v~y~~~~~~~-------~~~~------~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~ 196 (210)
T 3n06_B 134 DLKTGWFTLLY-EIRLKPEKAAE-------WEIH------FAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSP 196 (210)
T ss_dssp CCTTSSCCEEE-EEEEECTTCSS-------CEEE------EEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCC
T ss_pred cccCCeEEEEE-EEEEecCCCCC-------CEEE------eccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCC
Confidence 2 123 47999 99999876543 6421 1234688999999999999999999998887 77764
No 223
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.70 E-value=2.4e-17 Score=165.23 Aligned_cols=196 Identities=14% Similarity=0.113 Sum_probs=123.6
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEe------------cC----cCCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKE------------AL----IKPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~------------v~----~~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
.|+.+.. +++|.|.+++. +|.|+|.|.+ |. .+|.+...++...+.+|+.++|.|.+.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~ 145 (344)
T 1za6_B 66 GKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 145 (344)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEE
T ss_pred CcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEe
Confidence 4666653 24799999998 9999999977 22 345554444344457899999999998
Q ss_pred cc-CC-CeEEEEeCCccCCCC--C------eEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEE--E-------
Q psy15127 97 GD-PL-PTILWRRDDGKMPTG--R------AKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLT--V------- 157 (633)
Q Consensus 97 ~~-p~-p~i~W~~~~~~i~~~--~------~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~--V------- 157 (633)
|. |. +.|+|+|++..+... . ......+.|.|.+++.+| |.|+|.|.|..+.......+. |
T Consensus 146 g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~ 224 (344)
T 1za6_B 146 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTC 224 (344)
T ss_dssp EEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC------
T ss_pred eEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeeccccccccccc
Confidence 86 65 699999999764210 0 011112479999998888 999999999887643333222 1
Q ss_pred --------------EeeccccccCCCceEEecCCcEEEEEeCCCC-CC-CCeEEEEECCEEeccCCCeeE-Eeccceee-
Q psy15127 158 --------------HLLRDDFRAEPKDTRVASGETALLECGPPKG-QP-EPTLHWKKNGQFIDLESSKSL-DLSRRTLG- 219 (633)
Q Consensus 158 --------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p-~~~i~W~~~~~~~~~~~~~~~-~~~~~~~~- 219 (633)
...+|.+...+.......|..+.|.|.+ .| .| .+.+.|+++|..+........ ....+.+.
T Consensus 225 ~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~ 303 (344)
T 1za6_B 225 PPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLV-KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 303 (344)
T ss_dssp --------------CCBCCEEEEECCCGGGGGSSSEEEEEEE-EEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEE
T ss_pred CCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEE-eeEECCCeEEEEEECCeECCCcEecceEECCCCcEEE
Confidence 1112443332222223357779999994 55 45 469999999987753211111 11222221
Q ss_pred --eEEE-------eeeEEEEeecCCCC
Q psy15127 220 --WLRV-------RPLYWNVARPRANL 237 (633)
Q Consensus 220 --~~~~-------~g~y~C~a~~~~~~ 237 (633)
.+.+ .|.|+|.|.|....
T Consensus 304 ~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 304 YSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 1122 47899999997654
No 224
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.70 E-value=4e-17 Score=154.21 Aligned_cols=134 Identities=18% Similarity=0.257 Sum_probs=95.7
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC-------------CCCCeEEc---ccceEEEccCCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM-------------PTGRAKIL---DDRSLQIENVGP 132 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i-------------~~~~~~~~---~~~~L~i~~v~~ 132 (633)
.+.+...|..+.+.+|++++|.|.+.+.+.+.+.|+|++ ... ..+++... .+..|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 455667788899999999999999998888899999943 111 12333332 245799999999
Q ss_pred CCCeEEEEEEEeCCce-EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEEEECCEEec
Q psy15127 133 QDEGLYICDVENLVGS-ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHWKKNGQFID 204 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~~~~~~~ 204 (633)
+|+|.|+|.+.+..+. ....+.|.|... +|.+...+....+.+|+.+.|.|.+..+.| .+.+.|+++|..+.
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~ 179 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 179 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCC
Confidence 9999999999876653 333445666432 244444444444456889999999544466 68999999988765
No 225
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.70 E-value=3.1e-17 Score=153.26 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=86.9
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC--------------------CCCCeEEcc-----cceEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM--------------------PTGRAKILD-----DRSLQ 126 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i--------------------~~~~~~~~~-----~~~L~ 126 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ... ..++..... +.+|+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQ 84 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEE
Confidence 445677899999999999998765 6789999853 211 013444432 24899
Q ss_pred EccCCCCCCeEEEEEEEeCCc-----eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEE
Q psy15127 127 IENVGPQDEGLYICDVENLVG-----SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWK 197 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~ 197 (633)
|.+++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+.|+
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 164 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 164 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEe
Confidence 999999999999999998654 2223456777642 24433333223356789999999953334777 89998
Q ss_pred ECCEE
Q psy15127 198 KNGQF 202 (633)
Q Consensus 198 ~~~~~ 202 (633)
++|..
T Consensus 165 ~~g~~ 169 (222)
T 1q9r_B 165 SGSLS 169 (222)
T ss_dssp GGTBC
T ss_pred cCCeE
Confidence 87654
No 226
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.69 E-value=8.8e-17 Score=150.53 Aligned_cols=128 Identities=20% Similarity=0.274 Sum_probs=85.1
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------C------------CCCeEEcc-----cceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------P------------TGRAKILD-----DRSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------~------------~~~~~~~~-----~~~L~i 127 (633)
+.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . .+++.... +.+|.|
T Consensus 4 l~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (227)
T 1mju_H 4 LQQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQL 83 (227)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEE
Confidence 3557788899999999999998766 6789999964 211 0 23444432 358999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEE
Q psy15127 128 ENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQF 202 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~ 202 (633)
.+++.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.++|.|.+....|.+ .+.|++++..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 163 (227)
T 1mju_H 84 SSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLS 163 (227)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCc
Confidence 999999999999999986432 223457777652 23333322223466899999999954335766 9999988764
No 227
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.69 E-value=4.1e-16 Score=149.08 Aligned_cols=129 Identities=14% Similarity=0.280 Sum_probs=94.8
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC------------------CCCCeEEcc-----c
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM------------------PTGRAKILD-----D 122 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i------------------~~~~~~~~~-----~ 122 (633)
.+|.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|.. ..+ ..+++.... .
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 35677888899999999999999999873 67789999843 111 013444432 1
Q ss_pred ceEEEccCCCCCCeEEEEEEEeC------------CceEEEEEEEEEEee--------------ccccccCCCceEEecC
Q psy15127 123 RSLQIENVGPQDEGLYICDVENL------------VGSISLRASLTVHLL--------------RDDFRAEPKDTRVASG 176 (633)
Q Consensus 123 ~~L~i~~v~~~d~G~Y~C~~~n~------------~g~~s~~~~l~V~~~--------------~p~~~~~~~~~~~~~g 176 (633)
.+|+|.+++.+|+|.|.|.+.+. .+.....+.|.|... ++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 36999999999999999999986 333445567777764 2455666777888899
Q ss_pred CcEEEEEeCCCCCCC-CeEEEEEC
Q psy15127 177 ETALLECGPPKGQPE-PTLHWKKN 199 (633)
Q Consensus 177 ~~~~l~C~~~~~~p~-~~i~W~~~ 199 (633)
++++|.|.+ .+.+. +.+.|+|.
T Consensus 165 ~~v~L~C~~-~~~~~~~~v~W~k~ 187 (256)
T 3juy_B 165 ERATFSCRS-SHSIRSRRVAWYQH 187 (256)
T ss_dssp SCEEEEEEE-SSCCTTCCEEEEEE
T ss_pred CCEEEEEEE-CCCcCCeeEEEEEE
Confidence 999999994 55555 89999873
No 228
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=2e-16 Score=150.17 Aligned_cols=161 Identities=17% Similarity=0.169 Sum_probs=110.7
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeE-----EcccceEEEccCCCCCCeEEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAK-----ILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
..+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... ...+..|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 45788887776 67999999999999974 56789999999865321100 1234689999999999999999998
Q ss_pred eCC-----ceEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEECCEEeccCCCeeEE---e
Q psy15127 144 NLV-----GSISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKSLD---L 213 (633)
Q Consensus 144 n~~-----g~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~---~ 213 (633)
+.. ...+..+.|.|... +|.+...+. ..+.+|++++|.|. +.+. .+.|.|+|+|..+......... .
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~-~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~ 159 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCS-SRSS-YDMYHLSREGEAHERRFSAGPKVNGT 159 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEE-CSSC-CSEEEEEETTSSCEECCBCBCCSSSC
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEe-CCCC-CcEEEEEECCcccCcccccccccCCc
Confidence 642 12466778888763 245554544 46789999999999 4554 4699999999766532211000 0
Q ss_pred ccceeeeEE--EeeeEEEEeecC
Q psy15127 214 SRRTLGWLR--VRPLYWNVARPR 234 (633)
Q Consensus 214 ~~~~~~~~~--~~g~y~C~a~~~ 234 (633)
....+.+.. ..|.|+|.|.+.
T Consensus 160 ~~~~l~I~~v~D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 160 FQADFPLGPATHGGTYRCFGSFR 182 (257)
T ss_dssp CBEEEEEEECCSCEEEEEEEECS
T ss_pred eeEEEEecccccCEEEEEEEEcC
Confidence 112222222 569999999875
No 229
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.69 E-value=4.1e-16 Score=141.50 Aligned_cols=126 Identities=22% Similarity=0.278 Sum_probs=101.4
Q ss_pred ecccCCCCCceEEeeCc---eEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeCCCceEEEcCCeEEEEE
Q psy15127 32 SGDPGFDSRRSRSIFGS---VLGARGALS--DDQWKLIAKE-------------ALIKPFPISEPSDATVLSGSVVEFVC 93 (633)
Q Consensus 32 ~~~~~~~~~~~~~~~~~---~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~~~~~~~~~G~~~~L~C 93 (633)
+|.+.....++.+..++ .|.|.+++. +|.|+|.+.+ +..+|.+...+....+.+|+.+.|.|
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C 118 (189)
T 2v44_A 39 QGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVC 118 (189)
T ss_dssp TSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECC
T ss_pred CCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEE
Confidence 35555566677776655 899999998 9999999998 45567777777788899999999999
Q ss_pred EEeccCCCeEEEEeCCccCC---CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy15127 94 RVGGDPLPTILWRRDDGKMP---TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTV 157 (633)
Q Consensus 94 ~~~~~p~p~i~W~~~~~~i~---~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V 157 (633)
.+.+.|.|.++|+|++..+. ..+.....++.|.|.+++.+|+|.|+|.|.|..+.......+.|
T Consensus 119 ~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 119 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999998774 45666667789999999999999999999999876544444443
No 230
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.69 E-value=4.6e-17 Score=148.82 Aligned_cols=104 Identities=18% Similarity=0.096 Sum_probs=83.7
Q ss_pred ceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC
Q psy15127 48 SVLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP 113 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~ 113 (633)
..|.|.+++. +|.|+|.|.| |..||.+...+....+.+|+.++|.|.+.|.|.|.|+|++++..+.
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~ 148 (203)
T 4fa8_A 69 FFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEP 148 (203)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----
T ss_pred EEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeec
Confidence 4699999999 9999999998 5667777777888888999999999999999999999998776442
Q ss_pred -----CCCeEEcccceEE---EccCCCCCCeEEEEEEEeCCceEEE
Q psy15127 114 -----TGRAKILDDRSLQ---IENVGPQDEGLYICDVENLVGSISL 151 (633)
Q Consensus 114 -----~~~~~~~~~~~L~---i~~v~~~d~G~Y~C~~~n~~g~~s~ 151 (633)
..+.....+++|. |.+++.+|+|.|+|.|.|..|.+..
T Consensus 149 ~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 149 APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp -------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 2345555666554 4689999999999999999998664
No 231
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.69 E-value=6e-17 Score=150.57 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=88.0
Q ss_pred CCCceEEEcCCeEEEEEEE-eccC-CCeEEEEeCCc--cC-------------CCCCeEEcc---cceEEEccCCCCCCe
Q psy15127 77 EPSDATVLSGSVVEFVCRV-GGDP-LPTILWRRDDG--KM-------------PTGRAKILD---DRSLQIENVGPQDEG 136 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~-~~~p-~p~i~W~~~~~--~i-------------~~~~~~~~~---~~~L~i~~v~~~d~G 136 (633)
+|..+.+.+|++++|.|.+ .+.+ .+.|.|+|++. .+ ..+++.... ...|.|.+++.+|+|
T Consensus 6 qp~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 6 QPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 3778899999999999995 4442 57899999542 21 022433332 348999999999999
Q ss_pred EEEEEEEeCCc--eEEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEec
Q psy15127 137 LYICDVENLVG--SISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFID 204 (633)
Q Consensus 137 ~Y~C~~~n~~g--~~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~ 204 (633)
.|+|.|.|..+ .....+.|.|... +|.+...+.......|+.+.|.|.+..+.|.+ .|.|+++|..+.
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 158 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 158 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecC
Confidence 99999999876 2333456777532 24444433222234688999999954335664 899999988664
No 232
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.68 E-value=1.6e-16 Score=153.70 Aligned_cols=128 Identities=19% Similarity=0.309 Sum_probs=88.9
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCcc-----C----------CCCCeEEcc---cceEEEccCCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGK-----M----------PTGRAKILD---DRSLQIENVGP 132 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~-----i----------~~~~~~~~~---~~~L~i~~v~~ 132 (633)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++.. + ..+++.... ..+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 35677778888999999999999999888889999996421 1 022433332 23899999999
Q ss_pred CCCeEEEEEEEeCCce-EEEEEEEEEEeec------------cc-cccCCCceEEecCCcEEEEEeCCCCCC--CCeEEE
Q psy15127 133 QDEGLYICDVENLVGS-ISLRASLTVHLLR------------DD-FRAEPKDTRVASGETALLECGPPKGQP--EPTLHW 196 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~------------p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~i~W 196 (633)
+|+|.|.|.+.|..+. ....+.|.|...+ |. ....|....+.+|++++|.|.+ .+.+ .+.+.|
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W 170 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAA-SGFTISDYWIHW 170 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEE-ESSCGGGSEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEe-cCccCCCCEEEE
Confidence 9999999999987543 3334566666541 12 2233455677788888888884 4444 478888
Q ss_pred EEC
Q psy15127 197 KKN 199 (633)
Q Consensus 197 ~~~ 199 (633)
+|+
T Consensus 171 ~k~ 173 (276)
T 3auv_A 171 VRQ 173 (276)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 233
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.68 E-value=4.2e-17 Score=150.88 Aligned_cols=126 Identities=19% Similarity=0.263 Sum_probs=87.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC-----------------CCCCeEEcc-----cceEEEcc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM-----------------PTGRAKILD-----DRSLQIEN 129 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~-----~~~L~i~~ 129 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ... ..++..... +.+|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 84 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNS 84 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECC
Confidence 346778899999999999998765 4789999853 211 123444432 23899999
Q ss_pred CCCCCCeEEEEEEEeCCceEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEE
Q psy15127 130 VGPQDEGLYICDVENLVGSISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQF 202 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~ 202 (633)
++.+|+|.|.|.+.+.. .....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+.|++++..
T Consensus 85 v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp CCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 99999999999998863 2223356666631 24443333333467899999999954334877 9999988764
No 234
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.68 E-value=2.6e-16 Score=143.15 Aligned_cols=139 Identities=24% Similarity=0.344 Sum_probs=110.5
Q ss_pred CCCccccccceeeEEEEecccCCC-CCceEEeeC-ceEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeC
Q psy15127 15 SPRAEIEPATRTNRVSISGDPGFD-SRRSRSIFG-SVLGARGALS--DDQWKLIAKE-------------ALIKPFPISE 77 (633)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~ 77 (633)
.|.+.|+|+ .+|.+... ..++.+..+ ++|.|.+++. +|.|+|.+.+ +..+|.+...
T Consensus 34 ~p~~~i~W~-------~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~ 106 (192)
T 2iep_A 34 YPQPEISWT-------RNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRP 106 (192)
T ss_dssp ESCCEEEEE-------ETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEEC
T ss_pred CCCCeEEEE-------ECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccC
Confidence 455566643 33433332 456665544 4699999998 9999999987 4567788888
Q ss_pred CCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcccceEEEccCCCCCCeEEEEEEEeCCceE-EEEEEE
Q psy15127 78 PSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDDRSLQIENVGPQDEGLYICDVENLVGSI-SLRASL 155 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l 155 (633)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..+ +.....++.|.|.+++.+|+|.|+|.|.|..|.. +..+.|
T Consensus 107 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l 186 (192)
T 2iep_A 107 PINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKL 186 (192)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred CcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEE
Confidence 88889999999999999999999999999999988654 4455567799999999999999999999999986 567888
Q ss_pred EEEee
Q psy15127 156 TVHLL 160 (633)
Q Consensus 156 ~V~~~ 160 (633)
.|..+
T Consensus 187 ~V~~p 191 (192)
T 2iep_A 187 EVEVF 191 (192)
T ss_dssp EEEC-
T ss_pred EEEeC
Confidence 88876
No 235
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=2e-16 Score=149.76 Aligned_cols=126 Identities=20% Similarity=0.276 Sum_probs=92.8
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccC----CCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDP----LPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENV 130 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p----~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v 130 (633)
.+...|..+.+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ..+++.... ..+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 456678888999999999999999887 7789999963 211 012333322 237999999
Q ss_pred CCCCCeEEEEEEEeCCce-EEEEEEEEEEeec-----cccccCCCceEEecCCcEEEEEeCCCCCC--CCeEEEEEC
Q psy15127 131 GPQDEGLYICDVENLVGS-ISLRASLTVHLLR-----DDFRAEPKDTRVASGETALLECGPPKGQP--EPTLHWKKN 199 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~i~W~~~ 199 (633)
+.+|+|.|+|.|.|..+. ....+.|.|...+ +.+...+....+.+|+.++|.|. ..+.| .+.+.|+|+
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~-~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCT-ASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEE-EESSCGGGSCEEEEEE
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEE-EcCccCCCCEEEEEEE
Confidence 999999999999987654 4455677887642 22334566677889999999999 45555 468999885
No 236
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.68 E-value=1e-15 Score=139.05 Aligned_cols=126 Identities=21% Similarity=0.312 Sum_probs=101.5
Q ss_pred EecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe-----------cCcCCeeeeCCCceEEEcCCeEEEEEEEec
Q psy15127 31 ISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE-----------ALIKPFPISEPSDATVLSGSVVEFVCRVGG 97 (633)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~ 97 (633)
.+|.+...+.+.. .++.|.|.+++. +|.|+|.|.| +..+|.+...+....+.+|+.+.|.|.+.|
T Consensus 41 ~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g 118 (190)
T 2wv3_A 41 KNGVELTATRKNA--SNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVG 118 (190)
T ss_dssp ETTEECTTCCBCC--SEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEEC
T ss_pred ECCEECcccceEe--ccEEEEEecCCcccCEEEEEEEEeCCcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCc
Confidence 3444444433321 457899999999 9999999987 567888888888889999999999999999
Q ss_pred cCCCeEEEEe--CCccCC----CCCeEEccc---ceEEEccCC-CCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 98 DPLPTILWRR--DDGKMP----TGRAKILDD---RSLQIENVG-PQDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 98 ~p~p~i~W~~--~~~~i~----~~~~~~~~~---~~L~i~~v~-~~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
.|.|.+.|++ ++..+. .++.....+ +.|.|.+++ .+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 119 ~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 119 YPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999999 676552 334444332 379999999 799999999999999999888888876
No 237
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=1.9e-17 Score=153.48 Aligned_cols=128 Identities=24% Similarity=0.304 Sum_probs=88.7
Q ss_pred CCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCC-------------CCCeEEcc---cceEEEccCCCCCCeEEE
Q psy15127 78 PSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMP-------------TGRAKILD---DRSLQIENVGPQDEGLYI 139 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~-------------~~~~~~~~---~~~L~i~~v~~~d~G~Y~ 139 (633)
|..+.+.+|++++|.|.+.+.|.+.|.|+|++ ..+. .+++.... ...|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 78889999999999999988888889999853 2220 23433332 248999999999999999
Q ss_pred EEEEeC-Cce--EEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEecc
Q psy15127 140 CDVENL-VGS--ISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDL 205 (633)
Q Consensus 140 C~~~n~-~g~--~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~ 205 (633)
|.|.|. .+. ......|.|.. .+|.+...+....+.+|+.+.|.|.+....|. +.|.|+++|..+..
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 158 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIND 158 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECS
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCC
Confidence 999973 222 23335566642 22455444443445578899999985333354 68888888877653
No 238
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=8.9e-16 Score=148.91 Aligned_cols=123 Identities=20% Similarity=0.372 Sum_probs=86.7
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCCc--cC------------------CCCCeEEcc-----cceEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDDG--KM------------------PTGRAKILD-----DRSLQ 126 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~~--~i------------------~~~~~~~~~-----~~~L~ 126 (633)
+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|++. .+ ..+++.... ..+|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34567788999999999999998774 57899999642 11 023444332 25799
Q ss_pred EccCCCCCCeEEEEEEEeCCc---e--EEEEEEEEEEeec--------------cccccCCCceEEecCCcEEEEEeCCC
Q psy15127 127 IENVGPQDEGLYICDVENLVG---S--ISLRASLTVHLLR--------------DDFRAEPKDTRVASGETALLECGPPK 187 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g---~--~s~~~~l~V~~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~ 187 (633)
|.+++.+|+|.|.|.+.|..| . ....+.|.|...+ +.+...|....+.+|++++|.|. ..
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~-~~ 187 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCS-AS 187 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEE-ES
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEE-ec
Confidence 999999999999999998865 1 2234567777641 23344555666778888888888 45
Q ss_pred CCCCCeEEEEE
Q psy15127 188 GQPEPTLHWKK 198 (633)
Q Consensus 188 ~~p~~~i~W~~ 198 (633)
+.+ +.+.|+|
T Consensus 188 ~~~-~~v~W~k 197 (282)
T 1qok_A 188 SSV-SYMHWFQ 197 (282)
T ss_dssp SCC-SCCEEEE
T ss_pred CCC-ceEEEEE
Confidence 556 7788877
No 239
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=141.87 Aligned_cols=148 Identities=22% Similarity=0.322 Sum_probs=109.5
Q ss_pred ccCCCCCCCCCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe--------------cC
Q psy15127 6 DTNHAHPMSSPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE--------------AL 69 (633)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~--------------v~ 69 (633)
.+.|.. .+.|.+.|.|+...... ......++.+..+++|.|.+++. +|.|+|.+.+ +.
T Consensus 21 ~l~C~~-~~~p~~~v~W~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~ 94 (189)
T 2v5t_A 21 EVVCRV-SSSPAPAVSWLYHNEEV-----TTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN 94 (189)
T ss_dssp EECCEE-ECSSCCEEEEEC----------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEEEE-cCCCCCEEEEEECCccc-----eeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEec
Confidence 344433 34466677755432211 11245677777788999999998 9999999987 33
Q ss_pred cCCeeeeCCC--ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEc--ccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPS--DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKIL--DDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~--~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|+++|..+........ .+..|.|.+++.+|+|.|+|.|.|.
T Consensus 95 ~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 174 (189)
T 2v5t_A 95 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 174 (189)
T ss_dssp EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeC
Confidence 4555554444 34567899999999999999999999999998876543322 3568999999999999999999999
Q ss_pred CceEEEEEEEEEEe
Q psy15127 146 VGSISLRASLTVHL 159 (633)
Q Consensus 146 ~g~~s~~~~l~V~~ 159 (633)
.|..+..+.|.|..
T Consensus 175 ~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 175 AGEDEKQAFLQVFV 188 (189)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCceeEEEEEEEEe
Confidence 99988888888763
No 240
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=151.01 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=84.7
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCC------------------CCCeEEc-----ccceE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMP------------------TGRAKIL-----DDRSL 125 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~------------------~~~~~~~-----~~~~L 125 (633)
+|.+...|..+.+.+|++++|.|.+.+.+.+.+.|+|.. .... .+++... .+.+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 466777888999999999999999998888899999932 1110 0011111 13469
Q ss_pred EEccCCCCCCeEEEEEEEeCCc---eEEEEEEEEEEee----------------ccccccCCCceEEecCCcEEEEEeCC
Q psy15127 126 QIENVGPQDEGLYICDVENLVG---SISLRASLTVHLL----------------RDDFRAEPKDTRVASGETALLECGPP 186 (633)
Q Consensus 126 ~i~~v~~~d~G~Y~C~~~n~~g---~~s~~~~l~V~~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 186 (633)
.|.+++.+|+|.|.|.+.+..+ .....+.|.|... .+.+...|....+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999998765 3445567777764 24556677778899999999999843
Q ss_pred CCCCCCeEEEEEC
Q psy15127 187 KGQPEPTLHWKKN 199 (633)
Q Consensus 187 ~~~p~~~i~W~~~ 199 (633)
...+.+.+.|+|.
T Consensus 162 ~~~~~~~v~W~k~ 174 (259)
T 3omz_A 162 TSWWSYYIFWYKR 174 (259)
T ss_dssp CCCSSCEEEEEEE
T ss_pred CccCCceEEEeee
Confidence 3347889999984
No 241
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.67 E-value=7.1e-17 Score=153.99 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=94.4
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccC-----CCeEEEEeCCc--cC-------------CCCCeEEcc---cceEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDP-----LPTILWRRDDG--KM-------------PTGRAKILD---DRSLQI 127 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-----~p~i~W~~~~~--~i-------------~~~~~~~~~---~~~L~i 127 (633)
.+.+...|..+.+.+|++++|.|.+.+.+ .+.|.|+|++. .+ ..+++.... +.+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 45666778888999999999999998877 58899999642 11 023433332 238999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEe
Q psy15127 128 ENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFI 203 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 203 (633)
.+++.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.++|.|.+....|.+ .|.|+++|..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 193 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 193 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeec
Confidence 999999999999999887553 223356777642 25544433333344789999999954335554 89999998866
Q ss_pred c
Q psy15127 204 D 204 (633)
Q Consensus 204 ~ 204 (633)
.
T Consensus 194 ~ 194 (252)
T 3bkj_L 194 Q 194 (252)
T ss_dssp C
T ss_pred C
Confidence 4
No 242
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=3.8e-16 Score=126.17 Aligned_cols=92 Identities=25% Similarity=0.459 Sum_probs=80.8
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE-cc---cceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI-LD---DRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~-~~---~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.|+..|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..|..+.+.. .. ..+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 357899999999999999999999999999999999999999997654333 22 24799999999999999999999
Q ss_pred CCceEEEEEEEEEEee
Q psy15127 145 LVGSISLRASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~ 160 (633)
..|..+..+.|.|..+
T Consensus 91 ~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TTEEEEEEEEEEEEC-
T ss_pred CCCEEEEEEEEEEEcC
Confidence 9999999999999876
No 243
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.67 E-value=4.2e-16 Score=148.18 Aligned_cols=126 Identities=18% Similarity=0.239 Sum_probs=87.4
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccC-----CCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEcc
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDP-----LPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIEN 129 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p-----~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~ 129 (633)
.+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... ...|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 456678888999999999999998877 6889999953 211 023433322 24799999
Q ss_pred CCCCCCeEEEEEEEeCCce-EEEEEEEEEEeec------------cccccCCCceEEecCCcEEEEEeCCCCCC--CCeE
Q psy15127 130 VGPQDEGLYICDVENLVGS-ISLRASLTVHLLR------------DDFRAEPKDTRVASGETALLECGPPKGQP--EPTL 194 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~i 194 (633)
++.+|+|.|.|.+.|..+. ....+.|.|..++ +.....+....+.+|++++|.|.+ .+.+ .+.+
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v 161 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKA-TNYAFTDYSM 161 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSCE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEE-cCcccCCcEE
Confidence 9999999999999987553 3334677776641 112233334458889999999984 4443 5688
Q ss_pred EEEEC
Q psy15127 195 HWKKN 199 (633)
Q Consensus 195 ~W~~~ 199 (633)
.|+|+
T Consensus 162 ~W~k~ 166 (247)
T 1svz_A 162 HWVKQ 166 (247)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 89875
No 244
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.67 E-value=1.3e-17 Score=155.79 Aligned_cols=123 Identities=23% Similarity=0.390 Sum_probs=90.6
Q ss_pred CCCceEEEcCCeEEEEEEEec-cCCC----eEEEEeCCccCC--------------CCCeEEcc--------cceEEEcc
Q psy15127 77 EPSDATVLSGSVVEFVCRVGG-DPLP----TILWRRDDGKMP--------------TGRAKILD--------DRSLQIEN 129 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~~~-~p~p----~i~W~~~~~~i~--------------~~~~~~~~--------~~~L~i~~ 129 (633)
.|..+.+.+|++++|.|.+.+ .+.+ .+.|+|++.... .++..+.. +.+|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 456778899999999999853 3433 499999875321 23333332 56899999
Q ss_pred CCCCCCeEEEEEEEeCC-ceEEEEEEEEEEeeccccccCCCceEEecCCcE-EEEEeCCCCCCCCeEEEEECCE
Q psy15127 130 VGPQDEGLYICDVENLV-GSISLRASLTVHLLRDDFRAEPKDTRVASGETA-LLECGPPKGQPEPTLHWKKNGQ 201 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~-g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~~~~p~~~i~W~~~~~ 201 (633)
++.+|+|.|+|.+.+.. +..+..+.|.|..+ |.+...+.... .+|+.+ .|.|.+..+.|.+.+.|++++.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~-P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAK-PQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCC-CEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEEC-CCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 99999999999999876 66788888888886 66554333322 678888 4999965688888999987643
No 245
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.67 E-value=1.3e-16 Score=148.66 Aligned_cols=126 Identities=25% Similarity=0.361 Sum_probs=88.6
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--cc---C----C-------------CCCeEEcc-----cceEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GK---M----P-------------TGRAKILD-----DRSLQ 126 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~---i----~-------------~~~~~~~~-----~~~L~ 126 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ .. + . .++..... +..|.
T Consensus 5 ~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (220)
T 1pz5_B 5 EESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQ 84 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred eccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEE
Confidence 446778899999999999998765 6789999953 11 1 0 23444432 23899
Q ss_pred EccCCCCCCeEEEEEEEeCCce---EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 127 IENVGPQDEGLYICDVENLVGS---ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g~---~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
|.+++.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+.|+++
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 9999999999999999987532 123467777632 24443333333457899999999954334888 9999987
Q ss_pred CE
Q psy15127 200 GQ 201 (633)
Q Consensus 200 ~~ 201 (633)
+.
T Consensus 165 ~~ 166 (220)
T 1pz5_B 165 AL 166 (220)
T ss_dssp TC
T ss_pred Cc
Confidence 65
No 246
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=4.8e-17 Score=153.31 Aligned_cols=132 Identities=20% Similarity=0.204 Sum_probs=89.9
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccC-CC-eEEEEeCC--ccC-------------CCCCeEEc---ccceEEEccCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDP-LP-TILWRRDD--GKM-------------PTGRAKIL---DDRSLQIENVG 131 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p-~p-~i~W~~~~--~~i-------------~~~~~~~~---~~~~L~i~~v~ 131 (633)
+.+.. |..+.+.+|++++|.|.+.+.+ .+ .+.|+|++ ..+ ..+++... .+..|.|.+++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 99 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR 99 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC
Confidence 33444 7788899999999999998754 34 69999963 221 01233332 23489999999
Q ss_pred CCCCeEEEEEEEeCCc---eEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEec
Q psy15127 132 PQDEGLYICDVENLVG---SISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFID 204 (633)
Q Consensus 132 ~~d~G~Y~C~~~n~~g---~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~ 204 (633)
.+|+|.|+|.|.+..+ .....+.|.|.. .+|.+...+.......|+.+.|.|.+....|. +.|.|+++|..+.
T Consensus 100 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 179 (234)
T 2j6e_L 100 SEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVK 179 (234)
T ss_dssp STTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECC
T ss_pred HHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECC
Confidence 9999999999999877 233345666642 12444443333334468899999995433454 4899999988764
No 247
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.67 E-value=8.9e-16 Score=142.20 Aligned_cols=144 Identities=15% Similarity=0.039 Sum_probs=103.3
Q ss_pred CCCccccccceeeEEEEecccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe-------------cCc--CCeeeeC
Q psy15127 15 SPRAEIEPATRTNRVSISGDPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE-------------ALI--KPFPISE 77 (633)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-------------v~~--~p~~~~~ 77 (633)
.|.+.|+|+++.. +|.+..++.++....++.|.|.+++. +|.|+|.|.| +.. +|.+...
T Consensus 35 ~p~~~v~w~~~~~----~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~ 110 (213)
T 2x1w_L 35 ISNLNVSLCARYP----EKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLS 110 (213)
T ss_dssp STTCCEEEEEETT----TEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEE
T ss_pred CCCcEEEEEhhcC----CCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEc
Confidence 3667888655300 13334445566666778899999998 9999999987 211 3444444
Q ss_pred CC-ceEEEcCCeEEEEEEEeccC--CCeEEEEeCCccCCCCCe---E---------EcccceEEEccCCCCCCeEEEEEE
Q psy15127 78 PS-DATVLSGSVVEFVCRVGGDP--LPTILWRRDDGKMPTGRA---K---------ILDDRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 78 ~~-~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~~~i~~~~~---~---------~~~~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
+. .+.+.+|++++|.|.+.+.| .+.++|++++..+..... . ....+.|.|.+++.+|+|.|+|.|
T Consensus 111 ~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 190 (213)
T 2x1w_L 111 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAA 190 (213)
T ss_dssp SCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEE
Confidence 44 44899999999999999854 347999999887533211 0 111346999999999999999999
Q ss_pred EeCCceEEEEEEEEEEeeccc
Q psy15127 143 ENLVGSISLRASLTVHLLRDD 163 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~~p~ 163 (633)
.|..|..+..+.|.|... |.
T Consensus 191 ~N~~g~~~~~~~l~V~~~-p~ 210 (213)
T 2x1w_L 191 SSGLMTKKNSTFVRVHED-PI 210 (213)
T ss_dssp ECSSCEEEEEEEEEEEC----
T ss_pred ecCCCcEEEEEEEEEecc-cc
Confidence 999999999999999886 54
No 248
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.67 E-value=7.6e-16 Score=140.52 Aligned_cols=108 Identities=24% Similarity=0.397 Sum_probs=94.4
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCC-eEEEEeCCc
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLP-TILWRRDDG 110 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p-~i~W~~~~~ 110 (633)
+++|.|.+++. +|.|+|.|.+ +..+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|+|++.
T Consensus 67 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~ 146 (195)
T 2c5d_C 67 VSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAV 146 (195)
T ss_dssp EEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSC
T ss_pred ccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCE
Confidence 36899999998 9999999988 5677888888888999999999999999999999 999999999
Q ss_pred cCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEE-EEEEEEE
Q psy15127 111 KMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSIS-LRASLTV 157 (633)
Q Consensus 111 ~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s-~~~~l~V 157 (633)
.+...... ..++.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 147 ~~~~~~~~-~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 147 PLATAPGH-GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp BSSSSTTS-SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eccCCCCc-CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 88654322 456789999997 89999999999999874 7888888
No 249
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.66 E-value=3.6e-16 Score=149.47 Aligned_cols=124 Identities=19% Similarity=0.273 Sum_probs=80.8
Q ss_pred eeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccCCCCC
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENVGPQD 134 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v~~~d 134 (633)
+..|..+.+.+|++++|.|.+.+. +.+.+.|+|+. ... ..+++.... ...|.|.+++.+|
T Consensus 6 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (256)
T 3ux9_B 6 LTQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSED 85 (256)
T ss_dssp CBCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred EecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhh
Confidence 345667889999999999999876 77889999953 211 112333322 2379999999999
Q ss_pred CeEEEEEEEeCCce---EEEEEEEEEEeeccc-------------------cccCCCceEEecCCcEEEEEeCCCCCC--
Q psy15127 135 EGLYICDVENLVGS---ISLRASLTVHLLRDD-------------------FRAEPKDTRVASGETALLECGPPKGQP-- 190 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~---~s~~~~l~V~~~~p~-------------------~~~~~~~~~~~~g~~~~l~C~~~~~~p-- 190 (633)
+|.|.|.+.+..+. ....+.|.|..++.. ....+....+.+|++++|.|.+ .+.+
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~ 164 (256)
T 3ux9_B 86 EADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAA-SGFTFS 164 (256)
T ss_dssp CEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEE-ESSCGG
T ss_pred CEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEE-eCCccc
Confidence 99999999986542 334567777765210 1122223346677777777773 4444
Q ss_pred CCeEEEEEC
Q psy15127 191 EPTLHWKKN 199 (633)
Q Consensus 191 ~~~i~W~~~ 199 (633)
.+.+.|+|+
T Consensus 165 ~~~v~W~r~ 173 (256)
T 3ux9_B 165 SYAMSWVRQ 173 (256)
T ss_dssp GSEEEEEEE
T ss_pred ccEEEEEEE
Confidence 567777764
No 250
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.66 E-value=1.2e-15 Score=141.33 Aligned_cols=140 Identities=26% Similarity=0.391 Sum_probs=107.7
Q ss_pred CCCCccccccceeeEEEEecccCC-CCCceEEee--C--ceEEEcCCCC---CCeEEEEEEe-------------cCc--
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGF-DSRRSRSIF--G--SVLGARGALS---DDQWKLIAKE-------------ALI-- 70 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~--~--~~L~i~~v~~---~G~Y~C~a~~-------------v~~-- 70 (633)
+.|.+.|+|+ .+|.+.. ...++.+.. + .+|.|.+++. +|.|+|.|.| +..
T Consensus 32 g~p~~~v~W~-------~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~ 104 (212)
T 2yd1_A 32 GDPPPSIVWR-------KNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGD 104 (212)
T ss_dssp CSSCCEEEEE-------ETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTT
T ss_pred cCCCCeEEEE-------ECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEeccc
Confidence 3455566633 3444443 344555432 3 4799999863 9999999988 222
Q ss_pred -----CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC-CCeEEcccceEEEccCCCCCCeEEEEEEEe
Q psy15127 71 -----KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT-GRAKILDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 71 -----~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .......++.|.|.+++.+|+|.|+|.|.|
T Consensus 105 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 184 (212)
T 2yd1_A 105 KTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAEN 184 (212)
T ss_dssp CSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeec
Confidence 27788888888899999999999999999999999999998864 334455677999999999999999999999
Q ss_pred CCceEEEE-EEEEEEee
Q psy15127 145 LVGSISLR-ASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~-~~l~V~~~ 160 (633)
..|..... +.|.|...
T Consensus 185 ~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 185 SMGTEHSKATNLYVKVR 201 (212)
T ss_dssp TTEEEECCCEEEEEEC-
T ss_pred CCCceeEEEEEEEEEec
Confidence 99987654 88888875
No 251
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=6.3e-16 Score=146.32 Aligned_cols=126 Identities=18% Similarity=0.200 Sum_probs=86.0
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEEccCCCCC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM-------------PTGRAKILD---DRSLQIENVGPQD 134 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i~~v~~~d 134 (633)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|+|+. ... ..+++.... ..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4667788899999999999999998888899999953 111 123433322 3479999999999
Q ss_pred CeEEEEEEEeCCce-EEEEEEEEEEeecc------------ccccCCCceEEecCCcEEEEEeCCCCCC--CCeEEEEEC
Q psy15127 135 EGLYICDVENLVGS-ISLRASLTVHLLRD------------DFRAEPKDTRVASGETALLECGPPKGQP--EPTLHWKKN 199 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~-~s~~~~l~V~~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~i~W~~~ 199 (633)
+|.|.|.+.|..+. ....+.|.|..++. .....+....+.+|++++|.|.+ .+.| .+.+.|+|+
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSV-TGDSITSDYXSXIRK 161 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEE-ESSCGGGSCEEEEEE
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEE-EccccCCcceeeEee
Confidence 99999999987543 23445677776521 12222233457778888888873 4444 467888774
No 252
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.66 E-value=6.9e-16 Score=140.26 Aligned_cols=145 Identities=20% Similarity=0.227 Sum_probs=108.7
Q ss_pred cCCCCCCCCCCccccccceeeEEEEecccCC-CCCceEEe----eCceEEEcCCCC--CCeEEEEEEe------------
Q psy15127 7 TNHAHPMSSPRAEIEPATRTNRVSISGDPGF-DSRRSRSI----FGSVLGARGALS--DDQWKLIAKE------------ 67 (633)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~L~i~~v~~--~G~Y~C~a~~------------ 67 (633)
+.|......|.+.|+|+..+ |.+.. ...++.+. .++.|.|.+++. +|.|+|.+.+
T Consensus 22 l~C~~~~~~~~~~v~W~~~~------g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l 95 (191)
T 1epf_A 22 FLCQVAGDAKDKDISWFSPN------GEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNV 95 (191)
T ss_dssp EEEEECCCSCCCEEEEECTT------SCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEE
T ss_pred EEEECCCCCCCceEEEEeCC------CccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEE
Confidence 33443333346677755422 22222 33455543 246899999998 9999999988
Q ss_pred -cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC---CCCeEEcccceEEEccCCCCCCeEEEEEEE
Q psy15127 68 -ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP---TGRAKILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 68 -v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~---~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+. ..+.....++.|.|.+++.+|+|.|+|.|.
T Consensus 96 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 175 (191)
T 1epf_A 96 KIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGR 175 (191)
T ss_dssp EEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEE
T ss_pred EeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEE
Confidence 4567888888888899999999999999999999999999998874 335566667799999999999999999999
Q ss_pred eCCceEEEEEEEEE
Q psy15127 144 NLVGSISLRASLTV 157 (633)
Q Consensus 144 n~~g~~s~~~~l~V 157 (633)
|..+.......+.|
T Consensus 176 n~~~~~~~~~~i~v 189 (191)
T 1epf_A 176 ILARGEINFKDIQV 189 (191)
T ss_dssp EGGGTEEEEEEEEE
T ss_pred EecceeEEEEEEEE
Confidence 98865444444443
No 253
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.66 E-value=2e-15 Score=140.15 Aligned_cols=111 Identities=25% Similarity=0.328 Sum_probs=86.5
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC---CeEEc---ccceEEEccCCCCCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG---RAKIL---DDRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~---~~~~~---~~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
..+|.| ..|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+... +..+. ..+.|.|.+++.+|+|.|+|.|
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 456777 5777889999999999999999999999999999988654 22332 2468999999999999999999
Q ss_pred EeCCceEEEEEEEEEEeeccccccCCCceE-EecCCcEEEEEe
Q psy15127 143 ENLVGSISLRASLTVHLLRDDFRAEPKDTR-VASGETALLECG 184 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~-~~~g~~~~l~C~ 184 (633)
.|..|..+..+.|.|..+ |.. |.... ...+..+.|.|.
T Consensus 96 ~n~~g~~~~~~~l~v~~~-P~~---p~~~~~~~~~~~~~l~w~ 134 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADT-PSS---PSIDQVEPYSSTAQVQFD 134 (215)
T ss_dssp ECSSCEEEEEEEEEECCC-CCC---CEEEEEEEETTEEEEEEE
T ss_pred EECCCceEEEEEEEECCC-CCC---CcceEEEEecceEEEEEe
Confidence 999999988899988876 332 22221 234566677775
No 254
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.66 E-value=1.7e-15 Score=137.95 Aligned_cols=111 Identities=27% Similarity=0.366 Sum_probs=95.0
Q ss_pred ceEEEcCCCC--CCeEEEEEEe------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc
Q psy15127 48 SVLGARGALS--DDQWKLIAKE------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG 110 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~ 110 (633)
..|.|.+++. +|.|+|.+.+ +. .+|.+...+....+.+|+.+.|.|.+.+.|.+.++|++++.
T Consensus 63 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~ 142 (194)
T 2a38_A 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGA 142 (194)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCE
Confidence 4799999998 9999999987 22 56778888888899999999999999999999999999999
Q ss_pred cCCCCC-eEEccc---ceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 111 KMPTGR-AKILDD---RSLQIENVGPQDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 111 ~i~~~~-~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
.+..+. .....+ ..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 143 EIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp ECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 886543 333322 279999999999999999999999998888888773
No 255
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.66 E-value=8.4e-16 Score=149.95 Aligned_cols=177 Identities=13% Similarity=0.190 Sum_probs=118.9
Q ss_pred CCCCCCcEEEEe-----eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEE
Q psy15127 410 PGPPAAPVILNT-----TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMF 484 (633)
Q Consensus 410 p~~p~~~~~~~~-----~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~ 484 (633)
|+.|..+..... ..+++.|+|+++.... +++.+.+|.|+|+..+.. +. ........+.+|.|++.|.|
T Consensus 4 Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~-~~g~i~~Y~V~~~~~~~~--~~----~~~~~~~~~~~l~p~t~Y~~ 76 (290)
T 3l5i_A 4 PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFE-ANGKILDYEVTLTRWKSH--LQ----NYTVNATKLTVNLTNDRYLA 76 (290)
T ss_dssp CSSCCCEEEEEEECSSTTCEEEEEEECCCCHHH-HCSCEEEEEEEEEETTSC--CE----EEEESSSEEEEEECSSCEEE
T ss_pred CCCCCceeEEecccccCCCceEEEEEccCCchh-cCCceEeEEEEEEeCCcC--ce----eEecCCcEEEEEcCCceEEE
Confidence 455555543322 3589999999854321 257899999999987532 22 11233457789999999999
Q ss_pred EEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhh
Q psy15127 485 IVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARA 564 (633)
Q Consensus 485 ~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~ 564 (633)
+|+|.|..|.|+++... ..+....+..++..+ .+.... +++.|+|++| . +.
T Consensus 77 ~V~A~n~~G~s~~s~~~--~~~~~~~~~~p~~~~---------------~~~~~~-~si~l~W~~p--------~---~~ 127 (290)
T 3l5i_A 77 TLTVRNLVGKSDAAVLT--IPACDFQATHPVMDL---------------KAFPKD-NMLWVEWTTP--------R---ES 127 (290)
T ss_dssp EEEEEESSCBCCCEEEE--ECCTTCCCCCCCEEE---------------EEEEET-TEEEEEEECC--------S---SC
T ss_pred EEEEEcCCCCCCCceEE--eecccccCCCcccee---------------EEEeCC-CeEEEEEeCC--------C---CC
Confidence 99999999999766321 111111222222221 444444 7999999954 1 28
Q ss_pred hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccccccccc
Q psy15127 565 RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 565 i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
+.+| .|+|+....... ....|... .......+++.+|+|++.|.|+|+|.|..|.|++
T Consensus 128 i~~Y-~v~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~ 185 (290)
T 3l5i_A 128 VKKY-ILEWCVLSDKAP--CITDWQQE------DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP 185 (290)
T ss_dssp CCEE-EEEEEEECSSSC--CCCEEEEE------ETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC
T ss_pred CCcE-EEEEEECCCCCC--CCcCeEEc------cCCCcceEEecCcCCccEEEEEEEEEeCCccccc
Confidence 9999 999988765531 01134322 2345678889999999999999999999999875
No 256
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=5.9e-16 Score=144.13 Aligned_cols=126 Identities=19% Similarity=0.258 Sum_probs=88.8
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--cc---C---------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GK---M---------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~---i---------------~~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. + ..+++.... +..|+|.
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (220)
T 2fbj_H 5 LESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMS 84 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEEC
T ss_pred ecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEEC
Confidence 345678899999999999998765 5789999853 21 1 123444432 2489999
Q ss_pred cCCCCCCeEEEEEEEeCCce---EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC--CeEEEEECC
Q psy15127 129 NVGPQDEGLYICDVENLVGS---ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE--PTLHWKKNG 200 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g~---~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~ 200 (633)
+++.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+ ...+..|+.++|.|.+....|. +.+.|++++
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~ 163 (220)
T 2fbj_H 85 KVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSG 163 (220)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCC
T ss_pred CCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCC
Confidence 99999999999999987542 223457777742 24443333 3345789999999995444476 799999987
Q ss_pred EE
Q psy15127 201 QF 202 (633)
Q Consensus 201 ~~ 202 (633)
..
T Consensus 164 ~~ 165 (220)
T 2fbj_H 164 KD 165 (220)
T ss_dssp SS
T ss_pred Ee
Confidence 54
No 257
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.65 E-value=3.1e-16 Score=147.02 Aligned_cols=126 Identities=20% Similarity=0.318 Sum_probs=86.1
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCC----CeEEEEeCC--ccCC-----------------CCCeEEcc-----cceEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPL----PTILWRRDD--GKMP-----------------TGRAKILD-----DRSLQI 127 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~----p~i~W~~~~--~~i~-----------------~~~~~~~~-----~~~L~i 127 (633)
.+|..+.+.+|++++|.|.+.+.+. +.+.|+|+. ..+. .+++.... +..|.|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 5 KESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp EEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred eCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 3467788999999999999988764 789999853 2210 12333332 258999
Q ss_pred ccCCCCCCeEEEEEEEeCCc------e---EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eE
Q psy15127 128 ENVGPQDEGLYICDVENLVG------S---ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TL 194 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g------~---~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i 194 (633)
.+++.+|+|.|.|.+.+..| . ....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v 164 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL 164 (228)
T ss_dssp CSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEE
T ss_pred cCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEE
Confidence 99999999999999998764 1 123467777741 24443333233467899999999954344777 99
Q ss_pred EEEECCE
Q psy15127 195 HWKKNGQ 201 (633)
Q Consensus 195 ~W~~~~~ 201 (633)
.|++++.
T Consensus 165 ~W~~~~~ 171 (228)
T 3bae_H 165 TWNSGSL 171 (228)
T ss_dssp EEGGGTC
T ss_pred EEeeCCc
Confidence 9998765
No 258
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.65 E-value=2.4e-16 Score=176.88 Aligned_cols=140 Identities=17% Similarity=0.213 Sum_probs=110.0
Q ss_pred CCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEec-------------CCCCeEEEEEee----------e
Q psy15127 411 GPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSD-------------LQTGWVVAAHRI----------T 467 (633)
Q Consensus 411 ~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~-------------~~~~~~~~~~~~----------~ 467 (633)
..|..+.+..++++++.|+|.+|.... +.++.+|.|+|+... ....|....... .
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~--~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~ 547 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYWPPD--FRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQN 547 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSS--CCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSS
T ss_pred cceeEEEEEEEecCeEEEEecCCCCCC--CceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccc
Confidence 445677888899999999999997542 468999999998651 123465322211 1
Q ss_pred eceEEEecCCCCCeEEEEEEE-Eecccc----CCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccce
Q psy15127 468 STSITVSDLKPDTSYMFIVRA-ENSHGL----GIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTA 542 (633)
Q Consensus 468 ~~~~~i~~L~p~~~Y~~~v~a-~n~~G~----g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 542 (633)
...++|.+|.|++.|.|+|+| .|..|. |++|... .++|...+|++|..+ .+...++++
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v-~~~T~~~~Ps~P~~l----------------~~~~~s~ts 610 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDII-YVQTDATNPSVPLDP----------------ISVSNSSSQ 610 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCB-CCBCCCCCCCCCEEE----------------EEEECSSSC
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceE-EEECCCCCCcCCcce----------------EEEeCCCCE
Confidence 477999999999999999999 999998 6777665 578888888877766 788899999
Q ss_pred EEEEEEEecCCCcccccchhhhhcceeEEEEEEcCC
Q psy15127 543 VRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIP 578 (633)
Q Consensus 543 i~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~ 578 (633)
|.|+|++| ...+|.|++| .|+|+....
T Consensus 611 I~LsW~pP--------~~~nG~I~~Y-~V~~~~~~~ 637 (897)
T 2dtg_E 611 IILKWKPP--------SDPNGNITHY-LVFWERQAE 637 (897)
T ss_dssp EEEEEECC--------CCSSSSCSEE-ECCEEEECC
T ss_pred EEEEEeCC--------CCCCCCeeEE-EEEEEECCC
Confidence 99999955 5678889999 999987543
No 259
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.65 E-value=2.7e-16 Score=147.05 Aligned_cols=126 Identities=24% Similarity=0.337 Sum_probs=88.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... +..|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (225)
T 1op3_H 5 VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMH 84 (225)
T ss_dssp EEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEEC
Confidence 446678899999999999998766 6789999853 211 123444432 3589999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----e---EEEEEEEEEEee---cccccc-CCCceEEecCCcEEEEEeCCCCCCCC-eEE
Q psy15127 129 NVGPQDEGLYICDVENLVG-----S---ISLRASLTVHLL---RDDFRA-EPKDTRVASGETALLECGPPKGQPEP-TLH 195 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g-----~---~s~~~~l~V~~~---~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~ 195 (633)
+++.+|+|.|.|.+.+..+ . ....+.|.|... +|.+.. .+.. .+.+|+.+.|.|.+....|.+ .|.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~ 163 (225)
T 1op3_H 85 KMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVS 163 (225)
T ss_dssp SCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEE
T ss_pred CCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEE
Confidence 9999999999999998764 1 223467888752 133332 3322 356899999999954334766 999
Q ss_pred EEECCEE
Q psy15127 196 WKKNGQF 202 (633)
Q Consensus 196 W~~~~~~ 202 (633)
|++++..
T Consensus 164 W~~~~~~ 170 (225)
T 1op3_H 164 WNSGALT 170 (225)
T ss_dssp CCTTSCC
T ss_pred EecCCCc
Confidence 9988753
No 260
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.65 E-value=6.8e-16 Score=166.41 Aligned_cols=127 Identities=21% Similarity=0.368 Sum_probs=98.9
Q ss_pred CceEEEcCCeEEEEEEE-eccCCCeEEEEeCCccCC-------------CCCeEEcccceEEEccCCCCCCeEEEEEEEe
Q psy15127 79 SDATVLSGSVVEFVCRV-GGDPLPTILWRRDDGKMP-------------TGRAKILDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 79 ~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~~i~-------------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
....+.+|++++|.|.+ .+.|.+.|+|+|++..+. .++.....+++|.|.+++.+|+|.|+|.+.|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 34678999999999999 778899999999876331 2345556667999999999999999999999
Q ss_pred CCceE-EEEEEEEEEeeccccccCCCceEEecCCcE-EEEEeCCCCCCCCeEEEEECCEEecc
Q psy15127 145 LVGSI-SLRASLTVHLLRDDFRAEPKDTRVASGETA-LLECGPPKGQPEPTLHWKKNGQFIDL 205 (633)
Q Consensus 145 ~~g~~-s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~~~~p~~~i~W~~~~~~~~~ 205 (633)
..+.. +..+.|.|..++....+.+....+.+|+.. .|.|.+..+.|.+.|.|+++|..+..
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~ 516 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVP 516 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCC
Confidence 98886 788999998863333333334446666655 56999544479999999999998865
No 261
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.65 E-value=1.1e-14 Score=150.01 Aligned_cols=116 Identities=19% Similarity=0.198 Sum_probs=82.4
Q ss_pred CCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEE
Q psy15127 368 DSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYT 447 (633)
Q Consensus 368 d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~ 447 (633)
..|.|+|.|.|..|.... .+.+... ....|.+|..+.+.....+.+.|+|++|... ++.++.|.
T Consensus 358 t~Y~f~V~A~N~~G~~~S--~~~~~~~-----------~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~---~g~~l~Ye 421 (488)
T 2q7n_A 358 EIHNFTLTGRNPLGQAQS--AVVINVT-----------ERVAPHDPTSLKVKDINSTVVTFSWYLPGNF---TKINLLCQ 421 (488)
T ss_dssp CCCEEEEEEEETTEEEEE--EEECCGG-----------GTBCCCCCEEEEEEECSTTCEEEEEEEEEEC---SSSEEEEE
T ss_pred cEEEEEEEEEeCCCCccc--eEEEEec-----------CCCCCCCCeEEEEEecCCCEEEEEEeCCCCC---CCcceEEE
Confidence 567889999999997433 3333211 1134677888887777889999999999643 46789999
Q ss_pred EEEEEecCCCCeEEEEEee--eeceE--EEecCCCCCeEEEEEEEEeccccCCCCCCC
Q psy15127 448 VEYFSSDLQTGWVVAAHRI--TSTSI--TVSDLKPDTSYMFIVRAENSHGLGIPSPVS 501 (633)
Q Consensus 448 v~~~~~~~~~~~~~~~~~~--~~~~~--~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 501 (633)
|+|+..+. ..|....... ....+ +|.+|.|++.|.|+|+|.| .|.|.+|.++
T Consensus 422 V~Yr~~~~-~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS 477 (488)
T 2q7n_A 422 IEICKANS-KKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWS 477 (488)
T ss_dssp EEEBCTTS-CCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCC
T ss_pred EEEEECCC-CCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCc
Confidence 99998753 4553211111 13445 9999999999999999999 8987555544
No 262
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.64 E-value=1.7e-15 Score=140.17 Aligned_cols=113 Identities=29% Similarity=0.341 Sum_probs=91.9
Q ss_pred ceEEEcCCC-C--CCeEEEEEEe------------cC-------cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEE
Q psy15127 48 SVLGARGAL-S--DDQWKLIAKE------------AL-------IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILW 105 (633)
Q Consensus 48 ~~L~i~~v~-~--~G~Y~C~a~~------------v~-------~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W 105 (633)
..|.|.+++ . +|.|+|.|.| +. ..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|
T Consensus 63 ~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W 142 (212)
T 2yd6_A 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITW 142 (212)
T ss_dssp EEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEE
T ss_pred eEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEE
Confidence 469999994 5 9999999988 22 227788888888899999999999999999999999
Q ss_pred EeCCccCCCC----CeEEcc---cceEEEccCCCCCCeEEEEEEEeCCceE-EEEEEEEEEee
Q psy15127 106 RRDDGKMPTG----RAKILD---DRSLQIENVGPQDEGLYICDVENLVGSI-SLRASLTVHLL 160 (633)
Q Consensus 106 ~~~~~~i~~~----~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-s~~~~l~V~~~ 160 (633)
+|++..+... +..... .+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 143 ~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 143 FKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp EETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 9999988643 333322 3789999999999999999999999985 56678888765
No 263
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.64 E-value=1.7e-15 Score=138.31 Aligned_cols=131 Identities=15% Similarity=0.200 Sum_probs=102.2
Q ss_pred EEEecccCCCCCceEEeeCc---eEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeC---CCceEEEcCCe
Q psy15127 29 VSISGDPGFDSRRSRSIFGS---VLGARGALS--DDQWKLIAKE------------ALIKPFPISE---PSDATVLSGSV 88 (633)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~---~~~~~~~~G~~ 88 (633)
|..++.+...+.++.+..++ +|.|.+++. +|.|+|.+.+ +..+|.+... +....+.+|+.
T Consensus 41 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~ 120 (197)
T 3lcy_A 41 WYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGST 120 (197)
T ss_dssp EEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSC
T ss_pred EEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCe
Confidence 33445555556677666655 799999998 9999999988 3344444322 34567889999
Q ss_pred EEEEEEEeccCCCeEEEEeCCccCCCCCeEEc-cc---ceEEEccCCC-CCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 89 VEFVCRVGGDPLPTILWRRDDGKMPTGRAKIL-DD---RSLQIENVGP-QDEGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 89 ~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~-~~---~~L~i~~v~~-~d~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
+.|.|.+.+.|.|.+.|++++..+..+..... .. ..|.|.++.. +|+|.|+|.|.|..|..+..+.|.|..
T Consensus 121 ~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 121 LRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 99999999999999999999998876543332 22 6799999995 899999999999999999998888864
No 264
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.64 E-value=1.8e-15 Score=145.05 Aligned_cols=128 Identities=17% Similarity=0.248 Sum_probs=89.2
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccC------CCeEEEEeCC--ccC-------------CCCCeEEcc---cceEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDP------LPTILWRRDD--GKM-------------PTGRAKILD---DRSLQ 126 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p------~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~ 126 (633)
.+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... ...|+
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 35677778889999999999999998876 6789999952 221 023444332 34899
Q ss_pred EccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEeec-----------------ccc-ccCCCceEEecCCcEEEEEeCCC
Q psy15127 127 IENVGPQDEGLYICDVENLVGS-ISLRASLTVHLLR-----------------DDF-RAEPKDTRVASGETALLECGPPK 187 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~~-----------------p~~-~~~~~~~~~~~g~~~~l~C~~~~ 187 (633)
|.+++.+|+|.|.|.+.+..+. ....+.|.|..++ +.+ ...+....+.+|++++|.|.+ .
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~ 163 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKA-S 163 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEE-E
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEE-e
Confidence 9999999999999999887543 2344577787651 122 122233467788888888884 4
Q ss_pred CCC--CCeEEEEEC
Q psy15127 188 GQP--EPTLHWKKN 199 (633)
Q Consensus 188 ~~p--~~~i~W~~~ 199 (633)
+.+ .+.+.|+|+
T Consensus 164 ~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 164 GYSFTGYFINWVKK 177 (264)
T ss_dssp SSCGGGSEEEEEEE
T ss_pred CCccCCeEEEEEEE
Confidence 444 368888875
No 265
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.64 E-value=3.1e-16 Score=148.95 Aligned_cols=132 Identities=23% Similarity=0.340 Sum_probs=93.8
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe----------------CCccCCC----CCeEEcc----cceEEEc
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR----------------DDGKMPT----GRAKILD----DRSLQIE 128 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~----------------~~~~i~~----~~~~~~~----~~~L~i~ 128 (633)
.+...|..+.+.+|++++|.|.+.+.+.+.|.|+| ++..... +++.... +.+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 45677888899999999999999988889999999 2222211 2333322 3479999
Q ss_pred cCCCCCCeEEEEEEEeCCc----eEEEEEEEEEEe-----eccccc-cCCCceEEecCCcEEEEEeCCCCCCC-C-eEEE
Q psy15127 129 NVGPQDEGLYICDVENLVG----SISLRASLTVHL-----LRDDFR-AEPKDTRVASGETALLECGPPKGQPE-P-TLHW 196 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g----~~s~~~~l~V~~-----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~-~-~i~W 196 (633)
+++.+|+|.|.|.+.+..+ .....+.|.|.. .+|.+. ..+....+.+|+.++|.|.+ .+.|+ + .+.|
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~-~g~~p~~~~v~W 161 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLA-TGFYPDHVELSW 161 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEE-EEEBSSCEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEE-ccCcCCceEEEE
Confidence 9999999999999987643 233455677764 123332 33444455679999999994 55443 3 9999
Q ss_pred EECCEEecc
Q psy15127 197 KKNGQFIDL 205 (633)
Q Consensus 197 ~~~~~~~~~ 205 (633)
+++|..+..
T Consensus 162 ~k~g~~l~~ 170 (246)
T 4dzb_B 162 WVNGKEVHS 170 (246)
T ss_dssp EETTEEECT
T ss_pred EECCEECCC
Confidence 999987753
No 266
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.64 E-value=2.8e-15 Score=135.02 Aligned_cols=132 Identities=20% Similarity=0.292 Sum_probs=103.5
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEee-----CceEEEcCCCC--CCeEEEEEEe-------------cCcCCe
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIF-----GSVLGARGALS--DDQWKLIAKE-------------ALIKPF 73 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~ 73 (633)
+.|.+.|+|+ .+|.+.....+..+.. ++.|.|.+++. +|.|+|.+.+ +..+|.
T Consensus 28 ~~p~~~v~W~-------k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 100 (182)
T 1rhf_A 28 GMEEPDIQWV-------KDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPF 100 (182)
T ss_dssp SCSSCCEEEE-------ETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCE
T ss_pred CCCCCeEEEE-------ECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCe
Confidence 3466667743 3444444444433332 26899999998 9999999987 566788
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCC-eEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEE-E
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLP-TILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSIS-L 151 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p-~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s-~ 151 (633)
+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|.++ +|+|.|+|.|.|..|... .
T Consensus 101 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~---~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~ 175 (182)
T 1rhf_A 101 FTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP---SPSVLNVTGV--TQSTMFSCEAHNLKGLASSR 175 (182)
T ss_dssp EEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE---SSEEEEECCC--SSCEEEEEEEEETTEEEECC
T ss_pred EEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC---CceEEEEecc--ccCeEEEEEEECCCCCcccc
Confidence 8888888899999999999999999999 9999999998865432 5578999998 589999999999999864 4
Q ss_pred EEEEEE
Q psy15127 152 RASLTV 157 (633)
Q Consensus 152 ~~~l~V 157 (633)
.+.|.|
T Consensus 176 ~~~l~V 181 (182)
T 1rhf_A 176 TATVHL 181 (182)
T ss_dssp CEEEEE
T ss_pred eEEEEe
Confidence 777766
No 267
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.64 E-value=1.2e-15 Score=142.30 Aligned_cols=129 Identities=19% Similarity=0.263 Sum_probs=88.3
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--cc---C---------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GK---M---------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~---i---------------~~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. + ..+|+.... +..|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (223)
T 1dee_B 5 VESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMN 84 (223)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEEC
Confidence 345678899999999999998765 4689999853 21 1 023444432 2479999
Q ss_pred cCCCCCCeEEEEEEEeCCc------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEE
Q psy15127 129 NVGPQDEGLYICDVENLVG------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKK 198 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~ 198 (633)
+++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+.+|+.++|.|.+....|.+ .+.|++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 164 (223)
T 1dee_B 85 SLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKY 164 (223)
T ss_dssp SCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred CCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEc
Confidence 9999999999999998653 1223457888741 23333221122356899999999954444776 999999
Q ss_pred -CCEEec
Q psy15127 199 -NGQFID 204 (633)
Q Consensus 199 -~~~~~~ 204 (633)
+|..+.
T Consensus 165 ~~g~~l~ 171 (223)
T 1dee_B 165 KNNSDIS 171 (223)
T ss_dssp TTSCBCS
T ss_pred cCCCccc
Confidence 776553
No 268
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.64 E-value=6.2e-16 Score=143.28 Aligned_cols=122 Identities=20% Similarity=0.239 Sum_probs=95.6
Q ss_pred CCceEEee------CceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEE-ec
Q psy15127 39 SRRSRSIF------GSVLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRV-GG 97 (633)
Q Consensus 39 ~~~~~~~~------~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~-~~ 97 (633)
..|+.+.. +++|.|.+++. +|.|+|.+.+ |..+|.+...+....+.+|+.++|.|.+ .+
T Consensus 69 ~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 69 KGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBC
T ss_pred ccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCC
Confidence 34555543 57899999998 9999999988 4455554444444457889999999999 78
Q ss_pred cCCCeEEEEeCCc--cCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 98 DPLPTILWRRDDG--KMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 98 ~p~p~i~W~~~~~--~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
.|.+.+.|++++. .+.........++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 149 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 149 SLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CSSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CCCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 9999999999544 33333333334579999999999999999999999999999998888754
No 269
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.63 E-value=7.2e-17 Score=148.80 Aligned_cols=130 Identities=18% Similarity=0.158 Sum_probs=88.7
Q ss_pred eeeCCCceE-EEcCCeEEEEEEEeccC----CCeEEEEeCCccCCCCC---------eEEcccceEEEccCCCCCCeEEE
Q psy15127 74 PISEPSDAT-VLSGSVVEFVCRVGGDP----LPTILWRRDDGKMPTGR---------AKILDDRSLQIENVGPQDEGLYI 139 (633)
Q Consensus 74 ~~~~~~~~~-~~~G~~~~L~C~~~~~p----~p~i~W~~~~~~i~~~~---------~~~~~~~~L~i~~v~~~d~G~Y~ 139 (633)
++..|.... +.+|++++|.|.+.+.+ .+.|+|+|++..+.... ........|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344555444 88999999999998874 24899999997664321 01112347999999999999999
Q ss_pred EEEEeCCceE--EEEEEE--EEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEec
Q psy15127 140 CDVENLVGSI--SLRASL--TVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFID 204 (633)
Q Consensus 140 C~~~n~~g~~--s~~~~l--~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~ 204 (633)
|.|.|..+.. ++.+.+ .+..+ |.+.+.+.......|+.+.|.|.+....|. ..+.|+++|..+.
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~~~-P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRPKA-PQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCCBC-CEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EEEEccCCCCceEEEeccCCCCCcC-CeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 9999987753 333333 33334 555444333223369999999995433555 4899999988653
No 270
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.63 E-value=2.4e-15 Score=137.39 Aligned_cols=138 Identities=19% Similarity=0.251 Sum_probs=103.0
Q ss_pred CCCCccccccceeeEEEEecccCCC-CCceEEee--Cc--eEEEcCCCC--CCeEEEEEEe------------cCcCCee
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFD-SRRSRSIF--GS--VLGARGALS--DDQWKLIAKE------------ALIKPFP 74 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~--~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~ 74 (633)
+.|.+.|+|+. +|.+... +.++.+.. ++ .|.|.+++. +|.|+|.|.| +..+|.+
T Consensus 30 ~~p~~~v~W~~-------~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~ 102 (197)
T 2j8h_A 30 GHPKPIVKWYR-------QGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI 102 (197)
T ss_dssp CSSCCEEEEEE-------TTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred ecCCCEEEEEE-------CCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcC
Confidence 44556666433 3443332 34554432 33 899999999 9999999988 3333433
Q ss_pred e-----eCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEc---ccceEEEcc-CCCCCCeEEEEEEEe
Q psy15127 75 I-----SEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKIL---DDRSLQIEN-VGPQDEGLYICDVEN 144 (633)
Q Consensus 75 ~-----~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~---~~~~L~i~~-v~~~d~G~Y~C~~~n 144 (633)
. ..+....+.+|+.+.|.|.+.+.|.|.+.|+|++..+... +.... ....|.|.+ ++.+|+|.|+|.|.|
T Consensus 103 ~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N 182 (197)
T 2j8h_A 103 HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKN 182 (197)
T ss_dssp CCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEE
T ss_pred CCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEe
Confidence 2 2234567889999999999999999999999999988643 33332 236899999 999999999999999
Q ss_pred CCceEEEEEEEEEE
Q psy15127 145 LVGSISLRASLTVH 158 (633)
Q Consensus 145 ~~g~~s~~~~l~V~ 158 (633)
..|..+..+.|.|.
T Consensus 183 ~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 183 RFGIDQKTVELDVA 196 (197)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEeEEEEEEEe
Confidence 99999988888886
No 271
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.63 E-value=2.2e-15 Score=120.14 Aligned_cols=90 Identities=30% Similarity=0.469 Sum_probs=78.8
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC---CeEEcc---cceEEEccCCCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG---RAKILD---DRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~---~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.||.|...|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+... +..+.. ..+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 4788988999999999999999999999999999999999988643 333332 2479999999999999999999
Q ss_pred eCCceEEEEEEEEEEe
Q psy15127 144 NLVGSISLRASLTVHL 159 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~ 159 (633)
|..|..+..+.|.|..
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999999999998874
No 272
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.63 E-value=9.4e-15 Score=144.04 Aligned_cols=186 Identities=11% Similarity=0.031 Sum_probs=119.0
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEE---EEeeeeceEEEecCC----CCCe
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVA---AHRITSTSITVSDLK----PDTS 481 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~L~----p~~~ 481 (633)
+|.+|..+.+.......+.++|.++... +.+..|.|.|+..+.. .+..- ........+.+..+. .++.
T Consensus 97 pp~~P~~l~c~~~~~~~~~c~W~~~~~~----~~~~~Y~l~y~~~~~~-~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~ 171 (314)
T 3bpo_C 97 PESAVTELQCIWHNLSYMKCSWLPGRNT----SPDTNYTLYYWHRSLE-KIHQCENIFREGQYFGCSFDLTKVKDSSFEQ 171 (314)
T ss_dssp CCSSCEEEEEEEETTTEEEEEEECCC-------CCCCEEEEEEESSCS-SCEECCCEEEETTEEEEEEECCC--------
T ss_pred CCCCCEeceEEECCCCeEEEEECCCCCC----CCCccEEEEEEeCCCC-ccccCcCeecCCCeEEEEECCCCccccceeE
Confidence 4567778888888889999999998753 3578899998876432 22211 111123567777665 4789
Q ss_pred EEEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccch
Q psy15127 482 YMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDE 561 (633)
Q Consensus 482 Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~ 561 (633)
|.|+|.|.|..|.+..+... +..+....|.+|.++ ++. +..+++.|+|++| ...
T Consensus 172 y~~~V~a~n~~G~~~~~~~~-~~~~~~v~P~pP~~l----------------~~~-~~~~~l~lsW~~P--------~~~ 225 (314)
T 3bpo_C 172 HSVQIMVKDNAGKIKPSFNI-VPLTSRVKPDPPHIK----------------NLS-FHNDDLYVQWENP--------QNF 225 (314)
T ss_dssp CCEEEEEEETTSCSCCEEEE-ECSSSSEECCCCEEE----------------EEE-EETTEEEEEEECC--------TTC
T ss_pred EEEEEEEEcCCCceecccEE-EehhheEeeCCCCEE----------------EEE-EcCCcEEEEEeCC--------Ccc
Confidence 99999999999998654321 111222346656555 565 6778999999965 223
Q ss_pred hhhhcceeEEEEEEcCCCcccceeeeeecccee-------Ee-ecCCccceEEeeccccceeEEEEEeccccc----ccc
Q psy15127 562 ARARLGTKVVNLRELIPTASTAVRITWEKYNMA-------TV-MNAATTTSYTVTHLRKFTKYEFFLVPFFKT----VEG 629 (633)
Q Consensus 562 ~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~-------~~-~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~----g~g 629 (633)
++.+.+| .|+|+..+... |+..... .+ ......++++|.+|+|++.|.|+|+|.+.. +.|
T Consensus 226 ~~~~l~Y-ev~y~~~~~~~-------w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g 297 (314)
T 3bpo_C 226 ISRCLFY-EVEVNNSQTET-------HNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDK 297 (314)
T ss_dssp CGGGEEE-EEEEEC--CCC-------EEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCC
T ss_pred CCceEEE-EEEEEECCCCc-------ceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCC
Confidence 4557899 99999876543 6432110 00 012357889999999999999999999963 355
Q ss_pred ccCC
Q psy15127 630 ARLD 633 (633)
Q Consensus 630 ~~s~ 633 (633)
.+|+
T Consensus 298 ~WS~ 301 (314)
T 3bpo_C 298 LWSN 301 (314)
T ss_dssp CCCC
T ss_pred eeCC
Confidence 5443
No 273
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.62 E-value=4.8e-15 Score=144.31 Aligned_cols=123 Identities=18% Similarity=0.359 Sum_probs=86.4
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccCC------------------CCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKMP------------------TGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i~------------------~~~~~~~~-----~~~L~i~ 128 (633)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. .+++.... ..+|+|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 106 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELS 106 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEEC
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEEC
Confidence 456688899999999999998766 5789999953 2110 13333321 2479999
Q ss_pred cCCCCCCeEEEEEEEeCC-c--e--EEEEEEEEEEee---------------ccccccCCCceEEecCCcEEEEEeCCCC
Q psy15127 129 NVGPQDEGLYICDVENLV-G--S--ISLRASLTVHLL---------------RDDFRAEPKDTRVASGETALLECGPPKG 188 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~-g--~--~s~~~~l~V~~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~ 188 (633)
+++.+|+|.|.|.+.+.. | . ....+.|.|..+ ++.+...|....+.+|++++|.|. ..+
T Consensus 107 ~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~-~~~ 185 (291)
T 2gki_A 107 SLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCK-SSQ 185 (291)
T ss_dssp SCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEE-ESS
T ss_pred cCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEE-cCC
Confidence 999999999999999874 2 1 123346777661 233445566677888999999998 455
Q ss_pred CCCC------eEEEEEC
Q psy15127 189 QPEP------TLHWKKN 199 (633)
Q Consensus 189 ~p~~------~i~W~~~ 199 (633)
.+.+ .+.|+|+
T Consensus 186 ~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 186 SLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp CCEETTTTEECEEEEEE
T ss_pred ccccccccceeEEEEEE
Confidence 5554 8889875
No 274
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.62 E-value=1.9e-16 Score=147.23 Aligned_cols=168 Identities=15% Similarity=0.111 Sum_probs=108.8
Q ss_pred CcCCeeeeCCCceE--EEcCCeEEEEEEEecc---CC-CeEEEEeCCccCCCCCe---------EEcccceEEEccCCCC
Q psy15127 69 LIKPFPISEPSDAT--VLSGSVVEFVCRVGGD---PL-PTILWRRDDGKMPTGRA---------KILDDRSLQIENVGPQ 133 (633)
Q Consensus 69 ~~~p~~~~~~~~~~--~~~G~~~~L~C~~~~~---p~-p~i~W~~~~~~i~~~~~---------~~~~~~~L~i~~v~~~ 133 (633)
..+|.+...|+... +.+|++++|.|.+.+. |. +.|+|+|++..+..... .....+.|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 45677766666655 7899999999999876 33 78999999987653211 1112357999999999
Q ss_pred CCeEEEEEEEeCCceE--EEEEEE--EEEeeccccccCCCceEEecCCcEEEEEeCCCC-CCCC-eEEEEECCEEeccCC
Q psy15127 134 DEGLYICDVENLVGSI--SLRASL--TVHLLRDDFRAEPKDTRVASGETALLECGPPKG-QPEP-TLHWKKNGQFIDLES 207 (633)
Q Consensus 134 d~G~Y~C~~~n~~g~~--s~~~~l--~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~p~~-~i~W~~~~~~~~~~~ 207 (633)
|+|.|+|.|.|..+.. ...+.+ .+..+ |.+.+.+.......|+.+.|.|.+ .| +|.+ .|.|+++|..+....
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~-P~v~~~~~~~~~~~g~~~~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~ 164 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRA-PQVYILPPPAEQLSRKDVSLTCLV-VGFNPGDISVEWTSNGHTEENYK 164 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCCCCCCBC-CEEEEECCCGGGTTSSEEEEEEEE-EEEBSSCCEEEEEETTEEECCEE
T ss_pred CCCeEEEEEECCcCCCcceEEEeecCCCCCC-CEEEEECCChHHhcCCceEEEEEE-EeeeCCCcEEEEEECCEeccCce
Confidence 9999999999987643 333322 23333 554443333222359999999995 55 6765 999999999874321
Q ss_pred Ce-eEEeccceeeeE---EE-------eeeEEEEeecCCCCC
Q psy15127 208 SK-SLDLSRRTLGWL---RV-------RPLYWNVARPRANLN 238 (633)
Q Consensus 208 ~~-~~~~~~~~~~~~---~~-------~g~y~C~a~~~~~~~ 238 (633)
.. .....++.+.+. .+ .|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 165 DTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred ecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 11 111222222221 11 479999999987643
No 275
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.62 E-value=2.9e-15 Score=140.58 Aligned_cols=128 Identities=19% Similarity=0.233 Sum_probs=83.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC-----------------CCCCeEEcc-----cceEEEcc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM-----------------PTGRAKILD-----DRSLQIEN 129 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~-----~~~L~i~~ 129 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ... ..+++.... +..|+|.+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (232)
T 1dn0_B 5 QQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSS 84 (232)
T ss_dssp EEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECC
Confidence 446678899999999999998764 5689999853 211 023444432 23899999
Q ss_pred CCCCCCeEEEEEEEe--CCc----eEEEEEEEEEEee---cccccc-CCCceEEecC-CcEEEEEeCCCCCCCC-eEEEE
Q psy15127 130 VGPQDEGLYICDVEN--LVG----SISLRASLTVHLL---RDDFRA-EPKDTRVASG-ETALLECGPPKGQPEP-TLHWK 197 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n--~~g----~~s~~~~l~V~~~---~p~~~~-~~~~~~~~~g-~~~~l~C~~~~~~p~~-~i~W~ 197 (633)
++.+|+|.|.|.+.+ ..+ .....+.|.|... +|.+.. .|. ..+..| +.++|.|.+....|.+ .+.|+
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~~~~g~~~v~L~C~~~g~~P~p~~v~W~ 163 (232)
T 1dn0_B 85 VTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSC-ENSPSDTSSVAVGCLAQDFLPDSITFSWK 163 (232)
T ss_dssp CCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEBSSCCEEEEE
T ss_pred CCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccc-cccCCCCCcEEEEEEEEEEeCCCeEEEEE
Confidence 999999999999983 211 1223457778652 133322 222 234578 9999999954445776 99999
Q ss_pred E-CCEEec
Q psy15127 198 K-NGQFID 204 (633)
Q Consensus 198 ~-~~~~~~ 204 (633)
+ +|..+.
T Consensus 164 ~~~g~~l~ 171 (232)
T 1dn0_B 164 YKNNSDIS 171 (232)
T ss_dssp ETTSCEEC
T ss_pred cCCCCcee
Confidence 9 877654
No 276
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.62 E-value=3.1e-15 Score=135.06 Aligned_cols=150 Identities=14% Similarity=0.188 Sum_probs=107.0
Q ss_pred ccccCCCCCCCCCCccccccceeeEEEEeccc-------CCCCCceEEe----e--CceEEEcCCCC--CCeEEEEEEec
Q psy15127 4 HLDTNHAHPMSSPRAEIEPATRTNRVSISGDP-------GFDSRRSRSI----F--GSVLGARGALS--DDQWKLIAKEA 68 (633)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~----~--~~~L~i~~v~~--~G~Y~C~a~~v 68 (633)
.+.+.|... +.|.+.|.|+...........+ .....|+.+. . +.+|.|.+++. +|.|+|.+.+.
T Consensus 12 ~v~L~C~~~-~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 90 (184)
T 2ny1_B 12 TVELTCTAS-QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQ 90 (184)
T ss_dssp CEEECCBCS-SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTE
T ss_pred CEEEEEEEc-CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcC
Confidence 344555544 5677888876643321111100 0112334333 2 34599999999 99999999881
Q ss_pred ----CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 ----LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ----~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.........+....+.+|+.++|.|.+.+.|.+.++|++++..+ ......|.|.+++.+|+|.|+|.|.|
T Consensus 91 ~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 91 KEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVSQLELQDSGTWTCTVLQ 164 (184)
T ss_dssp EEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------EEESSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------ccCceEEEEecCCcCCCeEEEEEEEE
Confidence 11111122355668999999999999988999999999987654 33567999999999999999999999
Q ss_pred CCceEEEEEEEEEEee
Q psy15127 145 LVGSISLRASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~ 160 (633)
..+..+..+.|.|...
T Consensus 165 ~~~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 165 NQKKVEFKIDIVVLAF 180 (184)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEEEEec
Confidence 9999999999999876
No 277
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.62 E-value=7e-16 Score=148.72 Aligned_cols=147 Identities=18% Similarity=0.206 Sum_probs=92.5
Q ss_pred CCeEEEEEEe------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC------CC---------
Q psy15127 58 DDQWKLIAKE------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM------PT--------- 114 (633)
Q Consensus 58 ~G~Y~C~a~~------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i------~~--------- 114 (633)
.+.|.|.|.+ ......+...|..+.+.+|++++|.|.+.+ +.+.+.|+|.. ... ..
T Consensus 8 ~~~y~~~~~~~~g~~~~~~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~ 86 (270)
T 3qib_D 8 LIAYLKQATKGGGGSGGGGGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDM 86 (270)
T ss_dssp --------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHH
T ss_pred HHHHHHHHhccCCccccccceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCc
Confidence 7899999988 234466777788899999999999999865 67899999832 111 00
Q ss_pred -C-CeEEcc----cceEEEccCCCCCCeEEEEEEEeCC----ceEEEEEEEEEEee-----ccccc-cCCCceEEecCCc
Q psy15127 115 -G-RAKILD----DRSLQIENVGPQDEGLYICDVENLV----GSISLRASLTVHLL-----RDDFR-AEPKDTRVASGET 178 (633)
Q Consensus 115 -~-~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~n~~----g~~s~~~~l~V~~~-----~p~~~-~~~~~~~~~~g~~ 178 (633)
+ ++.... +.+|.|.+++.+|+|.|.|.+.+.. ......+.|.|... +|.+. ..+....+..|+.
T Consensus 87 ~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 166 (270)
T 3qib_D 87 TEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQK 166 (270)
T ss_dssp HHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSE
T ss_pred cCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCc
Confidence 0 222221 3579999999999999999998642 22334456777752 13322 2233334456999
Q ss_pred EEEEEeCCCCCCCC-eEEEEECCEEecc
Q psy15127 179 ALLECGPPKGQPEP-TLHWKKNGQFIDL 205 (633)
Q Consensus 179 ~~l~C~~~~~~p~~-~i~W~~~~~~~~~ 205 (633)
++|.|.+....|.+ .+.|+++|..+..
T Consensus 167 v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 167 ATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp EEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred eEEEEEecceeCCCeEEEEEECCEECCC
Confidence 99999954437766 8999999998864
No 278
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.62 E-value=2.3e-15 Score=142.37 Aligned_cols=130 Identities=18% Similarity=0.260 Sum_probs=90.7
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC------------------CCCCeEEcc-----cce
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM------------------PTGRAKILD-----DRS 124 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~ 124 (633)
+.+...|..+.+.+|++++|.|.+.+. +.+.+.|+|+. ..+ ..+++.... +.+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 345667888999999999999999875 56789999853 211 123444432 357
Q ss_pred EEEccCCCCCCeEEEEEEEeCCc-----e--EEEEEEEEEEee------cccccc-CCCceEEecCCcEEEEEeCCCCCC
Q psy15127 125 LQIENVGPQDEGLYICDVENLVG-----S--ISLRASLTVHLL------RDDFRA-EPKDTRVASGETALLECGPPKGQP 190 (633)
Q Consensus 125 L~i~~v~~~d~G~Y~C~~~n~~g-----~--~s~~~~l~V~~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p 190 (633)
|.|.+++.+|+|.|.|.+.+... . ....+.|.|... +|...+ .+....+.+|+.++|.|.+....|
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESS
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEEC
Confidence 99999999999999999987631 1 223467888753 122222 244344567999999999543346
Q ss_pred C-CeEEEEECCE
Q psy15127 191 E-PTLHWKKNGQ 201 (633)
Q Consensus 191 ~-~~i~W~~~~~ 201 (633)
. +.+.|++++.
T Consensus 162 ~~~~v~W~~~~~ 173 (242)
T 1hxm_B 162 DVIKIHWEEKKS 173 (242)
T ss_dssp CCEEEEEEESSS
T ss_pred CCeEEEEEcCCC
Confidence 5 6999999875
No 279
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.61 E-value=5.9e-15 Score=134.10 Aligned_cols=137 Identities=23% Similarity=0.389 Sum_probs=103.5
Q ss_pred CCCCccccccceeeEEEEecccCCCCCceEEee-CceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCC
Q psy15127 14 SSPRAEIEPATRTNRVSISGDPGFDSRRSRSIF-GSVLGARGALS--DDQWKLIAKE------------ALIKPFPISEP 78 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~ 78 (633)
+.|.+.|. |..+|.+...+.++.+.. ++.|.|.+++. +|.|+|.+.+ +..+|.+...+
T Consensus 30 ~~p~~~v~-------W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~ 102 (192)
T 2va4_A 30 GSPEPAIS-------WFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLK 102 (192)
T ss_dssp CSSCCEEE-------EEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred cCCCCeEE-------EEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccccC
Confidence 34555666 444555556666666544 45799999999 9999999988 44556665443
Q ss_pred CceEEEcCCeEEEEEEEeccCCCeEEEEeC--CccCCC------CCeEEcc---cceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 79 SDATVLSGSVVEFVCRVGGDPLPTILWRRD--DGKMPT------GRAKILD---DRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 79 ~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--~~~i~~------~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
...+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ++..... ...|.|.+++.+|+|.|+|.|.|..|
T Consensus 103 -~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 181 (192)
T 2va4_A 103 -NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIG 181 (192)
T ss_dssp -CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred -cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCC
Confidence 45678899999999999999999999998 444432 2222221 35899999999999999999999999
Q ss_pred eEEEEEEEEEE
Q psy15127 148 SISLRASLTVH 158 (633)
Q Consensus 148 ~~s~~~~l~V~ 158 (633)
..+..+.|.|.
T Consensus 182 ~~~~~~~l~V~ 192 (192)
T 2va4_A 182 GHQKSMYLDIE 192 (192)
T ss_dssp EEEEEEEEEEC
T ss_pred ceEEEEEEEeC
Confidence 98888888873
No 280
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.61 E-value=2.4e-15 Score=143.59 Aligned_cols=129 Identities=19% Similarity=0.303 Sum_probs=88.5
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------C------------CCCeEEcc-----cceEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------P------------TGRAKILD-----DRSLQ 126 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------~------------~~~~~~~~-----~~~L~ 126 (633)
.+..|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ . .+++.... +..|+
T Consensus 9 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 88 (261)
T 2xqy_G 9 QLQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQ 88 (261)
T ss_dssp EEECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred eEECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEE
Confidence 34557788899999999999998766 5789999863 211 0 23444432 34899
Q ss_pred EccCCCCCCeEEEEEEEeCCc---eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 127 IENVGPQDEGLYICDVENLVG---SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g---~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
|.+++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+..|+.++|.|.+....|.+ .|.|+++
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~ 168 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 168 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecC
Confidence 999999999999999998643 1223457777751 24433322223466899999999954335766 9999988
Q ss_pred CEE
Q psy15127 200 GQF 202 (633)
Q Consensus 200 ~~~ 202 (633)
+..
T Consensus 169 g~~ 171 (261)
T 2xqy_G 169 SLS 171 (261)
T ss_dssp TCC
T ss_pred CCc
Confidence 754
No 281
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.60 E-value=5.8e-15 Score=142.06 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=62.9
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccC-----CCeEEEEeCC--ccC-------------CCCCeEEcc---cceEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDP-----LPTILWRRDD--GKM-------------PTGRAKILD---DRSLQI 127 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-----~p~i~W~~~~--~~i-------------~~~~~~~~~---~~~L~i 127 (633)
.+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... ..+|+|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 45667778888899999999999998776 4789999853 211 123444332 247999
Q ss_pred ccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee
Q psy15127 128 ENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~ 160 (633)
.+++.+|+|.|.|.+.+..+. ....+.|.|...
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 128 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSS 128 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC----
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccC
Confidence 999999999999999987543 233456666653
No 282
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.60 E-value=2.2e-15 Score=145.89 Aligned_cols=125 Identities=18% Similarity=0.299 Sum_probs=88.5
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCCc--cCC------------------CCCeEEccc-----ceE
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDDG--KMP------------------TGRAKILDD-----RSL 125 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~~--~i~------------------~~~~~~~~~-----~~L 125 (633)
.+.. |..+.+.+|++++|.|.+.+. +.+.+.|+|... ... .+++....+ .+|
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 3444 888999999999999999764 557899998431 110 123333321 379
Q ss_pred EEccCCCCCCeEEEEEEEeC---------CceEEEEEEEEEEe--------------eccccccCCCceEEecCCcEEEE
Q psy15127 126 QIENVGPQDEGLYICDVENL---------VGSISLRASLTVHL--------------LRDDFRAEPKDTRVASGETALLE 182 (633)
Q Consensus 126 ~i~~v~~~d~G~Y~C~~~n~---------~g~~s~~~~l~V~~--------------~~p~~~~~~~~~~~~~g~~~~l~ 182 (633)
.|.+++.+|+|.|.|.+.+. .........|.|.. +++.+...+. ..+.+|++++|.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~ 160 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLT 160 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEE
Confidence 99999999999999999886 22234455677766 2245555555 888999999999
Q ss_pred EeCCCCCC-CCeEEEEEC
Q psy15127 183 CGPPKGQP-EPTLHWKKN 199 (633)
Q Consensus 183 C~~~~~~p-~~~i~W~~~ 199 (633)
|.+....+ .+.+.|+|.
T Consensus 161 C~~~~~~~~~~~v~W~r~ 178 (280)
T 3fku_X 161 CTGNSNNVGNQGAAWLQQ 178 (280)
T ss_dssp EECCCCCCCTTCCEEEEE
T ss_pred EEecCCCCCCceEEEEEE
Confidence 99543244 479999873
No 283
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.60 E-value=1.2e-14 Score=149.16 Aligned_cols=219 Identities=15% Similarity=0.163 Sum_probs=139.1
Q ss_pred cccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCC---
Q psy15127 363 DLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGG--- 439 (633)
Q Consensus 363 ~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~--- 439 (633)
.+.....|.++..|.| .+.+..+....+. + ......++|. +.+. ....+|.|+|. |.... +
T Consensus 71 ~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~--~---------~~~~~~~pP~-v~~~-~~~~si~v~w~-P~~~~-g~~~ 134 (414)
T 3se4_A 71 KLNVYEEIKLRIRAEK-ENTSSWYEVDSFT--P---------FRKAQIGPPE-VHLE-AEDKAIVIHIS-PGTKD-SVMW 134 (414)
T ss_dssp CCCTTSCEEEEEEEEE-TTEEEEEECCCBC--H---------HHHCCCCCCE-EEEE-ECSSCEEEEEE-CSSSS-CTTT
T ss_pred cccCCCcEEEEEEEee-CCcCCCEecCcee--e---------cccceeCCCe-EEEE-EcCCEEEEEEE-cCCCC-Ccee
Confidence 4567778999999999 4433221111110 0 0011123453 4433 34568999999 54221 1
Q ss_pred --CcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEec--cccCCCCCCCCceeecCCCCCCCc
Q psy15127 440 --VAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENS--HGLGIPSPVSPITRTLGLNSLVPQ 515 (633)
Q Consensus 440 --~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~--~G~g~~s~~~~~~~t~~~~p~~~~ 515 (633)
.+.+.+|.|.|+..+....+. .......++|.+|.|++.|.|+|+|.|. .|.|++|... .+.|.+.+|.++|
T Consensus 135 ~~~~~~~~Y~v~y~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~-~~~t~~~~~~~~P 210 (414)
T 3se4_A 135 ALDGLSFTYSLVIWKNSSGVEER---IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPP 210 (414)
T ss_dssp GGGGSSCEEEEEEEETTTCCEEE---EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCE-EEECCSCCSSCCC
T ss_pred eeecCcEEEEEEEEECCCCceEE---EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccc-ccccccccccCCC
Confidence 146789999999876544332 2345678999999999999999999994 7888888665 4566666555555
Q ss_pred chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCC-Ccccceeeeeecccee
Q psy15127 516 HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIP-TASTAVRITWEKYNMA 594 (633)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~-~~~~~~~~~w~~~~~~ 594 (633)
..+ .+...+ .++.|+|++| . ...+| .++|+.... ....+....|+....-
T Consensus 211 ~~v---------------~~~~~~-~~~~l~W~pp--------~----~~~~Y-~v~y~~~~~~~~~~~~~~~w~~~~~~ 261 (414)
T 3se4_A 211 ENI---------------EVSVQN-QNYVLKWDYT--------Y----ANMTF-QVQWLHAFLKRNPGNHLYKWKQIPDC 261 (414)
T ss_dssp EEE---------------EEEEET-TEEEEEEECS--------S----SSCEE-EEEEEESGGGSCCCC--CCCCBCSTT
T ss_pred Ccc---------------EEEEec-CCeEEEECCC--------C----CCeEE-EEEEEehhccccccccccCceECCCc
Confidence 432 555554 6799999943 1 23499 999987410 0000001247643100
Q ss_pred EeecCCccceEEee-ccccceeEEEEEeccccccccccCC
Q psy15127 595 TVMNAATTTSYTVT-HLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 595 ~~~~~~~~~~~~i~-~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.....+.+.|+ +|.+++.|.|+|+|.|..|.|++|+
T Consensus 262 ---~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~ 298 (414)
T 3se4_A 262 ---ENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSE 298 (414)
T ss_dssp ---TTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECC
T ss_pred ---cCCCCCEEcCCcccccCccEEEEEEEecCCCcccccc
Confidence 11235677776 6999999999999999999999874
No 284
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.60 E-value=4.4e-15 Score=145.22 Aligned_cols=178 Identities=13% Similarity=0.117 Sum_probs=111.4
Q ss_pred CCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEE--EEeeeeceEEE--ecCCCCCeEEEEE
Q psy15127 411 GPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVA--AHRITSTSITV--SDLKPDTSYMFIV 486 (633)
Q Consensus 411 ~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~i--~~L~p~~~Y~~~v 486 (633)
.+|.++.+... ...+.|+|+++... +..+. |.|+|+..+ ...|... +.....+.+.| .+|.+++.|.|||
T Consensus 5 ~~P~nv~~~~~-n~~~iL~W~pp~~~---~~~v~-Y~V~y~~~~-~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV 78 (306)
T 3s98_A 5 KSPQKVEVDII-DDNFILRWNRSDES---VGNVT-FSFDYQKTG-MDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRI 78 (306)
T ss_dssp ---CCCEEEEE-TTEEEEECC-----------CE-EEEEEEESS-CSSCEECTTCSSBSSSEEECCC---CTTSCEEEEE
T ss_pred CCCcEeEEEEE-CCeEEEEEcCCCCC---CCCeE-EEEEEEECC-CCCcEECCCccCCCCCEEEccccccCCCCcEEEEE
Confidence 46888888766 45578999999843 35565 999999864 3567642 22333445555 4578999999999
Q ss_pred EEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCccccc---chhh
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLL---DEAR 563 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~---~~~~ 563 (633)
+|.| .|.|+++... .+.+....+..||.+ ++.... ++|.|+|+|| .+.. ...|
T Consensus 79 ~A~n-~~~S~~s~~~-~f~~~~~~~~~pP~v----------------~~~~~~-~si~v~w~P~-----~~~~~~~~~~g 134 (306)
T 3s98_A 79 RAEK-ENTSSWYEVD-SFTPFRKAQIGPPEV----------------HLEAED-KAIVIHISPG-----TKDSVMWALDG 134 (306)
T ss_dssp EEEC-SSCEEEEECC-CBCHHHHCBCCCCEE----------------EEEECS-SCEEEEEECC--------CCCC----
T ss_pred EEEe-CCcCCCEeee-eEechhhCccCCCeE----------------EEEEcC-CEEEEEEECC-----CCCCcceeccC
Confidence 9999 8888776443 344433333333333 555444 6899999933 2111 1257
Q ss_pred hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccc--cccccccCC
Q psy15127 564 ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFF--KTVEGARLD 633 (633)
Q Consensus 564 ~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n--~~g~g~~s~ 633 (633)
.+.+| .|.|++.+... +|. +. ...+.++|.+|+|++.|.|+|+|.| ..|.|++|+
T Consensus 135 ~~l~Y-~v~y~~~~~~~------~~~------~~--~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~ 191 (306)
T 3s98_A 135 LSFTY-SLVIWKNSSGV------EER------IE--NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSP 191 (306)
T ss_dssp -CCEE-EEEEEETTTCC------CEE------EE--EECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCC
T ss_pred CcEEE-EEEEEECCCCC------eEE------Ee--cccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCC
Confidence 89999 99998876543 132 11 2367899999999999999999999 789999885
No 285
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=132.22 Aligned_cols=173 Identities=13% Similarity=0.128 Sum_probs=122.5
Q ss_pred CCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEec
Q psy15127 412 PPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENS 491 (633)
Q Consensus 412 ~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~ 491 (633)
+|.++.....+. ...|.|.+|...+ +.+ .|.|+|+.. ..|......+..+.+.|.+|.++..|.++|+|.|+
T Consensus 4 ~P~nv~~~s~n~-~~iL~W~pp~~~~---~~v-~Y~V~y~~~---~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~ 75 (201)
T 3lqm_A 4 PPENVRMNSVNF-KNILQWESPAFAK---GQL-TFTAQYLSY---RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFA 75 (201)
T ss_dssp CCEEEEEEEETT-EEEEEEECCCCSS---SCC-EEEEEEEET---TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEET
T ss_pred CCcccEEEEECC-ceEEEECCCCCCC---CCe-EEEEEEEEC---CCcccCcCccCCCEEECCCCccCCCEEEEEEEecC
Confidence 467776665554 4679999998642 344 599999975 35887777777889999999999999999999999
Q ss_pred cccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhh--------
Q psy15127 492 HGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEAR-------- 563 (633)
Q Consensus 492 ~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~-------- 563 (633)
.|.|.++.. .+.......+. ||.+ ++. ...++|.|.|.+| ... .+|
T Consensus 76 ~~~S~~s~~-~f~~~~~t~~~-PP~v----------------~~~-~~~~si~v~w~~P------~~~-~~~~~~~~~~~ 129 (201)
T 3lqm_A 76 DEHSDWVQI-TFSPVDDTIIG-PPGM----------------QVE-VLADCLHMRFLAP------KIE-NEYETWTMKNV 129 (201)
T ss_dssp TEECCCEEE-EECHHHHSBCC-CCEE----------------EEE-EETTEEEEEEECC------EEE-CSSCEEEHHHH
T ss_pred CCcCcceee-eeeecccCeeC-CCEE----------------EEE-EeCCEEEEEEcCC------Ccc-CCCcccCHHHh
Confidence 998887642 12111112222 2333 443 3468999999965 111 123
Q ss_pred -hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccc--ccccccCC
Q psy15127 564 -ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFK--TVEGARLD 633 (633)
Q Consensus 564 -~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~--~g~g~~s~ 633 (633)
.+..| .|.|.+.+... .+ .+ ......++|.+|+|++.|.|+|+|.+. .|.|.+|+
T Consensus 130 ~~~l~Y-~v~y~~~~~~~------~~------~~--~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~ 187 (201)
T 3lqm_A 130 YNSWTY-NVQYWKQGTDE------KF------QI--TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSE 187 (201)
T ss_dssp CTTCEE-EEEEEETTCCC------CE------EE--CCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCC
T ss_pred CCceEE-EEEEEECCCCc------EE------EE--EecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCC
Confidence 37899 88888765443 01 11 234678999999999999999999996 68888874
No 286
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.60 E-value=1.9e-15 Score=155.07 Aligned_cols=218 Identities=14% Similarity=0.090 Sum_probs=86.6
Q ss_pred ceEEecccccCCEEEEEEEEcC--CcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCC
Q psy15127 358 RRIACDLRETDSGLYTCTASSE--SGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEP 435 (633)
Q Consensus 358 ~~~i~~~~~~d~g~y~c~a~n~--~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~ 435 (633)
.+.|.+|.....|.++..|.|. .|....+....+..... ..+.+|.++.+...+ .++.|.|.++.
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~-----------~~~~~P~~v~~~~~~-~~~~l~W~pp~- 230 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE-----------NELPPPENIEVSVQN-QNYVLKWDYTY- 230 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSC-----------CSSCCCEEEEEEEET-TEEEEEEECSS-
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccc-----------cccCCCCccEEEEec-CCeEEEECCCC-
Confidence 3466788888899999999994 45443332222322211 123456666665554 67999999975
Q ss_pred CCCCCcceeEEEEEEEEe-------cCCCCeEEE--EEeeeeceEEEe-cCCCCCeEEEEEEEEeccccCCCCCCCCcee
Q psy15127 436 RGGGVAPVIGYTVEYFSS-------DLQTGWVVA--AHRITSTSITVS-DLKPDTSYMFIVRAENSHGLGIPSPVSPITR 505 (633)
Q Consensus 436 ~~~~~~~i~~Y~v~~~~~-------~~~~~~~~~--~~~~~~~~~~i~-~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~ 505 (633)
...+|.|+|+.. +....|... ........+.|. +|.+++.|.|+|+|.|..|.|+++... .+.
T Consensus 231 ------~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~-~~~ 303 (414)
T 3se4_A 231 ------ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEI-KFD 303 (414)
T ss_dssp ------SSCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCE-EEE
T ss_pred ------CCeEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccc-ccc
Confidence 234999999973 123455432 112335667776 699999999999999999999988665 466
Q ss_pred ecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccc----hhhhhcceeEEEEEEcCCCcc
Q psy15127 506 TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLD----EARARLGTKVVNLRELIPTAS 581 (633)
Q Consensus 506 t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~----~~~~i~~y~~i~~~~~~~~~~ 581 (633)
+....+..||.+ ++... .+++.|.|.+| .... ..+.+.+| .|.|.+.+...
T Consensus 304 t~~~~~~~pP~l----------------~~~~~-~~si~v~W~~P------~~~~~~~~~~~~~~~Y-~v~y~~~~~~~- 358 (414)
T 3se4_A 304 TEIQAFLLPPVF----------------NIRSL-SDSFHIYIGAP------KQSGNTPVIQDYPLIY-EIIFWENTSNA- 358 (414)
T ss_dssp TTCC----------------------------------------------------------------------------
T ss_pred chhccccCCCeE----------------EEEEC-CCeEEEEEECC------CCccccchhhcCCeEE-EEEEEECCCCc-
Confidence 666644444444 45433 57999999965 1111 12468899 88887654432
Q ss_pred cceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccc----ccccccCC
Q psy15127 582 TAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFK----TVEGARLD 633 (633)
Q Consensus 582 ~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~----~g~g~~s~ 633 (633)
.+. + ....+.++|.+|+|++.|.|+|+|.+. .|.|++|+
T Consensus 359 -----~~~------~--~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~ 401 (414)
T 3se4_A 359 -----ERK------I--IEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSD 401 (414)
T ss_dssp --------------------------------------------------------
T ss_pred -----eEE------E--EecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCC
Confidence 111 1 135678999999999999999999993 58998874
No 287
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.60 E-value=2.1e-15 Score=143.04 Aligned_cols=133 Identities=20% Similarity=0.285 Sum_probs=93.5
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC--------------CccC-----CCCCeEEcc----cceEEEc
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD--------------DGKM-----PTGRAKILD----DRSLQIE 128 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--------------~~~i-----~~~~~~~~~----~~~L~i~ 128 (633)
+.++..|..+.+.+|++++|.| ..+.+.+.+.|+|. +..+ ..+++.... +.+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4567778889999999999999 66778889999982 1111 114444433 2389999
Q ss_pred cCCCCCCeEEEEEEEeC----CceEEEEEEEEEEe-----eccccc-cCCCceEEecCCcEEEEEeCCCCCCCC-eEEEE
Q psy15127 129 NVGPQDEGLYICDVENL----VGSISLRASLTVHL-----LRDDFR-AEPKDTRVASGETALLECGPPKGQPEP-TLHWK 197 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~----~g~~s~~~~l~V~~-----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~ 197 (633)
+++.+|+|.|.|.+.+. .......+.|.|.. .+|.+. ..+....+.+|+.++|.|.+....|.+ .+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 99999999999999853 22344556777774 123332 334444456799999999953336655 89999
Q ss_pred ECCEEecc
Q psy15127 198 KNGQFIDL 205 (633)
Q Consensus 198 ~~~~~~~~ 205 (633)
++|..+..
T Consensus 162 ~~g~~l~~ 169 (245)
T 4ei6_B 162 VNGKEVHS 169 (245)
T ss_dssp ETTEEECT
T ss_pred ECCEECCC
Confidence 99987753
No 288
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.59 E-value=1.7e-15 Score=140.57 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=67.3
Q ss_pred eeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCCc--c---C--------------CCCCeEEcc---cceEEEccC
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDDG--K---M--------------PTGRAKILD---DRSLQIENV 130 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~~--~---i--------------~~~~~~~~~---~~~L~i~~v 130 (633)
+..|..+.+.+|++++|.|.+.+. +.+.+.|+|... . + ..+++.... +..|.|.++
T Consensus 3 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (215)
T 3nl4_H 3 VEESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSP 82 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSC
T ss_pred eEcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCC
Confidence 345677889999999999999763 356899998431 1 0 012333322 235999999
Q ss_pred CCCCCeEEEEEEEeCCce----EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEe
Q psy15127 131 GPQDEGLYICDVENLVGS----ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECG 184 (633)
Q Consensus 131 ~~~d~G~Y~C~~~n~~g~----~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~ 184 (633)
+.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.++|.|.
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~ 143 (215)
T 3nl4_H 83 TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCL 143 (215)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEE
T ss_pred CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEE
Confidence 999999999999987542 333455666521 133222222223334555555555
No 289
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.59 E-value=5.4e-15 Score=135.60 Aligned_cols=108 Identities=12% Similarity=0.110 Sum_probs=87.6
Q ss_pred ceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCCC
Q psy15127 48 SVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPT 114 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~ 114 (633)
++|.|.+++. +|.|+|.+.| +..+|.+...+. ..+.+|+.++|.|.+.+. |.+.+.|+|+|..+..
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~ 132 (204)
T 3sgj_C 54 SSYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY 132 (204)
T ss_dssp SEEEESSCCGGGCEEEEEEETTSBCCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE
T ss_pred cEEEEecccccCCEEEEEEeCCCcccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec
Confidence 7899999998 9999999987 445566655554 678999999999999655 5678999999987532
Q ss_pred CCeEEcccceEEEccCCCCCCeEEEEEEEeCC-ceEEEEEEEEEEee
Q psy15127 115 GRAKILDDRSLQIENVGPQDEGLYICDVENLV-GSISLRASLTVHLL 160 (633)
Q Consensus 115 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~-g~~s~~~~l~V~~~ 160 (633)
...++.|.|.+++.+|+|.|+|.|.|.. +..+..+.|.|.++
T Consensus 133 ----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 133 ----FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp ----EEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ----ccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 2235689999999999999999999954 44677888888876
No 290
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.59 E-value=8.2e-15 Score=135.51 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=92.2
Q ss_pred EeeCceEEEc-----CCCC--CCeEEEEEEe-------------cC-cCCeeeeCCCceEEEcCCeEEEEEEE-eccCCC
Q psy15127 44 SIFGSVLGAR-----GALS--DDQWKLIAKE-------------AL-IKPFPISEPSDATVLSGSVVEFVCRV-GGDPLP 101 (633)
Q Consensus 44 ~~~~~~L~i~-----~v~~--~G~Y~C~a~~-------------v~-~~p~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p 101 (633)
...++.+.+. +++. +|.|+|.|.+ +. .++.+...+....+.+|+.++|.|.+ .+.|.+
T Consensus 63 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 142 (212)
T 2v9r_A 63 LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP 142 (212)
T ss_dssp ECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCC
T ss_pred EecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCC
Confidence 3445555544 4455 9999999988 22 23445566777889999999999998 889999
Q ss_pred eEEEEeCCccCCCC-CeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEE-EEEEEEEeeccccccCC
Q psy15127 102 TILWRRDDGKMPTG-RAKILDDRSLQIENVGPQDEGLYICDVENLVGSISL-RASLTVHLLRDDFRAEP 168 (633)
Q Consensus 102 ~i~W~~~~~~i~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~-~~~l~V~~~~p~~~~~~ 168 (633)
.+.|++++..+... ......++.|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+ |.+...|
T Consensus 143 ~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~-P~~~~~P 210 (212)
T 2v9r_A 143 TISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLER-PSFVKAA 210 (212)
T ss_dssp EEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---------
T ss_pred EEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeC-chHhhhc
Confidence 99999999988643 344456779999999999999999999999998654 489999987 7665554
No 291
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.59 E-value=4e-14 Score=135.03 Aligned_cols=187 Identities=17% Similarity=0.150 Sum_probs=93.4
Q ss_pred CCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCC-----CCeEEEEECC--EE
Q psy15127 130 VGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQP-----EPTLHWKKNG--QF 202 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-----~~~i~W~~~~--~~ 202 (633)
++.+|+|.|+|.|. |.....+.+.+..+ +.+...|....+.+|++++|.|. ..+.| .+.+.|+|++ ..
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~-~~~~~~p~~~~v~~G~~v~L~C~-~~~~~~~~~~~~~v~W~k~~~g~~ 85 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRE-LVMTQSPLTLSVTIGQPASISCK-SSQSLLYSNGKTYLNWLLQRPGQS 85 (254)
T ss_dssp ------------------------------C-CCEEEECSEEEECTTSCEEEEEE-ESSCCBCSSSCBCEEEEEECTTSC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeec-eeEEeCCceEEecCCCcEEEEee-ccCcccccCCCCceEEEEeCCCCC
Confidence 68899999999998 44444444444444 66777788889999999999999 46666 4899999842 21
Q ss_pred ec----------cC--CCeeEEec--cceeeeEEE----eeeEEEEeecCCCCC----Ccccccc---cceeEEe-----
Q psy15127 203 ID----------LE--SSKSLDLS--RRTLGWLRV----RPLYWNVARPRANLN----PRYIGRK---MASLLIW----- 252 (633)
Q Consensus 203 ~~----------~~--~~~~~~~~--~~~~~~~~~----~g~y~C~a~~~~~~~----p~~~~~~---~~~~~~~----- 252 (633)
+. .. .+...... ...|.+..+ .|.|+|.+.+..+.. ..+.... .+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~ 165 (254)
T 2c1o_A 86 PKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSE 165 (254)
T ss_dssp CEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHH
T ss_pred ceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChh
Confidence 11 00 11111111 112222222 489999998875321 0111110 1111111
Q ss_pred -cCCceEEEEEEEeeecC--CeeEEEECCEEEEec-cC------CccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCc
Q psy15127 253 -NHPRVNRLSCFAEGSPL--PSVFWTQEGSQVLMF-PG------NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG 322 (633)
Q Consensus 253 -~~g~~~~l~C~~~g~p~--~~v~W~~~g~~~~~~-~~------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 322 (633)
..|+.++|.|.+.|.++ +.+.|+++|..+... .. .....+ ...+.|.|.++..+|+|.|+|.|.|...
T Consensus 166 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 166 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY--SMSSTLTLTKDEYERHNSYTCEATHKTS 243 (254)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCE--EEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcE--EEEEEEEeccccccCCCeEEEEEEcCCC
Confidence 13679999999998544 369999999876421 00 000000 1123678888888888888888888765
Q ss_pred e
Q psy15127 323 S 323 (633)
Q Consensus 323 ~ 323 (633)
.
T Consensus 244 ~ 244 (254)
T 2c1o_A 244 T 244 (254)
T ss_dssp S
T ss_pred C
Confidence 4
No 292
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.59 E-value=3.1e-15 Score=141.88 Aligned_cols=133 Identities=22% Similarity=0.305 Sum_probs=92.0
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC---------------CCCCeEEcc----cceEEEccCC
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM---------------PTGRAKILD----DRSLQIENVG 131 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i---------------~~~~~~~~~----~~~L~i~~v~ 131 (633)
.+...|..+.+.+|++++|.|.+.+.+.+.+.|+|.. ... ..+++.... +.+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 3556678889999999999999998889999999932 110 012333332 3479999999
Q ss_pred CCCCeEEEEEEEeCCc------eEEEEEEEEEEee-----ccccc-cCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEE
Q psy15127 132 PQDEGLYICDVENLVG------SISLRASLTVHLL-----RDDFR-AEPKDTRVASGETALLECGPPKGQPEP-TLHWKK 198 (633)
Q Consensus 132 ~~d~G~Y~C~~~n~~g------~~s~~~~l~V~~~-----~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~ 198 (633)
.+|+|.|.|.+.+..| .....+.|.|... +|.+. ..+....+..|+.+.|.|.+....|.+ .+.|++
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 9999999999998322 2334456777752 13332 222233345599999999953335555 899999
Q ss_pred CCEEecc
Q psy15127 199 NGQFIDL 205 (633)
Q Consensus 199 ~~~~~~~ 205 (633)
+|..+..
T Consensus 163 ~g~~l~~ 169 (245)
T 3nfj_J 163 NGKEVHS 169 (245)
T ss_dssp TTEEECT
T ss_pred CCEECCC
Confidence 9987753
No 293
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.59 E-value=9.7e-14 Score=135.03 Aligned_cols=113 Identities=16% Similarity=0.100 Sum_probs=74.9
Q ss_pred CCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEe-eCCeEEEEeCCCCCCCCCCcc----
Q psy15127 368 DSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNT-TRGSVTLGWGEPEPRGGGVAP---- 442 (633)
Q Consensus 368 d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~-~~~~i~l~W~~~~~~~~~~~~---- 442 (633)
..+.++|.|.|..|..+....+.+... +.|.||.++.+... ....+.|+|++|... +.+
T Consensus 184 ~~y~~~V~A~n~lg~~s~~~~f~~~~i-------------VkPdPP~~l~~~~~~~~~~l~vsW~~P~~~---~~p~~~~ 247 (306)
T 3d85_D 184 LPIEVMVDAVHKLKYEQYTSSFFIRDI-------------IKPDPPKNLQLKPLKNSRQVEVSWEYPDTW---STPHSYF 247 (306)
T ss_dssp SCEEEEEEEEETTEEEEEEEEECHHHH-------------BCCCCCEEEEEEEC----CEEEEEECCTTS---CSCTTTS
T ss_pred EEEEEEEEEEccCCccccceEEEehhc-------------EecCCCceEEEEEecCCCcEEEEEcCCCCC---cCCCcee
Confidence 457788999999997665544443321 22456777777664 347999999998742 233
Q ss_pred eeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCC
Q psy15127 443 VIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVS 501 (633)
Q Consensus 443 i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 501 (633)
.+.|.|+|+..+....|.. .....+++.| .+++.|.|+|+|.|..|.|.+|.++
T Consensus 248 ~L~Y~vryr~~~~~~~~~~--~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 248 SLTFCVQVQGKSKREKKDR--VFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp CEEEEEEEECC------CE--EEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred eEEEEEEEEECCCCccEEE--eeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCC
Confidence 3789999998764333332 2234456666 4699999999999999999999886
No 294
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.59 E-value=2.7e-15 Score=142.94 Aligned_cols=126 Identities=20% Similarity=0.328 Sum_probs=83.3
Q ss_pred eCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCCc--c---C---------------CCCCeEEccc-----ceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDDG--K---M---------------PTGRAKILDD-----RSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~~--~---i---------------~~~~~~~~~~-----~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+. +...+.|+|... . + ..+|+....+ .+|+|.
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMS 84 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEEC
T ss_pred EcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEEC
Confidence 44667889999999999999763 356799998431 1 0 1134444322 359999
Q ss_pred cCCCCCCeEEEEEEEeC----CceEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECC
Q psy15127 129 NVGPQDEGLYICDVENL----VGSISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNG 200 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~----~g~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~ 200 (633)
+++.+|+|.|.|.+.+. .......+.|.|.. .+|.+...+....+..|+.+.|.|.+....|.+ .+.|++++
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~ 164 (253)
T 3liz_H 85 SLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (253)
T ss_dssp SCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCC
Confidence 99999999999999876 23334445677762 224444333334566799999999954447766 89999887
Q ss_pred E
Q psy15127 201 Q 201 (633)
Q Consensus 201 ~ 201 (633)
.
T Consensus 165 ~ 165 (253)
T 3liz_H 165 L 165 (253)
T ss_dssp B
T ss_pred e
Confidence 5
No 295
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=135.34 Aligned_cols=109 Identities=19% Similarity=0.271 Sum_probs=93.0
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------cCc---------------CCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------ALI---------------KPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v~~---------------~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
++.|.|.+++. +|.|+|.+.+ +.. +|.+...+....+.+|+.+.|.|.+.
T Consensus 64 ~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~ 143 (218)
T 3k0w_A 64 TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAV 143 (218)
T ss_dssp SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEE
T ss_pred CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEec
Confidence 46899999998 9999999998 111 16777888888999999999999999
Q ss_pred ccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee
Q psy15127 97 GDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 97 ~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~ 160 (633)
+.|.+.++|++++..+.... ...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...
T Consensus 144 g~p~~~v~W~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 144 GSPIPHYQWFKNELPLTHET-----KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp BSSCCEEEEEETTEECTTCC-----SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred ccCCCeEEEEECCEECCCCC-----CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 99999999999999886542 358999999999999999999998887 677778888764
No 296
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.58 E-value=5.3e-16 Score=146.03 Aligned_cols=167 Identities=16% Similarity=0.156 Sum_probs=89.3
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC-------------CCCCeEEc---ccceEEEccCCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM-------------PTGRAKIL---DDRSLQIENVGP 132 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i-------------~~~~~~~~---~~~~L~i~~v~~ 132 (633)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|+|++. .+ ..+++... .+.+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 4556666888899999999999999888778899998542 11 01222222 223799999999
Q ss_pred CCCeEEEEEEEeCCce-EEEEEEEEEEee--ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEEeccCCC
Q psy15127 133 QDEGLYICDVENLVGS-ISLRASLTVHLL--RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQFIDLESS 208 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~ 208 (633)
+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.++|.|.+....|.+ .+.|+++|..+.....
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 182 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 182 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEE
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCce
Confidence 9999999999887553 223345666542 25554433333344799999999954335554 8999999987754300
Q ss_pred eeE--E-ecc------ceeeeEEE----eeeEEEEeecCCCC
Q psy15127 209 KSL--D-LSR------RTLGWLRV----RPLYWNVARPRANL 237 (633)
Q Consensus 209 ~~~--~-~~~------~~~~~~~~----~g~y~C~a~~~~~~ 237 (633)
... . ..+ ..+.+... .|.|+|.|.|....
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 183 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 000 0 011 11222222 48999999997654
No 297
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.58 E-value=4.7e-15 Score=140.20 Aligned_cols=132 Identities=17% Similarity=0.251 Sum_probs=91.1
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--------------cC----CCCCeEEcc----cceEEEcc
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--------------KM----PTGRAKILD----DRSLQIEN 129 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--------------~i----~~~~~~~~~----~~~L~i~~ 129 (633)
+.+...|..+.+.+|++++|.|.+.+ +.+.+.|+|... .. ..+++.... +.+|.|.+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 34566778889999999999999875 778999999321 10 013444332 34799999
Q ss_pred CCCCCCeEEEEEEEeC---CceEEEEEEEEEEe-----eccccc-cCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 130 VGPQDEGLYICDVENL---VGSISLRASLTVHL-----LRDDFR-AEPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~---~g~~s~~~~l~V~~-----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
++.+|+|.|.|.+.+. .......+.|.|.. .+|.+. ..+....+..|+.+.|.|.+....|.+ .+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 9999999999999732 22234455677764 123333 233444456799999999954436666 8899999
Q ss_pred CEEec
Q psy15127 200 GQFID 204 (633)
Q Consensus 200 ~~~~~ 204 (633)
|..+.
T Consensus 162 g~~l~ 166 (240)
T 3q5y_A 162 GKEVH 166 (240)
T ss_dssp TEEEC
T ss_pred CEECc
Confidence 88775
No 298
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.58 E-value=8.9e-15 Score=135.24 Aligned_cols=151 Identities=16% Similarity=0.197 Sum_probs=105.7
Q ss_pred cCCCCCCCCCCccccccceeeEEEE----ecc-cCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe------------
Q psy15127 7 TNHAHPMSSPRAEIEPATRTNRVSI----SGD-PGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE------------ 67 (633)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~------------ 67 (633)
+.|... +.|.+.|.|+........ ++. ......|+.+. ++.|.|.+++. +|.|+|.|.+
T Consensus 21 L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~ 98 (212)
T 1f97_A 21 LTCTYS-GFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIH 98 (212)
T ss_dssp EECEEE-SCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEE
T ss_pred EEeEeC-CCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEEEEEEccCCCcccEEEEE
Confidence 344333 347778886654332110 000 01223455444 48999999998 9999999987
Q ss_pred --cCcCCeeeeCCCceEEEcCCeEEEEEE-EeccCCCeEEEEeCCc-cCCCCC----------eEE-cccceEEEccCCC
Q psy15127 68 --ALIKPFPISEPSDATVLSGSVVEFVCR-VGGDPLPTILWRRDDG-KMPTGR----------AKI-LDDRSLQIENVGP 132 (633)
Q Consensus 68 --v~~~p~~~~~~~~~~~~~G~~~~L~C~-~~~~p~p~i~W~~~~~-~i~~~~----------~~~-~~~~~L~i~~v~~ 132 (633)
+..+|.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.... ... ...+.|.|.+++.
T Consensus 99 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 178 (212)
T 1f97_A 99 LTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTA 178 (212)
T ss_dssp EEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCG
T ss_pred EEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecCh
Confidence 344555544445567899999999999 6889999999999999 876432 122 2357899999999
Q ss_pred CCCeEEEEEEEeCCceE--EEEEEEEEEe
Q psy15127 133 QDEGLYICDVENLVGSI--SLRASLTVHL 159 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g~~--s~~~~l~V~~ 159 (633)
+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 179 ~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 179 FDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp GGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred hhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99999999999999987 5566666654
No 299
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.58 E-value=2.6e-15 Score=142.65 Aligned_cols=127 Identities=22% Similarity=0.326 Sum_probs=80.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i~ 128 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... +..|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (257)
T 3bn9_D 5 VQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMS 84 (257)
T ss_dssp EEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEE
T ss_pred EccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEEC
Confidence 445677899999999999998765 5789999853 111 023444332 2479999
Q ss_pred cCCCCCCeEEEEEEEeCCc-------------eEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCCCC
Q psy15127 129 NVGPQDEGLYICDVENLVG-------------SISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQPEP 192 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g-------------~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 192 (633)
+++.+|+|.|.|.+.+..| .....+.|.|.. .+|.+...+....+.+|+.++|.|.+....|.+
T Consensus 85 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~p 164 (257)
T 3bn9_D 85 SLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 164 (257)
T ss_dssp SCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSC
T ss_pred CCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCC
Confidence 9999999999999998754 112345778875 124444333233467899999999954445776
Q ss_pred -eEEEEECCEE
Q psy15127 193 -TLHWKKNGQF 202 (633)
Q Consensus 193 -~i~W~~~~~~ 202 (633)
.|.|++++..
T Consensus 165 i~v~W~k~g~~ 175 (257)
T 3bn9_D 165 VTVSWNSGALT 175 (257)
T ss_dssp CEEEETTTTCC
T ss_pred cEEEEeeCCCc
Confidence 9999998764
No 300
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.9e-14 Score=118.36 Aligned_cols=91 Identities=26% Similarity=0.287 Sum_probs=80.5
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc----cceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD----DRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+..+.+.+|+.++|.|.+.|.|.|.++|+|++..+......... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 4788988999999999999999999999999999999999988755333322 468999999999999999999999
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
.|..+..+.|.|...
T Consensus 86 ~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDK 100 (114)
T ss_dssp SCEEECCEEEEEECS
T ss_pred CCcEEEEEEEEEECC
Confidence 999999999999876
No 301
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.58 E-value=1.1e-14 Score=130.18 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=86.6
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCC-CeEEEEeCCccC
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPL-PTILWRRDDGKM 112 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~-p~i~W~~~~~~i 112 (633)
.++.|.|.+++. +|.|+|.+.| +..++.+... ....+.+|+.++|.|.+.+.+. +.+.|+|+|..+
T Consensus 52 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~ 130 (175)
T 1fnl_A 52 QASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDR 130 (175)
T ss_dssp SCSEEEESSCCGGGCEEEEEECSSSCCCCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEE
T ss_pred CceEEEEeCCCcccCEEEEEEeeCCcccccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEc
Confidence 357899999998 9999999987 3334444433 4567899999999999987755 499999999876
Q ss_pred CCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEe
Q psy15127 113 PTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHL 159 (633)
Q Consensus 113 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~ 159 (633)
.. ......|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.+
T Consensus 131 ~~----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 131 KY----FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EE----EEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cC----CCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 32 224578999999999999999999997665 56677777765
No 302
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.58 E-value=1.1e-14 Score=135.38 Aligned_cols=109 Identities=29% Similarity=0.463 Sum_probs=88.7
Q ss_pred EEcCCCC--CCeEEEEEEe-------------cC-cCCeeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeCCccCC
Q psy15127 51 GARGALS--DDQWKLIAKE-------------AL-IKPFPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRDDGKMP 113 (633)
Q Consensus 51 ~i~~v~~--~G~Y~C~a~~-------------v~-~~p~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~~i~ 113 (633)
.|.+++. +|.|+|.+.| +. .+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+|++..+.
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred EeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 5777777 9999999998 22 24566667778889999999999999 889999999999998875
Q ss_pred C---------CCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 114 T---------GRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 114 ~---------~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
. .+.....++.|.|.+++.+|+|.|+|.|.|..|.....+.+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 152 DLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp CCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 2 334445567899999999999999999999999876665555544
No 303
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.58 E-value=2.5e-15 Score=134.28 Aligned_cols=139 Identities=11% Similarity=0.020 Sum_probs=96.1
Q ss_pred CCCCCCccccccceeeEEEE-e-c-ccCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEecCcC--------CeeeeCC
Q psy15127 12 PMSSPRAEIEPATRTNRVSI-S-G-DPGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKEALIK--------PFPISEP 78 (633)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~v~~~--------p~~~~~~ 78 (633)
....|.+.|+|+........ . + .......|+.+..+++|.|.+++. +|.|+|.|.|.... ..+...+
T Consensus 22 ~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~ 101 (176)
T 1hng_A 22 QMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMV 101 (176)
T ss_dssp CCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCC
T ss_pred CcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCC
Confidence 33456678897664432211 0 1 112345788888889999999998 99999999982111 1111122
Q ss_pred C-ceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy15127 79 S-DATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTV 157 (633)
Q Consensus 79 ~-~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V 157 (633)
. ......+..++|.|.+.+.|.|.|+|+|+|..+..+ ..+.|.+++.+|+|.|+|.|.|..|..+..+.|.+
T Consensus 102 ~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~-------~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 102 SKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSL-------RQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEE-------SSSEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred CCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCC-------CcEEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 2 222334557999999999999999999999876432 23566688899999999999999998777665544
No 304
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.57 E-value=3.1e-15 Score=126.37 Aligned_cols=113 Identities=21% Similarity=0.204 Sum_probs=91.3
Q ss_pred EEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhh
Q psy15127 486 VRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARAR 565 (633)
Q Consensus 486 v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i 565 (633)
|+|.|..|.|++|.....++|.+..|.+|.++ ++..++.+++.|+|++| ...+|.|
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i 58 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGI----------------LFPEVRTTSVRLIWQPP--------AAPNGII 58 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCC----------------EEEEECSSEEEEECCCC--------SCCCSCC
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCce----------------EEEecCCCEEEEEEcCC--------CCCCCce
Confidence 67899999999886433578888888877777 78889999999999965 4567889
Q ss_pred cceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 566 LGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 566 ~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
++| .|+|+..+... ... .........+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 59 ~~Y-~v~~~~~~~~~--------~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 115 (130)
T 1wfo_A 59 LAY-QITHRLNTTTA--------NTA--TVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAE 115 (130)
T ss_dssp CEE-EEEEEESSCCC--------SCC--CEEEECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEE
T ss_pred EEE-EEEEEECCCCC--------ceE--EEEEeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcc
Confidence 999 99999875432 111 1123456789999999999999999999999999999874
No 305
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=136.65 Aligned_cols=116 Identities=26% Similarity=0.414 Sum_probs=91.0
Q ss_pred eeCceEEEcCCCC--CCeEEEEEEe------------cC----cCCeee-eCCCceEEEcCCeEEEEEEEeccCCCeEEE
Q psy15127 45 IFGSVLGARGALS--DDQWKLIAKE------------AL----IKPFPI-SEPSDATVLSGSVVEFVCRVGGDPLPTILW 105 (633)
Q Consensus 45 ~~~~~L~i~~v~~--~G~Y~C~a~~------------v~----~~p~~~-~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W 105 (633)
..+++|.|.+++. +|.|+|.+.+ +. .+|.+. ..+....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 69 ~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W 148 (241)
T 3grw_A 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQW 148 (241)
T ss_dssp GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEE
T ss_pred ccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEE
Confidence 3456899999998 9999999988 21 123333 346677889999999999999999999999
Q ss_pred Ee----CCccCCCCCe--EE----------cccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 106 RR----DDGKMPTGRA--KI----------LDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 106 ~~----~~~~i~~~~~--~~----------~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
++ ++..+..+.. .. .....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 149 LKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp EEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred EEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCC
Confidence 99 7877753321 11 12357999999999999999999999999999999999887
No 306
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.57 E-value=1.3e-14 Score=135.27 Aligned_cols=126 Identities=20% Similarity=0.324 Sum_probs=85.5
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCCc--cC--------------------CCCCeEEccc-----ceEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDDG--KM--------------------PTGRAKILDD-----RSLQ 126 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~~--~i--------------------~~~~~~~~~~-----~~L~ 126 (633)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+|... .. ..+++....+ .+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQ 84 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEE
Confidence 456678899999999999998643 57899998431 10 0134444322 2699
Q ss_pred EccCCCCCCeEEEEEEEeCC--ceEEEEEEEEEEee---ccccc-cCCCceEEecCCcEEEEEeCCCCCCC--CeEEEEE
Q psy15127 127 IENVGPQDEGLYICDVENLV--GSISLRASLTVHLL---RDDFR-AEPKDTRVASGETALLECGPPKGQPE--PTLHWKK 198 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~--g~~s~~~~l~V~~~---~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~ 198 (633)
|.+++.+|+|.|.|.+.+.. ......+.|.|... +|.+. ..+... .+|+.++|.|.+....|. +.+.|++
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~ 162 (221)
T 3m8o_H 85 MNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSE 162 (221)
T ss_dssp ECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESC
T ss_pred ECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEE
Confidence 99999999999999998763 22334456777521 23333 223322 689999999995443776 4899998
Q ss_pred CCEEe
Q psy15127 199 NGQFI 203 (633)
Q Consensus 199 ~~~~~ 203 (633)
+|..+
T Consensus 163 ~g~~~ 167 (221)
T 3m8o_H 163 SGQGV 167 (221)
T ss_dssp CSTTC
T ss_pred CCEEC
Confidence 87644
No 307
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.57 E-value=3e-14 Score=138.59 Aligned_cols=258 Identities=14% Similarity=0.090 Sum_probs=144.9
Q ss_pred CCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEEeCCceeEEEEEEEEE
Q psy15127 254 HPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVR 333 (633)
Q Consensus 254 ~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 333 (633)
.|++++|.|.+...+ .|.|.++|..... ..+++|.|.++...|+|.|+|.+ .|.....+.+.|.
T Consensus 20 ~G~~v~l~C~~~~~~--~i~W~~~~~~~~~-----------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~ 83 (306)
T 3d85_D 20 PGEMVVLTCDTPEED--GITWTLDQSSEVL-----------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLH 83 (306)
T ss_dssp CCEEEEEECSSSCCS--SCEEEETTCCCCC-----------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEE
T ss_pred cCCcEEEECCCCCCC--cCEEEECCccccC-----------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEE
Confidence 689999999987433 8999999974310 24678999999999999999999 3666656665554
Q ss_pred ecccCCCceEEeCCCccccCCCCCceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCC
Q psy15127 334 EFCVLPKGTFTLGQPNLATGNSDLRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPP 413 (633)
Q Consensus 334 ~~~~~p~p~~~~~~~~~~~g~p~~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p 413 (633)
.++ . |.....+. ...+. +|. +
T Consensus 84 ~~~----~---------------------------------------~~~~t~i~---~~~~~------------pp~-~ 104 (306)
T 3d85_D 84 KKE----D---------------------------------------GIWSTDIL---KDQKE------------PKN-K 104 (306)
T ss_dssp EEE----T---------------------------------------TEECCCSS---CCCC---------------C-C
T ss_pred ecc----C---------------------------------------Ccceeeee---cccCC------------CCC-C
Confidence 311 0 00000000 00000 011 3
Q ss_pred CCcEEEEeeCC-eEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEE-eeeece---------EE----EecCCC
Q psy15127 414 AAPVILNTTRG-SVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAH-RITSTS---------IT----VSDLKP 478 (633)
Q Consensus 414 ~~~~~~~~~~~-~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~---------~~----i~~L~p 478 (633)
..+.+...... .+..+|.+.... .....|...+. .....|..-.. ...... +. +..+-|
T Consensus 105 ~~lsC~~~~~~~~~~C~W~pg~~~----~l~~~~~~~r~--~~~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp 178 (306)
T 3d85_D 105 TFLRCEAKNYSGRFTCWWLTTIST----DLTFSVKSSRG--SSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACP 178 (306)
T ss_dssp CCCEEEBSSSSSEEEEEEEESCCS----SEEEEEEEEEC--SSSCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCT
T ss_pred CcceEEcCCcccCcEEEecCCCCC----ceeEEEEEEec--CCCCcceECCCCCCCccceeecCccccceeeeeeccccc
Confidence 34555544433 899999988742 22334543321 11111221000 001111 11 234445
Q ss_pred C----CeEEEEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecc-cceEEEEEEEecCC
Q psy15127 479 D----TSYMFIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTA-STAVRITWEVSWGS 553 (633)
Q Consensus 479 ~----~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~si~v~W~~p~~~ 553 (633)
+ ..|.|+|.|.|+.|....+. .+..+....|.+|.++ ++..+. ...+.|+|++|
T Consensus 179 ~~~~~~~y~~~V~A~n~lg~~s~~~--~f~~~~iVkPdPP~~l----------------~~~~~~~~~~l~vsW~~P--- 237 (306)
T 3d85_D 179 AAEESLPIEVMVDAVHKLKYEQYTS--SFFIRDIIKPDPPKNL----------------QLKPLKNSRQVEVSWEYP--- 237 (306)
T ss_dssp TSCCCSCEEEEEEEEETTEEEEEEE--EECHHHHBCCCCCEEE----------------EEEEC----CEEEEEECC---
T ss_pred cccccEEEEEEEEEEccCCccccce--EEEehhcEecCCCceE----------------EEEEecCCCcEEEEEcCC---
Confidence 5 48999999999999754331 1111223345545444 566543 38999999954
Q ss_pred Ccccccch--hhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccccccccc
Q psy15127 554 VPQHLLDE--ARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 554 ~p~~~~~~--~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
...+. +-....| .|+|+..+... |... .. ...+++.| .+++.|.|+|+|.|..|.|.+
T Consensus 238 ---~~~~~p~~~~~L~Y-~vryr~~~~~~-------~~~~--~~----~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~W 297 (306)
T 3d85_D 238 ---DTWSTPHSYFSLTF-CVQVQGKSKRE-------KKDR--VF----TDKTSATV---ICRKNASISVRAQDRYYSSSW 297 (306)
T ss_dssp ---TTSCSCTTTSCEEE-EEEEECC-------------CE--EE----ESSSEEEE---CCCSSCEEEEEEEESSSCCCC
T ss_pred ---CCCcCCCceeeEEE-EEEEEECCCCc-------cEEE--ee----ccccEEEE---eCCCeEEEEEEeccCCCCCCC
Confidence 21111 1145789 99999776533 4322 11 23466766 469999999999999999999
Q ss_pred CC
Q psy15127 632 LD 633 (633)
Q Consensus 632 s~ 633 (633)
||
T Consensus 298 Se 299 (306)
T 3d85_D 298 SE 299 (306)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 308
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=6.4e-15 Score=136.57 Aligned_cols=127 Identities=20% Similarity=0.290 Sum_probs=87.2
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC-----------------CCCCeEEcc-----cceEEEcc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM-----------------PTGRAKILD-----DRSLQIEN 129 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~-----~~~L~i~~ 129 (633)
.+|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... +..|.|.+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (215)
T 1c5d_H 5 LESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNS 84 (215)
T ss_dssp EEECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESS
T ss_pred EcCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECC
Confidence 346778899999999999998754 4789999863 211 012333332 24899999
Q ss_pred CCCCCCeEEEEEEEeCCce---EEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEECCEE
Q psy15127 130 VGPQDEGLYICDVENLVGS---ISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPEP-TLHWKKNGQF 202 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g~---~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~~~~ 202 (633)
++.+|+|.|.|.+.+..+. ....+.|.|... +|.+...+....+.+|+.+.|.|.+....|.+ .+.|++++..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 164 (215)
T 1c5d_H 85 LQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALS 164 (215)
T ss_dssp CCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTC
T ss_pred CCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCcc
Confidence 9999999999999886421 223457777742 24443322223357899999999954344777 9999988653
No 309
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.56 E-value=6.4e-15 Score=141.81 Aligned_cols=134 Identities=22% Similarity=0.320 Sum_probs=94.0
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC--CccC-----------------CCCCeEEcc----cceEEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD--DGKM-----------------PTGRAKILD----DRSLQI 127 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~--~~~i-----------------~~~~~~~~~----~~~L~i 127 (633)
.+.+...|..+.+.+|++++|.|.+. .+.+.+.|+|. +... ..+++.... +.+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 34566677788999999999999986 57789999992 2211 114444443 457999
Q ss_pred ccCCCCCCeEEEEEEEeC--CceEEEEEEEEEEee-----ccccc-cCCCceEEecCCcEEEEEeCCCCCCCC-eEEEEE
Q psy15127 128 ENVGPQDEGLYICDVENL--VGSISLRASLTVHLL-----RDDFR-AEPKDTRVASGETALLECGPPKGQPEP-TLHWKK 198 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~--~g~~s~~~~l~V~~~-----~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~ 198 (633)
.+++.+|+|.|.|.+.+. .........|.|... +|.+. ..+....+.+|+.++|.|.+....|.+ .+.|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999973 333445566777752 13322 233444455699999999954335545 999999
Q ss_pred CCEEecc
Q psy15127 199 NGQFIDL 205 (633)
Q Consensus 199 ~~~~~~~ 205 (633)
+|..+..
T Consensus 185 ~g~~l~~ 191 (268)
T 3pl6_D 185 NGKEVHS 191 (268)
T ss_dssp SSSEECT
T ss_pred CCEECCC
Confidence 9988854
No 310
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.56 E-value=1.9e-14 Score=128.81 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=86.9
Q ss_pred CceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMP 113 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~ 113 (633)
++.|.|.+++. +|.|+|.+.+ +..++.+.. +....+.+|+.+.|.|.+. +.|.+.+.|+|+|..+.
T Consensus 50 ~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 50 NSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128 (176)
T ss_dssp SSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEEECSSEEEE-ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC
T ss_pred ceEEEEeccceecCEEEEEEcCCccccccEEEEEeCcceeec-CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe
Confidence 57899999998 9999999988 333333333 3446788999999999994 66777999999999874
Q ss_pred CCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee
Q psy15127 114 TGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 114 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~ 160 (633)
.. ..++.|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|..+
T Consensus 129 ~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 129 YW----YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKA 172 (176)
T ss_dssp SC----CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECS
T ss_pred ee----cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecC
Confidence 32 13568999999999999999999997544 566788888876
No 311
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.55 E-value=1.5e-14 Score=147.66 Aligned_cols=202 Identities=15% Similarity=0.136 Sum_probs=138.2
Q ss_pred EEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEE
Q psy15127 370 GLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVE 449 (633)
Q Consensus 370 g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~ 449 (633)
..|.|.... ....+.|.+..+| ++|.++.+.......+.++|.++.+.+.++.+...|.|.
T Consensus 261 ~n~~C~~~~----~~~g~~l~vg~PP---------------~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~ 321 (483)
T 3e0g_A 261 TNVVFTTED----NIFGTVIFAGYPP---------------DTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLV 321 (483)
T ss_dssp EEEEEEESS----CEEEEEEEEECCC---------------CCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEE
T ss_pred ceEEEecCC----cccceEEECcCCC---------------CCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEE
Confidence 458998532 2344567776554 457788888777789999999988653222348899999
Q ss_pred EEEecCCCCeEEEEEe-----eeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCcee-ecCCCCCCCcchHHHHHH
Q psy15127 450 YFSSDLQTGWVVAAHR-----ITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITR-TLGLNSLVPQHLLDEARA 523 (633)
Q Consensus 450 ~~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~-t~~~~p~~~~~~~~~~~~ 523 (633)
|+..+. .. .... .....+.|.+|.+.+.|.|+|.|.|..|.+. +. . .+. +....|.+|.++
T Consensus 322 y~~~g~---~~-~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~-S~-~-~~~~~~~VkP~PP~nl------ 388 (483)
T 3e0g_A 322 ESFSGK---YV-RLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQ-ST-I-LVNITEKVYPHTPTSF------ 388 (483)
T ss_dssp ETTTCC---EE-EECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEE-EE-E-EECGGGGBCCCCCEEE------
T ss_pred EEECCC---Cc-cccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcc-cc-e-EEEeccccCCCCCeee------
Confidence 875432 11 1111 1235688999999999999999999999886 32 2 232 233345555545
Q ss_pred HhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEee-cCCcc
Q psy15127 524 RLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVM-NAATT 602 (633)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~ 602 (633)
.+..++++++.|+|++| ...++.+..| .|+|+..+... .|... .+. .....
T Consensus 389 ----------~v~~~~stsl~LsW~~P--------~~~~~~~L~Y-eVrYr~~~~~~------~~~~v---sv~~~~~~~ 440 (483)
T 3e0g_A 389 ----------KVKDINSTAVKLSWHLP--------GNFAKINFLC-EIEIKKSNSVQ------EQRNV---TIQGVENSS 440 (483)
T ss_dssp ----------EECCSSSSSCCEEEECC--------SCCTTSBCCC-EEEEECSSSCC------CEEEC---CCBCCSSSB
T ss_pred ----------EEEEecCCeEEEEECCC--------CCCCCceEEE-EEEEEECCCCC------ceEEE---EEeccCCce
Confidence 67777889999999954 3456778999 99999876542 24321 111 11234
Q ss_pred ceEEeeccccceeEEEEEeccccccccccC
Q psy15127 603 TSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 603 ~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
.+++|.+|+|++.|.|+|+|. ..|.|.+|
T Consensus 441 ~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WS 469 (483)
T 3e0g_A 441 YLVALDKLNPYTLYTFRIRCS-TETFWKWS 469 (483)
T ss_dssp CCCCCCSCCSSSSCEEEEECC-CSSCCCCC
T ss_pred eEEEEeccCCCcEEEEEEEEe-eCCCCCcC
Confidence 478999999999999999999 77885444
No 312
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=7.2e-15 Score=122.94 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=90.1
Q ss_pred EEEEEeccccCCCCCCCCceeecCCCCCCCc-chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhh
Q psy15127 485 IVRAENSHGLGIPSPVSPITRTLGLNSLVPQ-HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEAR 563 (633)
Q Consensus 485 ~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~ 563 (633)
+|+|.|..|.|+++... .++|.+..|..+| ++ ++..++.++|.|+|++| .....++
T Consensus 3 ~V~A~n~~G~g~~s~~~-~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p------~~~~~~g 59 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDI-TVVTLSDVPSAPPQNV----------------SLEVVNSRSIKVSWLPP------PSGTQNG 59 (124)
T ss_dssp SCCCCCCCCCCCCCCCC-CCCCCCCCCSSCCBSC----------------CEEEEETTEEEEECBCC------CTTTCCS
T ss_pred eEEEEeCCccCCCCCCE-EEEcCCCCCCCCCeee----------------EEEEcCCCEEEEEEECc------CCcCCCc
Confidence 57899999999988766 5778777777544 55 78888999999999954 2223688
Q ss_pred hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 564 ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 564 ~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|.+| .|+|+...... |.. ......++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 60 ~i~~Y-~v~~~~~~~~~-------~~~------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 115 (124)
T 2ed9_A 60 FITGY-KIRHRKTTRRG-------EME------TLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSN 115 (124)
T ss_dssp CCCEE-EEEEEESSSSC-------CEE------EECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCC
T ss_pred EEeEE-EEEEEECCCCc-------ceE------EecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 99999 99999876543 321 1346688999999999999999999999999999985
No 313
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.55 E-value=2.6e-14 Score=138.32 Aligned_cols=134 Identities=23% Similarity=0.357 Sum_probs=93.7
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC------------------CCCCeEEcc----cceEE
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM------------------PTGRAKILD----DRSLQ 126 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i------------------~~~~~~~~~----~~~L~ 126 (633)
.+.+...|..+.+.+|++++|.|.+.+.+.+.+.|+|++ ... ..+++.... +.+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 356677788899999999999999988888899999964 111 023444432 24799
Q ss_pred EccCCCCCCeEEEEEEEeCCc------eEEEEEEEEEEee-----cccccc-CCCceEEecCCcEEEEEeCCCCCCC-Ce
Q psy15127 127 IENVGPQDEGLYICDVENLVG------SISLRASLTVHLL-----RDDFRA-EPKDTRVASGETALLECGPPKGQPE-PT 193 (633)
Q Consensus 127 i~~v~~~d~G~Y~C~~~n~~g------~~s~~~~l~V~~~-----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 193 (633)
|.+++.+|+|.|.|.+.+..+ .....+.|.|... +|.+.. .+....+.+|+.+.|.|.+....|. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999998421 1223456777752 133322 2222334478999999995433454 79
Q ss_pred EEEEECCEEec
Q psy15127 194 LHWKKNGQFID 204 (633)
Q Consensus 194 i~W~~~~~~~~ 204 (633)
|.|+++|..+.
T Consensus 184 v~W~k~g~~l~ 194 (279)
T 2wbj_D 184 LSWWVNGKEVH 194 (279)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEECC
Confidence 99999998765
No 314
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.55 E-value=4.3e-14 Score=136.03 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=87.5
Q ss_pred CceEEEcCCCC--CCeEEEEEEecC------cCCee---eeCCCceEEEcCCeEEEEEEE---eccCCCeEEEEeCCc-c
Q psy15127 47 GSVLGARGALS--DDQWKLIAKEAL------IKPFP---ISEPSDATVLSGSVVEFVCRV---GGDPLPTILWRRDDG-K 111 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~v~------~~p~~---~~~~~~~~~~~G~~~~L~C~~---~~~p~p~i~W~~~~~-~ 111 (633)
+++|.|.+++. +|.|+|.+.+.. ....+ ...|....+.+|+.++|.|.+ .+.|.+.+.|++++. .
T Consensus 83 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~ 162 (268)
T 3mj6_A 83 DGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSH 162 (268)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTC
T ss_pred EEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCC
Confidence 37899999998 999999998710 11111 234567889999999999999 567889999999433 2
Q ss_pred CCC----------------------CCeEE-----cccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEeecccc
Q psy15127 112 MPT----------------------GRAKI-----LDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLLRDDF 164 (633)
Q Consensus 112 i~~----------------------~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~ 164 (633)
+.. .+... ..+..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~ 242 (268)
T 3mj6_A 163 TEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242 (268)
T ss_dssp SSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC----
T ss_pred CcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCee
Confidence 111 11111 235689999999999999999999999999999999997666777
Q ss_pred ccCCCceEEecCCcE
Q psy15127 165 RAEPKDTRVASGETA 179 (633)
Q Consensus 165 ~~~~~~~~~~~g~~~ 179 (633)
...|....+.+|+.+
T Consensus 243 ~~~p~~~~~~~~q~~ 257 (268)
T 3mj6_A 243 TISPTPPTDKGQQGI 257 (268)
T ss_dssp ---------------
T ss_pred eeCCCCCCCCcceec
Confidence 778877777766654
No 315
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.9e-14 Score=119.19 Aligned_cols=107 Identities=28% Similarity=0.430 Sum_probs=88.5
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC--CCeEEcccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT--GRAKILDDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~--~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
.+|.|...+....+.+|+.++|.|.+.|.|.+.+.|+|++..+.. .+.....++.|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 578888889999999999999999999999999999999998853 456666778999999999999999999999999
Q ss_pred eEEEEEEEEEEeec-cccccCCCceEEecC
Q psy15127 148 SISLRASLTVHLLR-DDFRAEPKDTRVASG 176 (633)
Q Consensus 148 ~~s~~~~l~V~~~~-p~~~~~~~~~~~~~g 176 (633)
..+..+.|.|..++ |.+...+.+..+.+|
T Consensus 87 ~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 87 EATWSAYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp EEEEECCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred cEEEEEEEEEEeCCCCccCCCCCCCccCCC
Confidence 99889999998762 223334444444444
No 316
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.55 E-value=8.7e-15 Score=134.97 Aligned_cols=143 Identities=15% Similarity=0.228 Sum_probs=101.9
Q ss_pred CCCCccccccceeeEEEE----ecc-cCCCCCceEEeeCceEEEcCCCC--CCeEEEEEEe--------------cCcCC
Q psy15127 14 SSPRAEIEPATRTNRVSI----SGD-PGFDSRRSRSIFGSVLGARGALS--DDQWKLIAKE--------------ALIKP 72 (633)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~--------------v~~~p 72 (633)
+.|.+.|.|+........ ++. ......|+.+.. +.|.|.+++. +|.|+|.+.+ +..+|
T Consensus 30 ~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p 108 (209)
T 1nbq_A 30 GFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPP 108 (209)
T ss_dssp SCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCC
T ss_pred CCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCC
Confidence 346777886554332110 000 012234555443 8899999998 9999999987 34456
Q ss_pred eeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEeCCccCCCCCe----------EE-cccceEEEccCCCCCCeEEEE
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRRDDGKMPTGRA----------KI-LDDRSLQIENVGPQDEGLYIC 140 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~~~i~~~~~----------~~-~~~~~L~i~~v~~~d~G~Y~C 140 (633)
.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... .. ...+.|.|.+++.+|+|.|+|
T Consensus 109 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 188 (209)
T 1nbq_A 109 SKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSC 188 (209)
T ss_dssp CCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEE
T ss_pred cCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEE
Confidence 65555556678999999999997 8899999999999988754321 11 135689999999999999999
Q ss_pred EEEeCCceE--EEEEEEEE
Q psy15127 141 DVENLVGSI--SLRASLTV 157 (633)
Q Consensus 141 ~~~n~~g~~--s~~~~l~V 157 (633)
.|.|..|.. +..+.|.|
T Consensus 189 ~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 189 EARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp EEECSSSCCEECCCBCCEE
T ss_pred EEeCCcCcccccccEEEEE
Confidence 999999986 44444444
No 317
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=4.5e-14 Score=112.73 Aligned_cols=90 Identities=26% Similarity=0.283 Sum_probs=78.2
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe-EEc----ccceEEEccCCCCCCeEEEEEEEe
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA-KIL----DDRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~-~~~----~~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..... ... ....|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 568898999999999999999999999999999999999998875432 221 224799999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy15127 145 LVGSISLRASLTVHL 159 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~ 159 (633)
..|..+..+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999998888888874
No 318
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.54 E-value=3.4e-14 Score=135.13 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=83.2
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-----------------cCc---CCeee-eCCCceEEEcCCeEEEEEEEeccCCCeE
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-----------------ALI---KPFPI-SEPSDATVLSGSVVEFVCRVGGDPLPTI 103 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-----------------v~~---~p~~~-~~~~~~~~~~G~~~~L~C~~~~~p~p~i 103 (633)
+.+|.|.+++. +|.|+|.+.+ +.. +|.+. ..+....+.+|+.+.|.|.+.+.|.|.|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 35899999998 9999999988 111 23333 2334566778999999999999999999
Q ss_pred EEEeCCccCCCC-------------------------CeEEcccceEEEccCCCCCCeEEEEEEEeCC---ceEEEEEEE
Q psy15127 104 LWRRDDGKMPTG-------------------------RAKILDDRSLQIENVGPQDEGLYICDVENLV---GSISLRASL 155 (633)
Q Consensus 104 ~W~~~~~~i~~~-------------------------~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~---g~~s~~~~l 155 (633)
+|+|++..+... +........|.|.+++.+|+|.|+|.|.|.. |.....+.|
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 999998877541 1111134689999999999999999999954 445555555
Q ss_pred EE
Q psy15127 156 TV 157 (633)
Q Consensus 156 ~V 157 (633)
.|
T Consensus 249 ~V 250 (250)
T 2fbo_J 249 KV 250 (250)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 319
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.54 E-value=5.2e-14 Score=131.98 Aligned_cols=115 Identities=27% Similarity=0.434 Sum_probs=92.3
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe------------cC----cCCeeee-CCCceEEEcCCeEEEEEEEeccCCCeEEEE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE------------AL----IKPFPIS-EPSDATVLSGSVVEFVCRVGGDPLPTILWR 106 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~------------v~----~~p~~~~-~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~ 106 (633)
.+++|.|.+++. +|.|+|.+.| +. .+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 74 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 153 (231)
T 3ojm_B 74 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWI 153 (231)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEE
T ss_pred CcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEE
Confidence 346899999998 9999999988 21 2333333 356778999999999999999999999999
Q ss_pred e----CCccCCCCCeE---E--------cccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 107 R----DDGKMPTGRAK---I--------LDDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 107 ~----~~~~i~~~~~~---~--------~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
+ +|..+..+... . ...+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 154 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 154 KHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp EECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecC
Confidence 9 77766433211 1 12357999999999999999999999999999999999877
No 320
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=3.1e-14 Score=113.93 Aligned_cols=92 Identities=30% Similarity=0.508 Sum_probs=81.7
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCC--CCCeEEcccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMP--TGRAKILDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
..+|.|...|....+.+|+.+.|.|.+.+.|.+.+.|+|++..+. ..+.....++.|.|.+++.+|+|.|+|.|.|..
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 357889999999999999999999999999999999999998875 345555667899999999999999999999999
Q ss_pred ceEEEEEEEEEEee
Q psy15127 147 GSISLRASLTVHLL 160 (633)
Q Consensus 147 g~~s~~~~l~V~~~ 160 (633)
|..+..+.|.|..+
T Consensus 86 g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 86 GETSWSAVLDVTES 99 (100)
T ss_dssp CCCBCCEEEEEESC
T ss_pred CCEEEEEEEEEecC
Confidence 99888888988865
No 321
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.54 E-value=2.6e-14 Score=131.69 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=93.5
Q ss_pred CceEEeeCceEEEcCCCC--CCeEEEEEEe-------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEeccCCC
Q psy15127 40 RRSRSIFGSVLGARGALS--DDQWKLIAKE-------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGGDPLP 101 (633)
Q Consensus 40 ~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~-------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p 101 (633)
.|+.+..+++|.|.+++. +|.|+|.+.+ +. ..|.+...+.. +.+|+.+.|.|.+.+.| |
T Consensus 63 ~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p 139 (208)
T 3r4d_A 63 GREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-A 139 (208)
T ss_dssp SSEEECTTSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-C
T ss_pred ceeEEecCCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-C
Confidence 466777788999999998 9999999988 22 22555555544 88999999999998866 7
Q ss_pred eEEEEeCCccCCCCC-eEEcc-cceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEEEee
Q psy15127 102 TILWRRDDGKMPTGR-AKILD-DRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 102 ~i~W~~~~~~i~~~~-~~~~~-~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V~~~ 160 (633)
.+.|++++..+..+. ..... ++.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..+
T Consensus 140 ~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~ 201 (208)
T 3r4d_A 140 NIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFD 201 (208)
T ss_dssp EEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC--
T ss_pred ceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeC
Confidence 999999999886543 33333 478999999999999999999999988 466777777765
No 322
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=3.9e-14 Score=111.54 Aligned_cols=88 Identities=19% Similarity=0.238 Sum_probs=75.9
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCCCCCeEEc--ccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMPTGRAKIL--DDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
+|.|...+..+.+.+|+.+.|.|.+.|.|.|.++|+|++ ..+........ ....|.|.+++.+|+|.|+|.|.|..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 81 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCC
Confidence 688888888899999999999999999999999999999 87765532222 23679999999999999999999999
Q ss_pred ceEEEEEEEEEE
Q psy15127 147 GSISLRASLTVH 158 (633)
Q Consensus 147 g~~s~~~~l~V~ 158 (633)
|..+..+.|.|.
T Consensus 82 G~~~~~~~l~V~ 93 (93)
T 1wit_A 82 GEDEAIFEVIVQ 93 (93)
T ss_dssp EEEEEEEEEEEC
T ss_pred CeEEEEEEEEEC
Confidence 998888888773
No 323
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=1.4e-13 Score=123.99 Aligned_cols=112 Identities=18% Similarity=0.248 Sum_probs=90.1
Q ss_pred ceEEEcCCCCCCeEEEEEEe---------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccC-CCeEEEEe---CCc-cCC
Q psy15127 48 SVLGARGALSDDQWKLIAKE---------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDP-LPTILWRR---DDG-KMP 113 (633)
Q Consensus 48 ~~L~i~~v~~~G~Y~C~a~~---------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p-~p~i~W~~---~~~-~i~ 113 (633)
..|.|.....+|.|+|.|.| +..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++. .+.
T Consensus 51 ~~l~i~~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~ 130 (184)
T 3b5h_A 51 TEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALM 130 (184)
T ss_dssp EEEEECGGGCCEEEEEEEESTTSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECC
T ss_pred EEEEEechhhCeEEEEEEECCcCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEee
Confidence 35667633339999999996 67788888888888899999999999999999 79999999 444 332
Q ss_pred C---CCeEEccc---ceEEEccCC-CCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 114 T---GRAKILDD---RSLQIENVG-PQDEGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 114 ~---~~~~~~~~---~~L~i~~v~-~~d~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
. +++....+ ..|.|.+++ .+|+|.|+|.|.|..|.....+.|.|..
T Consensus 131 ~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 131 NGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 2 34444332 489999999 9999999999999999988888888864
No 324
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.53 E-value=4.5e-15 Score=139.61 Aligned_cols=173 Identities=12% Similarity=0.013 Sum_probs=103.6
Q ss_pred EEEEecCcCCeeeeCCCceE--EEcCCeEEEEEEEecc---CCC-eEEEEeCCccCCCCC---------eEEcccceEEE
Q psy15127 63 LIAKEALIKPFPISEPSDAT--VLSGSVVEFVCRVGGD---PLP-TILWRRDDGKMPTGR---------AKILDDRSLQI 127 (633)
Q Consensus 63 C~a~~v~~~p~~~~~~~~~~--~~~G~~~~L~C~~~~~---p~p-~i~W~~~~~~i~~~~---------~~~~~~~~L~i 127 (633)
|.+.+- .+|.+...++... +.+|++++|.|.+.+. |.+ .|+|+|++..+.... ........|.|
T Consensus 8 ~~~~~~-~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I 86 (239)
T 1i1c_A 8 CGCTGS-EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPI 86 (239)
T ss_dssp ----------CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEEC
T ss_pred CCCCCC-cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEE
Confidence 444333 3344434444444 7899999999999876 766 899999987654221 01112347999
Q ss_pred ccCCCCCCeEEEEEEEeCCceE--EEEEEE--EEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEE
Q psy15127 128 ENVGPQDEGLYICDVENLVGSI--SLRASL--TVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQF 202 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~g~~--s~~~~l--~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~ 202 (633)
.+++.+|+|.|+|.+.+..+.. ...+.+ .+..+ |.+.+.+.......|+.+.|.|.+...+|. ..|.|++||..
T Consensus 87 ~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~-P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~ 165 (239)
T 1i1c_A 87 VERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRG-PQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQP 165 (239)
T ss_dssp CHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBC-CEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred EhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCcC-CEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEE
Confidence 9999999999999999987753 223322 22333 544443333223458899999995433665 59999999998
Q ss_pred eccCCCee-EEeccceeeeE---EE-------eeeEEEEeecCCCC
Q psy15127 203 IDLESSKS-LDLSRRTLGWL---RV-------RPLYWNVARPRANL 237 (633)
Q Consensus 203 ~~~~~~~~-~~~~~~~~~~~---~~-------~g~y~C~a~~~~~~ 237 (633)
+....... ....++.+.+. .+ .+.|+|.+.|....
T Consensus 166 l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 166 QENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 75321111 11222222221 11 37899999987643
No 325
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.53 E-value=1.5e-14 Score=144.92 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=91.5
Q ss_pred eCceEEEcCCCC--CC-eEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc
Q psy15127 46 FGSVLGARGALS--DD-QWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG 110 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G-~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~ 110 (633)
.+++|.|.+++. +| .|+|.|.| |..+|.+ ....+.+|+.++|.|.+.|.|.|.|+|+|+|.
T Consensus 210 ~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~ 285 (347)
T 2ifg_A 210 PSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGS 285 (347)
T ss_dssp SEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTE
T ss_pred ccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCE
Confidence 457899999998 99 99999998 4445554 11224679999999999999999999999999
Q ss_pred cCCCCCeEEc-----------ccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 111 KMPTGRAKIL-----------DDRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 111 ~i~~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
.+..+..... .+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 286 VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 346 (347)
T ss_dssp ECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCC
T ss_pred ECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCC
Confidence 8876543321 2457999999999999999999999999999999888765
No 326
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.53 E-value=7.3e-14 Score=114.94 Aligned_cols=92 Identities=26% Similarity=0.508 Sum_probs=81.1
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC--CCeEEcccc----eEEEccCCCCCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT--GRAKILDDR----SLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~--~~~~~~~~~----~L~i~~v~~~d~G~Y~C~~ 142 (633)
..+|.|+..|.++.+.+|+.++|.|.+.|.|.+.+.|+|++..+.. .+.....+. +|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4578999999999999999999999999999999999999998864 344444332 7999999999999999999
Q ss_pred EeCCceEEEEEEEEEEee
Q psy15127 143 ENLVGSISLRASLTVHLL 160 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~ 160 (633)
.|..|..+..+.|.|..+
T Consensus 93 ~N~~G~~~~~~~l~V~~~ 110 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTAR 110 (116)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EcCCCeEEEEEEEEEeCC
Confidence 999999999999999987
No 327
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.53 E-value=4.5e-14 Score=130.87 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=86.5
Q ss_pred eEEEcCCCC--CCeEEEEEEe--------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC
Q psy15127 49 VLGARGALS--DDQWKLIAKE--------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD 109 (633)
Q Consensus 49 ~L~i~~v~~--~G~Y~C~a~~--------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~ 109 (633)
.|.|.+++. +|.|+|.|.| + ..+|.+...| ...+.+|++++|.|.+.+.+.+.+.|+|+|
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g 143 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEG 143 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETT
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECC
Confidence 899999998 9999999988 1 1356666555 557899999999997777778899999999
Q ss_pred ccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCc-----eEEEEEEEEEEee
Q psy15127 110 GKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVG-----SISLRASLTVHLL 160 (633)
Q Consensus 110 ~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~~~ 160 (633)
..+..........+.|.|.+++.+|+|.|+|.|.|... ..+..+.|.|...
T Consensus 144 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 144 ELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp CSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CcccccccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 98765332233467899999999999999999997531 2456677777765
No 328
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.53 E-value=8e-14 Score=112.21 Aligned_cols=92 Identities=20% Similarity=0.217 Sum_probs=80.0
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcc---cceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILD---DRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.|.++|+|++..+... +..... ...|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 45788999999999999999999999999999999999999988654 333322 24799999999999999999999
Q ss_pred CCceEEEEEEEEEEee
Q psy15127 145 LVGSISLRASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~ 160 (633)
..|..+..+.|.|...
T Consensus 86 ~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 86 YKGEASDYATLDVTGG 101 (103)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEECC
Confidence 9999999999998764
No 329
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.53 E-value=5.9e-14 Score=112.30 Aligned_cols=92 Identities=23% Similarity=0.385 Sum_probs=79.0
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC---eEEccc--ceEEEccCCCCCCeEEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR---AKILDD--RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~---~~~~~~--~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
..+|.|...|..+.+.+|+.++|.|.+.|.|.|.+.|+|++..+.... .....+ ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 467888888999999999999999999999999999999998876542 222233 389999999999999999999
Q ss_pred eCCceEEEEEEEEEEee
Q psy15127 144 NLVGSISLRASLTVHLL 160 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~ 160 (633)
|..|..+..+.|.|...
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 83 NRAGEATFTVQLDVLAK 99 (100)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred cCCCeEEEEEEEEEEec
Confidence 99999999999988764
No 330
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.52 E-value=4.8e-14 Score=111.51 Aligned_cols=87 Identities=23% Similarity=0.344 Sum_probs=76.7
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
.+|.+...+....+.+|+.+.|.|.+.+.| |.+.|+|++..+..+.+....++.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 86 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSD 86 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcE
Confidence 467788888899999999999999999987 7999999999887655555567899999999999999999999999998
Q ss_pred EEEEEEEE
Q psy15127 150 SLRASLTV 157 (633)
Q Consensus 150 s~~~~l~V 157 (633)
+..+.|.|
T Consensus 87 ~~~~~l~V 94 (95)
T 2ckn_A 87 TTYFSVNV 94 (95)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888876
No 331
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.52 E-value=9.9e-14 Score=112.54 Aligned_cols=93 Identities=27% Similarity=0.486 Sum_probs=80.9
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcccc---eEEEccCCCCCCeEEEEEEE
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDDR---SLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~ 143 (633)
+..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+... +.....++ .|.|.+++.+|+|.|+|.|.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 456789999999999999999999999999999999999999988654 33333444 79999999999999999999
Q ss_pred eCCceEEEEEEEEEEee
Q psy15127 144 NLVGSISLRASLTVHLL 160 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~ 160 (633)
|..|..+..+.|.|..+
T Consensus 90 n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp ETTEEEEEEEEEEEEC-
T ss_pred cCCCcEEEEEEEEEEcC
Confidence 99999999999999876
No 332
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=4e-14 Score=113.02 Aligned_cols=91 Identities=31% Similarity=0.504 Sum_probs=78.9
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE-cccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI-LDDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|+|++..+....... .....|.|.+++.+|+|.|+|.|.|..
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~ 87 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENAL 87 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSS
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECC
Confidence 4567889999999999999999999999999999999999999887554333 334689999999999999999999999
Q ss_pred ceEEEEEEEEEE
Q psy15127 147 GSISLRASLTVH 158 (633)
Q Consensus 147 g~~s~~~~l~V~ 158 (633)
|..+..+.|.|.
T Consensus 88 g~~~~~~~l~V~ 99 (99)
T 2yr3_A 88 GQVSCSAWVTVH 99 (99)
T ss_dssp CEEEEECCEEEC
T ss_pred CeEEEEEEEEEC
Confidence 998888887763
No 333
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.51 E-value=1.3e-13 Score=129.84 Aligned_cols=164 Identities=21% Similarity=0.270 Sum_probs=106.5
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC----------------CCCCeEEcc----cceEEEccCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM----------------PTGRAKILD----DRSLQIENVG 131 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i----------------~~~~~~~~~----~~~L~i~~v~ 131 (633)
++..|..+.+.+|++++|.|.+. .+.+.+.|+|++. .. ..+++.... +..|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 45567888999999999999985 4578999999642 11 023444332 2489999999
Q ss_pred CCCCeEEEEEEEeCCc-----eEEEEEEEEEEee-----cccccc-CCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 132 PQDEGLYICDVENLVG-----SISLRASLTVHLL-----RDDFRA-EPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 132 ~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~~~-----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
.+|+|.|.|.+.+..+ .....+.|.|... +|.+.. .+....+.+|+.+.|.|.+....|.+ .+.|+++
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 160 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEET
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEEC
Confidence 9999999999998642 1223456777652 243332 33334456799999999954335755 9999999
Q ss_pred CEEeccCCCe---eEEeccceeeeE---EE--------eeeEEEEeecCCCCC
Q psy15127 200 GQFIDLESSK---SLDLSRRTLGWL---RV--------RPLYWNVARPRANLN 238 (633)
Q Consensus 200 ~~~~~~~~~~---~~~~~~~~~~~~---~~--------~g~y~C~a~~~~~~~ 238 (633)
|..+...... ........+.+. .+ .+.|+|.+.|.....
T Consensus 161 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 213 (238)
T 1bec_A 161 GKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 213 (238)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCCT
T ss_pred CEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCCC
Confidence 9988643211 111122222211 11 357999999975443
No 334
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.51 E-value=3.4e-14 Score=128.11 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=80.1
Q ss_pred eeCceEEEcCCCC--CCeEEEEEEe--------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEE
Q psy15127 45 IFGSVLGARGALS--DDQWKLIAKE--------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILW 105 (633)
Q Consensus 45 ~~~~~L~i~~v~~--~G~Y~C~a~~--------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W 105 (633)
..++.|.|.+++. +|.|+|.|.| + ..+|.+...| ...+.+|+.++|.|.+.+. .+.+.|
T Consensus 49 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w 126 (184)
T 2gi7_A 49 QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFAL 126 (184)
T ss_dssp ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEE
T ss_pred CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEE
Confidence 4567899999998 9999999988 1 2345665555 4567899999999998765 469999
Q ss_pred EeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 106 RRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 106 ~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
+|+|..+..........+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 127 ~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 127 YKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 999988765333333456899999999999999999999753
No 335
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.51 E-value=5.1e-15 Score=138.79 Aligned_cols=135 Identities=12% Similarity=0.147 Sum_probs=89.7
Q ss_pred CCee-eeCCCceEEEcCCeEEEEEEEecc-CC-C-eEEEEeCCccC-CCCCeEE--c------ccceEEEccCCCCCCeE
Q psy15127 71 KPFP-ISEPSDATVLSGSVVEFVCRVGGD-PL-P-TILWRRDDGKM-PTGRAKI--L------DDRSLQIENVGPQDEGL 137 (633)
Q Consensus 71 ~p~~-~~~~~~~~~~~G~~~~L~C~~~~~-p~-p-~i~W~~~~~~i-~~~~~~~--~------~~~~L~i~~v~~~d~G~ 137 (633)
+|.+ +..|....+.+|+.++|.|.+.+. |. | .|+|+++|..+ ....... . ....|.|.+++.+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 3444 466777777899999999999884 64 4 99999999877 3221111 1 12369999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEE---eecccccc-CCCceEEecCCcEEEEEeCCCCCC-CCeEEEEECCEEeccC
Q psy15127 138 YICDVENLVGSISLRASLTVH---LLRDDFRA-EPKDTRVASGETALLECGPPKGQP-EPTLHWKKNGQFIDLE 206 (633)
Q Consensus 138 Y~C~~~n~~g~~s~~~~l~V~---~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~~~~~~~~~ 206 (633)
|+|.|.+..+.......|.+. ..+|.+.+ .+.... ..+..+.|.|.+....| .+.|.|++||..+...
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 164 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPAT 164 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCc
Confidence 999999887543222222221 11244332 222222 23567999999544355 4799999999988654
No 336
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.51 E-value=1.5e-13 Score=109.76 Aligned_cols=91 Identities=35% Similarity=0.617 Sum_probs=78.8
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.|...+....+.+|+.+.|.|.+.+.|.|.+.|+|++..+..+ +.....+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 45788999999999999999999999999999999999999988654 3333332 2799999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy15127 145 LVGSISLRASLTVHL 159 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~ 159 (633)
..|..+..+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999999998888864
No 337
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.51 E-value=4.1e-14 Score=118.19 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=82.1
Q ss_pred eccccCCCCCCCCceeecCC------CCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhh
Q psy15127 490 NSHGLGIPSPVSPITRTLGL------NSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEAR 563 (633)
Q Consensus 490 n~~G~g~~s~~~~~~~t~~~------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~ 563 (633)
+..|.|++|... .++|.+. +|.+|.++ ++..++ ++|.|+|++| ...+|
T Consensus 2 t~~G~g~~S~~~-~~~T~~~~~~~~~~P~~P~~l----------------~~~~~~-~sv~l~W~~P--------~~~~g 55 (126)
T 1x5i_A 2 SSGSSGPATDWL-SAETFESDLDETRVPEVPSSL----------------HVRPLV-TSIVVSWTPP--------ENQNI 55 (126)
T ss_dssp CSCCCCCCCCCC-CSCCCCTTSBCSSCCCSCSEE----------------EEEEET-TEEEEEEECC--------SCTTB
T ss_pred CCCccCCCCCCE-EeECccccCccCCCCCCCCee----------------EEEecC-CEEEEEEcCC--------CCCCC
Confidence 568999999877 4777776 77766666 777776 9999999965 45688
Q ss_pred hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 564 ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 564 ~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|++| .|+|+. +... | ..+......++++|.+|+|++.|.|+|+|.|.+|.|++|.
T Consensus 56 ~i~~Y-~v~y~~-~~~~-------~-----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~ 111 (126)
T 1x5i_A 56 VVRGY-AIGYGI-GSPH-------A-----QTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLY 111 (126)
T ss_dssp CCCEE-EEEECS-SCGG-------G-----EEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCC
T ss_pred CEeEE-EEEEEc-CCCC-------c-----eEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCccee
Confidence 99999 999983 2211 1 1223456789999999999999999999999999999874
No 338
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.51 E-value=2.1e-14 Score=132.19 Aligned_cols=166 Identities=14% Similarity=0.112 Sum_probs=98.5
Q ss_pred CeeeeCCCceEE--EcCCeEEEEEEEeccC----CCeEEEEeCCccCCCCC---eEEcccceEEEc------cCCCCCCe
Q psy15127 72 PFPISEPSDATV--LSGSVVEFVCRVGGDP----LPTILWRRDDGKMPTGR---AKILDDRSLQIE------NVGPQDEG 136 (633)
Q Consensus 72 p~~~~~~~~~~~--~~G~~~~L~C~~~~~p----~p~i~W~~~~~~i~~~~---~~~~~~~~L~i~------~v~~~d~G 136 (633)
|.+...|+...+ .+|++++|.|.+.+.+ .+.|+|+|++..+.... .....++.|.+. ....+|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 455455555444 7999999999998865 24899999998765431 122234444443 33344599
Q ss_pred EEEEEEEeCCceEEEEEEE----EEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEeccCCCe-e
Q psy15127 137 LYICDVENLVGSISLRASL----TVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDLESSK-S 210 (633)
Q Consensus 137 ~Y~C~~~n~~g~~s~~~~l----~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~~~~~-~ 210 (633)
.|+|.|.|..+.......+ .+..+ |.+.+.+.......|..+.|.|.+....|. +.|.|+++|..+...... .
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~-P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 160 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPRE-PQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP 160 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBC-CEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCC
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcC-CEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCc
Confidence 9999999987754222233 22333 444333322222346679999995433565 499999999987532111 1
Q ss_pred EEeccceeeeE---EE-------eeeEEEEeecCCCCC
Q psy15127 211 LDLSRRTLGWL---RV-------RPLYWNVARPRANLN 238 (633)
Q Consensus 211 ~~~~~~~~~~~---~~-------~g~y~C~a~~~~~~~ 238 (633)
....++.+.+. .+ .|.|+|.|.|.....
T Consensus 161 ~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 198 (207)
T 1l6x_A 161 VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 198 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcCC
Confidence 11222222221 11 479999999986543
No 339
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=137.43 Aligned_cols=132 Identities=18% Similarity=0.250 Sum_probs=88.7
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccC------C----------CC-CeEEcccce--EEEccCCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKM------P----------TG-RAKILDDRS--LQIENVGP 132 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i------~----------~~-~~~~~~~~~--L~i~~v~~ 132 (633)
+...|..+.+.+|++++|.|.+.+.+.+.+.|+|.. ... . .+ ++....+.. |.|.+++.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~ 83 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANM 83 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESC
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCCh
Confidence 345577888999999999999888888899999832 110 0 01 333322222 99999999
Q ss_pred CCCeEEEEEEEeCCc------eEEEEEEEEEEee-----cccccc-CCCceEEecCCcEEEEEeCCCCCCCC-eEEEEEC
Q psy15127 133 QDEGLYICDVENLVG------SISLRASLTVHLL-----RDDFRA-EPKDTRVASGETALLECGPPKGQPEP-TLHWKKN 199 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~g------~~s~~~~l~V~~~-----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~-~i~W~~~ 199 (633)
+|+|.|.|.+.+..+ .......|.|... +|.+.+ .+....+..|+.++|.|.+....|.+ .+.|+++
T Consensus 84 ~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~ 163 (253)
T 3to4_D 84 SQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 163 (253)
T ss_dssp SSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEEC
Confidence 999999999986543 2233456777642 132222 12222233578999999954447777 9999999
Q ss_pred CEEecc
Q psy15127 200 GQFIDL 205 (633)
Q Consensus 200 ~~~~~~ 205 (633)
|..+..
T Consensus 164 g~~l~~ 169 (253)
T 3to4_D 164 GKEVHS 169 (253)
T ss_dssp TEEECT
T ss_pred CEECCC
Confidence 987753
No 340
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.50 E-value=5e-14 Score=128.49 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=83.2
Q ss_pred CceEEEcCCCC--CCeEEEEEEe--------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE--------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR 107 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~--------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~ 107 (633)
+++|.|.+++. +|.|+|.|.| + ..+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|+|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k 134 (196)
T 3p2t_A 57 KARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCK 134 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEE
T ss_pred eEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEe
Confidence 47899999998 9999999988 1 124555555543 68899999999999874 56899999
Q ss_pred CCccCCCCCeE-----EcccceEEEccCCCCCCeEEEEEEEeCCc-----eEEEEEEEEEE
Q psy15127 108 DDGKMPTGRAK-----ILDDRSLQIENVGPQDEGLYICDVENLVG-----SISLRASLTVH 158 (633)
Q Consensus 108 ~~~~i~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~ 158 (633)
+|..+...... ....+.|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 135 ERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp TTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred CCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99877543221 12356899999999999999999999875 23445555553
No 341
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=109.44 Aligned_cols=90 Identities=27% Similarity=0.356 Sum_probs=77.4
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-C-eEEcccc---eEEEccCCCCCCeEEEEEEEe
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-R-AKILDDR---SLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~-~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.+|.|...|....+.+|+.++|.|.+.+.|.|.+.|+|++..+... + .....++ .|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 5788989999999999999999999999999999999999988654 2 2222222 699999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy15127 145 LVGSISLRASLTVHL 159 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~ 159 (633)
..|..+..+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999998888888864
No 342
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.50 E-value=3e-14 Score=134.34 Aligned_cols=126 Identities=21% Similarity=0.261 Sum_probs=81.6
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC----CCeEEEEeCCc--cC------C-----------------CCCeEEcc-----
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP----LPTILWRRDDG--KM------P-----------------TGRAKILD----- 121 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p----~p~i~W~~~~~--~i------~-----------------~~~~~~~~----- 121 (633)
.+|..+.+.+|++++|.|.+.+.+ ...+.|+|... .. . .+++....
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 446678899999999999998755 34899998431 10 0 12332221
Q ss_pred cceEEEccCCCCCCeEEEEEEEeCCc-------------eEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeC
Q psy15127 122 DRSLQIENVGPQDEGLYICDVENLVG-------------SISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGP 185 (633)
Q Consensus 122 ~~~L~i~~v~~~d~G~Y~C~~~n~~g-------------~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~ 185 (633)
...|.|.+++.+|+|.|.|.+.+..+ .......|.|.. .+|.+...+....+..|+.+.|.|.+
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 164 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 164 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEE
Confidence 13599999999999999999986521 122334566652 12444433333445679999999996
Q ss_pred CCCCCCC-eEEEEECCE
Q psy15127 186 PKGQPEP-TLHWKKNGQ 201 (633)
Q Consensus 186 ~~~~p~~-~i~W~~~~~ 201 (633)
....|.+ .+.|++++.
T Consensus 165 ~~~~p~~~~v~W~~~g~ 181 (239)
T 3tv3_H 165 KDYFPEPVTVSWNSGAL 181 (239)
T ss_dssp EEEBSSCCEEEEGGGTB
T ss_pred eeEeCCCeEEEEEECCc
Confidence 4446644 688998875
No 343
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.50 E-value=3.6e-12 Score=115.57 Aligned_cols=235 Identities=18% Similarity=0.225 Sum_probs=152.0
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEec-cC---CCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGG-DP---LPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~-~p---~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.+...|....+..|+.++|.|.+.+ .| .-.++|+|||..+... ...|.|..+...|+|.|+|.+.+..|.
T Consensus 4 tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa------T~tLti~s~t~sdSG~YqCvVTDa~Gc 77 (304)
T 3shs_A 4 TVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN------TATLTVADATSENAGSYKVTVQDTDTM 77 (304)
T ss_dssp EEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC------SSEEEESSCCGGGCEEEEEEEEETTTC
T ss_pred EEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC------cceEEeeeccccCCeEEEEEEEECCCC
Confidence 4455677777899999999999864 45 3379999999887542 248999999999999999999998777
Q ss_pred EEEEEEEEEEeec-ccc-ccCCCceEEecCCcEEEEEeC--CCCCC-----CCeEEEEECCEEeccCCCeeEEeccceee
Q psy15127 149 ISLRASLTVHLLR-DDF-RAEPKDTRVASGETALLECGP--PKGQP-----EPTLHWKKNGQFIDLESSKSLDLSRRTLG 219 (633)
Q Consensus 149 ~s~~~~l~V~~~~-p~~-~~~~~~~~~~~g~~~~l~C~~--~~~~p-----~~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 219 (633)
......+.|.... +.+ ...|....+..|..+.|.+.+ ..|.| ..+|+|++++..+.... .+......
T Consensus 78 s~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq--~lT~sS~T-- 153 (304)
T 3shs_A 78 TSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ--DITIQEFT-- 153 (304)
T ss_dssp CEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS--EEEECSCC--
T ss_pred eeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc--ccceeeEE--
Confidence 5444455555431 122 223555566678899999885 55665 46999999998775332 11111111
Q ss_pred eEEEeeeEEEEeecCCCCCCc-----ccc------cccceeEEecCCceEEEEEEEee------ecCC----eeEEEE--
Q psy15127 220 WLRVRPLYWNVARPRANLNPR-----YIG------RKMASLLIWNHPRVNRLSCFAEG------SPLP----SVFWTQ-- 276 (633)
Q Consensus 220 ~~~~~g~y~C~a~~~~~~~p~-----~~~------~~~~~~~~~~~g~~~~l~C~~~g------~p~~----~v~W~~-- 276 (633)
....|.|.|.+.+..+-... +.. ...........|+.+.|...+.. ...| .+.|+.
T Consensus 154 -ateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (304)
T 3shs_A 154 -ADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQR 232 (304)
T ss_dssp -GGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEEEC
T ss_pred -ecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEEee
Confidence 11258999999987652111 000 11111223446777777766532 1223 346764
Q ss_pred CCEE----EEeccCCccceEEEccCceEEEcCCCCCCCeEEEEEEE
Q psy15127 277 EGSQ----VLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 318 (633)
Q Consensus 277 ~g~~----~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 318 (633)
.|+. +....+.....+.+.++++|.-.....+|...|-|.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 233 EGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp TTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred cCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 3431 11112233456677888999999999999999999884
No 344
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.49 E-value=1.5e-13 Score=119.54 Aligned_cols=109 Identities=29% Similarity=0.487 Sum_probs=83.8
Q ss_pred CCeEEEEEEe-cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc-----cceEEEccCC
Q psy15127 58 DDQWKLIAKE-ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD-----DRSLQIENVG 131 (633)
Q Consensus 58 ~G~Y~C~a~~-v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~-----~~~L~i~~v~ 131 (633)
.+.+.+.+.. +..+|.|...+..+.+.+|+.++|.|.+.|.|.|.|+|+|++..+......... ...|.|.+++
T Consensus 27 ~~~~~~~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~ 106 (154)
T 1fhg_A 27 DAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVC 106 (154)
T ss_dssp -------CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCC
T ss_pred cceeeehhcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCC
Confidence 4444444433 678899999999999999999999999999999999999999988765333221 2489999999
Q ss_pred CCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccC
Q psy15127 132 PQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAE 167 (633)
Q Consensus 132 ~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~ 167 (633)
..|+|.|+|.|.|..|..+..+.|.|..+ |.....
T Consensus 107 ~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~-p~~~~~ 141 (154)
T 1fhg_A 107 GDDDAKYTCKAVNSLGEATCTAELLVETM-GKEGEG 141 (154)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECC-------
T ss_pred hhcCEEEEEEEEECCCeEEEEEEEEEeCc-CcCCCC
Confidence 99999999999999999999999999987 554433
No 345
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.49 E-value=4.5e-14 Score=132.59 Aligned_cols=126 Identities=22% Similarity=0.292 Sum_probs=77.7
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeE--EEEeCCc--c---C-----------------CCCCeEEccc-----ce
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTI--LWRRDDG--K---M-----------------PTGRAKILDD-----RS 124 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i--~W~~~~~--~---i-----------------~~~~~~~~~~-----~~ 124 (633)
.+|+.+.+.+|++++|.|.+.+.+ ...+ .|+|... . + ..+|+....+ ..
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 84 (232)
T 3qhz_H 5 RESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVV 84 (232)
T ss_dssp EEECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEE
T ss_pred EcCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEE
Confidence 445567899999999999997532 2344 9998421 1 0 0123333322 36
Q ss_pred EEEccCCCCCCeEEEEEEEeCC--------ceEEEEEEEEEEe---eccccccCCCceEEecCCcEEEEEeCCCCCC-CC
Q psy15127 125 LQIENVGPQDEGLYICDVENLV--------GSISLRASLTVHL---LRDDFRAEPKDTRVASGETALLECGPPKGQP-EP 192 (633)
Q Consensus 125 L~i~~v~~~d~G~Y~C~~~n~~--------g~~s~~~~l~V~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~ 192 (633)
|.|.+++.+|+|.|.|.+.+.. ........|.|.. .+|.+...+....+..|+.++|.|.+....| ..
T Consensus 85 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~ 164 (232)
T 3qhz_H 85 LTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 164 (232)
T ss_dssp EEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCC
T ss_pred EEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCe
Confidence 9999999999999999998652 2233445667752 1244443333345567999999999544455 34
Q ss_pred eEEEEECCE
Q psy15127 193 TLHWKKNGQ 201 (633)
Q Consensus 193 ~i~W~~~~~ 201 (633)
.+.|++++.
T Consensus 165 ~v~W~~~g~ 173 (232)
T 3qhz_H 165 TVSWNSGAL 173 (232)
T ss_dssp EEEEGGGTB
T ss_pred EEEEEECCE
Confidence 788998874
No 346
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.48 E-value=6.3e-14 Score=126.79 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=83.8
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe--------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE--------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWR 106 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~--------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~ 106 (633)
.++.|.|.+++. +|.|+|.+.+ + ..+|.+...| ...+.+|+.++|.|.+.+ +.+.+.|+
T Consensus 55 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~ 132 (188)
T 1oll_A 55 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLL 132 (188)
T ss_dssp CEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEE
T ss_pred ceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEE
Confidence 346799999998 9999999976 1 1256666555 456899999999999865 45789999
Q ss_pred eCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCc---eEEEEEEEEEE
Q psy15127 107 RDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVG---SISLRASLTVH 158 (633)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g---~~s~~~~l~V~ 158 (633)
|+|..+..........+.|.|.+++.+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 133 k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 133 KEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred ECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 99987754222223457899999999999999999988642 23556666664
No 347
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=6.2e-14 Score=131.28 Aligned_cols=130 Identities=17% Similarity=0.169 Sum_probs=87.1
Q ss_pred eeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC-----------------CCCCeEEcc-----cceEEE
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM-----------------PTGRAKILD-----DRSLQI 127 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i-----------------~~~~~~~~~-----~~~L~i 127 (633)
+...|..+.+.+|++++|.|.+.+. +.+.+.|+|+. ..+ ..+++.... +..|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556788899999999999999764 56789999853 211 123333332 237999
Q ss_pred ccCCCCCCeEEEEEEEeC--Cc--eEEEEEEEEEEee--------ccccc-cCCCceEEecCCcEEEEEeCCCCCCC-Ce
Q psy15127 128 ENVGPQDEGLYICDVENL--VG--SISLRASLTVHLL--------RDDFR-AEPKDTRVASGETALLECGPPKGQPE-PT 193 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~--~g--~~s~~~~l~V~~~--------~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 193 (633)
.+++.+|+|.|.|.+.+. .. .....+.|.|... +|... ..|....+..|+.++|.|.+....|. +.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeE
Confidence 999999999999999874 11 1223457777621 12221 12333345568999999996544575 59
Q ss_pred EEEEE-CCEEe
Q psy15127 194 LHWKK-NGQFI 203 (633)
Q Consensus 194 i~W~~-~~~~~ 203 (633)
+.|++ +|..+
T Consensus 164 v~W~~~~g~~l 174 (230)
T 1ypz_F 164 VYWKEKDGNTI 174 (230)
T ss_dssp EEEECTTSSCB
T ss_pred EEEEccCCeEc
Confidence 99998 76544
No 348
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.48 E-value=1.3e-14 Score=136.01 Aligned_cols=178 Identities=15% Similarity=0.073 Sum_probs=100.0
Q ss_pred CeEEEEEEe---------cCcCCee-eeCCCceE-EEcCCeEEEEEEEeccC----CCeEEEEeCCccCCCCCe------
Q psy15127 59 DQWKLIAKE---------ALIKPFP-ISEPSDAT-VLSGSVVEFVCRVGGDP----LPTILWRRDDGKMPTGRA------ 117 (633)
Q Consensus 59 G~Y~C~a~~---------v~~~p~~-~~~~~~~~-~~~G~~~~L~C~~~~~p----~p~i~W~~~~~~i~~~~~------ 117 (633)
|.|.|...+ +..+|.+ +..|.... +..|+.++|.|.+.|.. ...|+|+|+|..+.....
T Consensus 1 ~~~~~~~~~~~~~c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~ 80 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ 80 (240)
T ss_dssp ----------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC
T ss_pred CceeeeeeecCCCCCccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceEC
Confidence 678888777 3334544 45555554 55799999999999863 337999999988743211
Q ss_pred ---EEcccceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEE--EEEeeccccccCCCceEEecCCcEEEEEeCCCCCC
Q psy15127 118 ---KILDDRSLQIENVGPQDEGLYICDVENLVGS--ISLRASL--TVHLLRDDFRAEPKDTRVASGETALLECGPPKGQP 190 (633)
Q Consensus 118 ---~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l--~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 190 (633)
.+...+.|.|.....+|.|.|+|.|.+..+. ..+.+.+ .+..+ |.+.+.+.......|+.+.|.|.+...+|
T Consensus 81 ~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~-P~V~v~~~~~~~~~g~~~~L~C~~~gf~P 159 (240)
T 4acp_A 81 YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPRE-PQVYTLPPSRDELTKNQVSLTCLVKGFYP 159 (240)
T ss_dssp ---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBC-CEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred CCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCC-CEEEEECCChHHhcCCceEEEEEEeEEeC
Confidence 1111246888877788899999999988764 2333332 12233 55544443333345899999999544467
Q ss_pred CC-eEEEEECCEEeccCCCee-EEeccceeeeE---EE-------eeeEEEEeecCCCC
Q psy15127 191 EP-TLHWKKNGQFIDLESSKS-LDLSRRTLGWL---RV-------RPLYWNVARPRANL 237 (633)
Q Consensus 191 ~~-~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~---~~-------~g~y~C~a~~~~~~ 237 (633)
.+ .+.|+++|..+....... ....+..+... .+ .+.|+|.+.+..-.
T Consensus 160 ~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l~ 218 (240)
T 4acp_A 160 SDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 218 (240)
T ss_dssp SCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCCC
Confidence 64 899999999864221111 11112222211 11 26899999887653
No 349
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=114.08 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=80.9
Q ss_pred ccCCCCCCCCceeecCCCCCCCc-chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQ-HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .+.|.+..|..+| ++ ++..++.++|.|+|++| .. +.|++| .|
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~--g~i~~Y-~v 52 (119)
T 2ee2_A 1 GSSGSSGVA-VINSAQDAPSEAPTEV----------------GVKVLSSSEISVHWEHV--------LE--KIVESY-QI 52 (119)
T ss_dssp CCCCCSSCC-CCCCCSCCCCCCCCSC----------------EEEEEETTEEEEECCCC--------SC--TTCCEE-EE
T ss_pred CCCCCCCCE-EEECCCcCCCCCCCcE----------------EEEEccCCEEEEEecCC--------CC--CccceE-EE
Confidence 678888766 5778888777666 55 78889999999999965 22 889999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+..+.... .| ..+...+..++++|.+|++++.|.|+|+|.|.+|.|++|+
T Consensus 53 ~~~~~~~~~~-----~~-----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 104 (119)
T 2ee2_A 53 RYWAAHDKEE-----AA-----NRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSD 104 (119)
T ss_dssp EEEESSSCGG-----GC-----EEEEEETTCSEEEECSCCTTCEEEEEEEEECSSSCCCCCC
T ss_pred EEEECCCccc-----Cc-----EEEEcCCCEeEEEECCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 9988764331 11 1223345678999999999999999999999999999985
No 350
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.48 E-value=6e-14 Score=126.59 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=73.0
Q ss_pred CceEEEcC-CCC--CCeEEEEEEec--------------CcCCee----------------e----eCCCc---eEEEcC
Q psy15127 47 GSVLGARG-ALS--DDQWKLIAKEA--------------LIKPFP----------------I----SEPSD---ATVLSG 86 (633)
Q Consensus 47 ~~~L~i~~-v~~--~G~Y~C~a~~v--------------~~~p~~----------------~----~~~~~---~~~~~G 86 (633)
+++|.|.+ ++. +|.|+|.|.|. ..+|.. . ..... ..+.+|
T Consensus 43 ~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 122 (186)
T 1jbj_A 43 DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGD 122 (186)
T ss_dssp CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSS
T ss_pred CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCC
Confidence 46899999 887 99999999881 011110 0 00001 123499
Q ss_pred CeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 87 SVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 87 ~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
+++.|.|.+ |.|.|+|+|+|..+..... ..+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 123 ~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 123 GSVLLTCGL---TDKTIKWLKDGSIISPLNA---TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CEEEEECSS---SCSCEEEEETTEECCCSSC---CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CeEEEEeeC---CCCeEEEEECCEECcccCC---CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 999999987 7889999999998864322 45789999999999999999999988764
No 351
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.48 E-value=9.7e-14 Score=127.00 Aligned_cols=113 Identities=14% Similarity=0.085 Sum_probs=83.1
Q ss_pred CceEEEcCCCC--CCeEEEEEEe------------cCcCCee-eeCCCceEEEcCCeEEEEEEEecc-CC--CeEEEEeC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE------------ALIKPFP-ISEPSDATVLSGSVVEFVCRVGGD-PL--PTILWRRD 108 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~-~~~~~~~~~~~G~~~~L~C~~~~~-p~--p~i~W~~~ 108 (633)
++.|.|.+++. +|.|+|.|.| |..+|.. ...+. ..+.+|+.++|.|.+.+. |. +.|+|+|+
T Consensus 53 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~ 131 (202)
T 1vca_A 53 TSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKG 131 (202)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEET
T ss_pred ccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeC
Confidence 35799999998 9999999998 3334432 22222 568999999999999875 43 37999999
Q ss_pred CccCCCCCeE--------EcccceEEEccCCCCCCeEEEEEEEeCCce-------EEEEEEEEEEee
Q psy15127 109 DGKMPTGRAK--------ILDDRSLQIENVGPQDEGLYICDVENLVGS-------ISLRASLTVHLL 160 (633)
Q Consensus 109 ~~~i~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-------~s~~~~l~V~~~ 160 (633)
+..+...... ......|.|..+..+|.|.|+|.|.|..+. .+..+.|.|..+
T Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~ 198 (202)
T 1vca_A 132 DHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYIS 198 (202)
T ss_dssp TEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECC
T ss_pred CeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecC
Confidence 9876422110 111245788888889999999999998765 466788888877
No 352
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.48 E-value=7e-14 Score=132.32 Aligned_cols=127 Identities=23% Similarity=0.307 Sum_probs=80.8
Q ss_pred eeCCCceEEEcCCeEEEEEEEec--cCCCeEEEEeCCc--c---C---------------CCCCeEEccc-----ceEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGG--DPLPTILWRRDDG--K---M---------------PTGRAKILDD-----RSLQI 127 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~--~p~p~i~W~~~~~--~---i---------------~~~~~~~~~~-----~~L~i 127 (633)
+..|..+.+.+|++++|.|.+.+ .+...+.|+|... . + ..+|+....+ .+|+|
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQM 82 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 34567788999999999999975 2345799998431 1 0 0134443222 35999
Q ss_pred ccCCCCCCeEEEEEEEeCC----------------------ceEEEEEEEEEEee---ccccccCCCceEEecCCcEEEE
Q psy15127 128 ENVGPQDEGLYICDVENLV----------------------GSISLRASLTVHLL---RDDFRAEPKDTRVASGETALLE 182 (633)
Q Consensus 128 ~~v~~~d~G~Y~C~~~n~~----------------------g~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~ 182 (633)
.+++.+|+|.|.|.+.+.. ......+.|.|... +|.+...+....+..|+.++|.
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~ 162 (248)
T 3u2s_H 83 NSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALG 162 (248)
T ss_dssp CSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEE
T ss_pred CCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEE
Confidence 9999999999999998741 11223356666621 2334333333345679999999
Q ss_pred EeCCCCCC-CCeEEEEECCE
Q psy15127 183 CGPPKGQP-EPTLHWKKNGQ 201 (633)
Q Consensus 183 C~~~~~~p-~~~i~W~~~~~ 201 (633)
|.+....| ...+.|++++.
T Consensus 163 C~~~~~~P~~~~v~W~~~g~ 182 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGAL 182 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTB
T ss_pred EEEeeEECCCeEEEEeECCc
Confidence 99655466 45899998875
No 353
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.48 E-value=2.4e-13 Score=108.65 Aligned_cols=90 Identities=31% Similarity=0.512 Sum_probs=77.8
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC---CCeEEccc---ceEEEccCCCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT---GRAKILDD---RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~---~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.+|.+...+..+.+.+|+.+.|.|.+.+.|.|.+.|+|++..+.. .+.....+ ..|.|.+++.+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 467888888889999999999999999999999999999998853 34444433 679999999999999999999
Q ss_pred eCCceEEEEEEEEEEe
Q psy15127 144 NLVGSISLRASLTVHL 159 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~ 159 (633)
|..|..+..+.|.|..
T Consensus 84 n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999988888888864
No 354
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.48 E-value=3.1e-13 Score=120.73 Aligned_cols=138 Identities=12% Similarity=0.057 Sum_probs=90.2
Q ss_pred CCCCCCCccccccce-eeEEEEeccc----CCCCCceEEeeCceEEEcCCCC--CCeEEEEEEecCc-----CC---eee
Q psy15127 11 HPMSSPRAEIEPATR-TNRVSISGDP----GFDSRRSRSIFGSVLGARGALS--DDQWKLIAKEALI-----KP---FPI 75 (633)
Q Consensus 11 ~~~~~~~~~i~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~v~~-----~p---~~~ 75 (633)
+++..+...|.|+.. +......-.+ ...+.|+.+..+|+|.|.+++. +|.|+|.|.|... .. .+.
T Consensus 24 ~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~ 103 (182)
T 1hnf_A 24 FQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQ 103 (182)
T ss_dssp CCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred ccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEc
Confidence 344456667886551 2221111100 0245788888899999999998 9999999988111 11 111
Q ss_pred eCC-CceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEE
Q psy15127 76 SEP-SDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRAS 154 (633)
Q Consensus 76 ~~~-~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~ 154 (633)
... .......+..++|.|.+.+.|.+.|+|+++|..+ . .....|.+.. ..+|+|.|+|.|.|..+..+....
T Consensus 104 ~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~-----~~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~ 176 (182)
T 1hnf_A 104 ERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHL-K-----LSQRVITHKW-TTSLSAKFKCTAGNKVSKESSVEP 176 (182)
T ss_dssp CCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEE-E-----EESSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEE
T ss_pred CcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEEC-C-----CCCcEEEEec-ccCCCcEEEEEEEeCCCCcEEcce
Confidence 111 1112223457999999998889999999999877 1 1233455433 578999999999999998766655
Q ss_pred E
Q psy15127 155 L 155 (633)
Q Consensus 155 l 155 (633)
+
T Consensus 177 ~ 177 (182)
T 1hnf_A 177 V 177 (182)
T ss_dssp E
T ss_pred e
Confidence 5
No 355
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.48 E-value=1.8e-13 Score=127.97 Aligned_cols=112 Identities=13% Similarity=0.192 Sum_probs=80.3
Q ss_pred ceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEEec-cCCCeEEEEeCCc-cCC
Q psy15127 48 SVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRVGG-DPLPTILWRRDDG-KMP 113 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~-~p~p~i~W~~~~~-~i~ 113 (633)
.+|.|.+++. +|.|+|.|.| +..++.+...+....+.+|+.+.|.|.+.+ .|.|.|+|+|++. .+.
T Consensus 83 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 83 AALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred EEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 4799999998 9999999999 222333333444567889999999999987 5999999999654 444
Q ss_pred CCC--eEEcccc---eEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 114 TGR--AKILDDR---SLQIENVGPQDEGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 114 ~~~--~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
... .....++ .+.+.+++.+|+|.|+|.|.|..|..++.+.|.|.+
T Consensus 163 ~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 163 TVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred CCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 322 2222233 244557889999999999999999998888888865
No 356
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.47 E-value=1.5e-13 Score=122.02 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=81.9
Q ss_pred ceEEEcCCCC--CCeEEEEEEe----------cCcCCeeeeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCC
Q psy15127 48 SVLGARGALS--DDQWKLIAKE----------ALIKPFPISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPT 114 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~ 114 (633)
+.|.|.+++. +|.|+|.+.+ +..+|.+.. +....+.+|+.+.|.|.+. +.|.+.+.|+|+|..+..
T Consensus 51 ~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (170)
T 3ry4_A 51 QPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF 129 (170)
T ss_dssp SSEEEEECCGGGCEEEEEEETTSBCCCCEEEEEECCSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE
T ss_pred cceEEEecccccCeEEEEEEeCCCceEeEEEEEECCceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc
Confidence 4577788887 9999999987 344444444 4456788999999999994 556789999999987632
Q ss_pred CCeEEcccceEEEccCCCCCCeEEEEEEEeCCce-EEEEEEEEE
Q psy15127 115 GRAKILDDRSLQIENVGPQDEGLYICDVENLVGS-ISLRASLTV 157 (633)
Q Consensus 115 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~~~~l~V 157 (633)
...++.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 130 ----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 130 ----SHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp ----ESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ----cCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 223568999999999999999999999887 555666665
No 357
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.7e-13 Score=112.05 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=78.1
Q ss_pred cCcCCeeee---CCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcc---cceEEEccCCCCCCeEEEEE
Q psy15127 68 ALIKPFPIS---EPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILD---DRSLQIENVGPQDEGLYICD 141 (633)
Q Consensus 68 v~~~p~~~~---~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~ 141 (633)
+..+|.|.. .+..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+..++..+.. ...|.|.+++.+|+|.|+|.
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEE
Confidence 445677754 356788999999999999999999999999999998755444332 24599999999999999999
Q ss_pred EEeCCceEEEEEEEEEEee
Q psy15127 142 VENLVGSISLRASLTVHLL 160 (633)
Q Consensus 142 ~~n~~g~~s~~~~l~V~~~ 160 (633)
|.|..|..+..+.|.|...
T Consensus 98 a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp EECSSCEECCEEEEEEECC
T ss_pred EEeCCCeEEEEEEEEEEcC
Confidence 9999999889999999876
No 358
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.47 E-value=2.9e-13 Score=107.71 Aligned_cols=84 Identities=27% Similarity=0.446 Sum_probs=69.7
Q ss_pred eeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEcc---CceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 248 SLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 248 ~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
..+.+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ...++.+.. ..+|.|.++..+|+|.|+|.|.|..|..
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~---~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ---EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT---GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee---ccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 4466788999999999999999999999999987522 223343332 2379999999999999999999999999
Q ss_pred EEEEEEEEEe
Q psy15127 325 TVRAFLQVRE 334 (633)
Q Consensus 325 ~~~~~l~v~~ 334 (633)
+.++.|.|+.
T Consensus 90 ~~~~~l~V~~ 99 (100)
T 3knb_A 90 SATVNIHIRS 99 (100)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEE
Confidence 9999998874
No 359
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.47 E-value=5.8e-14 Score=128.01 Aligned_cols=99 Identities=11% Similarity=0.066 Sum_probs=67.2
Q ss_pred CceEEEcCCCC--CCeEEEEEEe--------------cCc---CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEe
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE--------------ALI---KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRR 107 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~--------------v~~---~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~ 107 (633)
++.|.|.+++. +|.|+|.|.| +.. +|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k 134 (196)
T 2d3v_A 57 KARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTE 134 (196)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEE
T ss_pred ccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEc
Confidence 46799999998 9999999977 212 45665444 35788999999999999888 8999999
Q ss_pred CCccCCCCCeE--Ec----ccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 108 DDGKMPTGRAK--IL----DDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 108 ~~~~i~~~~~~--~~----~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
+|..+...... .. ..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 135 EGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp C---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 99877432111 11 126899999999999999999999765
No 360
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=7.5e-14 Score=115.66 Aligned_cols=104 Identities=20% Similarity=0.179 Sum_probs=84.4
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVN 572 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~ 572 (633)
|.|++|... .++|.+..|.+|.++ ++..++.++|.|+|++| ...+|.|.+| .|+
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~ 54 (119)
T 1wfn_A 1 GSSGSSGPQ-LVRTHEDVPGPVGHL----------------SFSEILDTSLKVSWQEP--------GEKNGILTGY-RIS 54 (119)
T ss_dssp CCCCCSCCC-SCCSSCCSCCCCSCC----------------EEESCCSSEEEEECCCC--------TTCCSCCCEE-EEE
T ss_pred CCCCCCCCE-EEECCCCCCCCCCce----------------EEEECCCCEEEEEEcCC--------CCCCCcEEEE-EEE
Confidence 678888776 578888888888777 88889999999999965 4578889999 999
Q ss_pred EEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 573 LRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+..+... .|. ........++++|.+|++++.|.|+|+|.|.+|.|++|+
T Consensus 55 ~~~~~~~~------~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 104 (119)
T 1wfn_A 55 WEEYNRTN------TRV-----THYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSA 104 (119)
T ss_dssp EEESSCGG------GCC-----CEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEE
T ss_pred EEECCCCC------ceE-----EEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 99876432 011 122346788999999999999999999999999999874
No 361
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=5e-13 Score=109.52 Aligned_cols=89 Identities=24% Similarity=0.261 Sum_probs=73.0
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEecc---CCCeEEEEeCCccC----CCCCeEEc---------ccceEEEccCCCCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGD---PLPTILWRRDDGKM----PTGRAKIL---------DDRSLQIENVGPQD 134 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~---p~p~i~W~~~~~~i----~~~~~~~~---------~~~~L~i~~v~~~d 134 (633)
.|.|+..|.++.+.+|+.++|.|.+.+. |.|.|.|+|+.... ...+..+. .+..|+|.+++.+|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 3678899999999999999999999764 89999999974211 01222221 13689999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 135 EGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
+|.|+|+|.|..|..++.+.|+|.+
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999999999999999998
No 362
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.46 E-value=1.4e-13 Score=111.90 Aligned_cols=93 Identities=25% Similarity=0.501 Sum_probs=70.6
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeE-E-cccceEEEccCCCCCCeEEEEEEEeC
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAK-I-LDDRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~-~-~~~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|++..+...... . ..++.|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 7 ERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp ----CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC--
T ss_pred ccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeC
Confidence 346788888899999999999999999999999999999999988654322 2 24578999999999999999999999
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
.|..+..+.|.|..+
T Consensus 87 ~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 87 LGCAKVEAFFIIEGA 101 (108)
T ss_dssp --CEEEEEEEEEEC-
T ss_pred CCceEEEEEEEEeCC
Confidence 999999999999887
No 363
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=114.04 Aligned_cols=108 Identities=10% Similarity=-0.010 Sum_probs=80.9
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeee-ecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELI-PTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .++|.+..|..+|..+ ++. ..++++|.|+|++| .....+|.|++| .|
T Consensus 1 G~g~~S~~v-~~~T~~~~P~~~P~~~---------------~~~~~~s~~sv~l~W~pp------~~~~~~g~i~~Y-~v 57 (124)
T 2dbj_A 1 GSSGSSGWI-LASTTEGAPSVAPLNV---------------TVFLNESSDNVDIRWMKP------PTKQQDGELVGY-RI 57 (124)
T ss_dssp CCSCCCCCC-CCCCSSCCCCSCCEEE---------------EEEECSSSSEEEEEEECC------SCCSTTCCEEEE-EE
T ss_pred CcCCCCCCE-EEEccCCCCCCCCcce---------------EEEecCCCCEEEEEEcCC------CcccCCCeEeEE-EE
Confidence 678888776 5778888777555432 666 57899999999943 224578899999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+...... ...|.. . .....++++|.+|++++.|.|+|+|.|.+|.|++|+
T Consensus 58 ~~~~~~~~~----~~~~~~----~--~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~ 109 (124)
T 2dbj_A 58 SHVWQSAGI----SKELLE----E--VGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSD 109 (124)
T ss_dssp EEEEEETTE----EEEEEE----E--EESTTSCEEEECCCSSSEEEECEEEEESSCBCCCCC
T ss_pred EEEECCCCC----ccceEE----E--eCCCcceEEecCCCCCCEEEEEEEEECCCccCCCCC
Confidence 997543321 123421 1 234678999999999999999999999999999985
No 364
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.46 E-value=8.8e-14 Score=130.46 Aligned_cols=114 Identities=16% Similarity=0.216 Sum_probs=85.1
Q ss_pred EeeCceEEEcCCCC--CCeEEEEEEe-------------cCcC---CeeeeCCCceEEEcCCeE-EEEEEE-eccCCCeE
Q psy15127 44 SIFGSVLGARGALS--DDQWKLIAKE-------------ALIK---PFPISEPSDATVLSGSVV-EFVCRV-GGDPLPTI 103 (633)
Q Consensus 44 ~~~~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~---p~~~~~~~~~~~~~G~~~-~L~C~~-~~~p~p~i 103 (633)
+..++.|.|.+++. +|.|+|.|.+ +..+ |.+...+....+.+|+.+ .|.|.+ .+.|.|.+
T Consensus 73 ~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i 152 (231)
T 2pet_A 73 LDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKI 152 (231)
T ss_dssp ECTTCCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEE
T ss_pred cCCCceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEE
Confidence 56667899999998 9999999987 2222 566666777777799988 999999 89999999
Q ss_pred EEEeCCccCCCCC-----eEEcc------------cceEEEccCCCCCCeEEEEEEEeC-----Cce-EEEEEEEEE
Q psy15127 104 LWRRDDGKMPTGR-----AKILD------------DRSLQIENVGPQDEGLYICDVENL-----VGS-ISLRASLTV 157 (633)
Q Consensus 104 ~W~~~~~~i~~~~-----~~~~~------------~~~L~i~~v~~~d~G~Y~C~~~n~-----~g~-~s~~~~l~V 157 (633)
.|+|++..+.... ..+.. .+.|.|.....+|+|.|+|.|.|. .+. .+..+.|.|
T Consensus 153 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 153 TWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp EEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred EEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 9999999886443 22211 156888766666799999999994 444 444455544
No 365
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.46 E-value=5.2e-14 Score=130.23 Aligned_cols=146 Identities=14% Similarity=0.173 Sum_probs=97.0
Q ss_pred cCCCCCCCCCCcccccccee----eEEEEecc---cCCCCCceEEe---eCceEEEcCCCC--CCeEEEEEEe-------
Q psy15127 7 TNHAHPMSSPRAEIEPATRT----NRVSISGD---PGFDSRRSRSI---FGSVLGARGALS--DDQWKLIAKE------- 67 (633)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~----~~~~~~~~---~~~~~~~~~~~---~~~~L~i~~v~~--~G~Y~C~a~~------- 67 (633)
+.|.+. +.|.+.|.|+... ....+... ......|+.+. .+++|.|.+++. +|.|+|.|.+
T Consensus 20 L~C~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~ 98 (213)
T 3mj8_L 20 ITCSGD-KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWV 98 (213)
T ss_dssp EEEECS-STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEE
T ss_pred EEEEcC-CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeE
Confidence 334433 4567788876521 11111111 11123455533 245799999998 9999999987
Q ss_pred --------cC----cCCeeeeCCCceEEEcCCeEEEEEEEecc-CC-CeEEEEeCCccCCCCC---------eEEcccce
Q psy15127 68 --------AL----IKPFPISEPSDATVLSGSVVEFVCRVGGD-PL-PTILWRRDDGKMPTGR---------AKILDDRS 124 (633)
Q Consensus 68 --------v~----~~p~~~~~~~~~~~~~G~~~~L~C~~~~~-p~-p~i~W~~~~~~i~~~~---------~~~~~~~~ 124 (633)
|. .+|.+...+....+.+|+.++|.|.+.+. |. +.|.|+|+|..+..+. ......+.
T Consensus 99 ~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~ 178 (213)
T 3mj8_L 99 FGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSY 178 (213)
T ss_dssp EBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEE
T ss_pred EcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEE
Confidence 22 45666555555445579999999999875 44 4899999999885421 11112356
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceEEEEE
Q psy15127 125 LQIENVGPQDEGLYICDVENLVGSISLRA 153 (633)
Q Consensus 125 L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~ 153 (633)
|.|.+++.+|+|.|+|.|.|..+...+.+
T Consensus 179 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 179 LTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred EEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 99999999999999999999987665554
No 366
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=7.7e-14 Score=111.51 Aligned_cols=79 Identities=25% Similarity=0.269 Sum_probs=64.1
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
.+.. ..+++.|+|++| .++++.|++| +|+|+. ... .|...+.. .....++|++.+|.++
T Consensus 15 ~v~~-~~~sv~L~W~pP--------~~~~~~I~gY-~vey~~-~~~-------~W~~~~~~---~~~~~t~~~v~~L~pg 73 (108)
T 1v5j_A 15 VAVR-TPRGVLLHWDPP--------ELVPKRLDGY-VLEGRQ-GSQ-------GWEVLDPA---VAGTETELLVPGLIKD 73 (108)
T ss_dssp EEEE-CSSSEEEEEECC--------SCCSSCCCBE-EEEEEE-TTC-------CCEEEEEE---ECSSCCEEECCCCCTT
T ss_pred EEEE-eCCEEEEEECCC--------CCCCCCCcEE-EEEEEe-CCC-------CcEEeeee---cCCCcCEEEeCCCCCC
Confidence 4544 467899999965 4578999999 999998 332 48754422 3467899999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|||.|.|..|.|+||+
T Consensus 74 ~~Y~FRV~A~n~~G~s~pS~ 93 (108)
T 1v5j_A 74 VLYEFRLVAFAGSFVSDPSN 93 (108)
T ss_dssp SCEECCBEEEETTEEEEECS
T ss_pred CEEEEEEEEEcCCCCcCCCC
Confidence 99999999999999999996
No 367
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.45 E-value=3.4e-14 Score=130.18 Aligned_cols=109 Identities=14% Similarity=0.202 Sum_probs=79.1
Q ss_pred eCceEEEcCCCC--CCeEEEEEEecC-------c---------------------------------CCeeeeCCCceEE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKEAL-------I---------------------------------KPFPISEPSDATV 83 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~v~-------~---------------------------------~p~~~~~~~~~~~ 83 (633)
.+++|.|.+++. +|.|+|.+.+.. . ++.+ ..++....
T Consensus 47 ~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~v~ 125 (204)
T 1sy6_A 47 DKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGI-TQTPYKVS 125 (204)
T ss_dssp SCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC-------------------------------------CCCCEEE
T ss_pred CCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEeccccccccccccccccccccccccccccccccce-ecCCceee
Confidence 356899999988 999999986511 0 1112 22222223
Q ss_pred EcCCeEEEEEEEeccCCCeEEEEeCCccCCCC---CeEEcccceEEEccC-CCCCCeEEEEEEEeCCce-EEEEEEEEE
Q psy15127 84 LSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG---RAKILDDRSLQIENV-GPQDEGLYICDVENLVGS-ISLRASLTV 157 (633)
Q Consensus 84 ~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~---~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~n~~g~-~s~~~~l~V 157 (633)
.+|++++|.|. +.|.|.|+|+|++..+... ......++.|.|.++ +.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 39999999998 7888999999999887542 233335789999999 999999999999999986 355555554
No 368
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.45 E-value=5.4e-13 Score=108.19 Aligned_cols=89 Identities=25% Similarity=0.324 Sum_probs=72.8
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCC---CeEEEEeCCccCC----CCCeEEc---------ccceEEEccCCCC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPL---PTILWRRDDGKMP----TGRAKIL---------DDRSLQIENVGPQ 133 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~---p~i~W~~~~~~i~----~~~~~~~---------~~~~L~i~~v~~~ 133 (633)
..|.|+..|..+.+.+|++++|.|.+.|.|. |.|+|+|++.... ..+.... ....|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4588889999999999999999999999988 9999999873211 1222221 1358999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 134 DEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 134 d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
|+|.|+|.|.|..|..++.+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999886
No 369
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.45 E-value=6e-13 Score=107.28 Aligned_cols=82 Identities=28% Similarity=0.415 Sum_probs=68.5
Q ss_pred eeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cCceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 248 SLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 248 ~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
..+.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+.. ..++.+. ...+|.|.++..+|+|.|+|.|.|..|..
T Consensus 21 ~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 95 (107)
T 3knb_B 21 RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA-----SERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEA 95 (107)
T ss_dssp CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-----CSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccc-----eeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEE
Confidence 345677899999999999999999999999998752 1233332 23479999999999999999999999999
Q ss_pred EEEEEEEEEe
Q psy15127 325 TVRAFLQVRE 334 (633)
Q Consensus 325 ~~~~~l~v~~ 334 (633)
+.++.|.|.+
T Consensus 96 ~~~~~l~V~~ 105 (107)
T 3knb_B 96 YAAAAVTVLE 105 (107)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEc
Confidence 9999999875
No 370
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=2.5e-13 Score=110.74 Aligned_cols=92 Identities=29% Similarity=0.455 Sum_probs=79.7
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCC--CCeEEcc--cc--eEEEccCCCCCCeEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPT--GRAKILD--DR--SLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~--~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~~ 142 (633)
..+|.|...+....+.+|+.++|.|.+.+.|.+.|.|+|++..+.. .++.+.. ++ .|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3578888889999999999999999999999999999999998864 3333332 22 6999999999999999999
Q ss_pred EeCCceEEEEEEEEEEee
Q psy15127 143 ENLVGSISLRASLTVHLL 160 (633)
Q Consensus 143 ~n~~g~~s~~~~l~V~~~ 160 (633)
.|..|..+..+.|.|..+
T Consensus 86 ~N~~g~~~~~~~l~V~~~ 103 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAV 103 (110)
T ss_dssp ECTTCCEEECCCEEEECC
T ss_pred EECCCeEEEEEEEEEECC
Confidence 999999999999999876
No 371
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.45 E-value=3.7e-13 Score=128.00 Aligned_cols=134 Identities=17% Similarity=0.243 Sum_probs=92.2
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--c---C-------------CCCCeEEcc----cceEEEcc
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--K---M-------------PTGRAKILD----DRSLQIEN 129 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~---i-------------~~~~~~~~~----~~~L~i~~ 129 (633)
+.+...|..+.+.+|++++|.|.+. .+.+.+.|+|+.. . + ..+++.... +..|.|.+
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 3456678889999999999999985 4578899998531 1 0 123444432 35899999
Q ss_pred CCCCCCeEEEEEEEeCC---ceEEEEEEEEEEee-----cccccc-CCCceEEecCCcEEEEEeCCCCCCC-CeEEEEEC
Q psy15127 130 VGPQDEGLYICDVENLV---GSISLRASLTVHLL-----RDDFRA-EPKDTRVASGETALLECGPPKGQPE-PTLHWKKN 199 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~---g~~s~~~~l~V~~~-----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~ 199 (633)
++.+|+|.|.|.+.+.. ......+.|.|... +|.+.+ .+....+.+|+.+.|.|.+....|. +.+.|+++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 99999999999999851 22223345777642 233332 2333344578999999995434575 49999999
Q ss_pred CEEeccC
Q psy15127 200 GQFIDLE 206 (633)
Q Consensus 200 ~~~~~~~ 206 (633)
|..+...
T Consensus 163 g~~l~~~ 169 (252)
T 1oga_E 163 GKEVHSG 169 (252)
T ss_dssp TEEECSS
T ss_pred CEECCCC
Confidence 9987643
No 372
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.45 E-value=1.1e-12 Score=121.99 Aligned_cols=113 Identities=18% Similarity=0.255 Sum_probs=85.5
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-----------cCc---CCeeeeCCCceEEEcCCeEEEEEEE-eccCCCeEEEEe-C
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-----------ALI---KPFPISEPSDATVLSGSVVEFVCRV-GGDPLPTILWRR-D 108 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-----------v~~---~p~~~~~~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~-~ 108 (633)
+++|.|.+++. +|.|+|.+.+ +.. +|.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|++ +
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~ 149 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQ 149 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTT
T ss_pred eEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCC
Confidence 57899999998 9999999997 222 35565554 3467899999999999 788999999999 4
Q ss_pred CccCCCCCeE-E--cccc---eEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 109 DGKMPTGRAK-I--LDDR---SLQIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 109 ~~~i~~~~~~-~--~~~~---~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
+..+...... . ..++ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 150 GVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQ 207 (222)
T ss_dssp SCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-
T ss_pred CccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCC
Confidence 5555432111 1 1222 3889999999999999999999999999999999887
No 373
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.45 E-value=2e-12 Score=130.23 Aligned_cols=185 Identities=9% Similarity=0.075 Sum_probs=115.1
Q ss_pred CCCCCCCcEEEEee-CCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 409 FPGPPAAPVILNTT-RGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 409 ~p~~p~~~~~~~~~-~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
.|.+|.++.+.... ..++.|+|+|+......++.+..|.|+|+..+ ...|+..... . .....++..+..|+|||+
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~-~~~w~~~~~~-~--~~~~~~~~l~~~y~~rV~ 106 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIG-SETWKTIITK-N--LHYKDGFDLNKGIEAXIH 106 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETT-CSSCEEEEES-S--SEEEEECCTTSCEEEEEE
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCC-CCcceEEEec-c--EEEEEeecCCCceEEEEE
Confidence 35678888877665 68999999999863112356899999999876 3568765433 2 234456677999999999
Q ss_pred EEec----cccCCCCCCCCcee--ec-CCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccc
Q psy15127 488 AENS----HGLGIPSPVSPITR--TL-GLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLD 560 (633)
Q Consensus 488 a~n~----~G~g~~s~~~~~~~--t~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~ 560 (633)
|.|. .|.|.+|.++.... +. +.+|.+|.++ +....+.+++.++|+++ .
T Consensus 107 a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl----------------~C~~~~~~~l~csW~p~---------~ 161 (380)
T 3lb6_C 107 TLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDM----------------DCVYYNWQYLLCSWKPG---------I 161 (380)
T ss_dssp EECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEE----------------EEEEETTTEEEEEEECC----------
T ss_pred eecCCcccCCccCccccchhhcccCCCCCCCCCCcEe----------------EEEECCCcEEEEEEcCC---------C
Confidence 9976 78888776653222 23 3344455544 66677889999999953 2
Q ss_pred hhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEee--ccccceeEEEEEecccccccccc
Q psy15127 561 EARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVT--HLRKFTKYEFFLVPFFKTVEGAR 631 (633)
Q Consensus 561 ~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~--~L~~~t~Y~~~v~a~n~~g~g~~ 631 (633)
..+..++| .++|+..+... ..++..+ ....+....+.+. +|.+++.|.|+|.|.|..|.++.
T Consensus 162 ~~~~~~~Y-~l~y~~~~~~~----~~~C~~~----~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s 225 (380)
T 3lb6_C 162 GVLLDTNY-NLFYWYEGLDH----ALQCVDY----IKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRS 225 (380)
T ss_dssp -----CCE-EEEEECTTCSS----CEECSEE----EEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCC
T ss_pred CCCCCccE-EEEEEECCCCc----cccCCCc----cccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeecc
Confidence 23678899 99998765432 0122211 1111233355555 67899999999999999887754
No 374
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.44 E-value=1.1e-12 Score=120.09 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=97.4
Q ss_pred eeEEecCCceEEEEEEEeeecC-----CeeEEEECCEEEEeccCCccceEEEcc------CceEEEcCCCCCCCeEEEEE
Q psy15127 248 SLLIWNHPRVNRLSCFAEGSPL-----PSVFWTQEGSQVLMFPGNAYGHLHVTQ------EGTLRIQGVQKEDAGFFVCS 316 (633)
Q Consensus 248 ~~~~~~~g~~~~l~C~~~g~p~-----~~v~W~~~g~~~~~~~~~~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~ 316 (633)
..+.+..|+++.|.|.+.+.|. +.+.|++++..... ...+..... +.+|.|.+++.+|+|.|+|.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~----~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSL----QSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCC----BCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccc----cCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 3466788999999999999886 79999994443321 112333332 25899999999999999999
Q ss_pred EEeCCceeEEEEEEEEEeccc-----------------------CCCceEEeCCCccccCC-----CC---CceEEeccc
Q psy15127 317 ALSVAGSTTVRAFLQVREFCV-----------------------LPKGTFTLGQPNLATGN-----SD---LRRIACDLR 365 (633)
Q Consensus 317 a~n~~g~~~~~~~l~v~~~~~-----------------------~p~p~~~~~~~~~~~g~-----p~---~~~~i~~~~ 365 (633)
+.|..|..+..+.|.|...+. .|.|.+.|......... .. ..+.+..+.
T Consensus 86 ~~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 165 (202)
T 3bp6_B 86 VICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLK 165 (202)
T ss_dssp EEETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEEC
T ss_pred EEeCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEE
Confidence 999999888888888875321 23334444332211000 00 112456788
Q ss_pred ccCCEEEEEEEEcCCcceeEEEEEEeecC
Q psy15127 366 ETDSGLYTCTASSESGETSWSASLSVEPR 394 (633)
Q Consensus 366 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~~ 394 (633)
.+|.|.|+|.|.|..|..+..+.|.|...
T Consensus 166 ~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 166 PQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp CCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred cCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 89999999999999999988888888654
No 375
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2.3e-13 Score=108.38 Aligned_cols=87 Identities=21% Similarity=0.274 Sum_probs=74.1
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+.++.+.+|+.+.|.|.+ .|.|.++|+|+|..+..+ +..+..+ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 46788889999999999999999999 788999999999998654 4444333 37999999999999999999997
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
..+..+.|.|..+
T Consensus 84 --~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 84 --NVTLPAKVHVISG 96 (100)
T ss_dssp --CCCEEEEEEEECC
T ss_pred --CeeEEEEEEEeCC
Confidence 5567888888877
No 376
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.44 E-value=5.4e-13 Score=121.76 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=79.4
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe---------------cCc---CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE---------------ALI---KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILW 105 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~---------------v~~---~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W 105 (633)
.++.|.|.+++. +|.|+|.|.| |.. +|.+...+ ...+.+|+.++|.|.+.+. .+.++|
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W 133 (198)
T 1ugn_A 56 KKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFIL 133 (198)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEE
T ss_pred cccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEE
Confidence 457899999998 9999999966 111 34554443 3678999999999999887 789999
Q ss_pred EeCCccCCCCCeE--Ec----ccceEEEccCCCCCCeEEEEEEEeCCce-----EEEEEEEEEE
Q psy15127 106 RRDDGKMPTGRAK--IL----DDRSLQIENVGPQDEGLYICDVENLVGS-----ISLRASLTVH 158 (633)
Q Consensus 106 ~~~~~~i~~~~~~--~~----~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-----~s~~~~l~V~ 158 (633)
+|+|..+...... .. ..+.|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 134 ~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 134 CKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 9999877433211 11 1368999999999999999999998652 2556666664
No 377
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.44 E-value=1.1e-13 Score=111.86 Aligned_cols=90 Identities=29% Similarity=0.541 Sum_probs=78.3
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcc---cceEEEccCCCCCCeEEEEEEEe
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILD---DRSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
..+|.|...|..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+ +..... ...|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 45688999999999999999999999999999999999999988654 333332 36899999999999999999999
Q ss_pred CCceEEEEEEEEEE
Q psy15127 145 LVGSISLRASLTVH 158 (633)
Q Consensus 145 ~~g~~s~~~~l~V~ 158 (633)
..|..+..+.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998888888875
No 378
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.44 E-value=2e-12 Score=117.28 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=76.8
Q ss_pred CceEEeeCceEEEcCCCC--CCeEEEEEEe------------cCcC---CeeeeCCCceEEEcCC-eEEEEEEEecc-CC
Q psy15127 40 RRSRSIFGSVLGARGALS--DDQWKLIAKE------------ALIK---PFPISEPSDATVLSGS-VVEFVCRVGGD-PL 100 (633)
Q Consensus 40 ~~~~~~~~~~L~i~~v~~--~G~Y~C~a~~------------v~~~---p~~~~~~~~~~~~~G~-~~~L~C~~~~~-p~ 100 (633)
.|+.+..+++|+|.+++. +|.|+|.+.+ |..+ |.+...+ .....|. .++|.|.+.+. |.
T Consensus 62 ~R~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~ 139 (193)
T 2if7_A 62 KRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDN 139 (193)
T ss_dssp TTEEECTTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTT
T ss_pred ccEEECCCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCc
Confidence 366677789999999998 9999999988 2111 3333333 1234565 89999999984 58
Q ss_pred CeEEEEeCCccCCCCCeEEcccceEEEccCCCC-CCeEEEEEEEeCCceEEEEE
Q psy15127 101 PTILWRRDDGKMPTGRAKILDDRSLQIENVGPQ-DEGLYICDVENLVGSISLRA 153 (633)
Q Consensus 101 p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~-d~G~Y~C~~~n~~g~~s~~~ 153 (633)
|.|+|+|+|..+.. ...|.|.....+ |+|.|+|.|.|..|..+..+
T Consensus 140 p~i~W~~~g~~l~~-------~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 140 VSFRWEALGNTLSS-------QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp CEEEEEETTEEEES-------SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred eEEEEEeCCEEcCC-------CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 89999999876532 346777655554 89999999999999876544
No 379
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.43 E-value=4.2e-13 Score=135.51 Aligned_cols=128 Identities=16% Similarity=0.175 Sum_probs=87.5
Q ss_pred eCCCceE-EEcCCeEEEEEEEecc-CCC---eEEEEeCCccCCCC---------CeEEcccceEEEccCCCCCCeEEEEE
Q psy15127 76 SEPSDAT-VLSGSVVEFVCRVGGD-PLP---TILWRRDDGKMPTG---------RAKILDDRSLQIENVGPQDEGLYICD 141 (633)
Q Consensus 76 ~~~~~~~-~~~G~~~~L~C~~~~~-p~p---~i~W~~~~~~i~~~---------~~~~~~~~~L~i~~v~~~d~G~Y~C~ 141 (633)
..|.... +..|++++|.|.+.+. |.| .|+|+|++..+... .........|.|.+++.+|+|.|+|.
T Consensus 172 ~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~ 251 (376)
T 2aty_A 172 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 251 (376)
T ss_pred eCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEE
Confidence 3343334 7899999999999887 333 69999998765321 01111234799999999999999999
Q ss_pred EEeCCceEEEEEEE----EEEeeccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEEEECCEEec
Q psy15127 142 VENLVGSISLRASL----TVHLLRDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHWKKNGQFID 204 (633)
Q Consensus 142 ~~n~~g~~s~~~~l----~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W~~~~~~~~ 204 (633)
+.+..+.......+ .+..+ |.+.+.+.......|+.++|.|.+...+| ...|.|+|||..+.
T Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~-P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 318 (376)
T 2aty_A 252 VNSAAFPAPIEKTISKTKGRPKA-PQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 318 (376)
T ss_pred EecCCCCCceEEEEcCCCCCCcC-CeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECC
Confidence 99876643222222 33334 66666665555556899999999543355 46999999988653
No 380
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.43 E-value=2.9e-13 Score=125.39 Aligned_cols=113 Identities=12% Similarity=0.170 Sum_probs=87.1
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------c-CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------A-LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG 110 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v-~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~ 110 (633)
+++|.|.+++. +|.|.|.+.+ + ..++.....+....+.+|+.+.|.|.+.+.|.|.|+|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVK 157 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSC
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCc
Confidence 46799999998 9999999987 1 122333344455667789999999999999999999999998
Q ss_pred cCCCCCeEEcc-----cceEEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy15127 111 KMPTGRAKILD-----DRSLQIENVGPQDEGLYICDVENLVGSISLRASLTVHL 159 (633)
Q Consensus 111 ~i~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~ 159 (633)
.+......... .+.|.|.++..+|+|.|+|.|.|..|..+..+.+.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 158 GTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp CEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCE
T ss_pred ccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEE
Confidence 77543222221 24799999999999999999999998876666665543
No 381
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.8e-13 Score=111.60 Aligned_cols=92 Identities=32% Similarity=0.543 Sum_probs=79.9
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCe-EE--ccc--ceEEEccCCCCCCeEEEEEEE
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRA-KI--LDD--RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~-~~--~~~--~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
..+|.|...+..+.+.+|+.++|.|.+.+.|.+.|.|+|++..+..... .. ..+ ..|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 3578999999999999999999999999999999999999998865432 21 122 389999999999999999999
Q ss_pred eCCceEEEEEEEEEEee
Q psy15127 144 NLVGSISLRASLTVHLL 160 (633)
Q Consensus 144 n~~g~~s~~~~l~V~~~ 160 (633)
|..|..+..+.|.|..+
T Consensus 87 n~~g~~~~~~~l~V~~~ 103 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAK 103 (110)
T ss_dssp CSSCEEEECCEEEEECC
T ss_pred CCCCEEEEEEEEEEeCC
Confidence 99999999999999886
No 382
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.43 E-value=2.1e-12 Score=114.01 Aligned_cols=123 Identities=17% Similarity=0.263 Sum_probs=90.5
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCe-EEEEeCCccCCCCCeEE----cccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPT-ILWRRDDGKMPTGRAKI----LDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~-i~W~~~~~~i~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
+...|+...+.+|+++.|.|.+.. +.|. +.|.-. + .+... .....|.|.+++. | |.|.|.+......
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~---l--~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~ 73 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETP---L--PKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQ 73 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECS-SSCSEEEEECS---S--CEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCE
T ss_pred eEEECCCcEEeCCCCEEEEEEccC-CCCccceEEee---C--CCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCc
Confidence 345677788999999999999964 4554 777631 1 11111 1124689999984 4 9999999766556
Q ss_pred EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCC--eEEEEECCEEec
Q psy15127 149 ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEP--TLHWKKNGQFID 204 (633)
Q Consensus 149 ~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~~ 204 (633)
.++.+.|.|..+|..+.+.+....+.+|+.++|.|.+..+.|.. .|.|+|++..+.
T Consensus 74 ~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~ 131 (185)
T 1iam_A 74 STAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELK 131 (185)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEE
T ss_pred eEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcc
Confidence 88999999999866677777777789999999999966667764 478888877664
No 383
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.43 E-value=4.2e-13 Score=107.13 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=63.4
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
.+..+++++|.|+|++| .....+|.|+|| .|.|++.+.... ..|. .+.+.+..++++|.+|+|+
T Consensus 12 ~~~~~s~tsi~v~W~~p------~~~~~ng~i~gY-~v~y~~~~~~~~----~~~~-----~~~v~~~~~~~~l~~L~p~ 75 (102)
T 3n1f_C 12 YTEAVSDTQIMLKWTYI------PSSNNNTPIQGF-YIYYRPTDSDND----SDYK-----RDVVEGSKQWHMIGHLQPE 75 (102)
T ss_dssp EEEECSSSCEEEEEECC------C-----CCCCEE-EEEEEETTCCCG----GGCE-----EEEEETTCSEEEECSCCTT
T ss_pred EEEEcCCCEEEEEeECC------ChhhcCCccceE-EEEEEECCCCCC----CceE-----EEEEcCCceEEECCCCCCC
Confidence 78899999999999944 333478999999 999998764310 1232 2223345778999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|+|.+|.|++|+
T Consensus 76 t~Y~v~V~A~n~~G~G~~S~ 95 (102)
T 3n1f_C 76 TSYDIKMQCFNEGGESEFSN 95 (102)
T ss_dssp CEEEEEEEEEETTEECCCCC
T ss_pred CEEEEEEEEECCCcCCCCCC
Confidence 99999999999999999985
No 384
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.43 E-value=5.2e-13 Score=125.01 Aligned_cols=121 Identities=19% Similarity=0.290 Sum_probs=79.3
Q ss_pred eCCCceEEEcCCeEEEEEEEec--cCCCeEEEEeCCc--c---C---------------CCCCeEEccc-----ceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGG--DPLPTILWRRDDG--K---M---------------PTGRAKILDD-----RSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~--~p~p~i~W~~~~~--~---i---------------~~~~~~~~~~-----~~L~i~ 128 (633)
.+|+.+.+.+|++++|.|.+.+ .....+.|+|... . + ..+|+....+ ..|+|.
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (230)
T 3n9g_H 5 VQSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELS 84 (230)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 4455788999999999999975 2345799998421 1 0 0134443322 249999
Q ss_pred cCCCCCCeEEEEEEEeCC-----c---eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEEE
Q psy15127 129 NVGPQDEGLYICDVENLV-----G---SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLHW 196 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~-----g---~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~W 196 (633)
+++.+|+|.|.|.+.+.. + .....+.|.|... +|.+...+....+..|+.++|.|.+....| ...+.|
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 85 SLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 164 (230)
T ss_dssp SCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE
T ss_pred CCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE
Confidence 999999999999998753 1 1223456777521 233333233334568999999999644455 457889
No 385
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.43 E-value=2.2e-13 Score=129.21 Aligned_cols=145 Identities=13% Similarity=0.081 Sum_probs=83.3
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-----------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEE
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-----------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTIL 104 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-----------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~ 104 (633)
++.|.|.+++. +|.|+|.+.+ | ..+|.+...|. ..+.+|++++|.|.+.+. .+.+.
T Consensus 61 ~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~ 138 (257)
T 1b6u_A 61 KANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYH 138 (257)
T ss_dssp EEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEE
T ss_pred eEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEE
Confidence 46799999998 9999999964 1 23456665554 357899999999998765 46899
Q ss_pred EEeCCccCCCCCe-EEc----ccceEEEccCCCCCCeEEEEEEEeCCc-----eEEEEEEEEEEeeccccccC-CCceEE
Q psy15127 105 WRRDDGKMPTGRA-KIL----DDRSLQIENVGPQDEGLYICDVENLVG-----SISLRASLTVHLLRDDFRAE-PKDTRV 173 (633)
Q Consensus 105 W~~~~~~i~~~~~-~~~----~~~~L~i~~v~~~d~G~Y~C~~~n~~g-----~~s~~~~l~V~~~~p~~~~~-~~~~~~ 173 (633)
|+|+|..+..... ... ....|.|.+++ |+|.|+|.+.+... ..+..+.|.|... |.+..+ |.....
T Consensus 139 w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~-p~~~~p~~~~~~~ 215 (257)
T 1b6u_A 139 LSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN-PSNSWPSPTEPSS 215 (257)
T ss_dssp EEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC-C------------
T ss_pred EEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc-CCCCCCCCcccCc
Confidence 9999987743211 111 24689999998 99999999996532 2467788889887 554422 223355
Q ss_pred ecCCcEEEEEeCCCCCCCCeEEEEE
Q psy15127 174 ASGETALLECGPPKGQPEPTLHWKK 198 (633)
Q Consensus 174 ~~g~~~~l~C~~~~~~p~~~i~W~~ 198 (633)
..|..+.|.|. .|.+.+.+.|..
T Consensus 216 ~~g~~~~l~~~--~~~~~~~~~~~~ 238 (257)
T 1b6u_A 216 ETGNPRHLHAA--AEQKLISEEDLN 238 (257)
T ss_dssp -------------------------
T ss_pred cCCCeEEEEEE--EcchHHHHHHhh
Confidence 67999999987 577778888864
No 386
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.7e-13 Score=110.94 Aligned_cols=90 Identities=22% Similarity=0.267 Sum_probs=73.3
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEecc---CCCeEEEEeCCc-cCCC---CCeEEc---------ccceEEEccCCCCC
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGD---PLPTILWRRDDG-KMPT---GRAKIL---------DDRSLQIENVGPQD 134 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~---p~p~i~W~~~~~-~i~~---~~~~~~---------~~~~L~i~~v~~~d 134 (633)
.+.|+..|.++.+.+|+.++|.|.+.+. |.|.|.|+|+.. .+.. .++.+. .+..|+|.+++.+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4668888999999999999999999874 789999999742 1211 122221 13689999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 135 EGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
+|.|+|.|.|..|..++.+.|.|.++
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999999999875
No 387
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.42 E-value=1.3e-12 Score=103.62 Aligned_cols=87 Identities=23% Similarity=0.335 Sum_probs=73.8
Q ss_pred eeeeCCCceEEEcCCeEEEEEEEecc-CCCeEEEEeCCccCCCCC-eEE-cccc--eEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 73 FPISEPSDATVLSGSVVEFVCRVGGD-PLPTILWRRDDGKMPTGR-AKI-LDDR--SLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 73 ~~~~~~~~~~~~~G~~~~L~C~~~~~-p~p~i~W~~~~~~i~~~~-~~~-~~~~--~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
.+...|.++.+.+|+.+.|.|.+.+. |.|.+.|+|++..+..+. ... ..++ .|.|.+++.+|+|.|+|.|.|..|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 45567788999999999999999997 899999999999886543 332 2333 899999999999999999999999
Q ss_pred eEEEEEEEEEEe
Q psy15127 148 SISLRASLTVHL 159 (633)
Q Consensus 148 ~~s~~~~l~V~~ 159 (633)
..+..+.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 988888888864
No 388
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.42 E-value=4.2e-13 Score=107.63 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=71.6
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeE-E-c---c----cceEEEccCCCCCCeEE
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAK-I-L---D----DRSLQIENVGPQDEGLY 138 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~-~-~---~----~~~L~i~~v~~~d~G~Y 138 (633)
|..+|.+..-.. ...|+.+.|.|.+.|.|.|.++|+|+|..+..+... . . . .+.|.|.+++.+|+|.|
T Consensus 1 V~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (103)
T 1wwb_X 1 VHFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDY 77 (103)
T ss_dssp CCCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred CCCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEE
Confidence 345676542221 246789999999999999999999999988765432 1 1 1 23599999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEee
Q psy15127 139 ICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 139 ~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
+|.|.|..|..+..+.|.|..+
T Consensus 78 ~C~A~N~~G~~~~~~~l~V~~~ 99 (103)
T 1wwb_X 78 TLIAKNEYGKDEKQISAHFMGW 99 (103)
T ss_dssp EEEEECSSCEEEEEEEECCSCC
T ss_pred EEEEEeCCCcEeEEEEEEECCC
Confidence 9999999999999999998876
No 389
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.42 E-value=5.7e-13 Score=124.06 Aligned_cols=113 Identities=12% Similarity=0.172 Sum_probs=80.2
Q ss_pred ceEEEcCCCC--CCeEEEEEEe-----------cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeC-CccCC
Q psy15127 48 SVLGARGALS--DDQWKLIAKE-----------ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRD-DGKMP 113 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~-----------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~-~~~i~ 113 (633)
.+|.|.+++. +|.|+|.+.+ |..+|..........+.+|+.++|.|.+.|.|.|.|+|+++ +..+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred EEEEEcCcccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 4799999998 9999999987 22222211111112567899999999999999999999998 55554
Q ss_pred CCCeE-Ec--ccceE---EEccCCCCCCeEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 114 TGRAK-IL--DDRSL---QIENVGPQDEGLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 114 ~~~~~-~~--~~~~L---~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
..... .. .++.+ .+..+..+|+|.|+|.|.|..|.....+.|.|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 160 GKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPEL 212 (222)
T ss_dssp CEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC
T ss_pred CccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCC
Confidence 33211 11 12222 22245679999999999999999999999998865
No 390
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=3.2e-13 Score=110.92 Aligned_cols=102 Identities=16% Similarity=0.091 Sum_probs=78.5
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVN 572 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~ 572 (633)
|.|++|... .++|.+++|..+|..+ ++.. +.++|.|+|++| .....+|.|++| .|.
T Consensus 1 G~G~~S~~v-~~~T~e~~P~~~P~~v---------------~~~~-~~~si~l~W~~p------~~~~~ng~i~gY-~v~ 56 (117)
T 1wj3_A 1 GSSGSSGTV-NVTTKKTPPSQPPGNV---------------VWNA-TDTKVLLNWEQV------KAMENESEVTGY-KVF 56 (117)
T ss_dssp CCCCCCCCC-CCCCSCCCCCCCCCSC---------------BCCE-ETTEEEEECCCC------CCCSSSCCEEEE-EEE
T ss_pred CcCCCCCCE-EEEecCCCCCCCCccE---------------EEEE-eCCEEEEEEcCC------CccccCCceeEE-EEE
Confidence 678888776 5788888888666543 5655 788999999943 334578999999 999
Q ss_pred EEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 573 LRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+..+... + ..+ ....+.+++. |++++.|.|+|+|+|.+|+|++|+
T Consensus 57 y~~~~~~~-------~-----~~~--~~~~~~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~ 102 (117)
T 1wj3_A 57 YRTSSQNN-------V-----QVL--NTNKTSAELV-LPIKEDYIIEVKATTDGGDGTSSE 102 (117)
T ss_dssp EEESSCSS-------C-----EEE--EESSSEEEEE-CCCSSCEEEEEEEEESSCCCCBCC
T ss_pred EEECCCCC-------C-----eEE--eCCCcEEEEE-CCCCCEEEEEEEEECCCccCCCCC
Confidence 98876543 1 111 1235678888 999999999999999999999985
No 391
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.42 E-value=9e-13 Score=103.14 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=69.5
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+.++.+.+|+.++|.|.+.+ +.+.++|+|+|..+..+ +..+..+ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 4678899999999999999999999976 45789999999998654 4444333 47999999999999999999763
Q ss_pred CceEEEEEEEEEEe
Q psy15127 146 VGSISLRASLTVHL 159 (633)
Q Consensus 146 ~g~~s~~~~l~V~~ 159 (633)
...+.|.|.+
T Consensus 83 ----~~sa~L~V~~ 92 (93)
T 1waa_A 83 ----KSAANLKVKE 92 (93)
T ss_dssp ----EEEEEEEEEC
T ss_pred ----cEEEEEEEEc
Confidence 4567777765
No 392
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=5.2e-13 Score=110.67 Aligned_cols=104 Identities=17% Similarity=0.096 Sum_probs=81.1
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeee-ecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELI-PTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .+.|....|.+|... .+. .++.++|.|+|++| ..+++..|++| .|
T Consensus 1 G~s~~S~~~-~~~t~~~~P~~P~~~----------------~~~~~~~~~sv~l~W~~p-------~~~gg~~i~~Y-~v 55 (120)
T 2crm_A 1 GSSGSSGVV-EFTTCPDKPGIPVKP----------------SVKGKIHSHSFKITWDPP-------KDNGGATINKY-VV 55 (120)
T ss_dssp CCCTTCSCC-SCCSCCCCCCCCCCC----------------EEEEEEETTEEEEECCCC-------TTCCSSCCCEE-EE
T ss_pred CCCCCcCCE-EEEeCCCCCCCCCCC----------------EEeeccCCCEEEEEECCC-------CcCCCCeeeEE-EE
Confidence 678888877 466888888877765 454 77899999999965 12235689999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+...... .|... ..+..+.++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 56 ~~~~~~~~~------~~~~~------~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 105 (120)
T 2crm_A 56 EMAEGSNGN------KWEMI------YSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSE 105 (120)
T ss_dssp EEEESSSSC------CCEEE------ECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCC
T ss_pred EEccCCCCc------CCEEE------EeccccEEEECCCCCCCEEEEEEEEEcCCccCCCcc
Confidence 999876522 36533 224588999999999999999999999999999985
No 393
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=1.9e-13 Score=112.97 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=82.5
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVN 572 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~ 572 (633)
|.|.+|... .++|....|.+|..+ .+..++.++|.|+|++| .+.++.|++| .|+
T Consensus 1 G~s~~S~~~-~~~t~~~~P~~P~~~----------------~~~~~~~~sv~l~W~~p--------~~~~~~i~~Y-~v~ 54 (118)
T 1x3d_A 1 GSSGSSGAE-IFTTLSCEPDIPNPP----------------RIANRTKNSLTLQWKAP--------SDNGSKIQNF-VLE 54 (118)
T ss_dssp CCCCCCCCC-CCCCCCSCCCCCCCC----------------EEEEEETTEEEEECCCC--------CCCSSCEEEE-EEE
T ss_pred CCCCCCcCE-EEEcCCCCCcCCCCc----------------EEeccCCCEEEEEECCC--------CCCCCcceEE-EEE
Confidence 677778776 577888888887776 78888999999999965 3557889999 999
Q ss_pred EEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 573 LRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+...... .|... . ....+.++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 55 ~~~~~~~~------~~~~~-----~-~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 103 (118)
T 1x3d_A 55 WDEGKGNG------EFCQC-----Y-MGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSE 103 (118)
T ss_dssp ECTTTSSS------CCEEE-----E-EESCSEEEEESCCTTCEEEEECCEEESSCBCCCCC
T ss_pred EecCCCCC------CeEEe-----e-ccCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCcc
Confidence 98765422 36532 1 12458899999999999999999999999999985
No 394
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.41 E-value=9.7e-14 Score=133.06 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=74.4
Q ss_pred eEEEcCCCCCCeEEEEEEe------------cCcCCee-eeCCCceEEEcCCeEEEEEEEecc-CCC--eEEEEeCCccC
Q psy15127 49 VLGARGALSDDQWKLIAKE------------ALIKPFP-ISEPSDATVLSGSVVEFVCRVGGD-PLP--TILWRRDDGKM 112 (633)
Q Consensus 49 ~L~i~~v~~~G~Y~C~a~~------------v~~~p~~-~~~~~~~~~~~G~~~~L~C~~~~~-p~p--~i~W~~~~~~i 112 (633)
.|.|.+++..|.|+|.+.. +..+|.. ...+....+.+|+.++|.|.+.+. |.. .|+|+|++..+
T Consensus 51 ~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l 130 (291)
T 1mq8_A 51 VYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKEL 130 (291)
T ss_dssp EEEEESCCSCCCCEEEEECSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEE
T ss_pred EEEEEecccCCeEEEEEEcCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEe
Confidence 4888998887789999965 3444432 222222347889999999999765 433 58999999877
Q ss_pred CCCCeEE-cccceEEEccCCCCCCeEEEEEEEeCCc--------eEEEEEEEEEEeeccccccCCCceEEecCCcEEEEE
Q psy15127 113 PTGRAKI-LDDRSLQIENVGPQDEGLYICDVENLVG--------SISLRASLTVHLLRDDFRAEPKDTRVASGETALLEC 183 (633)
Q Consensus 113 ~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~g--------~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C 183 (633)
....... ....+|.+...+.+|.+.|+|+|.+..+ ..++...|.|..+++..........+.+|+.++|.|
T Consensus 131 ~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C 210 (291)
T 1mq8_A 131 KREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVC 210 (291)
T ss_dssp EEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------
T ss_pred ecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEE
Confidence 4321100 1124677777777777899999998754 245667888888743312111123678999999999
Q ss_pred eCCCCC-CC--CeEEEEECCEEecc
Q psy15127 184 GPPKGQ-PE--PTLHWKKNGQFIDL 205 (633)
Q Consensus 184 ~~~~~~-p~--~~i~W~~~~~~~~~ 205 (633)
. ..|. |. ..+.|+++|+.+..
T Consensus 211 ~-~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 211 S-LDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp -------------------------
T ss_pred E-cCCCCCCcccEEEEEECCEecCc
Confidence 9 5665 44 26999999998864
No 395
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.41 E-value=2.9e-12 Score=117.30 Aligned_cols=181 Identities=13% Similarity=0.054 Sum_probs=110.3
Q ss_pred CCCCcEEEEe-eCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCC------C---CeEEEEEe--eeeceEEEecCCCC
Q psy15127 412 PPAAPVILNT-TRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQ------T---GWVVAAHR--ITSTSITVSDLKPD 479 (633)
Q Consensus 412 ~p~~~~~~~~-~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~------~---~~~~~~~~--~~~~~~~i~~L~p~ 479 (633)
+|.++.+... ....+.-+|++.... ..+...|.+.|+..+.. . .......- ......+|..+...
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~g~~~---~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~ 79 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWSTSTIQ---SLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLL 79 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECCCC-----------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTT
T ss_pred CCEEEEEEECCCCcEEEEEecCCCcC---CcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhc
Confidence 5677888776 568999999998743 12222688888764310 0 01111111 12346888889999
Q ss_pred CeEEEEEEEEeccccCCCCCCCCceee-cCCCCCCCcchHHHHHHHhCCceEEeeeeeec-ccceEEEEEEEecCCCccc
Q psy15127 480 TSYMFIVRAENSHGLGIPSPVSPITRT-LGLNSLVPQHLLDEARARLGTKVVNLRELIPT-ASTAVRITWEVSWGSVPQH 557 (633)
Q Consensus 480 ~~Y~~~v~a~n~~G~g~~s~~~~~~~t-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~si~v~W~~p~~~~p~~ 557 (633)
+.|.|+|.|.|..|.+. +... .+.. ....|.+|.++ .+... ...++.|+|++|
T Consensus 80 ~~Y~~~V~a~N~~G~~~-s~~~-~~~~~~~vkp~pP~~l----------------~v~~~~~~~~l~l~W~~P------- 134 (206)
T 3v6o_A 80 SGYTMWIRINHSLGSLD-SPPT-CVLPDSVVKPLPPSSV----------------KAEITINIGLLKISWEKP------- 134 (206)
T ss_dssp SCEEEEEEEC---CCEE-CCCE-EECGGGGBCCCCCCSC----------------EEEEETTTTEEEEEC----------
T ss_pred ccEEEEEEEEcCCcccc-CCcc-cEeecceEcCCCCCce----------------EeEEecCCCeEEEEECCC-------
Confidence 99999999999999875 3332 2322 22345555544 55544 688999999965
Q ss_pred ccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 558 LLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 558 ~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
... ..+..| .|+|+..+... .|+.... .......+.|.+|+|++.|.|+|+|.+..|.|.+||
T Consensus 135 -~~~-~~~l~y-ev~y~~~~~~~------~w~~~~~----~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 135 -VFP-ENNLQF-QIRYGLSGKEV------QWKMYEV----YDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp -------CEEE-EEEEEESSSSC------CCEEEEE----CC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred -CCC-CCcEEE-EEEEEECCCCC------ceEEEec----ccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 111 246899 99999876322 3754321 122245799999999999999999999999999886
No 396
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=3.2e-13 Score=108.84 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=63.9
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhh-hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeecccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARA-RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRK 612 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~-i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~ 612 (633)
.+...+.+ +.|+|++| ...+|. |.+| .|+|+..+... |... ...+...+..++++|.+|+|
T Consensus 14 ~~~~~~~~-v~l~W~~P--------~~~~G~pi~~Y-~v~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~i~~L~p 75 (105)
T 2haz_A 14 QVEPYSST-AQVQFDEP--------EATGGVPILKY-KAEWRAVGEEV-------WHSK-WYDAKEASMEGIVTIVGLKP 75 (105)
T ss_dssp EEEECSSC-EEEEEECC--------SCCTTSCCCEE-EEEEEETTCCC-------CEEE-EEEHHHHHHHSEEEECSCCT
T ss_pred EEEEcCCc-EEEEEcCC--------cccCCccccEE-EEEEEECCCCC-------Cccc-eEEccccCCccEEEECCCCC
Confidence 67777777 99999965 456677 9999 99999887653 4211 01122223578999999999
Q ss_pred ceeEEEEEeccccccccccCC
Q psy15127 613 FTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 613 ~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
++.|.|+|+|.|.+|.|++|+
T Consensus 76 ~t~Y~~rV~A~n~~G~g~~S~ 96 (105)
T 2haz_A 76 ETTYAVRLAALNGKGLGEISA 96 (105)
T ss_dssp TCEEEEEEEEEETTEECCCCC
T ss_pred CCEEEEEEEEEcCCccCCCcC
Confidence 999999999999999999985
No 397
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.41 E-value=5.9e-13 Score=125.21 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=85.9
Q ss_pred eCceEEEcCCCC--CCeEEEEEEe--------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEE
Q psy15127 46 FGSVLGARGALS--DDQWKLIAKE--------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWR 106 (633)
Q Consensus 46 ~~~~L~i~~v~~--~G~Y~C~a~~--------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~ 106 (633)
.++.|.|.+++. +|.|+|.+.+ | ..+|.+...| ...+.+|++++|.|.+.+. .+.+.|+
T Consensus 58 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~ 135 (242)
T 1p6f_A 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLL 135 (242)
T ss_dssp CEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEE
T ss_pred ceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEE
Confidence 346799999998 9999999976 1 1256666555 4568999999999998754 5689999
Q ss_pred eCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCC---ceEEEEEEEEEEeec
Q psy15127 107 RDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLV---GSISLRASLTVHLLR 161 (633)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~---g~~s~~~~l~V~~~~ 161 (633)
|+|..+............|.|.+++.+|+|.|+|.+.|.. ...+..+.|.|.++.
T Consensus 136 k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 136 KEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp ECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred ECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 9998765321122235689999999999999999999864 225677888888753
No 398
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.41 E-value=9.6e-13 Score=107.68 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=66.0
Q ss_pred cCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEE---c--------ccceEEEccCCCCCCeEEEEEEEeCCceEEEEE
Q psy15127 85 SGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKI---L--------DDRSLQIENVGPQDEGLYICDVENLVGSISLRA 153 (633)
Q Consensus 85 ~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~---~--------~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~ 153 (633)
.+..+.|.|.+.|+|.|.|+|+|||.+|..+.+.. . ..+.|.|.+++..|+|.|+|.|.|..|..+..+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 67789999999999999999999999997653321 1 135799999999999999999999999999999
Q ss_pred EEEEEee
Q psy15127 154 SLTVHLL 160 (633)
Q Consensus 154 ~l~V~~~ 160 (633)
.|.|...
T Consensus 94 ~l~v~~~ 100 (126)
T 1he7_A 94 MAAFMDN 100 (126)
T ss_dssp EECCCSC
T ss_pred EEEEEcC
Confidence 9988876
No 399
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=4.7e-13 Score=111.55 Aligned_cols=102 Identities=29% Similarity=0.350 Sum_probs=82.3
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEe--cCCCCeEEEEEe---eeeceEEEecCCCCCeEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSS--DLQTGWVVAAHR---ITSTSITVSDLKPDTSYM 483 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~--~~~~~~~~~~~~---~~~~~~~i~~L~p~~~Y~ 483 (633)
.|++|..+.+..+..+++.|+|.++.+ ++.+|.+|.|+|+.. .....|...... .....++|.+|.|++.|.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~p~~~---~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~ 93 (124)
T 1wis_A 17 LPGPPTNLGISNIGPRSVTLQFRPGYD---GKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYS 93 (124)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCCC---CSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEEC
T ss_pred CCccCCCCEEEEecCCEEEEEEECCCC---CCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEE
Confidence 466777777888889999999988873 368899999999973 234567654322 456789999999999999
Q ss_pred EEEEEEeccccCCCCCCCCceeecCCCCCC
Q psy15127 484 FIVRAENSHGLGIPSPVSPITRTLGLNSLV 513 (633)
Q Consensus 484 ~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~ 513 (633)
|||+|.|..|.|+++.....++|.+.+|..
T Consensus 94 frV~A~N~~G~s~~S~~~~~~~T~~~~P~~ 123 (124)
T 1wis_A 94 FRMRQVNIVGTSPPSQPSRKIQTLQSGPSS 123 (124)
T ss_dssp CCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred EEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence 999999999999999876668888887764
No 400
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.40 E-value=3.7e-13 Score=124.47 Aligned_cols=109 Identities=13% Similarity=0.159 Sum_probs=80.6
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe-------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEec-
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE-------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGG- 97 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~-------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~- 97 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+ +. .+|.+...+....+.+|+.++|.|.+.+
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~ 139 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee
Confidence 46655532 3899999998 9999999987 11 2555555444433457999999999987
Q ss_pred cCCC-eEEEEeCCccCCCC-CeEE----------cccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 98 DPLP-TILWRRDDGKMPTG-RAKI----------LDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 98 ~p~p-~i~W~~~~~~i~~~-~~~~----------~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.|.+ .++|+|+|..+..+ .... ...+.|.|.+++.+|+|.|+|.|.|....
T Consensus 140 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 140 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp BSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 5665 89999999987655 1111 11238999999999999999999998655
No 401
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=4.5e-13 Score=113.20 Aligned_cols=81 Identities=26% Similarity=0.556 Sum_probs=68.0
Q ss_pred CCceEEEcCCeEEEEEEEeccCCCeEEEEeCC----------------------------ccC--CCCCeEEccc---ce
Q psy15127 78 PSDATVLSGSVVEFVCRVGGDPLPTILWRRDD----------------------------GKM--PTGRAKILDD---RS 124 (633)
Q Consensus 78 ~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~----------------------------~~i--~~~~~~~~~~---~~ 124 (633)
|.++.+.+|++++|.|.+.|.|.|.|+|+|++ ..+ ...+..+... ..
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 67789999999999999999999999999998 444 2233333322 46
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy15127 125 LQIENVGPQDEGLYICDVENLVGSISLRASLTVH 158 (633)
Q Consensus 125 L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~ 158 (633)
|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999888888875
No 402
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=5e-13 Score=108.56 Aligned_cols=92 Identities=10% Similarity=0.079 Sum_probs=72.3
Q ss_pred ecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccccee
Q psy15127 506 TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVR 585 (633)
Q Consensus 506 t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~ 585 (633)
|.+.+|.+|.++ ++..++.++|.|+|++| ...+|.|++| .|+|+..+....
T Consensus 3 T~~~~P~~p~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~~---- 53 (109)
T 2e7h_A 3 SGSSGPPAVSDI----------------RVTRSSPSSLSLAWAVP--------RAPSGAVLDY-EVKYHEKGAEGP---- 53 (109)
T ss_dssp SSCCSSCCCCCC----------------EEEEEETTEEEEECCCC--------CCSSSCCCEE-EEEEEETTCCST----
T ss_pred CCCCCCCCCCcc----------------EEEecCCCEEEEEeCCC--------CCCCCcEeEE-EEEEEECCCCCC----
Confidence 566777777777 88899999999999965 3667899999 999998762210
Q ss_pred eeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 586 ITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 586 ~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
... ..+ ....++++|.+|+|++.|.|+|+|.|.+|.|++|+
T Consensus 54 ---~~~--~~~--~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 94 (109)
T 2e7h_A 54 ---SSV--RFL--KTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQ 94 (109)
T ss_dssp ---TTS--EEE--EESSSEEEEESCCTTSCEEEEEEEECSSCBCCCCS
T ss_pred ---cee--EEE--ccCCCEEEECCCCCCCeEEEEEEEEeCCccCCCCC
Confidence 111 111 23467999999999999999999999999999985
No 403
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.40 E-value=1.4e-12 Score=101.98 Aligned_cols=85 Identities=21% Similarity=0.384 Sum_probs=72.6
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceE
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSI 149 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~ 149 (633)
.++.+...|....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... .+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 76 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-----KKLYMVPYVDLEHQGTYWCHVYNDRDSQ 76 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC-----SSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC-----CCeEEECCCCHHhCEEEEEEEEcCCCCE
Confidence 35788889999999999999999999999999999999998876542 3589999999999999999999999874
Q ss_pred -EEEEEEEEEe
Q psy15127 150 -SLRASLTVHL 159 (633)
Q Consensus 150 -s~~~~l~V~~ 159 (633)
+..+.|.|..
T Consensus 77 ~s~~~~l~V~~ 87 (91)
T 3bfo_A 77 DSKKVEIIIDE 87 (91)
T ss_dssp ECCCEEEEEC-
T ss_pred EeeeEEEEEeh
Confidence 3556777754
No 404
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.2e-12 Score=110.89 Aligned_cols=107 Identities=17% Similarity=0.175 Sum_probs=82.6
Q ss_pred ccCCCCCCCCceeecCCCCCCCc-chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQ-HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .++|.+..|..+| ++ ++..++.+++.|+|++| .....+|.|.+| .|
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p------~~~~~~g~i~~Y-~v 56 (134)
T 2edx_A 1 GSSGSSGTI-EARTAQSTPSAPPQKV----------------MCVSMGSTTVRVSWVPP------PADSRNGVITQY-SV 56 (134)
T ss_dssp CCCCCCCCC-CCSSCCSCCSSCSEEE----------------EEECSSSSEEEEEEECC------CSTTCSSCEEEE-EE
T ss_pred CCCCCcCCE-EEEeCCCCCCCCCccc----------------EEEeCCCCEEEEEecCC------CccCCCCceeEE-EE
Confidence 678888776 5778888777444 55 78888999999999943 223567899999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEee-cCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVM-NAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+..+... +.. ..+. .....++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 57 ~~~~~~~~~-------~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 109 (134)
T 2edx_A 57 AYEAVDGED-------RGR---HVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESS 109 (134)
T ss_dssp EEEESSSSC-------CCC---EEECCCBTTCSEEEEESCCTTCEEEEEEEEEETTBCCCCCC
T ss_pred EEEECCCCC-------ccc---EEEEeeCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCC
Confidence 999876543 110 1111 246689999999999999999999999999999885
No 405
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=3.3e-13 Score=109.58 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=73.4
Q ss_pred ecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccccee
Q psy15127 506 TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVR 585 (633)
Q Consensus 506 t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~ 585 (633)
|.+..|.+|.++ ++..++.++|.|+|++| ...+|.|.+| .|+|+..+...
T Consensus 3 T~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~----- 52 (108)
T 2djs_A 3 SGSSGPSTVPIM----------------HQVSATMRSITLSWPQP--------EQPNGIILDY-EIRYYEKEHNE----- 52 (108)
T ss_dssp SCCCCCCCCSCC----------------EEEEECSSEEEEECCCC--------SCCSSCEEEE-EEEEEETTSCS-----
T ss_pred cCCCCCCCCcce----------------EEEecCCCEEEEEECCC--------CCCCCeEEEE-EEEEEECCCCC-----
Confidence 556677777776 78889999999999965 4577889999 99999876543
Q ss_pred eeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 586 ITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 586 ~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.. .. .....++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 53 --~~~---~~--~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~ 93 (108)
T 2djs_A 53 --FNS---SM--ARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSG 93 (108)
T ss_dssp --TTC---EE--EEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECC
T ss_pred --cce---eE--EecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCC
Confidence 211 11 224578999999999999999999999999999985
No 406
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.40 E-value=9.3e-13 Score=105.20 Aligned_cols=88 Identities=32% Similarity=0.525 Sum_probs=72.2
Q ss_pred cCCeeeeCC----CceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC-----eEEcccceEEEccCCCCCCeEEEE
Q psy15127 70 IKPFPISEP----SDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR-----AKILDDRSLQIENVGPQDEGLYIC 140 (633)
Q Consensus 70 ~~p~~~~~~----~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~-----~~~~~~~~L~i~~v~~~d~G~Y~C 140 (633)
.+|.|...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ........|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 82 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEE
Confidence 356776554 35678899999999999999999999999998875421 222334689999999999999999
Q ss_pred EEEeCCceEEEEEEEEE
Q psy15127 141 DVENLVGSISLRASLTV 157 (633)
Q Consensus 141 ~~~n~~g~~s~~~~l~V 157 (633)
.|.|..|..+..+.|.|
T Consensus 83 ~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 83 VVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEeCCCEEEEEEEEEE
Confidence 99999999888888876
No 407
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=3.3e-12 Score=117.19 Aligned_cols=158 Identities=15% Similarity=0.184 Sum_probs=98.7
Q ss_pred eeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC-----------CCCCeEEccc------ceEEEccCCCCC
Q psy15127 74 PISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM-----------PTGRAKILDD------RSLQIENVGPQD 134 (633)
Q Consensus 74 ~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i-----------~~~~~~~~~~------~~L~i~~v~~~d 134 (633)
+...|..+.+.+|++++|.|.+.+.. +.+.|+|+.. .+ ..+|+....+ ..|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45667888999999999999997653 4899998532 11 1244444332 479999999999
Q ss_pred CeEEEEEEEeCCc---------e--EEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEE
Q psy15127 135 EGLYICDVENLVG---------S--ISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQF 202 (633)
Q Consensus 135 ~G~Y~C~~~n~~g---------~--~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~ 202 (633)
+|.|.|.+.+..+ . ....+.|.|... ......|. ..+..+ .+.|.|.+....|. +.+.|+++ ..
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~-~~~~~~P~-v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~ 158 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPK-SQPPAKPS-VFIMKN-GTNVACLVKDFYPKEVTISLRSS-KK 158 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECC-CCCCCCCE-EEEEEE-TTEEEEEEEEESSSCCEEEEECS-SE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccC-CCCCCCCe-EEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Cc
Confidence 9999999987632 1 123457777753 11111222 222222 37999996555665 79999999 66
Q ss_pred eccCCCeeEEeccceeeeE-----EEeeeEEEEeecCCC
Q psy15127 203 IDLESSKSLDLSRRTLGWL-----RVRPLYWNVARPRAN 236 (633)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~-----~~~g~y~C~a~~~~~ 236 (633)
+............+.+.+. ...+.|+|.+.|...
T Consensus 159 l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 159 IVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred ccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 6432211111112222221 123689999988754
No 408
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=1.3e-12 Score=108.39 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=76.4
Q ss_pred ceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccc
Q psy15127 503 ITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAST 582 (633)
Q Consensus 503 ~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~ 582 (633)
.+.|.+.+|.+|.++ ++..++.++|.|+|++| . .+.++.|.+| .|+|+..+...
T Consensus 10 ~~~t~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p------~-~~~~g~i~~Y-~v~~~~~~~~~-- 63 (120)
T 1x5f_A 10 APATTGPLPSAPRDV----------------VASLVSTRFIKLTWRTP------A-SDPHGDNLTY-SVFYTKEGIAR-- 63 (120)
T ss_dssp CCCCCCCCCCCCEEE----------------EEEEECSSCEEEEEECC------S-SCSSCCSSEE-EEEEEETTCCC--
T ss_pred EecCCCCCCCCCCCc----------------EEEecCCCEEEEEECCC------C-CCCCCcEEEE-EEEEEECCCCC--
Confidence 366778888877776 78888999999999955 1 1567899999 99999875443
Q ss_pred ceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 583 AVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 583 ~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.. ........+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 64 -----~~~----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 105 (120)
T 1x5f_A 64 -----ERV----ENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSA 105 (120)
T ss_dssp -----CEE----EECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECC
T ss_pred -----ceE----EEeccCCccEEEeCCCCCCCEEEEEEEEECCCccCCCCC
Confidence 321 112345688999999999999999999999999999885
No 409
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.39 E-value=1.8e-12 Score=119.80 Aligned_cols=113 Identities=15% Similarity=0.136 Sum_probs=80.0
Q ss_pred CceEEee-----CceEEEcCCCC--CCeEEEEEEecC-------------------cCCeeeeCCCceEEEcCCeEEEEE
Q psy15127 40 RRSRSIF-----GSVLGARGALS--DDQWKLIAKEAL-------------------IKPFPISEPSDATVLSGSVVEFVC 93 (633)
Q Consensus 40 ~~~~~~~-----~~~L~i~~v~~--~G~Y~C~a~~v~-------------------~~p~~~~~~~~~~~~~G~~~~L~C 93 (633)
.|+.+.. +.+|.|.+++. +|.|+|.+.+.. .+|.+.. +. .+.+|+.++|.|
T Consensus 69 ~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C 145 (214)
T 2zg1_A 69 GRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSC 145 (214)
T ss_dssp TTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEE
T ss_pred CceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEE
Confidence 4666543 34799999999 999999998711 1233322 22 257899999999
Q ss_pred EEecc----CCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEEEE
Q psy15127 94 RVGGD----PLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS--ISLRASLTV 157 (633)
Q Consensus 94 ~~~~~----p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l~V 157 (633)
.+.+. |.|.++|+|++..+...+. ...+.|.|..+..+|+|.|+|.|.|..+. .++.+.|.|
T Consensus 146 ~~~~~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 146 SLPGSCEAGPPLTFSWTGNALSPLDPET--TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp ECTTCCSCSSCCEEEEESSTTSSSCSSC--CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred EeccCCCCCCCceEEEeCCCCccCCCCc--eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 99763 7889999999876543321 34578999999999999999999997654 345554443
No 410
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.39 E-value=2.7e-12 Score=120.54 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=109.4
Q ss_pred CceEEecccccCCEEEEEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCC
Q psy15127 357 LRRIACDLRETDSGLYTCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPR 436 (633)
Q Consensus 357 ~~~~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~ 436 (633)
..+.+.+|.....|.|++.|.|..|....+..+.+..... .|.+|..+.+...+.+++.|+|.+|...
T Consensus 58 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~------------~P~~P~~l~~~~~~~~sv~l~W~~p~~~ 125 (234)
T 3f7q_A 58 PSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE------------VPSEPGRLAFNVVSSTVTQLSWAEPAET 125 (234)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC------------CCCCCCCCEEEECSSSCEEEECCCCSCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCC------------CCCCCCccEEEEecCCEEEEEEcCCCCC
Confidence 3456779999999999999999988765444444443332 2566788888888999999999998743
Q ss_pred CCCCcceeEEEEEEEEecCCC----CeEEEEE-eeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecCCCC
Q psy15127 437 GGGVAPVIGYTVEYFSSDLQT----GWVVAAH-RITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLGLNS 511 (633)
Q Consensus 437 ~~~~~~i~~Y~v~~~~~~~~~----~~~~~~~-~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~~~p 511 (633)
++.+.+|.|+|+..+... .|..... ....+.++|.+|.|++.|.|+|+|.|..|.|++|.....++|.+.+|
T Consensus 126 ---~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P 202 (234)
T 3f7q_A 126 ---NGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRP 202 (234)
T ss_dssp ---SSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCC
T ss_pred ---CCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCC
Confidence 578999999999765432 1332211 12346899999999999999999999999999876433467777777
Q ss_pred CCCcch
Q psy15127 512 LVPQHL 517 (633)
Q Consensus 512 ~~~~~~ 517 (633)
..+|..
T Consensus 203 ~~~P~~ 208 (234)
T 3f7q_A 203 MSIPII 208 (234)
T ss_dssp CCCCCC
T ss_pred CCCccc
Confidence 777765
No 411
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.39 E-value=2e-12 Score=121.86 Aligned_cols=134 Identities=16% Similarity=0.124 Sum_probs=91.6
Q ss_pred CCCCCcccccccee----eEEEEecc---c---CCCCCceEEee----CceEEEcCCCC--CCeEEEEEEe---------
Q psy15127 13 MSSPRAEIEPATRT----NRVSISGD---P---GFDSRRSRSIF----GSVLGARGALS--DDQWKLIAKE--------- 67 (633)
Q Consensus 13 ~~~~~~~i~~~~~~----~~~~~~~~---~---~~~~~~~~~~~----~~~L~i~~v~~--~G~Y~C~a~~--------- 67 (633)
.+.|.+.|.|+... ..+.+... . .....|+.+.. +.+|.|.+++. +|.|+|.|.+
T Consensus 24 ~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~ 103 (238)
T 2p1y_A 24 QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLF 103 (238)
T ss_dssp ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEE
T ss_pred cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccce
Confidence 35567788877641 12221100 0 01134666543 35799999998 9999999985
Q ss_pred --------cCcCC------------eeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc--cC-------------
Q psy15127 68 --------ALIKP------------FPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG--KM------------- 112 (633)
Q Consensus 68 --------v~~~p------------~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~--~i------------- 112 (633)
+...+ .+...|....+.+|++++|.|.+.+.|.+.+.|+|++. ..
T Consensus 104 ~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~ 183 (238)
T 2p1y_A 104 FGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKK 183 (238)
T ss_dssp ECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEE
T ss_pred eCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcc
Confidence 11111 45556777789999999999999999899999999642 11
Q ss_pred CCCCeEEcc-----cceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 113 PTGRAKILD-----DRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 113 ~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
..+++.... ...|.|.+++.+|+|.|+|.|.|..
T Consensus 184 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 184 EDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred cCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 122333321 2589999999999999999999873
No 412
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=6.6e-13 Score=105.76 Aligned_cols=84 Identities=24% Similarity=0.416 Sum_probs=71.9
Q ss_pred eCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASL 155 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l 155 (633)
..|..+.+.+|+.++|.|.+.+.| |.++|+|++..+............|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 86 (99)
T 2cr3_A 8 VEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86 (99)
T ss_dssp CCEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEE
Confidence 345567789999999999999876 7999999999886654444457899999999999999999999999998888888
Q ss_pred EEEee
Q psy15127 156 TVHLL 160 (633)
Q Consensus 156 ~V~~~ 160 (633)
.|...
T Consensus 87 ~V~~~ 91 (99)
T 2cr3_A 87 NVSDA 91 (99)
T ss_dssp CBCSC
T ss_pred EEecC
Confidence 88765
No 413
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.39 E-value=2.3e-12 Score=107.18 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=70.5
Q ss_pred eCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCCccCC------CCCeEE------cccceEEEccCCCCCCeEEEEE
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDDGKMP------TGRAKI------LDDRSLQIENVGPQDEGLYICD 141 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~~~i~------~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~ 141 (633)
..+..+.+.+|+++.|.|.+.|. |.+.+.|++++..+. ...... ...+.|.|.+++.+|+|.|+|.
T Consensus 13 ~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (122)
T 3s35_X 13 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 92 (122)
T ss_dssp ESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEE
Confidence 34445689999999999999984 456899999988542 111111 1345899999999999999999
Q ss_pred EEeCCceEEEEEEEEEEeeccccccCCCc
Q psy15127 142 VENLVGSISLRASLTVHLLRDDFRAEPKD 170 (633)
Q Consensus 142 ~~n~~g~~s~~~~l~V~~~~p~~~~~~~~ 170 (633)
|.|..|..+..+.|.|..+ |.+.+.|..
T Consensus 93 a~n~~g~~~~~~~l~V~~~-p~i~~~p~~ 120 (122)
T 3s35_X 93 ASSGLMTKKNSTFVRVHEK-PFVAFGSGM 120 (122)
T ss_dssp EECSSCEEEEEEEEEEEEE-ECC------
T ss_pred EccCCCceEEEEEEEEecc-CeEEeecCC
Confidence 9999999999999999988 777666543
No 414
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.38 E-value=1.4e-12 Score=108.20 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=75.4
Q ss_pred eeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccc
Q psy15127 504 TRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTA 583 (633)
Q Consensus 504 ~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~ 583 (633)
..+...+|.+|..+ .+..++.+++.|.|++| .++++.|++| .|+|+......
T Consensus 11 ~~~~~~~P~~P~~~----------------~~~~~~~~sv~l~W~p~--------~~~~~~i~~Y-~v~~~~~~~~~--- 62 (121)
T 1x4z_A 11 DHGRLSPPEAPDRP----------------TISTASETSVYVTWIPR--------GNGGFPIQSF-RVEYKKLKKVG--- 62 (121)
T ss_dssp CSSSCCCCCCCCCC----------------EEEECCSSEEEEECCCC--------CCTTSCCCEE-EEEEEESSSCC---
T ss_pred ccCcCCCCccCCCC----------------EEEEccCCEEEEEEECC--------CCCCCcceEE-EEEEEECCCCC---
Confidence 44455677777766 78888999999999944 4567789999 99999876322
Q ss_pred eeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 584 VRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 584 ~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|..... ......+.++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 63 ---~w~~~~~---~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 106 (121)
T 1x4z_A 63 ---DWILATS---AIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSA 106 (121)
T ss_dssp ---CCEEEEE---EECTTCCEEEEESCCTTCEEEEEEEEEETTEECCCCC
T ss_pred ---ceEEeec---ccCCCcCEEEECCCCCCCEEEEEEEEEcCCCcCCCcC
Confidence 3754321 1245688999999999999999999999999999985
No 415
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.38 E-value=1.4e-12 Score=121.95 Aligned_cols=182 Identities=16% Similarity=0.145 Sum_probs=109.4
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcc-eeEEEEEEEEecCC---CCeEEEEEe----eeeceEEEecCCCCC
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAP-VIGYTVEYFSSDLQ---TGWVVAAHR----ITSTSITVSDLKPDT 480 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~-i~~Y~v~~~~~~~~---~~~~~~~~~----~~~~~~~i~~L~p~~ 480 (633)
+|+.|..+.+......++.+.|+++... +.+ ...|.|.|+..+.. ..+..-... .....+...+|.+++
T Consensus 29 pP~~P~~l~C~~~~~~~~~c~W~p~~~~---~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~ 105 (236)
T 1axi_B 29 SSGEPKFTKCRSPERETFSCHWTDEVHH---GTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAI 105 (236)
T ss_dssp ---CCCEEEEEBSSSSCEEEEECCC-----------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSS
T ss_pred CCCCCcCCeEEeCCCCEEEEEecCCCCC---CCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccc
Confidence 3566777777777889999999986532 222 24688888765432 123221111 122345667899999
Q ss_pred eEEEEEEEEeccccCCCCCCCCcee-ecCCCCCCCcchHHHHHHHhCCceEEeeeeeeccc----ceEEEEEEEecCCCc
Q psy15127 481 SYMFIVRAENSHGLGIPSPVSPITR-TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTAS----TAVRITWEVSWGSVP 555 (633)
Q Consensus 481 ~Y~~~v~a~n~~G~g~~s~~~~~~~-t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~si~v~W~~p~~~~p 555 (633)
.|.|+|.| | .+.+. .. .+. +....|.+|.++ .+ ++..++. ..+.|+|++| +
T Consensus 106 ~Y~~~V~a-N-~~~s~---~~-~~~~~~~v~p~pP~~l-------------~~-~~~~~s~~~~~~~l~lsW~~P----~ 161 (236)
T 1axi_B 106 PYCIKLTS-N-GGTVD---EK-CFSVDEIVQPDPPIAL-------------NW-TLLNVSLTGIHADIQVRWEAP----R 161 (236)
T ss_dssp EEEEEEEE-T-TEEEE---EE-EEEGGGGBCCCCCEEE-------------EE-EECSCCSSCSEEEEEEEEECC----T
T ss_pred eEEEEEEE-C-CccCC---Ce-EeecccccccCCCccc-------------EE-EEEecccCCCCceEEEEECCC----C
Confidence 99999999 8 33332 22 122 222234444433 00 1223322 4599999954 1
Q ss_pred ccccchhh-hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccccc--ccccC
Q psy15127 556 QHLLDEAR-ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTV--EGARL 632 (633)
Q Consensus 556 ~~~~~~~~-~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g--~g~~s 632 (633)
.....+| .+..| .|+|+..+... |+... ....++++|.+|+|++.|.|+|+|.+..| -|++|
T Consensus 162 -~~~~~~g~~~l~Y-evry~~~~~~~-------w~~~~------~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS 226 (236)
T 1axi_B 162 -NADIQKGWMVLEY-ELQYKEVNETK-------WKMMD------PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFS 226 (236)
T ss_dssp -TSCTTTTSCCEEE-EEEEEETTCSS-------CEECC------CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCC
T ss_pred -CccccCCceeeEE-EEEEEECCCCc-------eEEEe------ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCC
Confidence 1112345 68999 99999886543 65332 22468999999999999999999999888 66655
No 416
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.38 E-value=1.6e-12 Score=108.22 Aligned_cols=101 Identities=20% Similarity=0.324 Sum_probs=76.7
Q ss_pred ceeecCCCCCC-CcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcc
Q psy15127 503 ITRTLGLNSLV-PQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAS 581 (633)
Q Consensus 503 ~~~t~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~ 581 (633)
.++|.+..|.. |.++ ++..++.+++.|+|++| .....+|.|++| .|+|+..+...
T Consensus 7 ~~~T~~~~P~~~P~~~----------------~~~~~~~~sv~l~W~~p------~~~~~~g~i~~Y-~v~~~~~~~~~- 62 (122)
T 1va9_A 7 GISTEEAAPDGPPMDV----------------TLQPVTSQSIQVTWKAP------KKELQNGVIRGY-QIGYRENSPGS- 62 (122)
T ss_dssp SSCSSCCCCSSCCEEE----------------EEEECSSSEEEEEEECC------CSSTTCSCCCEE-EEEEEESSTTS-
T ss_pred EEECCCCCCCCCCcce----------------EEEeccCCEEEEEEeCC------CCcCCCCcEeEE-EEEEEECCCCC-
Confidence 46677777764 4445 78888999999999954 222368899999 99999887543
Q ss_pred cceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 582 TAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 582 ~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.......+...+..++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 63 ------~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 108 (122)
T 1va9_A 63 ------NGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSS 108 (122)
T ss_dssp ------CCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEEEETTEECCCCC
T ss_pred ------CcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCcc
Confidence 2222222223345679999999999999999999999999999985
No 417
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.38 E-value=6.6e-12 Score=101.23 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=80.6
Q ss_pred CCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 408 LFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
..|++|..+++...+.+++.|+|++|.. ++.+|.+|.|+|+..+ ..|... .....+.++|.+|.|++.|.|+|+
T Consensus 6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~~---~g~~i~~Y~v~~~~~~--~~~~~~-~~~~~~~~~v~~L~p~t~Y~frV~ 79 (106)
T 1x4x_A 6 SGPDQCKPPQVTCRSATCAQVNWEVPLS---NGTDVTEYRLEWGGVE--GSMQIC-YCGPGLSYEIKGLSPATTYYCRVQ 79 (106)
T ss_dssp CSCCCCCCCCCEEEETTEEEEECCCCSC---SSSCCCEEEEEEESST--TSCCEE-EEESCSEEEEESCCSSCEEEEEEE
T ss_pred CCcCCCCCCEEEEcCCCEEEEEEcCCCC---CCCcceEEEEEEEcCC--CceEEE-EeCCcceEEEcCCCCCCEEEEEEE
Confidence 3577888888888999999999999984 3468999999998754 233222 233567899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCCC
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLVP 514 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~~ 514 (633)
|.|..|.|++|... .++|.+.+|.++
T Consensus 80 A~n~~G~g~~S~~v-~~~T~~~~P~~~ 105 (106)
T 1x4x_A 80 ALSVVGAGPFSEVV-ACVTPPSSGPSS 105 (106)
T ss_dssp EECSSCCCCBCCCE-EEECCCCCSCCC
T ss_pred EEcCCcCCCCcCCE-EEECCCCCcCCC
Confidence 99999999998776 578887777654
No 418
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.5e-12 Score=106.85 Aligned_cols=90 Identities=19% Similarity=0.258 Sum_probs=69.6
Q ss_pred eeecC-CCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccc
Q psy15127 504 TRTLG-LNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAST 582 (633)
Q Consensus 504 ~~t~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~ 582 (633)
..+.+ ..|.+|.++ ++..++ ++|.|+|++| ...+|.|++| .|+|+.... .
T Consensus 10 ~~t~e~~~P~~P~~l----------------~~~~~~-~sv~l~W~~P--------~~~ng~i~gY-~i~y~~~~~-~-- 60 (116)
T 2edb_A 10 NDLDESQVPDQPSSL----------------HVRPQT-NCIIMSWTPP--------LNPNIVVRGY-IIGYGVGSP-Y-- 60 (116)
T ss_dssp SSCBCSSCCCCCSCE----------------EEEECS-SCEEEEECCC--------SCTTBCCCEE-EEEEEESST-T--
T ss_pred ccCCCCCCCCCCCCe----------------EEEECC-CEEEEEEcCC--------CCCCCceeEE-EEEEEeCCC-C--
Confidence 34444 677766666 788888 9999999965 4558899999 999985321 1
Q ss_pred ceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccC
Q psy15127 583 AVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARL 632 (633)
Q Consensus 583 ~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s 632 (633)
. .........++++|.+|++++.|.|+|+|.|.+|.|+++
T Consensus 61 ------~----~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~ 100 (116)
T 2edb_A 61 ------A----ETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPL 100 (116)
T ss_dssp ------S----EEEEEETTCCEEEECSCCSSSBEEEEEEEEETTEECSCE
T ss_pred ------e----EEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCccCCCC
Confidence 1 122234668999999999999999999999999999975
No 419
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.37 E-value=1.4e-11 Score=102.21 Aligned_cols=101 Identities=28% Similarity=0.378 Sum_probs=82.4
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEe--eeeceEEEecCCCCCeEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHR--ITSTSITVSDLKPDTSYMFIV 486 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~~~Y~~~v 486 (633)
.|.+|..+.+...+.+++.|+|.++. +++.++.+|.|+|+..+....|...... ...+.++|.+|.|++.|.|+|
T Consensus 17 ~P~~P~~~~~~~~~~~sv~l~W~p~~---~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV 93 (121)
T 1x4z_A 17 PPEAPDRPTISTASETSVYVTWIPRG---NGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRV 93 (121)
T ss_dssp CCCCCCCCEEEECCSSEEEEECCCCC---CTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEE
T ss_pred CCccCCCCEEEEccCCEEEEEEECCC---CCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEE
Confidence 57788899999999999999999765 3367899999999987645677655433 346889999999999999999
Q ss_pred EEEeccccCCCCCCCCceeecCCCCC
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGLNSL 512 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~~p~ 512 (633)
+|.|..|.|++|.....+++...+|.
T Consensus 94 ~A~n~~G~s~~S~~~~~v~~~~~~P~ 119 (121)
T 1x4z_A 94 RALNMLGESEPSAPSRPYVVSGSGPS 119 (121)
T ss_dssp EEEETTEECCCCCCCCCEECCSSCCC
T ss_pred EEEcCCCcCCCcCCCCCEEcCCCCCC
Confidence 99999999999988766767665543
No 420
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.37 E-value=1e-12 Score=121.41 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=79.3
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe---------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE---------------A---LIKPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~---------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+ + ..+|.+...+....+.+|+.++|.|.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~ 139 (213)
T 3nl4_L 60 SRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVAN 139 (213)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEE
T ss_pred ccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEe
Confidence 46655433 3799999999 9999999976 1 3445555544444556799999999998
Q ss_pred c-cCCCeEEEEeCCccCCCCC-----------eEEcccceEEEccCCCCCCeEEEEEEE
Q psy15127 97 G-DPLPTILWRRDDGKMPTGR-----------AKILDDRSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 97 ~-~p~p~i~W~~~~~~i~~~~-----------~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
+ .|.+.|+|+|+|..+..+. ......+.|.|.+++.+|+|.|+|.|.
T Consensus 140 g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 140 KYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 8 8989999999999875432 111122579999999999999999998
No 421
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.37 E-value=1.4e-12 Score=120.23 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=79.1
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe-------------cC---cCCeeeeCCCceEEEcCCeEEEEEEEec-
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE-------------AL---IKPFPISEPSDATVLSGSVVEFVCRVGG- 97 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~-------------v~---~~p~~~~~~~~~~~~~G~~~~L~C~~~~- 97 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+ +. .+|.+...+....+.+|+.++|.|.+.|
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 138 (210)
T 1lk3_L 59 ARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNF 138 (210)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred ccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeE
Confidence 46655432 3799999998 9999999987 11 2455554443333447999999999987
Q ss_pred cCCC-eEEEEeCCccCCCC-CeE----Eccc------ceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 98 DPLP-TILWRRDDGKMPTG-RAK----ILDD------RSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 98 ~p~p-~i~W~~~~~~i~~~-~~~----~~~~------~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.|.+ .|.|+|+|..+..+ ... ...+ +.|.|.++..+|+|.|+|.|.|....
T Consensus 139 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 139 YPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp BSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred eCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 4554 89999999988655 111 1111 36999999999999999999987653
No 422
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=9.2e-13 Score=106.73 Aligned_cols=79 Identities=19% Similarity=0.172 Sum_probs=65.0
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
.+...+.+++.|+|++| ...++.|++| .|+|+..+... |.. +......++++|.+|+|+
T Consensus 14 ~v~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~-------~~~-----~~~~~~~~~~~i~~L~p~ 72 (107)
T 2dn7_A 14 MISTTAMNTALLQWHPP--------KELPGELLGY-RLQYCRADEAR-------PNT-----IDFGKDDQHFTVTGLHKG 72 (107)
T ss_dssp EEEECSTTEEEEEEECC--------SSCSSCCCEE-EEEEEETTCSS-------CEE-----EEEETTCCEEEEECCCTT
T ss_pred eEEecCCCEEEEEECCC--------CCCCCceeEE-EEEEEECCCCC-------CEE-----EEeCCCccEEEeCCCCCC
Confidence 56667999999999965 4567899999 99999776543 442 234466789999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|.|..|.|++|+
T Consensus 73 t~Y~~~V~A~n~~G~g~~s~ 92 (107)
T 2dn7_A 73 TTYIFRLAAKNRAGLGEEFE 92 (107)
T ss_dssp CEEEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEEEcCCcccCCee
Confidence 99999999999999999873
No 423
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.37 E-value=6.4e-13 Score=101.47 Aligned_cols=79 Identities=19% Similarity=0.370 Sum_probs=62.4
Q ss_pred CCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC-eEEccc---ceEEEccCCCCCCeEEEEEEEeCCceEEEE
Q psy15127 77 EPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR-AKILDD---RSLQIENVGPQDEGLYICDVENLVGSISLR 152 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~-~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~ 152 (633)
+..++.+.+|+.+.|.|.+.+ |.|.|+|+|||..|..+. ..+..+ ..|.|.+++.+|+|.|+|.|.| .+..
T Consensus 2 ~lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~ 76 (84)
T 2lu7_A 2 HMTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRI 76 (84)
T ss_dssp -CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEE
T ss_pred CCeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEE
Confidence 346788999999999999865 888999999999997653 333332 4799999999999999999844 4566
Q ss_pred EEEEEEee
Q psy15127 153 ASLTVHLL 160 (633)
Q Consensus 153 ~~l~V~~~ 160 (633)
+.|.|.+|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 77777653
No 424
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=4.2e-13 Score=111.57 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=80.3
Q ss_pred ccCCCCCCCCceeecCCCCC-CCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSL-VPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .++|.+..|. +|.++ ++..++.++|.|+|++| ...++.|.+| .|
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v 54 (121)
T 2dlh_A 1 GSSGSSGPV-LTQTSEQAPSSAPRDV----------------QARMLSSTTILVQWKEP--------EEPNGQIQGY-RV 54 (121)
T ss_dssp CCCCCCSSS-CSCCCCCCCCSCCEEE----------------EECCCSSSBCCEEEECC--------SCCCSCEEEE-EE
T ss_pred CCCCCCCCE-EEECCCcCCCCCCccc----------------EEEecCCCEEEEEECCC--------CCCCCcEeEE-EE
Confidence 678888777 4677777665 55545 78888999999999955 4567899999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+....... ..|.. ......++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 55 ~~~~~~~~~~----~~~~~------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 106 (121)
T 2dlh_A 55 YYTMDPTQHV----NNWMK------HNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSS 106 (121)
T ss_dssp ECCSCTTSCT----TTSCC------CCCSSCSEECCBSCCSSCEEEEEEEEEESSCBCCCCC
T ss_pred EEEeCCCCCc----cccEE------EecCCceEEEecCCCCCCEEEEEEEEEeCCccCCCCC
Confidence 9987654320 11221 1224578899999999999999999999999999985
No 425
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.37 E-value=1.3e-12 Score=103.20 Aligned_cols=84 Identities=26% Similarity=0.415 Sum_probs=71.9
Q ss_pred eeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRAS 154 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~ 154 (633)
+..|....+.+|+.+.|.|.+.+ .|.+.|+|+|..+.........++.|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 5 ~~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (95)
T 4hwu_A 5 GSQPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFM 82 (95)
T ss_dssp ---CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred ccCCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEE
Confidence 45677788999999999999886 5799999999988766555556789999999999999999999999999888999
Q ss_pred EEEEee
Q psy15127 155 LTVHLL 160 (633)
Q Consensus 155 l~V~~~ 160 (633)
|.|..+
T Consensus 83 l~V~~~ 88 (95)
T 4hwu_A 83 VNVTDA 88 (95)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 998876
No 426
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=5.7e-12 Score=103.89 Aligned_cols=103 Identities=39% Similarity=0.697 Sum_probs=85.5
Q ss_pred CCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 408 LFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
..|.+|..+.+.....+++.|+|.++.. ++.++.+|.|+|+..+....|.........+.++|.+|.|++.|.|+|+
T Consensus 14 ~~P~~P~~~~~~~~~~~sv~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~ 90 (117)
T 1uem_A 14 DLPGPPSKPQVTDVTKNSVTLSWQPGTP---GTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR 90 (117)
T ss_dssp CSCBCCCCCEEEEECSSCEEEECCCCBC---SSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEE
T ss_pred CCccCCCCCEEEEecCCEEEEEEeCCCC---CCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEE
Confidence 4577888999888999999999999882 3678999999999865445676654555678899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCC
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLV 513 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~ 513 (633)
|.|..|.|.+|.....++|...+|.+
T Consensus 91 A~n~~G~s~~S~~~~~v~t~~~~P~~ 116 (117)
T 1uem_A 91 AINPQGLSDPSPMSDPVRTQDSGPSS 116 (117)
T ss_dssp EEETTEEEEECCCCCCEECCCSSCCC
T ss_pred EECCCccCCCcCCCccEEccCCCCCC
Confidence 99999999998887657887776654
No 427
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=6.9e-12 Score=101.81 Aligned_cols=102 Identities=26% Similarity=0.276 Sum_probs=82.0
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|.+|..+++...+.+++.|+|.++...+ +.++.+|.|+|+..+....|... .......++|.+|.|++.|.|+|+|
T Consensus 7 ~P~~P~~p~~~~~~~~sv~l~W~~p~~~~--~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~v~~L~p~t~Y~frV~A 83 (109)
T 1x5x_A 7 GPSMPASPVLTKAGITWLSLQWSKPSGTP--SDEGISYILEMEEETSGYGFKPK-YDGEDLAYTVKNLRRSTKYKFKVIA 83 (109)
T ss_dssp CCCCCCCCEEEEECSSEEEEECCCCSSCC--SSSSCEEEEEECCSSSSCCCEEE-EEESCSEEEEESCCSSCEEEEEEEE
T ss_pred CCcCCCCCEEEEccCCEEEEEEcCCCCCC--CCcccEEEEEEecCCCCcceEEe-EeCCccEEEECCCCCCCEEEEEEEE
Confidence 46778888888899999999999998653 34899999999987654456543 2334678999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCC
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVP 514 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~ 514 (633)
.|..|.|.+|... .+.|...+|..|
T Consensus 84 ~n~~G~s~~S~~~-~~~T~~~~P~~p 108 (109)
T 1x5x_A 84 YNSEGKSNPSEVV-EFTTCPDSGPSS 108 (109)
T ss_dssp ECSSCEEEECCCE-EEECCCCCCCCC
T ss_pred EeCCCCcCCccCE-EeEeCCCCCCCC
Confidence 9999999988776 467777766654
No 428
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=1.1e-12 Score=108.12 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=77.2
Q ss_pred CCCCCCCCceeec--CCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEE
Q psy15127 495 GIPSPVSPITRTL--GLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVN 572 (633)
Q Consensus 495 g~~s~~~~~~~t~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~ 572 (633)
|++|... .++|. ..+|.+|.++ ++..++.++|.|+|++| ...++.+.+| .|+
T Consensus 1 G~~S~~~-~~~T~~~~~~P~~P~~l----------------~~~~~~~~si~l~W~~p--------~~~~~~i~~Y-~v~ 54 (116)
T 1x5g_A 1 GSSGSSG-RVETQPEVQLPGPAPNL----------------RAYAASPTSITVTWETP--------VSGNGEIQNY-KLY 54 (116)
T ss_dssp CCCCCCC-CCSSCCCSSCCCCCSSC----------------EEEEEETTEEEEECCCC--------SCCSSCCSEE-EEE
T ss_pred CCCccCe-EEEcCCCCCCCcCCCcc----------------EEEecCCCEEEEEEeCC--------CCCCCcccEE-EEE
Confidence 4556555 35663 3577777766 78888999999999965 3467899999 999
Q ss_pred EEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 573 LRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+..+... |.. + ....++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 55 ~~~~~~~~-------~~~-----~--~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 101 (116)
T 1x5g_A 55 YMEKGTDK-------EQD-----V--DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTP 101 (116)
T ss_dssp EEETTCCC-------CCC-----E--EECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCC
T ss_pred EEECCCCc-------cEE-----E--ecCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCC
Confidence 99876543 321 1 12478999999999999999999999999999985
No 429
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.36 E-value=1.5e-12 Score=106.24 Aligned_cols=84 Identities=14% Similarity=0.248 Sum_probs=61.2
Q ss_pred eeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEe-------ecCCccceEEe
Q psy15127 535 LIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATV-------MNAATTTSYTV 607 (633)
Q Consensus 535 ~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~-------~~~~~~~~~~i 607 (633)
+..++.++++|+|.+| .+.++.|++| .|+|++.+... .|...+.... ...+..++++|
T Consensus 11 v~~~~~~sv~L~W~~P--------~~~G~pI~~Y-~Ve~r~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~~~~v 75 (115)
T 2ic2_A 11 VTRLSDESVMLRWMVP--------RNDGLPIVIF-KVQYRMVGKRK------NWQTTNDNIPYGKPKWNSELGKSFTASV 75 (115)
T ss_dssp EEECC---EEEEEEEE--------CCSSCCEEEE-EEEEEECC---------CCEEEEEEEECCSCSCSSSSEEEEEEEE
T ss_pred eEEEeCCEEEEEEcCC--------CCCCCCCceE-EEEEEECCCCC------CceECcccccccccccccccCceeEEEe
Confidence 5567899999999976 4556889999 99999873222 4875543221 11234578999
Q ss_pred eccccceeEEEEEeccccccccccCC
Q psy15127 608 THLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 608 ~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.+|+|++.|.|||+|.|..|.|.||+
T Consensus 76 ~~L~p~t~Y~FRV~A~N~~G~~~pS~ 101 (115)
T 2ic2_A 76 TDLKPQHTYRFRILAVYSNNDNKESN 101 (115)
T ss_dssp CSCCSSEEEEEEEEEEETTSCEEECC
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCCC
Confidence 99999999999999999999988874
No 430
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=1e-12 Score=108.12 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=79.3
Q ss_pred ccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVN 572 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~ 572 (633)
|.|+.|... .++|.+..|.+|.++ ++..++.++|.|+|++| .+ +.+.+| .|+
T Consensus 1 G~g~~S~~~-~~~t~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~--~~i~~Y-~v~ 52 (115)
T 1x5z_A 1 GSSGSSGDI-QVITQTGVPGQPLNF----------------KAEPESETSILLSWTPP--------RS--DTIANY-ELV 52 (115)
T ss_dssp CCCCCCCCC-CCCCCSCCCCCCEEE----------------EEECSSSSEEEEEEECC--------SC--CCCCEE-EEC
T ss_pred CCCCCCCCE-EEECCCCCCCCCccC----------------EeeeCCCCEEEEEEcCC--------CC--CCccEE-EEE
Confidence 677777766 477878888877666 78888999999999954 22 389999 999
Q ss_pred EEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 573 LRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 573 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+..+... |.. + .....+.++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 53 ~~~~~~~~-------~~~-----~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 100 (115)
T 1x5z_A 53 YKDGEHGE-------EQR-----I-TIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTA 100 (115)
T ss_dssp BEESSSCC-------CBC-----C-EECSSSEEEEECCCTTCEEEECEEEECSSCEEEECC
T ss_pred EEeCCCCC-------ceE-----E-ecCCCcEEEECCCCCCCeEEEEEEEECCCcccCCCc
Confidence 99876543 321 1 123468999999999999999999999999999985
No 431
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=8e-13 Score=110.14 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=73.6
Q ss_pred ecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccccee
Q psy15127 506 TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVR 585 (633)
Q Consensus 506 t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~ 585 (633)
+...+|.+|.++ ++..++.++|.|+|.+| .++++.|++| .|+|+...... .
T Consensus 13 ~~~~~P~~P~~l----------------~~~~~~~~sv~l~W~p~--------~~~~~~i~~Y-~v~~~~~~~~~----~ 63 (124)
T 1wis_A 13 VPPELPGPPTNL----------------GISNIGPRSVTLQFRPG--------YDGKTSISRW-LVEAQVGVVGE----G 63 (124)
T ss_dssp CCCCCCCCCEEE----------------EEESCCSSCEEEEEECC--------CCCSSCCSEE-EEEECBSCCST----T
T ss_pred CCCCCCccCCCC----------------EEEEecCCEEEEEEECC--------CCCCCcccEE-EEEEEECCCCC----C
Confidence 345667777666 78888999999999854 4667889999 99998742111 1
Q ss_pred eeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 586 ITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 586 ~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
..|...... ......+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 64 ~~w~~~~~~--~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~ 109 (124)
T 1wis_A 64 EEWLLIHQL--SNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQ 109 (124)
T ss_dssp SCCEEEEEE--ESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCC
T ss_pred CCCeEeeeE--ccCCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcC
Confidence 247543221 1245688999999999999999999999999999985
No 432
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.36 E-value=4e-11 Score=109.18 Aligned_cols=176 Identities=16% Similarity=0.110 Sum_probs=123.6
Q ss_pred CCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEE----ecCCCCeEE--EEEeeeeceEEEec-CCCCCeEE
Q psy15127 411 GPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFS----SDLQTGWVV--AAHRITSTSITVSD-LKPDTSYM 483 (633)
Q Consensus 411 ~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~----~~~~~~~~~--~~~~~~~~~~~i~~-L~p~~~Y~ 483 (633)
.+|.++.+...+-. ..|.|+++... .....|.|+|+. ......|.. .+..+..+.+.|++ |..+..|.
T Consensus 8 p~P~nv~~~s~n~~-~iL~W~p~~~~----~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~ 82 (206)
T 4doh_B 8 PAPQQLSVLSTNMK-HLLMWSPVIAP----GETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYN 82 (206)
T ss_dssp CCCCCCEEEEETTE-EEEECCCCCCS----SSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEE
T ss_pred CCCCeeEEEEeCCE-EEEEECCCCCC----CCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEE
Confidence 45888888877655 79999999632 244789999995 123467875 45566778888884 77889999
Q ss_pred EEEEEEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhh
Q psy15127 484 FIVRAENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEAR 563 (633)
Q Consensus 484 ~~v~a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~ 563 (633)
+||+|.++.+.+.++.... +......-..||.+ .+. ....+|.|.|.+| +
T Consensus 83 ~RVrA~~~~~~S~w~~~~~-f~~~~~t~i~PP~v----------------~v~-~~~~~i~V~~~~p------------~ 132 (206)
T 4doh_B 83 LRVRATLGSQTSAWSILKH-PFNRQSTILTRPGM----------------EIT-KDGFHLVIELEDL------------G 132 (206)
T ss_dssp EEEEEEETTEECCCEECSS-CBCGGGCBCCCCCE----------------EEE-EETTEEEEEECCC------------C
T ss_pred EEEEEEcCCCccCcccccc-ccchhhcccCCCeE----------------EEE-eCCCEEEEEecCC------------C
Confidence 9999999999998865442 22222222223333 444 3688999999932 6
Q ss_pred hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccc--cccccCC
Q psy15127 564 ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKT--VEGARLD 633 (633)
Q Consensus 564 ~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~--g~g~~s~ 633 (633)
.+..| .|.|.+.+.... . ...+ .......++|.+|+|++.|.|+|+|.... |.|.+|.
T Consensus 133 ~~l~Y-~v~y~~~~~~~~---------~-~~~~-~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~ 192 (206)
T 4doh_B 133 PQFEF-LVAYWRREPGAE---------E-HVKM-VRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQ 192 (206)
T ss_dssp TTCEE-EEEEEESSSSCC---------C-EEEE-ECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCC
T ss_pred CcEEE-EEEEEEcCCCce---------e-EEeE-EccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCC
Confidence 78899 899988766541 0 0111 12335789999999999999999999864 7888774
No 433
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=4.9e-12 Score=104.42 Aligned_cols=101 Identities=21% Similarity=0.275 Sum_probs=83.3
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|.+|..+.+.....+++.|+|.++.. ++.++.+|.|+|+..+....|... .......++|.+|.|++.|.|+|+|
T Consensus 17 ~P~~P~~~~~~~~~~~sv~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~v~~L~p~t~Y~frV~A 92 (118)
T 1x3d_A 17 EPDIPNPPRIANRTKNSLTLQWKAPSD---NGSKIQNFVLEWDEGKGNGEFCQC-YMGSQKQFKITKLSPAMGCKFRLSA 92 (118)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCCC---CSSCEEEEEEEECTTTSSSCCEEE-EEESCSEEEEESCCTTCEEEEECCE
T ss_pred CCcCCCCcEEeccCCCEEEEEECCCCC---CCCcceEEEEEEecCCCCCCeEEe-eccCCcEEEeCCCCCCCEEEEEEEE
Confidence 467888899999999999999999983 357899999999876544567644 3335688999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCC
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVP 514 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~ 514 (633)
.|..|.|.+|... .+.|.+.+|..|
T Consensus 93 ~n~~G~s~~S~~~-~~~T~~~~P~~P 117 (118)
T 1x3d_A 93 RNDYGTSGFSEEV-LYYTSGCSGPSS 117 (118)
T ss_dssp EESSCBCCCCCCE-EEECSCCCCCCC
T ss_pred EECCCCCCCccCE-EEEcCCCCCccC
Confidence 9999999999877 467877777655
No 434
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.36 E-value=4.5e-12 Score=100.74 Aligned_cols=83 Identities=29% Similarity=0.477 Sum_probs=69.1
Q ss_pred eeCCCceEEEcCCeEEEEEEEe-ccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEE
Q psy15127 75 ISEPSDATVLSGSVVEFVCRVG-GDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRA 153 (633)
Q Consensus 75 ~~~~~~~~~~~G~~~~L~C~~~-~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~ 153 (633)
...+....+.+|++++|.|.+. +.|.+.+.|+|++....... ....++.|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 14 ~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 92 (98)
T 1gl4_B 14 VEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR-AMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTA 92 (98)
T ss_dssp ECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT-EEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce-eecCCCEEEEeCCChhhCEEEEEEecCCCCccccEE
Confidence 3445677899999999999998 68999999999865544333 334567999999999999999999999999988888
Q ss_pred EEEEE
Q psy15127 154 SLTVH 158 (633)
Q Consensus 154 ~l~V~ 158 (633)
.|.|.
T Consensus 93 ~l~V~ 97 (98)
T 1gl4_B 93 TLHVQ 97 (98)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88875
No 435
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.36 E-value=1.9e-12 Score=120.44 Aligned_cols=108 Identities=20% Similarity=0.242 Sum_probs=79.8
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-------------cCcCCeeeeCCCceEEEcCCeE-EEEEEEe-ccCCCeEEEEeCC
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-------------ALIKPFPISEPSDATVLSGSVV-EFVCRVG-GDPLPTILWRRDD 109 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-------------v~~~p~~~~~~~~~~~~~G~~~-~L~C~~~-~~p~p~i~W~~~~ 109 (633)
+++|.|.+++. +|.|+|.+.+ |..+|.+...+.... .+|+.+ .|.|.+. +.|.|.|+|++++
T Consensus 77 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 77 DASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp CCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred CceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 57899999999 9999999987 455676654443333 678888 4999987 8899999999975
Q ss_pred ccCCCCCeE-------EcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEEE
Q psy15127 110 GKMPTGRAK-------ILDDRSLQIENVGPQDEGLYICDVENLVGSISLRASL 155 (633)
Q Consensus 110 ~~i~~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~l 155 (633)
......... ....+.|.|.++..+|+|.|+|.|.|..+.....+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 156 GGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp SCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred CCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 543321111 1112479999999999999999999988765444443
No 436
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=8.9e-13 Score=107.60 Aligned_cols=93 Identities=17% Similarity=0.077 Sum_probs=74.3
Q ss_pred eeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccc
Q psy15127 504 TRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTA 583 (633)
Q Consensus 504 ~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~ 583 (633)
++|.+.+|.+|.++ .+..++.+++.|.|++| ...++.|++| .|+|+..+....
T Consensus 4 ~~T~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~~-- 56 (111)
T 1x5l_A 4 GSSGQAAPSQVVVI----------------RQERAGQTSVSLLWQEP--------EQPNGIILEY-EIKYYEKDKEMQ-- 56 (111)
T ss_dssp CCCSCCCCCCCCCE----------------ECSCBCSSCEEEEECCC--------SCCCSCCCEE-EEEEEESSSCCS--
T ss_pred EEcCCCCCCCCceE----------------EEEEcCCCEEEEEECCC--------CCCCCEEEEE-EEEEEECCCCce--
Confidence 56777788887776 78888999999999965 4567889999 999998754320
Q ss_pred eeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 584 VRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 584 ~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
.|. . .....+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 57 ---~~~-----~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 96 (111)
T 1x5l_A 57 ---SYS-----T--LKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQ 96 (111)
T ss_dssp ---SCE-----E--EEESSSEEEECSCCTTCEEEECEEEEETTEECCCCC
T ss_pred ---eEE-----E--ecCCCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcc
Confidence 111 1 234578999999999999999999999999999985
No 437
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=7.4e-13 Score=109.45 Aligned_cols=94 Identities=19% Similarity=0.177 Sum_probs=75.4
Q ss_pred ceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccc
Q psy15127 503 ITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAST 582 (633)
Q Consensus 503 ~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~ 582 (633)
.++|.+..|.+|.++ .+..++.++|.|+|++| .. .|.|++| .|+|+..+...
T Consensus 10 ~~~t~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~-~g~i~~Y-~v~~~~~~~~~-- 61 (118)
T 2yrz_A 10 DSRLTAGVPDTPTRL----------------VFSALGPTSLRVSWQEP--------RC-ERPLQGY-SVEYQLLNGGE-- 61 (118)
T ss_dssp TTSSSCSCCCCCCCC----------------EECCCBTTEEEEECCCC--------CC-SSCEEEE-EEEEEBSSSCC--
T ss_pred eeecCCCCCCCCCce----------------EEEeCCCCEEEEEeCCC--------CC-CCCccEE-EEEEEECCCCc--
Confidence 467788888888877 78889999999999965 22 2699999 99998876543
Q ss_pred ceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 583 AVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 583 ~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.... ......+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 62 -----~~~~~----~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 103 (118)
T 2yrz_A 62 -----LHRLN----IPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGRERE 103 (118)
T ss_dssp -----EEEEE----ESCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEEEE
T ss_pred -----eEEEE----cCCCCcCEEEeCCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 43221 1235688999999999999999999999999999874
No 438
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.35 E-value=2.5e-12 Score=106.07 Aligned_cols=93 Identities=31% Similarity=0.503 Sum_probs=73.6
Q ss_pred cCcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC------CeEEcccceEEEc-----cCCCCCCe
Q psy15127 68 ALIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG------RAKILDDRSLQIE-----NVGPQDEG 136 (633)
Q Consensus 68 v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~------~~~~~~~~~L~i~-----~v~~~d~G 136 (633)
+..+|.|...|....+.+|+.++|.|.+.|.|.|.++|+|++..+... ......++.+.+. +++.+|+|
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 356789999999999999999999999999999999999999887543 2334445555554 45799999
Q ss_pred EEEEEEEeCCceE-EEEEEEEEEee
Q psy15127 137 LYICDVENLVGSI-SLRASLTVHLL 160 (633)
Q Consensus 137 ~Y~C~~~n~~g~~-s~~~~l~V~~~ 160 (633)
.|+|.|.|..|.. +..+.|.+..+
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEEeCccceEeeeEEEEhhhh
Confidence 9999999999985 55666776654
No 439
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.35 E-value=2.1e-12 Score=130.14 Aligned_cols=179 Identities=10% Similarity=0.058 Sum_probs=91.3
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCC--eEEEEEe-eeeceEEEe--cCCCCCeEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTG--WVVAAHR-ITSTSITVS--DLKPDTSYM 483 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~-~~~~~~~i~--~L~p~~~Y~ 483 (633)
++.+|.++.+...+...+.++|+++... +....|.|.|+..+.... +...... .......+. ++.+++.|.
T Consensus 136 P~~~P~nl~C~~~~~~~l~csW~p~~~~----~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~ 211 (380)
T 3lb6_C 136 PETXVQDMDCVYYNWQYLLCSWKPGIGV----LLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFY 211 (380)
T ss_dssp TTSSCEEEEEEEETTTEEEEEEECC----------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEE
T ss_pred CCCCCcEeEEEECCCcEEEEEEcCCCCC----CCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEE
Confidence 4567888888888899999999998742 356789999987653221 1111111 122245554 568899999
Q ss_pred EEEEEEeccccCCCCCCCCceeecCC-CCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchh
Q psy15127 484 FIVRAENSHGLGIPSPVSPITRTLGL-NSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEA 562 (633)
Q Consensus 484 ~~v~a~n~~G~g~~s~~~~~~~t~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~ 562 (633)
|+|.|.|..|.+..+.. .+.+... .|.+|.++ ++...+++++.|+|++| .. ..+
T Consensus 212 i~V~a~n~~G~~~s~~~--~~~~~~~v~p~pP~~l----------------~v~~~~~~~l~l~W~~P------~~-~~~ 266 (380)
T 3lb6_C 212 ICVNGSSENKPIRSSYF--TFQLQNIVKPLPPVYL----------------TFTRESSCEIKLKWSIP------LG-PIP 266 (380)
T ss_dssp EEEEEC-----CCCEEE--EECGGGSCCCCCCEEE----------------EEC-------CEEEECC------SS-SCC
T ss_pred EEEEEEcCCeeeccccE--EEcHHHcccCCCCceE----------------EEEEcCCCeEEEEECCC------CC-CCC
Confidence 99999999998764322 2444443 45555454 66667788999999954 11 123
Q ss_pred hhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeec-cccceeEEEEEecccc---ccccccCC
Q psy15127 563 RARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTH-LRKFTKYEFFLVPFFK---TVEGARLD 633 (633)
Q Consensus 563 ~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~-L~~~t~Y~~~v~a~n~---~g~g~~s~ 633 (633)
+.+.+| .++|++.+ . .|+.... ..++.|.+ |+|++.|.|+|+|... .+.|.+|+
T Consensus 267 ~~~l~Y-ev~y~~~~-~-------~w~~~~~--------~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSe 324 (380)
T 3lb6_C 267 ARCFDY-EIEIREDD-T-------TLVTATV--------ENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSE 324 (380)
T ss_dssp STTEEE-EECC----------------CCEE--------SSSCC------------CCEEEEECTTTCSSCCCCC
T ss_pred cceEEE-EEEEEeCC-C-------CceEecc--------cceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCC
Confidence 578999 99998842 2 3653321 12578889 9999999999999955 34455543
No 440
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=1.2e-12 Score=109.35 Aligned_cols=104 Identities=12% Similarity=0.073 Sum_probs=77.2
Q ss_pred ceeecCCCCCCCc-chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcc
Q psy15127 503 ITRTLGLNSLVPQ-HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTAS 581 (633)
Q Consensus 503 ~~~t~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~ 581 (633)
.++|.+..|..+| ++ ++..+++++|.|+|++| .....+|.|++| .|+|+.......
T Consensus 6 ~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p------~~~~~~g~i~gY-~v~~~~~~~~~~ 62 (125)
T 1uen_A 6 SGHSGEDLPMVAPGNV----------------RVNVVNSTLAEVHWDPV------PLKSIRGHLQGY-RIYYWKTQSSSK 62 (125)
T ss_dssp CCCSCCCCCCCCCSSC----------------EEEEEETTEEEEECCCC------CHHHHCSCEEEE-EEEEEEESCCCC
T ss_pred EEECCCCCCCCCCcee----------------EEEecCCcEEEEEEcCC------CchhcCceEeEE-EEEEEECCCCcc
Confidence 4677777775444 55 78888999999999943 223467899999 999988765431
Q ss_pred cceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 582 TAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 582 ~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
..|.......+...+..++++|.+|+|++.|.|+|+|+|..|.|++|+
T Consensus 63 ----~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 110 (125)
T 1uen_A 63 ----RNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASP 110 (125)
T ss_dssp ----STTCCCCEEEEEEESSCSEEEEESCCSSCEEEEEEEEEESSCEEEECC
T ss_pred ----cccccccceEEEecCCccEEEeCCCCCCCEEEEEEEEecCCCCCCCCC
Confidence 112211122333456789999999999999999999999999999985
No 441
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=1.1e-12 Score=110.80 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=82.7
Q ss_pred ccCCCCCCCCceeecCCCCCCCc-chHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEE
Q psy15127 493 GLGIPSPVSPITRTLGLNSLVPQ-HLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVV 571 (633)
Q Consensus 493 G~g~~s~~~~~~~t~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i 571 (633)
|.|++|... .++|.+..|..+| ++ ++..++.++|.|+|++| .....++.|.+| .|
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l----------------~~~~~~~~sv~l~W~~p------~~~~~~g~i~~Y-~v 56 (132)
T 1x5h_A 1 GSSGSSGDV-AVRTLSDVPSAAPQNL----------------SLEVRNSKSIMIHWQPP------APATQNGQITGY-KI 56 (132)
T ss_dssp CCCCCCCCC-CCCCCCSSCCCCCEEE----------------EEECCSSSEEEEEEECC------CTTTCCSCEEEE-BC
T ss_pred CcCCCCCCE-EEeCCCCCCCCCCeee----------------EEEeCCCCEEEEEEeCC------CCcCCCceEeEE-EE
Confidence 678888776 5778888887555 45 78888999999999954 222268899999 99
Q ss_pred EEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 572 NLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 572 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+|+..+... |.. .+......++++|.+|++++.|.|+|+|.|..|.|++|+
T Consensus 57 ~~~~~~~~~-------~~~----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 107 (132)
T 1x5h_A 57 RYRKASRKS-------DVT----ETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATD 107 (132)
T ss_dssp EEEETTEEE-------EEE----CCBCCTTCCEEEEECCCSSCEEEEECEEEETTEEEEECC
T ss_pred EEEECCCCC-------ccE----EEEeCCCccEEEeCCCCCCCEEEEEEEEEcCCccCCCCc
Confidence 998865432 221 122456789999999999999999999999999999985
No 442
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=1e-12 Score=106.04 Aligned_cols=89 Identities=12% Similarity=0.097 Sum_probs=68.8
Q ss_pred ecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCccccee
Q psy15127 506 TLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVR 585 (633)
Q Consensus 506 t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~ 585 (633)
|...+|.+|..+ ++..+++++|.|+|++| .+.++.|++| .|+|+.....
T Consensus 3 t~~~~P~~P~~~----------------~~~~~s~~sv~l~W~~p--------~~~g~~i~~Y-~v~~~~~~~~------ 51 (106)
T 1x4x_A 3 SGSSGPDQCKPP----------------QVTCRSATCAQVNWEVP--------LSNGTDVTEY-RLEWGGVEGS------ 51 (106)
T ss_dssp SSCCSCCCCCCC----------------CCEEEETTEEEEECCCC--------SCSSSCCCEE-EEEEESSTTS------
T ss_pred CCCCCcCCCCCC----------------EEEEcCCCEEEEEEcCC--------CCCCCcceEE-EEEEEcCCCc------
Confidence 345566666666 78888999999999965 3344589999 9999876422
Q ss_pred eeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 586 ITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 586 ~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|.. + ..+..++++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 52 --~~~-----~-~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~ 91 (106)
T 1x4x_A 52 --MQI-----C-YCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSE 91 (106)
T ss_dssp --CCE-----E-EEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCC
T ss_pred --eEE-----E-EeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 211 1 123568999999999999999999999999999985
No 443
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.35 E-value=5e-13 Score=123.36 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=83.5
Q ss_pred CceEEee---CceEEEcCCCC--CCeEEEEEEe--------------cC----cCCeeeeCCCceEEEcCCeEEEEEEEe
Q psy15127 40 RRSRSIF---GSVLGARGALS--DDQWKLIAKE--------------AL----IKPFPISEPSDATVLSGSVVEFVCRVG 96 (633)
Q Consensus 40 ~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~--------------v~----~~p~~~~~~~~~~~~~G~~~~L~C~~~ 96 (633)
.|+.+.. +++|.|.+++. +|.|+|.|.+ +. .+|.+...+....+.+|+.++|.|.+.
T Consensus 57 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 136 (211)
T 3tv3_L 57 DRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLIS 136 (211)
T ss_dssp TTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEE
T ss_pred CcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEee
Confidence 4555332 35799999998 9999999987 22 456665555554445799999999998
Q ss_pred cc--CCCeEEEEeCCccCCCCCe----EEc------ccceEEEccCCCCCCeEEEEEEEeCCceEEEEE
Q psy15127 97 GD--PLPTILWRRDDGKMPTGRA----KIL------DDRSLQIENVGPQDEGLYICDVENLVGSISLRA 153 (633)
Q Consensus 97 ~~--p~p~i~W~~~~~~i~~~~~----~~~------~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~ 153 (633)
+. |.+.+.|+|+|..+..+.. ... ....|.|.++..+|+|.|+|.|.|..+...+.+
T Consensus 137 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 137 DFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred eecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 75 3578999999998754211 111 124699999999999999999999887655544
No 444
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.35 E-value=3.5e-12 Score=121.47 Aligned_cols=121 Identities=15% Similarity=0.133 Sum_probs=88.1
Q ss_pred CceEEeeC-----ceEEEcCCCC--CCeEEEEEEec-----------------CcCCeeeeCCCceEEEcCCeEEEEEEE
Q psy15127 40 RRSRSIFG-----SVLGARGALS--DDQWKLIAKEA-----------------LIKPFPISEPSDATVLSGSVVEFVCRV 95 (633)
Q Consensus 40 ~~~~~~~~-----~~L~i~~v~~--~G~Y~C~a~~v-----------------~~~p~~~~~~~~~~~~~G~~~~L~C~~ 95 (633)
.|+.+..+ .+|.|.+++. +|.|+|.+.+. ..+|.+...|..+.+.+|++++|.|.+
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~ 145 (256)
T 1nqb_A 66 SKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRS 145 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEE
T ss_pred CeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEe
Confidence 56666542 4799999998 99999999872 223455566777789999999999999
Q ss_pred eccCCC-----eEEEEe--CCccCC-------------CCCeEEc---ccceEEEccCCCCCCeEEEEEEEeCCce-EEE
Q psy15127 96 GGDPLP-----TILWRR--DDGKMP-------------TGRAKIL---DDRSLQIENVGPQDEGLYICDVENLVGS-ISL 151 (633)
Q Consensus 96 ~~~p~p-----~i~W~~--~~~~i~-------------~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~~~n~~g~-~s~ 151 (633)
.+.|.+ .+.|+| ++..+. ..++... ....|+|.+++.+|+|.|+|.|.+.... ...
T Consensus 146 ~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~ 225 (256)
T 1nqb_A 146 SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGG 225 (256)
T ss_dssp SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECC
T ss_pred cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECC
Confidence 988765 899999 555431 1233322 2357999999999999999999875332 344
Q ss_pred EEEEEEEee
Q psy15127 152 RASLTVHLL 160 (633)
Q Consensus 152 ~~~l~V~~~ 160 (633)
...|.|..+
T Consensus 226 gt~l~V~~~ 234 (256)
T 1nqb_A 226 GTKLEIKRA 234 (256)
T ss_dssp CEEEEECC-
T ss_pred CEEEEEECC
Confidence 556777655
No 445
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.34 E-value=1.1e-13 Score=127.94 Aligned_cols=165 Identities=17% Similarity=0.159 Sum_probs=103.2
Q ss_pred CCee-eeCCCceEEEcCCeEEEEEEEeccCC---CeEEEEeCCccCCCCC---------eEEcccceEEEccCCCCCCeE
Q psy15127 71 KPFP-ISEPSDATVLSGSVVEFVCRVGGDPL---PTILWRRDDGKMPTGR---------AKILDDRSLQIENVGPQDEGL 137 (633)
Q Consensus 71 ~p~~-~~~~~~~~~~~G~~~~L~C~~~~~p~---p~i~W~~~~~~i~~~~---------~~~~~~~~L~i~~v~~~d~G~ 137 (633)
+|.+ +..|....+.+|++++|.|.+.+.+. +.|+| + +..+.... ........|.|.+++.+|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 3444 45577777899999999999988754 68999 4 43332110 011123468889999999999
Q ss_pred EEEEEEeCCceEEEEEEEE---EEeecccccc-CCCceEEecCCcEEEEEeCCCCCCC-CeEEEEECCEEeccCCCe---
Q psy15127 138 YICDVENLVGSISLRASLT---VHLLRDDFRA-EPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDLESSK--- 209 (633)
Q Consensus 138 Y~C~~~n~~g~~s~~~~l~---V~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~~~~~--- 209 (633)
|+|.|.+..+.......|. +..+ |.+.+ .+....+..|+.+.|.|.+...+|. +.|.|+|||..+......
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~~~~~~~-P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 159 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSKSGNTFR-PEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWA 159 (214)
T ss_dssp EEEEECCSSCSSCEEEEEECCSSCCC-CEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECC
T ss_pred EEEEEecCCCCCceeEeeccCCCCCC-CEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecC
Confidence 9999998765432222332 2233 54433 2233345679999999995443564 599999999987654211
Q ss_pred eEEe---ccceeeeE---EE-------eeeEEEEeecCCCCC
Q psy15127 210 SLDL---SRRTLGWL---RV-------RPLYWNVARPRANLN 238 (633)
Q Consensus 210 ~~~~---~~~~~~~~---~~-------~g~y~C~a~~~~~~~ 238 (633)
.... .++++.+. .+ .+.|+|.|.|.....
T Consensus 160 ~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~~ 201 (214)
T 1ow0_A 160 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 201 (214)
T ss_dssp CEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCTT
T ss_pred CcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCCC
Confidence 1122 23333221 11 268999999986543
No 446
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.34 E-value=7.3e-12 Score=102.03 Aligned_cols=102 Identities=24% Similarity=0.329 Sum_probs=80.0
Q ss_pred CCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEe-eeeceEEEecCCCCCeEEEEE
Q psy15127 408 LFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHR-ITSTSITVSDLKPDTSYMFIV 486 (633)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v 486 (633)
..|++|..+++...+.+++.|+|.++...+ +.++.+|.|+|+..+. ..|...... .....+++.+|.+++.|.|+|
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~--~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV 83 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIG--AGGIDGYLVEYCLEGS-EEWVPANKEPVERCGFTVKDLPTGARILFRV 83 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCC--SSCCCEEEEEEEETTC-CCCEESSSSCBSSSEEEEECCCTTCCEEEEE
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCC--CCcccEEEEEEEECCC-CceEEccccCCcccEEEECCCCCCCEEEEEE
Confidence 356778788888889999999999998653 4569999999987653 456643221 346789999999999999999
Q ss_pred EEEeccccCCCCCCCCceeecCCCCC
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGLNSL 512 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~~p~ 512 (633)
+|.|..|.|.+|.....+++.+..|.
T Consensus 84 ~A~n~~G~s~~S~~~~~v~~~~~~P~ 109 (111)
T 1x5y_A 84 VGVNIAGRSEPATLLQPVTIRESGPS 109 (111)
T ss_dssp EEEETTEECCCCCCSSCBCCCCCCCC
T ss_pred EEEcCCcCCCCccCCCCEEecCCCCC
Confidence 99999999999877655666555443
No 447
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=104.33 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=63.8
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
++..++.++|.|+|++| ...++.|++| .|+|+..+... |... . ...++++|.+|+|+
T Consensus 15 ~~~~~~~~si~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~-------~~~~-----~--~~~~~~~i~~L~p~ 71 (106)
T 2ed8_A 15 QAVSTSPTSILITWEPP--------AYANGPVQGY-RLFCTEVSTGK-------EQNI-----E--VDGLSYKLEGLKKF 71 (106)
T ss_dssp EEECSSTTEEEEEEECC--------SSCSSCCCEE-EEEEEETTTCC-------EEEE-----E--ECSSCEEEESCCTT
T ss_pred EEEecCCCEEEEEECCC--------CCCCCCeeEE-EEEEEECCCCc-------eEEE-----e--CCccEEEECCCCCC
Confidence 78888999999999965 3567899999 99999876543 4321 1 13789999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|.|..|.|++|+
T Consensus 72 t~Y~~~V~A~n~~G~g~~S~ 91 (106)
T 2ed8_A 72 TEYSLRFLAYNRYGPGVSTD 91 (106)
T ss_dssp CEEEEEEEEECSSCEEEECC
T ss_pred CEEEEEEEEEeCCccCCCcC
Confidence 99999999999999999885
No 448
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.34 E-value=1.7e-12 Score=104.72 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=67.9
Q ss_pred eeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCC
Q psy15127 421 TTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPV 500 (633)
Q Consensus 421 ~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~ 500 (633)
...+++.|+|.++. +|+.+|.+|.|+|+..+...+|.........+.++|.+|.|++.|+|+|.|.|..|.|.+|..
T Consensus 19 ~~~~sv~L~W~p~~---dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~ 95 (114)
T 2kbg_A 19 SSGKSFKLSITKQD---DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 95 (114)
T ss_dssp CSTTCEEEEECCCC---CSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEEEE
T ss_pred cCCCEEEEEEECCC---CCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcCC
Confidence 57899999999865 457999999999999865455654444556678999999999999999999999999998764
Q ss_pred CCceeecCC
Q psy15127 501 SPITRTLGL 509 (633)
Q Consensus 501 ~~~~~t~~~ 509 (633)
.++|...
T Consensus 96 --~~~T~~~ 102 (114)
T 2kbg_A 96 --EFSMPPK 102 (114)
T ss_dssp --EECCCCC
T ss_pred --EEEcCCC
Confidence 3656444
No 449
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.34 E-value=2.8e-12 Score=122.29 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=88.2
Q ss_pred CceEEeeC-----ceEEEcCCCC--CCeEEEEEEe----------------cCc----------------CCeeeeCCCc
Q psy15127 40 RRSRSIFG-----SVLGARGALS--DDQWKLIAKE----------------ALI----------------KPFPISEPSD 80 (633)
Q Consensus 40 ~~~~~~~~-----~~L~i~~v~~--~G~Y~C~a~~----------------v~~----------------~p~~~~~~~~ 80 (633)
.|+.+..+ .+|.|.+++. +|.|.|.+.+ |.. +|.+...|..
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 147 (256)
T 3umt_A 68 GKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSS 147 (256)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSE
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCe
Confidence 46666543 2499999998 9999999976 221 5667777777
Q ss_pred eEEEcCCeEEEEEEEeccCCCeEEEEeCC--ccCC-------------CCCeEEcc---cceEEEccCCCCCCeEEEEEE
Q psy15127 81 ATVLSGSVVEFVCRVGGDPLPTILWRRDD--GKMP-------------TGRAKILD---DRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 81 ~~~~~G~~~~L~C~~~~~p~p~i~W~~~~--~~i~-------------~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
..+.+|++++|.|.+.+.+.+.+.|+|+. ..+. .+++.... ..+|+|.+++.+|+|.|+|.|
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 148 LSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp EEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEE
Confidence 88999999999999998888899999942 2111 12333222 246999999999999999999
Q ss_pred EeCCce-EEEEEEEEEEee
Q psy15127 143 ENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 143 ~n~~g~-~s~~~~l~V~~~ 160 (633)
.+.... ....+.|.|...
T Consensus 228 ~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 228 YASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CSSSSCEECCCEEEEEC--
T ss_pred eeCCCcEECCCEEEEEECC
Confidence 875433 345567788765
No 450
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.34 E-value=5e-12 Score=102.55 Aligned_cols=91 Identities=21% Similarity=0.356 Sum_probs=72.9
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCc-cC--------CCCCeEEc----ccceEEEccCCCCCC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDG-KM--------PTGRAKIL----DDRSLQIENVGPQDE 135 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~-~i--------~~~~~~~~----~~~~L~i~~v~~~d~ 135 (633)
...|.+...|.++.+.+|++++|.|.+.+.|.+.+.|++++. .+ ..++.... .+..|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 346777888899999999999999999998889999999775 21 22344433 346899999999999
Q ss_pred eEEEEEEEeCCceEEEEEEEEEEee
Q psy15127 136 GLYICDVENLVGSISLRASLTVHLL 160 (633)
Q Consensus 136 G~Y~C~~~n~~g~~s~~~~l~V~~~ 160 (633)
|.|+|.+.| .+..+..+.|.|..+
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEECC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEcC
Confidence 999999999 788889999999876
No 451
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.34 E-value=2.2e-13 Score=125.93 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=80.9
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe---------------c----CcCCeeeeCCCceEEEcCCeEEEEEEE
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE---------------A----LIKPFPISEPSDATVLSGSVVEFVCRV 95 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~---------------v----~~~p~~~~~~~~~~~~~G~~~~L~C~~ 95 (633)
.|+.+... .+|.|.+++. +|.|+|.|.| + ..+|.+...+....+.+|+.++|.|.+
T Consensus 58 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~ 137 (212)
T 1nfd_E 58 ERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLV 137 (212)
T ss_dssp TTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEE
T ss_pred ccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEE
Confidence 46655432 3799999998 9999999994 1 244555554544445679999999999
Q ss_pred ecc-CC-CeEEEEeCCccCCCCCeE---------EcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 96 GGD-PL-PTILWRRDDGKMPTGRAK---------ILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 96 ~~~-p~-p~i~W~~~~~~i~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.+. |. +.|+|+|+|..+..+... ....+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 138 ~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 138 NDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp EEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred EeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 876 54 799999999877543210 111246999999999999999999998765
No 452
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.34 E-value=2e-12 Score=120.67 Aligned_cols=121 Identities=21% Similarity=0.262 Sum_probs=77.7
Q ss_pred eCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC------------------CCCCeEEccc-----ceEEEc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM------------------PTGRAKILDD-----RSLQIE 128 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i------------------~~~~~~~~~~-----~~L~i~ 128 (633)
.+|+.+.+.+|++++|.|.+.+. +...+.|+|.. ... ..+|+....+ .+|+|.
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (226)
T 3mlr_H 5 VESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWT 84 (226)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEES
T ss_pred EcCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEEC
Confidence 34557889999999999999753 34579999843 111 0134433322 359999
Q ss_pred cCCCCCCeEEEEEEEeCCc---------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCC-CCeEE
Q psy15127 129 NVGPQDEGLYICDVENLVG---------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQP-EPTLH 195 (633)
Q Consensus 129 ~v~~~d~G~Y~C~~~n~~g---------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i~ 195 (633)
+++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+.+|+.+.|.|.+....| .+.+.
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~ 164 (226)
T 3mlr_H 85 TLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 164 (226)
T ss_dssp SCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEE
T ss_pred CCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEE
Confidence 9999999999999976421 1122345666532 133322222223457999999999655456 45888
Q ss_pred E
Q psy15127 196 W 196 (633)
Q Consensus 196 W 196 (633)
|
T Consensus 165 W 165 (226)
T 3mlr_H 165 W 165 (226)
T ss_dssp E
T ss_pred E
Confidence 9
No 453
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.34 E-value=2.9e-12 Score=122.10 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=75.3
Q ss_pred CCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCC--ccC------------------CCCCeEEccc-----ceEEEcc
Q psy15127 77 EPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDD--GKM------------------PTGRAKILDD-----RSLQIEN 129 (633)
Q Consensus 77 ~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~--~~i------------------~~~~~~~~~~-----~~L~i~~ 129 (633)
.++.+.+.+|++++|.|.+.+. ....+.|+|.. ... ..+|+....+ .+|+|.+
T Consensus 29 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 108 (256)
T 3sob_H 29 ESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNS 108 (256)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECC
Confidence 3456779999999999999753 24579999842 111 0134433322 2499999
Q ss_pred CCCCCCeEEEEEEEeCCc-----------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCC-CCeE
Q psy15127 130 VGPQDEGLYICDVENLVG-----------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQP-EPTL 194 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g-----------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~i 194 (633)
++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+.+|+.++|.|.+....| ...+
T Consensus 109 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v 188 (256)
T 3sob_H 109 LRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 188 (256)
T ss_dssp CCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEE
T ss_pred CCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEE
Confidence 999999999999986431 1233446677531 233332233334568999999999655456 4588
Q ss_pred EE
Q psy15127 195 HW 196 (633)
Q Consensus 195 ~W 196 (633)
.|
T Consensus 189 ~W 190 (256)
T 3sob_H 189 SW 190 (256)
T ss_dssp EE
T ss_pred EE
Confidence 89
No 454
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.34 E-value=2.5e-12 Score=99.84 Aligned_cols=83 Identities=16% Similarity=0.324 Sum_probs=62.1
Q ss_pred cCCeeeeCCCceEE--EcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEE
Q psy15127 70 IKPFPISEPSDATV--LSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVE 143 (633)
Q Consensus 70 ~~p~~~~~~~~~~~--~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~ 143 (633)
.||.|...+.+..+ .+|+.+.|.|.+.+ |.+.++|+|||..+..+ +..+..+ ..|.|.+++.+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 35666666555544 58999999999865 88899999999999765 3333332 379999999999999999985
Q ss_pred eCCceEEEEEEEEE
Q psy15127 144 NLVGSISLRASLTV 157 (633)
Q Consensus 144 n~~g~~s~~~~l~V 157 (633)
|. +..+.|+|
T Consensus 82 n~----~~~~~ltV 91 (91)
T 2lvc_A 82 DE----CAYFTVTI 91 (91)
T ss_dssp SC----EEEEEEEC
T ss_pred ce----EEEEEEEC
Confidence 53 45555553
No 455
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.34 E-value=1.2e-12 Score=123.11 Aligned_cols=110 Identities=14% Similarity=0.176 Sum_probs=81.1
Q ss_pred CCceEEe---eCceEEEcCCCC--CCeEEEEEEe-------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEec
Q psy15127 39 SRRSRSI---FGSVLGARGALS--DDQWKLIAKE-------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGG 97 (633)
Q Consensus 39 ~~~~~~~---~~~~L~i~~v~~--~G~Y~C~a~~-------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~ 97 (633)
..|+.+. .+++|.|.+++. +|.|+|.+.+ + ..+|.+...+....+.+|+.++|.|.+.+
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~ 161 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 161 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcc
Confidence 3465554 345799999998 9999999976 1 34566655554444557899999999987
Q ss_pred -cC-CCeEEEEeCCccCCCCC-----------eEEcccceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 98 -DP-LPTILWRRDDGKMPTGR-----------AKILDDRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 98 -~p-~p~i~W~~~~~~i~~~~-----------~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.| .+.|+|+|+|..+..+. ........|.|..+..+|+|.|+|.|.|....
T Consensus 162 ~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 162 FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred cCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 44 57999999999886431 11111246889999999999999999998654
No 456
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.34 E-value=1.5e-12 Score=120.30 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=81.5
Q ss_pred CCceEEee---CceEEEcCCCC--CCeEEEEEEe-------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEec
Q psy15127 39 SRRSRSIF---GSVLGARGALS--DDQWKLIAKE-------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGG 97 (633)
Q Consensus 39 ~~~~~~~~---~~~L~i~~v~~--~G~Y~C~a~~-------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~ 97 (633)
..|+.+.. +.+|.|.+++. +|.|+|.|.+ + ..+|.+...+....+..|+.++|.|.+.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g 138 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNN 138 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEee
Confidence 34665543 34799999998 9999999976 2 45666766666655667889999999987
Q ss_pred cCC--CeEEEEeCCccCCCCC-eEE----cc------cceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 98 DPL--PTILWRRDDGKMPTGR-AKI----LD------DRSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 98 ~p~--p~i~W~~~~~~i~~~~-~~~----~~------~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.++ +.+.|+|+|..+..+. ... .. ...|.|.....+|+|.|+|.|.|....
T Consensus 139 ~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 139 FYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred ecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 654 3899999999876532 110 01 236888888889999999999997643
No 457
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=1e-12 Score=106.58 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=64.6
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
.+..++.+++.|+|++| ..+++..|++| .|+|+..+... |...+. .....+.|++.+|+++
T Consensus 18 ~v~~v~~~sv~L~W~~P-------~~~gg~~i~~Y-~Ve~~~~~~~~-------w~~~~~----~~~~~~~~~v~~L~p~ 78 (112)
T 1bpv_A 18 VPLNITRHTVTLKWAKP-------EYTGGFKITSY-IVEKRDLPNGR-------WLKANF----SNILENEFTVSGLTED 78 (112)
T ss_dssp EEEEEETTEEEEECCCC-------SCCTTCCCSCC-EEEEEETTSCC-------CEECCC----SCCCSSEEEECSCCSS
T ss_pred EEEEeeCCEEEEEECCC-------CcCCCCcccEE-EEEEEECCCCc-------eEEeec----ccCccCEEEECCCCCC
Confidence 67778999999999955 12445679999 99999876543 765432 1234788999999999
Q ss_pred eeEEEEEeccccccc-cccCC
Q psy15127 614 TKYEFFLVPFFKTVE-GARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~-g~~s~ 633 (633)
+.|.|+|+|.|..|. |++|+
T Consensus 79 t~Y~frV~A~N~~G~~s~~S~ 99 (112)
T 1bpv_A 79 AAYEFRVIAKNAAGAISPPSE 99 (112)
T ss_dssp CCEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEEEEECCCCCCCCCC
Confidence 999999999999997 99874
No 458
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.33 E-value=2.4e-12 Score=104.91 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=64.3
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
++..++.+++.|+|++| . .+++..|++| .|+|+..+... |...... ....+.+++.+|+++
T Consensus 16 ~~~~~~~~sv~l~W~~p------~-~~~~~~i~~Y-~v~~~~~~~~~-------w~~~~~~----~~~~~~~~v~~L~p~ 76 (111)
T 1x5y_A 16 TVEDVTDTTTTLKWRPP------D-RIGAGGIDGY-LVEYCLEGSEE-------WVPANKE----PVERCGFTVKDLPTG 76 (111)
T ss_dssp EEEEECSSEEEEEEECC------S-CCCSSCCCEE-EEEEEETTCCC-------CEESSSS----CBSSSEEEEECCCTT
T ss_pred EEEeccCCEEEEEECCC------C-cCCCCcccEE-EEEEEECCCCc-------eEEcccc----CCcccEEEECCCCCC
Confidence 78889999999999965 1 1234459999 99998876543 7644321 134789999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|.|..|.|++|+
T Consensus 77 t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 77 ARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp CCEEEEEEEEETTEECCCCC
T ss_pred CEEEEEEEEEcCCcCCCCcc
Confidence 99999999999999999984
No 459
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.33 E-value=6.2e-12 Score=112.40 Aligned_cols=107 Identities=10% Similarity=0.041 Sum_probs=75.5
Q ss_pred CceEE-eeCceEEEcCCCC--CCeEEEEEEecCc-----CCeeeeC-CCceEEEcCCeEEEEEEE-eccCCCeEEEEeCC
Q psy15127 40 RRSRS-IFGSVLGARGALS--DDQWKLIAKEALI-----KPFPISE-PSDATVLSGSVVEFVCRV-GGDPLPTILWRRDD 109 (633)
Q Consensus 40 ~~~~~-~~~~~L~i~~v~~--~G~Y~C~a~~v~~-----~p~~~~~-~~~~~~~~G~~~~L~C~~-~~~p~p~i~W~~~~ 109 (633)
.|+.+ ..+++|.|.+++. +|.|+|.+.+... ...+... +.......+..++|.|.+ .+ |.|.|+|++++
T Consensus 60 ~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~ 138 (180)
T 2dru_A 60 DRVDLDKTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEG-TDVELKLYQGK 138 (180)
T ss_dssp TTEEECTTTCCEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSC-TTCEEEEEETT
T ss_pred CeEEEeCCCccEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCC-CCCEEEEEECC
Confidence 47777 5678999999999 9999999866110 0011111 111222356779999999 56 89999999999
Q ss_pred ccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCceEEEEEE
Q psy15127 110 GKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGSISLRAS 154 (633)
Q Consensus 110 ~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~~~ 154 (633)
..+. ...+.+|.+.. .+|+|.|+|.|.|..+..+....
T Consensus 139 ~~l~-----~~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 139 EHLR-----SLRQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EEEE-----EESSSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred eECc-----CCCCCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 8775 12345676633 78999999999999987665543
No 460
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.33 E-value=1.8e-12 Score=107.55 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=62.5
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhh-hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeecccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARA-RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRK 612 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~-i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~ 612 (633)
.+..++.+ +.|+|++| ...+|. |++| .|+|+...... |... ...+......+.++|.+|++
T Consensus 15 ~~~~~~~t-v~l~W~~P--------~~~~G~pI~~Y-~v~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~i~~L~p 76 (122)
T 2e3v_A 15 QVEPYSST-AQVQFDEP--------EATGGVPILKY-KAEWRAVGEEV-------WHSK-WYDAKEASMEGIVTIVGLKP 76 (122)
T ss_dssp EEEECSSC-EEEEEECC--------CCC--CCEEEE-EEEEEETTCCS-------CEEE-EEEHHHHHTTTEEEECSCCT
T ss_pred EEEecCCc-EEEEECCC--------CcCCCCcceEE-EEEEEECCCCC-------cccc-eeeeeecCccceEEeCCCCC
Confidence 67777777 99999965 456676 9999 99999887644 5211 01112234578999999999
Q ss_pred ceeEEEEEeccccccccccCC
Q psy15127 613 FTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 613 ~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
++.|.|+|+|.|.+|.|++|+
T Consensus 77 ~t~Y~~rV~A~n~~G~g~~S~ 97 (122)
T 2e3v_A 77 ETTYAVRLAALNGKGLGEISA 97 (122)
T ss_dssp TCEEEEEEEEEETTEECCCCC
T ss_pred CCEEEEEEEEEeCCccCCCcc
Confidence 999999999999999999985
No 461
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.33 E-value=1.3e-11 Score=113.68 Aligned_cols=180 Identities=19% Similarity=0.229 Sum_probs=119.8
Q ss_pred CCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEE--EEEeeeeceEEEecCC--CCCeEEEEEE
Q psy15127 412 PPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVV--AAHRITSTSITVSDLK--PDTSYMFIVR 487 (633)
Q Consensus 412 ~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~L~--p~~~Y~~~v~ 487 (633)
+|.++++...+-.. .|.|.++... +.....|.|+|+.-+. ..|.. .+..+..+...|+++. ++..|.+||+
T Consensus 11 ~P~nv~~~s~n~~~-iL~W~p~~~~---~~~~~~Y~Vqy~~~~~-~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~ 85 (221)
T 4doh_R 11 KPANITFLSINMKN-VLQWTPPEGL---QGVKVTYTVQYFIYGQ-KKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR 85 (221)
T ss_dssp CCEEEEEEEETTEE-EEEEECCCCS---SCCCCEEEEEEEETTS-CCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEE
T ss_pred CCceeEEEEECCcE-EEEEcCCCCC---CCCCeEEEEEEEECCC-CCceecccccCCCCCEEeCCCccccCCCCEEEEEE
Confidence 46777777765555 5999998632 2467899999997543 56764 3344556788888864 5678999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhh----
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEAR---- 563 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~---- 563 (633)
|.++.+.+.++.... +.+.......||.+ .+. ....+|.|.|.+| .....+++|
T Consensus 86 A~~g~~~S~w~~~~~-F~p~~~t~igPP~v----------------~v~-~~~~~l~V~~~~P----~~~~~~~~~~~~s 143 (221)
T 4doh_R 86 AIWGTKCSKWAESGR-FYPFLETQIGPPEV----------------ALT-TDEKSISVVLTAP----EKWKRNPEDLPVS 143 (221)
T ss_dssp EESSSCBCCCEECCC-BCHHHHCBCCCCEE----------------EEE-CCSSCEEEEEECC----BCCCSSTTSCCCB
T ss_pred EEcCCcccCCEecCc-eechhhCccCCCEE----------------EEE-ECCCEEEEEEeCC----CcccccCCCCceE
Confidence 999888888765432 32222222223333 555 4678999999965 111111122
Q ss_pred -----hhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccc--ccccccCC
Q psy15127 564 -----ARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFK--TVEGARLD 633 (633)
Q Consensus 564 -----~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~--~g~g~~s~ 633 (633)
....| .|.|.+.+... .+. ... ....+.|.+|+|++.|.|+|+|... .|.|.+|+
T Consensus 144 ~~~i~~~l~Y-~V~y~~~~~~~------~~~----~~~----~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~ 205 (221)
T 4doh_R 144 MQQIYSNLKY-NVSVLNTKSNR------TWS----QCV----TNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSE 205 (221)
T ss_dssp HHHHSTTCEE-EEEEEETTTTE------EEE----EEE----CSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCE
T ss_pred HHHhcCceEE-EEEEEECCCCc------EEE----Eee----cCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCC
Confidence 14689 99998876543 111 111 2468899999999999999999975 68888873
No 462
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=3.4e-12 Score=105.97 Aligned_cols=99 Identities=28% Similarity=0.424 Sum_probs=79.1
Q ss_pred CCCCCCc--EEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEE--EeeeeceEEEecCCCCCeEEEE
Q psy15127 410 PGPPAAP--VILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAA--HRITSTSITVSDLKPDTSYMFI 485 (633)
Q Consensus 410 p~~p~~~--~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~~~Y~~~ 485 (633)
|.+|..+ .......+++.|+|.++. +++.++.+|.|+|+..+ ..|.... .......++|.+|.|++.|.|+
T Consensus 18 P~~P~~~~~~~~~~~~~sv~l~W~~p~---~~~~~i~~Y~v~~~~~~--~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~fr 92 (121)
T 1wf5_A 18 PHAPEHPVATLSTVERRAINLTWTKPF---DGNSPLIRYILEMSENN--APWTVLLASVDPKATSVTVKGLVPARSYQFR 92 (121)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCC---CCSSCEEEEEEEEECTT--CCCEEEESSCCTTCCEEEEESCCTTCEEEEE
T ss_pred CccCCCcceeeEeccCCEEEEEEcCCC---CCCCcceEEEEEEEcCC--CCceEeEcccCCCccEEEECCcCCCCEEEEE
Confidence 4568888 677778899999999985 23678999999999765 5676431 2234678999999999999999
Q ss_pred EEEEeccccCCCCCCCCceeecCCCCCC
Q psy15127 486 VRAENSHGLGIPSPVSPITRTLGLNSLV 513 (633)
Q Consensus 486 v~a~n~~G~g~~s~~~~~~~t~~~~p~~ 513 (633)
|+|.|..|.|+++.....++|.+.+|..
T Consensus 93 V~A~n~~G~s~~S~~~~~~~t~~~~P~~ 120 (121)
T 1wf5_A 93 LCAVNDVGKGQFSKDTERVSLPESGPSS 120 (121)
T ss_dssp EEEEESSCEEEECCCCSCEECCCCSSCC
T ss_pred EEEEcCCccCCCcCCcceeEcCCCCCCC
Confidence 9999999999998876557777776654
No 463
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.33 E-value=6.5e-12 Score=120.79 Aligned_cols=183 Identities=16% Similarity=0.212 Sum_probs=89.2
Q ss_pred CCCCCCeEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceEEecCCcEEEEEeCCCCCCCCeEEEEEC--CEEec---
Q psy15127 130 VGPQDEGLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKN--GQFID--- 204 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~--~~~~~--- 204 (633)
.+++|.+.|.|.+.+..|.......+.| ...|....+.+|++++|.|.+ .+ +.+.+.|+|. +....
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v-------~~~p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~ 73 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKV-------IQTPRYLVKGQGQKAKMRCIP-EK-GHPVVFWYQQNKNNEFKFLI 73 (270)
T ss_dssp -------------------------CCC-------EEECSEEEEETTSCEEEEEEC-CT-TCCEEEEEEECTTCCEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeE-------EeCCCeEEEcCCCCEEEEEEe-cC-CCceEEEEEECCCCCcEEEE
Confidence 4578999999999988776544443333 344566789999999999994 44 6789999982 21100
Q ss_pred -cCCCe----------eEEec-----cceeeeEEE----eeeEEEEeecCCCC-------CCcccccc------cceeEE
Q psy15127 205 -LESSK----------SLDLS-----RRTLGWLRV----RPLYWNVARPRANL-------NPRYIGRK------MASLLI 251 (633)
Q Consensus 205 -~~~~~----------~~~~~-----~~~~~~~~~----~g~y~C~a~~~~~~-------~p~~~~~~------~~~~~~ 251 (633)
..... .+... ...|.+.++ .|.|.|.+.+.... ...+.... .+...+
T Consensus 74 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~ 153 (270)
T 3qib_D 74 NFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAV 153 (270)
T ss_dssp EEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEE
T ss_pred EECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEE
Confidence 00000 11110 112222222 48999999863211 00111110 111111
Q ss_pred -------ecCCceEEEEEEEee-ecCC-eeEEEECCEEEEeccC-----------CccceEEEccCceEEEcCCCCCC-C
Q psy15127 252 -------WNHPRVNRLSCFAEG-SPLP-SVFWTQEGSQVLMFPG-----------NAYGHLHVTQEGTLRIQGVQKED-A 310 (633)
Q Consensus 252 -------~~~g~~~~l~C~~~g-~p~~-~v~W~~~g~~~~~~~~-----------~~~~~~~~~~~~~l~i~~~~~~d-~ 310 (633)
+..|+.++|.|.+.| .|.+ .+.|+++|..+..... .....+. ....|.|.....+| .
T Consensus 154 ~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d~~ 231 (270)
T 3qib_D 154 FEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYA--LSSRLRVSATFWQNPR 231 (270)
T ss_dssp EECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEE--EEEEEEEEHHHHHSTT
T ss_pred ECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEE--EEEEEEEcHHHhccCC
Confidence 123789999999998 5556 8999999988742100 0011111 12357787777777 9
Q ss_pred eEEEEEEEeCCce
Q psy15127 311 GFFVCSALSVAGS 323 (633)
Q Consensus 311 G~Y~C~a~n~~g~ 323 (633)
|.|+|.|.|....
T Consensus 232 g~YtC~v~~~~l~ 244 (270)
T 3qib_D 232 NHFRCQVQFYGLS 244 (270)
T ss_dssp CEEEEEEEECCBC
T ss_pred CeEEEEEEecCCC
Confidence 9999999987543
No 464
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=2.1e-11 Score=100.89 Aligned_cols=101 Identities=20% Similarity=0.289 Sum_probs=80.8
Q ss_pred CCCCCCCcEEE-EeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 409 FPGPPAAPVIL-NTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 409 ~p~~p~~~~~~-~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
.|++|..+.+. ....+++.|+|.+|...+ +.++.+|.|+|+..+....|.... ....+.++|.+|.|++.|.|+|+
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~g--g~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~ 93 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNG--GATINKYVVEMAEGSNGNKWEMIY-SGATREHLCDRLNPGCFYRLRVY 93 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCC--SSCCCEEEEEEEESSSSCCCEEEE-CSSCSEEEECSCCTTSCEEEEEE
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCC--CCeeeEEEEEEccCCCCcCCEEEE-eccccEEEECCCCCCCEEEEEEE
Confidence 46778888777 778999999999998653 568999999999876545676543 33567899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCC
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLV 513 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~ 513 (633)
|.|..|.|++|... .++|...+|.+
T Consensus 94 A~n~~G~s~~S~~~-~~~T~~~~p~p 118 (120)
T 2crm_A 94 CISDGGQSAVSESL-LVQTPAVSGPS 118 (120)
T ss_dssp EEETTEECCCCCCC-CCCCCCCSCCS
T ss_pred EEcCCccCCCcccE-EEEcCCCCCCC
Confidence 99999999998776 46666655443
No 465
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=6.7e-12 Score=105.09 Aligned_cols=105 Identities=23% Similarity=0.299 Sum_probs=81.3
Q ss_pred CCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecC-CCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 410 PGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDL-QTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 410 p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
|++|..+.+...+.+++.|+|.++. ++++++.+|.|+|+.... ...|.............+.+|.|++.|.|+|+|
T Consensus 17 P~~P~~~~~~~~~~~sv~l~W~p~~---~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 93 (127)
T 1uey_A 17 PNPPFDLELTDQLDKSVQLSWTPGD---DNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMA 93 (127)
T ss_dssp CCCCEEEEEECCSSSCEEEEEECCC---CCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEE
T ss_pred CcCCCCcEEEEccCCEEEEEEECCC---CCCCCceEEEEEEEECCCCCCccEEEeeeCCCceEEEecCCCCCEEEEEEEE
Confidence 4567777788888999999999875 336889999999987643 356765443322223368899999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCcch
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQHL 517 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~~~ 517 (633)
.|..|.|++|.....++|.+.+|..+|..
T Consensus 94 ~n~~G~s~~S~~~~~~~T~~~~P~~~P~~ 122 (127)
T 1uey_A 94 VNSIGKSLPSEASEQYLTKASEPDKNPTS 122 (127)
T ss_dssp EESSCBCCCCSCCCCEECCCSSCSSCSSC
T ss_pred EeCCccCCccccccceEcCCCCCCCCCce
Confidence 99999999998855688888888776543
No 466
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=1.4e-11 Score=100.13 Aligned_cols=102 Identities=26% Similarity=0.302 Sum_probs=81.3
Q ss_pred CCCCCCCCcEE-EEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEE
Q psy15127 408 LFPGPPAAPVI-LNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIV 486 (633)
Q Consensus 408 ~~p~~p~~~~~-~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v 486 (633)
..|++|..+.+ .....+++.|+|.+|...+ +.++.+|.|+|+..+. ..|.... ......++|.+|.|++.|.|+|
T Consensus 7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~--~~~i~~Y~v~~~~~~~-~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV 82 (110)
T 2crz_A 7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDG--GSPISCYSVEMSPIEK-DEPREVY-QGSEVECTVSSLLPGKTYSFRL 82 (110)
T ss_dssp CCCCCCCCCEECSCCCSSEEEEECCCCSCCT--TSCCCEEEEEEECTTS-CCCEEEE-EESCSEEEEESCCTTCEEEECC
T ss_pred CCCCCCCCceeccccCCCEEEEEeCCCCCCC--CceeEEEEEEEEeCCC-CceEEEE-eCCcEEEEECCcCCCCEEEEEE
Confidence 35778888887 4577889999998886543 5789999999987543 4565443 3457889999999999999999
Q ss_pred EEEeccccCCCCCCCCceeecCCCCCCC
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGLNSLVP 514 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~~p~~~ 514 (633)
+|.|..|.|++|... .+.|...+|.+|
T Consensus 83 ~A~n~~G~g~~S~~~-~~~T~~~~P~~P 109 (110)
T 2crz_A 83 RAANKMGFGPFSEKC-DITTAPGSGPSS 109 (110)
T ss_dssp EEECSSCBCCCCCCE-EEECCCSCCCCC
T ss_pred EEEcCCccCCCCCcc-ccccCCCCCCCC
Confidence 999999999999876 467777776655
No 467
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.33 E-value=5.6e-12 Score=102.21 Aligned_cols=94 Identities=20% Similarity=0.329 Sum_probs=75.4
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcccc---eEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDDR---SLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+....+.+|+.++|.|.+.+. |.+.|+|++..+..+ ++....++ .|.|.+++.+|+|.|+|.|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-- 82 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG-- 82 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET--
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc--
Confidence 57888888899999999999999999764 689999999988653 44444444 49999999999999999993
Q ss_pred CceEEEEEEEEEEeeccccccCCC
Q psy15127 146 VGSISLRASLTVHLLRDDFRAEPK 169 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~~p~~~~~~~ 169 (633)
..+..+.|.|..+++.+...+.
T Consensus 83 --n~~~~~~l~V~~~p~~~~~~~~ 104 (108)
T 2dm7_A 83 --QERTSATLTVRALPARFTEGSG 104 (108)
T ss_dssp --TEEEEEECEEECCCSSCCCCCC
T ss_pred --CCEEEEEEEEecCCHHHccCcc
Confidence 4577888999987565555444
No 468
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=6.2e-12 Score=104.11 Aligned_cols=79 Identities=20% Similarity=0.237 Sum_probs=60.4
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhh----cceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeec
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARAR----LGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTH 609 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i----~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~ 609 (633)
++..+++++|.|+|++| ...++.+ .+| .|+|+...... ..|.. + ....++++|.|
T Consensus 26 ~~~~~s~tsi~lsW~~p--------~~~~~~i~~~~~~Y-~v~y~~~~~~~-----~~~~~-----~--~~~~~~~~v~g 84 (123)
T 2edd_A 26 QAVALTHDAVRVSWADN--------SVPKNQKTSEVRLY-TVRWRTSFSAS-----AKYKS-----E--DTTSLSYTATG 84 (123)
T ss_dssp EEEEEETTEEEEEEECS--------SSCSSCCCSCCCCE-EEEEEETTCTT-----CCCCC-----E--EESSSEEEEES
T ss_pred EEEEcCCCeEEEEecCC--------CCCcccccCcCceE-EEEEEECCCCC-----ccEEE-----E--eCCceEEEecC
Confidence 88899999999999954 2233334 499 99999874322 11221 1 12478999999
Q ss_pred cccceeEEEEEeccccccccccCC
Q psy15127 610 LRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 610 L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|+|++.|.|+|+|.|..|+|++|+
T Consensus 85 L~P~T~Y~f~V~A~n~~g~g~~S~ 108 (123)
T 2edd_A 85 LKPNTMYEFSVMVTKNRRSSTWSM 108 (123)
T ss_dssp CCTTCEEEEEEEECCSSSCCCCCC
T ss_pred CCCCCEEEEEEEEeCCCcccCCCC
Confidence 999999999999999999999985
No 469
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.33 E-value=4.1e-12 Score=117.24 Aligned_cols=113 Identities=17% Similarity=0.151 Sum_probs=80.8
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe-------------c----CcCCeeeeCCCceEEEcCCeEEEEEEEec
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE-------------A----LIKPFPISEPSDATVLSGSVVEFVCRVGG 97 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~-------------v----~~~p~~~~~~~~~~~~~G~~~~L~C~~~~ 97 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+ + ..+|.+...+....+.+|+.++|.|.+.+
T Consensus 62 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 141 (212)
T 1q0x_L 62 ARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITD 141 (212)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred ccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEE
Confidence 45655432 3799999998 9999999988 1 13455544443333447899999999987
Q ss_pred cC-CC-eEEEEeCCccCCCCCeE----Ecc------cceEEEccCCCCCCeEEEEEEEeCCceEEEE
Q psy15127 98 DP-LP-TILWRRDDGKMPTGRAK----ILD------DRSLQIENVGPQDEGLYICDVENLVGSISLR 152 (633)
Q Consensus 98 ~p-~p-~i~W~~~~~~i~~~~~~----~~~------~~~L~i~~v~~~d~G~Y~C~~~n~~g~~s~~ 152 (633)
.+ .+ .|+|+|+|..+..+... ... ...|.|.++..+|+|.|+|.|.|......+.
T Consensus 142 ~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 142 FYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp EBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred EeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 54 43 89999999887654211 111 2368999999999999999999987654433
No 470
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.9e-12 Score=107.23 Aligned_cols=94 Identities=14% Similarity=0.126 Sum_probs=75.2
Q ss_pred eeecCCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccc
Q psy15127 504 TRTLGLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTA 583 (633)
Q Consensus 504 ~~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~ 583 (633)
..+.+.+|.+|.++ ++..++.++|.|+|++| .+.++.|.+| .|+|+......
T Consensus 11 ~~~~~~~P~~P~~l----------------~~~~~~~~sv~l~W~~p--------~~~~~~i~~Y-~v~~~~~~~~~--- 62 (119)
T 2ed7_A 11 IPSSSVLPSAPRDV----------------VPVLVSSRFVRLSWRPP--------AEAKGNIQTF-TVFFSREGDNR--- 62 (119)
T ss_dssp CCCSSSSCCCCSCC----------------EEEEECSSCEEEECCCC--------SCCSSCEEEE-EEEEEESSCCC---
T ss_pred CCCCCCCCcCCcce----------------EEEecCCCEEEEEEeCC--------CCCCCcEEEE-EEEEEeCCCCc---
Confidence 45667778777777 78888999999999965 3467899999 99998876543
Q ss_pred eeeeeeccceeEeecCCccceEEeeccccceeEEEEEeccccccccccCC
Q psy15127 584 VRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 584 ~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|... .......+.++|.+|+|++.|.|+|+|.|..|.|++|+
T Consensus 63 ----~~~~----~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 104 (119)
T 2ed7_A 63 ----ERAL----NTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQ 104 (119)
T ss_dssp ----CEEE----ECCCTTCCEEEECSCCSSSEEEECCEEEESSCBCSCCC
T ss_pred ----ceee----EeecCCceEEEeCCCCCCCEEEEEEEEEcCCccCCCcC
Confidence 3211 12335688999999999999999999999999999985
No 471
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=4.1e-12 Score=104.19 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=64.4
Q ss_pred eeeec--ccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccc
Q psy15127 534 ELIPT--ASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLR 611 (633)
Q Consensus 534 ~~~~~--~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~ 611 (633)
++..+ +.++|.|+|++| ...+|.|.+| .|+|+...... ...|. ........++++|.+|+
T Consensus 16 ~~~~~~~~~~sv~l~W~~p--------~~~~g~i~~Y-~v~~~~~~~~~----~~~~~-----~~~~~~~~~~~~i~~L~ 77 (114)
T 2ede_A 16 TVITREGKPRAVIVSWQPP--------LEANGKITAY-ILFYTLDKNIP----IDDWI-----METISGDRLTHQIMDLN 77 (114)
T ss_dssp EEEECSSCSSCEEEEEECC--------SSCSSCCSEE-EEEEESCSSSC----TTTSE-----EEEEETTCCEEEECSCC
T ss_pred EEEEccCCCCEEEEEECCC--------CCCCCceeEE-EEEEEeCCCCC----ccceE-----EEEECCCceEEEEcCCC
Confidence 66666 789999999965 4567899999 99998754332 01232 22234678999999999
Q ss_pred cceeEEEEEeccccccccccCC
Q psy15127 612 KFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 612 ~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
|++.|.|+|+|.|..|.|++|+
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~ 99 (114)
T 2ede_A 78 LDTMYYFRIQARNSKGVGPLSD 99 (114)
T ss_dssp SSCEEEEEEEEECSSCBCCCCC
T ss_pred CCCEEEEEEEEEeCCcCcCCcc
Confidence 9999999999999999999985
No 472
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.32 E-value=5.4e-12 Score=101.28 Aligned_cols=85 Identities=22% Similarity=0.281 Sum_probs=70.0
Q ss_pred CCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC---eEEccc---ceEEEccCCCCCCeEEEEEEEe
Q psy15127 71 KPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR---AKILDD---RSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 71 ~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~---~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
++.|...+.++.+.+|++++|.|.+.+ |.+.+.|+|++..+..+. +.+..+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 344778888999999999999999977 678999999999886543 233332 5899999999999999999976
Q ss_pred CCceEEEEEEEEEEee
Q psy15127 145 LVGSISLRASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~ 160 (633)
.+..+.|.|..+
T Consensus 86 ----~~~~~~l~V~~~ 97 (103)
T 1x44_A 86 ----GQSSAKLSVDLK 97 (103)
T ss_dssp ----EEEEEEEEEECC
T ss_pred ----CcEEEEEEEeCC
Confidence 567788888876
No 473
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.32 E-value=2.2e-12 Score=119.50 Aligned_cols=109 Identities=17% Similarity=0.289 Sum_probs=77.9
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEecC-----------------cCCeeeeCCCceEEEcCCeEEEEEEEec
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKEAL-----------------IKPFPISEPSDATVLSGSVVEFVCRVGG 97 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~v~-----------------~~p~~~~~~~~~~~~~G~~~~L~C~~~~ 97 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+.. .+|.+...+......+|+.++|.|.+.+
T Consensus 61 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 140 (216)
T 2xzc_L 61 DRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 140 (216)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred CceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEe
Confidence 46665432 3799999998 999999998711 2344443332222335899999999987
Q ss_pred -cCCC-eEEEEeCCccCCCC-CeEE----ccc------ceEEEccCCCCCCeEEEEEEEeCCce
Q psy15127 98 -DPLP-TILWRRDDGKMPTG-RAKI----LDD------RSLQIENVGPQDEGLYICDVENLVGS 148 (633)
Q Consensus 98 -~p~p-~i~W~~~~~~i~~~-~~~~----~~~------~~L~i~~v~~~d~G~Y~C~~~n~~g~ 148 (633)
.|.+ .|+|+|+|..+..+ .... ..+ +.|.|.++..+|+|.|+|.|.|....
T Consensus 141 ~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 141 FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred EcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 4554 89999999988655 1111 111 26999999999999999999997654
No 474
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.32 E-value=4.1e-12 Score=116.04 Aligned_cols=180 Identities=12% Similarity=0.075 Sum_probs=101.5
Q ss_pred CCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEE--EEEeeeeceEEEec--CCCCCeEEEEEE
Q psy15127 412 PPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVV--AAHRITSTSITVSD--LKPDTSYMFIVR 487 (633)
Q Consensus 412 ~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~--L~p~~~Y~~~v~ 487 (633)
+|.++.+...+-..+ |+|+++... .+....|.|+|+..+ ...|.. .+..+..+.+.|++ +.++..|.+||+
T Consensus 10 ~P~nv~~~s~n~~~i-L~W~p~~~~---~~~~~~Y~Vqy~~~~-~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~ 84 (211)
T 3g9v_A 10 KPQRVQFQSRNFHNI-LQWQPGRAL---TGNSSVYFVQYKIYG-QRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVR 84 (211)
T ss_dssp CCEEEEEEEETTEEE-EEEECCCC------CCCEEEEEEEETT-CSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEE
T ss_pred CCceeEEEEEcCceE-EEECCCCCC---CCCCeEEEEEEEECC-CCceEECccCCCCCCCEECCCCcccccCccEEEEEE
Confidence 377777766665555 999999843 223678999999765 356764 44556667777864 478999999999
Q ss_pred EEeccccCCCCCCCCceeec-CCCCCCCcchHHHHHHHhCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhh--
Q psy15127 488 AENSHGLGIPSPVSPITRTL-GLNSLVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARA-- 564 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~-- 564 (633)
|.++.|.+.++.... +.+. ...+ .||.+ ++.... .+|.|.|++| .....+.+|.
T Consensus 85 A~~~~~~S~ws~~~~-f~~~~~t~i-~PP~v----------------~v~~~~-~si~V~~~~P----~~~~~~~ng~~~ 141 (211)
T 3g9v_A 85 AASAGSYSEWSMTPR-FTPWWETKI-DPPVM----------------NITQVN-GSLLVILHAP----NLPYRYQKEKNV 141 (211)
T ss_dssp EEETTEECCCEECCC-BCHHHHCBC-CCCEE----------------ECC------CCCEEECC----CCGGGGCSSCSS
T ss_pred EECCCCcCCCEecCc-ccccccCcc-CCCEE----------------EEEEcC-CEEEEEEECC----CCccccCCCcee
Confidence 999999998865442 3232 2222 23333 555554 4999999965 1111112232
Q ss_pred ------hcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEEEEEecccc--ccccccCC
Q psy15127 565 ------RLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYEFFLVPFFK--TVEGARLD 633 (633)
Q Consensus 565 ------i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~v~a~n~--~g~g~~s~ 633 (633)
...| .|+|.+.+... + ..+ .......++|.+|+|++.|.|+|+|+.. ...|++|+
T Consensus 142 ~~~~~~~l~Y-~v~y~~~~~~~--------~----~~~-~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~ 204 (211)
T 3g9v_A 142 SIEDYYELLY-RVFIINNSLEK--------E----QKV-YEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSE 204 (211)
T ss_dssp CHHHHTTCEE-EEEEC--------------C----EEE-EEESSCCCC----------CEEEEEEETTTTEECCCCC
T ss_pred eehhcceeEE-EEEEEECCCcc--------E----EEE-EecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCC
Confidence 4669 88887664432 0 111 1234678999999999999999999853 34566553
No 475
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.32 E-value=1.2e-11 Score=119.37 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=83.9
Q ss_pred CCceEEeeCc---eEEEcCCCC--CCeEEEEEEe-------------cCcC--------------CeeeeCCCceEEEcC
Q psy15127 39 SRRSRSIFGS---VLGARGALS--DDQWKLIAKE-------------ALIK--------------PFPISEPSDATVLSG 86 (633)
Q Consensus 39 ~~~~~~~~~~---~L~i~~v~~--~G~Y~C~a~~-------------v~~~--------------p~~~~~~~~~~~~~G 86 (633)
..|+.+..++ +|.|.+++. +|.|+|.+.| |..+ +.++..|....+.+|
T Consensus 70 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G 149 (276)
T 3auv_A 70 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPG 149 (276)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTT
T ss_pred CCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCC
Confidence 3466655433 799999998 9999999987 2221 123344567789999
Q ss_pred CeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEccc-----ceEEEccCCCCCCeEEE
Q psy15127 87 SVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILDD-----RSLQIENVGPQDEGLYI 139 (633)
Q Consensus 87 ~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~ 139 (633)
++++|.|.+.+.+ .+.+.|+|++ ..+ ..+++....+ ..|.|.+++.+|+|.|+
T Consensus 150 ~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 229 (276)
T 3auv_A 150 GSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYY 229 (276)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEE
Confidence 9999999998766 5899999963 211 1234443322 37999999999999999
Q ss_pred EEEEeCC---ce--EEEEEEEEEEee
Q psy15127 140 CDVENLV---GS--ISLRASLTVHLL 160 (633)
Q Consensus 140 C~~~n~~---g~--~s~~~~l~V~~~ 160 (633)
|.|.|.. +. ......|.|...
T Consensus 230 C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 230 CARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp EEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred EEEEcCcCCcCceEECCCEEEEEccc
Confidence 9999973 21 223456666543
No 476
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.32 E-value=1.2e-11 Score=117.27 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=86.4
Q ss_pred CceEEeeC-----ceEEEcCCCC--CCeEEEEEEe--------------cCc---------------CCeeeeCCCceEE
Q psy15127 40 RRSRSIFG-----SVLGARGALS--DDQWKLIAKE--------------ALI---------------KPFPISEPSDATV 83 (633)
Q Consensus 40 ~~~~~~~~-----~~L~i~~v~~--~G~Y~C~a~~--------------v~~---------------~p~~~~~~~~~~~ 83 (633)
.|+.+..+ .+|.|.+++. +|.|+|.|.+ |.. ++.+...+..+.+
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 147 (247)
T 2ghw_B 68 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSL 147 (247)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEE
T ss_pred CcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEe
Confidence 46666542 4799999998 9999999977 111 2345556667789
Q ss_pred EcCCeEEEEEEEeccCCCeEEEEe--CCccCC-------------CCCeEEcc---cceEEEccCCCCCCeEEEEEEEeC
Q psy15127 84 LSGSVVEFVCRVGGDPLPTILWRR--DDGKMP-------------TGRAKILD---DRSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 84 ~~G~~~~L~C~~~~~p~p~i~W~~--~~~~i~-------------~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|++++|.|.+.+.+.+.++|+| ++..+. ..++.... ..+|+|.+++.+|+|.|+|.|.|.
T Consensus 148 ~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 227 (247)
T 2ghw_B 148 SPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSN 227 (247)
T ss_dssp CTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSS
T ss_pred cCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccC
Confidence 999999999999998888999999 555431 12333221 246999999999999999999875
Q ss_pred Cce-EEEEEEEEEE
Q psy15127 146 VGS-ISLRASLTVH 158 (633)
Q Consensus 146 ~g~-~s~~~~l~V~ 158 (633)
... ......|.|.
T Consensus 228 ~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 228 WPPTFGQGTKVEVK 241 (247)
T ss_dssp SSCEECCCEEEEEC
T ss_pred CCceEcCCEEEEEC
Confidence 332 3344566665
No 477
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.32 E-value=4e-12 Score=120.97 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=88.3
Q ss_pred CceEEeeCc-----eEEEcCCCC--CCeEEEEEEe-------------cCc---------------CCeeeeCCCceEEE
Q psy15127 40 RRSRSIFGS-----VLGARGALS--DDQWKLIAKE-------------ALI---------------KPFPISEPSDATVL 84 (633)
Q Consensus 40 ~~~~~~~~~-----~L~i~~v~~--~G~Y~C~a~~-------------v~~---------------~p~~~~~~~~~~~~ 84 (633)
.|+.+..++ +|.|.+++. +|.|+|.+.+ +.. +|.+...|....+.
T Consensus 67 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~ 146 (253)
T 3uzq_A 67 GKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVS 146 (253)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEEC
T ss_pred CcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEe
Confidence 466665432 399999998 9999999987 222 46677777788999
Q ss_pred cCCeEEEEEEEeccCCC----eEEEEeCC--ccCC-------------CCCeEEcc---cceEEEccCCCCCCeEEEEEE
Q psy15127 85 SGSVVEFVCRVGGDPLP----TILWRRDD--GKMP-------------TGRAKILD---DRSLQIENVGPQDEGLYICDV 142 (633)
Q Consensus 85 ~G~~~~L~C~~~~~p~p----~i~W~~~~--~~i~-------------~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~ 142 (633)
+|++++|.|.+.+.+.+ .+.|+|++ ..+. .+++.... ..+|+|.+++.+|+|.|+|.|
T Consensus 147 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 226 (253)
T 3uzq_A 147 LGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQR 226 (253)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 99999999999988776 89999952 2211 12332221 246999999999999999999
Q ss_pred EeCCce-EEEEEEEEEEee
Q psy15127 143 ENLVGS-ISLRASLTVHLL 160 (633)
Q Consensus 143 ~n~~g~-~s~~~~l~V~~~ 160 (633)
.|..+. ......|.|...
T Consensus 227 ~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 227 SNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp CSSSSCCBCCCEEEEECCC
T ss_pred ccCCCcEECCCEEEEEcCC
Confidence 886443 344566777765
No 478
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=9.7e-12 Score=100.43 Aligned_cols=100 Identities=30% Similarity=0.399 Sum_probs=81.8
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRA 488 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a 488 (633)
.|++|..+.+.....+++.|+|.++. ++.+.+|.|+|+..+....|... .......++|.+|.|++.|.|+|+|
T Consensus 7 ~P~~P~~~~~~~~~~~sv~l~W~~~~-----~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2dju_A 7 GPKPPIDLVVTETTATSVTLTWDSGN-----SEPVTYYGIQYRAAGTEGPFQEV-DGVATTRYSIGGLSPFSEYAFRVLA 80 (106)
T ss_dssp SCCCCEEEEEEEEETTEEEEEEECCC-----SSCCSEEEEEEEETTCCSCCCCB-CCCCSSEEEEESCCTTCEEEEEEEE
T ss_pred CCcCCCCcEEEeccCCEEEEEEcCCC-----CCCceEEEEEEEECCCCCCeEEc-cCCCccEEEEeCCCCCcEEEEEEEE
Confidence 46678888888889999999999884 46899999999987655556532 2234678999999999999999999
Q ss_pred EeccccCCCCCCCCceeecCCCCCCCc
Q psy15127 489 ENSHGLGIPSPVSPITRTLGLNSLVPQ 515 (633)
Q Consensus 489 ~n~~G~g~~s~~~~~~~t~~~~p~~~~ 515 (633)
.|..|.|.+|... .++|.+.+|..||
T Consensus 81 ~n~~G~~~~S~~~-~~~T~~~~P~~Pp 106 (106)
T 2dju_A 81 VNSIGRGPPSEAV-RARTGEQSGPSSG 106 (106)
T ss_dssp ECSSCBCCCCCCE-EEECCCSSCCCCC
T ss_pred EeCCccCCCcccE-EeEcCCCCCCCCC
Confidence 9999999998876 5788888777764
No 479
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.31 E-value=8.9e-12 Score=118.32 Aligned_cols=105 Identities=14% Similarity=0.211 Sum_probs=76.2
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe-------------cCc-------------------CCeeeeCCCceE
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE-------------ALI-------------------KPFPISEPSDAT 82 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~-------------v~~-------------------~p~~~~~~~~~~ 82 (633)
.|+.+..+ .+|.|.+++. +|.|.|.|.+ +.. ++.+...+....
T Consensus 63 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (250)
T 3esu_F 63 SRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEL 142 (250)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEE
T ss_pred CCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceE
Confidence 45554432 2799999998 9999999976 222 233455567788
Q ss_pred EEcCCeEEEEEEEeccC--CCeEEEEeC--CccCC------------------CCCeEEccc-----ceEEEccCCCCCC
Q psy15127 83 VLSGSVVEFVCRVGGDP--LPTILWRRD--DGKMP------------------TGRAKILDD-----RSLQIENVGPQDE 135 (633)
Q Consensus 83 ~~~G~~~~L~C~~~~~p--~p~i~W~~~--~~~i~------------------~~~~~~~~~-----~~L~i~~v~~~d~ 135 (633)
+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. .+++....+ .+|+|.+++.+|+
T Consensus 143 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 222 (250)
T 3esu_F 143 VKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDS 222 (250)
T ss_dssp ECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccC
Confidence 99999999999998766 779999997 43321 133333322 2699999999999
Q ss_pred eEEEEEEEe
Q psy15127 136 GLYICDVEN 144 (633)
Q Consensus 136 G~Y~C~~~n 144 (633)
|.|+|.+.+
T Consensus 223 G~Y~C~~~~ 231 (250)
T 3esu_F 223 AVYFCARSG 231 (250)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999999987
No 480
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=5.7e-12 Score=105.10 Aligned_cols=121 Identities=16% Similarity=0.198 Sum_probs=87.6
Q ss_pred EEEEEcCCcceeEEEEEEeecCCCCCceecCCCCCCCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEE
Q psy15127 373 TCTASSESGETSWSASLSVEPRPGPHAVHRMPDSGLFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFS 452 (633)
Q Consensus 373 ~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~ 452 (633)
++.|.|..|....+..+.+...+ ..++.+|..+.+...+.+++.|+|.+|.... .++.+.+|.|+|+.
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~-----------~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~-~~g~i~~Y~v~~~~ 70 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLS-----------DVPSAPPQNVSLEVVNSRSIKVSWLPPPSGT-QNGFITGYKIRHRK 70 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCC-----------CCCSSCCBSCCEEEEETTEEEEECBCCCTTT-CCSCCCEEEEEEEE
T ss_pred eEEEEeCCccCCCCCCEEEEcCC-----------CCCCCCCeeeEEEEcCCCEEEEEEECcCCcC-CCcEEeEEEEEEEE
Confidence 45677888865433333332221 1223367788888889999999999998632 25789999999998
Q ss_pred ecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEEEEeccccCCCCCCCCceeecC
Q psy15127 453 SDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVRAENSHGLGIPSPVSPITRTLG 508 (633)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~~t~~ 508 (633)
.+... |... .......++|.+|.|++.|.|+|+|.|..|.|++|... .++|.+
T Consensus 71 ~~~~~-~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~e 123 (124)
T 2ed9_A 71 TTRRG-EMET-LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWY-TAETPE 123 (124)
T ss_dssp SSSSC-CEEE-ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCE-EEECCC
T ss_pred CCCCc-ceEE-ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE-EEECCC
Confidence 76433 3322 34456889999999999999999999999999998776 455543
No 481
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.31 E-value=6.1e-12 Score=119.85 Aligned_cols=112 Identities=20% Similarity=0.294 Sum_probs=81.5
Q ss_pred ceEEEcCCCC--CCeEEEEEEe----------------cC--------------------cCCeeeeCCCceEEEcCCeE
Q psy15127 48 SVLGARGALS--DDQWKLIAKE----------------AL--------------------IKPFPISEPSDATVLSGSVV 89 (633)
Q Consensus 48 ~~L~i~~v~~--~G~Y~C~a~~----------------v~--------------------~~p~~~~~~~~~~~~~G~~~ 89 (633)
.+|.|.+++. +|.|+|.+.+ |. .+|.+...|....+.+|+++
T Consensus 76 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v 155 (256)
T 3tf7_C 76 FHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENV 155 (256)
T ss_dssp EEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCE
T ss_pred EEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcE
Confidence 4699999998 9999999976 11 14567777888888999999
Q ss_pred EEEEEEeccCCCeEEEEeCCccCC------------------CCCeEEc----ccceEEEccCCCCCCeEEEEEEEeCCc
Q psy15127 90 EFVCRVGGDPLPTILWRRDDGKMP------------------TGRAKIL----DDRSLQIENVGPQDEGLYICDVENLVG 147 (633)
Q Consensus 90 ~L~C~~~~~p~p~i~W~~~~~~i~------------------~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~n~~g 147 (633)
+|.|.+.+. .+.+.|+|+..... .+++... ...+|+|.+++.+|+|.|+|.|.|..|
T Consensus 156 ~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 156 TLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp EECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred EEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 999999876 67899998432110 1122221 134799999999999999999998766
Q ss_pred eE--EEEEEEEEEee
Q psy15127 148 SI--SLRASLTVHLL 160 (633)
Q Consensus 148 ~~--s~~~~l~V~~~ 160 (633)
.. -....|.|...
T Consensus 235 ~~~fG~gt~l~v~~~ 249 (256)
T 3tf7_C 235 QLYFGEGSKLTVLEL 249 (256)
T ss_dssp EEEECCCEEEEEECG
T ss_pred ccEECCCeEEEEEcc
Confidence 52 23345666543
No 482
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=100.71 Aligned_cols=101 Identities=27% Similarity=0.388 Sum_probs=79.9
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEE-eeeeceEEEecCCCCCeEEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAH-RITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
.|++|..+.+.....+++.|+|.+|...+ +.++.+|.|+|+..+. ..|..... ....+.+++.+|.+++.|.|+|+
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~g--~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2yuw_A 7 GTSPPTLLTVDSVTDTTVTMRWRPPDHIG--AAGLDGYVLEYCFEGT-EDWIVANKDLIDKTKFTITGLPTDAKIFVRVK 83 (110)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCSSCC--SSCEEEEEEEEEETTC-SSEEECCSSCCCSSEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCccEEEeccCCeEEEEECCCCCCC--CCCccEEEEEEEECCC-ccceEeccccCccCEEEECCCCCCCEEEEEEE
Confidence 46777778888888999999999988653 5689999999998653 56765422 23567899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCC
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSL 512 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~ 512 (633)
|.|..|.|++|.....+++.+..|.
T Consensus 84 A~n~~G~s~~S~~~~~v~~~~~~P~ 108 (110)
T 2yuw_A 84 AVNAAGASEPKYYSQPILVKESGPS 108 (110)
T ss_dssp EEETTEECCCEECSSCEECCCCCCC
T ss_pred EEcCCcCCCCcCCCCCEEecCCCCC
Confidence 9999999999877655656555443
No 483
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.31 E-value=8.8e-12 Score=113.93 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=73.5
Q ss_pred CceEEEcCCCC--CCeEEEEEEe-----------------c---CcCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEE
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE-----------------A---LIKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTIL 104 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~-----------------v---~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~ 104 (633)
++.|.|.+++. +|.|+|.+.+ + ..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.
T Consensus 62 ~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~ 139 (201)
T 1nkr_A 62 KANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYH 139 (201)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEE
T ss_pred eEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEE
Confidence 47799999998 9999999964 1 12456665554 46899999999999875 567899
Q ss_pred EEeCCccCCCCC-eEE-c---ccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 105 WRRDDGKMPTGR-AKI-L---DDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 105 W~~~~~~i~~~~-~~~-~---~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
|+|+|..+.... ... . ....|.|.+++ |+|.|+|.|.+..
T Consensus 140 w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 140 LSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 999998775321 111 1 14689999998 9999999998653
No 484
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3.2e-12 Score=104.01 Aligned_cols=81 Identities=16% Similarity=0.061 Sum_probs=64.8
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
++..++.+++.|+|++| . .++++.|++| .|+|+..+... |...... ....+.++|.+|+++
T Consensus 15 ~~~~~~~~sv~l~W~~p------~-~~g~~~i~~Y-~v~~~~~~~~~-------w~~~~~~----~~~~~~~~v~~L~p~ 75 (110)
T 2yuw_A 15 TVDSVTDTTVTMRWRPP------D-HIGAAGLDGY-VLEYCFEGTED-------WIVANKD----LIDKTKFTITGLPTD 75 (110)
T ss_dssp EEEEECSSCEEEEEECC------S-SCCSSCEEEE-EEEEEETTCSS-------EEECCSS----CCCSSEEEECSCCTT
T ss_pred EEEeccCCeEEEEECCC------C-CCCCCCccEE-EEEEEECCCcc-------ceEeccc----cCccCEEEECCCCCC
Confidence 78888999999999965 1 2345679999 99999876543 7644321 235789999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|.|..|.|++|+
T Consensus 76 t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 76 AKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp CEEEEEEEEEETTEECCCEE
T ss_pred CEEEEEEEEEcCCcCCCCcC
Confidence 99999999999999999874
No 485
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.1e-12 Score=102.20 Aligned_cols=84 Identities=27% Similarity=0.501 Sum_probs=70.0
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCCeEEcccceEEEccCCCCCCeEEEEEEEeCCce-
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGRAKILDDRSLQIENVGPQDEGLYICDVENLVGS- 148 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~- 148 (633)
.+|.+...|....+.+|+.++|.|.+.+.|.+.+.|+|++..+... .+..|.|.+++.+|+|.|+|.|.|..+.
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 83 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-----PSPVLILPEIGPQDQGTYSCVATHSSHGP 83 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-----CCSEEEEESCCTTTCEEEECEECCSSCCC
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-----CCCEEEECCCCcccCEEEEEEEEeCCCCc
Confidence 4577888888889999999999999999999999999999887653 2468999999999999999999996554
Q ss_pred -EEEEEEEEEE
Q psy15127 149 -ISLRASLTVH 158 (633)
Q Consensus 149 -~s~~~~l~V~ 158 (633)
.+..+.|.|.
T Consensus 84 ~~s~~~~v~V~ 94 (96)
T 2ens_A 84 QESRAVSISII 94 (96)
T ss_dssp EECCCEEEEEC
T ss_pred EEEEEEEEEEe
Confidence 3445555554
No 486
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.31 E-value=4.5e-12 Score=103.85 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=65.2
Q ss_pred eeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccc
Q psy15127 534 ELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKF 613 (633)
Q Consensus 534 ~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~ 613 (633)
++..++.++|.|+|++| .....++.|++| .|+|+..+.... ..|. . ..+.+..++++|.+|+|+
T Consensus 16 ~~~~~~~~si~l~W~~p------~~~~~~g~i~gY-~v~y~~~~~~~~----~~~~---~--~~~~~~~~~~~i~~L~p~ 79 (114)
T 1x4y_A 16 FTDAVNETTIMLKWMYI------PASNNNTPIHGF-YIYYRPTDSDND----SDYK---K--DMVEGDRYWHSISHLQPE 79 (114)
T ss_dssp EEECSSSSCEEEEEECC------CTTSCCCCCCEE-EEEECCTTSCSG----GGCC---C--EEEETTCCEEEECSCCTT
T ss_pred EEEecCCCEEEEEEeCC------CchhcCCccceE-EEEEEECCCCCC----ccee---e--EecCCcEeEEEcCCCCCC
Confidence 78888999999999954 223578999999 999987755410 0121 1 122355688999999999
Q ss_pred eeEEEEEeccccccccccCC
Q psy15127 614 TKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 614 t~Y~~~v~a~n~~g~g~~s~ 633 (633)
+.|.|+|+|+|.+|+|++|+
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~ 99 (114)
T 1x4y_A 80 TSYDIKMQCFNEGGESEFSN 99 (114)
T ss_dssp CEEEEEEEEECTTCCCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcC
Confidence 99999999999999999985
No 487
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=6e-12 Score=102.95 Aligned_cols=92 Identities=24% Similarity=0.425 Sum_probs=69.9
Q ss_pred hCCceEEeeeeeecccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccce
Q psy15127 525 LGTKVVNLRELIPTASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTS 604 (633)
Q Consensus 525 ~~~~~~~~~~~~~~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 604 (633)
+....+.+..+..+++++|.|+|+++ ..++.|+|| .|.|+..+.... ...|... .+ ..+..++
T Consensus 14 l~~~~v~l~~~~a~sstsi~vsW~~~---------~~~g~i~gY-~V~Y~~~~~~~~---~~~~~~~---~v-~~~~~~~ 76 (120)
T 1ujt_A 14 LGDVLVRLHNPVVLTPTTVQVTWTVD---------RQPQFIQGY-RVMYRQTSGLQA---TSSWQNL---DA-KVPTERS 76 (120)
T ss_dssp HHHCCEEECCCCCCBTTEEEEEEEES---------SCCSSCCEE-EEEEEESSSSST---TTCCEEE---EC-CCTTCCE
T ss_pred ecccEEEeeccEEccCceEEEEEccC---------CCCCcEeeE-EEEEEECCCCCC---CCccEEE---Ee-cCCCcCE
Confidence 33445556678889999999999943 457899999 999998865210 0124311 12 2445789
Q ss_pred EEeeccccceeEEEEEeccccccccccCC
Q psy15127 605 YTVTHLRKFTKYEFFLVPFFKTVEGARLD 633 (633)
Q Consensus 605 ~~i~~L~~~t~Y~~~v~a~n~~g~g~~s~ 633 (633)
++|.+|+|++.|.|+|+|+|..|+|++|+
T Consensus 77 ~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~ 105 (120)
T 1ujt_A 77 AVLVNLKKGVTYEIKVRPYFNEFQGMDSE 105 (120)
T ss_dssp EEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCC
Confidence 99999999999999999999999999985
No 488
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.30 E-value=2.1e-12 Score=123.31 Aligned_cols=121 Identities=20% Similarity=0.299 Sum_probs=76.1
Q ss_pred eCCCceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC-----------------CCCCeEEccc-----ceEEEcc
Q psy15127 76 SEPSDATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM-----------------PTGRAKILDD-----RSLQIEN 129 (633)
Q Consensus 76 ~~~~~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~~-----~~L~i~~ 129 (633)
..+..+.+.+|++++|.|.+.+.. ...+.|+|.. ... ..+|+....+ ..|+|.+
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (263)
T 3iu4_H 5 KESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNS 84 (263)
T ss_dssp EEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECS
T ss_pred ECCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECC
Confidence 344568899999999999997532 4579999843 111 0234443322 3599999
Q ss_pred CCCCCCeEEEEEEEeCCc--------eEEEEEEEEEEee---ccccccCCCceEEecCCcEEEEEeCCCCCCC-CeEEE
Q psy15127 130 VGPQDEGLYICDVENLVG--------SISLRASLTVHLL---RDDFRAEPKDTRVASGETALLECGPPKGQPE-PTLHW 196 (633)
Q Consensus 130 v~~~d~G~Y~C~~~n~~g--------~~s~~~~l~V~~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~i~W 196 (633)
++.+|+|.|.|.+.+..+ .....+.|.|... +|.+...+....+..|+.++|.|.+....|. +.+.|
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 85 LQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp CCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred CCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 999999999999987531 1123346777531 2333322222334589999999996555664 68999
No 489
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=100.50 Aligned_cols=85 Identities=21% Similarity=0.372 Sum_probs=72.0
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEcccc---eEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDDR---SLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+....+.+|+++.|.|.+.+. |.++|+|++..+..+ +..+..++ .|.|.+++.+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE---
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe---
Confidence 45688888899999999999999999764 789999999988754 44444444 7999999999999999999
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
+..+..+.|.|..+
T Consensus 93 -~~~~~~~~l~V~~~ 106 (113)
T 2edh_A 93 -GKERTSAMLTVRAM 106 (113)
T ss_dssp -TTEEEEEEEEECCC
T ss_pred -CCCCEEEEEEEeCC
Confidence 66788899999887
No 490
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.30 E-value=7.5e-12 Score=117.17 Aligned_cols=180 Identities=18% Similarity=0.219 Sum_probs=88.2
Q ss_pred eEEEEEEEeCCceEEEEEEEEEEeeccccccCCCceE-EecCCcEEEEEeCCCCC--C-CCeEEEEECCEEeccCCCeeE
Q psy15127 136 GLYICDVENLVGSISLRASLTVHLLRDDFRAEPKDTR-VASGETALLECGPPKGQ--P-EPTLHWKKNGQFIDLESSKSL 211 (633)
Q Consensus 136 G~Y~C~~~n~~g~~s~~~~l~V~~~~p~~~~~~~~~~-~~~g~~~~l~C~~~~~~--p-~~~i~W~~~~~~~~~~~~~~~ 211 (633)
|.|.|.+.+..+. ......+..| ..+...|.... +..|+.+.|.|.+.... | ..+|.|+++|..+........
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~~~P-~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELLGGP-SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp ------------------------C-EEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC--CCccccCCCC-EEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 7899999887654 2222111222 33344555555 56799999999965545 4 348999999998854211111
Q ss_pred -Eeccce------eeeEE----EeeeEEEEeecCCCCCCcc-c------ccccceeEEec------CCceEEEEEEEeee
Q psy15127 212 -DLSRRT------LGWLR----VRPLYWNVARPRANLNPRY-I------GRKMASLLIWN------HPRVNRLSCFAEGS 267 (633)
Q Consensus 212 -~~~~~~------~~~~~----~~g~y~C~a~~~~~~~p~~-~------~~~~~~~~~~~------~g~~~~l~C~~~g~ 267 (633)
...+.. +.+.. ..+.|+|.+.+.....+.. . ....+...+.. .|+.++|.|.+.|.
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf 157 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGF 157 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEE
Confidence 011111 11111 1368999999987632211 0 11111222211 26889999999995
Q ss_pred -cCC-eeEEEECCEEEEeccCCccceEEEccCc------eEEEcCCCCCCCeEEEEEEEeCC
Q psy15127 268 -PLP-SVFWTQEGSQVLMFPGNAYGHLHVTQEG------TLRIQGVQKEDAGFFVCSALSVA 321 (633)
Q Consensus 268 -p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~~------~l~i~~~~~~d~G~Y~C~a~n~~ 321 (633)
|.+ .+.|+++|..+... .........++ .|.|.....+|.|.|+|.|.+..
T Consensus 158 ~P~~i~v~W~k~g~~~~~~---~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 158 YPSDIAVEWESNGQPENNY---KATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp BSSCCEEEEEETTEECSSE---EECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred eCCCcEEEEEECCEECCCc---CccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 443 89999999875311 11111112222 45666555567899999998864
No 491
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=4.8e-12 Score=101.64 Aligned_cols=86 Identities=24% Similarity=0.337 Sum_probs=72.2
Q ss_pred cCCeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEeC
Q psy15127 70 IKPFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVENL 145 (633)
Q Consensus 70 ~~p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~ 145 (633)
.+|.|...+.+..+.+|+.++|.|.+.+ |.+.+.|+|++..+..+ +..+..+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 4678888999999999999999999987 78899999999988654 4433333 3699999999999999999988
Q ss_pred CceEEEEEEEEEEee
Q psy15127 146 VGSISLRASLTVHLL 160 (633)
Q Consensus 146 ~g~~s~~~~l~V~~~ 160 (633)
.+..+.|.|..+
T Consensus 85 ---~~~~~~l~V~~~ 96 (103)
T 2edf_A 85 ---SKSTASLHVEEK 96 (103)
T ss_dssp ---CEEEEEEEECCC
T ss_pred ---CCcEEEEEEeCC
Confidence 367788888876
No 492
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.30 E-value=4.3e-12 Score=120.34 Aligned_cols=111 Identities=14% Similarity=0.229 Sum_probs=75.8
Q ss_pred CceEEEcCCCC--CCeEEEEEEe------------cCcCCeeeeCCCceEEEcCCeEEEEEEEec-cCCC-eEEEEeCCc
Q psy15127 47 GSVLGARGALS--DDQWKLIAKE------------ALIKPFPISEPSDATVLSGSVVEFVCRVGG-DPLP-TILWRRDDG 110 (633)
Q Consensus 47 ~~~L~i~~v~~--~G~Y~C~a~~------------v~~~p~~~~~~~~~~~~~G~~~~L~C~~~~-~p~p-~i~W~~~~~ 110 (633)
+.+|.|.+++. +|.|+|.+.+ |..+|.+...+.. .+..|+.+.|.|.+.+ .|.+ .|+|+|++.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 34599999998 9999999988 5567777665553 3556788889999998 7888 999999997
Q ss_pred cCCCCC----------------eEEcccceEEEccCCCCCCeEEEEEEEeCCce--EEEEEEEEEE
Q psy15127 111 KMPTGR----------------AKILDDRSLQIENVGPQDEGLYICDVENLVGS--ISLRASLTVH 158 (633)
Q Consensus 111 ~i~~~~----------------~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~--~s~~~~l~V~ 158 (633)
.+.... ........|.|.....+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 160 KFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp SSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred cCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 654220 01111246889999999999999999998876 5666677773
No 493
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.30 E-value=1.1e-11 Score=101.22 Aligned_cols=89 Identities=27% Similarity=0.484 Sum_probs=73.2
Q ss_pred CcCCeeeeCCCceEEEcCCeEEEEEEEecc--CCCeEEEEeCCccCCCCCe----EEc-c-------cceEEEccCCCCC
Q psy15127 69 LIKPFPISEPSDATVLSGSVVEFVCRVGGD--PLPTILWRRDDGKMPTGRA----KIL-D-------DRSLQIENVGPQD 134 (633)
Q Consensus 69 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~--p~p~i~W~~~~~~i~~~~~----~~~-~-------~~~L~i~~v~~~d 134 (633)
..+|.+...|....+.+|+.++|.|.+.+. +.+.+.|+|++..+..... ... . .+.|.|.+++.+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 568899999999999999999999999854 4578999999998865431 111 1 3689999999999
Q ss_pred CeEEEEEEEeCCce-EEEEEEEEE
Q psy15127 135 EGLYICDVENLVGS-ISLRASLTV 157 (633)
Q Consensus 135 ~G~Y~C~~~n~~g~-~s~~~~l~V 157 (633)
+|.|+|.|.|..|. .+..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999988 457777766
No 494
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2.4e-11 Score=98.50 Aligned_cols=95 Identities=20% Similarity=0.294 Sum_probs=76.4
Q ss_pred CCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecC--CCCeEEEEEeeeeceEEEecCCCCCeEEEEE
Q psy15127 409 FPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDL--QTGWVVAAHRITSTSITVSDLKPDTSYMFIV 486 (633)
Q Consensus 409 ~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v 486 (633)
.|++|..+++...+.+++.|+|.+|... ++.|.+|.|+|+..+. ...|.. .....+.++|.+|.|++.|.|+|
T Consensus 7 ~P~~p~~l~~~~~~~~sv~l~W~~p~~~---~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V 81 (109)
T 2e7h_A 7 GPPAVSDIRVTRSSPSSLSLAWAVPRAP---SGAVLDYEVKYHEKGAEGPSSVRF--LKTSENRAELRGLKRGASYLVQV 81 (109)
T ss_dssp SSCCCCCCEEEEEETTEEEEECCCCCCS---SSCCCEEEEEEEETTCCSTTTSEE--EEESSSEEEEESCCTTSCEEEEE
T ss_pred CCCCCCccEEEecCCCEEEEEeCCCCCC---CCcEeEEEEEEEECCCCCCceeEE--EccCCCEEEECCCCCCCeEEEEE
Confidence 4677889999999999999999999733 5789999999998752 223433 23356789999999999999999
Q ss_pred EEEeccccCCCCCCCCceeecCC
Q psy15127 487 RAENSHGLGIPSPVSPITRTLGL 509 (633)
Q Consensus 487 ~a~n~~G~g~~s~~~~~~~t~~~ 509 (633)
+|.|..|.|++|... .++|...
T Consensus 82 ~A~n~~G~g~~S~~~-~~~T~~~ 103 (109)
T 2e7h_A 82 RARSEAGYGPFGQEH-HSQTQLD 103 (109)
T ss_dssp EEECSSCBCCCCSCE-ECCCCCC
T ss_pred EEEeCCccCCCCCCE-EEEcCCC
Confidence 999999999999876 4566543
No 495
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=3.9e-12 Score=104.44 Aligned_cols=92 Identities=20% Similarity=0.287 Sum_probs=74.6
Q ss_pred CeeeeCCCceEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCCC-eEEc----ccceEEEccCCCCCCeEEEEEEEeCC
Q psy15127 72 PFPISEPSDATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTGR-AKIL----DDRSLQIENVGPQDEGLYICDVENLV 146 (633)
Q Consensus 72 p~~~~~~~~~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~~-~~~~----~~~~L~i~~v~~~d~G~Y~C~~~n~~ 146 (633)
+.|...+.+..+.+|++++|.|.+.+.|.|.++|+|++..+..+. ..+. ....|.|.+++.+|+|.|+|.+
T Consensus 14 ~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~---- 89 (115)
T 2cr6_A 14 VHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA---- 89 (115)
T ss_dssp CEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----
T ss_pred CeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----
Confidence 478888899999999999999999999999999999999886543 2222 1247999999999999999994
Q ss_pred ceEEEEEEEEEEeeccccccCC
Q psy15127 147 GSISLRASLTVHLLRDDFRAEP 168 (633)
Q Consensus 147 g~~s~~~~l~V~~~~p~~~~~~ 168 (633)
|.....+.|.|..+ |.+...+
T Consensus 90 g~~~~~~~L~V~~~-p~~~~~~ 110 (115)
T 2cr6_A 90 GDQRASAALRVTEK-PSVFSRS 110 (115)
T ss_dssp TTEECCEEEEEECC-SSCCSSS
T ss_pred CCeeEEEEEEEECC-CceeccC
Confidence 66777789999987 5544333
No 496
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.30 E-value=1.3e-11 Score=98.47 Aligned_cols=86 Identities=20% Similarity=0.216 Sum_probs=71.3
Q ss_pred cCCeeeeCCCc-eEEEcCCeEEEEEEEeccCCCeEEEEeCCccCCCC-CeEEccc---ceEEEccCCCCCCeEEEEEEEe
Q psy15127 70 IKPFPISEPSD-ATVLSGSVVEFVCRVGGDPLPTILWRRDDGKMPTG-RAKILDD---RSLQIENVGPQDEGLYICDVEN 144 (633)
Q Consensus 70 ~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~p~p~i~W~~~~~~i~~~-~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n 144 (633)
.+|.|...+.+ ..+.+|+.++|.|.+. .|.+.+.|+|++..+..+ +..+..+ ..|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 46888888877 6788999999999998 788999999999988654 4333332 36999999999999999999
Q ss_pred CCceEEEEEEEEEEee
Q psy15127 145 LVGSISLRASLTVHLL 160 (633)
Q Consensus 145 ~~g~~s~~~~l~V~~~ 160 (633)
|..+..+.|.|..+
T Consensus 83 --g~~~~~~~l~V~~~ 96 (100)
T 2yuv_A 83 --GDEKCSTELFVRSG 96 (100)
T ss_dssp --TTEEEEEEEEECCS
T ss_pred --CCceEEEEEEEecC
Confidence 66778888999876
No 497
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=7e-11 Score=97.09 Aligned_cols=100 Identities=27% Similarity=0.396 Sum_probs=81.5
Q ss_pred CCCCCCCCcEEEEeeCCeEEEEeCCCCCCCCCCcceeEEEEEEEEecCCCCeEEEEEeeeeceEEEecCCCCCeEEEEEE
Q psy15127 408 LFPGPPAAPVILNTTRGSVTLGWGEPEPRGGGVAPVIGYTVEYFSSDLQTGWVVAAHRITSTSITVSDLKPDTSYMFIVR 487 (633)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~i~l~W~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~ 487 (633)
..|++|..+.+...+.+++.|+|.++... ++.+.+|.|+|+..+.. .|. ......+.++|.+|.|++.|.|+|+
T Consensus 16 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~---~~~i~~Y~v~~~~~~~~-~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~ 89 (116)
T 1x5g_A 16 QLPGPAPNLRAYAASPTSITVTWETPVSG---NGEIQNYKLYYMEKGTD-KEQ--DVDVSSHSYTINGLKKYTEYSFRVV 89 (116)
T ss_dssp SCCCCCSSCEEEEEETTEEEEECCCCSCC---SSCCSEEEEEEEETTCC-CCC--CEEECSSEEEECSCCTTCEEEEEEE
T ss_pred CCCcCCCccEEEecCCCEEEEEEeCCCCC---CCcccEEEEEEEECCCC-ccE--EEecCCceEEEcCCCCCCEEEEEEE
Confidence 35678889999999999999999999743 57899999999987543 332 2334578899999999999999999
Q ss_pred EEeccccCCCCCCCCceeecCCCCCCC
Q psy15127 488 AENSHGLGIPSPVSPITRTLGLNSLVP 514 (633)
Q Consensus 488 a~n~~G~g~~s~~~~~~~t~~~~p~~~ 514 (633)
|.|..|.|.+|... .++|....|.++
T Consensus 90 A~n~~G~g~~S~~~-~~~T~~~~P~p~ 115 (116)
T 1x5g_A 90 AYNKHGPGVSTPDV-AVRTLSDSGPSS 115 (116)
T ss_dssp EECSSCCCCBCCCC-CEECCCSSCCCC
T ss_pred EEcCCCcCCCCCCE-EEECCCCCCCCC
Confidence 99999999999877 578877766554
No 498
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.29 E-value=2.3e-12 Score=103.98 Aligned_cols=76 Identities=11% Similarity=0.003 Sum_probs=62.3
Q ss_pred cccceEEEEEEEecCCCcccccchhhhhcceeEEEEEEcCCCcccceeeeeeccceeEeecCCccceEEeeccccceeEE
Q psy15127 538 TASTAVRITWEVSWGSVPQHLLDEARARLGTKVVNLRELIPTASTAVRITWEKYNMATVMNAATTTSYTVTHLRKFTKYE 617 (633)
Q Consensus 538 ~~~~si~v~W~~p~~~~p~~~~~~~~~i~~y~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~ 617 (633)
.+.++++|+|.++ .+++.+|++| +|+|+..+... |.... ...+..++++|.+|+|++.|+
T Consensus 19 ~~~~sv~L~W~p~--------~dggsPI~~Y-~I~yr~~~~~~-------w~~~~----~~~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQ--------DDGGAPILEY-IVKYRSKDKED-------QWLEK----KVQGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCC--------CCSSSCCSEE-EEEEEESSCCS-------CCEEE----EEETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECC--------CCCCCcccEE-EEEEEeCCCCC-------cEEeE----EcCCCcCEEEEcCCCCCCEEE
Confidence 5799999999954 5688999999 99999985543 43221 123567889999999999999
Q ss_pred EEEeccccccccccCC
Q psy15127 618 FFLVPFFKTVEGARLD 633 (633)
Q Consensus 618 ~~v~a~n~~g~g~~s~ 633 (633)
|+|.|.|..|.|.||.
T Consensus 79 frV~A~N~~G~s~pS~ 94 (114)
T 2kbg_A 79 VQITAANRLGYSEPTV 94 (114)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred EEEEEEeCCcCcCCcC
Confidence 9999999999999873
No 499
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=118.30 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=75.3
Q ss_pred CceEEeeC---ceEEEcCCCC--CCeEEEEEEe---------------cCcCC--------------------eeeeCCC
Q psy15127 40 RRSRSIFG---SVLGARGALS--DDQWKLIAKE---------------ALIKP--------------------FPISEPS 79 (633)
Q Consensus 40 ~~~~~~~~---~~L~i~~v~~--~G~Y~C~a~~---------------v~~~p--------------------~~~~~~~ 79 (633)
.|+.+..+ .+|.|.+++. +|.|+|.+.+ |..++ ..+..+.
T Consensus 63 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T 3ux9_B 63 DRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG 142 (256)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC
T ss_pred CcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC
Confidence 46655443 2699999998 9999999986 22222 1233344
Q ss_pred ceEEEcCCeEEEEEEEeccC--CCeEEEEeCC--ccC------------------CCCCeEEcc-----cceEEEccCCC
Q psy15127 80 DATVLSGSVVEFVCRVGGDP--LPTILWRRDD--GKM------------------PTGRAKILD-----DRSLQIENVGP 132 (633)
Q Consensus 80 ~~~~~~G~~~~L~C~~~~~p--~p~i~W~~~~--~~i------------------~~~~~~~~~-----~~~L~i~~v~~ 132 (633)
...+.+|++++|.|.+.+.+ .+.+.|+|+. ..+ ..+++.... ..+|+|.+++.
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 222 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRA 222 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCCh
Confidence 55689999999999998766 6789999963 221 012333322 23599999999
Q ss_pred CCCeEEEEEEEeCC
Q psy15127 133 QDEGLYICDVENLV 146 (633)
Q Consensus 133 ~d~G~Y~C~~~n~~ 146 (633)
+|+|.|+|.|.|..
T Consensus 223 ~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 223 EDTAVYYCARYIDF 236 (256)
T ss_dssp GGCEEEEEEEEETT
T ss_pred hhCEEEEEEEEcCC
Confidence 99999999999863
No 500
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=1.4e-11 Score=100.95 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=71.6
Q ss_pred eeEEecCCceEEEEEEEeeecCCeeEEEECCEEEEeccCCccceEEEc---cCceEEEcCCCCCCCeEEEEEEEeCCcee
Q psy15127 248 SLLIWNHPRVNRLSCFAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGST 324 (633)
Q Consensus 248 ~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 324 (633)
....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+. ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 15 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 89 (114)
T 2cqv_A 15 EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQE-----SEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSR 89 (114)
T ss_dssp CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCC-----SSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEE
T ss_pred CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcC-----CCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcE
Confidence 445678899999999999999999999999987642 1233332 24579999999999999999999999999
Q ss_pred EEEEEEEEEecccCC
Q psy15127 325 TVRAFLQVREFCVLP 339 (633)
Q Consensus 325 ~~~~~l~v~~~~~~p 339 (633)
+..+.|.|.+.+..|
T Consensus 90 ~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 90 QAQVNLTVVDKPDPP 104 (114)
T ss_dssp ECCEEEEEECSCSCC
T ss_pred EEEEEEEEECCCCCC
Confidence 999999998765544
Done!