Query psy15128
Match_columns 292
No_of_seqs 227 out of 2183
Neff 12.0
Searched_HMMs 29240
Date Fri Aug 16 21:18:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 2.1E-41 7.3E-46 285.4 26.1 273 2-290 257-562 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 2.6E-40 9E-45 278.8 27.0 273 2-290 161-468 (570)
3 3laf_A Deleted in colorectal c 100.0 1.9E-39 6.6E-44 262.9 24.8 275 3-290 87-393 (403)
4 1e07_A Carcinoembryonic antige 100.0 2.1E-37 7.2E-42 265.0 28.1 255 2-291 346-633 (642)
5 3kld_A Contactin 4, axcam, BIG 100.0 1.2E-38 4.2E-43 256.3 19.2 268 5-290 70-375 (384)
6 1bih_A Hemolin; insect immunit 100.0 1.2E-37 4E-42 251.7 18.4 274 2-290 66-388 (395)
7 3p3y_A Neurofascin; IG domains 100.0 4.2E-37 1.4E-41 249.2 21.4 273 3-290 82-395 (404)
8 1e07_A Carcinoembryonic antige 100.0 5E-36 1.7E-40 256.5 29.1 255 2-290 168-454 (642)
9 2v5m_A Dscam; neurobiology SPL 100.0 5E-38 1.7E-42 253.3 15.5 271 2-291 63-382 (388)
10 1cs6_A Axonin-1; neural cell a 100.0 2.3E-37 7.8E-42 249.0 18.4 271 2-290 65-374 (382)
11 2rik_A Titin; I-SET IG fold, p 100.0 2.1E-35 7.2E-40 228.1 27.7 241 35-290 4-276 (284)
12 3qs7_E FL cytokine receptor; i 100.0 8.5E-37 2.9E-41 247.5 17.1 264 2-291 107-407 (423)
13 2ec8_A MAST/stem cell growth f 100.0 1.1E-36 3.6E-41 254.7 17.3 277 2-291 172-503 (524)
14 2rcj_C Light chain; immunoglob 100.0 1.7E-35 5.7E-40 247.5 24.5 283 2-289 74-411 (523)
15 3qs9_E FL cytokine receptor; i 100.0 5.9E-36 2E-40 248.6 21.2 274 4-291 197-503 (527)
16 3dmk_A DOWN syndrome cell adhe 100.0 2E-35 7E-40 259.1 24.5 273 2-290 393-705 (816)
17 2ec8_A MAST/stem cell growth f 100.0 3.2E-36 1.1E-40 251.9 18.1 275 2-290 84-403 (524)
18 3dmk_A DOWN syndrome cell adhe 100.0 4.3E-35 1.5E-39 257.1 24.6 260 2-288 310-606 (816)
19 1qz1_A Neural cell adhesion mo 100.0 5.4E-35 1.9E-39 226.6 22.0 238 36-290 2-282 (291)
20 3qs9_E FL cytokine receptor; i 100.0 2.1E-36 7.1E-41 251.3 14.9 262 1-290 106-406 (527)
21 2yd9_A Receptor-type tyrosine- 100.0 7.8E-35 2.7E-39 227.1 21.9 240 34-290 4-283 (304)
22 2wim_A N-CAM 2, NCAM2, neural 100.0 5.2E-34 1.8E-38 221.1 21.2 236 35-291 3-277 (291)
23 1qgc_4 Protein (immunoglobulin 100.0 5.4E-35 1.9E-39 239.3 14.7 277 2-289 79-430 (438)
24 1wio_A CD4, T-cell surface gly 100.0 4E-35 1.4E-39 234.2 12.9 237 2-286 71-352 (363)
25 2ocw_A Polymeric-immunoglobuli 100.0 4.3E-33 1.5E-37 236.0 24.3 272 2-289 189-536 (585)
26 2rcj_C Light chain; immunoglob 100.0 8.1E-33 2.8E-37 231.2 21.8 278 2-288 182-514 (523)
27 2ocw_A Polymeric-immunoglobuli 100.0 5.7E-32 1.9E-36 229.1 25.1 271 2-289 79-432 (585)
28 3laf_A Deleted in colorectal c 100.0 3.7E-31 1.3E-35 214.3 23.1 240 35-290 20-303 (403)
29 1igt_B IGG2A intact antibody - 100.0 2E-32 6.8E-37 224.4 15.5 282 2-287 83-434 (444)
30 1z7z_I Intercellular adhesion 100.0 3.9E-31 1.3E-35 217.1 23.1 249 2-286 54-351 (450)
31 2y25_A Myomesin; structural pr 100.0 6.5E-33 2.2E-37 217.4 12.0 237 36-290 7-307 (317)
32 1bih_A Hemolin; insect immunit 100.0 6.8E-32 2.3E-36 218.0 17.9 245 31-289 1-297 (395)
33 1z7z_I Intercellular adhesion 100.0 6.1E-31 2.1E-35 216.0 22.4 242 2-290 146-441 (450)
34 3o4o_C Interleukin-1 receptor 100.0 8.6E-33 2.9E-37 218.8 10.2 251 34-291 16-328 (339)
35 1hzh_H IGG, immunoglobulin hea 100.0 6.4E-32 2.2E-36 222.1 15.5 281 2-288 83-444 (457)
36 3ejj_X Macrophage colony-stimu 100.0 2.5E-31 8.7E-36 205.7 16.9 234 36-291 4-274 (289)
37 3p3y_A Neurofascin; IG domains 100.0 3.6E-31 1.2E-35 214.4 18.5 243 31-290 11-303 (404)
38 2o26_X MAST/stem cell growth f 100.0 2.2E-31 7.5E-36 206.2 15.5 228 35-290 11-280 (290)
39 3kld_A Contactin 4, axcam, BIG 100.0 2.1E-31 7.2E-36 214.2 15.0 234 37-290 6-286 (384)
40 3qs7_E FL cytokine receptor; i 100.0 2.9E-31 1E-35 215.1 15.9 266 7-284 4-312 (423)
41 1ry7_B FGFR-3, fibroblast grow 100.0 2.9E-32 9.9E-37 215.3 8.9 241 42-290 14-319 (334)
42 2wng_A Tyrosine-protein phosph 100.0 1E-29 3.5E-34 200.2 23.3 244 38-288 5-309 (327)
43 1igy_B IGG1 intact antibody MA 100.0 3.1E-32 1.1E-36 222.5 9.0 282 2-288 82-425 (434)
44 3rjd_A High affinity immunoglo 100.0 2.2E-30 7.6E-35 197.6 17.9 212 36-289 1-250 (262)
45 2y23_A Myomesin; structural pr 100.0 9.3E-31 3.2E-35 204.7 16.1 230 45-291 10-305 (312)
46 1itb_B Type 1 interleukin-1 re 100.0 8.8E-32 3E-36 210.9 10.0 239 44-290 13-306 (315)
47 3v2a_R Vascular endothelial gr 100.0 7.5E-33 2.6E-37 241.6 4.2 273 2-288 294-651 (772)
48 2v5m_A Dscam; neurobiology SPL 100.0 2.8E-30 9.7E-35 208.1 17.8 236 36-290 3-298 (388)
49 3oq3_B IFN-alpha/beta binding 100.0 2.2E-30 7.4E-35 204.1 15.4 231 44-291 37-323 (329)
50 3v2a_R Vascular endothelial gr 100.0 7.1E-31 2.4E-35 229.2 13.5 227 2-237 187-462 (772)
51 1iga_A IGA1; immunoglobulin; N 100.0 4E-29 1.4E-33 206.4 22.9 279 2-287 84-443 (475)
52 4dep_C Interleukin-1 receptor 100.0 2.5E-30 8.6E-35 205.4 13.5 243 43-290 14-325 (349)
53 1cs6_A Axonin-1; neural cell a 100.0 2.3E-29 8E-34 202.3 17.4 233 36-290 4-285 (382)
54 4fqp_A Poliovirus receptor; im 100.0 1.7E-29 5.9E-34 197.7 15.2 231 40-290 4-296 (313)
55 4dkd_C Macrophage colony-stimu 100.0 7.2E-30 2.5E-34 197.8 11.4 234 35-291 3-274 (292)
56 4fom_A Poliovirus receptor-rel 100.0 6.1E-30 2.1E-34 199.8 10.9 231 44-290 7-292 (308)
57 2rik_A Titin; I-SET IG fold, p 100.0 8.6E-28 2.9E-32 185.4 21.2 196 2-206 65-264 (284)
58 1wio_A CD4, T-cell surface gly 100.0 7.1E-29 2.4E-33 198.1 15.6 223 46-290 4-285 (363)
59 3u83_A Poliovirus receptor-rel 100.0 8.9E-28 3E-32 189.4 19.8 234 38-290 16-312 (331)
60 3vh8_G Killer cell immunoglobu 100.0 1.6E-28 5.5E-33 192.4 15.1 237 29-287 17-297 (316)
61 2wim_A N-CAM 2, NCAM2, neural 100.0 2E-27 6.9E-32 184.0 18.9 199 2-206 64-264 (291)
62 1qz1_A Neural cell adhesion mo 100.0 3.4E-27 1.1E-31 182.7 19.9 197 2-206 66-270 (291)
63 2oz4_A Intercellular adhesion 100.0 9.4E-28 3.2E-32 183.3 16.2 201 46-290 13-256 (265)
64 1zvo_C Myeloma immunoglobulin 100.0 4.6E-26 1.6E-30 189.4 25.3 283 2-288 84-493 (512)
65 3mjg_X Beta-type platelet-deri 100.0 1E-27 3.6E-32 185.4 13.1 234 42-291 6-271 (289)
66 1qgc_4 Protein (immunoglobulin 99.9 2.4E-27 8.1E-32 194.0 15.0 242 39-286 4-321 (438)
67 2yd9_A Receptor-type tyrosine- 99.9 4.4E-26 1.5E-30 177.6 20.1 174 2-180 67-249 (304)
68 2nzi_A Titin; IG-domain, FNIII 99.9 1.4E-26 4.8E-31 180.5 17.2 245 35-290 3-282 (305)
69 2jll_A NCAM2, neural cell adhe 99.9 1.7E-24 5.6E-29 174.4 25.6 236 37-289 2-279 (389)
70 3oq3_B IFN-alpha/beta binding 99.9 1.1E-25 3.8E-30 177.2 18.1 200 2-208 93-312 (329)
71 2yd1_A Tyrosine-protein phosph 99.9 9.9E-25 3.4E-29 161.0 21.8 179 35-290 5-191 (212)
72 2yd6_A PTPRD protein; hydrolas 99.9 3.2E-24 1.1E-28 158.2 24.1 186 35-291 5-196 (212)
73 1za6_B IGG heavy chain; immuno 99.9 7.8E-26 2.7E-30 179.1 15.2 241 43-288 7-331 (344)
74 2a38_A Titin; Z1Z2, structural 99.9 8.1E-25 2.8E-29 159.2 18.9 140 36-177 5-144 (194)
75 2j8h_A Titin, connectin; cardi 99.9 1E-24 3.5E-29 159.0 19.1 184 35-290 3-189 (197)
76 2wqr_A IG epsilon chain C regi 99.9 9.3E-27 3.2E-31 182.9 8.2 232 52-287 25-309 (323)
77 3u83_A Poliovirus receptor-rel 99.9 7.9E-25 2.7E-29 172.5 17.9 195 2-206 96-300 (331)
78 1itb_B Type 1 interleukin-1 re 99.9 5.4E-25 1.9E-29 172.3 16.7 201 2-208 66-296 (315)
79 3ejj_X Macrophage colony-stimu 99.9 2.7E-25 9.2E-30 171.9 14.4 198 2-205 55-260 (289)
80 4fqp_A Poliovirus receptor; im 99.9 7E-25 2.4E-29 171.5 16.2 199 2-207 83-285 (313)
81 1igt_B IGG2A intact antibody - 99.9 6.7E-25 2.3E-29 179.7 16.8 241 43-288 7-331 (444)
82 2y25_A Myomesin; structural pr 99.9 1.1E-26 3.7E-31 182.0 5.9 201 2-206 65-295 (317)
83 1hzh_H IGG, immunoglobulin hea 99.9 1.4E-24 4.7E-29 178.5 18.4 241 43-288 7-340 (457)
84 4dep_C Interleukin-1 receptor 99.9 2.8E-25 9.6E-30 176.4 13.8 204 2-212 83-319 (349)
85 4fa8_A Secreted protein BARF1; 99.9 2.3E-25 7.8E-30 162.3 11.9 125 45-174 2-144 (203)
86 1ry7_B FGFR-3, fibroblast grow 99.9 1.2E-25 4.1E-30 177.4 11.2 205 1-209 64-310 (334)
87 3o4o_C Interleukin-1 receptor 99.9 2.3E-25 8E-30 176.1 12.0 201 2-207 85-316 (339)
88 2o26_X MAST/stem cell growth f 99.9 1.3E-24 4.5E-29 168.1 15.1 194 2-206 61-268 (290)
89 1epf_A NCAM, protein (neural c 99.9 1.8E-23 6E-28 151.7 19.9 174 36-289 2-182 (191)
90 3lcy_A Titin; A-BAND, IG tande 99.9 1.5E-23 5.2E-28 152.7 19.6 179 35-290 6-188 (197)
91 2v5t_A NCAM2, N-CAM 2, neural 99.9 1E-23 3.5E-28 152.7 16.4 179 36-290 2-180 (189)
92 2c5d_C AXL oncogene, tyrosine- 99.9 2.6E-23 8.8E-28 151.3 18.4 137 36-178 2-149 (195)
93 2vr9_A Roundabout 1, ROBO; imm 99.9 1.1E-23 3.9E-28 155.8 16.6 187 35-291 8-199 (217)
94 1rhf_A Tyrosine-protein kinase 99.9 1E-23 3.4E-28 151.8 15.7 132 36-177 2-140 (182)
95 3ojm_B Fibroblast growth facto 99.9 7.4E-24 2.5E-28 158.3 15.1 127 44-172 27-154 (231)
96 1igy_B IGG1 intact antibody MA 99.9 3.2E-25 1.1E-29 181.1 7.5 242 42-288 5-321 (434)
97 2wv3_A Neuroplastin; igcam, me 99.9 8.3E-23 2.9E-27 148.0 19.1 123 36-172 3-128 (190)
98 2y23_A Myomesin; structural pr 99.9 3.3E-24 1.1E-28 167.6 12.1 195 2-207 62-293 (312)
99 3rjd_A High affinity immunoglo 99.9 5.4E-23 1.9E-27 156.6 18.4 181 2-205 52-238 (262)
100 2v9r_A Roundabout homolog 1; p 99.9 9E-23 3.1E-27 150.4 18.9 179 36-290 9-193 (212)
101 1iga_A IGA1; immunoglobulin; N 99.9 7.6E-23 2.6E-27 168.9 20.3 241 41-288 6-335 (475)
102 4fom_A Poliovirus receptor-rel 99.9 4.9E-24 1.7E-28 166.3 11.8 199 2-207 78-281 (308)
103 1f97_A Junction adhesion molec 99.9 7.4E-23 2.5E-27 150.8 17.2 185 38-288 3-195 (212)
104 2wng_A Tyrosine-protein phosph 99.9 2.3E-23 7.8E-28 163.9 15.1 200 2-204 78-297 (327)
105 1nbq_A JAM, junctional adhesio 99.9 5.2E-23 1.8E-27 151.3 16.1 188 36-289 4-198 (209)
106 3k0w_A Mucosa-associated lymph 99.9 1.5E-22 5.2E-27 149.8 18.4 164 36-289 18-192 (218)
107 4dkd_C Macrophage colony-stimu 99.9 1E-23 3.5E-28 163.2 12.0 197 2-206 55-261 (292)
108 3vh8_G Killer cell immunoglobu 99.9 3.2E-23 1.1E-27 162.3 14.6 195 2-205 78-287 (316)
109 2va4_A NCAM2, N-CAM 2, neural 99.9 2.7E-22 9.2E-27 145.5 18.0 127 36-173 2-131 (192)
110 2c1o_A IGK-C protein; FAB frag 99.9 1.5E-23 5E-28 159.1 11.1 193 5-203 11-232 (254)
111 3grw_A Fibroblast growth facto 99.9 5.9E-22 2E-26 149.0 19.2 135 43-178 22-160 (241)
112 2ifg_A High affinity nerve gro 99.9 1.2E-24 4E-29 172.5 3.4 202 9-291 136-338 (347)
113 1fnl_A Low affinity immunoglob 99.9 1.2E-21 4E-26 140.0 17.6 157 35-288 6-163 (175)
114 3r4d_A CEA-related cell adhesi 99.9 3.4E-21 1.2E-25 141.5 20.1 172 42-290 5-191 (208)
115 2iep_A Muscle-specific kinase 99.9 8.4E-22 2.9E-26 142.9 15.8 161 35-205 6-168 (192)
116 1hng_A CD2; T lymphocyte adhes 99.9 1.2E-21 3.9E-26 139.9 15.4 154 46-290 6-168 (176)
117 3sgj_C Human FCG3A receptor; r 99.9 2.5E-21 8.5E-26 141.5 17.4 154 36-286 7-161 (204)
118 2v44_A NCAM2, neural cell adhe 99.9 5E-21 1.7E-25 138.4 17.2 157 39-206 5-167 (189)
119 3rbs_A Myomesin-1; immunoglobu 99.9 2E-22 6.8E-27 147.5 9.1 136 145-290 11-199 (207)
120 1f2q_A High affinity immunoglo 99.9 1.7E-21 5.7E-26 139.3 13.4 124 34-177 2-127 (176)
121 2r15_A Myomesin-1; sarcomeric 99.9 2E-21 6.9E-26 143.2 13.8 186 49-290 15-202 (212)
122 1za6_B IGG heavy chain; immuno 99.9 1.1E-21 3.6E-26 155.4 12.8 192 2-195 83-304 (344)
123 3mjg_X Beta-type platelet-deri 99.9 2.7E-21 9.4E-26 149.3 14.4 190 2-206 55-258 (289)
124 3s97_C Contactin-1; carbonic a 99.9 1.2E-21 4.3E-26 143.0 11.8 177 42-290 14-193 (201)
125 3jz7_A MCAR, CAR, coxsackievir 99.9 1.6E-21 5.5E-26 143.8 12.3 171 44-290 8-204 (214)
126 2iep_A Muscle-specific kinase 99.9 7.5E-22 2.6E-26 143.2 10.3 143 136-289 7-180 (192)
127 1zvo_C Myeloma immunoglobulin 99.9 2.2E-20 7.5E-25 155.3 20.4 243 42-288 6-387 (512)
128 2fbo_J V1V2;, variable region- 99.9 8.4E-21 2.9E-25 143.5 16.2 135 43-179 9-179 (250)
129 3mj8_L Stimulatory hamster ant 99.9 6E-21 2.1E-25 140.7 14.1 138 40-179 5-159 (213)
130 1uct_A Immunoglobulin alpha FC 99.9 4.6E-21 1.6E-25 141.5 13.3 163 35-205 8-172 (218)
131 2jll_A NCAM2, neural cell adhe 99.9 2.7E-19 9.1E-24 144.0 24.6 167 2-175 67-239 (389)
132 3bp6_B Programmed cell death 1 99.9 1.7E-20 5.8E-25 137.1 15.1 83 43-129 9-102 (202)
133 2oz4_A Intercellular adhesion 99.9 1.9E-21 6.6E-26 148.3 10.3 151 5-175 66-224 (265)
134 2d3v_A Leukocyte immunoglobuli 99.9 1.3E-21 4.3E-26 142.4 8.8 162 35-205 4-171 (196)
135 1jbj_A CD3 epsilon and gamma e 99.9 1.7E-21 5.8E-26 140.4 9.1 169 47-288 10-179 (186)
136 1vca_A VCAM-D1,2, human vascul 99.9 2.4E-20 8.2E-25 136.1 15.1 118 48-176 13-134 (202)
137 2v44_A NCAM2, neural cell adhe 99.9 6.8E-21 2.3E-25 137.8 11.9 140 139-289 5-178 (189)
138 3rbs_A Myomesin-1; immunoglobu 99.9 5.3E-21 1.8E-25 140.0 11.1 161 45-212 11-193 (207)
139 3b5h_A Cervical EMMPRIN, HAB18 99.8 7.8E-20 2.7E-24 131.6 16.4 160 46-290 8-175 (184)
140 2gi7_A GPVI protein; IG-like d 99.8 1.4E-20 4.7E-25 135.5 11.9 151 35-205 7-159 (184)
141 1oll_A NK receptor; immune sys 99.8 2.5E-20 8.4E-25 134.6 13.2 159 36-205 4-164 (188)
142 2c1o_A IGK-C protein; FAB frag 99.8 4.9E-21 1.7E-25 145.1 9.9 177 101-288 11-245 (254)
143 2x1w_L Vascular endothelial gr 99.8 4E-20 1.4E-24 136.3 14.2 128 42-177 13-148 (213)
144 2pet_A Lutheran blood group gl 99.8 1.2E-19 4E-24 135.5 16.7 137 42-180 6-164 (231)
145 2ny1_B T-cell surface glycopro 99.8 2.2E-20 7.4E-25 134.5 12.1 153 45-290 4-171 (184)
146 4f80_A Butyrophilin subfamily 99.8 8.7E-20 3E-24 135.8 15.5 77 45-121 13-110 (226)
147 4fa8_A Secreted protein BARF1; 99.8 3.9E-21 1.3E-25 139.9 7.7 119 1-121 72-193 (203)
148 2wqr_A IG epsilon chain C regi 99.8 4.7E-22 1.6E-26 156.1 2.8 199 4-205 78-299 (323)
149 2wv3_A Neuroplastin; igcam, me 99.8 2.5E-19 8.5E-24 129.6 16.3 124 2-129 60-189 (190)
150 1ugn_A LIR1, leukocyte immunog 99.8 1.1E-20 3.8E-25 137.7 9.2 162 35-205 4-172 (198)
151 3p2t_A Leukocyte immunoglobuli 99.8 1E-20 3.5E-25 137.7 8.9 161 36-205 5-170 (196)
152 2nzi_A Titin; IG-domain, FNIII 99.8 1.1E-19 3.6E-24 141.5 15.2 126 2-130 66-197 (305)
153 3nl4_L Antigen binding fragmen 99.8 5.1E-20 1.8E-24 135.7 12.5 167 38-206 3-194 (213)
154 3s96_B 3B5H10 FAB light chain; 99.8 1.1E-19 3.7E-24 134.5 13.9 139 38-178 3-165 (218)
155 4frw_A Poliovirus receptor-rel 99.8 2.9E-19 9.9E-24 132.0 15.6 130 42-175 5-157 (218)
156 3ry4_A Low affinity immunoglob 99.8 9.8E-20 3.4E-24 129.3 12.5 131 135-288 3-160 (170)
157 2p1y_A Bispecific alpha/beta T 99.8 1.2E-18 4E-23 130.7 19.0 135 39-174 3-165 (238)
158 1hnf_A CD2; T lymphocyte adhes 99.8 2.4E-19 8.1E-24 128.0 13.9 79 44-122 7-94 (182)
159 1nfd_E H57 FAB; complex (immun 99.8 3.8E-20 1.3E-24 136.3 10.0 134 43-177 6-156 (212)
160 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 7.5E-19 2.6E-23 133.2 17.2 134 39-173 6-173 (256)
161 3sbw_C Programmed cell death 1 99.8 6.2E-19 2.1E-23 130.7 16.0 174 43-290 8-203 (222)
162 3tv3_L PGT128 light chain, IG 99.8 5.1E-20 1.7E-24 135.5 9.7 131 45-178 9-155 (211)
163 1epf_A NCAM, protein (neural c 99.8 3.3E-19 1.1E-23 129.1 13.5 124 2-128 66-189 (191)
164 3mj6_A Junctional adhesion mol 99.8 2.1E-19 7.3E-24 137.2 12.6 129 37-173 6-158 (268)
165 1nkr_A P58-CL42 KIR; inhibitor 99.8 4.3E-19 1.5E-23 129.5 13.4 163 34-205 6-176 (201)
166 2a38_A Titin; Z1Z2, structural 99.8 5.7E-19 2E-23 128.1 13.8 121 2-128 67-193 (194)
167 2yd1_A Tyrosine-protein phosph 99.8 1.3E-18 4.6E-23 128.0 14.6 124 2-130 68-200 (212)
168 2c5d_C AXL oncogene, tyrosine- 99.8 1.4E-18 4.8E-23 126.2 14.2 118 2-128 72-191 (195)
169 2j8h_A Titin, connectin; cardi 99.8 6.7E-19 2.3E-23 128.1 12.2 125 2-129 66-196 (197)
170 1p6f_A NKP46, natural cytotoxi 99.8 1.1E-18 3.8E-23 130.6 13.5 163 35-208 6-170 (242)
171 3omz_A Human vdelta1 gamma del 99.8 4.3E-18 1.5E-22 129.2 16.7 138 37-174 3-175 (259)
172 3d9a_L Light chain of hyhel10 99.8 6.5E-19 2.2E-23 129.8 11.7 163 40-204 5-191 (213)
173 3pv7_A B7-H6, IG-like domain-c 99.8 1.3E-18 4.4E-23 131.3 13.5 131 43-179 10-163 (248)
174 2d3v_A Leukocyte immunoglobuli 99.8 1.6E-19 5.5E-24 131.3 8.2 144 135-287 4-181 (196)
175 3juy_B 3B3 single chain varian 99.8 5.6E-18 1.9E-22 128.4 16.9 138 36-173 6-187 (256)
176 3p2t_A Leukocyte immunoglobuli 99.8 8.3E-20 2.8E-24 132.8 6.2 142 135-286 4-179 (196)
177 1f3r_B FV antibody fragment; I 99.8 4.9E-18 1.7E-22 128.7 16.1 76 43-118 7-102 (257)
178 2v9r_A Roundabout homolog 1; p 99.8 2.5E-18 8.5E-23 126.5 14.0 123 2-129 76-201 (212)
179 3umt_A SCFV heavy chain and li 99.8 9.7E-18 3.3E-22 127.1 17.5 131 43-173 9-175 (256)
180 1qok_A MFE-23 recombinant anti 99.8 1.2E-17 4.1E-22 128.3 18.2 132 40-172 30-197 (282)
181 3uzq_A Anti-dengue MAB 4E11; d 99.8 4.4E-18 1.5E-22 128.7 15.5 134 41-174 6-175 (253)
182 3gkz_A Anti-methamphetamine si 99.8 4.9E-17 1.7E-21 123.3 21.2 133 41-173 13-179 (257)
183 1rhf_A Tyrosine-protein kinase 99.8 2.3E-18 7.9E-23 123.6 13.0 116 2-128 64-181 (182)
184 2yd6_A PTPRD protein; hydrolas 99.8 4.7E-18 1.6E-22 125.1 14.9 125 2-129 67-203 (212)
185 1ccz_A Protein (CD58); LFA-3, 99.8 5.6E-18 1.9E-22 120.0 14.6 82 45-129 4-93 (171)
186 2v5t_A NCAM2, N-CAM 2, neural 99.8 2.3E-18 7.8E-23 124.3 12.8 123 2-129 61-187 (189)
187 1lk3_L 9D7 light chain; antige 99.8 1.5E-18 5.2E-23 127.5 11.9 161 43-205 7-191 (210)
188 2dru_A Chimera of CD48 antigen 99.8 1E-17 3.6E-22 119.6 15.7 74 44-117 7-92 (180)
189 2r15_A Myomesin-1; sarcomeric 99.8 4.3E-18 1.5E-22 125.3 14.1 122 2-129 63-209 (212)
190 1b6u_A KIR2DL3, P58 killer cel 99.8 2.6E-18 8.8E-23 129.6 13.0 164 35-207 6-177 (257)
191 1dr9_A B7-1 (CD80), T lymphocy 99.8 5.9E-18 2E-22 123.5 14.3 165 45-223 3-185 (201)
192 2gi7_A GPVI protein; IG-like d 99.8 6.8E-19 2.3E-23 126.6 9.1 131 134-287 6-169 (184)
193 4fmk_A Poliovirus receptor-rel 99.8 4.6E-18 1.6E-22 126.1 13.9 125 45-174 10-160 (225)
194 2vr9_A Roundabout 1, ROBO; imm 99.8 4.9E-18 1.7E-22 125.4 13.6 125 2-126 73-202 (217)
195 3jz7_A MCAR, CAR, coxsackievir 99.8 5.1E-19 1.7E-23 130.4 8.0 123 2-129 88-211 (214)
196 2znx_A SCFV; fluorotryptohpan, 99.8 3.1E-17 1.1E-21 123.2 17.6 135 39-173 4-161 (242)
197 2va4_A NCAM2, N-CAM 2, neural 99.8 1.1E-17 3.6E-22 121.1 14.6 125 2-128 62-191 (192)
198 3ux9_B SCFV antibody; five hel 99.8 7.1E-18 2.4E-22 127.8 14.1 130 43-173 9-173 (256)
199 2x1w_L Vascular endothelial gr 99.8 2.3E-18 8E-23 126.8 10.7 129 2-130 68-207 (213)
200 2j6e_L IGM, FAB light chain; a 99.8 1.7E-18 5.8E-23 129.5 10.1 136 43-179 26-180 (234)
201 3k0w_A Mucosa-associated lymph 99.8 5.5E-18 1.9E-22 125.3 12.7 117 2-129 69-201 (218)
202 1uct_A Immunoglobulin alpha FC 99.8 1E-18 3.5E-23 128.9 8.4 138 134-285 7-180 (218)
203 3sgj_C Human FCG3A receptor; r 99.8 9E-18 3.1E-22 122.6 13.2 114 2-129 58-173 (204)
204 3ry4_A Low affinity immunoglob 99.8 2.9E-18 9.7E-23 121.7 10.0 143 37-205 5-149 (170)
205 1svz_A Immunoglobulin;, single 99.8 7.7E-17 2.6E-21 121.5 18.4 136 39-174 4-167 (247)
206 3lcy_A Titin; A-BAND, IG tande 99.8 1.2E-17 4E-22 121.4 13.2 125 2-129 67-195 (197)
207 1f97_A Junction adhesion molec 99.8 7.5E-18 2.5E-22 123.9 11.7 128 2-129 69-204 (212)
208 1q0x_L FAB 9B1, light chain; a 99.8 1.2E-17 4.2E-22 122.8 12.7 162 43-205 7-194 (212)
209 2ghw_B Anti-SARS SCFV antibody 99.8 7E-17 2.4E-21 121.7 17.0 162 44-205 10-220 (247)
210 3r06_A Anti-mouse CD3epsilon a 99.8 1.2E-17 3.9E-22 123.1 12.2 140 38-179 3-157 (213)
211 1sy6_A T-cell surface glycopro 99.8 3.4E-18 1.2E-22 124.8 9.2 122 148-288 15-193 (204)
212 3s97_C Contactin-1; carbonic a 99.8 2.6E-17 8.8E-22 120.0 13.8 122 2-129 70-200 (201)
213 3b5h_A Cervical EMMPRIN, HAB18 99.7 4E-17 1.4E-21 117.3 14.0 118 6-129 57-182 (184)
214 2if7_A SLAM family member 6; N 99.7 7.6E-17 2.6E-21 116.7 15.4 132 42-177 4-151 (193)
215 2gjj_A A21 single-chain antibo 99.7 1E-16 3.5E-21 121.9 16.3 138 37-174 6-178 (264)
216 3o3u_N Maltose-binding peripla 99.7 5.6E-17 1.9E-21 137.2 16.1 132 44-179 374-516 (581)
217 3qib_D 2B4 beta chain; IG doma 99.7 2E-17 7E-22 126.3 12.2 167 5-179 3-194 (270)
218 1vca_A VCAM-D1,2, human vascul 99.7 5.1E-17 1.7E-21 118.4 13.8 117 2-119 58-179 (202)
219 3sob_L Antibody light chain; b 99.7 2E-17 6.9E-22 123.8 12.0 141 37-179 25-180 (237)
220 1c1e_H Catalytic antibody 1E9 99.7 2.4E-16 8.4E-21 116.5 17.1 175 43-219 7-213 (219)
221 3auv_A SC-DSFV derived from th 99.7 7.3E-17 2.5E-21 123.6 14.5 169 37-205 13-228 (276)
222 3grw_A Fibroblast growth facto 99.7 5.4E-17 1.8E-21 121.8 13.3 128 2-130 76-218 (241)
223 3knb_A Titin; IG-like, titin, 99.7 2.2E-17 7.7E-22 105.7 9.6 94 36-129 5-98 (100)
224 1ugn_A LIR1, leukocyte immunog 99.7 7.1E-17 2.4E-21 117.4 13.5 115 2-118 62-181 (198)
225 2fbo_J V1V2;, variable region- 99.7 2.4E-17 8.3E-22 124.4 11.1 118 2-119 94-238 (250)
226 1fnl_A Low affinity immunoglob 99.7 7.3E-17 2.5E-21 115.0 13.0 113 2-128 58-172 (175)
227 2ny1_B T-cell surface glycopro 99.7 4.7E-17 1.6E-21 116.9 12.1 108 2-130 72-179 (184)
228 2gki_A Nuclease; anti-DNA anti 99.7 1.4E-16 5E-21 122.8 15.6 133 42-174 28-203 (291)
229 4i0k_A CD276 antigen; immunogl 99.7 6.4E-18 2.2E-22 125.3 7.7 141 145-290 4-198 (222)
230 3esu_F Antibody 14B7* light ch 99.7 6.7E-17 2.3E-21 122.0 13.4 168 38-205 6-225 (250)
231 2xzc_L FAB A.17 light chain; i 99.7 8.8E-17 3E-21 118.6 13.7 159 43-203 7-192 (216)
232 3bkj_L WO2 IGG2A FAB fragment 99.7 2.4E-17 8.2E-22 124.6 10.8 165 37-203 35-228 (252)
233 1moe_A Anti-CEA MAB T84.66; an 99.7 8E-17 2.7E-21 120.8 12.8 135 39-173 4-158 (240)
234 1nbq_A JAM, junctional adhesio 99.7 9.9E-18 3.4E-22 123.0 7.6 125 2-126 72-203 (209)
235 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 2.3E-16 8E-21 116.8 15.1 164 43-209 7-206 (222)
236 3sbw_C Programmed cell death 1 99.7 3.6E-17 1.2E-21 121.2 10.4 123 2-129 84-210 (222)
237 3bqu_C 3H6 FAB light chain; be 99.7 7.7E-18 2.6E-22 125.8 6.7 167 37-205 24-214 (233)
238 3mj8_L Stimulatory hamster ant 99.7 3.4E-17 1.2E-21 120.6 10.1 119 2-120 74-203 (213)
239 3ojm_B Fibroblast growth facto 99.7 1.1E-16 3.7E-21 119.3 12.9 128 2-130 80-221 (231)
240 1nqb_A Single-chain antibody f 99.7 1.5E-16 5.2E-21 120.4 13.8 158 42-204 6-210 (256)
241 1lk3_L 9D7 light chain; antige 99.7 4.8E-17 1.6E-21 119.5 10.6 122 2-123 74-205 (210)
242 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.3E-16 4.4E-21 120.2 13.0 141 39-179 4-170 (246)
243 3r4d_A CEA-related cell adhesi 99.7 1.6E-16 5.3E-21 116.5 12.9 112 2-121 75-190 (208)
244 3d9a_L Light chain of hyhel10 99.7 4.5E-17 1.6E-21 119.9 10.1 123 2-124 75-207 (213)
245 3knb_B Obscurin-like protein 1 99.7 1.5E-16 5.1E-21 103.1 11.3 93 35-129 12-104 (107)
246 4f80_A Butyrophilin subfamily 99.7 2.2E-17 7.5E-22 122.7 8.2 122 2-129 87-212 (226)
247 1mq8_A ICAM-1, intercellular a 99.7 7E-17 2.4E-21 123.2 11.1 186 41-241 4-233 (291)
248 1op3_H FAB 2G12, heavy chain; 99.7 5.7E-16 1.9E-20 115.0 15.8 169 43-214 7-213 (225)
249 2rgs_A I, IG gamma-2B heavy ch 99.7 6.2E-17 2.1E-21 119.5 10.4 142 36-178 9-161 (218)
250 1oll_A NK receptor; immune sys 99.7 1.1E-16 3.8E-21 115.4 11.5 108 2-117 61-172 (188)
251 4frw_A Poliovirus receptor-rel 99.7 1.3E-16 4.3E-21 117.7 12.1 128 2-130 83-211 (218)
252 2vol_A Murine IGG FC; FC, zinc 99.7 1E-16 3.4E-21 117.4 11.4 131 48-179 15-154 (207)
253 3mj6_A Junctional adhesion mol 99.7 8.7E-17 3E-21 122.7 11.4 143 2-153 88-256 (268)
254 2zg1_A Sialic acid-binding IG- 99.7 4.2E-16 1.4E-20 114.8 14.5 154 42-204 6-191 (214)
255 1sy6_A T-cell surface glycopro 99.7 2.4E-17 8.1E-22 120.4 7.7 138 49-205 16-182 (204)
256 1hng_A CD2; T lymphocyte adhes 99.7 4.9E-17 1.7E-21 115.8 8.9 108 1-126 64-172 (176)
257 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.7E-16 1.9E-20 114.2 15.0 90 36-129 19-111 (215)
258 1f2q_A High affinity immunoglo 99.7 7.9E-17 2.7E-21 114.9 9.9 114 2-129 55-170 (176)
259 3knb_A Titin; IG-like, titin, 99.7 2.4E-17 8.3E-22 105.5 6.3 80 205-290 12-91 (100)
260 4i0k_A CD276 antigen; immunogl 99.7 1.5E-16 5.2E-21 117.8 11.4 158 45-206 4-186 (222)
261 3bp6_B Programmed cell death 1 99.7 3.9E-17 1.3E-21 119.2 8.1 119 2-129 71-192 (202)
262 3nl4_L Antigen binding fragmen 99.7 1.5E-16 5.2E-21 117.0 11.3 113 2-114 75-198 (213)
263 3r06_A Anti-mouse CD3epsilon a 99.7 2.1E-16 7.2E-21 116.3 11.4 122 2-123 75-206 (213)
264 3d9a_H Heavy chain of hyhel10 99.7 7.8E-16 2.7E-20 113.0 14.4 162 43-207 7-195 (210)
265 2xzc_L FAB A.17 light chain; i 99.7 2.5E-16 8.5E-21 116.2 11.4 123 2-124 76-209 (216)
266 4acp_A IG gamma-1 chain C regi 99.7 1.4E-16 4.8E-21 118.8 9.8 180 11-195 1-192 (240)
267 1gsm_A Madcam-1, mucosal addre 99.7 1.4E-15 4.7E-20 109.9 14.4 118 46-179 17-142 (210)
268 1nkr_A P58-CL42 KIR; inhibitor 99.7 2.4E-17 8.3E-22 120.2 5.4 140 134-285 6-184 (201)
269 3tv3_L PGT128 light chain, IG 99.7 1.1E-16 3.7E-21 117.7 8.8 119 2-120 72-201 (211)
270 3nl4_H Antigen binding fragmen 99.7 9E-16 3.1E-20 113.1 13.6 152 42-194 5-180 (215)
271 2ifg_A High affinity nerve gro 99.7 8.9E-17 3E-21 127.2 8.2 120 2-129 216-344 (347)
272 1q0x_L FAB 9B1, light chain; a 99.7 3.4E-16 1.2E-20 115.1 10.8 118 2-119 77-204 (212)
273 3pv7_A B7-H6, IG-like domain-c 99.7 4.6E-16 1.6E-20 117.3 11.7 126 2-129 86-223 (248)
274 3sob_L Antibody light chain; b 99.7 4E-16 1.4E-20 116.7 11.0 124 2-125 98-231 (237)
275 3knb_B Obscurin-like protein 1 99.7 9E-17 3.1E-21 104.1 6.3 78 205-290 20-97 (107)
276 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.9E-15 6.4E-20 111.8 14.1 132 44-177 8-166 (220)
277 3q5y_A TCR N15 beta; IG, T cel 99.7 1.2E-15 4.2E-20 114.4 13.1 139 39-180 5-168 (240)
278 1mq8_A ICAM-1, intercellular a 99.7 1.2E-16 4.1E-21 121.9 7.5 165 3-179 55-234 (291)
279 1p6f_A NKP46, natural cytotoxi 99.7 5.3E-16 1.8E-20 116.1 10.8 108 2-117 64-175 (242)
280 1mju_H Immunoglobulin MS6-12; 99.7 2.5E-15 8.4E-20 111.6 14.2 135 42-177 6-164 (227)
281 2pet_A Lutheran blood group gl 99.7 6.7E-16 2.3E-20 115.0 11.1 113 2-116 81-211 (231)
282 1nqb_A Single-chain antibody f 99.7 6.8E-16 2.3E-20 116.8 11.3 115 2-116 83-218 (256)
283 4ei6_B Vbeta16 XV19 type II na 99.7 6.2E-16 2.1E-20 116.3 11.0 140 38-179 4-169 (245)
284 3m8o_H Immunoglobulin A1 heavy 99.7 2.1E-15 7.2E-20 111.6 13.3 132 43-177 7-167 (221)
285 3nfj_J T cell receptor beta ch 99.7 1.8E-15 6E-20 113.8 13.0 141 39-179 4-169 (245)
286 1jbj_A CD3 epsilon and gamma e 99.7 7.5E-17 2.6E-21 116.0 5.2 106 2-120 48-179 (186)
287 3s96_B 3B5H10 FAB light chain; 99.7 3.3E-16 1.1E-20 115.7 8.8 119 2-120 79-210 (218)
288 3eow_R Poliovirus receptor; im 99.7 1.2E-16 4.2E-21 118.3 6.5 124 2-127 82-209 (221)
289 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.7E-15 5.8E-20 110.4 12.4 115 2-124 69-195 (201)
290 2if7_A SLAM family member 6; N 99.7 1.4E-15 4.6E-20 110.1 11.8 106 1-122 73-184 (193)
291 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.7E-14 5.7E-19 106.8 17.9 135 44-179 8-172 (223)
292 1b6u_A KIR2DL3, P58 killer cel 99.7 1E-15 3.6E-20 115.4 11.4 162 2-174 66-240 (257)
293 3uzq_A Anti-dengue MAB 4E11; d 99.7 5.7E-16 2E-20 117.1 10.1 128 2-129 84-243 (253)
294 1i1c_A IGG2A, IG gamma-2A chai 99.7 9.5E-16 3.3E-20 114.6 11.0 147 48-195 29-185 (239)
295 2zg1_A Sialic acid-binding IG- 99.6 5.3E-16 1.8E-20 114.2 9.4 115 2-127 86-210 (214)
296 3pl6_D MBP peptide / T-cell re 99.6 1.9E-15 6.5E-20 115.2 12.7 142 37-179 27-191 (268)
297 1pz5_B Heavy chain of FAB (SYA 99.6 8.5E-15 2.9E-19 108.2 15.8 133 43-176 7-167 (220)
298 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 4.5E-16 1.5E-20 115.3 8.7 121 2-125 85-218 (222)
299 1pz5_B Heavy chain of FAB (SYA 99.6 1.7E-15 5.7E-20 112.1 11.1 120 2-123 85-214 (220)
300 3bqu_C 3H6 FAB light chain; be 99.6 1.9E-16 6.4E-21 118.3 6.0 119 1-119 96-224 (233)
301 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.2E-15 4.2E-20 116.3 10.5 170 36-205 15-247 (268)
302 3bkj_L WO2 IGG2A FAB fragment 99.6 8.9E-16 3E-20 116.0 9.6 119 2-120 113-241 (252)
303 1c1e_H Catalytic antibody 1E9 99.6 1.8E-15 6.2E-20 111.8 10.8 123 2-125 83-215 (219)
304 3bae_H WO2 IGG2A FAB fragment 99.6 5.6E-15 1.9E-19 109.8 13.5 134 43-177 7-173 (228)
305 1mju_H Immunoglobulin MS6-12; 99.6 1.4E-15 4.9E-20 112.9 10.2 124 2-126 83-213 (227)
306 2eo9_A Roundabout homolog 1; b 99.6 1.3E-15 4.3E-20 101.0 8.8 110 36-152 8-117 (118)
307 3eow_R Poliovirus receptor; im 99.6 2.5E-16 8.5E-21 116.6 5.9 155 43-204 6-190 (221)
308 2xqy_G A13-D6.3 monoclonal ant 99.6 1E-14 3.5E-19 110.4 14.9 177 42-220 12-219 (261)
309 3umt_A SCFV heavy chain and li 99.6 1.5E-15 5.3E-20 114.9 10.4 116 2-117 85-231 (256)
310 4fmk_A Poliovirus receptor-rel 99.6 3.3E-15 1.1E-19 110.6 12.0 128 2-129 87-216 (225)
311 2rgs_A I, IG gamma-2B heavy ch 99.6 4.2E-16 1.4E-20 115.1 6.8 150 136-288 9-206 (218)
312 1l6x_A Immunoglobulin gamma-1 99.6 2E-15 6.8E-20 110.5 10.3 129 49-178 16-153 (207)
313 2ghw_B Anti-SARS SCFV antibody 99.6 2E-15 6.9E-20 113.6 10.5 116 2-117 85-228 (247)
314 3d9a_H Heavy chain of hyhel10 99.6 2.2E-15 7.4E-20 110.6 10.4 119 2-123 82-207 (210)
315 3esu_F Antibody 14B7* light ch 99.6 2.9E-15 9.8E-20 113.0 11.2 114 2-115 78-231 (250)
316 1f3r_B FV antibody fragment; I 99.6 1.4E-15 4.8E-20 115.2 9.5 116 2-117 82-232 (257)
317 2vol_A Murine IGG FC; FC, zinc 99.6 3.1E-16 1E-20 114.8 5.4 146 140-288 6-198 (207)
318 3fku_X Neutralizing antibody F 99.6 9.7E-15 3.3E-19 112.0 13.7 163 43-206 7-227 (280)
319 2p1y_A Bispecific alpha/beta T 99.6 8.8E-15 3E-19 109.5 13.2 116 2-117 77-222 (238)
320 3qib_D 2B4 beta chain; IG doma 99.6 9E-17 3.1E-21 122.7 2.1 172 101-288 3-245 (270)
321 4dzb_B Vbeta2 (MAIT T cell rec 99.6 7.2E-16 2.5E-20 116.0 6.9 143 142-289 7-222 (246)
322 1c5d_H Monoclonal antibody aga 99.6 6.6E-14 2.3E-18 103.0 17.2 135 43-178 7-166 (215)
323 3liz_H 4C3 monoclonal antibody 99.6 3.4E-15 1.1E-19 112.8 10.2 125 2-128 83-218 (253)
324 1nfd_E H57 FAB; complex (immun 99.6 3.4E-16 1.2E-20 115.1 4.6 117 2-119 73-201 (212)
325 1moe_A Anti-CEA MAB T84.66; an 99.6 7.3E-15 2.5E-19 110.1 11.9 114 2-115 79-219 (240)
326 3to4_D NKT vbeta2 (mouse varia 99.6 5.8E-15 2E-19 111.6 11.4 138 42-179 7-169 (253)
327 2j6e_L IGM, FAB light chain; a 99.6 5.7E-16 2E-20 115.7 5.7 120 2-121 95-226 (234)
328 3qp3_A Titin; I-SET IG-like, s 99.6 4.7E-15 1.6E-19 95.8 9.3 93 35-129 7-99 (103)
329 2w59_A IGY FCU3-4; immunoglobu 99.6 5.7E-16 1.9E-20 115.3 5.6 137 41-180 18-164 (231)
330 3juy_B 3B3 single chain varian 99.6 3.7E-15 1.3E-19 112.8 10.1 115 2-116 89-242 (256)
331 1u2h_A APEG-1, aortic preferen 99.6 2.1E-14 7.3E-19 91.9 12.2 90 36-129 5-97 (99)
332 3auv_A SC-DSFV derived from th 99.6 9.4E-15 3.2E-19 111.8 12.2 115 2-116 86-235 (276)
333 2w59_A IGY FCU3-4; immunoglobu 99.6 1.1E-15 3.8E-20 113.8 6.8 147 139-288 16-218 (231)
334 2cqv_A MLCK, myosin light chai 99.6 2.1E-14 7.3E-19 94.4 12.2 91 35-130 6-99 (114)
335 2yr3_A Myosin light chain kina 99.6 4.3E-15 1.5E-19 95.2 8.6 91 33-128 8-98 (99)
336 3gkz_A Anti-methamphetamine si 99.6 6.5E-15 2.2E-19 111.5 11.1 115 2-116 90-234 (257)
337 2fbj_H IGA-kappa J539 FAB (hea 99.6 9.1E-15 3.1E-19 108.0 11.4 119 2-121 83-212 (220)
338 2kkq_A Myotilin; unknown funct 99.6 5.2E-15 1.8E-19 97.6 9.0 93 34-130 13-109 (116)
339 3ux9_B SCFV antibody; five hel 99.6 9.3E-15 3.2E-19 110.6 11.5 116 2-117 78-236 (256)
340 1g1c_A Immunoglobulin-like dom 99.6 1.9E-14 6.4E-19 92.1 11.2 92 36-129 5-97 (99)
341 2edj_A Roundabout homolog 2; K 99.6 1.1E-14 3.9E-19 93.3 10.2 91 35-129 7-97 (100)
342 3bn9_D E2 FAB heavy chain; ant 99.6 4.4E-15 1.5E-19 112.1 9.4 134 43-177 7-176 (257)
343 3kvq_A Vascular endothelial gr 99.6 4.4E-15 1.5E-19 96.8 8.3 98 29-130 3-100 (108)
344 2znx_A SCFV; fluorotryptohpan, 99.6 2.1E-14 7.3E-19 107.7 13.1 115 2-116 75-222 (242)
345 2kdg_A Myotilin; immonoglobuli 99.6 1.6E-14 5.6E-19 92.6 10.7 91 36-129 5-97 (100)
346 1dee_B IGM RF 2A2; FAB-IBP com 99.6 2.7E-14 9.2E-19 105.7 13.3 122 2-123 83-220 (223)
347 1bec_A 14.3.D T cell antigen r 99.6 2.3E-14 7.8E-19 107.2 13.0 139 41-180 4-167 (238)
348 3liz_H 4C3 monoclonal antibody 99.6 5.1E-14 1.7E-18 106.3 15.1 168 43-212 7-206 (253)
349 1wit_A Twitchin 18TH IGSF modu 99.6 6E-15 2.1E-19 93.3 8.3 89 36-128 2-92 (93)
350 1qok_A MFE-23 recombinant anti 99.6 1E-14 3.4E-19 112.0 11.2 114 2-116 109-253 (282)
351 3puc_A Titin; I-SET IG-like do 99.6 3.7E-14 1.3E-18 90.8 12.1 89 36-129 6-97 (99)
352 1hxm_B Gamma-delta T-cell rece 99.6 4.6E-14 1.6E-18 105.8 14.4 139 39-178 4-177 (242)
353 3bae_H WO2 IGG2A FAB fragment 99.6 1.1E-14 3.8E-19 108.2 10.9 121 2-124 84-220 (228)
354 3irg_A Titin; IG-like, titin, 99.6 1.2E-14 3.9E-19 93.3 9.6 91 36-129 5-98 (100)
355 2lu7_A Obscurin-like protein 1 99.6 4.2E-15 1.4E-19 91.5 6.9 74 206-288 4-77 (84)
356 3shs_A HOC head outer capsid p 99.6 1.3E-13 4.5E-18 100.8 15.7 227 39-282 5-278 (304)
357 2wbj_D OB TCR; transmembrane, 99.6 1.2E-14 4.2E-19 111.4 11.0 143 37-179 25-195 (279)
358 1svz_A Immunoglobulin;, single 99.6 4.5E-14 1.5E-18 106.2 14.0 115 2-116 80-228 (247)
359 1hnf_A CD2; T lymphocyte adhes 99.6 2.6E-14 8.7E-19 101.9 11.8 105 1-126 69-177 (182)
360 1op3_H FAB 2G12, heavy chain; 99.6 7.2E-15 2.5E-19 109.0 9.2 119 2-121 83-216 (225)
361 1gsm_A Madcam-1, mucosal addre 99.6 4.5E-14 1.5E-18 102.0 13.0 119 2-123 63-198 (210)
362 1he7_A High affinity nerve gro 99.6 6E-15 2.1E-19 97.0 7.6 79 212-291 14-92 (126)
363 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 3E-14 1E-18 107.8 12.6 116 2-118 80-234 (256)
364 2gki_A Nuclease; anti-DNA anti 99.6 1.7E-14 5.8E-19 111.2 10.9 115 2-116 105-257 (291)
365 3irg_B Obscurin-like protein 1 99.6 6.3E-14 2.2E-18 91.0 12.0 91 34-129 11-104 (107)
366 2dru_A Chimera of CD48 antigen 99.6 2.6E-14 8.7E-19 102.0 10.7 101 2-123 73-174 (180)
367 3cx2_A Myosin-binding protein 99.6 5.9E-14 2E-18 91.3 11.4 92 36-129 4-107 (108)
368 1l6x_A Immunoglobulin gamma-1 99.6 1.2E-14 4.2E-19 106.3 9.0 137 149-288 16-198 (207)
369 1dn0_B IGM-kappa cold agglutin 99.6 5.4E-14 1.8E-18 104.7 12.6 126 2-127 82-224 (232)
370 2gjj_A A21 single-chain antibo 99.6 8.5E-14 2.9E-18 105.7 13.7 115 2-116 85-239 (264)
371 2kdg_A Myotilin; immonoglobuli 99.6 1.4E-14 4.9E-19 92.9 8.0 79 205-290 12-90 (100)
372 3tv3_H PGT128 heavy chain, IG 99.6 2.2E-13 7.6E-18 101.9 15.7 134 43-177 7-183 (239)
373 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 4E-14 1.4E-18 107.9 11.8 115 2-116 94-254 (268)
374 2dm2_A Palladin; beta-sandwich 99.6 1.1E-14 3.9E-19 95.1 7.5 92 35-130 7-102 (110)
375 1dn0_B IGM-kappa cold agglutin 99.6 4E-13 1.4E-17 100.0 16.7 135 43-179 7-172 (232)
376 2lvc_A Obscurin-like protein 1 99.6 7.2E-15 2.5E-19 91.9 6.1 72 209-289 17-88 (91)
377 1fhg_A Telokin; immunoglobulin 99.5 4.6E-14 1.6E-18 98.0 10.7 97 29-130 34-134 (154)
378 4acp_A IG gamma-1 chain C regi 99.5 1.1E-15 3.7E-20 114.0 2.5 171 107-286 1-217 (240)
379 1g1c_A Immunoglobulin-like dom 99.5 1.3E-14 4.4E-19 92.9 7.1 79 205-290 12-90 (99)
380 1i1c_A IGG2A, IG gamma-2A chai 99.5 1.8E-15 6.1E-20 113.1 3.4 148 138-288 18-212 (239)
381 1ow0_A IG alpha-1 chain C regi 99.5 2.1E-15 7.1E-20 111.0 3.5 135 40-180 8-153 (214)
382 3m8o_H Immunoglobulin A1 heavy 99.5 6.9E-14 2.4E-18 103.4 11.6 116 2-119 85-212 (221)
383 2dav_A SLOW MYBP-C, myosin-bin 99.5 5.1E-14 1.8E-18 92.7 9.5 93 37-130 8-111 (126)
384 1wit_A Twitchin 18TH IGSF modu 99.5 1.5E-14 5.1E-19 91.4 6.5 76 205-290 9-86 (93)
385 1ccz_A Protein (CD58); LFA-3, 99.5 5.8E-14 2E-18 99.3 10.1 101 1-125 63-166 (171)
386 3qhz_H Human monoclonal antibo 99.5 2E-13 6.8E-18 101.7 13.6 133 44-177 8-175 (232)
387 4ei6_B Vbeta16 XV19 type II na 99.5 9.6E-15 3.3E-19 109.8 6.4 141 142-288 8-220 (245)
388 3qp3_A Titin; I-SET IG-like, s 99.5 2.2E-14 7.5E-19 92.5 7.3 77 206-290 16-92 (103)
389 3fku_X Neutralizing antibody F 99.5 3.3E-14 1.1E-18 109.0 9.4 115 2-117 83-234 (280)
390 2aty_A Complement receptor chi 99.5 2.5E-13 8.5E-18 108.5 14.8 131 48-179 180-319 (376)
391 3nl4_H Antigen binding fragmen 99.5 1.3E-14 4.3E-19 106.9 6.6 120 2-126 79-210 (215)
392 3omz_A Human vdelta1 gamma del 99.5 3.7E-14 1.3E-18 107.5 9.4 114 2-115 83-230 (259)
393 3u2s_H PG9 heavy chain; greek 99.5 2.9E-13 1E-17 101.7 14.0 135 42-177 5-184 (248)
394 2cqv_A MLCK, myosin light chai 99.5 3.2E-14 1.1E-18 93.6 7.7 78 205-290 14-91 (114)
395 3q5y_A TCR N15 beta; IG, T cel 99.5 4.2E-15 1.4E-19 111.4 3.7 145 142-289 8-215 (240)
396 2bk8_A Connectin, M1, titin he 99.5 4.2E-14 1.4E-18 90.1 7.9 79 204-290 7-86 (97)
397 2e7c_A Myosin-binding protein 99.5 1.3E-13 4.3E-18 91.3 10.4 92 35-129 20-114 (118)
398 1waa_A Titin; metal binding pr 99.5 3.6E-14 1.2E-18 89.3 7.3 76 205-289 12-87 (93)
399 1ypz_F T-cell receptor gamma c 99.5 2.3E-13 7.9E-18 101.1 13.0 139 40-179 5-176 (230)
400 2ckn_A Basic fibroblast growth 99.5 7E-14 2.4E-18 88.7 8.7 86 36-128 9-94 (95)
401 1nct_A Titin; cell adhesion, g 99.5 4E-14 1.4E-18 91.7 7.6 89 35-128 13-104 (106)
402 2xqy_G A13-D6.3 monoclonal ant 99.5 1E-13 3.4E-18 105.0 10.9 119 2-121 89-216 (261)
403 1c5d_H Monoclonal antibody aga 99.5 1E-13 3.5E-18 102.0 10.6 120 2-124 82-210 (215)
404 1gxe_A Myosin binding protein 99.5 1.9E-14 6.5E-19 97.4 6.1 80 204-290 24-131 (139)
405 3irg_A Titin; IG-like, titin, 99.5 2.4E-14 8.3E-19 91.8 6.3 80 205-290 12-91 (100)
406 1u2h_A APEG-1, aortic preferen 99.5 3.3E-14 1.1E-18 91.0 6.8 78 206-290 13-90 (99)
407 1oga_E TRBC1, T-cell receptor 99.5 2.6E-13 8.8E-18 102.4 12.9 140 39-179 6-168 (252)
408 2edj_A Roundabout homolog 2; K 99.5 4.5E-14 1.5E-18 90.5 7.3 75 206-290 16-90 (100)
409 1ypz_E T cell receptor delta, 99.5 3E-13 1E-17 98.8 12.5 149 39-197 4-179 (207)
410 2cry_A KIN of IRRE-like protei 99.5 2.8E-15 9.7E-20 99.9 1.4 100 29-129 7-112 (122)
411 2dm3_A KIAA0992 protein, palla 99.5 5.1E-14 1.7E-18 92.0 7.2 93 35-130 8-102 (110)
412 2bk8_A Connectin, M1, titin he 99.5 4.9E-13 1.7E-17 85.1 11.7 88 40-129 5-93 (97)
413 3pl6_D MBP peptide / T-cell re 99.5 5.1E-14 1.8E-18 107.3 8.3 118 2-119 104-241 (268)
414 2dm2_A Palladin; beta-sandwich 99.5 1.1E-13 3.8E-18 90.3 8.8 80 205-290 15-94 (110)
415 1hxm_B Gamma-delta T-cell rece 99.5 1.1E-13 3.6E-18 103.9 9.9 144 141-289 6-220 (242)
416 2eo9_A Roundabout homolog 1; b 99.5 8.4E-14 2.9E-18 92.2 8.2 76 205-290 15-90 (118)
417 3puc_A Titin; I-SET IG-like do 99.5 6.2E-14 2.1E-18 89.7 7.2 77 206-290 14-90 (99)
418 3bn9_D E2 FAB heavy chain; ant 99.5 4.2E-14 1.4E-18 106.7 7.3 121 2-123 83-223 (257)
419 1gxe_A Myosin binding protein 99.5 6.7E-14 2.3E-18 94.7 7.5 82 43-128 25-137 (139)
420 3caf_A Fibroblast growth facto 99.5 1.9E-13 6.5E-18 87.6 9.4 84 44-128 16-99 (100)
421 2yuz_A Myosin-binding protein 99.5 2.2E-13 7.6E-18 87.0 9.5 86 36-130 7-95 (100)
422 2ckn_A Basic fibroblast growth 99.5 4.6E-14 1.6E-18 89.5 6.2 73 205-290 16-88 (95)
423 2edn_A Myosin-binding protein 99.5 1.5E-13 5.3E-18 89.4 8.7 92 37-130 13-116 (118)
424 3qhz_H Human monoclonal antibo 99.5 1.2E-13 4.1E-18 102.9 9.4 125 2-127 87-226 (232)
425 2kkq_A Myotilin; unknown funct 99.5 1.2E-13 4.2E-18 90.9 8.2 81 204-290 21-101 (116)
426 2xot_A Amphoterin-induced prot 99.5 1.2E-13 4.1E-18 109.7 9.5 109 42-169 252-360 (361)
427 1waa_A Titin; metal binding pr 99.5 1.3E-12 4.5E-17 82.1 12.3 85 35-129 4-91 (93)
428 2yuz_A Myosin-binding protein 99.5 1.3E-13 4.5E-18 88.0 7.8 70 205-284 14-83 (100)
429 2dm3_A KIAA0992 protein, palla 99.5 4.1E-14 1.4E-18 92.5 5.4 80 205-291 16-95 (110)
430 2e7c_A Myosin-binding protein 99.5 8.9E-14 3E-18 92.0 7.1 77 205-290 31-107 (118)
431 3nfj_J T cell receptor beta ch 99.5 1.2E-13 4.2E-18 103.8 8.3 119 2-120 78-220 (245)
432 3kvq_A Vascular endothelial gr 99.5 9.3E-14 3.2E-18 90.4 6.6 77 204-290 16-92 (108)
433 1wwb_X Protein (brain derived 99.5 6.5E-14 2.2E-18 90.1 5.6 78 211-291 14-91 (103)
434 2lu7_A Obscurin-like protein 1 99.5 2.4E-13 8.1E-18 83.6 7.8 79 44-129 4-82 (84)
435 3bfo_A Mucosa-associated lymph 99.5 4.8E-13 1.7E-17 84.0 9.5 82 36-128 3-85 (91)
436 2yr3_A Myosin light chain kina 99.5 4.8E-14 1.6E-18 90.2 4.8 75 205-290 18-92 (99)
437 2v9t_A Roundabout homolog 1; s 99.5 1.6E-13 5.3E-18 90.7 7.4 83 205-291 16-101 (117)
438 1nct_A Titin; cell adhesion, g 99.5 1.9E-14 6.6E-19 93.2 2.9 78 205-290 21-98 (106)
439 3irg_B Obscurin-like protein 1 99.5 1.1E-13 3.6E-18 90.0 6.3 77 206-290 21-97 (107)
440 3bfo_A Mucosa-associated lymph 99.5 2.3E-13 7.8E-18 85.5 7.6 68 205-289 10-77 (91)
441 3tv3_H PGT128 heavy chain, IG 99.5 3E-13 1E-17 101.2 9.5 125 2-127 90-234 (239)
442 2aty_A Complement receptor chi 99.5 1.8E-13 6.1E-18 109.3 8.4 143 142-287 173-362 (376)
443 2v9t_A Roundabout homolog 1; s 99.4 5.3E-13 1.8E-17 88.1 9.2 96 34-129 7-108 (117)
444 3u2s_H PG9 heavy chain; greek 99.4 5E-13 1.7E-17 100.4 9.8 125 2-127 82-235 (248)
445 2cr3_A Basic fibroblast growth 99.4 1.4E-13 4.8E-18 87.9 5.7 73 205-290 10-82 (99)
446 3caf_A Fibroblast growth facto 99.4 8.8E-14 3E-18 89.2 4.8 77 206-290 16-93 (100)
447 3m45_A Cell adhesion molecule 99.4 1.3E-12 4.4E-17 84.9 10.4 95 34-129 4-105 (108)
448 3n9g_H FAB fragment of MAB CR4 99.4 2.8E-11 9.5E-16 89.9 19.0 132 44-178 8-170 (230)
449 2edh_A Obscurin; structural ge 99.4 2.1E-12 7.3E-17 84.6 11.5 90 29-129 11-104 (113)
450 2dlt_A Myosin binding protein 99.4 6.9E-13 2.3E-17 85.9 8.9 87 35-129 7-96 (106)
451 1wwb_X Protein (brain derived 99.4 8.7E-13 3E-17 84.8 9.2 79 49-129 14-97 (103)
452 4hwu_A Fibroblast growth facto 99.4 5.3E-13 1.8E-17 84.6 7.8 72 205-290 8-79 (95)
453 1gl4_B Basement membrane-speci 99.4 1.1E-12 3.6E-17 83.7 9.2 79 43-128 17-96 (98)
454 1x44_A Myosin-binding protein 99.4 8.8E-13 3E-17 84.9 8.8 85 38-130 9-96 (103)
455 3s35_X Vascular endothelial gr 99.4 7.3E-13 2.5E-17 88.2 8.6 86 45-130 17-110 (122)
456 1fhg_A Telokin; immunoglobulin 99.4 4E-13 1.4E-17 93.3 7.5 78 206-290 49-126 (154)
457 2ens_A Advanced glycosylation 99.4 2E-13 6.8E-18 86.7 5.4 83 36-129 10-92 (96)
458 2lvc_A Obscurin-like protein 1 99.4 7.7E-13 2.6E-17 82.6 8.0 66 47-115 17-82 (91)
459 2wbj_D OB TCR; transmembrane, 99.4 6.1E-13 2.1E-17 101.9 9.1 119 2-120 104-246 (279)
460 1bec_A 14.3.D T cell antigen r 99.4 4.8E-13 1.7E-17 100.0 8.3 118 2-119 76-212 (238)
461 3cx2_A Myosin-binding protein 99.4 4.3E-13 1.5E-17 87.1 6.7 86 204-290 10-100 (108)
462 2v5y_A Receptor-type tyrosine- 99.4 6.1E-12 2.1E-16 109.3 15.9 129 151-287 91-248 (731)
463 3f8u_B Tapasin; endoplasmic re 99.4 3.6E-11 1.2E-15 94.6 18.5 128 42-174 164-335 (401)
464 2edn_A Myosin-binding protein 99.4 1.5E-13 5.2E-18 89.4 4.3 86 204-290 18-108 (118)
465 3o3u_N Maltose-binding peripla 99.4 2.2E-12 7.7E-17 109.1 12.7 119 1-119 435-566 (581)
466 1wwc_A Protein (NT-3 growth fa 99.4 1.4E-12 4.9E-17 86.1 9.0 94 30-129 2-100 (118)
467 3so5_A LIG-3, leucine-rich rep 99.4 8E-13 2.7E-17 86.5 7.6 97 32-128 6-111 (112)
468 1oga_E TRBC1, T-cell receptor 99.4 1.1E-12 3.7E-17 99.0 9.3 120 2-121 80-220 (252)
469 2edf_A Obscurin; beta-sandwich 99.4 2.2E-12 7.5E-17 83.0 9.4 85 35-129 7-94 (103)
470 1he7_A High affinity nerve gro 99.4 1.1E-12 3.8E-17 86.2 7.8 78 50-129 14-98 (126)
471 2k1m_A Myosin-binding protein 99.4 4.4E-12 1.5E-16 80.2 10.3 86 37-129 9-94 (95)
472 2cr6_A KIAA1556 protein, obscu 99.4 6E-13 2E-17 87.5 6.4 96 29-130 5-102 (115)
473 3rbg_A Cytotoxic and regulator 99.4 2.1E-12 7.1E-17 86.1 9.0 88 42-130 7-101 (124)
474 3mlr_H Human monoclonal anti-H 99.4 8.1E-12 2.8E-16 92.5 13.0 131 44-177 8-170 (226)
475 2dav_A SLOW MYBP-C, myosin-bin 99.4 4.2E-13 1.4E-17 88.4 5.3 86 204-290 13-103 (126)
476 3n9g_H FAB fragment of MAB CR4 99.4 3.2E-12 1.1E-16 95.0 10.6 124 2-128 83-223 (230)
477 3to4_D NKT vbeta2 (mouse varia 99.4 8.6E-13 2.9E-17 99.6 7.6 118 2-119 78-219 (253)
478 2edk_A Myosin-binding protein 99.4 4.4E-13 1.5E-17 86.0 5.1 75 206-287 16-92 (101)
479 3r08_E T-cell surface glycopro 99.4 1.3E-12 4.4E-17 78.7 6.7 64 201-283 2-66 (82)
480 3qr2_A Basigin; CD147, EMMPRIN 99.4 2.9E-12 9.8E-17 87.1 9.4 88 33-120 18-116 (137)
481 2e6p_A Obscurin-like protein 1 99.4 2E-12 6.8E-17 83.4 8.2 87 36-129 7-96 (104)
482 2edk_A Myosin-binding protein 99.4 5.2E-13 1.8E-17 85.6 5.4 89 36-129 8-98 (101)
483 3sob_H Antibody heavy chain, l 99.4 1.5E-11 5.2E-16 92.9 14.1 131 44-177 31-195 (256)
484 1hxm_A Gamma-delta T-cell rece 99.4 5.9E-11 2E-15 87.8 16.9 149 39-196 4-179 (229)
485 3iu4_H CHP3 FAB heavy chain; a 99.4 3.1E-12 1.1E-16 96.9 10.3 130 45-177 9-168 (263)
486 1pd6_A Cardiac MYBP-C;, myosin 99.4 6.7E-12 2.3E-16 80.7 10.3 85 35-128 14-102 (104)
487 2eny_A Obscurin; beta-sandwich 99.4 2.7E-12 9.1E-17 82.6 8.4 89 36-130 8-97 (104)
488 1gl4_B Basement membrane-speci 99.4 1.1E-12 3.8E-17 83.6 6.4 73 206-290 18-90 (98)
489 2eny_A Obscurin; beta-sandwich 99.4 9.5E-13 3.2E-17 84.7 6.0 76 204-287 14-90 (104)
490 1wwc_A Protein (NT-3 growth fa 99.4 1E-12 3.6E-17 86.8 6.4 73 214-290 21-93 (118)
491 3shs_A HOC head outer capsid p 99.4 9.5E-12 3.2E-16 91.1 11.8 130 139-286 5-169 (304)
492 2dlt_A Myosin binding protein 99.4 1.5E-12 5.1E-17 84.3 6.8 72 205-285 15-86 (106)
493 1x44_A Myosin-binding protein 99.4 1.4E-12 4.9E-17 83.9 6.6 73 205-284 14-86 (103)
494 2cr3_A Basic fibroblast growth 99.4 1.7E-12 5.7E-17 82.9 6.9 80 43-129 10-89 (99)
495 2dku_A KIAA1556 protein; beta- 99.4 8.1E-12 2.8E-16 80.3 9.9 85 36-130 8-95 (103)
496 1ypz_F T-cell receptor gamma c 99.4 2.9E-12 9.7E-17 95.2 8.8 117 2-120 83-217 (230)
497 2cpc_A KIAA0657 protein; immun 99.4 9.9E-12 3.4E-16 81.4 10.5 87 33-129 7-99 (113)
498 2yuv_A Myosin-binding protein 99.3 1E-11 3.5E-16 79.3 9.9 84 36-129 7-94 (100)
499 2v5y_A Receptor-type tyrosine- 99.3 1E-10 3.4E-15 101.7 19.1 141 51-205 91-238 (731)
500 2cry_A KIN of IRRE-like protei 99.3 1.4E-13 4.8E-18 91.6 1.0 82 207-290 22-105 (122)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.1e-41 Score=285.44 Aligned_cols=273 Identities=23% Similarity=0.380 Sum_probs=216.3
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCC-ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQ-DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.|..|..... +.|.|..+|.+..... ...+.+|+.+.|.|.+.|.|.+.+.|++++..+...
T Consensus 257 i~~v~~~D~G~Y~C~a~N~~g~~~~~-~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~ 335 (570)
T 3b43_A 257 VLKVTKGDAGQYTCYASNVAGKDSCS-AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES 335 (570)
T ss_dssp ESSBCGGGCEEEEEEEEETTEEEEEE-EEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCS
T ss_pred EcccCcccCEEEEEEEECCCCcEEEE-EEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC
Confidence 67899999999999999998887666 8999999998776543 345788999999999999999999999999876321
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA 160 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 160 (292)
.............|.|.+++.+|+|.|+|.|.|..|.......|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 336 --~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-----~P~~~~~~~~~~~~~G~~v~l~C~~ 408 (570)
T 3b43_A 336 --SKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-----PPVFRKKPHPVETLKGADVHLECEL 408 (570)
T ss_dssp --SSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEEC-----CCEECSCCCCEEECTTCCEEEEEEE
T ss_pred --CcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecC-----CCeeecCCCceeecCCCEEEEEEEE
Confidence 111111122345799999999999999999999999888888877763 6666666777778899999999999
Q ss_pred ccCCCCceEEEeCCeeCCCCCccEEEcCC---CcEEEEeeecCCCCCC-----------------------------cce
Q psy15128 161 VGSPPPHIRWYKNGNSLPPEDTRINVSSS---GSLQIDVLRDDFRAEP-----------------------------KDT 208 (292)
Q Consensus 161 ~~~p~~~~~W~~~~~~l~~~~~~~~~~~~---~~l~i~~~~~~d~g~~-----------------------------~~~ 208 (292)
.+.|.|.+.|+|++.++.... ++.+..+ ..|.|.++..+|+|.| ...
T Consensus 409 ~g~P~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~ 487 (570)
T 3b43_A 409 QGTPPFQVSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDI 487 (570)
T ss_dssp ESSSSCCCEEEETTEECCSSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCB
T ss_pred ecCCCCEEEEEECCEECcCCC-CEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCc
Confidence 999999999999999987653 3333222 3688999999999922 344
Q ss_pred EEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 209 RVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 209 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+.+|+.+.|.|.+ .|.|++.+.|++++..+.. .+.++.+...+ ....|.|..+..+|+|.|+|.|+|.+|.+
T Consensus 488 ~~~~g~~~~l~c~~-~g~p~~~v~W~k~~~~~~~-~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 560 (570)
T 3b43_A 488 STVVGEEVQLQATI-EGAEPISVAWFKDKGEIVR-ESDNIWISYSE-----NIATLQFSRAEPANAGKYTCQIKNEAGTQ 560 (570)
T ss_dssp CCBTTCCEEEEEEE-ESCSSCCCEEEETTEECCC-CTTTEEECCCS-----SEEEEEESSCCTTCCEEEEEEEECSSCEE
T ss_pred eecCCCeEEEEEEE-ecCCCCEEEEEeCCeEecc-CCCeEEEEECC-----CEEEEEECcCCHHHCEEEEEEEEECCcEE
Confidence 56789999999998 8999999999999866532 23334332221 12368899999999999999999999998
Q ss_pred cc
Q psy15128 289 QH 290 (292)
Q Consensus 289 ~~ 290 (292)
+.
T Consensus 561 ~~ 562 (570)
T 3b43_A 561 EC 562 (570)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.6e-40 Score=278.80 Aligned_cols=273 Identities=24% Similarity=0.426 Sum_probs=210.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.|..|..... +.|.|. .+|.+...+....+.+|+.++|.|.+.|.|.+.+.|++++..+.
T Consensus 161 i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~ 239 (570)
T 3b43_A 161 ILQTDQSHVGQYNCSASNPLGTASSS-AKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR 239 (570)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECC
T ss_pred ECcCChHHCEEEEEEEEeCCcEEEEE-EEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECc
Confidence 66888999999999999988876655 677764 35677777778888999999999999999999999999998763
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeC-CCCceecCCCeEEEE
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVG-PSNQTLPLHSVAFLP 157 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~g~~v~l~ 157 (292)
.+.............|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|.+... .....+.+|+.+.|.
T Consensus 240 --~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-----~p~~~~~~~~~~~v~~g~~~~l~ 312 (570)
T 3b43_A 240 --PGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE-----PPRFIKKLEPSRIVKQDEHTRYE 312 (570)
T ss_dssp --TTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBC-----CCEEEECCCSBCCEESSCEEEEE
T ss_pred --CCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeec-----CCcccccCCCccEEcCCCcEEEE
Confidence 11111111122346899999999999999999999988777777666642 4444433 333457899999999
Q ss_pred eEeccCCCCceEEEeCCeeCCCCCcc-EEE-cCCCcEEEEeeecCCCC-----------------------------CCc
Q psy15128 158 CQAVGSPPPHIRWYKNGNSLPPEDTR-INV-SSSGSLQIDVLRDDFRA-----------------------------EPK 206 (292)
Q Consensus 158 C~~~~~p~~~~~W~~~~~~l~~~~~~-~~~-~~~~~l~i~~~~~~d~g-----------------------------~~~ 206 (292)
|.+.+.|.+.+.|+|++.++...... +.. ...+.|.|.++..+|+| .+.
T Consensus 313 C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~ 392 (570)
T 3b43_A 313 CKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH 392 (570)
T ss_dssp EEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCC
T ss_pred EEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCC
Confidence 99999999999999999998765321 211 22347999999999999 224
Q ss_pred ceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccc
Q psy15128 207 DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 207 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
...+.+|+.+.|.|.+ .|.|.+.+.|+++|.++.. +.++.+..++. ...|.|..+..+|+|.|+|.|.|..|
T Consensus 393 ~~~~~~G~~v~l~C~~-~g~P~p~v~W~k~g~~l~~--~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~A~N~~G 464 (570)
T 3b43_A 393 PVETLKGADVHLECEL-QGTPPFQVSWHKDKRELRS--GKKYKIMSENF-----LTSIHILNVDSADIGEYQCKASNDVG 464 (570)
T ss_dssp CEEECTTCCEEEEEEE-ESSSSCCCEEEETTEECCS--SSSEEEEEETT-----EEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ceeecCCCEEEEEEEE-ecCCCCEEEEEECCEECcC--CCCEEEEEcCC-----EEEEEECCCChhhCEEEEEEEEECCC
Confidence 5567889999999998 8999999999999999863 33333322221 22588999999999999999999999
Q ss_pred cccc
Q psy15128 287 QQQH 290 (292)
Q Consensus 287 ~~~~ 290 (292)
+++.
T Consensus 465 ~~~~ 468 (570)
T 3b43_A 465 SDTC 468 (570)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8753
No 3
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-39 Score=262.87 Aligned_cols=275 Identities=23% Similarity=0.376 Sum_probs=214.0
Q ss_pred ccCCcCCCeeEEEEEEecc-cccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 3 TEVKKSDEGKYQCYVQNMV-GERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 3 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
.+++.+|+|.|+|.+.+.. +......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 87 ~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~- 165 (403)
T 3laf_A 87 SRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPI- 165 (403)
T ss_dssp BTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCC-
T ss_pred cCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEecccc-
Confidence 3447889999999999653 44444458889988888887888889999999999999999899999999998765321
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEEEeecCCC-CCeEEeCCCCceecCCCeEEEEeE
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVTSVEDTP-PPIVQVGPSNQTLPLHSVAFLPCQ 159 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~-~~~~~~~~~~~~~~~g~~v~l~C~ 159 (292)
....+......+.|.|.+++.+|+|.|+|.+.+..+... ....+.+....... ++.+...+....+.+|+.+.|.|.
T Consensus 166 -~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~ 244 (403)
T 3laf_A 166 -PGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECC 244 (403)
T ss_dssp -TTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCE
T ss_pred -CCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEE
Confidence 122333444566899999999999999999998766532 34555554322111 123445566777889999999999
Q ss_pred eccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCC-----------------------------CcceEE
Q psy15128 160 AVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAE-----------------------------PKDTRV 210 (292)
Q Consensus 160 ~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~-----------------------------~~~~~~ 210 (292)
+.+.|.+.+.|++++..+............+.|.|.++..+|+|. +....+
T Consensus 245 ~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~ 324 (403)
T 3laf_A 245 VSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYA 324 (403)
T ss_dssp EEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEC
T ss_pred cCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEE
Confidence 999999999999999998876666666677789999999999992 345567
Q ss_pred eCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 211 ASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 211 ~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.+|+.+.|.|.+ .+.|.+.+.|+++|..+. ...+.....+ ..|.|..+..+|+|.|+|.|.|..|+++.
T Consensus 325 ~~g~~v~l~C~~-~g~p~p~v~W~~~g~~~~--~~~~~~~~~~--------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 393 (403)
T 3laf_A 325 YESMDIEFECAV-SGKPVPTVNWMKNGDVVI--PSDYFQIVGG--------SNLRILGVVKSDEGFYQCVAENEAGNAQS 393 (403)
T ss_dssp CTTCCEEECCEE-EEESCCEEEEEETTEECC--CSSSEEEETT--------TEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ecCCeEEEEEEE-eeccCCEEEEEECCEECC--CCCcEEEecC--------ccEEEeccccccCEEEEEEEEcCCceEEE
Confidence 789999999998 889999999999999885 3333333222 25889999999999999999999999865
No 4
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.1e-37 Score=264.98 Aligned_cols=255 Identities=19% Similarity=0.372 Sum_probs=203.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcE-EeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSF-VVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.|..|...+..+.|.|..+|.. ...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 346 i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~-- 423 (642)
T 1e07_A 346 LLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ-- 423 (642)
T ss_pred EeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcC--
Confidence 67899999999999999988876555588888876643 455666788899999999999999999999999987652
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA 160 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 160 (292)
....|.|.++..+|.|.|+|.+.|..|.......+.+.+.....+|.+.. .....+.+|+.+.|.|.+
T Consensus 424 -----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~ 491 (642)
T 1e07_A 424 -----------HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS-NNSKPVEDKDAVAFTCEP 491 (642)
T ss_pred -----------CCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec-CCceeecCCCeEEEEEEC
Confidence 13469999999999999999999988776655555554443333455443 344567899999999999
Q ss_pred ccCCCCceEEEeCCeeCCCCCccEEEc-CCCcEEEEeeecCCCCCC-------------------------------cce
Q psy15128 161 VGSPPPHIRWYKNGNSLPPEDTRINVS-SSGSLQIDVLRDDFRAEP-------------------------------KDT 208 (292)
Q Consensus 161 ~~~p~~~~~W~~~~~~l~~~~~~~~~~-~~~~l~i~~~~~~d~g~~-------------------------------~~~ 208 (292)
. .|.+.+.|+++|.++.... ++.+. .++.|.|.++..+|+|.| ...
T Consensus 492 ~-~~~~~i~W~~~g~~l~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~ 569 (642)
T 1e07_A 492 E-AQNTTYLWWVNGQSLPVSP-RLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDS 569 (642)
T ss_pred C-CCCcEEEEEECCEeCCCCC-cEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCce
Confidence 8 4788999999999987653 34333 356899999999999922 345
Q ss_pred EEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 209 RVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 209 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+.+|+.+.|.|.+ .|.|++.+.|+++|.++... ..|.|..+..+|+|.|+|.|.|.+|.+
T Consensus 570 ~v~~g~~~~l~C~~-~g~p~p~v~W~~~g~~i~~~------------------~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 630 (642)
T 1e07_A 570 SYLSGANLNLSCHS-ASNPSPQYSWRINGIPQQHT------------------QVLFIAKITPNNNGTYACFVSNLATGR 630 (642)
T ss_pred eEEcCCcEEEEEEe-ccCCCCeEEEEECCEECccC------------------ceEEECcccccCCeEEEEEEEecccCc
Confidence 67789999999998 89999999999999987421 157788899999999999999999998
Q ss_pred ccC
Q psy15128 289 QHG 291 (292)
Q Consensus 289 ~~~ 291 (292)
+.+
T Consensus 631 ~~s 633 (642)
T 1e07_A 631 NNS 633 (642)
T ss_pred cee
Confidence 653
No 5
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.2e-38 Score=256.29 Aligned_cols=268 Identities=23% Similarity=0.339 Sum_probs=195.5
Q ss_pred CCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeC-CCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeeccC
Q psy15128 5 VKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVR-PQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMFPG 82 (292)
Q Consensus 5 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~ 82 (292)
++.+|+|.|+|.|.|..|......+.|.+...+.+... .....+.+|+.+.|.|... +.|.+.+.|++++..+.
T Consensus 70 ~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~---- 145 (384)
T 3kld_A 70 NKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY---- 145 (384)
T ss_dssp CHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC----
T ss_pred CCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE----
Confidence 37789999999999998876655577777654443332 3446788999999999764 45678999999987653
Q ss_pred CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE---EEEEEEe--ec-CCCCCeEEeCCCCceecCCCeEEE
Q psy15128 83 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR---AFLQVTS--VE-DTPPPIVQVGPSNQTLPLHSVAFL 156 (292)
Q Consensus 83 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~---~~l~v~~--~~-~~~~~~~~~~~~~~~~~~g~~v~l 156 (292)
....+......+.|.|.+++.+|+|.|+|.+.|..+..... ..+.+.. .. ...+.+....+....+.+|+.+.|
T Consensus 146 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l 225 (384)
T 3kld_A 146 QDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKL 225 (384)
T ss_dssp CSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEE
T ss_pred eeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEE
Confidence 11112222335679999999999999999999987654321 1122211 10 111222233455566889999999
Q ss_pred EeEeccCCCCceEEEeC-CeeCCCCCccEEEcCCCcEEEEeeecCCCCC-----------------------------Cc
Q psy15128 157 PCQAVGSPPPHIRWYKN-GNSLPPEDTRINVSSSGSLQIDVLRDDFRAE-----------------------------PK 206 (292)
Q Consensus 157 ~C~~~~~p~~~~~W~~~-~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~-----------------------------~~ 206 (292)
.|.+.+.|.|.+.|+++ +..+.. ........+.|.|.++..+|+|. +.
T Consensus 226 ~C~~~g~P~p~i~W~k~~~~~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~ 303 (384)
T 3kld_A 226 ECFALGNPVPTILWRRADGKPIAR--KARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIIN 303 (384)
T ss_dssp EEEEEEESCCEEEEEETTCCCCCT--TCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCC
T ss_pred EEEEeecCCCcEEEEeCCCccccc--cceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCC
Confidence 99999999999999995 445543 22223346689999999999992 24
Q ss_pred ceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccc
Q psy15128 207 DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 207 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
...+..|+.+.|.|.+ .|.|.|.|.|+++|.++. ...++.+... .|.|..+..+|+|.|+|.|.|.+|
T Consensus 304 ~~~v~~g~~v~l~C~~-~g~P~p~i~W~k~g~~l~--~~~~~~~~~~---------~L~i~~v~~~D~G~Y~C~A~N~~G 371 (384)
T 3kld_A 304 DIHVAMEESVFWECKA-NGRPKPTYRWLKNGDPLL--TRDRIQIEQG---------TLNITIVNLSDAGMYQCVAENKHG 371 (384)
T ss_dssp CEEECTTCCEEEECEE-EEESCCEEEEEETTEECC--CBTTEEEETT---------EEEESSCCGGGCEEEEEEEEETTE
T ss_pred ceEecCCCCEEEEeEC-CccCCCeEEEEECCEECC--CCccEEEeCC---------EEEEeecChhhCEEEEEEEEeCCc
Confidence 5667899999999998 899999999999999985 3344444322 688999999999999999999999
Q ss_pred cccc
Q psy15128 287 QQQH 290 (292)
Q Consensus 287 ~~~~ 290 (292)
....
T Consensus 372 ~~~~ 375 (384)
T 3kld_A 372 VIFS 375 (384)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8764
No 6
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.2e-37 Score=251.74 Aligned_cols=274 Identities=18% Similarity=0.267 Sum_probs=197.4
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC--CCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEE-
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA--PPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQV- 77 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~- 77 (292)
|.+++.+|+|.|+|.+.|..|......+.|.+.. .|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++...
T Consensus 66 i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~ 143 (395)
T 1bih_A 66 FLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGAD 143 (395)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSC
T ss_pred EecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcC
Confidence 6789999999999999998777654446666543 3332 3345567789999999996 78899999999986211
Q ss_pred eec-cCCCcceeEEeeecEEEEccCCCCCCe---EEEEEEEeCCcCeeEEEEEEEEe-ecCCC-----CCeEEeCCCCce
Q psy15128 78 LMF-PGNAYGHLHVTQEGTLRIQGVQKEDAG---FFVCSALSVAGSTTVRAFLQVTS-VEDTP-----PPIVQVGPSNQT 147 (292)
Q Consensus 78 ~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~g---~Y~C~~~~~~~~~~~~~~l~v~~-~~~~~-----~~~~~~~~~~~~ 147 (292)
... ......+.....++.|.|.+++.+|.| .|+|.+.+..+............ ..... .....+.+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 223 (395)
T 1bih_A 144 PNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMM 223 (395)
T ss_dssp GGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEE
T ss_pred cccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceE
Confidence 111 111123344455668999999999999 99999999887754433222211 11000 011112345677
Q ss_pred ecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCC-ccEEEc--CC-CcEEEEeeecCCCCC-------------------
Q psy15128 148 LPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPED-TRINVS--SS-GSLQIDVLRDDFRAE------------------- 204 (292)
Q Consensus 148 ~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~-~~~~~~--~~-~~l~i~~~~~~d~g~------------------- 204 (292)
+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .++... .. ..|.|.++..+|+|.
T Consensus 224 ~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l 303 (395)
T 1bih_A 224 AKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKL 303 (395)
T ss_dssp EETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEE
T ss_pred EECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEE
Confidence 8899999999999999999999999999886542 222211 12 269999999999982
Q ss_pred -----------Ccc-eEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccccccc
Q psy15128 205 -----------PKD-TRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGAL 272 (292)
Q Consensus 205 -----------~~~-~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 272 (292)
+.. ..+.+|+.+.|.|.+ .|.|.+.+.|+++|.++.. .++.+..+ .|.|..+..+
T Consensus 304 ~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~---~~~~~~~~---------~L~i~~~~~~ 370 (395)
T 1bih_A 304 TVVSAPKYEQKPEKVIVVKQGQDVTIPCKV-TGLPAPNVVWSHNAKPLSG---GRATVTDS---------GLVIKGVKNG 370 (395)
T ss_dssp EEEEEEEEEECCCSEEEECTTSCEEEECEE-EEESCCCCEEEETTEECCS---SSEEEETT---------EEEESSCCST
T ss_pred EEEcCCccccCCCcceEecCCCeEEEEEEE-CcccCCeeEEEECCEECCC---CceEEECC---------EEEEeeCCcc
Confidence 223 567899999999998 7999999999999998842 24444332 6889999999
Q ss_pred ccceeEEEEeeccccccc
Q psy15128 273 SDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 273 ~~g~y~C~a~n~~g~~~~ 290 (292)
|+|.|+|.|+|..|.++.
T Consensus 371 d~G~Y~C~a~N~~G~~~~ 388 (395)
T 1bih_A 371 DKGYYGCRATNEHGDKYF 388 (395)
T ss_dssp TCEEEEEEEEETTEEEEE
T ss_pred cCEEEEEEEEccCCCceE
Confidence 999999999999998764
No 7
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=4.2e-37 Score=249.19 Aligned_cols=273 Identities=23% Similarity=0.365 Sum_probs=202.4
Q ss_pred ccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEe-CCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEeec
Q psy15128 3 TEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVV-RPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 3 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~ 80 (292)
.+++.+|+|.|+|.+.|..|...+..+.|.|..+|.+.. ......+.+|+.+.|.|.+ .+.|.+.+.|++++....
T Consensus 82 ~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~-- 159 (404)
T 3p3y_A 82 GGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPI-- 159 (404)
T ss_dssp TCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBC--
T ss_pred CCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCcccc--
Confidence 378899999999999998887765558899988776543 3345788899999999998 678889999999875432
Q ss_pred cCCCcceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcCeeEE---EEEEEEeecC--CCCCeEEeCC---CCceecCC
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGSTTVR---AFLQVTSVED--TPPPIVQVGP---SNQTLPLH 151 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~~~~~---~~l~v~~~~~--~~~~~~~~~~---~~~~~~~g 151 (292)
....+.....++.|.|.++..+| .|.|+|.+.+..+..... ..+.+..... ..+|.+.... ....+.+|
T Consensus 160 --~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G 237 (404)
T 3p3y_A 160 --TQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRG 237 (404)
T ss_dssp --CCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETT
T ss_pred --CCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecC
Confidence 11223344456789999999999 599999999877653222 3344332110 1112211111 12457899
Q ss_pred CeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCC----------------------------
Q psy15128 152 SVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRA---------------------------- 203 (292)
Q Consensus 152 ~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g---------------------------- 203 (292)
+.+.|.|.+.+.|.+.+.|++++..+..... ......+.|.|.++..+|+|
T Consensus 238 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 316 (404)
T 3p3y_A 238 MDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWL 316 (404)
T ss_dssp SCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEE
T ss_pred CCEEEEEEECCCCCCcEEEEECCEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeee
Confidence 9999999999999999999999998876433 33344568999999999998
Q ss_pred -CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCc-eEEecCCCccccccccccccccccccccceeEEEE
Q psy15128 204 -EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK-RVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIA 281 (292)
Q Consensus 204 -~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a 281 (292)
.+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+...... ..... ...|.|..+..+|+|.|+|.|
T Consensus 317 ~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a 386 (404)
T 3p3y_A 317 DEPKNLILAPGEDGRLVCRA-NGNPKPTVQWMVNGEPLQSAPPNPNREVA---------GDTIIFRDTQISSRAVYQCNT 386 (404)
T ss_dssp ECCCCEEECTTCCEEEECEE-EEESCCEEEEEETTEEGGGSCCCTTEEEE---------TTEEEESSCCSSCCCEEEEEE
T ss_pred ccCCcceeecCCcEEEEEEc-cccCCCceEEEECCEecCCCCCCceEEec---------CCEEEEeecCHHHCEEEEEEE
Confidence 2345677889999999998 89999999999999998643322 22221 126889999999999999999
Q ss_pred eeccccccc
Q psy15128 282 KNIRNQQQH 290 (292)
Q Consensus 282 ~n~~g~~~~ 290 (292)
.|..|.++.
T Consensus 387 ~N~~G~~~~ 395 (404)
T 3p3y_A 387 SNEHGYLLA 395 (404)
T ss_dssp EETTEEEEE
T ss_pred EeCCCcEEE
Confidence 999998764
No 8
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5e-36 Score=256.51 Aligned_cols=255 Identities=17% Similarity=0.293 Sum_probs=198.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC-cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP-SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.|..+...+..+.|.|..+| ...+.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 168 i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~-- 245 (642)
T 1e07_A 168 LFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQ-- 245 (642)
T ss_pred EeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcc--
Confidence 678999999999999999887755555888888544 34455666778899999999999889999999999987652
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA 160 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 160 (292)
....|.|.+++.+|+|.|+|.+.|..+.......+.+.+....+.+.+.. +....+..|+.+.|.|.+
T Consensus 246 -----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~~~~g~~v~l~C~~ 313 (642)
T 1e07_A 246 -----------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS-NNSNPVEDEDAVALTCEP 313 (642)
T ss_pred -----------cCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEc-CCceeEecCCcEEEEEEC
Confidence 13569999999999999999999988776555444554443333444443 333445568889999999
Q ss_pred ccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC-------------------------------cceE
Q psy15128 161 VGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP-------------------------------KDTR 209 (292)
Q Consensus 161 ~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~-------------------------------~~~~ 209 (292)
.+.| +.+.|+++|..+............+.|.|.++..+|+|.| ....
T Consensus 314 ~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~ 392 (642)
T 1e07_A 314 EIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTY 392 (642)
T ss_pred CCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceE
Confidence 8875 7899999999887643222223456899999999999822 2335
Q ss_pred EeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 210 VASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 210 ~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... ..|.|..+...|+|.|+|.|.|..|...
T Consensus 393 ~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~~~~~------------------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 453 (642)
T 1e07_A 393 YRPGVNLSLSCHA-ASNPPAQYSWLIDGNIQQHT------------------QELFISNITEKNSGLYTCQANNSASGHS 453 (642)
T ss_pred ecCCCcEEEEEEc-CccCCCeEEEEECCEEcCCC------------------ceEEEccCChhhCeEEEEEEEcCCCCCc
Confidence 6789999999998 89999999999999887411 1477888999999999999999998765
Q ss_pred c
Q psy15128 290 H 290 (292)
Q Consensus 290 ~ 290 (292)
.
T Consensus 454 ~ 454 (642)
T 1e07_A 454 R 454 (642)
T ss_pred c
Confidence 4
No 9
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=5e-38 Score=253.34 Aligned_cols=271 Identities=20% Similarity=0.293 Sum_probs=200.8
Q ss_pred cccCCcCC------CeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCC---CeeEEEE
Q psy15128 2 ITEVKKSD------EGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPL---PSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D------~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~v~W~~ 72 (292)
|.+++.+| +|.|+|.+.|..|...+..+.|.+..+|.+...+....+.+|+.++|.|.+.+.+. +.+.|++
T Consensus 63 i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~ 142 (388)
T 2v5m_A 63 FPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHT 142 (388)
T ss_dssp ECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEE
T ss_pred ecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEe
Confidence 66788887 99999999998887655558888888888777777788999999999999987643 6899999
Q ss_pred CCeEEeeccCCCcceeEEeeecEEEEccCCCCCC-eEEEEEEEeCCcCeeE-E---EEEEEEeecCCCCCeE-EeCCCCc
Q psy15128 73 EGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDA-GFFVCSALSVAGSTTV-R---AFLQVTSVEDTPPPIV-QVGPSNQ 146 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~-g~Y~C~~~~~~~~~~~-~---~~l~v~~~~~~~~~~~-~~~~~~~ 146 (292)
++..+.........+.....++.|.|.+++.+|. |.|+|.+.+..+.... . ..+.+........|.+ .......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~ 222 (388)
T 2v5m_A 143 DEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPL 222 (388)
T ss_dssp TTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCE
T ss_pred CCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCce
Confidence 9877643322223344455567899999999999 9999999987543322 1 2344432110001111 1122334
Q ss_pred eecCCCeEEEEeEeccCCCCceEEEeCCeeCCC-----CCccEEEcCCCcEEEEeeecCCCCC-----------------
Q psy15128 147 TLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPP-----EDTRINVSSSGSLQIDVLRDDFRAE----------------- 204 (292)
Q Consensus 147 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~-----~~~~~~~~~~~~l~i~~~~~~d~g~----------------- 204 (292)
.+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...++. ...+.|.|.++..+|+|.
T Consensus 223 ~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 301 (388)
T 2v5m_A 223 ELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETV 301 (388)
T ss_dssp EEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEE
Confidence 578899999999999999999999997543321 112222 235689999999999982
Q ss_pred ------------CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccccccc
Q psy15128 205 ------------PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGAL 272 (292)
Q Consensus 205 ------------~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 272 (292)
+....+.+|+.+.|.|.+ .+.|.+.|.|+++|..+... ...|.|..+..+
T Consensus 302 l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~i~~~-----------------~~~L~i~~v~~~ 363 (388)
T 2v5m_A 302 LTVTAPLSAKIDPPTQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIGHS-----------------ESVLRIESVKKE 363 (388)
T ss_dssp EEEEEEEEEEEESSEEEECTTSCEEEEEEE-EEECCCEEEEEETTEECSCC-----------------SSEEEESSCCGG
T ss_pred EEEeCCCccccCCCcEEecCCCCEEEEEEe-ccccCCeEEEEECCEECccC-----------------CCEEEEecCChh
Confidence 245567899999999998 89999999999999988421 125888999999
Q ss_pred ccceeEEEEeecccccccC
Q psy15128 273 SDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 273 ~~g~y~C~a~n~~g~~~~~ 291 (292)
|+|.|+|.|+|..|+++.+
T Consensus 364 d~G~Y~C~a~N~~G~~~~~ 382 (388)
T 2v5m_A 364 DKGMYQCFVRNDRESAEAS 382 (388)
T ss_dssp GCEEEEEEEECSSCEEEEE
T ss_pred hCEEEEEEEEcCCCcEEEE
Confidence 9999999999999988653
No 10
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=2.3e-37 Score=248.97 Aligned_cols=271 Identities=23% Similarity=0.310 Sum_probs=198.3
Q ss_pred cccCCc-CCCeeEEEEEEecccccccccEEEEEeCCCcEEe-CCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKK-SDEGKYQCYVQNMVGERETKPALLTVHAPPSFVV-RPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~ 78 (292)
|.++.. +|+|.|+|.+.|..|......+.|.|...|.+.. .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 65 i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~ 144 (382)
T 1cs6_A 65 ISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNF 144 (382)
T ss_dssp EESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCB
T ss_pred EecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccc
Confidence 566776 9999999999998887655557888876555443 3456778999999999985 456888999999886542
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE-----EEEEEEeec-CCCCCeEEe-CCCCceecCC
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-----AFLQVTSVE-DTPPPIVQV-GPSNQTLPLH 151 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~-----~~l~v~~~~-~~~~~~~~~-~~~~~~~~~g 151 (292)
.... .........+.|.|.+++.+|+|.|+|.+.+..+..... ..+.+.... ...+|.+.. .+....+.+|
T Consensus 145 ~~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G 222 (382)
T 1cs6_A 145 IPAD--GRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTG 222 (382)
T ss_dssp CCCC--SSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETT
T ss_pred cccC--ceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCC
Confidence 2111 111112234689999999999999999999876433222 233332110 111233333 3456678899
Q ss_pred CeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCC---------------------------
Q psy15128 152 SVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAE--------------------------- 204 (292)
Q Consensus 152 ~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~--------------------------- 204 (292)
+.+.|.|.+.+.|.+.+.|++++..+... .......|.|.++..+|+|.
T Consensus 223 ~~v~l~C~~~g~p~~~i~W~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 298 (382)
T 1cs6_A 223 QMVTLECFAFGNPVPQIKWRKLDGSQTSK----WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWL 298 (382)
T ss_dssp CCEEEECEEEEESCCEEEEEECCSCCSCC----CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred CeEEEEEEEccCCCCEEEEEECCcccccE----EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcc
Confidence 99999999999999999999988776531 12245578898898888882
Q ss_pred --CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 205 --PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 205 --~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+. ...++..... .|.|..+..+|+|.|+|.|+
T Consensus 299 ~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~g~~~~--~~~~~~~~~~---------~L~i~~v~~~d~G~Y~C~a~ 366 (382)
T 1cs6_A 299 DVITDTEADIGSDLRWSCVA-SGKPRPAVRWLRDGQPLA--SQNRIEVSGG---------ELRFSKLVLEDSGMYQCVAE 366 (382)
T ss_dssp ECCCCEEEETTCCEEEECEE-EEESCCEEEEEETTEECC--CCSSEEEETT---------EEEESSCCGGGCEEEEEEEE
T ss_pred cCCCccEEcCCCeEEEEEEe-eeecCCEEEEEECCEECC--CCceEEEECC---------EEEECcCCcccCEEEEEEEE
Confidence 245567899999999998 899999999999999885 3344443322 68899999999999999999
Q ss_pred eccccccc
Q psy15128 283 NIRNQQQH 290 (292)
Q Consensus 283 n~~g~~~~ 290 (292)
|..|....
T Consensus 367 N~~G~~~~ 374 (382)
T 1cs6_A 367 NKHGTVYA 374 (382)
T ss_dssp ETTEEEEE
T ss_pred eCCCeEEE
Confidence 99998764
No 11
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=2.1e-35 Score=228.11 Aligned_cols=241 Identities=22% Similarity=0.380 Sum_probs=184.9
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. ..............|.|.+++.+|+|.|+|.+.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRP--GGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCS--SSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcC--CCcEEEEEcCCEEEEEEecCCcccCEEEEEEEE
Confidence 578888888889999999999999999988889999999987632 111111112234689999999999999999999
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeC-CCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCcc-EEE-cCCCc
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVG-PSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTR-INV-SSSGS 191 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~-~~~-~~~~~ 191 (292)
|..+.......|.|.. +|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ... .....
T Consensus 82 n~~g~~~~~~~l~V~~-----~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 156 (284)
T 2rik_A 82 NVAGKDSCSAQLGVQE-----PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAV 156 (284)
T ss_dssp ETTEEEEEEEEEEEEC-----CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred ECCceEEEEEEEEccC-----CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEE
Confidence 9888776667777653 3444333 34455789999999999999999999999999988765321 111 22346
Q ss_pred EEEEeeecCCCC-----------------------------CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEecc
Q psy15128 192 LQIDVLRDDFRA-----------------------------EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDL 242 (292)
Q Consensus 192 l~i~~~~~~d~g-----------------------------~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 242 (292)
|.|.++..+|+| .+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~~~ 235 (284)
T 2rik_A 157 LEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECEL-QGTPPFQVSWHKDKRELRS 235 (284)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEEC-BSSSCCEEEEEETTEEECB
T ss_pred EEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEE-EecCCCEEEEEECCEECcC
Confidence 888899988888 2244577899999999998 8999999999999999864
Q ss_pred CCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 243 ESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.. ++.+..++ ....|.|..+..+|+|.|+|.|+|..|+++.
T Consensus 236 ~~--~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 276 (284)
T 2rik_A 236 GK--KYKIMSEN-----FLTSIHILNVDSADIGEYQCKASNDVGSYTC 276 (284)
T ss_dssp TT--TEEEEEET-----TEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CC--CEEEEEcC-----CEEEEEEcCCCcccCEEEEEEEEeCCCceeE
Confidence 33 33322221 1236889999999999999999999998764
No 12
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=247.51 Aligned_cols=264 Identities=13% Similarity=0.135 Sum_probs=172.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..+|.+.. ..+..+..|+.+.|.|.+.|.|.|.|.|++++.......
T Consensus 107 I~~v~~~D~G~Y~C~a~N~~g~~~~~-~~l~V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~ 184 (423)
T 3qs7_E 107 ILKMTETQAGEYLLFIQSEATNYTIL-FTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCK 184 (423)
T ss_dssp ESSCCSSSCSEEEEEEEC--CEEEEE-EEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------
T ss_pred EeecCcccCEEEEEEEEcCCCcEEEE-EEEEEecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccc
Confidence 67999999999999999998876655 8888886665421 122335568888999999999999999999876442110
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
....... ......| ...|+|.|+|.|.|..|.... ..+.+.+.. ++.. .+....+.+|+.+.|.|.+.
T Consensus 185 ~~~~~~~-~~~~~~l-----~~~d~G~Y~C~A~N~~G~~~~-~~~~l~V~~---~p~~--~~~~~~v~~G~~v~L~C~~~ 252 (423)
T 3qs7_E 185 EESPAVV-KKEEKVL-----HELFGTDIRCCARNELGRECT-RLFTIDLNQ---TPQT--TLPQLFLKVGEPLWIRCKAV 252 (423)
T ss_dssp -----CE-EECCSEE-----CCCCSSCEEEEEECSSCEEEE-ECEEEESSS---CCCS--STTEEEEETTSCEEEEEEEE
T ss_pred ccccccc-cccceEE-----ecccCeEEEEEEEcCCCCcce-eeEEEEEec---CCcc--CCCceEEeCCCeEEEEEEEE
Confidence 0000000 0111112 578999999999998876543 223333211 1111 33456688999999999998
Q ss_pred c-CCCCceEEEeCCeeCCCCCcc--EE------EcCCCcEEEEeeecCCCCCC---------------------------
Q psy15128 162 G-SPPPHIRWYKNGNSLPPEDTR--IN------VSSSGSLQIDVLRDDFRAEP--------------------------- 205 (292)
Q Consensus 162 ~-~p~~~~~W~~~~~~l~~~~~~--~~------~~~~~~l~i~~~~~~d~g~~--------------------------- 205 (292)
+ .|.+.+.|++++..+...... .. ....+.|.|.++..+|+|.|
T Consensus 253 g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~ 332 (423)
T 3qs7_E 253 HVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNS 332 (423)
T ss_dssp ESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC--
T ss_pred cCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCC
Confidence 8 577899999999887553110 01 11224699999999999922
Q ss_pred -cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 206 -KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 206 -~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
....+.+|+.+.|.|.+ .|.|.|.|.|+|+|+.|...... . .+.. .+.+......|+|.|+|.|+|.
T Consensus 333 ~~~~~v~~G~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~--~--~~~~-------~~~~~~~~~~D~G~YtC~A~N~ 400 (423)
T 3qs7_E 333 SEDYEIDQYEEFCFSVRF-KAYPQIRCTWTFSRKSFPCEQKG--L--DNGY-------SISKFCNHKHQPGEYIFHAEND 400 (423)
T ss_dssp -CEECCCTTCCCCEEEEE-EEESCCEEEEEETTEEEECBCCB--C--SSSS-------EEEEECCCTTCCSCEEEEEEET
T ss_pred CccEEecCCCeEEEEEEE-EEcCCCeEEEEECCEECCCcccc--c--cCCc-------EEEEEecccccCEEEEEEEEcC
Confidence 23456689999999998 89999999999999998632210 0 0000 0111234457999999999999
Q ss_pred ccccccC
Q psy15128 285 RNQQQHG 291 (292)
Q Consensus 285 ~g~~~~~ 291 (292)
.|+++.+
T Consensus 401 ~G~~~~s 407 (423)
T 3qs7_E 401 DAQFTKM 407 (423)
T ss_dssp TEEEEEE
T ss_pred CceEEEE
Confidence 9998753
No 13
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.1e-36 Score=254.74 Aligned_cols=277 Identities=18% Similarity=0.174 Sum_probs=187.4
Q ss_pred cccCCcCCCe-eEEEEEEecccccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCe-eEEEECCe
Q psy15128 2 ITEVKKSDEG-KYQCYVQNMVGERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPS-VFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-v~W~~~~~ 75 (292)
|.+++.+|+| .|+|.+.+..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++.
T Consensus 172 i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~ 251 (524)
T 2ec8_A 172 IKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENS 251 (524)
T ss_dssp EESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTC
T ss_pred EeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCC
Confidence 6789999999 99999999877665645888886 678888888888899999999999999988776 99999987
Q ss_pred EE--eeccCCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCC---CCceec
Q psy15128 76 QV--LMFPGNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGP---SNQTLP 149 (292)
Q Consensus 76 ~~--~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~---~~~~~~ 149 (292)
.+ ....... .........+.|.|.+++.+|+|.|+|.+.|..|.......|.|.. +|.+...+ ....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-----~p~~~~~~~~~~~~~v~ 326 (524)
T 2ec8_A 252 QTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD-----KGFINIFPMINTTVFVN 326 (524)
T ss_dssp SCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES-----SCEEEEEESSCSEEEEC
T ss_pred CCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec-----cCceEeecCCCceEEEc
Confidence 63 1110000 0000233456899999999999999999999888877777777653 34444332 356788
Q ss_pred CCCeEEEEeEeccCCCCc-eEEEeCCeeCCCCCccEEEcCC-------CcEEEEeeecCCCCCCcc--------------
Q psy15128 150 LHSVAFLPCQAVGSPPPH-IRWYKNGNSLPPEDTRINVSSS-------GSLQIDVLRDDFRAEPKD-------------- 207 (292)
Q Consensus 150 ~g~~v~l~C~~~~~p~~~-~~W~~~~~~l~~~~~~~~~~~~-------~~l~i~~~~~~d~g~~~~-------------- 207 (292)
+|+.+.|.|.+.+.|.|. +.|++++.++.....++....+ ..|.|.++..+|+|.|..
T Consensus 327 ~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 327 DGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp TTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEE
Confidence 999999999999999999 9999999988765433333322 379999999999994310
Q ss_pred --------e----EEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccC-------CCce--EEecCCCcccccccccccc
Q psy15128 208 --------T----RVASGETALLECGPPKGQPEPTLHWKKNGQFIDLE-------SSKR--VSILGDPWFDSRRSRSIFG 266 (292)
Q Consensus 208 --------~----~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-------~~~~--~~~~~~~~~~~~~~~~l~i 266 (292)
. ...+| .|.|.+ .|.|.|.+.|++++..+... +... .....++.... ...+
T Consensus 407 l~V~~~P~i~~~~~~~~g---~l~C~~-~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~s~l 478 (524)
T 2ec8_A 407 VYVNTKPEILTYDRLVNG---MLQCVA-AGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVV----QSSI 478 (524)
T ss_dssp EEECEEEEEEEEECCSSS---CEEEEE-EEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEE----EEEE
T ss_pred EEEecCCeEeecccCcCc---EEEEEE-EeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceE----EEEE
Confidence 0 11234 899998 89999999999997765210 0000 11111111000 0113
Q ss_pred ccccccccceeEEEEeecccccccC
Q psy15128 267 SVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 267 ~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
.....+|+|.|+|.|+|.+|.++.+
T Consensus 479 ~~~~~~d~G~Y~C~a~N~~G~~~~~ 503 (524)
T 2ec8_A 479 DSSAFKHNGTVECKAYNDVGKTSAY 503 (524)
T ss_dssp CCCSCCC-----CEEECSSCEEECC
T ss_pred EEEEccCCEEEEEEEEcCCCceEEE
Confidence 3344589999999999999998654
No 14
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=247.47 Aligned_cols=283 Identities=15% Similarity=0.139 Sum_probs=191.4
Q ss_pred cccCCcCCCeeEEEEEEeccccc--ccccEEEEE----eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCC--eeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER--ETKPALLTV----HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLP--SVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~--~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+.. ....+.|.| ..+|.+...+....+.+|+.++|.|.+.+.|++ .+.|+++
T Consensus 74 I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 153 (523)
T 2rcj_C 74 ISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKAD 153 (523)
T ss_pred ECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecC
Confidence 78999999999999999876532 223378888 356767666766677789999999999987654 8999999
Q ss_pred CeEEeeccCC----CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceec
Q psy15128 74 GSQVLMFPGN----AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLP 149 (292)
Q Consensus 74 ~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 149 (292)
+..+...... ..........+.|.|.++..+|+|.|+|.+.|..+.......+.+... ...+|.+...+....+.
T Consensus 154 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~-~~~~P~v~~~~~~~~~~ 232 (523)
T 2rcj_C 154 GSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSA-STKGPSVFPLAPSSKST 232 (523)
T ss_pred CCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCC-CCcCCEEEecCCCcccc
Confidence 8765311100 000111122347999999999999999999998776554444322111 12234444333344567
Q ss_pred CCCeEEEEeEeccC-CCC-ceEEEeCCeeCCCCCccEEEcCCC------cEEEEeeecCCCCCC----------------
Q psy15128 150 LHSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPEDTRINVSSSG------SLQIDVLRDDFRAEP---------------- 205 (292)
Q Consensus 150 ~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~~~~~~~~~~~------~l~i~~~~~~d~g~~---------------- 205 (292)
+|+.+.|.|.+.+. |.| .+.|++++..+...........++ .|.|.++..+| |.|
T Consensus 233 ~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~ 311 (523)
T 2rcj_C 233 SGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKR 311 (523)
T ss_pred cCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEe
Confidence 99999999999886 767 899999998754311111111222 68888888888 822
Q ss_pred --------------cce-EEeCCCceEEEeeCCCCCCC----CeEEEeEcCeEeccCCCceEEecCCCcccccccccccc
Q psy15128 206 --------------KDT-RVASGETALLECGPPKGQPE----PTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFG 266 (292)
Q Consensus 206 --------------~~~-~~~~g~~~~l~C~~~~~~p~----~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 266 (292)
... .+.+|+.+.|.|.+ .|.|+ +.|.|+++|.++............++.+. ....|.|
T Consensus 312 l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~-~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~--~~s~L~i 388 (523)
T 2rcj_C 312 VEPLSLPSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYR--VVSVLTV 388 (523)
T ss_pred cCCCcCceEEecCCCchhhcccCCceEEEEEE-ecccCCCCceEEEEEECCeEccCCccCCceecCCCcEE--EEEEEEE
Confidence 111 15679999999998 66543 59999999999864332222222333222 2235778
Q ss_pred ccccccccceeEEEEeecccccc
Q psy15128 267 SVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 267 ~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
..+..+|+|.|+|.|.|..|...
T Consensus 389 ~~~~~~d~G~Y~C~a~n~~~~~~ 411 (523)
T 2rcj_C 389 LHQNWLDGKEYKCKVSNKALPAP 411 (523)
T ss_pred CHHHhcCCCeEEEEEeCCCCCCc
Confidence 88999999999999999887754
No 15
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=248.64 Aligned_cols=274 Identities=12% Similarity=0.093 Sum_probs=181.3
Q ss_pred cCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeeccC
Q psy15128 4 EVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMFPG 82 (292)
Q Consensus 4 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~ 82 (292)
.++.+|+|.|+|.|.|..|......+.|.|..+|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.....
T Consensus 197 ~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~ 274 (527)
T 3qs9_E 197 VLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNY 274 (527)
T ss_dssp EECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGE
T ss_pred eccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCce
Confidence 456789999999999998887665588888877765 55577888999999999996 789999999999875421100
Q ss_pred CCc----ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCC--CCceecCCCeEEE
Q psy15128 83 NAY----GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGP--SNQTLPLHSVAFL 156 (292)
Q Consensus 83 ~~~----~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~--~~~~~~~g~~v~l 156 (292)
... ..........|.|.+++.+|+|.|+|.+.|. ....+.|.|.. ++.+...+ ....+.+|+.+.|
T Consensus 275 ~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~-----~p~i~~~~~~~~~~v~~G~~v~L 346 (527)
T 3qs9_E 275 FEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE-----KGFINATNSSEDYEIDQYEEFCF 346 (527)
T ss_dssp EEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC-------CEEECCCSCCEECCCTTCCCCE
T ss_pred eeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEc-----cCccccccCcccEEEcCCCeEEE
Confidence 000 0011223457999999999999999999887 44455555542 34444433 2345678999999
Q ss_pred EeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC----------------------cceEEeCCC
Q psy15128 157 PCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP----------------------KDTRVASGE 214 (292)
Q Consensus 157 ~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~----------------------~~~~~~~g~ 214 (292)
.|.+.++|.|.+.|+|+|.++...... ......|.|.++..+|+|.| +.... ...
T Consensus 347 ~C~~~g~P~p~i~W~k~g~~l~~~~~~--~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~-~~~ 423 (527)
T 3qs9_E 347 SVRFKAYPQIRCTWTFSRKSFPCEQKG--LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLA-EAS 423 (527)
T ss_dssp EEEEEEESCCEEEEEETTEEEECBCCB--CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEE-CCC
T ss_pred EEEEEecCCCEEEEEECCEECcCCccc--ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEE-eCC
Confidence 999999999999999999988654321 22456899999999999944 22222 223
Q ss_pred ceEEEeeCCCCCCCCeEEEeEcCeEeccCCCce----EEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 215 TALLECGPPKGQPEPTLHWKKNGQFIDLESSKR----VSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 215 ~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
...|.|.+ .|.|.|.|.|++++.......... ................+.+......|+|.|+|.|.|.+|++++
T Consensus 424 ~~~l~C~a-~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~ 502 (527)
T 3qs9_E 424 ASQASCFS-DGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCE 502 (527)
T ss_dssp CE---EEE-ECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEE
T ss_pred CCEEEEEE-EEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCcee
Confidence 45789998 899999999998765442111100 0000000000000111223333356999999999999999875
Q ss_pred C
Q psy15128 291 G 291 (292)
Q Consensus 291 ~ 291 (292)
+
T Consensus 503 ~ 503 (527)
T 3qs9_E 503 T 503 (527)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2e-35 Score=259.13 Aligned_cols=273 Identities=25% Similarity=0.418 Sum_probs=206.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 393 i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~ 471 (816)
T 3dmk_A 393 IESVKKEDKGMYQCFVRNDRESAEAS-AELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIA 471 (816)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEC-CEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECC
T ss_pred EcCCCHHHCEEEEEEEECCCCcEEEE-EEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECC
Confidence 68899999999999999988766555 677773 56777776777788999999999999999999999999998763
Q ss_pred eccCCCcceeE-E----eeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCe
Q psy15128 79 MFPGNAYGHLH-V----TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSV 153 (292)
Q Consensus 79 ~~~~~~~~~~~-~----~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (292)
.. ....... . .....|.|.++..+|+|.|+|.+.|..|.......|.|.. +|.+ ..+....+..|+.
T Consensus 472 ~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-----~p~~-~~~~~~~v~~G~~ 543 (816)
T 3dmk_A 472 NN--DRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYG-----LPYI-RQMEKKAIVAGET 543 (816)
T ss_dssp SC--TTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECS-----SCEE-CCCCCEEEETTCC
T ss_pred CC--CCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEec-----CCee-EccCCeEEecCCe
Confidence 21 1110000 0 1123699999999999999999999988877777777653 3333 3445566889999
Q ss_pred EEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeee-cCCCCCC---------------------------
Q psy15128 154 AFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLR-DDFRAEP--------------------------- 205 (292)
Q Consensus 154 v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~-~~d~g~~--------------------------- 205 (292)
+.|.|.+.+.|.+.+.|++++..+... .+.....+++|.|.++. .+|+|.|
T Consensus 544 v~l~C~~~g~p~~~i~W~k~~~~l~~~-~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~ 622 (816)
T 3dmk_A 544 LIVTCPVAGYPIDSIVWERDNRALPIN-RKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRII 622 (816)
T ss_dssp EEEECCEECSSEEEEEEEETTEESCCS-TTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCB
T ss_pred EEEEEEecCCCCCEEEEEECCeEcccC-CceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccc
Confidence 999999999988899999999998764 45556677788888887 4677711
Q ss_pred ----cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEE
Q psy15128 206 ----KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIA 281 (292)
Q Consensus 206 ----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a 281 (292)
....+.+|+.+.|.|.+..+.+++.+.|+++|+.+............. ....|.|..+...|+|.|+|.|
T Consensus 623 ~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a 696 (816)
T 3dmk_A 623 PFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGR------RGSVLTIEAVEASHAGNFTCHA 696 (816)
T ss_dssp CCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETT------TEEEEEEESCCGGGCEEEEEEE
T ss_pred cccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCC------CeeEEEEccCChhhCEEEEEEE
Confidence 334577899999999984455556999999999885322222221111 2236889999999999999999
Q ss_pred eeccccccc
Q psy15128 282 KNIRNQQQH 290 (292)
Q Consensus 282 ~n~~g~~~~ 290 (292)
.|..|..+.
T Consensus 697 ~N~~g~~~~ 705 (816)
T 3dmk_A 697 RNLAGHQQF 705 (816)
T ss_dssp ECSSCEEEE
T ss_pred EeCCccEEE
Confidence 999998764
No 17
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=3.2e-36 Score=251.87 Aligned_cols=275 Identities=13% Similarity=0.137 Sum_probs=203.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEE-CCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ-EGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~-~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+ |. ...+.|.|..+|.+...+....+.+|+.+.|.|.+.+.+.+.+.|++ ++..+.
T Consensus 84 I~~~~~~D~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~-- 157 (524)
T 2ec8_A 84 TEKAEATNTGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLP-- 157 (524)
T ss_dssp ESSCCSTTCEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCC--
T ss_pred EcccchhhCEEEEEeecC--Cc--ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcC--
Confidence 789999999999999988 32 34488888877766667777889999999999999887768999998 665442
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCe-EEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAG-FFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPC 158 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g-~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 158 (292)
...+......+.|.|.+++.+|+| .|+|.+.+..+... ....|.|.. ....+|.+...+....+.+|+.+.|.|
T Consensus 158 ---~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~-~~~~~p~i~~~~~~~~v~~G~~v~L~C 233 (524)
T 2ec8_A 158 ---KDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRP-AFKAVPVVSVSKASYLLREGEEFTVTC 233 (524)
T ss_dssp ---SSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEEC-CCCSCCEEECSCSEEEEETTSCEEEEE
T ss_pred ---CCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEe-CCCCCCcEEecCCcceEEcCCcEEEEE
Confidence 122344455678999999999999 99999998755442 245555542 112466777777777889999999999
Q ss_pred EeccCCCCc-eEEEeCCeeC--CCCCccEEE------cCCCcEEEEeeecCCCCCC------------------------
Q psy15128 159 QAVGSPPPH-IRWYKNGNSL--PPEDTRINV------SSSGSLQIDVLRDDFRAEP------------------------ 205 (292)
Q Consensus 159 ~~~~~p~~~-~~W~~~~~~l--~~~~~~~~~------~~~~~l~i~~~~~~d~g~~------------------------ 205 (292)
.+.+.|.+. +.|++++..+ ... ..... ...+.|.|.++..+|+|.|
T Consensus 234 ~~~g~p~p~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 312 (524)
T 2ec8_A 234 TIKDVSSSVYSTWKRENSQTKLQEK-YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGF 312 (524)
T ss_dssp EEEESSTTCEEEEEETTCSCCCCEE-EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCE
T ss_pred EEecCCCcEEEEEEeCCCCCccccc-cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCc
Confidence 999988887 9999999874 221 11111 2235799999999999922
Q ss_pred --------cceEEeCCCceEEEeeCCCCCCCCe-EEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccce
Q psy15128 206 --------KDTRVASGETALLECGPPKGQPEPT-LHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQ 276 (292)
Q Consensus 206 --------~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 276 (292)
....+.+|+.+.|.|.+ .+.|.+. +.|+++|.++..... ++....++.. ......|.|..+..+|+|.
T Consensus 313 ~~~~~~~~~~~~v~~G~~v~l~C~~-~g~P~p~~v~W~k~g~~~~~~~~-~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~ 389 (524)
T 2ec8_A 313 INIFPMINTTVFVNDGENVDLIVEY-EAFPKPEHQQWIYMNRTFTDKWE-DYPKSENESN-IRYVSELHLTRLKGTEGGT 389 (524)
T ss_dssp EEEEESSCSEEEECTTCCEEEEEEE-EEESCCCEEEEESSSCBCSSSBC-CEESCCSSSC-CEEEEEEEECSCCGGGCEE
T ss_pred eEeecCCCceEEEcCCCcEEEEEEE-eecCCCcEEEEEECCeeccCCcc-ceeEEccCCC-ceeEEEEEEeecCcccCeE
Confidence 24678899999999998 8999998 999999998863332 2322222110 1123468999999999999
Q ss_pred eEEEEeeccccccc
Q psy15128 277 WKLIAKNIRNQQQH 290 (292)
Q Consensus 277 y~C~a~n~~g~~~~ 290 (292)
|+|.|.|..|..+.
T Consensus 390 Y~C~a~N~~g~~~~ 403 (524)
T 2ec8_A 390 YTFLVSNSDVNAAI 403 (524)
T ss_dssp EEEEEECSSCEEEE
T ss_pred EEEEEEecCceEEE
Confidence 99999999998654
No 18
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=4.3e-35 Score=257.05 Aligned_cols=260 Identities=27% Similarity=0.505 Sum_probs=208.4
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 310 i~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~--- 385 (816)
T 3dmk_A 310 IKDAVVEDSGKYLCVVNNSVGGESVE-TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG--- 385 (816)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEE-EEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECS---
T ss_pred ECCCCHhHCEEEEEEEEcCCCceEEE-EEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECC---
Confidence 67899999999999999988876555 88899888877777878888999999999999999999999999998762
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
.....|.|.+++.+|+|.|+|.+.|..+.......+.+. ....+|.+...+....+.+|+.+.|.|.+.
T Consensus 386 ---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~--~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~ 454 (816)
T 3dmk_A 386 ---------HSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG--GRFDPPVIRQAFQEETMEPGPSVFLKCVAG 454 (816)
T ss_dssp ---------CCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECC--CSSCCCEEEEECCCEEECSSSCEEEEEEEE
T ss_pred ---------CCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEc--cccCCCceEecCcceEEcCCCCEEEEEEEe
Confidence 124579999999999999999999987766655555543 223466666667777889999999999999
Q ss_pred cCCCCceEEEeCCeeCCCCCccEEE----cCCC----cEEEEeeecCCCCCC----------------------------
Q psy15128 162 GSPPPHIRWYKNGNSLPPEDTRINV----SSSG----SLQIDVLRDDFRAEP---------------------------- 205 (292)
Q Consensus 162 ~~p~~~~~W~~~~~~l~~~~~~~~~----~~~~----~l~i~~~~~~d~g~~---------------------------- 205 (292)
+.|.+.+.|++++..+.... ++.. ..++ .|.|.++..+|+|.|
T Consensus 455 g~p~p~v~W~~~g~~l~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~ 533 (816)
T 3dmk_A 455 GNPTPEISWELDGKKIANND-RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQM 533 (816)
T ss_dssp CSSCCEEEEEETTEECCSCT-TEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCC
T ss_pred cCCCCEEEEEECCEECCCCC-CcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEcc
Confidence 99999999999999987643 2221 2222 588999999999922
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccccc-ccccceeEEEEeec
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLG-ALSDDQWKLIAKNI 284 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~~~g~y~C~a~n~ 284 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ..+.....++ .|.|..+. ..|+|.|+|.|.|.
T Consensus 534 ~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~~~~l~~--~~~~~~~~~~--------~l~i~~v~~~~d~G~Y~C~a~n~ 602 (816)
T 3dmk_A 534 EKKAIVAGETLIVTCPV-AGYPIDSIVWERDNRALPI--NRKQKVFPNG--------TLIIENVERNSDQATYTCVAKNQ 602 (816)
T ss_dssp CCEEEETTCCEEEECCE-ECSSEEEEEEEETTEESCC--STTEEECTTS--------EEEESSCCHHHHCEEEEEEEEES
T ss_pred CCeEEecCCeEEEEEEe-cCCCCCEEEEEECCeEccc--CCceEEecCC--------eEEEEecCccccCEEEEEEEEEC
Confidence 34567889999999998 8899999999999998853 2333332232 57788886 68999999999999
Q ss_pred cccc
Q psy15128 285 RNQQ 288 (292)
Q Consensus 285 ~g~~ 288 (292)
.|..
T Consensus 603 ~g~~ 606 (816)
T 3dmk_A 603 EGYS 606 (816)
T ss_dssp SSCE
T ss_pred CCce
Confidence 9854
No 19
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=5.4e-35 Score=226.59 Aligned_cols=238 Identities=22% Similarity=0.372 Sum_probs=182.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeC-CCeeEEEE-CCeEEeeccCCCcceeEE----eeecEEEEccCCCCCCeEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSP-LPSVFWTQ-EGSQVLMFPGNAYGHLHV----TQEGTLRIQGVQKEDAGFF 109 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~-~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~Y 109 (292)
++.+...|....+.+|+.++|.|.+.+.+ .+.+.|++ ++..+... ..+... .....|.|.+++.+|+|.|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 77 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN----QQRISVVWNDDDSSTLTIYNANIDDAGIY 77 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSS----CSSEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccC----CceEEEEEcCCCeEEEEEecCCCCCCEEE
Confidence 45677778888899999999999998876 68999999 66544211 111211 1345899999999999999
Q ss_pred EEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCC-CccEEEc
Q psy15128 110 VCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPE-DTRINVS 187 (292)
Q Consensus 110 ~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~-~~~~~~~ 187 (292)
+|.+.+..+.. .....|.+. .++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++...
T Consensus 78 ~C~~~n~~g~~~~~~~~l~v~-----~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 152 (291)
T 1qz1_A 78 KCVVTAEDGTQSEATVNVKIF-----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL 152 (291)
T ss_dssp EEEEECTTSCEEEEEEEEEEE-----CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEEC
T ss_pred EEEEEcCCCCeeEEEEEEEee-----ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEc
Confidence 99999987542 334444443 3566777777788999999999999999999999999999887543 3455566
Q ss_pred CCCcEEEEeeecCCCCCC---------------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEe
Q psy15128 188 SSGSLQIDVLRDDFRAEP---------------------------------KDTRVASGETALLECGPPKGQPEPTLHWK 234 (292)
Q Consensus 188 ~~~~l~i~~~~~~d~g~~---------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 234 (292)
.++.|.|.++..+|+|.| ....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 153 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~ 231 (291)
T 1qz1_A 153 SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDA-DGFPEPTMSWT 231 (291)
T ss_dssp TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEE-EEESCCEEEEE
T ss_pred cCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEE-EEeCCCcEEEE
Confidence 777899999999999822 12345679999999998 88999999999
Q ss_pred EcCeEeccCCC--ceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 235 KNGQFIDLESS--KRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 235 ~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
++|..+..... .++..... ...|.|..+..+|+|.|+|.|.|..|.++.
T Consensus 232 ~~g~~~~~~~~~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 282 (291)
T 1qz1_A 232 KDGEPIENEEEDDEKHIFSDD-------SSELTIRNVDKNDEAEYVCIAENKAGEQDA 282 (291)
T ss_dssp ETTEECCCC--CCSSEEECTT-------SCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ECCEECcCCCCCCcceEEcCC-------CcEEEEEecChhcCEEEEEEEEeCCCceEE
Confidence 99998864331 23333322 236889999999999999999999998764
No 20
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=251.33 Aligned_cols=262 Identities=13% Similarity=0.103 Sum_probs=177.2
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCC-CccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEee
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRP-QDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLM 79 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~ 79 (292)
.|.+++.+|+|.|+|.+.+..+..... +.|.|. |.+...+ .+.....++.+.|.|.+.|.|.|.+.|++++.....
T Consensus 106 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~-~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~ 182 (527)
T 3qs9_E 106 VILKMTETQAGEYLLFIQSEATNYTIL-FTVSIR--NTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGES 182 (527)
T ss_dssp EESSCCSSSCSEEEEEEEC--CEEEEE-EEEEEC-------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC------
T ss_pred EECcCChhhCeeEEEEEEeccccEEEE-EEEEEC--CceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCcc
Confidence 378999999999999999887665444 555555 3222221 222345577889999999999999999998765421
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE-EEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEe
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPC 158 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 158 (292)
... . ...........+...|+|.|+|.|.|..|..... ..+.+.. .+.+ .+....+.+|+.+.|.|
T Consensus 183 ~~~--~----~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~-----~p~~--~p~~~~v~~G~~v~L~C 249 (527)
T 3qs9_E 183 CKE--E----SPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ-----TPQT--TLPQLFLKVGEPLWIRC 249 (527)
T ss_dssp -------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS-----CCCC--SCCEEEECTTSCEEEEE
T ss_pred ccc--c----CCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEec-----cCcc--CCCceEEeCCCeEEEEE
Confidence 100 0 0001112223345789999999999988765543 3343321 2222 44566788999999999
Q ss_pred Eec-cCCCCceEEEeCCeeCCCCCcc--EE------EcCCCcEEEEeeecCCCCCC------------------------
Q psy15128 159 QAV-GSPPPHIRWYKNGNSLPPEDTR--IN------VSSSGSLQIDVLRDDFRAEP------------------------ 205 (292)
Q Consensus 159 ~~~-~~p~~~~~W~~~~~~l~~~~~~--~~------~~~~~~l~i~~~~~~d~g~~------------------------ 205 (292)
.+. +.|.+.+.|++++..+...... .. ....++|.|.++..+|+|.|
T Consensus 250 ~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~ 329 (527)
T 3qs9_E 250 KAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINA 329 (527)
T ss_dssp EEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEEC
T ss_pred EEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCcccc
Confidence 996 8899999999999887653211 01 11224589999999999933
Q ss_pred ----cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEE
Q psy15128 206 ----KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIA 281 (292)
Q Consensus 206 ----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a 281 (292)
....+.+|+.+.|.|.+ .|.|.|.+.|+++|+++..... ... ....|.|..+..+|+|.|+|.|
T Consensus 330 ~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~k~g~~l~~~~~--~~~---------~~~~L~I~~v~~~D~G~YtC~A 397 (527)
T 3qs9_E 330 TNSSEDYEIDQYEEFCFSVRF-KAYPQIRCTWTFSRKSFPCEQK--GLD---------NGYSISKFCNHKHQPGEYIFHA 397 (527)
T ss_dssp CCSCCEECCCTTCCCCEEEEE-EEESCCEEEEEETTEEEECBCC--BCS---------SSSEEEEECCCTTCCSCEEEEE
T ss_pred ccCcccEEEcCCCeEEEEEEE-EecCCCEEEEEECCEECcCCcc--ccc---------CCcEEEEecCCcccCEEEEEEE
Confidence 12456689999999998 8999999999999999853222 111 1225788999999999999999
Q ss_pred eeccccccc
Q psy15128 282 KNIRNQQQH 290 (292)
Q Consensus 282 ~n~~g~~~~ 290 (292)
.|..|.++.
T Consensus 398 ~N~~g~~~~ 406 (527)
T 3qs9_E 398 ENDDAQFTK 406 (527)
T ss_dssp EETTEEEEE
T ss_pred EeCCCcEEE
Confidence 999998764
No 21
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-35 Score=227.08 Aligned_cols=240 Identities=25% Similarity=0.464 Sum_probs=177.7
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee--ecEEEEccCCC-CCCeEEE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ--EGTLRIQGVQK-EDAGFFV 110 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~-~d~g~Y~ 110 (292)
..+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. .......... ...|.|.+++. +|+|.|+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~---~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNS---QRFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------C---TTEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCC---CceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 3578888888889999999999999999999999999999887621 1111111111 25799999998 9999999
Q ss_pred EEEEeCCcCeeEEEEEEEEeecCCC--CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCC--ccEEE
Q psy15128 111 CSALSVAGSTTVRAFLQVTSVEDTP--PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPED--TRINV 186 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~--~~~~~ 186 (292)
|.+.|..+.....+.|.|......+ .|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .++..
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe
Confidence 9999988877677777776432222 2667777777788999999999999999999999999999886532 24555
Q ss_pred cCCCcEEEEeeecCCCCCC---------------------------------cceEEeCCCceEEEeeCCCCCCCCeEEE
Q psy15128 187 SSSGSLQIDVLRDDFRAEP---------------------------------KDTRVASGETALLECGPPKGQPEPTLHW 233 (292)
Q Consensus 187 ~~~~~l~i~~~~~~d~g~~---------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W 233 (292)
..++.|.|.++..+|+|.| ....+.+|+.+.|.|.+ .|.|.+.+.|
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W 239 (304)
T 2yd9_A 161 LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVA-VGSPMPYVKW 239 (304)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEE-EEESCCEEEE
T ss_pred CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEE-eeeCCCEEEE
Confidence 6677899999999999822 22346789999999998 8999999999
Q ss_pred eEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 234 KKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 234 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
+++|..+.... ... . ....|.+. ...|+|.|+|.|+|..|.++.
T Consensus 240 ~~~~~~l~~~~--~~~---~------~~~~L~i~--~~~d~G~Y~C~a~N~~G~~~~ 283 (304)
T 2yd9_A 240 MQGAEDLTPED--DMP---V------GRNVLELT--DVKDSANYTCVAMSSLGVIEA 283 (304)
T ss_dssp EETTEECSCSS--SCC---B------SEEEEEEC--SCCSCEEEEEEEEETTEEEEE
T ss_pred EECCEECCCcc--ccc---C------CcEEEEEc--ccccCEEEEEEEEeCCCcEEE
Confidence 99999885322 110 1 11124444 346999999999999998864
No 22
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=221.08 Aligned_cols=236 Identities=21% Similarity=0.373 Sum_probs=176.5
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEE-CCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ-EGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~ 110 (292)
.+|.+...+....+.+|+.++|.|.+.+.|. .+.|++ ++..+. . ..+..... ...|.|.+++.+|+|.|+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~--~---~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 76 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKII--S---TQRVVVQKEGVRSRLTIYNANIEDAGIYR 76 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCC--C---BTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCcc--C---CCcEEEecCCCEEEEEEccCCcccCEEEE
Confidence 4677888888889999999999999988765 899999 554432 1 11222222 348999999999999999
Q ss_pred EEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCC-CCccEEEcC
Q psy15128 111 CSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPP-EDTRINVSS 188 (292)
Q Consensus 111 C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~-~~~~~~~~~ 188 (292)
|.+.+..+... ....+.+.. ++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...++....
T Consensus 77 C~~~n~~g~~~~~~~~l~v~~-----~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 151 (291)
T 2wim_A 77 CQATDAKGQTQEATVVLEIYQ-----KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA 151 (291)
T ss_dssp EEEECSSSCEEEEEEEEEEEC-----CCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT
T ss_pred EEEecccCceEEEEEEEEecC-----CcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc
Confidence 99999877653 334444432 34444455667788999999999999999999999999887764 235566667
Q ss_pred CCcEEEEeeecCCCCCC-------------------------------c--ceEEeCCCceEEEeeCCCCCCCCeEEEeE
Q psy15128 189 SGSLQIDVLRDDFRAEP-------------------------------K--DTRVASGETALLECGPPKGQPEPTLHWKK 235 (292)
Q Consensus 189 ~~~l~i~~~~~~d~g~~-------------------------------~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 235 (292)
++.|.|.++..+|+|.| . ...+.+|+.+.|.|.+ .+.|.+.+.|++
T Consensus 152 ~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~ 230 (291)
T 2wim_A 152 NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFR 230 (291)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBC-CCBSCCEEEEEE
T ss_pred CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEe-ecCCCCeEEEEE
Confidence 77899999999888822 1 2345679999999998 889999999999
Q ss_pred cCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 236 NGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
+|..+.. +.++.+... ...|.|..+..+|+|.|+|.|+|..|.++.+
T Consensus 231 ~g~~~~~--~~~~~~~~~-------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 277 (291)
T 2wim_A 231 NGKLIEE--NEKYILKGS-------NTELTVRNIINSDGGPYVCRATNKAGEDEKQ 277 (291)
T ss_dssp TTEECCC--TTTEEECST-------TCEEEEESCCSTTCEEEEEEEEETTEEEEEE
T ss_pred CCEECcC--CccEEEcCC-------ccEEEEeeCCcccCEEEEEEEEECCCceeee
Confidence 9998853 333333222 2368899999999999999999999998653
No 23
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=5.4e-35 Score=239.27 Aligned_cols=277 Identities=19% Similarity=0.208 Sum_probs=185.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+......+|+.+.|.|.+.+ .|.+ .+.|++++..
T Consensus 79 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 158 (438)
T 1qgc_4 79 IDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 158 (438)
T ss_dssp ESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEE
Confidence 7899999999999999988765444447788864 566655444444456889999999987 5666 8999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCC
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLH 151 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g 151 (292)
+... .........+...+.|.|.++..+|+|.|+|.+.|..+....... +.. ..++.....+....+.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~--~~~---~~~~~~~~~~~~~~v~~G 233 (438)
T 1qgc_4 159 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS--FNR---NECEVMLVESGGGLVKPG 233 (438)
T ss_dssp ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEE--EET---TC-CCEEEEECCEEECTT
T ss_pred cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecc--ccc---ccceeEEecCCceEEecC
Confidence 6321 000001111223458999999999999999999998776533332 221 112223334556678899
Q ss_pred CeEEEEeEeccCC--CCceEEEeC--CeeCCC----------------CCccEEEcC-----CCcEEEEeeecCCCCCC-
Q psy15128 152 SVAFLPCQAVGSP--PPHIRWYKN--GNSLPP----------------EDTRINVSS-----SGSLQIDVLRDDFRAEP- 205 (292)
Q Consensus 152 ~~v~l~C~~~~~p--~~~~~W~~~--~~~l~~----------------~~~~~~~~~-----~~~l~i~~~~~~d~g~~- 205 (292)
+.++|.|.+.+.| .+.+.|+++ +..+.. ...++.... ...|.|.++..+|+|.|
T Consensus 234 ~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 313 (438)
T 1qgc_4 234 GSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYY 313 (438)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEE
T ss_pred CcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEE
Confidence 9999999999887 578999996 443310 012333222 12688888888888722
Q ss_pred ------------------------------cce-------EEeCCCceEEEeeCCCCC-CCC-eEEEeEcCeEeccCCCc
Q psy15128 206 ------------------------------KDT-------RVASGETALLECGPPKGQ-PEP-TLHWKKNGQFIDLESSK 246 (292)
Q Consensus 206 ------------------------------~~~-------~~~~g~~~~l~C~~~~~~-p~~-~~~W~~~g~~~~~~~~~ 246 (292)
+.. .+.+|+.++|.|.+ .+. |.+ .|.|+++|.++......
T Consensus 314 C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~-~g~~P~~~~v~W~~~g~~~~~~~~~ 392 (438)
T 1qgc_4 314 CVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLV-KGYFPEPVTVTWNSGSLSSGVHTFP 392 (438)
T ss_dssp EEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEE-ESCBSSCCEEEEGGGTCCSSEEECC
T ss_pred EEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEe-ccccCCCcEEEEecCCCCCceeecC
Confidence 000 12368999999998 565 877 99999999877422111
Q ss_pred eEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 247 RVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
.+. . .+.+. ....|.|..+...| |.|+|.|.|..|...
T Consensus 393 ~~~-~-~g~~~--~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~ 430 (438)
T 1qgc_4 393 AVL-Q-SDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASSTK 430 (438)
T ss_dssp CEE-E-TTEEE--EEEEEEEEEEHHHH-SCCEEEEEEGGGTEE
T ss_pred ccc-c-CCcEE--EEEEEEEehhhcCC-ceEEEEEEeCCCCcc
Confidence 121 1 12222 22357788888888 999999999999864
No 24
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=4e-35 Score=234.25 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=177.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+ .+.|.|.. +...+ ...+.+|+.++|.|.+.+.|.+.+.|++++..+
T Consensus 71 I~~v~~~D~G~Y~C~~~n~~~-----~~~l~V~~---~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~---- 137 (363)
T 1wio_A 71 IKNLKIEDSDTYICEVEDQKE-----EVQLLVFG---LTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---- 137 (363)
T ss_dssp ECSCCGGGCEEEEEEETTEEE-----EEEEEEEE---EEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE----
T ss_pred ECCCCHHHCEEEEEEEEECCC-----cEEEEEEe---CCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc----
Confidence 689999999999999988643 26666664 22333 346789999999999988889999999987643
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
......|.|.+++.+|+|.|+|.+.+..+.......+.+.. ++.. +....+.+|+.+.|.|.+.
T Consensus 138 --------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~----~p~~----~~~~~~~~G~~v~l~C~~~ 201 (363)
T 1wio_A 138 --------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA----FQKA----SSIVYKKEGEQVEFSFPLA 201 (363)
T ss_dssp --------EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEEC----CSCS----EEEEEEETBCCEEEECCCC
T ss_pred --------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec----CCCC----CCceEEecCCEEEEEEEEe
Confidence 23456899999999999999999998755444444444432 1111 1344577899999999887
Q ss_pred c-----CCCCceEEEeCCeeCCCC-------CccEEEc-----------C--CCcEEEEeeecCCCCCCcceE-------
Q psy15128 162 G-----SPPPHIRWYKNGNSLPPE-------DTRINVS-----------S--SGSLQIDVLRDDFRAEPKDTR------- 209 (292)
Q Consensus 162 ~-----~p~~~~~W~~~~~~l~~~-------~~~~~~~-----------~--~~~l~i~~~~~~d~g~~~~~~------- 209 (292)
+ .|.+.+.|+++|..+... ...+.+. . ...|.|.++..+|+|.|....
T Consensus 202 ~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g 281 (363)
T 1wio_A 202 FTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTG 281 (363)
T ss_dssp CCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTC
T ss_pred cccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcC
Confidence 7 778899999999887762 3333331 2 338999999999999552221
Q ss_pred -----------EeCCCceEEEeeCCCCCCCCe--EEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccce
Q psy15128 210 -----------VASGETALLECGPPKGQPEPT--LHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQ 276 (292)
Q Consensus 210 -----------~~~g~~~~l~C~~~~~~p~~~--~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 276 (292)
...|+.+.|.|.+ .+.|++. +.|+++|+.+.. ...|.|..+..+|+|.
T Consensus 282 ~~~~~~~l~V~~v~g~~~~l~C~~-~g~p~p~~~i~W~~~~~~~~~------------------~~~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 282 KLHQEVNLVVMRATQLQKNLTCEV-WGPTSPKLMLSLKLENKEAKV------------------SKREKAVWVLNPEAGM 342 (363)
T ss_dssp CEEEEEEEEEEEECCCSSSEEEEE-ESSCCTTCCEEEECSSSSCSE------------------EESSSEEEESSCCSEE
T ss_pred eEEEEEeEEEEEecCCCeeEEEEE-ccccCCCccEEEEeCCCceee------------------eeeeeeeeecccccee
Confidence 1237899999998 8888887 999999987741 1146678899999999
Q ss_pred eEEEEeeccc
Q psy15128 277 WKLIAKNIRN 286 (292)
Q Consensus 277 y~C~a~n~~g 286 (292)
|+|.|+|...
T Consensus 343 Y~C~a~~~~~ 352 (363)
T 1wio_A 343 WQCLLSDSGQ 352 (363)
T ss_dssp EEEEECSSSS
T ss_pred EEEEEecCCe
Confidence 9999997543
No 25
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=4.3e-33 Score=236.01 Aligned_cols=272 Identities=20% Similarity=0.275 Sum_probs=189.4
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCC---CeeEEE-ECCe--
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPL---PSVFWT-QEGS-- 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~v~W~-~~~~-- 75 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..++ +....+.+|+.+.|.|.+ +.+. +.+.|+ +++.
T Consensus 189 I~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~-----p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~ 261 (585)
T 2ocw_A 189 INQLRLSDAGQYLCQAGDDSNSNKKN-ADLQVLKPE-----PELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENC 261 (585)
T ss_pred EccCChhHCeEEEEEeccCCccccce-EEEEEccCC-----CceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCc
Confidence 67899999999999999888776555 888887653 234457789999999997 4333 578886 7763
Q ss_pred -EEeeccCC----CcceeEEee---ec--EEEEccCCCCCCeEEEEEEEeCCcCee----EEEEEEEEeecCCCCCeEEe
Q psy15128 76 -QVLMFPGN----AYGHLHVTQ---EG--TLRIQGVQKEDAGFFVCSALSVAGSTT----VRAFLQVTSVEDTPPPIVQV 141 (292)
Q Consensus 76 -~~~~~~~~----~~~~~~~~~---~~--~l~i~~~~~~d~g~Y~C~~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~ 141 (292)
.+....+. ...+..... ++ .|.|.+++.+|+|.|+|.+.|...... ..+.|.|.. +|.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~-----~p~~~~ 336 (585)
T 2ocw_A 262 DVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNE-----ESTIPR 336 (585)
T ss_pred ceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEec-----cccccc
Confidence 22111100 112222221 23 799999999999999999998533321 555566653 444555
Q ss_pred CCCCceecCCCeEEEEeEeccCCCCce----EEEe--CCe--eCCCC--------CccEEEc---CCCc--EEEEeeecC
Q psy15128 142 GPSNQTLPLHSVAFLPCQAVGSPPPHI----RWYK--NGN--SLPPE--------DTRINVS---SSGS--LQIDVLRDD 200 (292)
Q Consensus 142 ~~~~~~~~~g~~v~l~C~~~~~p~~~~----~W~~--~~~--~l~~~--------~~~~~~~---~~~~--l~i~~~~~~ 200 (292)
.+....+.+|+.+.|.|.+.+.|.+.+ .|++ +|. .+... ..++.+. .++. |.|.++..+
T Consensus 337 ~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 416 (585)
T 2ocw_A 337 SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSR 416 (585)
T ss_pred CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChh
Confidence 567777889999999999999988876 7999 886 44321 1233332 2344 888999999
Q ss_pred CCCC----------------------------CcceEEeCCCceEEEeeCCC---CCCCCeEEEeEcCeEeccCCCce--
Q psy15128 201 FRAE----------------------------PKDTRVASGETALLECGPPK---GQPEPTLHWKKNGQFIDLESSKR-- 247 (292)
Q Consensus 201 d~g~----------------------------~~~~~~~~g~~~~l~C~~~~---~~p~~~~~W~~~g~~~~~~~~~~-- 247 (292)
|+|. +....+.+|+.+.|.|.+.. +.|.+.+.|+++|..+.......
T Consensus 417 D~G~Y~C~an~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~ 496 (585)
T 2ocw_A 417 DAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPS 496 (585)
T ss_pred hCEEEEEcccCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCC
Confidence 9982 24556789999999999831 67888999999998874322111
Q ss_pred --EEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 248 --VSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 248 --~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+...... .....|.|..+..+|+|.|+|.|.|..|...
T Consensus 497 ~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 497 KAFVNCDEN----SRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred cceEEecCc----ccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 1111110 1123699999999999999999999998654
No 26
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=8.1e-33 Score=231.23 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=180.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEE----eCCCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTV----HAPPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.|..+..... +.+.+ ..+|.+........+.+|+.+.|.|.+.+. |.+ .+.|++++.
T Consensus 182 i~~~~~~d~G~Y~C~a~n~~~~~~~~-~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~ 260 (523)
T 2rcj_C 182 LTPEQWKSHRSYSCQVTHEGSTVEKT-VAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGAL 260 (523)
T ss_pred EechhcCCCceEEEEEEecCcccccc-eeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCc
Confidence 66788899999999999987765444 44322 235555544444456789999999999886 777 899999987
Q ss_pred EEeeccCCC--cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCce-ecCCC
Q psy15128 76 QVLMFPGNA--YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQT-LPLHS 152 (292)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~-~~~g~ 152 (292)
.+....... .........+.|.|.++..+| |.|+|.|.|..+.......+.+.. .+.+....+.... +.+|+
T Consensus 261 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~----~P~~~~~~p~~~~~v~~g~ 335 (523)
T 2rcj_C 261 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLS----LPSVFLFPPKPKDTLMISR 335 (523)
T ss_pred ccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCc----CceEEecCCCchhhcccCC
Confidence 542111000 000111224589999999999 999999999988766555554431 2333334444343 78899
Q ss_pred eEEEEeEeccCCC----CceEEEeCCeeCCCCCccE-EEcCCC------cEEEEeeecCCCCCC----------------
Q psy15128 153 VAFLPCQAVGSPP----PHIRWYKNGNSLPPEDTRI-NVSSSG------SLQIDVLRDDFRAEP---------------- 205 (292)
Q Consensus 153 ~v~l~C~~~~~p~----~~~~W~~~~~~l~~~~~~~-~~~~~~------~l~i~~~~~~d~g~~---------------- 205 (292)
.+.|.|.+.+.|+ +.+.|+|+|.++....... ....++ .|.|..+..+|+|.|
T Consensus 336 ~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 415 (523)
T 2rcj_C 336 TPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKT 415 (523)
T ss_pred ceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEE
Confidence 9999999988643 4899999999886543211 112222 366666667777722
Q ss_pred ----------cceEE-------eCCCceEEEeeCCCCCCCC--eEEEeEcCeEeccCCCceEEecCCCcccccccccccc
Q psy15128 206 ----------KDTRV-------ASGETALLECGPPKGQPEP--TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFG 266 (292)
Q Consensus 206 ----------~~~~~-------~~g~~~~l~C~~~~~~p~~--~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 266 (292)
+...+ ..|..++|.|.+ .|.|++ .+.|+++|+++............++.+.. ...|.+
T Consensus 416 ~~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~-~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~--~~~l~v 492 (523)
T 2rcj_C 416 ISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLV-KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL--YSKLTV 492 (523)
T ss_pred EEcccCCCCCCEEEEeCCChHHccCCceEEEEEE-EeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEE--EEEEEE
Confidence 11111 124559999998 665544 99999999998633222333344443331 123444
Q ss_pred ccccccccceeEEEEeeccccc
Q psy15128 267 SVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 267 ~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
......|.|.|+|.|.|.....
T Consensus 493 ~~~~~~~~g~Y~C~a~n~~l~~ 514 (523)
T 2rcj_C 493 DKSRWQQGNVFSCSVMHEALHN 514 (523)
T ss_pred ChHHccCCCeEEEEEEcCCcCC
Confidence 4555577999999999987543
No 27
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=5.7e-32 Score=229.12 Aligned_cols=271 Identities=18% Similarity=0.261 Sum_probs=192.0
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEee-
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVLM- 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~- 79 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+....+.+|+.+.|.|.+.+. +.+.+.|++++.....
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~-~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~ 157 (585)
T 2ocw_A 79 IAQLSQDDSGRYKCGLGINSRGLSFD-VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL 157 (585)
T ss_pred ECCCCcccCEEEEEEcccCCCCceEE-EEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceE
Confidence 78999999999999999887776555 89999999998888888899999999999999865 4568999998754211
Q ss_pred -ccC------CCcceeEEeeec------EEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCc
Q psy15128 80 -FPG------NAYGHLHVTQEG------TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQ 146 (292)
Q Consensus 80 -~~~------~~~~~~~~~~~~------~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~ 146 (292)
... ....+..+..++ .|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. ++ |...
T Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----~~------p~~~ 227 (585)
T 2ocw_A 158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLK----PE------PELV 227 (585)
T ss_pred EecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEcc----CC------Ccee
Confidence 010 001222332222 799999999999999999999888777677776653 11 2334
Q ss_pred eecCCCeEEEEeEeccCCC---CceEEE-eCCeeCC---C--------CCccEEEc---CCC--cEEEEeeecCCCCCC-
Q psy15128 147 TLPLHSVAFLPCQAVGSPP---PHIRWY-KNGNSLP---P--------EDTRINVS---SSG--SLQIDVLRDDFRAEP- 205 (292)
Q Consensus 147 ~~~~g~~v~l~C~~~~~p~---~~~~W~-~~~~~l~---~--------~~~~~~~~---~~~--~l~i~~~~~~d~g~~- 205 (292)
.+.+|+.+.|.|.+ +.+. +.+.|+ +++.... . ...++.+. .++ .|.|.++..+|+|.|
T Consensus 228 ~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~ 306 (585)
T 2ocw_A 228 YEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYL 306 (585)
T ss_pred EEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEE
Confidence 57799999999997 4433 578886 7773211 1 11233332 144 689999999998822
Q ss_pred --------------------------------cceEEeCCCceEEEeeCCCCCCCCeE----EEeE--cCe--EeccCC-
Q psy15128 206 --------------------------------KDTRVASGETALLECGPPKGQPEPTL----HWKK--NGQ--FIDLES- 244 (292)
Q Consensus 206 --------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~----~W~~--~g~--~~~~~~- 244 (292)
....+.+|+.+.|.|.+ .+.|.+.+ .|++ +|. .+....
T Consensus 307 C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~-~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~ 385 (585)
T 2ocw_A 307 CGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPY-NRKESKSIKYWCLWEGAQNGRCPLLVDSEG 385 (585)
T ss_pred EEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEec-CCCCCccEEEEEEEEccCCCCCceeeeecc
Confidence 34456789999999998 88888876 7999 887 553211
Q ss_pred ------CceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 245 ------SKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 245 ------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
..++.+..+. ......|.|..+..+|+|.|+|+| |..|..+
T Consensus 386 ~~~~~~~~r~~~~~~~---~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~ 432 (585)
T 2ocw_A 386 WVKAQYEGRLSLLEEP---GNGTFTVILNQLTSRDAGFYWCLT-NGDTLWR 432 (585)
T ss_pred eeecccCCCEEEeccC---CCcEEEEEECCCChhhCEEEEEcc-cCCCccc
Confidence 1222222110 011124889999999999999999 9888764
No 28
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-31 Score=214.27 Aligned_cols=240 Identities=25% Similarity=0.423 Sum_probs=180.5
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEee-eCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccC-----CCCCCeE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEG-SPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGV-----QKEDAGF 108 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-----~~~d~g~ 108 (292)
....+...|....+.+|+.++|.|.+.+ .|.+.+.|+|++..+... ...+.....++.|.|.++ +.+|+|.
T Consensus 20 ~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~---~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~ 96 (403)
T 3laf_A 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALG---MDDRKQQLPNGSLLIQNILHSRHHKPDEGL 96 (403)
T ss_dssp CSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTT---SCTTEEECTTSCEEECSCCCBTTBCSSCEE
T ss_pred eeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccC---CcccEEEecCCcEEEeeeeccCCCCCcceE
Confidence 3456677888899999999999999987 577789999999876321 123344445667888777 6779999
Q ss_pred EEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCC--CCccEEE
Q psy15128 109 FVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPP--EDTRINV 186 (292)
Q Consensus 109 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~--~~~~~~~ 186 (292)
|+|.+.+..+.......+.+.+ ..++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...+...
T Consensus 97 Y~C~~~~~~~~~~~s~~~~l~v---~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 173 (403)
T 3laf_A 97 YQCEASLGDSGSIISRTAKVMV---AGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV 173 (403)
T ss_dssp EEEEEECGGGCEEECCCEEEEE---CCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE
T ss_pred EEEEEEeCCCccEEEEEEEEEe---cCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE
Confidence 9999986544443333333332 2255666667777889999999999999999999999999988753 2245556
Q ss_pred cCCCcEEEEeeecCCCCCC------------------------------------cceEEeCCCceEEEeeCCCCCCCCe
Q psy15128 187 SSSGSLQIDVLRDDFRAEP------------------------------------KDTRVASGETALLECGPPKGQPEPT 230 (292)
Q Consensus 187 ~~~~~l~i~~~~~~d~g~~------------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~ 230 (292)
...+.|.|.++..+|+|.| ....+.+|+.+.|.|.+ .+.|.+.
T Consensus 174 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~ 252 (403)
T 3laf_A 174 LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-SGYPPPS 252 (403)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-EEESCCE
T ss_pred cCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-CCCCCCe
Confidence 6677899999999998811 23456789999999998 7889999
Q ss_pred EEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 231 LHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 231 ~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
+.|++++..+.... .+.....+ ..|.|..+..+|+|.|+|.|.|..|..+.
T Consensus 253 ~~W~~~~~~~~~~~-~~~~~~~~--------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 303 (403)
T 3laf_A 253 FTWLRGEEVIQLRS-KKYSLLGG--------SNLLISNVTDDDSGTYTCVVTYKNENISA 303 (403)
T ss_dssp EEEEETTEECCCSS-SSEEEETT--------TEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEECCeeccCCC-ceEEECCc--------cEEEEeCCCHHHCEEEEEEEEcCCCceEE
Confidence 99999999885322 22222222 25889999999999999999999987654
No 29
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=2e-32 Score=224.37 Aligned_cols=282 Identities=15% Similarity=0.141 Sum_probs=177.6
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 162 (444)
T 1igt_B 83 MSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 162 (444)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecC
Confidence 7899999999999999986543 222337788873 3544433323335789999999999885 766 9999998
Q ss_pred CeEEeeccCCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe-------------ecCCCCCeE
Q psy15128 74 GSQVLMFPGNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS-------------VEDTPPPIV 139 (292)
Q Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~-------------~~~~~~~~~ 139 (292)
+..+....... .........+.|.|.++..+| |.|+|.+.|..+.......+.+.. .....+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v 241 (444)
T 1igt_B 163 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSV 241 (444)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEE
T ss_pred CCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceE
Confidence 86521110000 000112234579999999999 999999999888765444443210 011113443
Q ss_pred -EeCCCCce-ecCCCeEEEEeEeccCC----CCceEEEeCCeeCCCCCcc-EEEcC------CCcEEEEeeecCCCCCC-
Q psy15128 140 -QVGPSNQT-LPLHSVAFLPCQAVGSP----PPHIRWYKNGNSLPPEDTR-INVSS------SGSLQIDVLRDDFRAEP- 205 (292)
Q Consensus 140 -~~~~~~~~-~~~g~~v~l~C~~~~~p----~~~~~W~~~~~~l~~~~~~-~~~~~------~~~l~i~~~~~~d~g~~- 205 (292)
...+.... +.+|+.++|.|.+.+.+ .+.+.|++++..+...... ..... .+.|.|.++..+|+|.|
T Consensus 242 ~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 321 (444)
T 1igt_B 242 FIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFK 321 (444)
T ss_dssp EEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEE
T ss_pred EecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEE
Confidence 33333333 58899999999998874 3589999999887543211 11111 23577777777777721
Q ss_pred -------------------------cceEEe-------CCCceEEEeeCCCC-CCCC-eEEEeEcCeEeccCCCceEEec
Q psy15128 206 -------------------------KDTRVA-------SGETALLECGPPKG-QPEP-TLHWKKNGQFIDLESSKRVSIL 251 (292)
Q Consensus 206 -------------------------~~~~~~-------~g~~~~l~C~~~~~-~p~~-~~~W~~~g~~~~~~~~~~~~~~ 251 (292)
+.+.+. .+..++|.|.+ .| +|++ .|.|+++|.++...........
T Consensus 322 C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 400 (444)
T 1igt_B 322 CKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMV-TDFMPEDIYVEWTNNGKTELNYKNTEPVLD 400 (444)
T ss_dssp EEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEE-EEEBSSCCEEEEEETTEECSSEEECCCEEC
T ss_pred EEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEE-EeeeCCCCEEEEEECCEEccccccccceeC
Confidence 111111 23459999998 56 6665 9999999998832111122223
Q ss_pred CCCccccccccccccccccccccceeEEEEeecccc
Q psy15128 252 GDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 252 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
.++.+.. ...|.+.....+|.|.|+|.|.|..-.
T Consensus 401 ~~g~~~~--~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 401 SDGSYFM--YSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp TTSCEEE--EEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred CCCCEEE--EEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 3443322 124555666667799999999998643
No 30
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3.9e-31 Score=217.12 Aligned_cols=249 Identities=16% Similarity=0.211 Sum_probs=164.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEE-eCCCccEEecCCcEEEEEEEeeeCCC---eeEEEECCeEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFV-VRPQDQKVGLNGIASFQCVAEGSPLP---SVFWTQEGSQV 77 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~ 77 (292)
|.+++. |+| |+|.+.+..+..... +.|.|..+|.+. ..+....+.+|+.+.|.|.+.+.|++ .|.|+|++..+
T Consensus 54 i~~v~~-d~g-Y~C~a~~~~~~~~~~-~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l 130 (450)
T 1z7z_I 54 LSNVQE-DSQ-PMCYSNCPDGQSTAK-TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKEL 130 (450)
T ss_dssp EEEECS-CBC-CEEEEEETTEEEEEE-CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEE
T ss_pred EEeccc-CCe-eEEEEeCCCCcceeE-EEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEe
Confidence 567777 999 999997554444444 888888887766 56677889999999999999998877 89999999877
Q ss_pred eeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee--------EEEEEEEEeecCCCCCeEEeCCCCceec
Q psy15128 78 LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT--------VRAFLQVTSVEDTPPPIVQVGPSNQTLP 149 (292)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~--------~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 149 (292)
....... ....+.|.|.++..+|+|.|+|.+.|..+... ....+.+... ...+|.+.. ...+.
T Consensus 131 ~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~~~~p~~~~---~~~v~ 201 (450)
T 1z7z_I 131 KREPAVG-----EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-PATPPQLVS---PRVLE 201 (450)
T ss_dssp EEEECCT-----TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-CSSCCEEEC---CSEEE
T ss_pred ecccccc-----cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-CCCCCEecC---ceeEE
Confidence 5332111 12245899999999999999999998866422 1122333211 012233322 15688
Q ss_pred CCCeEEEEeEeccC-C--CCceEEEeCCeeCCCCCccEEEcCCCcEEEE---eeecCCCC--CC----------------
Q psy15128 150 LHSVAFLPCQAVGS-P--PPHIRWYKNGNSLPPEDTRINVSSSGSLQID---VLRDDFRA--EP---------------- 205 (292)
Q Consensus 150 ~g~~v~l~C~~~~~-p--~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~---~~~~~d~g--~~---------------- 205 (292)
+|+.+.|.|.+.+. | .+.+.|++++..+.. .+....+ .+.+. ++..+|+| .|
T Consensus 202 ~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~---~~~~~~~-~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~ 277 (450)
T 1z7z_I 202 VDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGND-SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 277 (450)
T ss_dssp TTSEEEEEEEEESCTTGGGCEEEEEETTEECCC---EEEEETT-EEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred eCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc---eEEecCC-ceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEE
Confidence 99999999999888 6 678999999998865 2222222 22222 45667777 22
Q ss_pred -------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccccccc
Q psy15128 206 -------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGAL 272 (292)
Q Consensus 206 -------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 272 (292)
....+.+|+.++|.|.+ . |.+.+.| +|.++.. .+ ....|.|..+..+
T Consensus 278 l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~-~--p~p~i~W--~g~~~~~-~~--------------~~~~L~i~~~~~~ 337 (450)
T 1z7z_I 278 VTIYSFPAPNVILTKPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQP-LG--------------PRAQLLLKATPED 337 (450)
T ss_dssp EEEECCCCCEEEESCSEEETTCEEEEEEEC----------------------C--------------CCCCEEEECCGGG
T ss_pred EEEecCCCCeEecCCeeEeCCCcEEEEEec-C--CCCEeEE--CCEEcCC-CC--------------ceEEEEEecCccc
Confidence 12357789999999998 4 8899999 7777621 11 1125888999999
Q ss_pred ccceeEEEEeeccc
Q psy15128 273 SDDQWKLIAKNIRN 286 (292)
Q Consensus 273 ~~g~y~C~a~n~~g 286 (292)
|+|.|+|.|.|..|
T Consensus 338 d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 338 NGRSFSCSATLEVA 351 (450)
T ss_dssp TTCEEEEEEEEEET
T ss_pred CCceEEEEEEcCCC
Confidence 99999999998766
No 31
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=6.5e-33 Score=217.45 Aligned_cols=237 Identities=17% Similarity=0.218 Sum_probs=167.2
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
+|.+.. +....+.+|+.++|.|.+.+. |.+.+.|++++..+.... .. ........|.|.+++.+|+|.|+|.+.
T Consensus 7 ~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~--~~--~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 7 GPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE--KH--DFKDGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp CCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSC--C-------CCEEEEETTCCSTTCSCEEEEEE
T ss_pred CCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCC--cE--EEECCeEEEEEccCCcccCeEEEEEEE
Confidence 555553 335788999999999999887 778999999998764211 11 111334689999999999999999999
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc----------CCCCceEEEeCCeeCCCCCccE
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG----------SPPPHIRWYKNGNSLPPEDTRI 184 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~----------~p~~~~~W~~~~~~l~~~~~~~ 184 (292)
+..+.......+.+.. .+.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+.... ++
T Consensus 82 n~~g~~~~~~~l~v~~-----~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~-~~ 155 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEA-----FKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD-RV 155 (317)
T ss_dssp SSSCEEEEEECCSTHH-----HHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCS-SE
T ss_pred CCCCcEEEEEEEEEec-----CccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCC-Ce
Confidence 8877654443333221 111111112233456666777776655 6888999999999887643 33
Q ss_pred EEcCCC---cEEEEeeecCCCCCC--------------------------------------------------cceEEe
Q psy15128 185 NVSSSG---SLQIDVLRDDFRAEP--------------------------------------------------KDTRVA 211 (292)
Q Consensus 185 ~~~~~~---~l~i~~~~~~d~g~~--------------------------------------------------~~~~~~ 211 (292)
.....+ .|.|.++..+|+|.| ....+.
T Consensus 156 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 235 (317)
T 2y25_A 156 KTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQ 235 (317)
T ss_dssp EEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEE
T ss_pred EEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEE
Confidence 332222 499999999999822 135788
Q ss_pred CCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 212 SGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 212 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
+|+.+.|.|.+ .+.|.+.+.|+++|..+.. +.++.+.... .....|.|..+...|+|.|+|.|.|..|..+.
T Consensus 236 ~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~--~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 307 (317)
T 2y25_A 236 EGKALNLTCNV-WGDPPPEVSWLKNEKALAS--DDHCNLKFEA----GRTAYFTINGVSTADSGKYGLVVKNKYGSETS 307 (317)
T ss_dssp TTSBBCEEEEE-ECSSCCEEEEEESSSEECC--CSSEEECCBT----TTEEEEEEBSCCSTTCEEEEEEEEETTEEEEE
T ss_pred cCCEEEEEEEE-ecCCCCEEEEEECCEeCCC--CCcEEEEEcC----CCEEEEEECCCCHHHCEEEEEEEEeCCCeEEE
Confidence 99999999998 8999999999999999863 3344333221 01236889999999999999999999998764
No 32
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=6.8e-32 Score=218.02 Aligned_cols=245 Identities=19% Similarity=0.247 Sum_probs=180.0
Q ss_pred EEEeCCCcEEeCCCccEEecCCcEEEEEEEee-eCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEE
Q psy15128 31 LTVHAPPSFVVRPQDQKVGLNGIASFQCVAEG-SPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFF 109 (292)
Q Consensus 31 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y 109 (292)
|.|..+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|++++..+..... .......++.|.|.+++.+|+|.|
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~---~~~~~~~~~~L~i~~~~~~D~G~Y 77 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEH---NAALRKDEGSLVFLRPQASDEGHY 77 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTT---TEEECTTSCCEEESSCCGGGCEEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccc---eEEEecCCceEEEecCCCCCCcEE
Confidence 45778899988888899999999999999998 78889999999876632211 122233456899999999999999
Q ss_pred EEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCC---eeCCCC---C
Q psy15128 110 VCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNG---NSLPPE---D 181 (292)
Q Consensus 110 ~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~---~~l~~~---~ 181 (292)
+|.+.|..+... ..+.+.+..... +.. .+....+.+|+.+.|.|.+ .+.|.+.+.|++++ .+.... .
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~--p~~---~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 152 (395)
T 1bih_A 78 QCFAETPAGVASSRVISFRKTYLIA--SPA---KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFD 152 (395)
T ss_dssp EEEEEETTEEEECCCEEEEEEEEEC--CCC---EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCC
T ss_pred EEEEEeCCCeEEeEEEEEEEEEeec--CCc---CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCccccccccc
Confidence 999999776543 224444443221 211 1234456799999999996 78889999999986 222111 3
Q ss_pred ccEEEcCCCcEEEEeeecCCCC---CC----------------------------------------cceEEeCCCceEE
Q psy15128 182 TRINVSSSGSLQIDVLRDDFRA---EP----------------------------------------KDTRVASGETALL 218 (292)
Q Consensus 182 ~~~~~~~~~~l~i~~~~~~d~g---~~----------------------------------------~~~~~~~g~~~~l 218 (292)
.++....++.|.|.++..+|+| .| ....+.+|+.+.|
T Consensus 153 ~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l 232 (395)
T 1bih_A 153 RRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMI 232 (395)
T ss_dssp TTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEE
T ss_pred ccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEE
Confidence 4566677889999999999998 33 1345778999999
Q ss_pred EeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 219 ECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 219 ~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
.|.+ .+.|.+.+.|+++|..+......++..... .....|.|..+...|+|.|+|.|.|..|...
T Consensus 233 ~C~~-~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 233 YCMY-GSNPMGYPNYFKNGKDVNGNPEDRITRHNR-----TSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp EEEE-ECSSCCCCEEEETTEECCCCTTSSEESCSS-----STTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred EEEe-ccCCCCeEEEEECCEEcCCCCceeEEEEec-----CCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 9998 899999999999999886444444432111 1123688999999999999999999999853
No 33
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.98 E-value=6.1e-31 Score=215.98 Aligned_cols=242 Identities=16% Similarity=0.237 Sum_probs=163.7
Q ss_pred cccCCcCCCeeEEEEEEeccccccc-------ccEEEEEeCC----CcEEeCCCccEEecCCcEEEEEEEeee-C--CCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERET-------KPALLTVHAP----PSFVVRPQDQKVGLNGIASFQCVAEGS-P--LPS 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~-------~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~-~--~~~ 67 (292)
|.+++.+|+|.|+|.+.|..|.... ....|.|... |.+. ....+.+|+.+.|.|.+.+. | .+.
T Consensus 146 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~---~~~~v~~G~~v~l~C~~~g~~P~~~~~ 222 (450)
T 1z7z_I 146 VLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLV---SPRVLEVDTQGTVVCSLDGLFPVSEAQ 222 (450)
T ss_dssp EECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEE---CCSEEETTSEEEEEEEEESCTTGGGCE
T ss_pred EEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEec---CceeEEeCCcEEEEEEeeCCCCCCceE
Confidence 6788999999999999998764332 2245555533 2221 12678899999999999987 6 679
Q ss_pred eEEEECCeEEeeccCCCcceeEEeeec---EEEEccCCCCCCe--EEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeC
Q psy15128 68 VFWTQEGSQVLMFPGNAYGHLHVTQEG---TLRIQGVQKEDAG--FFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVG 142 (292)
Q Consensus 68 v~W~~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g--~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 142 (292)
+.|++++..+.. ......+. .+.+ +++.+|.| .|+|.+.|..+.......|.|.. .++|.+...
T Consensus 223 ~~W~~~~~~~~~-------~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~---~~~p~i~~~ 291 (450)
T 1z7z_I 223 VHLALGDQRLNP-------TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS---FPAPNVILT 291 (450)
T ss_dssp EEEEETTEECCC-------EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEEC---CCCCEEEES
T ss_pred EEEeCCCEeCCc-------eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEec---CCCCeEecC
Confidence 999999987631 11111111 1222 77899999 99999999888777777777764 234555543
Q ss_pred CCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCC-------------------
Q psy15128 143 PSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRA------------------- 203 (292)
Q Consensus 143 ~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g------------------- 203 (292)
...+.+|+.++|.|.+. |.+.+.| +|.++.... ....|.|..+..+|+|
T Consensus 292 --~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~ 359 (450)
T 1z7z_I 292 --KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ 359 (450)
T ss_dssp --CSEEETTCEEEEEEEC--------------------C------CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEE
T ss_pred --CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCC------ceEEEEEecCcccCCceEEEEEEcCCCCcccccce
Confidence 44788999999999997 8889999 777762211 2236777777777777
Q ss_pred ----------------CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccc
Q psy15128 204 ----------------EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGS 267 (292)
Q Consensus 204 ----------------~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 267 (292)
.+....+.+|+.+.|.|.+ .|.|.|.+.|+++|..+.. .+. .+
T Consensus 360 ~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~-~g~P~p~i~W~~~g~~~~~----------~g~-------~~--- 418 (450)
T 1z7z_I 360 TRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA-WGNPLPELKCLKDGTFPLP----------IGE-------SV--- 418 (450)
T ss_dssp EEECEEEEEEECCSTTSCSEEEEETTCEECCCCCC-EEESCCEEEEEETTTEECC----------TTS-------CE---
T ss_pred eEEEEEecCCceeeccCCCceeEcCCCeEEEEEec-ccCCCCcEEEEECCcccCC----------CCC-------eE---
Confidence 1245578899999999998 8999999999999874421 110 11
Q ss_pred cccccccceeEEEEeeccccccc
Q psy15128 268 VLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 268 ~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.+..+|+|.|+|.|.|.+|.++.
T Consensus 419 ~v~~~d~G~Y~C~a~N~~G~~~~ 441 (450)
T 1z7z_I 419 TVTRDLEGTYLCRARSTQGEVTR 441 (450)
T ss_dssp ECCGGGCEEEEEEEEETTEEEEE
T ss_pred eEehhhCeEEEEEEEeCCCceeE
Confidence 46678999999999999999865
No 34
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.98 E-value=8.6e-33 Score=218.80 Aligned_cols=251 Identities=16% Similarity=0.160 Sum_probs=180.3
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEe-------eeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCC
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAE-------GSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDA 106 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~-------~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 106 (292)
...|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ...+. ...++.|.|.+++.+|+
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~-~~~~~-~~~~~~L~i~~v~~~D~ 93 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGE-EETRM-WAQDGALWLLPALQEDS 93 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCC-SSSCE-EEETTEEEESSBCTTCC
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCcc-ccccE-EeeCCeEEECCCCcccC
Confidence 3467788888889999999999999997 778889999999876432221 12222 24467899999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeE-----eccCCCCceEEEeCCeeCCCCC
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQ-----AVGSPPPHIRWYKNGNSLPPED 181 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~-----~~~~p~~~~~W~~~~~~l~~~~ 181 (292)
|.|+|.+.+..+.......|.|.... ............+.+|+.+.|.|. +.+.|.+.+.|++++..+....
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~---~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~ 170 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENT---DAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDN 170 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSC---GGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTC
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCC---CccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCC
Confidence 99999999988766666666665321 111011112235789999999999 7788899999999999988765
Q ss_pred ccEEEcCC-CcEEEEeeecCCCCCC--------------------------------------cceEEeCCCceEEEeeC
Q psy15128 182 TRINVSSS-GSLQIDVLRDDFRAEP--------------------------------------KDTRVASGETALLECGP 222 (292)
Q Consensus 182 ~~~~~~~~-~~l~i~~~~~~d~g~~--------------------------------------~~~~~~~g~~~~l~C~~ 222 (292)
.++..... +.|.|.++..+|+|.| ....+.+|+.+.|.|.+
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~ 250 (339)
T 3o4o_C 171 EKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKV 250 (339)
T ss_dssp SSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCE
T ss_pred ceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEE
Confidence 55555444 4799999888888821 22245679999999997
Q ss_pred C--CCCC-CCeEEEeEcCeEeccCCC-------ceEEecCCCcccccccccccccccccccc-ceeEEEEeecccccccC
Q psy15128 223 P--KGQP-EPTLHWKKNGQFIDLESS-------KRVSILGDPWFDSRRSRSIFGSVLGALSD-DQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 223 ~--~~~p-~~~~~W~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~-g~y~C~a~n~~g~~~~~ 291 (292)
. .+.| .+.+.|+++|..+..... .++....++... ....|.|..+..+|. |.|+|.|+|.+|+++..
T Consensus 251 ~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~ 328 (339)
T 3o4o_C 251 FLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY--IEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLR 328 (339)
T ss_dssp EESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCE--EEECCEECSSCCCSCCCCCEEEEEETTEEECCB
T ss_pred ECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceE--EEEEEEEEEechhhcCccEEEEEEeccCceEEE
Confidence 3 5667 889999999987742211 112222221110 112688999999997 99999999999998764
No 35
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.98 E-value=6.4e-32 Score=222.11 Aligned_cols=281 Identities=15% Similarity=0.192 Sum_probs=172.8
Q ss_pred cccCCcCCCeeEEEEEEeccc---------c--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG---------E--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PL 65 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~---------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~ 65 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 83 LRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp ECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred ECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 789999999999999998764 1 222337788865 4555444434456789999999999886 64
Q ss_pred -CeeEEEECCeEEeec--cC--CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeec--------
Q psy15128 66 -PSVFWTQEGSQVLMF--PG--NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVE-------- 132 (292)
Q Consensus 66 -~~v~W~~~~~~~~~~--~~--~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~-------- 132 (292)
+.+.|++++..+... .. ...+. ......|.|.++..+| |.|+|.+.|..+.......+.+....
T Consensus 163 ~~~v~W~k~~~~~~~~~~~~~~~~~~~--~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~ 239 (457)
T 1hzh_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGL--YSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPC 239 (457)
T ss_dssp CCEEEETTTTBCTTEEEEEEEECTTSC--EEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSC
T ss_pred CeEEEEEeCCEeccceEcCceECCCCC--EEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCC
Confidence 789999988532100 00 00111 1223479999999999 99999999977665544433322100
Q ss_pred ----CCCCCeE-EeCCCCce-ecCCCeEEEEeEeccCCCC----ceEEEeCCeeCCCCCcc-EEEcCCCcEEEEeee---
Q psy15128 133 ----DTPPPIV-QVGPSNQT-LPLHSVAFLPCQAVGSPPP----HIRWYKNGNSLPPEDTR-INVSSSGSLQIDVLR--- 198 (292)
Q Consensus 133 ----~~~~~~~-~~~~~~~~-~~~g~~v~l~C~~~~~p~~----~~~W~~~~~~l~~~~~~-~~~~~~~~l~i~~~~--- 198 (292)
...+|.+ ...+.... +.+|+.++|.|.+.+.|++ .+.|++++.++...... .....++.|.+....
T Consensus 240 ~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~ 319 (457)
T 1hzh_H 240 PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVL 319 (457)
T ss_dssp CCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCC
T ss_pred CCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEEC
Confidence 0112333 33333332 5689999999999887543 89999999887542211 112234455444322
Q ss_pred cCC---CCCC--------------------------cceEEe-------CCCceEEEeeCCCCC-CC-CeEEEeEcCeEe
Q psy15128 199 DDF---RAEP--------------------------KDTRVA-------SGETALLECGPPKGQ-PE-PTLHWKKNGQFI 240 (292)
Q Consensus 199 ~~d---~g~~--------------------------~~~~~~-------~g~~~~l~C~~~~~~-p~-~~~~W~~~g~~~ 240 (292)
..| +|.| +.+.+. .+..+.|.|.+ .|. |+ +.|.|+++|+++
T Consensus 320 ~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~-~g~~p~~~~v~W~k~g~~l 398 (457)
T 1hzh_H 320 HQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLV-KGFYPSDIAVEWESNGQPE 398 (457)
T ss_dssp HHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEE-EEEBSSCCEEEEEETTEEC
T ss_pred HHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEE-EeEECCCCEEEEEECCEEC
Confidence 223 4411 111111 23349999998 664 43 399999999988
Q ss_pred ccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 241 DLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
............++.+.. ...|.+......|.|.|+|.|+|.....
T Consensus 399 ~~~~~~~~~~~~~g~~~~--~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 399 NNYKTTPPVLDSDGSFFL--YSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp CCEEECCCEECTTSCEEE--EEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred cceeecCceeCCCCCEEE--EEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 532222233334443332 1234455555578999999999986543
No 36
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.98 E-value=2.5e-31 Score=205.73 Aligned_cols=234 Identities=15% Similarity=0.165 Sum_probs=168.1
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.++|.|.+.+ .+.|++++..... .........|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~-------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 72 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWT-------LDPESPGSTLTTRNATFKNTGTYRCTELE 72 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSE-------ECCCSSCCEEEESSCCGGGCEEEEEECCC
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEE-------EeccCCccEEEEeeeccccCEEEEEEEec
Confidence 455555666778899999999999876 5999977643210 01112346899999999999999999988
Q ss_pred CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCc-eEEEe-CCeeCCCCCccEEEcCCCcEE
Q psy15128 116 VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPH-IRWYK-NGNSLPPEDTRINVSSSGSLQ 193 (292)
Q Consensus 116 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~-~~W~~-~~~~l~~~~~~~~~~~~~~l~ 193 (292)
..+.......|.|.. ++..+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+.. ..++....++.|.
T Consensus 73 ~~~~~~~~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~L~ 147 (289)
T 3ejj_X 73 DPMAGSTTIHLYVKD----PAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR-KTVYFFSPWRGFI 147 (289)
T ss_dssp -----CEEEEEEECC----SSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT-TCCEEEETTTEEE
T ss_pred cCCcceeEEEEEEeC----CCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC-CccEEECCCCCEE
Confidence 777666666666653 233355566777889999999999998876665 99986 5666554 3556666777899
Q ss_pred EEeeecCCCCCC----------------------------------cceEEeCCCceEEEeeCCCC-CCCCeEEEeEcCe
Q psy15128 194 IDVLRDDFRAEP----------------------------------KDTRVASGETALLECGPPKG-QPEPTLHWKKNGQ 238 (292)
Q Consensus 194 i~~~~~~d~g~~----------------------------------~~~~~~~g~~~~l~C~~~~~-~p~~~~~W~~~g~ 238 (292)
|.++..+|+|.| ....+.+|+.+.|.|.+ .+ .|.+.+.|+++|.
T Consensus 148 i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~-~~~~p~~~i~W~~~~~ 226 (289)
T 3ejj_X 148 IRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSA-TNAEVGFNVILKRGDT 226 (289)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEE-EESSSCCEEEEEETTE
T ss_pred EeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEe-CCCCCceEEEEEECCE
Confidence 999999888821 22334589999999998 55 8999999999999
Q ss_pred EeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 239 FIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
.+.. ........... .....|.|..+..+|+|.|+|.|+|..|+++.+
T Consensus 227 ~~~~--~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s 274 (289)
T 3ejj_X 227 KLEI--PLNSDFQDNYY---KKVRALSLNAVDFQDAGIYSCVASNDVGTRTAT 274 (289)
T ss_dssp ECCC--CEEEEECSSSE---EEEEEEEESSCCSSSCEEEEEEEECSSCEEEEE
T ss_pred Eeec--cCCcccccceE---EeeEEEEEEeecccCCEEEEEEEEcCCCCcccc
Confidence 8852 22222111111 123368899999999999999999999998764
No 37
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.98 E-value=3.6e-31 Score=214.40 Aligned_cols=243 Identities=22% Similarity=0.319 Sum_probs=177.7
Q ss_pred EEEeCCCcEEe-CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEc----cCCCCC
Q psy15128 31 LTVHAPPSFVV-RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQ----GVQKED 105 (292)
Q Consensus 31 l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~----~~~~~d 105 (292)
..+..+|.+.. .+....+.+|+.++|.|.+.|.|.+.+.|+|++..+........ .....++.|.|. +++.+|
T Consensus 11 ~~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~--~~~~~~~~l~i~~~~~~~~~~D 88 (404)
T 3p3y_A 11 NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRV--SMRRRSGTLVIDFRSGGRPEEY 88 (404)
T ss_dssp --CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSC--BCCSSSCCCBCCCTTTCCTTSS
T ss_pred hhccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcc--eEecCCceEEEEeccCCCCccC
Confidence 34456777775 45677899999999999999999999999999987643222111 111234455554 788899
Q ss_pred CeEEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCCeeCCCCCcc
Q psy15128 106 AGFFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNGNSLPPEDTR 183 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~ 183 (292)
+|.|+|.+.|..+... ..+.|.|.. ++......+....+.+|+.+.|.|.+ .+.|.+.+.|++++........+
T Consensus 89 ~G~Y~C~a~n~~g~~~s~~~~l~V~~----~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~ 164 (404)
T 3p3y_A 89 EGEYQCFARNKFGTALSNRIRLQVSK----SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKR 164 (404)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECC----CCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSS
T ss_pred CEEEEEEEEcCCCeEeeeeEEEEEec----cCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCc
Confidence 9999999999877653 344555542 22222233345678899999999998 77888999999988665555567
Q ss_pred EEEcCCCcEEEEeeecCC-CCCC------------------------------------------cceEEeCCCceEEEe
Q psy15128 184 INVSSSGSLQIDVLRDDF-RAEP------------------------------------------KDTRVASGETALLEC 220 (292)
Q Consensus 184 ~~~~~~~~l~i~~~~~~d-~g~~------------------------------------------~~~~~~~g~~~~l~C 220 (292)
+....++.|.|.++..+| +|.| ....+.+|+.+.|.|
T Consensus 165 ~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C 244 (404)
T 3p3y_A 165 VSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 244 (404)
T ss_dssp EEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEEC
T ss_pred EEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEE
Confidence 777778899999999998 4722 123477899999999
Q ss_pred eCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 221 GPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 221 ~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.+ .+.|.+.+.|+++|..+... ...... ....|.|..+..+|+|.|+|.|.|..|..+.
T Consensus 245 ~~-~g~p~~~v~W~~~~~~~~~~--~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 303 (404)
T 3p3y_A 245 IA-SGVPTPDIAWYKKGGDLPSD--KAKFEN--------FNKALRITNVSEEDSGEYFCLASNKMGSIRH 303 (404)
T ss_dssp CB-CCSSCCEEEEEETTBCCCTT--TEEEEG--------GGTEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred EE-CCCCCCcEEEEECCEECCCC--cccccc--------cCceEEEccCCHhHCEEEEEEEEeCCCcEEE
Confidence 98 89999999999999987522 221111 1236889999999999999999999998653
No 38
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.2e-31 Score=206.18 Aligned_cols=228 Identities=17% Similarity=0.230 Sum_probs=168.2
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.++|.|.+.+ .+.|++++..+. ......+.|.|.+++.+|+|.|+|.+.
T Consensus 11 ~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~---------~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 77 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNE---------MVENKKNEWIQEKAEATRTGTYTCSNS 77 (290)
T ss_dssp -CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSC---------EEEECSSEEEETTCCGGGCEEEEEEES
T ss_pred CCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCccee---------eecCCCceEEEeccCHHhCeEEEEEee
Confidence 4566666677788999999999999976 899999987541 112223789999999999999999999
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC-CceEEE-eCCeeCCCCCccEEEcCCCcE
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP-PHIRWY-KNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~~W~-~~~~~l~~~~~~~~~~~~~~l 192 (292)
| +. ...+.|.|.. ++..+ ..+....+.+|+.+.|.|.+.+ |. +.+.|+ ++|..+... .++.....+.|
T Consensus 78 n--g~-~~~~~l~V~~----~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~-~~~~~~~~~~L 147 (290)
T 2o26_X 78 N--GL-TSSIYVFVRD----PAKLF-LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD-LTFVPNPKAGI 147 (290)
T ss_dssp S--SC-EEEEEEEEEC----SSCCB-CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT-CEEEEETTTEE
T ss_pred C--Cc-cEEEEEEEeC----CCccc-ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC-CceeeCCCCCE
Confidence 8 33 5555566553 12222 4566677889999999999985 77 889995 688777653 55556666789
Q ss_pred EEEeeecCCCC-CC----------------------------------cceEEeCCCceEEEeeCCCCCCCCe-EEEeEc
Q psy15128 193 QIDVLRDDFRA-EP----------------------------------KDTRVASGETALLECGPPKGQPEPT-LHWKKN 236 (292)
Q Consensus 193 ~i~~~~~~d~g-~~----------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~ 236 (292)
.|.++..+|+| .| ....+.+|+.+.|.|.+ .+.|.+. +.|+++
T Consensus 148 ~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~-~g~p~p~~i~W~~~ 226 (290)
T 2o26_X 148 TIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTI-KDVSTSVNSMWLKM 226 (290)
T ss_dssp EEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEE-EESSTTCEEEEEEE
T ss_pred EEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEE-ecCCcceeEEEecC
Confidence 99999999999 43 12235679999999998 7889886 999999
Q ss_pred CeEe----ccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 237 GQFI----DLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 237 g~~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
|..+ ......... .. +.......|.|..+..+|+|.|+|.|.|..|.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~--~~--~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~ 280 (290)
T 2o26_X 227 NPQPQHIAQVKHNSWHR--GD--FNYERQETLTISSARVDDSGVFMCYANNTFGSANV 280 (290)
T ss_dssp SSSEEECCCEECCEEEE--ET--TEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEE
T ss_pred CCCCccceeeccccccc--Cc--eeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEE
Confidence 8773 211211111 11 11122347999999999999999999999998864
No 39
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=2.1e-31 Score=214.20 Aligned_cols=234 Identities=21% Similarity=0.309 Sum_probs=166.6
Q ss_pred CcEEeCCCccEE---ecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccC-CCCCCeEEEEE
Q psy15128 37 PSFVVRPQDQKV---GLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGV-QKEDAGFFVCS 112 (292)
Q Consensus 37 p~~~~~~~~~~~---~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~Y~C~ 112 (292)
|.+...|....+ .+|+.+.|.|.+.|.|.|.+.|+|++..+..... .+.. ..++.|.|.+. ..+|+|.|+|.
T Consensus 6 P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~---~~~~-~~~g~l~i~~~~~~~D~G~Y~C~ 81 (384)
T 3kld_A 6 PVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMD---FRYS-VVDGSLLINNPNKTQDAGTYQCI 81 (384)
T ss_dssp EEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC-------CEE-EETTEEEEESCCHHHHCEEEEEE
T ss_pred CEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCC---ccEE-EECCEEEEcCCCCcccCEEEEEE
Confidence 455556655554 4789999999999999999999999987642211 1222 23556777765 78899999999
Q ss_pred EEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec-cCCCCceEEEeCCeeCCCCCccEEEcCCC
Q psy15128 113 ALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV-GSPPPHIRWYKNGNSLPPEDTRINVSSSG 190 (292)
Q Consensus 113 ~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~ 190 (292)
|.|..|... ....+.+.... ...........+.+|+.+.|.|... +.|.+.+.|++++.++.....++.....+
T Consensus 82 A~N~~G~~~s~~~~l~v~~~~----~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 157 (384)
T 3kld_A 82 ATNSFGTIVSREAKLQFAYLE----NFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG 157 (384)
T ss_dssp EEETTEEEECCCEEEEEEEEC----CCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTC
T ss_pred EEcCcccEEecceEEEEeccc----ccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCC
Confidence 999877542 23444443221 1111123445678999999999764 44678899999998886554555555677
Q ss_pred cEEEEeeecCCCCCC----------------------------------------cceEEeCCCceEEEeeCCCCCCCCe
Q psy15128 191 SLQIDVLRDDFRAEP----------------------------------------KDTRVASGETALLECGPPKGQPEPT 230 (292)
Q Consensus 191 ~l~i~~~~~~d~g~~----------------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~ 230 (292)
.|.|.++..+|+|.| ....+.+|+.+.|.|.+ .|.|.|.
T Consensus 158 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~ 236 (384)
T 3kld_A 158 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFA-LGNPVPT 236 (384)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEE-EEESCCE
T ss_pred cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEE-eecCCCc
Confidence 899999999999933 12345689999999998 8999999
Q ss_pred EEEeEc-CeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 231 LHWKKN-GQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 231 ~~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
+.|+++ +..+. ...+.. . ....|.|..+..+|+|.|+|.|.|..|....
T Consensus 237 i~W~k~~~~~~~--~~~~~~-~--------~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 286 (384)
T 3kld_A 237 ILWRRADGKPIA--RKARRH-K--------SNGILEIPNFQQEDAGSYECVAENSRGKNVA 286 (384)
T ss_dssp EEEEETTCCCCC--TTCEEC-T--------TSCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEeCCCcccc--ccceec-C--------CCcEEEECCCChhhCEEEEEEEEcCCCeEEE
Confidence 999994 55553 111111 1 1226889999999999999999999998653
No 40
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=215.06 Aligned_cols=266 Identities=12% Similarity=0.115 Sum_probs=143.9
Q ss_pred cCCCeeEEEEEEeccccccccc---EE---------EEEeCC---CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEE
Q psy15128 7 KSDEGKYQCYVQNMVGERETKP---AL---------LTVHAP---PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWT 71 (292)
Q Consensus 7 ~~D~G~Y~C~~~~~~~~~~~~~---~~---------l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~ 71 (292)
-.|.|.|+|...+......+.. .. |..... +.++..+....+.+|+++.|.|.+.+.|.+.+.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~ 83 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWV 83 (423)
T ss_dssp ----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEE
Confidence 4688999999986533321111 12 211111 23445566788999999999999999999999999
Q ss_pred ECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCC
Q psy15128 72 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLH 151 (292)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g 151 (292)
+++..+..... . .........|.|.+++.+|+|.|+|.|.|..+.....+.|.|.. +|.+.. .....+..|
T Consensus 84 ~~~~~l~~~~~--~-~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~-----~p~~~~-~~p~~~~~~ 154 (423)
T 3qs7_E 84 FKHSSLNCQPH--F-DLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN-----TLLYTL-RRPYFRKME 154 (423)
T ss_dssp ETTEEECCCCB--C------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC----------CE-EEEEEEECS
T ss_pred ECCCccCccce--e-ccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEec-----Cccccc-cCCcEeccC
Confidence 99876532110 0 00011123699999999999999999999888766666666542 222211 111224568
Q ss_pred CeEEEEeEeccCCCCceEEEeCCeeCCCCC----ccE-------EEcCCCcEEEEeee---------------cCCCCCC
Q psy15128 152 SVAFLPCQAVGSPPPHIRWYKNGNSLPPED----TRI-------NVSSSGSLQIDVLR---------------DDFRAEP 205 (292)
Q Consensus 152 ~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~----~~~-------~~~~~~~l~i~~~~---------------~~d~g~~ 205 (292)
+.+.|.|.+.|.|.|.+.|++++..+.... ..+ .....|.+.+.... ......+
T Consensus 155 ~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~ 234 (423)
T 3qs7_E 155 NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTL 234 (423)
T ss_dssp SSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSST
T ss_pred CceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCC
Confidence 888999999999999999999877543210 000 00111222222110 0011133
Q ss_pred cceEEeCCCceEEEeeCCCC-CCCCeEEEeEcCeEeccCCCce-EEecCCCccccccccccccccccccccceeEEEEee
Q psy15128 206 KDTRVASGETALLECGPPKG-QPEPTLHWKKNGQFIDLESSKR-VSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKN 283 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~-~p~~~~~W~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n 283 (292)
....+.+|+.+.|.|.+ .+ .|.+.|.|+++|..+....... ........ ......|.|..+..+|+|.|+|.|.|
T Consensus 235 ~~~~v~~G~~v~L~C~~-~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~A~N 311 (423)
T 3qs7_E 235 PQLFLKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT--MIRILFAFVSSVARNDTGYYTCSSSK 311 (423)
T ss_dssp TEEEEETTSCEEEEEEE-EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTE--EEEEEEEEESSCCTTTCEEEEEEETT
T ss_pred CceEEeCCCeEEEEEEE-EcCCCCcEEEEEECCEEccccceeecccccCCce--eEEEEEEEEeecCHHHCEEEEEEEec
Confidence 45678899999999999 66 7789999999998874221110 11111110 11223589999999999999999999
Q ss_pred c
Q psy15128 284 I 284 (292)
Q Consensus 284 ~ 284 (292)
.
T Consensus 312 ~ 312 (423)
T 3qs7_E 312 H 312 (423)
T ss_dssp E
T ss_pred C
Confidence 8
No 41
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=2.9e-32 Score=215.35 Aligned_cols=241 Identities=18% Similarity=0.333 Sum_probs=107.7
Q ss_pred CCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++..+... .+.. ..++.|.|.+++.+|+|.|+|.+.+. +..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~-----~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~ 86 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPS-----ERVL-VGPQRLQVLNASHEDSGAYSCRQRLT-QRV 86 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCc-----ccEE-eccceEEEeecccccCEEEEEEEEeC-CeE
Confidence 3667788999999999999876 57899999998766321 1121 23568999999999999999999987 555
Q ss_pred eEEEEEEEEeecCC-----------------CCCeEEe----CCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCC
Q psy15128 121 TVRAFLQVTSVEDT-----------------PPPIVQV----GPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPP 179 (292)
Q Consensus 121 ~~~~~l~v~~~~~~-----------------~~~~~~~----~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~ 179 (292)
.....|.|...... .+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 87 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 87 LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp --------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCT
T ss_pred EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcc
Confidence 55555555432110 0122211 11224577899999999999999999999999988865
Q ss_pred CCcc--E-EEcCCCcEEEEeeecCCCCC----------------------------------CcceEEeCCCceEEEeeC
Q psy15128 180 EDTR--I-NVSSSGSLQIDVLRDDFRAE----------------------------------PKDTRVASGETALLECGP 222 (292)
Q Consensus 180 ~~~~--~-~~~~~~~l~i~~~~~~d~g~----------------------------------~~~~~~~~g~~~~l~C~~ 222 (292)
.... . .......|.|.++..+|+|. +....+.+|+.+.|.|.+
T Consensus 167 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~ 246 (334)
T 1ry7_B 167 EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV 246 (334)
T ss_dssp TSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCC
T ss_pred cccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEE
Confidence 4321 1 11234478899999999882 134567889999999998
Q ss_pred CCCCCCCeEEEeE----cCeEeccCCCceEEecCCCccc--cccccccccccccccccceeEEEEeeccccccc
Q psy15128 223 PKGQPEPTLHWKK----NGQFIDLESSKRVSILGDPWFD--SRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 223 ~~~~p~~~~~W~~----~g~~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.+.|.+.+.|++ +|..+.......+......... ......|.|..+...|+|.|+|.|.|..|.+..
T Consensus 247 -~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 319 (334)
T 1ry7_B 247 -YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHH 319 (334)
T ss_dssp -BCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEE
T ss_pred -ecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEE
Confidence 889999999999 7777753332222222221111 111236889999999999999999999998764
No 42
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=1e-29 Score=200.17 Aligned_cols=244 Identities=17% Similarity=0.328 Sum_probs=154.8
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeE----EeeccCCCcceeEE--------eeecEEEEccCCCC
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQ----VLMFPGNAYGHLHV--------TQEGTLRIQGVQKE 104 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~----~~~~~~~~~~~~~~--------~~~~~l~i~~~~~~ 104 (292)
.+...+....+.+|+.+.|.|.+.+. |.+.+.|+|++.. +....+....+... .....|.|.+++.+
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 34455667889999999999999887 8889999998743 11111111122221 23457999999999
Q ss_pred CCeEEEEEEEeCCcCee-----EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC--ceEEEeCCeeC
Q psy15128 105 DAGFFVCSALSVAGSTT-----VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP--HIRWYKNGNSL 177 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~~-----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~~~W~~~~~~l 177 (292)
|+|.|+|.+.+..+... ....|.|.. ...++.+. .+ ...+.+|+.+.|.|.+.+.|++ .+.|+++|.++
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~--~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l 160 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRA--KPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNEL 160 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEB--CCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEe--cCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEc
Confidence 99999999998755421 223455543 22333443 33 3567899999999999888665 89999999988
Q ss_pred CCCCccEEEc-CCC------cEEEEeeecCCCCCC---------------------------cceE-----EeCCCceEE
Q psy15128 178 PPEDTRINVS-SSG------SLQIDVLRDDFRAEP---------------------------KDTR-----VASGETALL 218 (292)
Q Consensus 178 ~~~~~~~~~~-~~~------~l~i~~~~~~d~g~~---------------------------~~~~-----~~~g~~~~l 218 (292)
.......... .++ .|.|.....+|.|.| +... +.+|+.+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l 240 (327)
T 2wng_A 161 SDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNV 240 (327)
T ss_dssp CCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEE
T ss_pred cccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEE
Confidence 7543211111 112 233443333444511 1111 348999999
Q ss_pred EeeCCCC-CCCC-eEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 219 ECGPPKG-QPEP-TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 219 ~C~~~~~-~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.|.+ .+ .|++ .+.|+++|+++.......+....++.+.. ...|.|..+..+|+|.|+|.|+|..|.+
T Consensus 241 ~C~~-~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~--~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 241 TCQV-RKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNW--MSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEE-EEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEE--EEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEE-ccccCCCcEEEEEECCeEccCcccCceEECCCCcEEE--EEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 9998 66 4554 89999999998643333344444443321 1257788889999999999999999975
No 43
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=3.1e-32 Score=222.51 Aligned_cols=282 Identities=15% Similarity=0.174 Sum_probs=177.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~ 160 (434)
T 1igy_B 82 LSSLTSDDSAVYYCVREGEVPYWGQG-TTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 160 (434)
T ss_dssp ECSBCGGGCSEECCCCSSSSCCCCCC-EECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTB
T ss_pred ECCCChHHCEEEEEEEEccccccCCc-eEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCc
Confidence 78999999999999998854333333 7788863 4544433333345789999999999886 666 999999886
Q ss_pred EEeeccCCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEee--------cCCCCCeEEeCCCCc
Q psy15128 76 QVLMFPGNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSV--------EDTPPPIVQVGPSNQ 146 (292)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~--------~~~~~~~~~~~~~~~ 146 (292)
.+....... .........+.|.|.++..+| |.|+|.+.|..+.......+.+... ....+.+....+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~ 239 (434)
T 1igy_B 161 SSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPK 239 (434)
T ss_dssp CSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHH
T ss_pred CCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChH
Confidence 421100000 000112234579999999888 9999999998887544444332100 000123333333322
Q ss_pred e-ecCCCeEEEEeEeccCC----CCceEEEeCCeeCCCCCccEE-------EcCCCcEEEEeeecCCCCCC---------
Q psy15128 147 T-LPLHSVAFLPCQAVGSP----PPHIRWYKNGNSLPPEDTRIN-------VSSSGSLQIDVLRDDFRAEP--------- 205 (292)
Q Consensus 147 ~-~~~g~~v~l~C~~~~~p----~~~~~W~~~~~~l~~~~~~~~-------~~~~~~l~i~~~~~~d~g~~--------- 205 (292)
. +.+|+.+.|.|.+.+.+ .+.+.|++++..+........ ....+.|.|.++..+|+|.|
T Consensus 240 ~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 240 DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCC
Confidence 2 78999999999998873 357999999887653211000 11234688888887787722
Q ss_pred -----------------cceEE-------eCCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCCCceEEecCCCccccc
Q psy15128 206 -----------------KDTRV-------ASGETALLECGPPKG-QPE-PTLHWKKNGQFIDLESSKRVSILGDPWFDSR 259 (292)
Q Consensus 206 -----------------~~~~~-------~~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 259 (292)
+.+.+ ..|+.++|.|.+ .| +|+ +.|.|+++|+++............++.+..
T Consensus 320 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~- 397 (434)
T 1igy_B 320 PAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMI-TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFV- 397 (434)
T ss_dssp SSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEE-EEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEE-
T ss_pred CCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEE-EeeECCCeEEEEEECCEecCCceeccceeCCCCcEEE-
Confidence 11111 246779999998 66 454 499999999988421111111233333321
Q ss_pred cccccccccccccccceeEEEEeeccccc
Q psy15128 260 RSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 260 ~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
...|.+.....+|.|.|+|.|.|.....
T Consensus 398 -~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 425 (434)
T 1igy_B 398 -YSKLNVQKSNWEAGNTFTCSVLHEGLHN 425 (434)
T ss_dssp -EEEEEEEHHHHHTTCCEEEEEEETTSGG
T ss_pred -EEEEEECchhccCCCEEEEEEEcCCCCC
Confidence 2245566667778999999999987653
No 44
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=197.58 Aligned_cols=212 Identities=14% Similarity=0.123 Sum_probs=160.5
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCC-eeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLP-SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+.. ....|.|.+++.+|+|.|+|.+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~------------~~~~l~i~~~~~~d~G~Y~C~~~ 68 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT------------STPSYRITSASVNDSGEYRCQRG 68 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC------------CSSEEEESSCCGGGCEEEEEEES
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec------------cCCeEEEecCCcccCeEEEEEEe
Confidence 3667778888889999999999999888877 9999999887521 14679999999999999999998
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCCeeCCCCCccEEEcCCCcEE
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQ 193 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~ 193 (292)
+..+.. ...+.+.. ++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.|.
T Consensus 69 ~~~~s~--~~~l~v~~-----~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~------~~~~~l~ 134 (262)
T 3rjd_A 69 LSGRSD--PIQLEIHR-----GW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF------HWNSNLT 134 (262)
T ss_dssp SSCCCC--CEEEEEEC-----SS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE------EECCCEE
T ss_pred cCCccc--cEEEEEec-----cc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc------CCCCeEE
Confidence 765443 34444442 22 3334455668899999999999 67788899999998876431 1245677
Q ss_pred EEeeecCCCCCC-------------------------------cceEEeCCCceEEEeeCCCCCCC-C----eEEEeEcC
Q psy15128 194 IDVLRDDFRAEP-------------------------------KDTRVASGETALLECGPPKGQPE-P----TLHWKKNG 237 (292)
Q Consensus 194 i~~~~~~d~g~~-------------------------------~~~~~~~g~~~~l~C~~~~~~p~-~----~~~W~~~g 237 (292)
|.++..+|+|.| ....+.+|+.+.|.|.+ .+.|. + .+.|+++|
T Consensus 135 i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~-~~~p~~p~~~~~~~w~~~~ 213 (262)
T 3rjd_A 135 ILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCET-KLLLQRPGLQLYFSFYMGS 213 (262)
T ss_dssp ESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEEC-CCCCC-----EEEEEEETT
T ss_pred EEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEc-ccCCCCCCccEEEEEEeCC
Confidence 777777777711 22346789999999998 77765 4 47899999
Q ss_pred eEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 238 QFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
..+... .....|.|..+..+|+|.|+|.|.|..|+..
T Consensus 214 ~~~~~~---------------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~ 250 (262)
T 3rjd_A 214 KTLRGR---------------NTSSEYQILTARREDSGLYWCEAATEDGNVL 250 (262)
T ss_dssp EEEEEE---------------ESCCEEEESSCCGGGCEEEEEEEEETTSSCE
T ss_pred cEeccc---------------CCCceEEEEEechhhCeEEEEEEEcccCceE
Confidence 877411 1122588899999999999999999999753
No 45
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=204.73 Aligned_cols=230 Identities=13% Similarity=0.210 Sum_probs=164.5
Q ss_pred ccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 45 DQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
...+.+|+.+.|.|... +.|.+.+.|+|++..+. .. .+.... ....|.|.+++.+|+|.|+|.+.|..+..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~--~~---~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~ 84 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTE--DS---PRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIA 84 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECT--TC---TTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCC
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECC--CC---CCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcE
Confidence 45677899999988775 46888999999998763 11 122222 22489999999999999999999877744
Q ss_pred eEEEEEEEEeecC--------CCCCeEEeCCCCceecCCCeEEEEeEec-cCCCCceEEEeCCeeCCCCCccEEEcC---
Q psy15128 121 TVRAFLQVTSVED--------TPPPIVQVGPSNQTLPLHSVAFLPCQAV-GSPPPHIRWYKNGNSLPPEDTRINVSS--- 188 (292)
Q Consensus 121 ~~~~~l~v~~~~~--------~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~--- 188 (292)
. ...+.+..... .++......+....+.+|+.+.|.|.+. +.|.+.+.|++++.++.... ++.+..
T Consensus 85 ~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~-~~~~~~~~~ 162 (312)
T 2y23_A 85 S-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP-KYKMHIDRN 162 (312)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSS-SCEEEEETT
T ss_pred E-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCC-cEEEEEccC
Confidence 3 34443321000 0222222222356788999999999998 78999999999999987653 222222
Q ss_pred CC--cEEEEeeecCCCCCCc-----------------------------------------------ceEEeCCCceEEE
Q psy15128 189 SG--SLQIDVLRDDFRAEPK-----------------------------------------------DTRVASGETALLE 219 (292)
Q Consensus 189 ~~--~l~i~~~~~~d~g~~~-----------------------------------------------~~~~~~g~~~~l~ 219 (292)
.+ .|.|.++..+|+|.|. ...+.+|+.+.|.
T Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~ 242 (312)
T 2y23_A 163 TGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLK 242 (312)
T ss_dssp TTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEE
T ss_pred CCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEE
Confidence 22 3889999999998331 1367899999999
Q ss_pred eeCCCCCCCC-eEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 220 CGPPKGQPEP-TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 220 C~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
|.+ .+.|++ .+.|+++|..+.. +.++.+..+ ...|.|..+..+|+|.|+|.|+|..|+++.+
T Consensus 243 C~~-~~~p~~~~v~W~~~g~~~~~--~~~~~~~~~-------~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~ 305 (312)
T 2y23_A 243 CKV-ANIKKETHIVWYKDEREISV--DEKHDFKDG-------ICTLLITEFSKKDAGIYEVILKDDRGKDKSR 305 (312)
T ss_dssp EEE-ESCCSSCEEEEEETTEEEEE--ECCC----C-------EEEEEECSCSGGGCEEEEEEEESTTCCEEEE
T ss_pred EEE-cCCCCCCEEEEeeCCEECCC--CCcEEEECC-------EEEEEECcCCHHHCEEEEEEEEcCCCceeee
Confidence 998 788887 9999999999863 222222211 2368899999999999999999999998653
No 46
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=8.8e-32 Score=210.86 Aligned_cols=239 Identities=18% Similarity=0.231 Sum_probs=169.2
Q ss_pred CccEEecCCcEEEEEEEeeeC-CCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE
Q psy15128 44 QDQKVGLNGIASFQCVAEGSP-LPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~ 122 (292)
....+.+|+.+.|.|.+.+.+ .+.+.|++++..+.... ....+... .++.|.|.+++.+|+|.|+|.+.|..+....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~-~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVST-EQASRIHQ-HKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI 90 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCC-CTTSSSEE-CSSBEECTTCCGGGCSCCEECCCSSSCCCCE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCcccc-ccCCcEec-cCCeEEECCCChhhCEEEEEEEeCCceEEEE
Confidence 356788999999999998876 77999999986542211 11222222 2458999999999999999999988776655
Q ss_pred EEEEEEEeecCCCCCeEEeCC---CCceecCCCeEEEEeEe------ccCCCCceEEEeCCeeCCCCCccEEEcCCCcEE
Q psy15128 123 RAFLQVTSVEDTPPPIVQVGP---SNQTLPLHSVAFLPCQA------VGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQ 193 (292)
Q Consensus 123 ~~~l~v~~~~~~~~~~~~~~~---~~~~~~~g~~v~l~C~~------~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~ 193 (292)
...+.+... +|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++.++.....++ ....+.|.
T Consensus 91 ~~~v~v~~~----~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~-~~~~~~L~ 165 (315)
T 1itb_B 91 KISAKFVEN----EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF-SGVKDRLI 165 (315)
T ss_dssp ECCCEEECC----CTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-EEETTEEE
T ss_pred EEEEEEeCC----CCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-eecCceEE
Confidence 555444321 22111111 12357789999999998 788999999999999987644443 23455788
Q ss_pred EEeeecCCCCCC-------------------------------------c--ceEEeCCCceEEEeeCCCCCCCCeEEEe
Q psy15128 194 IDVLRDDFRAEP-------------------------------------K--DTRVASGETALLECGPPKGQPEPTLHWK 234 (292)
Q Consensus 194 i~~~~~~d~g~~-------------------------------------~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 234 (292)
|.++..+|+|.| . ...+.+|+.+.|.|.+ .+.|.+.+.|+
T Consensus 166 i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~-~g~P~p~i~W~ 244 (315)
T 1itb_B 166 VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV-TGQLSDIAYWK 244 (315)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEE-EECTTSEEEEE
T ss_pred EEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEE-ecCCCCeeEEE
Confidence 888888887721 1 1356789999999998 88999999999
Q ss_pred EcCeEeccCCC----ceEEecCCCc-cccccccccccccccccc-cceeEEEEeeccccccc
Q psy15128 235 KNGQFIDLESS----KRVSILGDPW-FDSRRSRSIFGSVLGALS-DDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 235 ~~g~~~~~~~~----~~~~~~~~~~-~~~~~~~~l~i~~~~~~~-~g~y~C~a~n~~g~~~~ 290 (292)
++|..+..... .......... ........|.|..+..+| +|.|+|.|+|..|.++.
T Consensus 245 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 306 (315)
T 1itb_B 245 WNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAA 306 (315)
T ss_dssp ETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEE
T ss_pred ECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeE
Confidence 99999864332 1111111100 001122368899999999 99999999999999865
No 47
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=7.5e-33 Score=241.63 Aligned_cols=273 Identities=16% Similarity=0.249 Sum_probs=30.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCC---CccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRP---QDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+ ....+.+|+.++|.|.+.+.|.+.+.|++++..+.
T Consensus 294 i~~v~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~ 372 (772)
T 3v2a_R 294 IDGVTRSDQGLYTCAASSGLMTKKNS-TFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLE 372 (772)
T ss_dssp ESSCCSTTCSEEEEEEECSSCEEEEE-EEEEEECCCC-------------------------------------------
T ss_pred ECcCCcCCCeEEEEEEEcCCcceeEE-EEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCC
Confidence 67899999999999999887765555 889998888665433 35668889999999999999999999999987663
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEe---CCCCceecCCCeEE
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQV---GPSNQTLPLHSVAF 155 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~---~~~~~~~~~g~~v~ 155 (292)
. .........|.|.++..+|+|.|+|.+.|..+.......+.+.+. .+|.+.. ......+.+|+.++
T Consensus 373 ~-------~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~---~~P~~~~~~~~~~~~~~~~g~~~~ 442 (772)
T 3v2a_R 373 S-------NHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY---VPPQIGEKSLISPVDSYQYGTTQT 442 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C-------CceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEe---cCCcccccccCCCccccCCCCcEE
Confidence 2 111224578999999999999999999998776544433333322 1222211 11212377899999
Q ss_pred EEeEeccCCCCc-eEEEeCCee--------------------------------CCCCCccEEEcC-----CCcEEEEee
Q psy15128 156 LPCQAVGSPPPH-IRWYKNGNS--------------------------------LPPEDTRINVSS-----SGSLQIDVL 197 (292)
Q Consensus 156 l~C~~~~~p~~~-~~W~~~~~~--------------------------------l~~~~~~~~~~~-----~~~l~i~~~ 197 (292)
|.|.+.+.|.|. +.|++++.. +.....+..... ...|.|.++
T Consensus 443 l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~ 522 (772)
T 3v2a_R 443 LTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA 522 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec
Confidence 999999998886 999996322 111001111101 134566555
Q ss_pred ecCCCCCC----------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEE
Q psy15128 198 RDDFRAEP----------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVS 249 (292)
Q Consensus 198 ~~~d~g~~----------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~ 249 (292)
+|+|.| +...+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.........
T Consensus 523 --~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~ 599 (772)
T 3v2a_R 523 --NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTA-DRSTFENLTWYKLGPQPLPIHVGELP 599 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --ccCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEec-cCCCCCCcEEEEcCCcccccccCccc
Confidence 566622 22446789999999998 88999999999998766422211111
Q ss_pred ec-----------CCCcccc--ccccccccccccccccceeEEEEeeccccc
Q psy15128 250 IL-----------GDPWFDS--RRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 250 ~~-----------~~~~~~~--~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.. ....+.. .....|.|..+..+|+|.|+|.|.|..|..
T Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 651 (772)
T 3v2a_R 600 TPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKK 651 (772)
T ss_dssp ----------------------------------------------------
T ss_pred ccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCe
Confidence 00 0000000 112348899999999999999999976654
No 48
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=2.8e-30 Score=208.06 Aligned_cols=236 Identities=19% Similarity=0.293 Sum_probs=170.2
Q ss_pred CCcEEeCCCc-cEEecCCcEEEEEEEeeeCCCeeEEEE-CCeEEeeccCCCcceeEEeeecEEEEccCCCCC------Ce
Q psy15128 36 PPSFVVRPQD-QKVGLNGIASFQCVAEGSPLPSVFWTQ-EGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKED------AG 107 (292)
Q Consensus 36 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d------~g 107 (292)
+|.+...|.. ..+.+|+.++|.|.+.|.|.+.+.|++ ++..+.... .......++.|.|.+++.+| +|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~----~~~~~~~~~~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVP----GLRQISSDGKLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBT----TTBEECSTTEEEECCCCGGGCCHHHHEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCC----CceEEcCCceEEecccChhhccccccCc
Confidence 4667776655 457789999999999999999999999 666543111 11223456789999999987 99
Q ss_pred EEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC---CceEEEeCCeeCCCC---
Q psy15128 108 FFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP---PHIRWYKNGNSLPPE--- 180 (292)
Q Consensus 108 ~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~---~~~~W~~~~~~l~~~--- 180 (292)
.|+|.+.|..+.. ...+.+.+.. ++.+...+....+.+|+.+.|.|.+.+.+. +.+.|++++..+...
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~-----~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~ 153 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVV-----AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE 153 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC-----CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSC
T ss_pred eEEEEEEccCCeEEecceEEEEcc-----ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccC
Confidence 9999999987753 2334444432 233333455667889999999999987643 679999998765321
Q ss_pred -CccEEEcCCCcEEEEeeecCCC-CCC---------------------------------------cceEEeCCCceEEE
Q psy15128 181 -DTRINVSSSGSLQIDVLRDDFR-AEP---------------------------------------KDTRVASGETALLE 219 (292)
Q Consensus 181 -~~~~~~~~~~~l~i~~~~~~d~-g~~---------------------------------------~~~~~~~g~~~~l~ 219 (292)
..+.....++.|.|.++..+|+ |.| ....+.+|+.+.|.
T Consensus 154 ~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~ 233 (388)
T 2v5m_A 154 YDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLL 233 (388)
T ss_dssp BTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEEC
T ss_pred CCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEE
Confidence 2455566778899999999998 722 12356789999999
Q ss_pred eeCCCCCCCCeEEEeEcCeEecc----CCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 220 CGPPKGQPEPTLHWKKNGQFIDL----ESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 220 C~~~~~~p~~~~~W~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
|.+ .+.|.+.+.|++++..+.. ....++.. ....|.|..+..+|+|.|+|.|.|..|..+.
T Consensus 234 C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 298 (388)
T 2v5m_A 234 CPA-QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ---------VSGTLIIKDAVVEDSGKYLCVVNNSVGGESV 298 (388)
T ss_dssp CCC-EEESCCEEEEEEECTTSSCEEECCCSSSEEE---------ETTEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred EEC-CCCCCCEEEEEecCCCCcccccccccCceec---------ccCEEEECcCCHHHCeEEEEEEecCCCceeE
Confidence 998 7899999999998543310 11112211 1236889999999999999999999998653
No 49
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2.2e-30 Score=204.08 Aligned_cols=231 Identities=15% Similarity=0.163 Sum_probs=164.0
Q ss_pred CccEEecCCcEEEEEEEeee---------CCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCe-EEEEEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGS---------PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAG-FFVCSA 113 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~---------~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~Y~C~~ 113 (292)
....+.+|+.+.|.|.+.+. |.+.+.|+|++..+.... +. ...+.|.|.+++.+|+| .|+|.+
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~-----~~--~~~~~L~i~~v~~~D~Gs~Y~C~a 109 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLN-----RR--VKNGDLWIANYTSNDSHRRYLCTV 109 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECS-----TT--EETTEEEESSCCGGGGGCCEEEEE
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccC-----ce--eecceEEEcCCChHhCCCcEEEEE
Confidence 45568899999999998774 557899999987654311 11 33679999999999999 999999
Q ss_pred EeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCC-CCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 114 LSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP-PPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 114 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
.|..|.........+. . .++..+. .+....+.+|+.+.|.|.+.+.| .+.+.|+|++..+.....++... ++.|
T Consensus 110 ~n~~g~~~~~~~~~v~--~-~~p~~~~-~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L 184 (329)
T 3oq3_B 110 TTKNGDCVQGIVRSHI--R-KPPSCIP-ETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNL 184 (329)
T ss_dssp ECTTSCEEEEEEEEEE--C-CCCSCEE-EEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEE
T ss_pred EeCCCceeeEEEEEEE--c-CCCcEec-cccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-CCEE
Confidence 9987764433322222 1 2222222 22223356799999999999998 89999999999986544444443 5678
Q ss_pred EEEeeecCCCCCC--------------------------------------cceEEeCCCceEEEeeCCCCCC---CC-e
Q psy15128 193 QIDVLRDDFRAEP--------------------------------------KDTRVASGETALLECGPPKGQP---EP-T 230 (292)
Q Consensus 193 ~i~~~~~~d~g~~--------------------------------------~~~~~~~g~~~~l~C~~~~~~p---~~-~ 230 (292)
.|.++..+|+|.| ....+.+|+.+.|.|.+ .+.| ++ .
T Consensus 185 ~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~~~i~ 263 (329)
T 3oq3_B 185 IIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTA-VSTSLLVDDVL 263 (329)
T ss_dssp EECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEE-EETTCCTTCCE
T ss_pred EEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEE-EECCCCCCCcE
Confidence 8887777777611 22456689999999998 7776 67 8
Q ss_pred EEEeEcCeEeccCCCceEEec--CCCccccccccccccccccccccc-eeEEEEeecccccccC
Q psy15128 231 LHWKKNGQFIDLESSKRVSIL--GDPWFDSRRSRSIFGSVLGALSDD-QWKLIAKNIRNQQQHG 291 (292)
Q Consensus 231 ~~W~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~~~g-~y~C~a~n~~g~~~~~ 291 (292)
+.|+++|..+.... .+.... ..+. .....|.|..+..+|+| .|+|.|.|..|.++.+
T Consensus 264 v~W~~~g~~i~~~~-~~~~~~~~~~~~---~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~ 323 (329)
T 3oq3_B 264 IDWENPSGWIIGLD-FGVYSILTSSGG---ITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLT 323 (329)
T ss_dssp EEEECTTSCBCCBC-SSEEEEEEEETT---EEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEE
T ss_pred EEEEECCeeeeccC-CceeeeecccCc---eeEeEEEEEeccHHHCCCcEEEEEEecCCceEEE
Confidence 99999998853222 221111 1111 13346999999999999 9999999999998653
No 50
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=7.1e-31 Score=229.21 Aligned_cols=227 Identities=22% Similarity=0.290 Sum_probs=86.0
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC--cEEeCCC-ccEEecCCcEEEEEEEeee--CCCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP--SFVVRPQ-DQKVGLNGIASFQCVAEGS--PLPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p--~~~~~~~-~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+.........+.+.+..++ .+.+.+. ...+.+|+.++|.|.+.+. +.+.+.|++++..
T Consensus 187 i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~ 266 (772)
T 3v2a_R 187 IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK 266 (772)
T ss_dssp EEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC---
T ss_pred ecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCcc
Confidence 678899999999999997654444432445554332 3334443 3688999999999999874 4568999998876
Q ss_pred EeeccCCC------cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEe---CCCCce
Q psy15128 77 VLMFPGNA------YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQV---GPSNQT 147 (292)
Q Consensus 77 ~~~~~~~~------~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~---~~~~~~ 147 (292)
+....... ...........|.|.+++.+|+|.|+|.+.+..+.......|.|.. +|.+.. .+....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~-----~p~~~~~~~~~~~~~ 341 (772)
T 3v2a_R 267 HQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE-----KPFVAFGSGMESLVE 341 (772)
T ss_dssp -----CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC-----CCC------------
T ss_pred CCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC-----CCeeEeccCCCCcEE
Confidence 43211000 0001123455899999999999999999998877666666666653 222222 223456
Q ss_pred ecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC----------------------
Q psy15128 148 LPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP---------------------- 205 (292)
Q Consensus 148 ~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~---------------------- 205 (292)
+.+|+.+.|.|.+.++|.+.+.|+++|..+... ........|.|.++..+|+|.|
T Consensus 342 v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~---~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~ 418 (772)
T 3v2a_R 342 ATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN---HTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY 418 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCC---ceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEe
Confidence 789999999999999999999999999888652 1222446889999999998822
Q ss_pred ------------cceEEeCCCceEEEeeCCCCCCCCe-EEEeEcC
Q psy15128 206 ------------KDTRVASGETALLECGPPKGQPEPT-LHWKKNG 237 (292)
Q Consensus 206 ------------~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~g 237 (292)
+...+.+|+.+.|.|.+ .+.|.+. +.|++++
T Consensus 419 ~~P~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~ 462 (772)
T 3v2a_R 419 VPPQIGEKSLISPVDSYQYGTTQTLTCTV-YAIPPPHHIHWYWQL 462 (772)
T ss_dssp ---------------------------------------------
T ss_pred cCCcccccccCCCccccCCCCcEEEEeEe-ccCCCCcEEEEEEcC
Confidence 11136789999999998 8888886 9999974
No 51
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=4e-29 Score=206.38 Aligned_cols=279 Identities=17% Similarity=0.173 Sum_probs=171.0
Q ss_pred cccCCcCCCeeEEEEEEecccc-----cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CC-C-eeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE-----RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PL-P-SVF 69 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~-~v~ 69 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. |. + .|.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~~p~~v~ 162 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQEPLSVT 162 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCCCceEEE
Confidence 7899999999999999987642 122336788763 34444332 2223689999999999986 55 4 999
Q ss_pred EEECCeEEeeccCCC---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeec--------------
Q psy15128 70 WTQEGSQVLMFPGNA---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVE-------------- 132 (292)
Q Consensus 70 W~~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~-------------- 132 (292)
|++++.......... .........+.|.|..+..+|.|.|+|.+.|..+. .....+.+.+..
T Consensus 163 W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~-~~~~~v~l~V~~~~~~~~~~~~~~~~ 241 (475)
T 1iga_A 163 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP-SQDVTVPCPVPSTPPTPSPSTPPTPS 241 (475)
T ss_pred EcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC-ceeeeEecccccCcccccccccccCC
Confidence 999874321110000 00111222346889999999999999999998753 223333321100
Q ss_pred -CCCCCeE-EeCCCCceecCCCeEEEEeEeccCCC---CceEEEeCCeeCCCCC-ccEEE------cCCCcEEEEeeecC
Q psy15128 133 -DTPPPIV-QVGPSNQTLPLHSVAFLPCQAVGSPP---PHIRWYKNGNSLPPED-TRINV------SSSGSLQIDVLRDD 200 (292)
Q Consensus 133 -~~~~~~~-~~~~~~~~~~~g~~v~l~C~~~~~p~---~~~~W~~~~~~l~~~~-~~~~~------~~~~~l~i~~~~~~ 200 (292)
...+|.+ ...+....+.+|+.+.|.|.+.+.++ +.+.| ++..+.... ..... ...+.|.|.++..+
T Consensus 242 ~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~ 319 (475)
T 1iga_A 242 PSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWN 319 (475)
T ss_pred CCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhc
Confidence 0013333 33333334689999999999988744 58999 444332211 11111 12235888888888
Q ss_pred CCCCC-------------------------cce--------EEeCCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCC-
Q psy15128 201 FRAEP-------------------------KDT--------RVASGETALLECGPPKG-QPE-PTLHWKKNGQFIDLES- 244 (292)
Q Consensus 201 d~g~~-------------------------~~~--------~~~~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~- 244 (292)
|+|.| +.+ .+..|+.+.|.|.+ .+ +|+ +.|.|+++|+.+....
T Consensus 320 d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~ 398 (475)
T 1iga_A 320 HGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLA-RGFSPKDVLVRWLQGSQELPREKY 398 (475)
T ss_pred cCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEE-eeeECCCCEEEEEECCEECCCCce
Confidence 88832 111 13468889999998 55 443 5999999999985332
Q ss_pred -CceEEec---CCCccccccccccccccccccccceeEEEEeecccc
Q psy15128 245 -SKRVSIL---GDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 245 -~~~~~~~---~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
....... .++.+. ....|.+......|.|.|+|.|.|....
T Consensus 399 ~~~~~~~~~~~~~gt~~--~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 399 LTWASRQEPSQGTTTFA--VTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred eecccccccCCCCCcEE--EEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 0111122 233322 2234666667777899999999998754
No 52
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=2.5e-30 Score=205.44 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=145.0
Q ss_pred CCccEEecCCcEEEEEEEeeeC-----------CCeeEEEECCeEEe---eccCCCcceeEEeeecEEEEccCCCCCCeE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP-----------LPSVFWTQEGSQVL---MFPGNAYGHLHVTQEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~-----------~~~v~W~~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 108 (292)
...+.+.+|+.+.|.|.+.+.| .+.+.|++++.... ...............+.|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 3467789999999999998755 38999999874211 000001111222345689999999999999
Q ss_pred EEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-----ccCCCCceEEEeCCeeCCCCCcc
Q psy15128 109 FVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-----VGSPPPHIRWYKNGNSLPPEDTR 183 (292)
Q Consensus 109 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-----~~~p~~~~~W~~~~~~l~~~~~~ 183 (292)
|+|.+.|..+.......|.|........+. ...+....+.+|+.+.|.|.+ .+.|.+.+.|++++.++... ..
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~-~~ 171 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSP-MKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF-NN 171 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCS-CCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC-SS
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcc-cccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc-cc
Confidence 999999987777766777776422111111 112234457899999999985 66788999999999988653 22
Q ss_pred EEEcCCCcEEEEeeecCCCCCC--------------------------------cc-------e--EEeCCCceEEEeeC
Q psy15128 184 INVSSSGSLQIDVLRDDFRAEP--------------------------------KD-------T--RVASGETALLECGP 222 (292)
Q Consensus 184 ~~~~~~~~l~i~~~~~~d~g~~--------------------------------~~-------~--~~~~g~~~~l~C~~ 222 (292)
+. .....|.|.++..+|+|.| +. . .+.+|+.+.|.|.+
T Consensus 172 ~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~ 250 (349)
T 4dep_C 172 VI-PEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV 250 (349)
T ss_dssp EE-EETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEE
T ss_pred ee-ecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEE
Confidence 22 2235688888888888811 11 1 56679999999998
Q ss_pred CC----CCCCCeEEEeEcCeEeccCCCceEEecC----CCcccccccccccccccccccc-ceeEEEEeeccccccc
Q psy15128 223 PK----GQPEPTLHWKKNGQFIDLESSKRVSILG----DPWFDSRRSRSIFGSVLGALSD-DQWKLIAKNIRNQQQH 290 (292)
Q Consensus 223 ~~----~~p~~~~~W~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~~~-g~y~C~a~n~~g~~~~ 290 (292)
. +.|.+.+.|+++|..+... ..++.... ...........|.|..+..+|+ |.|+|.|.|..|.++.
T Consensus 251 -~~~~~g~p~p~v~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 325 (349)
T 4dep_C 251 -YFSFLMDSRNEVWWTIDGKKPDDI-TIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAK 325 (349)
T ss_dssp -EECCCTTCCCEEEEESSCC---------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEE
T ss_pred -EEccCCCCCCEEEEEECCEEcccc-CCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEE
Confidence 5 5788999999999888531 11111110 0000011223588999999999 9999999999998765
No 53
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=2.3e-29 Score=202.30 Aligned_cols=233 Identities=19% Similarity=0.293 Sum_probs=168.3
Q ss_pred CCcEEeCCCccEE---ecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCC-CCCeEEEE
Q psy15128 36 PPSFVVRPQDQKV---GLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQK-EDAGFFVC 111 (292)
Q Consensus 36 ~p~~~~~~~~~~~---~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~Y~C 111 (292)
+|.+...|....+ .+|+.++|.|.+.+.|.+.+.|++++..+.... ..+... .++.|.|.++.. +|+|.|+|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~---~~~~~~-~~~~L~i~~~~~~~D~G~Y~C 79 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGP---DSRYRL-VAGDLVISNPVKAKDAGSYQC 79 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCST---TSSEEE-ETTEEEEESCCHHHHCEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCC---CccEEe-eCCeEEEecccccccCEEEEE
Confidence 5667777776665 689999999999999999999999998764222 122222 356899999997 99999999
Q ss_pred EEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCCeeCC--CCCccEEEc
Q psy15128 112 SALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNGNSLP--PEDTRINVS 187 (292)
Q Consensus 112 ~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~l~--~~~~~~~~~ 187 (292)
.+.|..|... ....+.+..... .....+....+.+|+.+.|.|.+ .+.|.+.+.|++++.++. .........
T Consensus 80 ~a~n~~g~~~s~~~~l~v~~~~~----~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 155 (382)
T 1cs6_A 80 VATNARGTVVSREASLRFGFLQE----FSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQ 155 (382)
T ss_dssp EEEETTEEEECCCEEEEEEEECC----CCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECT
T ss_pred EEEcCCcEEEecceEEEeecccc----ccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEec
Confidence 9999876542 234555543211 11123455678899999999996 456888999999987653 222222233
Q ss_pred CCCcEEEEeeecCCCCCC-----------------------------------------cceEEeCCCceEEEeeCCCCC
Q psy15128 188 SSGSLQIDVLRDDFRAEP-----------------------------------------KDTRVASGETALLECGPPKGQ 226 (292)
Q Consensus 188 ~~~~l~i~~~~~~d~g~~-----------------------------------------~~~~~~~g~~~~l~C~~~~~~ 226 (292)
..+.|.|.++..+|+|.| ....+.+|+.+.|.|.+ .+.
T Consensus 156 ~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~-~g~ 234 (382)
T 1cs6_A 156 TTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFA-FGN 234 (382)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEE-EEE
T ss_pred CceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEE-ccC
Confidence 346788888888877721 23456789999999998 889
Q ss_pred CCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 227 PEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 227 p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
|.+.+.|++++..+.. .. ......|.|..+..+|+|.|+|.|.|..|..+.
T Consensus 235 p~~~i~W~~~~~~~~~----~~---------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 285 (382)
T 1cs6_A 235 PVPQIKWRKLDGSQTS----KW---------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTY 285 (382)
T ss_dssp SCCEEEEEECCSCCSC----CC---------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCCEEEEEECCccccc----EE---------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEE
Confidence 9999999998876531 00 012236888999999999999999999998653
No 54
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=1.7e-29 Score=197.65 Aligned_cols=231 Identities=18% Similarity=0.287 Sum_probs=154.2
Q ss_pred EeCCCccEEecCCcEEEEEEEeeeCCC-----eeEEEECCeEEee--c-cC-----CCcceeEE--------eeecEEEE
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGSPLP-----SVFWTQEGSQVLM--F-PG-----NAYGHLHV--------TQEGTLRI 98 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~~~~-----~v~W~~~~~~~~~--~-~~-----~~~~~~~~--------~~~~~l~i 98 (292)
+..|..+.+..|++++|.|.+.+.+.+ .+.|+|++..... . .. ....+... ..+..|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 345556678889999999999876554 4899998753210 0 00 00011111 12357999
Q ss_pred ccCCCCCCeEEEEEEEeC-CcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCCee
Q psy15128 99 QGVQKEDAGFFVCSALSV-AGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNGNS 176 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~-~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~ 176 (292)
.+++.+|+|.|+|.+.+. .+.....+.|.+. ..|.....+....+..++.+.+.|.+ .+.|.+.+.|++++..
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~-----~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~ 158 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL-----AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGG 158 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCB-----BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCC
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeec-----cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcc
Confidence 999999999999998643 3333444444333 24444444555567788899999987 4678999999999877
Q ss_pred CCCCCccEEEcCCC------cEEEEeeecCCCCCC--------------------------------cceEEeCCCceEE
Q psy15128 177 LPPEDTRINVSSSG------SLQIDVLRDDFRAEP--------------------------------KDTRVASGETALL 218 (292)
Q Consensus 177 l~~~~~~~~~~~~~------~l~i~~~~~~d~g~~--------------------------------~~~~~~~g~~~~l 218 (292)
+... .......++ .|.|.....+|.|.| ....+..|+.++|
T Consensus 159 ~~~~-~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l 237 (313)
T 4fqp_A 159 MPNT-SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATL 237 (313)
T ss_dssp EEEE-EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEE
T ss_pred cccc-ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEE
Confidence 6432 122222222 255555556666611 2233456889999
Q ss_pred EeeCCCCCCCC-eEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 219 ECGPPKGQPEP-TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 219 ~C~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.|.+ .|+|.| .|.|+++|.++.. .. ... ...|.|..+...|+|.|+|.|+|..|+++.
T Consensus 238 ~C~~-~g~P~p~~v~W~~~~~~l~~--~~--~~~---------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 296 (313)
T 4fqp_A 238 TCDA-RSNPEPTGYNWSTTMGPLPP--FA--VAQ---------GAQLLIRPVDKPINTTLICNVTNALGARQA 296 (313)
T ss_dssp EEEE-EEESCCCEEEEEETTBSCCT--TE--EEE---------TTEEEECCCSSCCEEEEEEEEECSSCEEEE
T ss_pred EEEe-cCCCCCcEEEEEECCEECCC--ce--EEe---------CCEEEECcCChhhCEEEEEEEEeCCCcEEE
Confidence 9998 889988 7999999988742 11 111 126889999999999999999999998764
No 55
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=7.2e-30 Score=197.84 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=163.7
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.++|.|.+.+. +.|++++.... ........+.|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 71 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHW-------TLYSDGSSSILSTNNATFQNTGTYRCTEP 71 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSC-------EECCBTTEEEEEESSCCGGGCSCEEECCC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCce-------EEeccCceEEEEEcccccccCEEEEEEEc
Confidence 46777777888899999999999999763 99997543211 00111123589999999999999999999
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC--CceEEEeC-CeeCCCCCccEEEcCCCc
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP--PHIRWYKN-GNSLPPEDTRINVSSSGS 191 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~~W~~~-~~~l~~~~~~~~~~~~~~ 191 (292)
+..+.....+.|.|.. ++..+...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+.. ...+.....+.
T Consensus 72 n~~~~~~~~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~ 145 (292)
T 4dkd_C 72 GDPLGGSAAIHLYVKD----PARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR-HTNYSFSPWHG 145 (292)
T ss_dssp C----CCEEECCEECC----SSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS-SCCEECCSSSC
T ss_pred cCCCCcceEEEEEEcC----ccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc-CCcccccCCce
Confidence 8777666666666653 2333455566777889999999999987 44 67999997 444433 34555556667
Q ss_pred EEEEeeecCCCCCC----------------------------------cceEEeCCCceEEEeeCCCCCC-CCeEEEeEc
Q psy15128 192 LQIDVLRDDFRAEP----------------------------------KDTRVASGETALLECGPPKGQP-EPTLHWKKN 236 (292)
Q Consensus 192 l~i~~~~~~d~g~~----------------------------------~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~ 236 (292)
|.|.++..+|+|.| ....+.+|+.+.|.|.+ .+.| ++.+.|+++
T Consensus 146 L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~-~~~~~~~~~~w~~~ 224 (292)
T 4dkd_C 146 FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSA-SSVDVNFDVFLQHN 224 (292)
T ss_dssp CEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEE-EESSSCCEEECCBS
T ss_pred EEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEe-cCCCCceEEEEeCC
Confidence 88888888888821 12233589999999998 5644 467999999
Q ss_pred CeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 237 GQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
+..+..... ........ .....|.|..+..+|+|.|+|.|.|..|.++.+
T Consensus 225 ~~~~~~~~~--~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 274 (292)
T 4dkd_C 225 NTKLAIPQQ--SDFHNNRY---QKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTS 274 (292)
T ss_dssp SCCCCCCBE--EEEETTEE---EEEEEEEESSCCTTSCEEEEEEEECSSCEEEEE
T ss_pred CcccccCcc--ceecccee---eeEEEEEECccChhcCeEEEEEEecCCCCceeE
Confidence 887642222 22222211 122368899999999999999999999987643
No 56
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=6.1e-30 Score=199.78 Aligned_cols=231 Identities=15% Similarity=0.218 Sum_probs=153.1
Q ss_pred CccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEe----ec--------cCCCcceeEEe----eecEEEEccCCCCCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVL----MF--------PGNAYGHLHVT----QEGTLRIQGVQKEDA 106 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~----~~--------~~~~~~~~~~~----~~~~l~i~~~~~~d~ 106 (292)
..+.+.+|++++|.|.+.+. +.+.+.|+|++.... .. ......+.... .+..|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 35678899999999998654 445799998643211 00 01111122211 235799999999999
Q ss_pred eEEEEEEEeCC-cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCCeeCCCCCccE
Q psy15128 107 GFFVCSALSVA-GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNGNSLPPEDTRI 184 (292)
Q Consensus 107 g~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~ 184 (292)
|.|+|.+.+.. +.......+.+.. .+.+.....+.......|+.+.|.|.+ .+.|.+.+.|++++.++.......
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~ 163 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLV---EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSF 163 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEB---CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEEC
T ss_pred EEEEEEEeeCCCcceeeeeEEEeee---ccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccccee
Confidence 99999998753 3344444454443 222333344555556678999999986 678999999999998875421100
Q ss_pred ---EEcCCCcEEEEeeecCCCCCC--------------------------------cceEEeCCCceEEEeeCCCCCCCC
Q psy15128 185 ---NVSSSGSLQIDVLRDDFRAEP--------------------------------KDTRVASGETALLECGPPKGQPEP 229 (292)
Q Consensus 185 ---~~~~~~~l~i~~~~~~d~g~~--------------------------------~~~~~~~g~~~~l~C~~~~~~p~~ 229 (292)
.......|.|..+..+|.|.| ....+..|+.++|.|.+ .|.|+|
T Consensus 164 ~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~-~g~P~p 242 (308)
T 4fom_A 164 PNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNA-DANPPP 242 (308)
T ss_dssp TTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCE-EEESCE
T ss_pred eeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEE-ecCCCC
Confidence 000012466777777777611 23345678999999998 888888
Q ss_pred -eEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 230 -TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 230 -~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.+.|+|++..+... . ... ....+.|..+..+|+|.|+|.|+|.+|+++.
T Consensus 243 ~~v~W~k~~~~~~~~--~--~~~--------~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~ 292 (308)
T 4fom_A 243 FKSVWSRLDGQWPDG--L--LAS--------DNTLHFVHPLTFNYSGVYICKVTNSLGQRSD 292 (308)
T ss_dssp EEEECCBSSSCCCSS--C--BCS--------TTEEECCSCCCSCCCSEEEEEEEETTEEEEE
T ss_pred cEEEEEECCeECCCc--E--EEc--------CCeEEEECCCChhhCEEEEEEEEeCCCcEEE
Confidence 79999998877421 1 111 1224667889999999999999999998764
No 57
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.96 E-value=8.6e-28 Score=185.44 Aligned_cols=196 Identities=25% Similarity=0.477 Sum_probs=153.3
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCC-ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQ-DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 65 i~~v~~~d~G~Y~C~~~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~ 143 (284)
T 2rik_A 65 VLKVTKGDAGQYTCYASNVAGKDSCS-AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES 143 (284)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCS
T ss_pred EecCCcccCEEEEEEEEECCceEEEE-EEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCC
Confidence 67899999999999999988776555 8999999998776554 446789999999999999999999999999876321
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA 160 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 160 (292)
.............|.|.+++.+|+|.|+|.+.|..+.......|.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 144 --~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-----~p~~~~~~~~~~~~~g~~v~l~C~~ 216 (284)
T 2rik_A 144 --SKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE-----PPVFRKKPHPVETLKGADVHLECEL 216 (284)
T ss_dssp --SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-----CCBCCSCCCCEEECTTCCEEEEEEC
T ss_pred --CcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec-----CCcceeCCCcceecCCCeEEEEEEE
Confidence 111111122345899999999999999999999888777777777653 4555556666778899999999999
Q ss_pred ccCCCCceEEEeCCeeCCCCCccEEEcCC---CcEEEEeeecCCCCCCc
Q psy15128 161 VGSPPPHIRWYKNGNSLPPEDTRINVSSS---GSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 161 ~~~p~~~~~W~~~~~~l~~~~~~~~~~~~---~~l~i~~~~~~d~g~~~ 206 (292)
.+.|.+.+.|++++..+.... ++..... ..|.|.++..+|+|.|.
T Consensus 217 ~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 264 (284)
T 2rik_A 217 QGTPPFQVSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSADIGEYQ 264 (284)
T ss_dssp BSSSCCEEEEEETTEEECBTT-TEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EecCCCEEEEEECCEECcCCC-CEEEEEcCCEEEEEEcCCCcccCEEEE
Confidence 999999999999999887653 3322222 36888899888888543
No 58
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=7.1e-29 Score=198.11 Aligned_cols=223 Identities=10% Similarity=0.049 Sum_probs=157.7
Q ss_pred cEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc---------CCCcceeEEe------eecEEEEccCCCCCCeEEE
Q psy15128 46 QKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP---------GNAYGHLHVT------QEGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 46 ~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~---------~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~ 110 (292)
+.+.+|+.++|.|.+.+.|.+.+.|++++..+.... .....+.... ....|.|.+++.+|+|.|+
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 83 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEE
Confidence 467889999999999888889999999985422110 1112233222 2457999999999999999
Q ss_pred EEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCC
Q psy15128 111 CSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSG 190 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~ 190 (292)
|.+.+.. ....|.|.. +...+. ..+.+|+.++|.|.+.+.|.+.+.|++++..+ .....
T Consensus 84 C~~~n~~----~~~~l~V~~--------~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~--------~~~~~ 142 (363)
T 1wio_A 84 CEVEDQK----EEVQLLVFG--------LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN--------IQGGK 142 (363)
T ss_dssp EEETTEE----EEEEEEEEE--------EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCE--------EEESS
T ss_pred EEEEECC----CcEEEEEEe--------CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc--------cccce
Confidence 9997753 245555542 122222 35789999999999988999999999987543 22456
Q ss_pred cEEEEeeecCCCCCC--------------------------cceEEeCCCceEEEeeCCCC-----CCCCeEEEeEcCeE
Q psy15128 191 SLQIDVLRDDFRAEP--------------------------KDTRVASGETALLECGPPKG-----QPEPTLHWKKNGQF 239 (292)
Q Consensus 191 ~l~i~~~~~~d~g~~--------------------------~~~~~~~g~~~~l~C~~~~~-----~p~~~~~W~~~g~~ 239 (292)
.|.|.++..+|+|.| ....+.+|+.+.|.|.+ .+ .|.+.+.|+++|..
T Consensus 143 ~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~-~~~~~~~~P~p~i~W~~~g~~ 221 (363)
T 1wio_A 143 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPL-AFTVEKLTGSGELWWQAERAS 221 (363)
T ss_dssp EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCC-CCCCCSSCEEEEEEEEESSCC
T ss_pred EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEE-ecccccCCCceeEEEecCCCC
Confidence 888888988888832 33457789999999987 56 78899999999988
Q ss_pred eccC------CCceEEecCCC---cc--ccccccccccccccccccceeEEEEeec--cccccc
Q psy15128 240 IDLE------SSKRVSILGDP---WF--DSRRSRSIFGSVLGALSDDQWKLIAKNI--RNQQQH 290 (292)
Q Consensus 240 ~~~~------~~~~~~~~~~~---~~--~~~~~~~l~i~~~~~~~~g~y~C~a~n~--~g~~~~ 290 (292)
+... .+.++.+.... .. .......|.|..+..+|+|.|+|.|.|. .|..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~ 285 (363)
T 1wio_A 222 SSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQ 285 (363)
T ss_dssp CCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEE
T ss_pred ccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEE
Confidence 7531 12222221100 00 0011236889999999999999999999 886543
No 59
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=8.9e-28 Score=189.39 Aligned_cols=234 Identities=15% Similarity=0.227 Sum_probs=155.4
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeee----CCCeeEEEECC--eEEe--e--------ccCCCcceeEEe----eecEEE
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGS----PLPSVFWTQEG--SQVL--M--------FPGNAYGHLHVT----QEGTLR 97 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~v~W~~~~--~~~~--~--------~~~~~~~~~~~~----~~~~l~ 97 (292)
.+...+....+.+|+.++|.|.+.+. +.+.+.|++++ .... . .......+..+. .+..|.
T Consensus 16 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 95 (331)
T 3u83_A 16 QVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIR 95 (331)
T ss_dssp -----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEE
T ss_pred ceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEE
Confidence 34445667789999999999998775 44479999953 2110 0 001111223221 345799
Q ss_pred EccCCCCCCeEEEEEE-EeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCC---CeEEEEeE-eccCCCCceEEEe
Q psy15128 98 IQGVQKEDAGFFVCSA-LSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLH---SVAFLPCQ-AVGSPPPHIRWYK 172 (292)
Q Consensus 98 i~~~~~~d~g~Y~C~~-~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g---~~v~l~C~-~~~~p~~~~~W~~ 172 (292)
|.+++.+|+|.|+|.+ .+..+.......|.|.. .+...+...+....+.+| +.+.|.|. +.+.|.+.+.|++
T Consensus 96 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~---~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 96 LSRLELEDEGVYICEFATFPTGNRESQLNLTVMA---KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB---CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EcccCcccCcEEEEEEEecCCCccEEEEEEEEec---CCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 9999999999999984 45556555566666653 122222335566667888 88999998 7888999999999
Q ss_pred CCeeCCCCCccEEEcCCC------cEEEEeeecCCCCCC------------------------------cceEEeCCCce
Q psy15128 173 NGNSLPPEDTRINVSSSG------SLQIDVLRDDFRAEP------------------------------KDTRVASGETA 216 (292)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~------~l~i~~~~~~d~g~~------------------------------~~~~~~~g~~~ 216 (292)
++..... .......++ .|.|..+..+|+|.| ....+.+|+.+
T Consensus 173 ~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~ 250 (331)
T 3u83_A 173 RLKGEAE--YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDV 250 (331)
T ss_dssp SSCCEEE--EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCE
T ss_pred CCCCccc--cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeE
Confidence 6322111 111112233 355555678888822 22336679999
Q ss_pred EEEeeCCCCCCCCe-EEEeEcCeEeccCCCceEEecCCCccccccccccccc-cccccccceeEEEEeeccccccc
Q psy15128 217 LLECGPPKGQPEPT-LHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGS-VLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 217 ~l~C~~~~~~p~~~-~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.|.|.+ .+.|.+. +.|++++..+.. . .... ...|.|. .+..+|+|.|+|.|+|..|.++.
T Consensus 251 ~l~C~~-~g~p~p~~i~W~~~~~~~~~--~--~~~~---------~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~ 312 (331)
T 3u83_A 251 KLTCKA-DANPPATEYHWTTLNGSLPK--G--VEAQ---------NRTLFFKGPINYSLAGTYICEATNPIGTRSG 312 (331)
T ss_dssp EEEEEE-EEESCCCEEEEEETTBSCCT--T--EEEE---------TTEEEECSCCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEeC-cCCCCCCEEEEEECCCcccc--c--ceec---------CcEEEEeCCCccccCeEEEEEEEeccccceE
Confidence 999998 8899997 999999987742 1 1111 1258888 89999999999999999998754
No 60
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=1.6e-28 Score=192.38 Aligned_cols=237 Identities=13% Similarity=0.142 Sum_probs=151.6
Q ss_pred EEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeE
Q psy15128 29 ALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 29 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 108 (292)
+...+..+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|++..+... .......+.|.|.+++.+|+|.
T Consensus 17 ~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~------~~~~~~~~~L~I~~v~~~D~G~ 88 (316)
T 3vh8_G 17 SHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI------FHGRIFQESFNMSPVTTAHAGN 88 (316)
T ss_dssp -------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH------HHHCCBSSCEEECSCCGGGCEE
T ss_pred cccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee------ecCCcceEEEEECCCCcccCeE
Confidence 4455566788887776 578899999999999876 6789999998754210 0111235689999999999999
Q ss_pred EEEEEEeCCc-----CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCcc
Q psy15128 109 FVCSALSVAG-----STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTR 183 (292)
Q Consensus 109 Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~ 183 (292)
|+|.+.+..+ .......|.|. ...++|.+...+... +.+|+.++|.|.+. .+++.+.|++++..+......
T Consensus 89 Y~C~a~~~~~~~~~~~~s~~~~l~V~--~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~ 164 (316)
T 3vh8_G 89 YTCRGSHPHSPTGWSAPSNPVVIMVT--GNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLV 164 (316)
T ss_dssp EEEEEBCSSSSSSBCCCCCCEEEEEE--CSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEE
T ss_pred EEEEEEcCCCCcceecCCCcEEEEEe--cCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceee
Confidence 9999985322 12233444443 333456666555544 88999999999994 456789999999877542111
Q ss_pred EEE---cCCCcEEEEeeecCCCCCC------------------------------------cceEEeCCCceEEEeeCCC
Q psy15128 184 INV---SSSGSLQIDVLRDDFRAEP------------------------------------KDTRVASGETALLECGPPK 224 (292)
Q Consensus 184 ~~~---~~~~~l~i~~~~~~d~g~~------------------------------------~~~~~~~g~~~~l~C~~~~ 224 (292)
... ...+.|.|.++..+|+|.| +...+.+|+.++|.|.+ .
T Consensus 165 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~ 243 (316)
T 3vh8_G 165 GQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSS-R 243 (316)
T ss_dssp CEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEE-S
T ss_pred eeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEEC-C
Confidence 111 1234678888888877721 01134579999999998 4
Q ss_pred CCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccc
Q psy15128 225 GQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 225 ~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
.|.+.|.|+++|..+... ........+ .....|.|..+. |+|.|+|.|.|..+.
T Consensus 244 -~~~~~~~W~k~g~~~~~~--~~~~~~~~~----~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 244 -SSYDMYHLSREGGAHERR--LPAVRKVNR----TFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp -SCCSEEEEEETTSSCCEE--EECEECTTS----CEEEEEECC-------CEEEEEEEBTTBT
T ss_pred -CCCcEEEEEECCCcCCCc--eeceeccCC----ceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 477899999999876311 111111111 112357888888 999999999998774
No 61
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=183.97 Aligned_cols=199 Identities=21% Similarity=0.346 Sum_probs=148.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 64 i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 143 (291)
T 2wim_A 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIS 143 (291)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCC
T ss_pred EccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccC
Confidence 67899999999999999988776555588899888888777778889999999999999998999999999987664221
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCC--CceecCCCeEEEEeE
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPS--NQTLPLHSVAFLPCQ 159 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~--~~~~~~g~~v~l~C~ 159 (292)
..+.....++.|.|.+++.+|.|.|+|.+.+..+.......+.+.+.. +|.+...+. ...+.+|+.+.|.|.
T Consensus 144 ---~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~ 217 (291)
T 2wim_A 144 ---DNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV---PPAISMPQKSFNATAERGEEMTFSCR 217 (291)
T ss_dssp ---CSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB---CCCCBCSCSEEECCSSSCCEEEEECB
T ss_pred ---CceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc---CCccccCcccccceecCCCeEEEEEE
Confidence 223334446689999999999999999999877554433333333221 233322222 335678999999999
Q ss_pred eccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCc
Q psy15128 160 AVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 160 ~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~ 206 (292)
+.+.|.+.+.|++++..+............+.|.|.++..+|+|.|.
T Consensus 218 ~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 264 (291)
T 2wim_A 218 ASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYV 264 (291)
T ss_dssp CCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEE
T ss_pred eecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEE
Confidence 99999999999999999877543322334568999999999988553
No 62
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=3.4e-27 Score=182.74 Aligned_cols=197 Identities=25% Similarity=0.393 Sum_probs=151.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 66 i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~- 144 (291)
T 1qz1_A 66 IYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK- 144 (291)
T ss_dssp ECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTT-
T ss_pred EecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccC-
Confidence 6789999999999999998765555558899999998888888888999999999999999999999999998765321
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE--EEEEEEEeecCCCCCeEEeCCC--CceecCCCeEEEE
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV--RAFLQVTSVEDTPPPIVQVGPS--NQTLPLHSVAFLP 157 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~--~~~l~v~~~~~~~~~~~~~~~~--~~~~~~g~~v~l~ 157 (292)
...+.....++.|.|.+++.+|+|.|+|.+.+..+.... ...+.+.. +|.+...+. ...+..|+.+.|.
T Consensus 145 --~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~-----~p~~~~~~~~~~~~~~~g~~v~l~ 217 (291)
T 1qz1_A 145 --KDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV-----PPTVQARQSIVNATANLGQSVTLV 217 (291)
T ss_dssp --CCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE-----EEEEEESCSEEEEETTSCCCEEEE
T ss_pred --CCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec-----CCcccccccccccccccCceEEEE
Confidence 122233344568999999999999999999987654433 33444432 334443322 3456789999999
Q ss_pred eEeccCCCCceEEEeCCeeCCCCC---ccEEEcCC-CcEEEEeeecCCCCCCc
Q psy15128 158 CQAVGSPPPHIRWYKNGNSLPPED---TRINVSSS-GSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 158 C~~~~~p~~~~~W~~~~~~l~~~~---~~~~~~~~-~~l~i~~~~~~d~g~~~ 206 (292)
|.+.+.|.|.+.|++++..+.... .++..... ..|.|.++..+|+|.|.
T Consensus 218 C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 270 (291)
T 1qz1_A 218 CDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYV 270 (291)
T ss_dssp EEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEE
T ss_pred EEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEE
Confidence 999999999999999999987653 24444443 46999999999988553
No 63
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=9.4e-28 Score=183.32 Aligned_cols=201 Identities=15% Similarity=0.231 Sum_probs=141.3
Q ss_pred cEEecCCcEEEEEEEee-eCCC--eeEEEECCeEEeeccCCCcceeEEeeecEEEEccC---CCCCCeE--EEEEEEeCC
Q psy15128 46 QKVGLNGIASFQCVAEG-SPLP--SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGV---QKEDAGF--FVCSALSVA 117 (292)
Q Consensus 46 ~~~~~g~~~~l~C~~~~-~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~g~--Y~C~~~~~~ 117 (292)
..+.+|+.++|.|.+.+ .|.+ .+.|++++..+.. .. ......+.+..+ +..|.|. |+|.+.|..
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~-------~~-~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~ 84 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-------TV-TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGN 84 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC-------EE-EECSSEEEEEEEEEECGGGCEEEEEEEEEEETT
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc-------eE-eeCCCeEEEEeecccccccCCcceEEEEEecCC
Confidence 46889999999999998 6766 9999999987631 11 122335555544 7778874 999999988
Q ss_pred cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEee
Q psy15128 118 GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVL 197 (292)
Q Consensus 118 ~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~ 197 (292)
+.......|.|.. .+++.+.. ....+.+|+.+.|.|.+. |.+.+.| +|..+..... .+.|.|..+
T Consensus 85 ~~~~~~~~l~V~~---~p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~------~~~l~i~~~ 149 (265)
T 2oz4_A 85 QSQETLQTVTIYS---FPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGP------RAQLLLKAT 149 (265)
T ss_dssp EEEEEEEEEEEEC---CCCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSS------EECCEEECC
T ss_pred CCcEEEEEEEEeC---CCCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCC------cEEEEEccc
Confidence 8776667777653 23344443 455678899999999987 8899999 7777743211 012222222
Q ss_pred ecCCCC-----------------------------------CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEecc
Q psy15128 198 RDDFRA-----------------------------------EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDL 242 (292)
Q Consensus 198 ~~~d~g-----------------------------------~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 242 (292)
..+|.| .+....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+.
T Consensus 150 ~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~-~g~P~p~i~W~~~~~~~~- 227 (265)
T 2oz4_A 150 PEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA-WGNPLPELKCLKDGTFPL- 227 (265)
T ss_dssp GGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCC-EEESCCEEEEEETTTEEC-
T ss_pred cccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeEC-ccCCCCeEEEEECCcccC-
Confidence 222222 2345678899999999998 899999999999987321
Q ss_pred CCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 243 ESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..+ .+..+..+|+|.|+|.|.|..|.++.
T Consensus 228 ---------~~g----------~~~~v~~~d~G~Y~C~a~N~~G~~~~ 256 (265)
T 2oz4_A 228 ---------PIG----------ESVTVTRDLEGTYLCRARSTQGEVTR 256 (265)
T ss_dssp ---------CTT----------SCEECCGGGCEEEEEEEEETTEEEEE
T ss_pred ---------CCC----------cEEEeehhhCeEEEEEEECCCCcEEE
Confidence 111 11236778999999999999998764
No 64
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=4.6e-26 Score=189.37 Aligned_cols=283 Identities=17% Similarity=0.155 Sum_probs=167.4
Q ss_pred cccCCcCCCeeEEEEEEeccc----------c--cccccEEEEEeC----CCcEEe-CCCccEEecCCcEEEEEEEeee-
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG----------E--RETKPALLTVHA----PPSFVV-RPQDQKVGLNGIASFQCVAEGS- 63 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~----------~--~~~~~~~l~v~~----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~- 63 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+.. .+.......++.++|.|.+.+.
T Consensus 84 I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~ 163 (512)
T 1zvo_C 84 LRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYH 163 (512)
T ss_pred ECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeee
Confidence 789999999999999987642 1 122336788763 343332 2211102346899999999886
Q ss_pred CCC-eeEEEECCeEEeec--cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEE-----------EEEEE
Q psy15128 64 PLP-SVFWTQEGSQVLMF--PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA-----------FLQVT 129 (292)
Q Consensus 64 ~~~-~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~-----------~l~v~ 129 (292)
|.+ .+.|++++...... .........+...+.|.|.....+ .|.|+|.+.|..+...... .+.+.
T Consensus 164 P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~ 242 (512)
T 1zvo_C 164 PTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPT 242 (512)
T ss_pred cCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEe
Confidence 665 89999965421100 000000111223346889888877 8999999999877655443 22222
Q ss_pred eec-----------------------------------------------CCCCCeE-EeCCCCceecCCCeEEEEeEec
Q psy15128 130 SVE-----------------------------------------------DTPPPIV-QVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 130 ~~~-----------------------------------------------~~~~~~~-~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
+.. ...+|.+ ...+....+..|+.++|.|.+.
T Consensus 243 ~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~ 322 (512)
T 1zvo_C 243 AQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVV 322 (512)
T ss_pred CCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEe
Confidence 100 0012233 3344444566899999999998
Q ss_pred cCCC--CceEEEeCCeeCCCCC--ccEEEcCCC------cEEEEeeecCCCCCC--------------------------
Q psy15128 162 GSPP--PHIRWYKNGNSLPPED--TRINVSSSG------SLQIDVLRDDFRAEP-------------------------- 205 (292)
Q Consensus 162 ~~p~--~~~~W~~~~~~l~~~~--~~~~~~~~~------~l~i~~~~~~d~g~~-------------------------- 205 (292)
++++ ..+.|+++|..+.... .......++ .|.|..+..+|.|.|
T Consensus 323 g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~~~~~~~~~~~~ 402 (512)
T 1zvo_C 323 GSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQAPV 402 (512)
T ss_pred ceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCCceeEEeecCCCCCC
Confidence 8733 3799999998865211 111112233 255555555555511
Q ss_pred -cceEEe----CCCceE-EEeeCCCC-CCCC-eEEEeEcCeEeccCCCc--eEEecCCCc-ccccccccccccccccccc
Q psy15128 206 -KDTRVA----SGETAL-LECGPPKG-QPEP-TLHWKKNGQFIDLESSK--RVSILGDPW-FDSRRSRSIFGSVLGALSD 274 (292)
Q Consensus 206 -~~~~~~----~g~~~~-l~C~~~~~-~p~~-~~~W~~~g~~~~~~~~~--~~~~~~~~~-~~~~~~~~l~i~~~~~~~~ 274 (292)
+.+.+. .|+.+. |.|.+ .| +|+. .+.|+++|+++...... ......++. +. ....|.+......|.
T Consensus 403 ~p~v~~~~~~~~~~~~~~L~C~~-~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~--~~s~L~v~~~~~~~~ 479 (512)
T 1zvo_C 403 KLSLNLLASSDPPEAASWLLCEV-SGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFW--AWSVLRVPAPPSPQP 479 (512)
T ss_pred CCEEEEEccCcCCCCceEEEEEE-eeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEE--EEEEEEECchhcCCC
Confidence 111122 378899 99999 55 5543 78999999998532111 122233332 22 222455666666679
Q ss_pred ceeEEEEeeccccc
Q psy15128 275 DQWKLIAKNIRNQQ 288 (292)
Q Consensus 275 g~y~C~a~n~~g~~ 288 (292)
|.|+|+|.|.....
T Consensus 480 g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 480 ATYTCVVSHEDSRT 493 (512)
T ss_pred CeEEEEEEecCCCC
Confidence 99999999987654
No 65
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=185.42 Aligned_cols=234 Identities=13% Similarity=0.134 Sum_probs=143.4
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE----eeecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV----TQEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
......+.+|+.++|.|.+.+. +.|++++..+.. +... ...+.|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~-------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 6 PGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ-------EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp SCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE-------EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred CCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc-------ceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 3445678899999999998763 999999876520 1111 113589999999999999999999877
Q ss_pred cC-eeEEEEEEEEeecCCCCCeEEeCCCC--ceecCCCeEEEEeEeccCCCCceEEEeCC--eeCCCC---Ccc-EEEcC
Q psy15128 118 GS-TTVRAFLQVTSVEDTPPPIVQVGPSN--QTLPLHSVAFLPCQAVGSPPPHIRWYKNG--NSLPPE---DTR-INVSS 188 (292)
Q Consensus 118 ~~-~~~~~~l~v~~~~~~~~~~~~~~~~~--~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~l~~~---~~~-~~~~~ 188 (292)
|. ......+.+.+.. ...+.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++ .++... ... .....
T Consensus 75 g~~~~~~~~~~v~v~~-p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d 152 (289)
T 3mjg_X 75 GLETDERKRLYIFVPD-PTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFSGIFE 152 (289)
T ss_dssp ----CCCEEEEEECCC-TTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEEECCC
T ss_pred CCCcCcEEeEEEEEEC-CCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCeeeecc
Confidence 64 2223344444321 111222111111 4578999999999998 677889998864 333211 011 11122
Q ss_pred CCcEEEEeeec-------------CCCC------CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEE
Q psy15128 189 SGSLQIDVLRD-------------DFRA------EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVS 249 (292)
Q Consensus 189 ~~~l~i~~~~~-------------~d~g------~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~ 249 (292)
.|.+.+..... .... .+....+.+|+.+.|.|.+ .+.|.+.+.|+++++...........
T Consensus 153 ~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~ 231 (289)
T 3mjg_X 153 DRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIV-IGNEVVNFEWTYPRKESGRLVEPVTD 231 (289)
T ss_dssp SSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEE-ESCSSBEEEEECTTSSSSCCCCCEEE
T ss_pred CcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEE-CCCCCcceEEEcCCccCCCccccccc
Confidence 23333322100 0000 1133567899999999998 78999999999887654211111111
Q ss_pred ecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 250 ILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 250 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
..... .......|.|..+..+|+|.|+|.|.|..|.++.+
T Consensus 232 ~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 271 (289)
T 3mjg_X 232 FLLDM--PYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDE 271 (289)
T ss_dssp ESCTT--TTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEE
T ss_pred ccCCc--ceEEEEEEEEcccChhhCcEEEEEeecCCCCceeE
Confidence 11110 11233479999999999999999999999998754
No 66
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=2.4e-27 Score=193.99 Aligned_cols=242 Identities=16% Similarity=0.213 Sum_probs=157.3
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCC----CeeEEEECC--eEEe--ecc-----CCCcceeEEe---eecEEEEccCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPL----PSVFWTQEG--SQVL--MFP-----GNAYGHLHVT---QEGTLRIQGVQ 102 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~----~~v~W~~~~--~~~~--~~~-----~~~~~~~~~~---~~~~l~i~~~~ 102 (292)
+...|..+.+.+|+.++|.|.+.+.+. +.+.|+|++ ..+. ... .....+.... ....|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 334466778899999999999987765 489999963 2111 100 0111222222 23479999999
Q ss_pred CCCCeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCeeCCC
Q psy15128 103 KEDAGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNSLPP 179 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~l~~ 179 (292)
.+|+|.|+|.+.+..+.. .....+.|.. ...+|.+...+.......|+.+.|.|.+.+ .|.+ .+.|+++|.++..
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 161 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 161 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECC--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecC--CCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCC
Confidence 999999999999876532 2234455532 222455554333334456889999999977 5666 8999999998866
Q ss_pred CC-ccEEE--cC------CCcEEEEeeecCCCCCC-----------------------------cceEEeCCCceEEEee
Q psy15128 180 ED-TRINV--SS------SGSLQIDVLRDDFRAEP-----------------------------KDTRVASGETALLECG 221 (292)
Q Consensus 180 ~~-~~~~~--~~------~~~l~i~~~~~~d~g~~-----------------------------~~~~~~~g~~~~l~C~ 221 (292)
.. ..... .. .+.|.|.++..+|+|.| ....+.+|+.++|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 241 (438)
T 1qgc_4 162 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCT 241 (438)
T ss_dssp TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEE
T ss_pred CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEE
Confidence 41 11111 11 12578888888888821 3445779999999999
Q ss_pred CCCCCC--CCeEEEeEc--CeEecc----C-----------CCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 222 PPKGQP--EPTLHWKKN--GQFIDL----E-----------SSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 222 ~~~~~p--~~~~~W~~~--g~~~~~----~-----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
+ .+.| .+.+.|+++ |+.+.. . ...++.+..+.. .....|.|..+..+|+|.|+|.|.
T Consensus 242 ~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~ 317 (438)
T 1qgc_4 242 A-SGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNA---KNTLYLQMSSLRSADTAMYYCVRR 317 (438)
T ss_dssp E-ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETT---TTEEEEEECSCCGGGCCEEEEEEC
T ss_pred E-cccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecC---CCeEEEEECCCChhhCEEEEEEEE
Confidence 8 7777 679999996 544320 0 011222211100 112368999999999999999999
Q ss_pred eccc
Q psy15128 283 NIRN 286 (292)
Q Consensus 283 n~~g 286 (292)
|..|
T Consensus 318 n~~~ 321 (438)
T 1qgc_4 318 EDGG 321 (438)
T ss_dssp CSSS
T ss_pred ccCC
Confidence 9554
No 67
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.95 E-value=4.4e-26 Score=177.59 Aligned_cols=174 Identities=30% Similarity=0.484 Sum_probs=137.6
Q ss_pred cccCCc-CCCeeEEEEEEecccccccccEEEEEeCC-------CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC
Q psy15128 2 ITEVKK-SDEGKYQCYVQNMVGERETKPALLTVHAP-------PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE 73 (292)
Q Consensus 2 i~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~ 73 (292)
|.+++. +|+|.|+|.+.|..|..... +.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++
T Consensus 67 i~~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~ 145 (304)
T 2yd9_A 67 IQPLRTPRDENVYECVAQNSVGEITVH-AKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKD 145 (304)
T ss_dssp ECSCCTTTTCSEEEEEEECSSCEECCE-EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEET
T ss_pred EecccccCCCeEEEEEEECCCCeEEEE-EEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEEC
Confidence 678887 99999999999988875555 88998764 6677777778899999999999999999999999999
Q ss_pred CeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE-EEEEEEeecCCCCCeEEeCCCCceecCCC
Q psy15128 74 GSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVTSVEDTPPPIVQVGPSNQTLPLHS 152 (292)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~g~ 152 (292)
+..+.... ...+.....++.|.|.+++.+|+|.|+|.+.|..+..... ..+.+.+. ..+|.+...+....+.+|+
T Consensus 146 ~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~--~~~P~~~~~~~~~~v~~G~ 221 (304)
T 2yd9_A 146 FLPVDPSA--SNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ--NVAPRFSILPMSHEIMPGG 221 (304)
T ss_dssp TEECCGGG--GTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC--CEEEEEEECCCCBCCCTTC
T ss_pred CEECcCCC--CcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee--ccCCcEEecCCceEEcCCC
Confidence 98764221 1122333445689999999999999999999987754432 44554321 2356666677777789999
Q ss_pred eEEEEeEeccCCCCceEEEeCCeeCCCC
Q psy15128 153 VAFLPCQAVGSPPPHIRWYKNGNSLPPE 180 (292)
Q Consensus 153 ~v~l~C~~~~~p~~~~~W~~~~~~l~~~ 180 (292)
.+.|.|.+.+.|.|.+.|++++..+...
T Consensus 222 ~v~l~C~~~g~p~p~v~W~~~~~~l~~~ 249 (304)
T 2yd9_A 222 NVNITCVAVGSPMPYVKWMQGAEDLTPE 249 (304)
T ss_dssp CEEEEEEEEEESCCEEEEEETTEECSCS
T ss_pred eEEEEEEEeeeCCCEEEEEECCEECCCc
Confidence 9999999999999999999999988764
No 68
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=180.47 Aligned_cols=245 Identities=19% Similarity=0.194 Sum_probs=156.7
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE--eeecEEEEccCCCCCCeEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV--TQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
.+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.... .. ..... .....|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~-~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG-LK-YRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS-SS-EEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC-Ce-EEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 46788888888999999999999999999999999999998764211 11 11111 1123899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEc---CC
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVS---SS 189 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~---~~ 189 (292)
+.|..+.......|.|........+.....+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++... ..
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~ 159 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG-HYQVIVTRSF 159 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSS-SCEEEECSSE
T ss_pred EEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCC-cEEEEEcCCc
Confidence 999888776677777654221111111122345567889999999999999999999999998887543 22222 23
Q ss_pred CcEEEEe-eecCCCCCCcce--------------------------EE--eCCCceEEEeeCCCCC-CCCeEEEeEcCeE
Q psy15128 190 GSLQIDV-LRDDFRAEPKDT--------------------------RV--ASGETALLECGPPKGQ-PEPTLHWKKNGQF 239 (292)
Q Consensus 190 ~~l~i~~-~~~~d~g~~~~~--------------------------~~--~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~ 239 (292)
..|.|.+ +..+|.|.|... .+ ..+..+.|.|...... ..+.+.+.....+
T Consensus 160 ~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~ 239 (305)
T 2nzi_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCA 239 (305)
T ss_dssp EEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEE
T ss_pred eEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEec
Confidence 4688888 899999944111 11 1233444444420000 0011111111111
Q ss_pred eccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 240 IDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
. .......... .....+.|..+...+.|.|+|.|.|..|....
T Consensus 240 ~---~~~~w~~~~~-----~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~ 282 (305)
T 2nzi_A 240 T---TAERWLRVGQ-----ARETRYTVINLFGKTSYQFRVIAENKFGLSKP 282 (305)
T ss_dssp T---TSCCEEEEEE-----ESSSEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred C---CCCccEECcc-----ccCceEEecCCCCCCeEEEEEEEEeCCcccCC
Confidence 1 0011100000 11235778899999999999999999998754
No 69
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.94 E-value=1.7e-24 Score=174.45 Aligned_cols=236 Identities=20% Similarity=0.285 Sum_probs=163.2
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC--CeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEE
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE--GSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C 111 (292)
|.+.. +....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.........+.... ..+.|.|.+++.+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 45554 5567788899999999999999999999999 766532111112233332 34689999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCC-ccEEEcC--
Q psy15128 112 SALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPED-TRINVSS-- 188 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~-~~~~~~~-- 188 (292)
.+.|..|.....+.|.|.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .++....
T Consensus 81 ~a~n~~g~~~~~~~l~V~~-----~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~ 155 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEY-----APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTG 155 (389)
T ss_dssp EEECSSCEEEEEEEEEEEE-----EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECS
T ss_pred EEEeCCCCcceEEEEEEEe-----CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccC
Confidence 9999988877777777764 4444444444467899999999999999999999999999987643 2333332
Q ss_pred -CCcEEEEeeecCCCCCC-------------------------c-ceE--EeCCCceEEEeeCC---CCCCCC--eEEEe
Q psy15128 189 -SGSLQIDVLRDDFRAEP-------------------------K-DTR--VASGETALLECGPP---KGQPEP--TLHWK 234 (292)
Q Consensus 189 -~~~l~i~~~~~~d~g~~-------------------------~-~~~--~~~g~~~~l~C~~~---~~~p~~--~~~W~ 234 (292)
...|.|.++..+|+|.| + ... ...+..+.|.|... .+.|.. .+.|.
T Consensus 156 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~ 235 (389)
T 2jll_A 156 RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK 235 (389)
T ss_dssp SCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEE
T ss_pred CEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEE
Confidence 23699999999999932 1 111 12356778888631 122322 46677
Q ss_pred EcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 235 KNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 235 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+++... ....... .....+.|..+...+.+.|+|.|.|..|...
T Consensus 236 ~~~~~~------~~~~~~~-----~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~ 279 (389)
T 2jll_A 236 EVASEI------WKIVRSH-----GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGD 279 (389)
T ss_dssp ETTCSC------CEEEECS-----TTCSEEEECSCCTTCEEEEEEEEEESSCBCC
T ss_pred ECCCcc------cEEeecc-----CCcceEEECCccCCCEEEEEEEEEcCCccCC
Confidence 665321 0111111 1123577888999999999999999999754
No 70
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=1.1e-25 Score=177.20 Aligned_cols=200 Identities=14% Similarity=0.182 Sum_probs=140.0
Q ss_pred cccCCcCCCe-eEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeC-CCeeEEEECCeEEee
Q psy15128 2 ITEVKKSDEG-KYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSP-LPSVFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~ 79 (292)
|.+++.+|+| .|+|.+.+..|......+.+.+..+|.+........+.+|+.+.|.|.+.+.| .+.+.|++++..+..
T Consensus 93 i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~ 172 (329)
T 3oq3_B 93 IANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELII 172 (329)
T ss_dssp ESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCC
T ss_pred EcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCC
Confidence 6789999999 99999999887644442334455555544333334466799999999999988 899999999987631
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeC--CcCeeEE----EEEEEEeecCCCCCeEEeCCCCceecCCCe
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSV--AGSTTVR----AFLQVTSVEDTPPPIVQVGPSNQTLPLHSV 153 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~--~~~~~~~----~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (292)
. ..+.... ++.|.|.+++.+|+|.|+|.+.|. .+..... ..|.|.. ........+.+....+.+|+.
T Consensus 173 ~----~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~--~~~~~~~~~~~~~~~v~~G~~ 245 (329)
T 3oq3_B 173 D----GTKYSQS-GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIP--SQDHRFKLILDPKINVTIGEP 245 (329)
T ss_dssp S----SSSEEEE-TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEEC--CCCCCEEEECCSEEEECTTSC
T ss_pred C----CceEecC-CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEEC--CCCCCCceecCCeeEEecCCC
Confidence 1 1122222 679999999999999999999986 5444333 4444432 111111222566677899999
Q ss_pred EEEEeEeccCC---CC-ceEEEeCCeeCCCCCccEEEc-------CCCcEEEEeeecCCCC-CCcce
Q psy15128 154 AFLPCQAVGSP---PP-HIRWYKNGNSLPPEDTRINVS-------SSGSLQIDVLRDDFRA-EPKDT 208 (292)
Q Consensus 154 v~l~C~~~~~p---~~-~~~W~~~~~~l~~~~~~~~~~-------~~~~l~i~~~~~~d~g-~~~~~ 208 (292)
+.|.|.+.+.| .+ .+.|++++..+.......... ..+.|.|.++..+|+| .|...
T Consensus 246 ~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~ 312 (329)
T 3oq3_B 246 ANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCR 312 (329)
T ss_dssp EEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEE
T ss_pred EEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEE
Confidence 99999999987 66 789999998854333322221 2357899999999988 66433
No 71
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.94 E-value=9.9e-25 Score=160.96 Aligned_cols=179 Identities=28% Similarity=0.521 Sum_probs=122.4
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe----eecEEEEccCCC-CCCeEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT----QEGTLRIQGVQK-EDAGFF 109 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~-~d~g~Y 109 (292)
.+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. ...+.... ....|.|.+++. +|+|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~----~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y 80 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSG----TQSRYTVLEQPGGISILRIEPVRAGRDDAPY 80 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCT----TSTTEEEEEETTTEEEEEESSCCTTTTCSEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCC----CcceeEEEEcCCCeEEEEEEecCCCCcCceE
Confidence 478888888889999999999999999999999999999987631 11122221 125899999999 999999
Q ss_pred EEEEEeCCcC-eeEEEEEEEEeecCCC--CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEE
Q psy15128 110 VCSALSVAGS-TTVRAFLQVTSVEDTP--PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINV 186 (292)
Q Consensus 110 ~C~~~~~~~~-~~~~~~l~v~~~~~~~--~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~ 186 (292)
+|.+.|..+. ......|.|......+ .|.+...+...
T Consensus 81 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~---------------------------------------- 120 (212)
T 2yd1_A 81 ECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTR---------------------------------------- 120 (212)
T ss_dssp EEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCE----------------------------------------
T ss_pred EEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCce----------------------------------------
Confidence 9999998877 5566666665321111 02222222222
Q ss_pred cCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccc
Q psy15128 187 SSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFG 266 (292)
Q Consensus 187 ~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 266 (292)
.+..|+.+.|.|.+ .+.|.+.+.|++++..+... ..++..... .|.|
T Consensus 121 ----------------------~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~---------~L~i 167 (212)
T 2yd1_A 121 ----------------------VIEVGHTVLMTCKA-IGNPTPNIYWIKNQTKVDMS-NPRYSLKDG---------FLQI 167 (212)
T ss_dssp ----------------------EEETTCCEEECCEE-ECSSCCEEEEEETTEECCTT-STTEEEETT---------EEEE
T ss_pred ----------------------EeecCCeEEEEEEe-ccCCCCeEEEEECCeEcccC-CCeEEccCC---------eEEE
Confidence 34456666666666 56666666666666665421 122222111 5778
Q ss_pred ccccccccceeEEEEeeccccccc
Q psy15128 267 SVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 267 ~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..+...|+|.|+|.|.|..|....
T Consensus 168 ~~v~~~d~G~Y~C~a~N~~G~~~s 191 (212)
T 2yd1_A 168 ENSREEDQGKYECVAENSMGTEHS 191 (212)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ccCChhhCEEEEEEeecCCCceeE
Confidence 889999999999999999998854
No 72
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.94 E-value=3.2e-24 Score=158.18 Aligned_cols=186 Identities=25% Similarity=0.467 Sum_probs=118.8
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE--eeecEEEEccC-CCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV--TQEGTLRIQGV-QKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~-~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ........ .....|.|.++ +.+|+|.|+|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSN---QRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC---TTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCC---CceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 467788888888999999999999999999999999999987631 11111111 12347999999 5999999999
Q ss_pred EEEeCCcCeeEEEEEEEEeecCCC--CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC
Q psy15128 112 SALSVAGSTTVRAFLQVTSVEDTP--PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS 189 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~ 189 (292)
.+.|..+.......|.|......+ .|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~---------------- 145 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKD---------------- 145 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET----------------
T ss_pred EEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEEC----------------
Confidence 999988776666666665321111 13333333334444455555555554444444555554
Q ss_pred CcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCC-CceEEecCCCcccccccccccccc
Q psy15128 190 GSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLES-SKRVSILGDPWFDSRRSRSIFGSV 268 (292)
Q Consensus 190 ~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~ 268 (292)
|..+.... ..++..... .....|.|..
T Consensus 146 -----------------------------------------------g~~l~~~~~~~~~~~~~~-----~~~~~L~i~~ 173 (212)
T 2yd6_A 146 -----------------------------------------------FLPVDTSNNNGRIKQLRS-----ESIGALQIEQ 173 (212)
T ss_dssp -----------------------------------------------TEEC------CCEEEEEE-----TTEEEEEECS
T ss_pred -----------------------------------------------CccccCcCCCceEEEEec-----CCeEEEEEcC
Confidence 44442111 111111110 0112577888
Q ss_pred ccccccceeEEEEeecccccccC
Q psy15128 269 LGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 269 ~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
+..+|+|.|+|.|+|..|.+..+
T Consensus 174 ~~~~d~G~Y~C~a~N~~G~~~s~ 196 (212)
T 2yd6_A 174 SEESDQGKYECVATNSAGTRYSA 196 (212)
T ss_dssp CCGGGCEEEEEEEEETTEEEECC
T ss_pred CCcccCEEEEEEEECCCCccccc
Confidence 99999999999999999998654
No 73
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=7.8e-26 Score=179.10 Aligned_cols=241 Identities=15% Similarity=0.172 Sum_probs=145.2
Q ss_pred CCccEEecCCcEEEEEEEeee--CCCeeEEEEC--CeEEee---c---------cCCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGS--PLPSVFWTQE--GSQVLM---F---------PGNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~--~~~~~~---~---------~~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|+.++|.|.+.+. +.+.+.|+|+ +..+.. . ......+..... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 445678899999999999876 3578999986 332210 0 011123444332 248999999
Q ss_pred CCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCC
Q psy15128 102 QKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPP 179 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~ 179 (292)
+.+|+|.|+|.+.+..+.......|.|.... ..+|.+...+....+.+|+.++|.|.+.+. |. +.+.|++++..+..
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECSSC-CBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEecCC-CCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 9999999999998854333334455554221 123444433333446799999999999886 54 68999999876421
Q ss_pred CCccEEEcCCC------cEEEEeeecCCCCCC----------------------------------------------cc
Q psy15128 180 EDTRINVSSSG------SLQIDVLRDDFRAEP----------------------------------------------KD 207 (292)
Q Consensus 180 ~~~~~~~~~~~------~l~i~~~~~~d~g~~----------------------------------------------~~ 207 (292)
.........++ .|.|..+..+| |.| +.
T Consensus 166 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~ 244 (344)
T 1za6_B 166 HTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQ 244 (344)
T ss_dssp EECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCE
T ss_pred eECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCE
Confidence 00000001111 34444443333 311 11
Q ss_pred eEEe-------CCCceEEEeeCCCC-CC-CCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeE
Q psy15128 208 TRVA-------SGETALLECGPPKG-QP-EPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 208 ~~~~-------~g~~~~l~C~~~~~-~p-~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
+.+. .|..++|.|.+ .| +| .+.+.|+++|+.+............++.+.. ...|.+.....+|.|.|+
T Consensus 245 v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~--~s~l~i~~~~~~~~g~Yt 321 (344)
T 1za6_B 245 VYTLPPSRDELTKNQVSLTCLV-KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL--YSKLTVDKSRWQQGNVFS 321 (344)
T ss_dssp EEEECCCGGGGGSSSEEEEEEE-EEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEE--EEEEEECHHHHHTTCEEE
T ss_pred EEEeCCChHhccCCcEEEEEEE-eeEECCCeEEEEEECCeECCCcEecceEECCCCcEEE--EEEEEEChHHccCCCeEE
Confidence 1221 36679999998 66 44 3689999999887532222233344443322 123555556667799999
Q ss_pred EEEeeccccc
Q psy15128 279 LIAKNIRNQQ 288 (292)
Q Consensus 279 C~a~n~~g~~ 288 (292)
|.|.|.....
T Consensus 322 C~a~~~~l~~ 331 (344)
T 1za6_B 322 CSVMHEALHN 331 (344)
T ss_dssp EEEECTTSTT
T ss_pred EEEEcCCCCC
Confidence 9999987543
No 74
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=8.1e-25 Score=159.16 Aligned_cols=140 Identities=24% Similarity=0.358 Sum_probs=97.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+..................|.|.+++.+|+|.|+|.+.+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATN 84 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 56677777888999999999999999999999999999876532211111111122245899999999999999999999
Q ss_pred CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeC
Q psy15128 116 VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSL 177 (292)
Q Consensus 116 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l 177 (292)
..+.......+.+.. ...+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 85 ~~~~~~~~~~l~v~~--~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~ 144 (194)
T 2a38_A 85 GSGQATSTAELLVKA--ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEI 144 (194)
T ss_dssp TTEEEEEEEEEEEEC--CCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEEC
T ss_pred CCceEeEEEEEEEcc--CCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEEC
Confidence 877666665565542 122444444455555666666666666666666666666666544
No 75
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=1e-24 Score=159.04 Aligned_cols=184 Identities=21% Similarity=0.319 Sum_probs=131.2
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee--cEEEEccCCCCCCeEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE--GTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~Y~C~ 112 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .......... ..|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCC--CcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 46788888888999999999999999998999999999998764211 1111111112 2899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
+.+..+.......|.|.. ++.+. .|. .+
T Consensus 81 ~~n~~g~~~~~~~l~V~~-----~p~~~----------------------~~~----------~~--------------- 108 (197)
T 2j8h_A 81 ATNQGGSVSGTASLEVEV-----PAKIH----------------------LPK----------TL--------------- 108 (197)
T ss_dssp EEETTEEEEEEEEEEEEE-----EEEEC----------------------CSS----------CB---------------
T ss_pred EEECCCceeEEEEEEEcC-----CCcCC----------------------CCc----------cc---------------
Confidence 999877665555555542 10000 000 00
Q ss_pred EEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccc-ccc
Q psy15128 193 QIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSV-LGA 271 (292)
Q Consensus 193 ~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~ 271 (292)
..+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .++.+.... ....|.|.. +..
T Consensus 109 ----------~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~-----~~~~L~i~~~~~~ 170 (197)
T 2j8h_A 109 ----------EGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNN--GHYQVIVTR-----SFTSLVFPNGVER 170 (197)
T ss_dssp ----------TTBEEEEEETTCCCEEEEEE-EEESCCEEEEEESSCEECSS--SSCEEEECS-----SEEEEECTTCCCG
T ss_pred ----------cccCeEEEeCCCEEEEEEEE-EecCCCcEEEEECCEEeecC--CCEEEEEcC-----CceEEEEeCCCCc
Confidence 01124467789999999998 79999999999999988632 333322111 123688888 999
Q ss_pred cccceeEEEEeeccccccc
Q psy15128 272 LSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 272 ~~~g~y~C~a~n~~g~~~~ 290 (292)
.|+|.|+|.|.|..|.++.
T Consensus 171 ~d~G~Y~C~a~N~~g~~~~ 189 (197)
T 2j8h_A 171 KDAGFYVVCAKNRFGIDQK 189 (197)
T ss_dssp GGCEEEEEEEEETTEEEEE
T ss_pred ccCEeEEEEEEeCCCcEeE
Confidence 9999999999999998764
No 76
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.93 E-value=9.3e-27 Score=182.86 Aligned_cols=232 Identities=11% Similarity=0.109 Sum_probs=142.3
Q ss_pred CcEEEEEEEeee-C-CCeeEEEECCeEEeeccCCCcc---eeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 52 GIASFQCVAEGS-P-LPSVFWTQEGSQVLMFPGNAYG---HLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 52 ~~~~l~C~~~~~-~-~~~v~W~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
+.++|.|.+.+. | .+.|.|++++..+......... ...+...+.|.|.++..+|.|.|+|.+.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999886 4 4689999999876311100000 0011223467888888889999999999876543322211
Q ss_pred EEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC---ceEEEeCC-eeCCCCCccEEEcC------CCcEEEE
Q psy15128 127 QVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP---HIRWYKNG-NSLPPEDTRINVSS------SGSLQID 195 (292)
Q Consensus 127 ~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~---~~~W~~~~-~~l~~~~~~~~~~~------~~~l~i~ 195 (292)
.+. .....+..+...+....+.+|+.++|.|.+.+. |.+ .+.|++++ ..+........... .+.|.|.
T Consensus 105 ~~~-~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 105 CAD-SNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCC-SSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred CCC-CCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 000 011122333444555567899999999999876 455 89999975 44432211111111 2257777
Q ss_pred eeecCCCCCC--------------------------cceEE-------eCCCceEEEeeCCCC-CCCC-eEEEeEcCeEe
Q psy15128 196 VLRDDFRAEP--------------------------KDTRV-------ASGETALLECGPPKG-QPEP-TLHWKKNGQFI 240 (292)
Q Consensus 196 ~~~~~d~g~~--------------------------~~~~~-------~~g~~~~l~C~~~~~-~p~~-~~~W~~~g~~~ 240 (292)
++..+|+|.| +.+.+ ..|+.++|.|.+ .+ .|++ .|.|+++|++|
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~-~g~~p~~~~v~W~k~g~~l 262 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI-QNFMPEDISVQWLHNEVQL 262 (323)
T ss_dssp HHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEE-EEEBSSCCEEEEEETTEEC
T ss_pred HHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEe-eeeeCCCcEEEEEECCEEC
Confidence 7777777722 11111 128899999998 55 5544 89999999988
Q ss_pred ccCCCc--eEEecCCCccccccccccccccccccccceeEEEEeecccc
Q psy15128 241 DLESSK--RVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 241 ~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
...... ......++.+. ....|.|..+..+|.|.|+|.|.|..+.
T Consensus 263 ~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 263 PDARHSTTQPRKTKGSGFF--VFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CGGGEEECCCEECSSSSEE--EEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCCceeecCcccCCCCcEE--EEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 532100 01112232222 2336888888999999999999999886
No 77
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.93 E-value=7.9e-25 Score=172.51 Aligned_cols=195 Identities=19% Similarity=0.242 Sum_probs=141.7
Q ss_pred cccCCcCCCeeEEEEEEec-ccccccccEEEEEeCCCcEEe--CCCccEEecC---CcEEEEEE-EeeeCCCeeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNM-VGERETKPALLTVHAPPSFVV--RPQDQKVGLN---GIASFQCV-AEGSPLPSVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~-~~~~~~~~~~l~v~~~p~~~~--~~~~~~~~~g---~~~~l~C~-~~~~~~~~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+. .+..... +.|.|..+|.+.. .+....+.+| +.+.|.|. ..+.|.+.+.|++++
T Consensus 96 I~~v~~~D~G~Y~C~~~~~~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~ 174 (331)
T 3u83_A 96 LSRLELEDEGVYICEFATFPTGNRESQ-LNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRL 174 (331)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEE-EEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESS
T ss_pred EcccCcccCcEEEEEEEecCCCccEEE-EEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCC
Confidence 7789999999999996544 4544444 8999998887643 4556677888 77999997 778899999999953
Q ss_pred eEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEE-eCCCCceecCCCe
Q psy15128 75 SQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSV 153 (292)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~ 153 (292)
.....................|.|.++..+|.|.|+|.+.|..+.......|.|.. +|.+. ..+....+.+|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~-----~P~~~~~~~~~~~~~~g~~ 249 (331)
T 3u83_A 175 KGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY-----EPEVTIEGFDGNWYLQRMD 249 (331)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE-----EEEEEEECCCSCCBTTCCC
T ss_pred CCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec-----CCeEEEecCCCceEeCCCe
Confidence 32211110011111223345799999999999999999999887766666666653 23333 3445556889999
Q ss_pred EEEEeEeccCCCCc-eEEEeCCeeCCCCCccEEEcCCCcEEEE-eeecCCCCCCc
Q psy15128 154 AFLPCQAVGSPPPH-IRWYKNGNSLPPEDTRINVSSSGSLQID-VLRDDFRAEPK 206 (292)
Q Consensus 154 v~l~C~~~~~p~~~-~~W~~~~~~l~~~~~~~~~~~~~~l~i~-~~~~~d~g~~~ 206 (292)
+.|.|.+.+.|.+. +.|++++..+... ....+++|.|. ++..+|+|.|.
T Consensus 250 ~~l~C~~~g~p~p~~i~W~~~~~~~~~~----~~~~~~~L~i~~~v~~~d~G~Y~ 300 (331)
T 3u83_A 250 VKLTCKADANPPATEYHWTTLNGSLPKG----VEAQNRTLFFKGPINYSLAGTYI 300 (331)
T ss_dssp EEEEEEEEEESCCCEEEEEETTBSCCTT----EEEETTEEEECSCCCGGGCEEEE
T ss_pred EEEEEeCcCCCCCCEEEEEECCCccccc----ceecCcEEEEeCCCccccCeEEE
Confidence 99999999999998 9999999887653 12245689999 89998888543
No 78
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.93 E-value=5.4e-25 Score=172.27 Aligned_cols=201 Identities=19% Similarity=0.300 Sum_probs=141.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe-CCCcEEeCC---CccEEecCCcEEEEEEE------eeeCCCeeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH-APPSFVVRP---QDQKVGLNGIASFQCVA------EGSPLPSVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~-~~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~~~~~v~W~ 71 (292)
|.+++.+|+|.|+|.+.|..+..... +.+.+. .+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 66 i~~v~~~D~G~Y~C~a~n~~g~~~~~-~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~ 144 (315)
T 1itb_B 66 FVPAKVEDSGHYYCVVRNSSYCLRIK-ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWY 144 (315)
T ss_dssp CTTCCGGGCSCCEECCCSSSCCCCEE-CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEE
T ss_pred ECCCChhhCEEEEEEEeCCceEEEEE-EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEE
Confidence 78899999999999999887765544 444443 344433222 22467889999999998 77888999999
Q ss_pred ECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE-eCCcCeeE-EEEEEEEee--cCCCCCeEEeCCCC-c
Q psy15128 72 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL-SVAGSTTV-RAFLQVTSV--EDTPPPIVQVGPSN-Q 146 (292)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~-~~~~~~~~-~~~l~v~~~--~~~~~~~~~~~~~~-~ 146 (292)
+++..+... ........+.|.|.+++.+|+|.|+|.+. +..+.... ...+.+... ....+|.+...+.. .
T Consensus 145 k~~~~l~~~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 219 (315)
T 1itb_B 145 KDCKPLLLD-----NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETM 219 (315)
T ss_dssp ETTEECCCC-----SSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEE
T ss_pred ECCEECCCc-----cceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcE
Confidence 999876421 11223446699999999999999999999 66665421 223332222 11234555444432 4
Q ss_pred eecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCcc-----EEEcC---------CCcEEEEeeecCC-CCCCcce
Q psy15128 147 TLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTR-----INVSS---------SGSLQIDVLRDDF-RAEPKDT 208 (292)
Q Consensus 147 ~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~-----~~~~~---------~~~l~i~~~~~~d-~g~~~~~ 208 (292)
.+.+|+.+.|.|.+.+.|.|.+.|+++|..+...... ..... .+.|.|.++..+| +|.|...
T Consensus 220 ~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~ 296 (315)
T 1itb_B 220 EVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCF 296 (315)
T ss_dssp ECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEE
T ss_pred EEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEE
Confidence 6789999999999999999999999999998775421 11111 1278999999999 9966543
No 79
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.93 E-value=2.7e-25 Score=171.86 Aligned_cols=198 Identities=17% Similarity=0.181 Sum_probs=141.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc-EEeCCCccEEecCCcEEEEEEEeeeCCCe-eEEEECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS-FVVRPQDQKVGLNGIASFQCVAEGSPLPS-VFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|++.+....
T Consensus 55 i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~- 132 (289)
T 3ejj_X 55 TRNATFKNTGTYRCTELEDPMAGSTT-IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQV- 132 (289)
T ss_dssp ESSCCGGGCEEEEEECCC-----CEE-EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEEC-
T ss_pred EeeeccccCEEEEEEEeccCCcceeE-EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeec-
Confidence 78899999999999999887775555 8899987766 56677778899999999999998876654 99987444332
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe-CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEe
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS-VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPC 158 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~-~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 158 (292)
....+.....++.|.|.+++.+|+|.|+|.+.+ ..+.......|.|... ...+|.+...+....+.+|+.+.|.|
T Consensus 133 ---~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~-~~~~p~i~~~~~~~~~~~g~~~~l~C 208 (289)
T 3ejj_X 133 ---LRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV-HPEPPQIKLEPSKLVRIRGEAAQIVC 208 (289)
T ss_dssp ---CTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS-CCCCCEEEEESSSEECCSSSCEEEEE
T ss_pred ---CCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC-CCCCCeEEecCCceEEEeCCcEEEEE
Confidence 122234445567899999999999999999984 3333344455555421 12356677667777778999999999
Q ss_pred Eecc-CCCCceEEEeCCeeCCCCCccE----EEcCCCcEEEEeeecCCCCCC
Q psy15128 159 QAVG-SPPPHIRWYKNGNSLPPEDTRI----NVSSSGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 159 ~~~~-~p~~~~~W~~~~~~l~~~~~~~----~~~~~~~l~i~~~~~~d~g~~ 205 (292)
.+.+ .|.+.+.|++++..+....... .....+.|.|.++..+|+|.|
T Consensus 209 ~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 260 (289)
T 3ejj_X 209 SATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIY 260 (289)
T ss_dssp EEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEE
T ss_pred EeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEE
Confidence 9987 6889999999999886532111 011134788888888888743
No 80
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=7e-25 Score=171.49 Aligned_cols=199 Identities=19% Similarity=0.245 Sum_probs=143.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+.........+.|.+..+|.....+....+..++.+.+.|.+. +.|.+.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc
Confidence 789999999999999875443333333788888888877777677777888999999765 6788999999998765321
Q ss_pred cCC-CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEE-eCCCCceecCCCeEEEEe
Q psy15128 81 PGN-AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSVAFLPC 158 (292)
Q Consensus 81 ~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~v~l~C 158 (292)
... ..........+.|.|.+...+|+|.|+|.+.|..+.......+.+.+. .+|.+. .......+..|+.++|.|
T Consensus 163 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~---~~P~v~~~~~~~~~~~~g~~v~l~C 239 (313)
T 4fqp_A 163 SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY---YPPEVSISGYDNNWYLGQNEATLTC 239 (313)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC---EEEEEEEECCCSCEETTCCCEEEEE
T ss_pred ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc---cCCccccccccceeecCCCeEEEEE
Confidence 100 000111222346899999999999999999998776555544443321 134443 344555567889999999
Q ss_pred EeccCCCC-ceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCcc
Q psy15128 159 QAVGSPPP-HIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPKD 207 (292)
Q Consensus 159 ~~~~~p~~-~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~~ 207 (292)
.+.++|.| .+.|++++.++... ....+++|.|.++..+|+|.|..
T Consensus 240 ~~~g~P~p~~v~W~~~~~~l~~~----~~~~~~~L~i~~v~~~d~G~Y~C 285 (313)
T 4fqp_A 240 DARSNPEPTGYNWSTTMGPLPPF----AVAQGAQLLIRPVDKPINTTLIC 285 (313)
T ss_dssp EEEEESCCCEEEEEETTBSCCTT----EEEETTEEEECCCSSCCEEEEEE
T ss_pred EecCCCCCcEEEEEECCEECCCc----eEEeCCEEEECcCChhhCEEEEE
Confidence 99999988 59999999988653 22346689999999999986543
No 81
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=6.7e-25 Score=179.75 Aligned_cols=241 Identities=13% Similarity=0.169 Sum_probs=151.2
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe---ecc---------CCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL---MFP---------GNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~---~~~---------~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|+.++|.|.+.+.+ .+.+.|+|+. .... ... .....+..... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 3456788999999999998753 5689999853 2211 100 00123343332 358999999
Q ss_pred CCCCCeEEEEEEEeCCcCe---eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCee
Q psy15128 102 QKEDAGFFVCSALSVAGST---TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNS 176 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~ 176 (292)
+.+|+|.|.|.+.+..+.. .....|.|......++.++...+. ..+.+|+.++|.|.+.+. |.+ .+.|++++..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC-SSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc-ccCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 9999999999999865431 122345554211122333333333 335789999999999875 766 8999999876
Q ss_pred CCCC-CccEEE----cCCCcEEEEeeecCCCCCC----------------------------------------cce-E-
Q psy15128 177 LPPE-DTRINV----SSSGSLQIDVLRDDFRAEP----------------------------------------KDT-R- 209 (292)
Q Consensus 177 l~~~-~~~~~~----~~~~~l~i~~~~~~d~g~~----------------------------------------~~~-~- 209 (292)
+... ...... ...+.|.|..+..+| |.| +.+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~ 244 (444)
T 1igt_B 166 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIF 244 (444)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEE
T ss_pred CCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEec
Confidence 3210 000000 011235555555555 522 111 0
Q ss_pred -------EeCCCceEEEeeCCCCC---C-CCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeE
Q psy15128 210 -------VASGETALLECGPPKGQ---P-EPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 210 -------~~~g~~~~l~C~~~~~~---p-~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
+.+|+.+.|.|.+ .+. | .+.+.|+++|..+............++.+ .....|.|..+...|+|.|+
T Consensus 245 ~p~~~~~~~~G~~~~L~C~~-~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~ 321 (444)
T 1igt_B 245 PPKIKDVLMISLSPIVTCVV-VDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTL--RVVSALPIQHQDWMSGKEFK 321 (444)
T ss_dssp CCCHHHHHCTTSCCEEEEEE-EEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSE--EEEEEEECCHHHHHTTCEEE
T ss_pred CCchhheeecCCCcEEEEEE-eecccCCCCeEEEEEECCccccCcccccceeCCCCcE--EEEEEEEEcHHHhccCCcEE
Confidence 2569999999998 565 3 36999999998885332222222222222 12346889999999999999
Q ss_pred EEEeeccccc
Q psy15128 279 LIAKNIRNQQ 288 (292)
Q Consensus 279 C~a~n~~g~~ 288 (292)
|.|.|..|..
T Consensus 322 C~a~n~~~~~ 331 (444)
T 1igt_B 322 CKVNNKDLPA 331 (444)
T ss_dssp EEEECTTCSS
T ss_pred EEEEcCCCCC
Confidence 9999998865
No 82
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=182.03 Aligned_cols=201 Identities=20% Similarity=0.263 Sum_probs=140.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEee----------eCCCeeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEG----------SPLPSVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~~~~~v~W~ 71 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+
T Consensus 65 i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~ 143 (317)
T 2y25_A 65 ITEFSKKDAGIYEVILKDDRGKDKSR-LKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWS 143 (317)
T ss_dssp ETTCCSTTCSCEEEEEESSSCEEEEE-ECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEE
T ss_pred EccCCcccCeEEEEEEECCCCcEEEE-EEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEE
Confidence 67899999999999999887765444 5555554443333333344556777788887766 688899999
Q ss_pred ECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe----------------ecCCC
Q psy15128 72 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS----------------VEDTP 135 (292)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~----------------~~~~~ 135 (292)
+++..+.. ..............|.|.+++.+|.|.|+|.+.|..+.......+.+.. .....
T Consensus 144 ~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (317)
T 2y25_A 144 HNGSAIRY--SDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR 221 (317)
T ss_dssp ESSSBCCC--CSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ECCEECCC--CCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCC
Confidence 99876631 1111111111223599999999999999999999877666655554321 11122
Q ss_pred CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC-C---cEEEEeeecCCCCCCc
Q psy15128 136 PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS-G---SLQIDVLRDDFRAEPK 206 (292)
Q Consensus 136 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~-~---~l~i~~~~~~d~g~~~ 206 (292)
+......+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.+... + .|.|.++..+|+|.|.
T Consensus 222 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 295 (317)
T 2y25_A 222 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD-HCNLKFEAGRTAYFTINGVSTADSGKYG 295 (317)
T ss_dssp CEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS-SEEECCBTTTEEEEEEBSCCSTTCEEEE
T ss_pred CcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC-cEEEEEcCCCEEEEEECCCCHHHCEEEE
Confidence 3333334555678899999999999999999999999999987653 4444332 4 7999999999988553
No 83
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.93 E-value=1.4e-24 Score=178.49 Aligned_cols=241 Identities=12% Similarity=0.116 Sum_probs=146.7
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeec---------cCCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMF---------PGNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~---------~~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|+.++|.|.+.+.+ .+.+.|+|.. .. +... ......++.... ...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 4456788999999999998765 6689999842 21 1100 011123444332 248999999
Q ss_pred CCCCCeEEEEEEEeCCc------------CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-Cc
Q psy15128 102 QKEDAGFFVCSALSVAG------------STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PH 167 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~ 167 (292)
+.+|+|.|+|.+.+..+ .......|.|.... ..+|.+...+....+.+|+.++|.|.+.+. |. +.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC-CBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC-CCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeE
Confidence 99999999999988754 11223455554311 123444333333446799999999999877 64 78
Q ss_pred eEEEeCCeeCCCCCccEEEcCCC------cEEEEeeecCCCCCC------------------------------------
Q psy15128 168 IRWYKNGNSLPPEDTRINVSSSG------SLQIDVLRDDFRAEP------------------------------------ 205 (292)
Q Consensus 168 ~~W~~~~~~l~~~~~~~~~~~~~------~l~i~~~~~~d~g~~------------------------------------ 205 (292)
+.|++++..+...........++ .|.|.++..+| |.|
T Consensus 166 v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 244 (457)
T 1hzh_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPEL 244 (457)
T ss_dssp EEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCC
T ss_pred EEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccc
Confidence 99999986543111111112222 46777777767 722
Q ss_pred ---cce-E--------EeCCCceEEEeeCCCCCCCC----eEEEeEcCeEeccCCCceEEecCCCccccccccccccccc
Q psy15128 206 ---KDT-R--------VASGETALLECGPPKGQPEP----TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVL 269 (292)
Q Consensus 206 ---~~~-~--------~~~g~~~~l~C~~~~~~p~~----~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 269 (292)
+.+ . +.+|+.+.|.|.+ .+.|++ .|.|+++|.++............++.+... ..|.|...
T Consensus 245 ~~~p~v~~~~p~~~~~~~~G~~v~L~C~~-~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~--~~l~i~~~ 321 (457)
T 1hzh_H 245 LGGPSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV--SVLTVLHQ 321 (457)
T ss_dssp SSSCEEEEECCCHHHHHCTTSCCCEEEEE-ECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEE--EEECCCHH
T ss_pred cCCceEEeECcCchhhcccCCceEEEEEE-EcccCCCCceEEEEEeCCccccccccccceecCCCcEEEE--EEEEECHH
Confidence 111 0 2359999999998 576543 999999999885222112222223322211 12333333
Q ss_pred cccccceeEEEEeeccccc
Q psy15128 270 GALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 270 ~~~~~g~y~C~a~n~~g~~ 288 (292)
...|+|.|+|.|.|..+..
T Consensus 322 d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 322 DWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HHHHTCCEEEEEECTTSSS
T ss_pred HccCCCcEEEEEeCCCCCC
Confidence 3445999999999876654
No 84
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=2.8e-25 Score=176.38 Aligned_cols=204 Identities=15% Similarity=0.211 Sum_probs=118.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEe----CCCccEEecCCcEEEEEEE-----eeeCCCeeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVV----RPQDQKVGLNGIASFQCVA-----EGSPLPSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~----~~~~~~~~~g~~~~l~C~~-----~~~~~~~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..+|.... .+....+.+|+.+.|.|.+ .+.|.+.+.|++
T Consensus 83 i~~~~~~D~G~Y~C~a~n~~~~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k 161 (349)
T 4dep_C 83 FRPTLLNDTGNYTCMLRNTTYCSKVA-FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM 161 (349)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEE-EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEE
T ss_pred EccCChhhCEEEEEEEecCCceEEEE-EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEee
Confidence 67899999999999999987776665 8888887554221 2334567889999999974 667889999999
Q ss_pred CCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee--EEEEEEEEeecCC---CCCeEEeCCCCc-
Q psy15128 73 EGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT--VRAFLQVTSVEDT---PPPIVQVGPSNQ- 146 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~--~~~~l~v~~~~~~---~~~~~~~~~~~~- 146 (292)
++..+. ... ........|.|.+++.+|+|.|+|.+.|..+... ....+.+.+.... .+|.+...+...
T Consensus 162 ~~~~l~-----~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~ 235 (349)
T 4dep_C 162 GCYKIQ-----NFN-NVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVV 235 (349)
T ss_dssp TTEECC-----SCS-SEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC-------
T ss_pred CCEECC-----Ccc-ceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCcee
Confidence 998662 111 1223346899999999999999999999763332 2333444332211 134443333222
Q ss_pred -eecCCCeEEEEeEec----cCCCCceEEEeCCeeCCCCCccEEE------c------CCCcEEEEeeecCCC-CCCcce
Q psy15128 147 -TLPLHSVAFLPCQAV----GSPPPHIRWYKNGNSLPPEDTRINV------S------SSGSLQIDVLRDDFR-AEPKDT 208 (292)
Q Consensus 147 -~~~~g~~v~l~C~~~----~~p~~~~~W~~~~~~l~~~~~~~~~------~------~~~~l~i~~~~~~d~-g~~~~~ 208 (292)
.+.+|+.+.|.|.+. +.|.+.+.|++++..+.....++.. . ....|.|.++..+|. |.|...
T Consensus 236 ~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~ 315 (349)
T 4dep_C 236 YEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCH 315 (349)
T ss_dssp ---------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEE
T ss_pred EEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEE
Confidence 678999999999998 5688999999999887652111111 0 122489999999999 987655
Q ss_pred EEeC
Q psy15128 209 RVAS 212 (292)
Q Consensus 209 ~~~~ 212 (292)
....
T Consensus 316 a~N~ 319 (349)
T 4dep_C 316 ARSA 319 (349)
T ss_dssp EECS
T ss_pred EEcC
Confidence 4433
No 85
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.93 E-value=2.3e-25 Score=162.31 Aligned_cols=125 Identities=18% Similarity=0.241 Sum_probs=83.2
Q ss_pred ccEEecCCcEEEEEE---EeeeCCCeeEEEECCeEEee------------ccCCCcceeE---EeeecEEEEccCCCCCC
Q psy15128 45 DQKVGLNGIASFQCV---AEGSPLPSVFWTQEGSQVLM------------FPGNAYGHLH---VTQEGTLRIQGVQKEDA 106 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~---~~~~~~~~v~W~~~~~~~~~------------~~~~~~~~~~---~~~~~~l~i~~~~~~d~ 106 (292)
.+.+..|+.++|.|. +.+.|.+.+.|+|++..... .......+.. ......|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 456889999999995 45678899999997632110 0000111111 12234799999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCC
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNG 174 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~ 174 (292)
|.|+|.+.|..+.......|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~-----p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~ 144 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVK-----PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPE 144 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE-----EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-
T ss_pred eEEEEEEEcCCCcEEEEEEEEecC-----CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECC
Confidence 999999999888777777776653 445544444455566666777777666666667776544
No 86
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=1.2e-25 Score=177.41 Aligned_cols=205 Identities=24% Similarity=0.331 Sum_probs=116.7
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCC----------------------cEEe----CCCccEEecCCcE
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP----------------------SFVV----RPQDQKVGLNGIA 54 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p----------------------~~~~----~~~~~~~~~g~~~ 54 (292)
.|.+++.+|+|.|+|.+.+. +..... +.|.|...+ .+.. ......+.+|+.+
T Consensus 64 ~i~~v~~~D~G~Y~C~a~n~-~~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v 141 (334)
T 1ry7_B 64 QVLNASHEDSGAYSCRQRLT-QRVLCH-FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTV 141 (334)
T ss_dssp ---------------------------------------------------------CCCCSCCTTCCCCEEEEETTCCE
T ss_pred EEeecccccCEEEEEEEEeC-CeEEEE-EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcE
Confidence 37789999999999999988 554444 777776443 2211 1123567889999
Q ss_pred EEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCC
Q psy15128 55 SFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDT 134 (292)
Q Consensus 55 ~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~ 134 (292)
.|.|.+.+.|.+.+.|++++..+..... ............|.|.+++.+|+|.|+|.+.|..+.......|.|......
T Consensus 142 ~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 220 (334)
T 1ry7_B 142 RFRCPAAGNPTPSISWLKNGREFRGEHR-IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH 220 (334)
T ss_dssp EEECCCCCSSCCEEECCBTTBCCCTTSS-TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCS
T ss_pred EEEEEccCCCCCeEEEEECCEECccccc-ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCC
Confidence 9999999999999999999876532111 001111123458999999999999999999998887766666766542211
Q ss_pred CCCeEEe-CCCCceecCCCeEEEEeEeccCCCCceEEEe----CCeeCCCCCcc-EEEcC----------CCcEEEEeee
Q psy15128 135 PPPIVQV-GPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK----NGNSLPPEDTR-INVSS----------SGSLQIDVLR 198 (292)
Q Consensus 135 ~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~----~~~~l~~~~~~-~~~~~----------~~~l~i~~~~ 198 (292)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+...... ..... ...|.|.++.
T Consensus 221 -~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 299 (334)
T 1ry7_B 221 -RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVT 299 (334)
T ss_dssp -SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCC
T ss_pred -CCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCC
Confidence 233322 3456678899999999999999999999999 67766543221 11111 1279999999
Q ss_pred cCCCCCCcceE
Q psy15128 199 DDFRAEPKDTR 209 (292)
Q Consensus 199 ~~d~g~~~~~~ 209 (292)
.+|+|.|....
T Consensus 300 ~~d~G~Y~C~a 310 (334)
T 1ry7_B 300 FEDAGEYTCLA 310 (334)
T ss_dssp TTSCSEEEEEE
T ss_pred HHHCEEEEEEE
Confidence 99999665443
No 87
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.93 E-value=2.3e-25 Score=176.14 Aligned_cols=201 Identities=17% Similarity=0.242 Sum_probs=147.3
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEE--eCCCccEEecCCcEEEEEE-----EeeeCCCeeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFV--VRPQDQKVGLNGIASFQCV-----AEGSPLPSVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~~~~~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..++... .......+.+|+.+.|.|. +.+.|.+.+.|++++
T Consensus 85 i~~v~~~D~G~Y~C~~~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g 163 (339)
T 3o4o_C 85 LLPALQEDSGTYVCTTRNASYCDKMS-IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDS 163 (339)
T ss_dssp ESSBCTTCCEEEECCEEETTEEEEEE-EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESS
T ss_pred ECCCCcccCEEEEEEEECCcceEEEE-EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCC
Confidence 67899999999999999988766555 888888765432 2223346889999999999 778888999999998
Q ss_pred eEEeeccCCCcceeEEe-eecEEEEccCCCCCCeEEEEEEEeCCcC----eeEEEEEEEEeecCCCCCeEEeCCCCceec
Q psy15128 75 SQVLMFPGNAYGHLHVT-QEGTLRIQGVQKEDAGFFVCSALSVAGS----TTVRAFLQVTSVEDTPPPIVQVGPSNQTLP 149 (292)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 149 (292)
..+.. ...+.... ..+.|.|.+++.+|.|.|+|.+.|..+. ....+.|.|.......+|.+...+....+.
T Consensus 164 ~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~ 239 (339)
T 3o4o_C 164 LLLDK----DNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISAS 239 (339)
T ss_dssp CBCCT----TCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCC
T ss_pred eeCCC----CCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEec
Confidence 76531 11122222 2358999999999999999999987764 344555655543323355666666666788
Q ss_pred CCCeEEEEeEe---ccCC-CCceEEEeCCeeCCCCC--------ccEEEcCCC------cEEEEeeecCCC-CCCcc
Q psy15128 150 LHSVAFLPCQA---VGSP-PPHIRWYKNGNSLPPED--------TRINVSSSG------SLQIDVLRDDFR-AEPKD 207 (292)
Q Consensus 150 ~g~~v~l~C~~---~~~p-~~~~~W~~~~~~l~~~~--------~~~~~~~~~------~l~i~~~~~~d~-g~~~~ 207 (292)
+|+.+.|.|.+ .+.| .+.+.|++++..+.... .++....++ .|.|.++..+|. |.|..
T Consensus 240 ~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C 316 (339)
T 3o4o_C 240 LGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKC 316 (339)
T ss_dssp CCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEE
T ss_pred cCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEE
Confidence 99999999999 8888 78899999998765321 223333344 799999999997 86643
No 88
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.92 E-value=1.3e-24 Score=168.11 Aligned_cols=194 Identities=15% Similarity=0.144 Sum_probs=142.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCC-CeeEEE-ECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPL-PSVFWT-QEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~v~W~-~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+ |. ...+.|.|..+|.....+....+.+|+.+.|.|.+.+ |. +.+.|+ +++..+.
T Consensus 61 i~~~~~~d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~- 134 (290)
T 2o26_X 61 QEKAEATRTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP- 134 (290)
T ss_dssp ETTCCGGGCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC-
T ss_pred EeccCHHhCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC-
Confidence 678999999999999998 33 3448889988777666667788889999999999985 76 899995 5665442
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCe-EEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEE
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAG-FFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLP 157 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 157 (292)
...+........|.|.+++.+|.| .|+|.+.|..+... ....+.|.. ....+|.+...+....+.+|+.+.|.
T Consensus 135 ----~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~-~~~~~P~i~~~~~~~~v~~G~~v~l~ 209 (290)
T 2o26_X 135 ----TDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVRE-AIKAIPVVSVPETSHLLKKGDTFTVV 209 (290)
T ss_dssp ----TTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEEC-CCCSCCEEECSCSBCCCCTTCCEEEE
T ss_pred ----CCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEe-CCCCCCccccCCCcceEecCCcEEEE
Confidence 123344455568999999999999 99999999744322 234555542 12346677777777788999999999
Q ss_pred eEeccCCCCc-eEEEeCCeeC----CCCCc-cE----EEcCCCcEEEEeeecCCCCCCc
Q psy15128 158 CQAVGSPPPH-IRWYKNGNSL----PPEDT-RI----NVSSSGSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 158 C~~~~~p~~~-~~W~~~~~~l----~~~~~-~~----~~~~~~~l~i~~~~~~d~g~~~ 206 (292)
|.+.+.|.+. +.|++++..+ ..... .+ .....+.|.|.++..+|+|.|.
T Consensus 210 C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 268 (290)
T 2o26_X 210 CTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFM 268 (290)
T ss_dssp EEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEE
T ss_pred EEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEE
Confidence 9999998886 9999998773 22111 11 1123457999999998888554
No 89
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.92 E-value=1.8e-23 Score=151.67 Aligned_cols=174 Identities=17% Similarity=0.321 Sum_probs=112.8
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeC-CCeeEEEE-CCeEEeeccCCCcceeEE----eeecEEEEccCCCCCCeEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSP-LPSVFWTQ-EGSQVLMFPGNAYGHLHV----TQEGTLRIQGVQKEDAGFF 109 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~-~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~Y 109 (292)
++.+...+....+.+|+.++|.|.+.+.+ .+.+.|++ ++..+... ..+... .....|.|.+++.+|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 77 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN----QQRISVVWNDDDSSTLTIYNANIDDAGIY 77 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCB----SSSEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCC----CCeEEEEECCCCceEEEEccCCcccCEEE
Confidence 34566677788899999999999998876 78999999 77665321 112222 2346899999999999999
Q ss_pred EEEEEeCCc-CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcC
Q psy15128 110 VCSALSVAG-STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSS 188 (292)
Q Consensus 110 ~C~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~ 188 (292)
+|.+.+..+ .......|.+. .+|.+...+....
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~-----~~p~~~~~~~~~~----------------------------------------- 111 (191)
T 1epf_A 78 KCVVTAEDGTQSEATVNVKIF-----QKLMFKNAPTPQE----------------------------------------- 111 (191)
T ss_dssp EEEEEETTTEEEEEEEEEEEE-----CCSEEEECCSSEE-----------------------------------------
T ss_pred EEEEEcCCCcceEEEEEEEee-----cCceEecCCCcEe-----------------------------------------
Confidence 999998764 22333333332 1333333333333
Q ss_pred CCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccc
Q psy15128 189 SGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSV 268 (292)
Q Consensus 189 ~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 268 (292)
+.+|+.+.|.|.+ .+.|.+.+.|+++|..+......++....++ .|.|..
T Consensus 112 ---------------------~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--------~L~i~~ 161 (191)
T 1epf_A 112 ---------------------FKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLSNN--------YLQIRG 161 (191)
T ss_dssp ---------------------CCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGCCTTEEECTTS--------CEEETT
T ss_pred ---------------------ecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccCCceEEEecCC--------eEEECC
Confidence 3345555666655 4555556666666655543333333332222 477888
Q ss_pred ccccccceeEEEEeecccccc
Q psy15128 269 LGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 269 ~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+..+|+|.|+|.|.|..|...
T Consensus 162 ~~~~d~G~Y~C~a~n~~~~~~ 182 (191)
T 1epf_A 162 IKKTDEGTYRCEGRILARGEI 182 (191)
T ss_dssp CCGGGCEEEEEEEEEGGGTEE
T ss_pred CChhhCEEEEEEEEEecceeE
Confidence 999999999999999996543
No 90
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.5e-23 Score=152.74 Aligned_cols=179 Identities=19% Similarity=0.330 Sum_probs=128.3
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+...... ..|.|.+++.+|+|.|+|
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQ-----SRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECC-----CSSEEEEESSSEEEEEEECCSGGGCEEEEE
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCC-----CccEEEEeCCCEEEEEEecCCccCCEEEEE
Confidence 456777788888999999999999999999999999999987631 112222222 379999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCc
Q psy15128 112 SALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGS 191 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~ 191 (292)
.+.+..+.......+.+... |. .... . .
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~-----p~---------------------~~~~-------------~-~------------ 108 (197)
T 3lcy_A 81 IATNEVGEVETSSKLLLQAT-----PQ---------------------FHPG-------------Y-P------------ 108 (197)
T ss_dssp EEECSSCEEEEEEEEEEEEE-----EE---------------------ECTT-------------S-C------------
T ss_pred EEECCCCceeEEEEEEEEcC-----CC---------------------CCCC-------------c-c------------
Confidence 99987776555555544320 00 0000 0 0
Q ss_pred EEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccc
Q psy15128 192 LQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGA 271 (292)
Q Consensus 192 l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 271 (292)
......+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..++.+.... ....|.|..+..
T Consensus 109 ------------~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~--~~~~~~~~~~-----~~~~L~i~~~~~ 168 (197)
T 3lcy_A 109 ------------LKEKYYGAVGSTLRLHVMY-IGRPVPAMTWFHGQKLLQN--SENITIENTE-----HYTHLVMKNVQR 168 (197)
T ss_dssp ------------CCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCC--CSSEEEEECS-----SEEEEEESSCCH
T ss_pred ------------CCcceeecCCCeEEEEEEE-eeeeCCeeEEeECCEECCC--CCceEEEEcC-----CEEEEEEccccc
Confidence 0123456679999999998 7899999999999998863 3333332221 113688888884
Q ss_pred -cccceeEEEEeeccccccc
Q psy15128 272 -LSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 272 -~~~g~y~C~a~n~~g~~~~ 290 (292)
+|+|.|+|.|.|..|..+.
T Consensus 169 ~~d~G~Y~C~a~n~~g~~~~ 188 (197)
T 3lcy_A 169 KTHAGKYKVQLSNVFGTVDA 188 (197)
T ss_dssp HHHCEEEEEEEECSSCEEEE
T ss_pred hhhCceEEEEEEcCcCceEE
Confidence 8999999999999998764
No 91
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.92 E-value=1e-23 Score=152.66 Aligned_cols=179 Identities=19% Similarity=0.327 Sum_probs=115.9
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..+.....++.|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIS---DNRFAMLANNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCC---CTTEEECTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceecc---CCeEEEecCCCEEEeeCCHhHCcEEEEEEEE
Confidence 4667777888899999999999999988889999999987664221 2334444566899999999999999999998
Q ss_pred CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEE
Q psy15128 116 VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQID 195 (292)
Q Consensus 116 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~ 195 (292)
..+.......+.+.+.. +|.+...+..
T Consensus 79 ~~~~~~~~~~~~l~v~~---~p~~~~~~~~-------------------------------------------------- 105 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNV---PPAISMPQKS-------------------------------------------------- 105 (189)
T ss_dssp TTTTEEEEEEEEEEEEE---EEEEECSCCE--------------------------------------------------
T ss_pred cCCCceEEEEEEEEecC---CCCccccccc--------------------------------------------------
Confidence 76544332222222110 1111111000
Q ss_pred eeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccc
Q psy15128 196 VLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDD 275 (292)
Q Consensus 196 ~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 275 (292)
....+..|+.+.|.|.+ .+.|.+.+.|+++|..+.. ..++..... ...|.|..+..+|+|
T Consensus 106 ----------~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~~~~--~~~~~~~~~-------~~~L~i~~~~~~d~G 165 (189)
T 2v5t_A 106 ----------FNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEE--NEKYILKGS-------NTELTVRNIINSDGG 165 (189)
T ss_dssp ----------EEEETTSCCCEEEECEE-EEESCCEEEEEETTEECCC--SSSEEEETT-------TTEEEECSCCGGGCE
T ss_pred ----------ccccccCCCcEEEEEEE-ccCCCCeEEEEECCEECcC--CCcEEEecC-------CCEEEEcCCChhhCe
Confidence 01223456777777776 5666677777777776642 222222221 125788889999999
Q ss_pred eeEEEEeeccccccc
Q psy15128 276 QWKLIAKNIRNQQQH 290 (292)
Q Consensus 276 ~y~C~a~n~~g~~~~ 290 (292)
.|+|.|+|..|....
T Consensus 166 ~Y~C~a~n~~g~~~~ 180 (189)
T 2v5t_A 166 PYVCRATNKAGEDEK 180 (189)
T ss_dssp EEEEEEEETTEEEEE
T ss_pred eEEEEEEeCCCceeE
Confidence 999999999998764
No 92
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=2.6e-23 Score=151.34 Aligned_cols=137 Identities=20% Similarity=0.399 Sum_probs=96.4
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeeccCCCcceeEEee--------ecEEEEccCCCCCC
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ--------EGTLRIQGVQKEDA 106 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--------~~~l~i~~~~~~d~ 106 (292)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ...+..... .+.|.|.+++.+|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADS-TQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEE-EEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCC-CceEEEEccccccceeeccEEEEEeccccCC
Confidence 57788888899999999999999998 889899999999987632110 000111111 46899999999999
Q ss_pred eEEEEEEEeCCcCeeEE-EEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC-ceEEEeCCeeCC
Q psy15128 107 GFFVCSALSVAGSTTVR-AFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP-HIRWYKNGNSLP 178 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~~~~~~l~ 178 (292)
|.|+|.+.+..+..... ..|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+.
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~ 149 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLE-----GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLA 149 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC-----CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSS
T ss_pred cEEEEEEEeCCCceecccEEEEEe-----cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEecc
Confidence 99999999876543222 444443 24555555555666677777777777777666 677777665543
No 93
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.92 E-value=1.1e-23 Score=155.83 Aligned_cols=187 Identities=33% Similarity=0.550 Sum_probs=125.8
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecE----EEEccCCCCCCeEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGT----LRIQGVQKEDAGFFV 110 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~----l~i~~~~~~d~g~Y~ 110 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ...+.... ++. |.|.+++.+|+|.|+
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~-~~~~~~~~-~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEK-KSHRVQFK-DGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSS-SSSEEECT-TSCEEESSCCBSSSCBCCEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCc-cceeEEec-CCceEEEEEeccCCcccCceEE
Confidence 467888888888999999999999999988899999999987643211 11112111 222 368889999999999
Q ss_pred EEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC
Q psy15128 111 CSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS 189 (292)
Q Consensus 111 C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~ 189 (292)
|.+.+..+... ....+.+... ++ . +.
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~--------------------------------~~-~---------~~----------- 112 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVL--------------------------------RD-D---------FR----------- 112 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEE--------------------------------CC-S---------CS-----------
T ss_pred EEEecCCCccccccceEEEEEe--------------------------------CC-C---------cE-----------
Confidence 99998765431 1223332210 00 0 00
Q ss_pred CcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccc
Q psy15128 190 GSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVL 269 (292)
Q Consensus 190 ~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 269 (292)
..+....+..|+.+.|.|.+..+.|.+.+.|+++|..+..... ........+.......|.|..+
T Consensus 113 -------------~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~ 177 (217)
T 2vr9_A 113 -------------VEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKA--MSFGASSRVRIVDGGNLLISNV 177 (217)
T ss_dssp -------------BCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCC--C---CCCSEEEETTTEEEESSC
T ss_pred -------------ECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccc--cccccCCcEEecCCCcEEEeeC
Confidence 0012345678999999999757889999999999998853221 1111111111122336889999
Q ss_pred cccccceeEEEEeecccccccC
Q psy15128 270 GALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 270 ~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
..+|+|.|+|.|+|..|....+
T Consensus 178 ~~~d~G~Y~C~a~N~~G~~~~~ 199 (217)
T 2vr9_A 178 EPIDEGNYKCIAQNLVGTRESS 199 (217)
T ss_dssp CSTTCEEEEEEEEETTEEEECC
T ss_pred CHHHCeEEEEEEEcccceeccc
Confidence 9999999999999999988654
No 94
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=1e-23 Score=151.78 Aligned_cols=132 Identities=24% Similarity=0.504 Sum_probs=89.3
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee-----ecEEEEccCCCCCCeEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ-----EGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~ 110 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....... ...|.|.+++.+|+|.|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 76 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-----DQLYIPVSEQHWIGFLSLKSVERSDAGRYW 76 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-----EEEEEEEETTEEEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-----CceEEEecCCCceEEEEEeecCcccCeEEE
Confidence 355666777788999999999999999888999999998776311 1111111 358999999999999999
Q ss_pred EEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC-ceEEEeCCeeC
Q psy15128 111 CSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP-HIRWYKNGNSL 177 (292)
Q Consensus 111 C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~~~~~~l 177 (292)
|.+.+..+.. .....|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+
T Consensus 77 C~~~~~~~~~~~~~~~l~V~~-----~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 140 (182)
T 1rhf_A 77 CQVEDGGETEISQPVWLTVEG-----VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKI 140 (182)
T ss_dssp EEESSCTTCEECCCEEEEEEC-----SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEEC
T ss_pred EEEEcCCCcEEEEEEEEEEec-----CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeEC
Confidence 9999875542 3345555542 4455555555556666666666766666666 66666665544
No 95
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.92 E-value=7.4e-24 Score=158.33 Aligned_cols=127 Identities=24% Similarity=0.389 Sum_probs=86.6
Q ss_pred CccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ...........|.|.+++.+|+|.|+|.+.+..+.....
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 105 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRI-GGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGST-TCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccc-cceeeecCcceEEEecCCcccCEEEEEEEecccCccccc
Confidence 5678899999999999999999999999999876422211 111223344589999999999999999999987776666
Q ss_pred EEEEEEeecCCCCCeEE-eCCCCceecCCCeEEEEeEeccCCCCceEEEe
Q psy15128 124 AFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK 172 (292)
Q Consensus 124 ~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~ 172 (292)
..+.|...... ++.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 106 ~~l~V~~~~~~-~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~ 154 (231)
T 3ojm_B 106 YHLDVVERSRH-RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIK 154 (231)
T ss_dssp EEEEEECCCCC-CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEE
T ss_pred EEEEEEcCCCC-CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEE
Confidence 66666532211 12221 12344455566666666666666666666666
No 96
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=3.2e-25 Score=181.07 Aligned_cols=242 Identities=12% Similarity=0.176 Sum_probs=151.5
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe--ecc-C---------CCcceeEEee-----ecEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL--MFP-G---------NAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~--~~~-~---------~~~~~~~~~~-----~~~l~i~~ 100 (292)
.+....+.+|++++|.|.+.+.+ .+.+.|+|+. .... ... . ....+..... ...|.|.+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSS 84 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECS
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECC
Confidence 34556788999999999998753 5689999863 2211 000 0 0112333322 34799999
Q ss_pred CCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeCC
Q psy15128 101 VQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSLP 178 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~ 178 (292)
++.+|+|.|+|.+.+..+.......|.|......++.++...+. ..+.+|+.++|.|.+.+. |.+ .+.|++++..+.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~ 163 (434)
T 1igy_B 85 LTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 163 (434)
T ss_dssp BCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCC-CCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSS
T ss_pred CChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCc-cccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCC
Confidence 99999999999998754333334455554322222333333333 345789999999999876 666 899999987532
Q ss_pred CCC-ccEE----EcCCCcEEEEeeecCCCCCC----------------------------------cce-------E--E
Q psy15128 179 PED-TRIN----VSSSGSLQIDVLRDDFRAEP----------------------------------KDT-------R--V 210 (292)
Q Consensus 179 ~~~-~~~~----~~~~~~l~i~~~~~~d~g~~----------------------------------~~~-------~--~ 210 (292)
... .... ....+.|.|..+..+| |.| +.+ . +
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v 242 (434)
T 1igy_B 164 VHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTL 242 (434)
T ss_dssp EEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHH
T ss_pred eEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhc
Confidence 100 0000 0011246666666666 622 011 1 5
Q ss_pred eCCCceEEEeeCCCCCC----CCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccc
Q psy15128 211 ASGETALLECGPPKGQP----EPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 211 ~~g~~~~l~C~~~~~~p----~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
.+|+.+.|.|.+ .+.+ .+.|.|+++|..+............++.+. ....|.|..+...|+|.|+|.|.|..|
T Consensus 243 ~~G~~~~L~C~~-~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 243 LITVTPKVTCVV-VDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFR--VVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp STTSCCEEEEEE-CCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCC--CCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred ccCCCcEEEEEE-eccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEE--EEEEEEECHHHccCCCcEEEEEECCCC
Confidence 679999999999 5663 458999999987742221111111222221 233688899999999999999999999
Q ss_pred cc
Q psy15128 287 QQ 288 (292)
Q Consensus 287 ~~ 288 (292)
..
T Consensus 320 ~~ 321 (434)
T 1igy_B 320 PA 321 (434)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 97
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.91 E-value=8.3e-23 Score=147.98 Aligned_cols=123 Identities=21% Similarity=0.336 Sum_probs=86.1
Q ss_pred CCcEEeCCCccEEec-CCcEEEEEEEeeeCC--CeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGL-NGIASFQCVAEGSPL--PSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~-g~~~~l~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+.. +....+.+ |+.+.|.|.+.+.|. +.+.|++++..+.. .. . ...+..|.|.+++.+|+|.|+|.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~--~~----~-~~~~~~L~i~~~~~~d~G~Y~C~ 74 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTA--TR----K-NASNMEYRINKPRAEDSGEYHCV 74 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTT--CC----B-CCSEEEEEESSCCGGGCEEEEEE
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcc--cc----e-EeccEEEEEecCCcccCEEEEEE
Confidence 455555 33455556 999999999998876 78999999987631 11 1 11457899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEe
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK 172 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~ 172 (292)
+.+. +.......|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 75 ~~n~-~~~~~~~~l~V~~-----~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~ 128 (190)
T 2wv3_A 75 YHFV-SAPKANATIEVKA-----APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRK 128 (190)
T ss_dssp EEET-TEEEEEEEEEEEC-----CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEE
T ss_pred EEeC-CcccccEEEEEec-----CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEE
Confidence 9998 6666666666652 3444444444556666666666666666666666666
No 98
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.91 E-value=3.3e-24 Score=167.57 Aligned_cols=195 Identities=15% Similarity=0.173 Sum_probs=134.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC------------CCcEEeCCC-ccEEecCCcEEEEEEEe-eeCCCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA------------PPSFVVRPQ-DQKVGLNGIASFQCVAE-GSPLPS 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~~~~~ 67 (292)
|.+++.+|+|.|+|.+.|..|... . +.|.|.. +|.+...+. ...+.+|+.+.|.|.+. +.|.+.
T Consensus 62 I~~~~~~D~G~Y~C~~~n~~g~~~-s-~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~ 139 (312)
T 2y23_A 62 FKDLGMDDLGIYSCDVTDTDGIAS-S-YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAK 139 (312)
T ss_dssp ESSCCGGGCEEEEEEESSSCCCCE-E-EEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCE
T ss_pred ECcCCccCCEEEEEEEEeCCCcEE-E-EEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCE
Confidence 779999999999999998776433 3 5666642 555444333 67788999999999998 789999
Q ss_pred eEEEECCeEEeeccCCCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEee-----------
Q psy15128 68 VFWTQEGSQVLMFPGNAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSV----------- 131 (292)
Q Consensus 68 v~W~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~----------- 131 (292)
+.|++++..+... .+..... ...|.|.+++.+|+|.|+|.+.+... .....+.+...
T Consensus 140 v~W~~~~~~i~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 212 (312)
T 2y23_A 140 VNYIFNEKEIFEG-----PKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKA--TNHSTVVLVGDVFKKLQKEAEF 212 (312)
T ss_dssp EEEEETTEEECSS-----SSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSC--EEEEEEEECTHHHHHHHHHHHH
T ss_pred EEEEECCEECeeC-----CcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCc--eEEEEEEEcchhhhhhcccccc
Confidence 9999999876421 1122221 22499999999999999999976433 22233332100
Q ss_pred -----cCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC-ceEEEeCCeeCCCCCccEEEcC-CCcEEEEeeecCCCCC
Q psy15128 132 -----EDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP-HIRWYKNGNSLPPEDTRINVSS-SGSLQIDVLRDDFRAE 204 (292)
Q Consensus 132 -----~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~~W~~~~~~l~~~~~~~~~~~-~~~l~i~~~~~~d~g~ 204 (292)
....+|.+.... ...+.+|+.+.|.|.+.+.|.+ .+.|++++..+.... ++.... ...|.|.++..+|+|.
T Consensus 213 ~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~-~~~~~~~~~~L~I~~v~~~d~G~ 290 (312)
T 2y23_A 213 QRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-KHDFKDGICTLLITEFSKKDAGI 290 (312)
T ss_dssp HHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEEC-CC----CEEEEEECSCSGGGCEE
T ss_pred cccchhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCC-cEEEECCEEEEEECcCCHHHCEE
Confidence 001123333222 2568899999999999999888 899999999887432 222222 2589999999999885
Q ss_pred Ccc
Q psy15128 205 PKD 207 (292)
Q Consensus 205 ~~~ 207 (292)
|..
T Consensus 291 Y~C 293 (312)
T 2y23_A 291 YEV 293 (312)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 99
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.91 E-value=5.4e-23 Score=156.60 Aligned_cols=181 Identities=18% Similarity=0.248 Sum_probs=137.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+. ..+.|.|..++. ...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 52 i~~~~~~d~G~Y~C~~~~~~~s---~~~~l~v~~~~~-~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~- 126 (262)
T 3rjd_A 52 ITSASVNDSGEYRCQRGLSGRS---DPIQLEIHRGWL-LLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF- 126 (262)
T ss_dssp ESSCCGGGCEEEEEEESSSCCC---CCEEEEEECSSE-EEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-
T ss_pred EecCCcccCeEEEEEEecCCcc---ccEEEEEeccce-EecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-
Confidence 6789999999999999875443 237888887654 344556678899999999999 6677889999999987631
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA 160 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~ 160 (292)
......|.|.+++.+|.|.|+|.+.+..+.......+.|.. ..+++.+...+ ...+.+|+.+.|.|.+
T Consensus 127 ---------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~--~~~~p~~~~~~-~~~~~~g~~~~l~C~~ 194 (262)
T 3rjd_A 127 ---------FHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKE--LFPAPVLNASV-TSPLLEGNLVTLSCET 194 (262)
T ss_dssp ---------EEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEEC--SSCCCEEEESS-CSSEETTCCEEEEEEC
T ss_pred ---------cCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEecc--CCCCCeEeecC-ceeecCCCeEEEEeEc
Confidence 22356899999999999999999998876555555555543 33466666655 5568899999999999
Q ss_pred ccCCC-Cc----eEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC
Q psy15128 161 VGSPP-PH----IRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 161 ~~~p~-~~----~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~ 205 (292)
.+.|. +. +.|++++..+.. ......|.|.++..+|+|.|
T Consensus 195 ~~~p~~p~~~~~~~w~~~~~~~~~------~~~~~~L~i~~v~~~d~G~Y 238 (262)
T 3rjd_A 195 KLLLQRPGLQLYFSFYMGSKTLRG------RNTSSEYQILTARREDSGLY 238 (262)
T ss_dssp CCCCC-----EEEEEEETTEEEEE------EESCCEEEESSCCGGGCEEE
T ss_pred ccCCCCCCccEEEEEEeCCcEecc------cCCCceEEEEEechhhCeEE
Confidence 98875 43 789999887643 13456799999998888844
No 100
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.91 E-value=9e-23 Score=150.40 Aligned_cols=179 Identities=29% Similarity=0.554 Sum_probs=123.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecE-----EEEccCCCCCCeEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGT-----LRIQGVQKEDAGFFV 110 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-----l~i~~~~~~d~g~Y~ 110 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...............++. |.|.+++.+|+|.|+
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEE
Confidence 567777888889999999999999999999999999999876433221111122222232 445567899999999
Q ss_pred EEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC
Q psy15128 111 CSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS 189 (292)
Q Consensus 111 C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~ 189 (292)
|.+.+..+.. .....+.|... +. . +.
T Consensus 89 C~~~n~~g~~~~~~~~l~V~~~--------------------------------~~-~---------~~----------- 115 (212)
T 2v9r_A 89 CVARNYLGEAVSHDASLEVAIL--------------------------------RD-D---------FR----------- 115 (212)
T ss_dssp EEEEETTEEEECCCEEEEECEE--------------------------------CS-S---------CS-----------
T ss_pred EEEECCCCceeecceEEEEEec--------------------------------cc-c---------ce-----------
Confidence 9999876533 12223332210 00 0 00
Q ss_pred CcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccc
Q psy15128 190 GSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVL 269 (292)
Q Consensus 190 ~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 269 (292)
..+....+..|+.+.|.|.+..+.|.+.+.|+++|..+... ..++.... ..|.|..+
T Consensus 116 -------------~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~-~~~~~~~~---------~~L~i~~~ 172 (212)
T 2v9r_A 116 -------------QNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK-DERITIRG---------GKLMITYT 172 (212)
T ss_dssp -------------BCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT-STTEEEET---------TEEEESSC
T ss_pred -------------eCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC-cceEEccC---------CeEEEeeC
Confidence 00123457789999999997578899999999999988632 22333322 26889999
Q ss_pred cccccceeEEEEeeccccccc
Q psy15128 270 GALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 270 ~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..+|+|.|+|.|.|..|....
T Consensus 173 ~~~d~G~Y~C~a~N~~g~~~s 193 (212)
T 2v9r_A 173 RKSDAGKYVCVGTNMVGERES 193 (212)
T ss_dssp CGGGCEEEEEEEEETTEEEEC
T ss_pred CHhhCeeEEEEEecccCceec
Confidence 999999999999999998643
No 101
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.91 E-value=7.6e-23 Score=168.88 Aligned_cols=241 Identities=13% Similarity=0.189 Sum_probs=143.3
Q ss_pred eCCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEE--e-ec-c--------CCCcceeEEee-----ecEEEEc
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQV--L-MF-P--------GNAYGHLHVTQ-----EGTLRIQ 99 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~--~-~~-~--------~~~~~~~~~~~-----~~~l~i~ 99 (292)
..+....+.+|++++|.|.+.+.+ .+.+.|+|.. ... . .. . .....++.... ...|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 345677889999999999998754 5689999853 111 1 00 0 01123333322 3479999
Q ss_pred cCCCCCCeEEEEEEEeCCcC------eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-C-ceEE
Q psy15128 100 GVQKEDAGFFVCSALSVAGS------TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-P-HIRW 170 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~-~~~W 170 (292)
+++.+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+. ..+.+|+.++|.|.+.+. |. + .+.|
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W 163 (475)
T 1iga_A 86 SLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS-PTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVTW 163 (475)
T ss_pred CCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC-CcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEEE
Confidence 99999999999999986542 1223455554311 12333333222 223689999999999887 55 4 8999
Q ss_pred EeCCeeCCCCC-ccEEEcCCC------cEEEEeeecCCCCCC--------------------------------------
Q psy15128 171 YKNGNSLPPED-TRINVSSSG------SLQIDVLRDDFRAEP-------------------------------------- 205 (292)
Q Consensus 171 ~~~~~~l~~~~-~~~~~~~~~------~l~i~~~~~~d~g~~-------------------------------------- 205 (292)
++++....... .......++ .|.|..+..+|+|.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~ 243 (475)
T 1iga_A 164 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPS 243 (475)
T ss_pred cCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCC
Confidence 99875321100 000000111 234444444444411
Q ss_pred ---cce--------EEeCCCceEEEeeCCCCCCC---CeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccc
Q psy15128 206 ---KDT--------RVASGETALLECGPPKGQPE---PTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGA 271 (292)
Q Consensus 206 ---~~~--------~~~~g~~~~l~C~~~~~~p~---~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 271 (292)
+.. .+.+|+.+.|.|.+ .+.++ +.|.| ++..+............++.+. ....|.|..+..
T Consensus 244 ~~~p~v~~~~p~~~~~~~G~~v~L~C~~-~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~--~~~~L~I~~~~~ 318 (475)
T 1iga_A 244 CCHPRLSLHRPALEDLLLGSEANLTCTL-TGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYS--VSSVLPGCAEPW 318 (475)
T ss_pred CCCcEEEEcCCChHHhccCCceEEEEEE-EcccCCCceEEEE--CCCCcCCccccCceECCCCCEE--EEEEEEEchHHh
Confidence 001 14689999999998 56544 69999 4444421111111111122221 234688999999
Q ss_pred cccceeEEEEeeccccc
Q psy15128 272 LSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 272 ~~~g~y~C~a~n~~g~~ 288 (292)
.|+|.|+|.|.|..|..
T Consensus 319 ~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 319 NHGKTFTCTAAYPESKT 335 (475)
T ss_pred ccCCcEEEEEEcCCCCC
Confidence 99999999999999875
No 102
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.91 E-value=4.9e-24 Score=166.32 Aligned_cols=199 Identities=18% Similarity=0.217 Sum_probs=137.0
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEE--eCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFV--VRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+......+.+.+...|... ..+.......|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 78 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~ 157 (308)
T 4fom_A 78 LHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEME 157 (308)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCC
T ss_pred EccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccc
Confidence 789999999999999998644444443777777766544 34445555678899999975 578999999999987653
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEe-CCCCceecCCCeEEEE
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQV-GPSNQTLPLHSVAFLP 157 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~g~~v~l~ 157 (292)
..... .........+.|.|..+..+|.|.|+|.+.|..+.......+.+.+. .+|.+.. ......+..|+.++|.
T Consensus 158 ~~~~~-~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~---~~P~~~~~~~~~~~~~~g~~v~l~ 233 (308)
T 4fom_A 158 STTTS-FPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ---YAPEVSVTGYDGNWFVGRKGVNLK 233 (308)
T ss_dssp EEEEE-CTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC---EEEEECCBCCCSCEETTCCSCEEE
T ss_pred cccce-eeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe---cCCeeEEcccceeeeeccccEEEE
Confidence 21110 11111223457999999999999999999998776655544443321 1333332 3344556788999999
Q ss_pred eEeccCCCC-ceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCcc
Q psy15128 158 CQAVGSPPP-HIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPKD 207 (292)
Q Consensus 158 C~~~~~p~~-~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~~ 207 (292)
|.+.+.|.| .+.|+|++..+.... .......|.|.++..+|+|.|..
T Consensus 234 C~~~g~P~p~~v~W~k~~~~~~~~~---~~~~~~~l~i~~v~~~d~G~Y~C 281 (308)
T 4fom_A 234 CNADANPPPFKSVWSRLDGQWPDGL---LASDNTLHFVHPLTFNYSGVYIC 281 (308)
T ss_dssp CCEEEESCEEEEECCBSSSCCCSSC---BCSTTEEECCSCCCSCCCSEEEE
T ss_pred EEEecCCCCcEEEEEECCeECCCcE---EEcCCeEEEECCCChhhCEEEEE
Confidence 999999888 699999998876532 12222345677888999986543
No 103
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.91 E-value=7.4e-23 Score=150.83 Aligned_cols=185 Identities=18% Similarity=0.315 Sum_probs=119.9
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec-------cCCCcceeEEeeecEEEEccCCCCCCeEEE
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF-------PGNAYGHLHVTQEGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 110 (292)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ......+.... ...|.|.+++.+|+|.|+
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~ 81 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYT 81 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEE
Confidence 3445566778899999999999998888899999987553210 01111222222 378999999999999999
Q ss_pred EEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCC
Q psy15128 111 CSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSG 190 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~ 190 (292)
|.+.+..+.......+.+.+.. + |.. ...
T Consensus 82 C~~~~~~g~~~~~~~~~l~V~~---~---------------------------p~~---------------~~~------ 110 (212)
T 1f97_A 82 CMVSEEGGQNYGEVSIHLTVLV---P---------------------------PSK---------------PTI------ 110 (212)
T ss_dssp EEEEETTSSSEEEEEEEEEEEB---C---------------------------CCC---------------CEE------
T ss_pred EEEEccCCCcccEEEEEEEEEc---C---------------------------CCC---------------ccc------
Confidence 9999876633333333332211 0 000 000
Q ss_pred cEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCe-EeccCCCceEEecCCCccccccccccccccc
Q psy15128 191 SLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQ-FIDLESSKRVSILGDPWFDSRRSRSIFGSVL 269 (292)
Q Consensus 191 ~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 269 (292)
. ....+.+|+.+.|.|.+..+.|.+.+.|++++. .+.......................|.|..+
T Consensus 111 ----~----------~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 176 (212)
T 1f97_A 111 ----S----------VPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPV 176 (212)
T ss_dssp ----E----------CCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSC
T ss_pred ----C----------CccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEec
Confidence 0 012466789999999933889999999999998 7753322211111111111122346889999
Q ss_pred cccccceeEEEEeeccccc
Q psy15128 270 GALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 270 ~~~~~g~y~C~a~n~~g~~ 288 (292)
..+|+|.|+|.|.|..|..
T Consensus 177 ~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 177 TAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp CGGGCEEEEEEEECSSSCC
T ss_pred ChhhCcEEEEEEccccCCc
Confidence 9999999999999999987
No 104
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.91 E-value=2.3e-23 Score=163.88 Aligned_cols=200 Identities=19% Similarity=0.319 Sum_probs=123.6
Q ss_pred cccCCcCCCeeEEEEEEeccccc----ccccEEEEEeCCCcE-EeCCCccEEecCCcEEEEEEEeeeCCC--eeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER----ETKPALLTVHAPPSF-VVRPQDQKVGLNGIASFQCVAEGSPLP--SVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~----~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~--~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+|.. .+......+.+|+.+.|.|.+.+.|++ .+.|++++
T Consensus 78 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g 157 (327)
T 2wng_A 78 ISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNG 157 (327)
T ss_dssp ECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECC
Confidence 78999999999999999875531 123377888765432 122234567889999999999988765 89999999
Q ss_pred eEEeeccCC---CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecC
Q psy15128 75 SQVLMFPGN---AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPL 150 (292)
Q Consensus 75 ~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~ 150 (292)
..+...... ......+...+.|.|.....+|.|.|+|.+.|..+.. .......+... ...+|.+...+.. +.+
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~-v~~~P~i~~~~~~--~~~ 234 (327)
T 2wng_A 158 NELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET-IRVPPTLEVTQQP--VRA 234 (327)
T ss_dssp EECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT-BCBCCEEEEEEEC--CSS
T ss_pred EEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc-cCCCCEEEEecCC--cCC
Confidence 776321100 0001112233468888888888899999999987652 22222222111 1224445443333 779
Q ss_pred CCeEEEEeEeccC-CCC-ceEEEeCCeeCCCCC-ccEEEcCCCc------EEEEeeecCCCCC
Q psy15128 151 HSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPED-TRINVSSSGS------LQIDVLRDDFRAE 204 (292)
Q Consensus 151 g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~~-~~~~~~~~~~------l~i~~~~~~d~g~ 204 (292)
|+.+.|.|.+.+. |++ .+.|+++|.++.... .......++. |.|..+..+|+|.
T Consensus 235 G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~ 297 (327)
T 2wng_A 235 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVK 297 (327)
T ss_dssp TTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCE
T ss_pred CCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCE
Confidence 9999999999885 444 799999999875421 2233334443 4555555666663
No 105
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.91 E-value=5.2e-23 Score=151.34 Aligned_cols=188 Identities=14% Similarity=0.259 Sum_probs=119.5
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec-------cCCCcceeEEeeecEEEEccCCCCCCeE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF-------PGNAYGHLHVTQEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 108 (292)
+..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ......+.... ...|.|.+++.+|+|.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGT 82 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcE
Confidence 344555667788999999999999998888899999987553210 01112223222 3789999999999999
Q ss_pred EEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcC
Q psy15128 109 FVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSS 188 (292)
Q Consensus 109 Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~ 188 (292)
|+|.+.+..+.......+.+.+.. +|.+...+
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~---~p~~~~~~--------------------------------------------- 114 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLV---PPSKPTVN--------------------------------------------- 114 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEB---CCCCCCCC---------------------------------------------
T ss_pred EEEEEecCCCCccceEEEEEEEec---CCcCCCcc---------------------------------------------
Confidence 999999876533332222222110 10000000
Q ss_pred CCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccc
Q psy15128 189 SGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSV 268 (292)
Q Consensus 189 ~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 268 (292)
....+.+|+.+.|.|.+..+.|.+.+.|+++|..+.......................|.|..
T Consensus 115 -----------------~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 177 (209)
T 1nbq_A 115 -----------------IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDP 177 (209)
T ss_dssp -----------------CBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESS
T ss_pred -----------------cccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEe
Confidence 012355678888888755677777888888877765332221111111111112234688999
Q ss_pred ccccccceeEEEEeecccccc
Q psy15128 269 LGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 269 ~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+..+|+|.|+|.|+|..|...
T Consensus 178 ~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 178 LSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp CCGGGCCCEEEEEECSSSCCE
T ss_pred ccccCCeEEEEEEeCCcCccc
Confidence 999999999999999999983
No 106
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.91 E-value=1.5e-22 Score=149.85 Aligned_cols=164 Identities=21% Similarity=0.357 Sum_probs=114.8
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
.+.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .....|.|.+++.+|+|.|+|.+.+
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPN-----------GNTSELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTT-----------CCSSEEEETTCCGGGCEEEEEEEEC
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCC-----------CCCCEEEEccCChhhCeEeEEEEEc
Confidence 46777888889999999999999999888899999999987531 1246899999999999999999998
Q ss_pred CCcCe-eEEEEEEEEeecCC----------CCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccE
Q psy15128 116 VAGST-TVRAFLQVTSVEDT----------PPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRI 184 (292)
Q Consensus 116 ~~~~~-~~~~~l~v~~~~~~----------~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~ 184 (292)
..+.. .....+.|...... .++.+...+...
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~-------------------------------------- 128 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQ-------------------------------------- 128 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCE--------------------------------------
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCce--------------------------------------
Confidence 76643 33345555421100 001111122222
Q ss_pred EEcCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccc
Q psy15128 185 NVSSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSI 264 (292)
Q Consensus 185 ~~~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (292)
.+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..... ..|
T Consensus 129 ------------------------~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~~~----------------~~L 167 (218)
T 3k0w_A 129 ------------------------KLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHETK----------------KLY 167 (218)
T ss_dssp ------------------------EECTTCCEEEECEE-EBSSCCEEEEEETTEECTTCCS----------------SEE
T ss_pred ------------------------eecCCCcEEEEEEe-cccCCCeEEEEECCEECCCCCC----------------CEE
Confidence 34456777777776 6667777777777766642210 147
Q ss_pred ccccccccccceeEEEEeecccccc
Q psy15128 265 FGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 265 ~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
.|..+...|+|.|+|.|.|..|...
T Consensus 168 ~i~~v~~~d~G~Y~C~a~n~~g~~~ 192 (218)
T 3k0w_A 168 MVPYVDLEHQGTYWCHVYNDRDSQD 192 (218)
T ss_dssp EESSCCGGGCEEEEEEEECSSCEEE
T ss_pred EEeecChhcCEEEEEEEEcCCCCce
Confidence 7888899999999999999988743
No 107
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=163.21 Aligned_cols=197 Identities=16% Similarity=0.157 Sum_probs=139.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc-EEeCCCccEEecCCcEEEEEEEeeeCC--CeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS-FVVRPQDQKVGLNGIASFQCVAEGSPL--PSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|++++....
T Consensus 55 i~~~~~~d~G~Y~C~~~n~~~~~~~~-~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~ 132 (292)
T 4dkd_C 55 TNNATFQNTGTYRCTEPGDPLGGSAA-IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPL 132 (292)
T ss_dssp ESSCCGGGCSCEEECCCC----CCEE-ECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCC
T ss_pred EcccccccCEEEEEEEccCCCCcceE-EEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcc
Confidence 78999999999999999887766555 8888988776 455677788999999999999987 43 6899999743321
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEE
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLP 157 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~ 157 (292)
....+........|.|.+++.+|+|.|+|.+.+..+... ....|.|.... ..+|.+...+....+.+|+.+.|.
T Consensus 133 ----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~-~~~p~i~~~~~~~~~~~g~~v~l~ 207 (292)
T 4dkd_C 133 ----MRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVI-PGPPALTLVPAELVRIRGEAAQIV 207 (292)
T ss_dssp ----CSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCC-CSSCEEEEESSCBCCCSSSCEEEE
T ss_pred ----ccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC-CCCCeEEccCCceeEecCCCEEEE
Confidence 112223334455699999999999999999998765442 24555554321 125666666666667899999999
Q ss_pred eEeccCCC-CceEEEeCCeeCCCCCccEEEc-----CCCcEEEEeeecCCCCCCc
Q psy15128 158 CQAVGSPP-PHIRWYKNGNSLPPEDTRINVS-----SSGSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 158 C~~~~~p~-~~~~W~~~~~~l~~~~~~~~~~-----~~~~l~i~~~~~~d~g~~~ 206 (292)
|.+.+.|+ +.+.|++++..+..... .... ..+.|.|.++..+|+|.|.
T Consensus 208 C~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (292)
T 4dkd_C 208 CSASSVDVNFDVFLQHNNTKLAIPQQ-SDFHNNRYQKVLTLNLDQVDFQHAGNYS 261 (292)
T ss_dssp EEEEESSSCCEEECCBSSCCCCCCBE-EEEETTEEEEEEEEEESSCCTTSCEEEE
T ss_pred EEecCCCCceEEEEeCCCcccccCcc-ceeccceeeeEEEEEECccChhcCeEEE
Confidence 99987754 46888898887654321 1111 2247899999988888543
No 108
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.90 E-value=3.2e-23 Score=162.29 Aligned_cols=195 Identities=14% Similarity=0.161 Sum_probs=125.2
Q ss_pred cccCCcCCCeeEEEEEEeccc----ccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG----ERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+...+.. .+.+|+.++|.|.+. .+.+.+.|++++
T Consensus 78 I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g 155 (316)
T 3vh8_G 78 MSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWSD-IMFEHFFLHKEG 155 (316)
T ss_dssp ECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCS-EEETTCCEEEEEEES-SCCSEEEEEETT
T ss_pred ECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcCC-CCCcEEEEEECC
Confidence 778999999999999986422 2233337777754 3455555544 388999999999995 456689999998
Q ss_pred eEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe-----eEEEEEEEEeecCCCCCeEEeCCCCceec
Q psy15128 75 SQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST-----TVRAFLQVTSVEDTPPPIVQVGPSNQTLP 149 (292)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 149 (292)
..+..... ............|.|.+++.+|+|.|+|.+.|..+.. .....|.|. ....+|.+...+.. .+.
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~--~~~~~p~i~~~~~~-~v~ 231 (316)
T 3vh8_G 156 ISKDPSRL-VGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVT--GPYEKPSLSAQPGP-KVQ 231 (316)
T ss_dssp CCSCCEEE-ECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEE--CSSCCCEEEEESCS-CCC
T ss_pred Ccccccee-eeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEec--CCCCCCeEEeCCCC-eec
Confidence 75421100 0000011235689999999999999999999876631 223334443 33445666555443 578
Q ss_pred CCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC---CcEEEEeeecCCCCCC
Q psy15128 150 LHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS---GSLQIDVLRDDFRAEP 205 (292)
Q Consensus 150 ~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~---~~l~i~~~~~~d~g~~ 205 (292)
+|+.++|.|.+. .|.+.+.|+|+|..+............ +.|.|.++. |+|.|
T Consensus 232 ~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y 287 (316)
T 3vh8_G 232 AGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTY 287 (316)
T ss_dssp TTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEE
T ss_pred CCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEE
Confidence 999999999996 467899999999876532111111111 367888777 77743
No 109
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.90 E-value=2.7e-22 Score=145.50 Aligned_cols=127 Identities=27% Similarity=0.465 Sum_probs=92.7
Q ss_pred CCcEEeCCC--ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE-eeecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQ--DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-TQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
||.+...+. ...+.+|+.++|.|.+.+.|.+.+.|++++..+... .+... .....|.|.+++.+|+|.|+|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 76 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-----EKYILKGSNTELTVRNIINSDGGPYVCR 76 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS-----SSEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC-----ccEEEeCCeeEEEEecCChhcCcEEEEE
Confidence 455555443 456778999999999998898999999999876321 12222 2345899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeC
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKN 173 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~ 173 (292)
+.+..+.......|.|.. +|.+... ....+..|+.+.|.|.+.+.|.+.+.|+++
T Consensus 77 ~~~~~~~~~~~~~l~V~~-----~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~ 131 (192)
T 2va4_A 77 ATNKAGEDEKQAFLQVFV-----QPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRA 131 (192)
T ss_dssp EEETTEEEEEEEEEEEEE-----EEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEET
T ss_pred EEccccccceEEEEEEEc-----cCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeC
Confidence 999877766666666643 2333322 334566788888888888888888888887
No 110
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.90 E-value=1.5e-23 Score=159.06 Aligned_cols=193 Identities=17% Similarity=0.194 Sum_probs=107.3
Q ss_pred CCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeC-----CCeeEEEECC--eEE
Q psy15128 5 VKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSP-----LPSVFWTQEG--SQV 77 (292)
Q Consensus 5 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~v~W~~~~--~~~ 77 (292)
++++|+|.|+|.+. |..... +.+.+..++.+...+....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~-~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTN-YWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hhhhhh-hhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 68999999999998 333333 455555567777778888999999999999998876 3799999843 211
Q ss_pred e--e-----ccCCCcceeEEee---ecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCc
Q psy15128 78 L--M-----FPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQ 146 (292)
Q Consensus 78 ~--~-----~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~ 146 (292)
. . .......+..... ...|.|.+++.+|+|.|+|.+.+..+... ....+.|.. ...+|.+...+...
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~~ 164 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR--ADAAPTVSIFPPSS 164 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC--CCBCCEEEEECCCH
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC--CCCCCeeEeecCCh
Confidence 1 0 0111112333322 33899999999999999999988654321 122444432 22345555544433
Q ss_pred eecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCCC-CccEE--EcCC------CcEEEEeeecCCCC
Q psy15128 147 TLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPPE-DTRIN--VSSS------GSLQIDVLRDDFRA 203 (292)
Q Consensus 147 ~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~~-~~~~~--~~~~------~~l~i~~~~~~d~g 203 (292)
....|+.++|.|.+.+. |+ +.+.|+++|.++... ..... ...+ ..|.|.++..+|+|
T Consensus 165 ~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G 232 (254)
T 2c1o_A 165 EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 232 (254)
T ss_dssp HHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred hhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCC
Confidence 34468899999999874 44 459999999988654 11111 1112 25778888777777
No 111
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=5.9e-22 Score=149.00 Aligned_cols=135 Identities=27% Similarity=0.368 Sum_probs=100.5
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~ 122 (292)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ...........|.|.+++.+|+|.|+|.+.+..+....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 100 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI-GGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQ 100 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGST-TCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcc-cceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEE
Confidence 34567889999999999999888999999999876422211 11222334568999999999999999999998777766
Q ss_pred EEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEe----CCeeCC
Q psy15128 123 RAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK----NGNSLP 178 (292)
Q Consensus 123 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~----~~~~l~ 178 (292)
...+.|......++......+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.
T Consensus 101 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~ 160 (241)
T 3grw_A 101 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 160 (241)
T ss_dssp EEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSC
T ss_pred EEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccC
Confidence 77777654332333334444566678889999999999888888999998 554443
No 112
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.89 E-value=1.2e-24 Score=172.47 Aligned_cols=202 Identities=18% Similarity=0.181 Sum_probs=136.6
Q ss_pred CCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCccee
Q psy15128 9 DEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHL 88 (292)
Q Consensus 9 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~ 88 (292)
|.|.|+|.+.+.. .. +.+.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..
T Consensus 136 ~~~~~~C~~~~~l----~~-l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~----~~ 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPL----AH-MPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM----KS 206 (347)
T ss_dssp GGGCCCCSSSSCS----SC-CCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC----CC
T ss_pred cccCCCCCCChHH----hc-CCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc----cc
Confidence 5789999876622 11 333344578888888888899999999999999999999999998865421111 11
Q ss_pred EEeeecEEEEccCCCCCCe-EEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCc
Q psy15128 89 HVTQEGTLRIQGVQKEDAG-FFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPH 167 (292)
Q Consensus 89 ~~~~~~~l~i~~~~~~d~g-~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 167 (292)
.....+.|.|.+++.+|+| .|+|.+.+..+.....+.+.|.. +|.
T Consensus 207 ~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~----------------------------------~P~ 252 (347)
T 2ifg_A 207 GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF----------------------------------PAS 252 (347)
T ss_dssp CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE----------------------------------EEE
T ss_pred eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC----------------------------------CCe
Confidence 2234568999999999999 99999998876554433332210 000
Q ss_pred eEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCce
Q psy15128 168 IRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKR 247 (292)
Q Consensus 168 ~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~ 247 (292)
+ + ...+..|+.+.|.|.+ .|.|.|.+.|+++|..+.......
T Consensus 253 i--~-----------------------------------~~~~~~g~~v~l~C~~-~g~P~p~i~W~~~g~~l~~~~~~~ 294 (347)
T 2ifg_A 253 V--Q-----------------------------------LHTAVEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIF 294 (347)
T ss_dssp E--E-----------------------------------ECCCEESSSEEEEEEE-EEESCCEEEEEETTEECCCCSSEE
T ss_pred e--e-----------------------------------eccCccCceEEEEEEe-eecCCCcEEEEeCCEECCCCccee
Confidence 0 0 0001246788888887 788888889988888876332222
Q ss_pred EEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 248 VSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
................|.|..+..+|+|.|+|.|+|..|.++.+
T Consensus 295 ~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~ 338 (347)
T 2ifg_A 295 TEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 338 (347)
T ss_dssp EEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeE
Confidence 22222111111223368899999999999999999999988653
No 113
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.89 E-value=1.2e-21 Score=139.97 Aligned_cols=157 Identities=13% Similarity=0.090 Sum_probs=105.3
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCe-eEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPS-VFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~ 113 (292)
.+|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+. .....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~------------~~~~~L~i~~~~~~d~G~Y~C~~ 73 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS------------SQASSYFIDAATVNDSGEYRCQT 73 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEE------------SSCSEEEESSCCGGGCEEEEEEC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEcc------------CCceEEEEeCCCcccCEEEEEEe
Confidence 356677777777899999999999998887665 88999998763 13568999999999999999999
Q ss_pred EeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEE
Q psy15128 114 LSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQ 193 (292)
Q Consensus 114 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~ 193 (292)
.+..+ .....+.|.. ++..... ...
T Consensus 74 ~n~~~--s~~~~l~V~~-----~~~~~~~-~~~----------------------------------------------- 98 (175)
T 1fnl_A 74 NLSTL--SDPVQLEVHI-----GWLLLQA-PRW----------------------------------------------- 98 (175)
T ss_dssp SSSCC--CCCEEEEEEC-----SSEEEEC-SCS-----------------------------------------------
T ss_pred eCCcc--cccEEEEEeC-----CCceeeC-CCc-----------------------------------------------
Confidence 87433 2223333320 1111111 111
Q ss_pred EEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccc
Q psy15128 194 IDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALS 273 (292)
Q Consensus 194 i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 273 (292)
.+.+|+.+.|.|.+..+.|.+.+.|+++|..+... . ....|.|..+..+|
T Consensus 99 ---------------~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~------~---------~~~~L~i~~v~~~d 148 (175)
T 1fnl_A 99 ---------------VFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF------H---------HNSDFHIPKATLKD 148 (175)
T ss_dssp ---------------EEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE------E---------ECCCEEESSCCGGG
T ss_pred ---------------eecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC------C---------CCCEEEEcccChhh
Confidence 23446667777766222333477777776665210 0 11257888999999
Q ss_pred cceeEEEEeeccccc
Q psy15128 274 DDQWKLIAKNIRNQQ 288 (292)
Q Consensus 274 ~g~y~C~a~n~~g~~ 288 (292)
+|.|+|.|.|..|..
T Consensus 149 ~G~Y~C~a~n~~~~~ 163 (175)
T 1fnl_A 149 SGSYFCRGLVGSKNV 163 (175)
T ss_dssp CEEEEEEEEETTEEE
T ss_pred CeEEEEEEEcCCCCc
Confidence 999999999977654
No 114
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.89 E-value=3.4e-21 Score=141.51 Aligned_cols=172 Identities=13% Similarity=0.158 Sum_probs=109.5
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeE-----Eee---------ccCCCcceeEEeeecEEEEccCCCCCCe
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQ-----VLM---------FPGNAYGHLHVTQEGTLRIQGVQKEDAG 107 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 107 (292)
.+.+..+.+|+.++|.|...+.+.+.+.|++++.. +.. .......+.....++.|.|.+++.+|+|
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 5 EAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMG 84 (208)
T ss_dssp EEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCE
T ss_pred cCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCe
Confidence 34456788999999999987778889999987431 110 0111123444445568999999999999
Q ss_pred EEEEEEEeCCc-CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEE
Q psy15128 108 FFVCSALSVAG-STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINV 186 (292)
Q Consensus 108 ~Y~C~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~ 186 (292)
.|+|.+.+..+ .......|.|. .....+.+...+.
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~--~~~~~p~i~~~~~------------------------------------------ 120 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVH--QPVTQPFLQVTNT------------------------------------------ 120 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEE--CCCCCCEEEESCS------------------------------------------
T ss_pred EEEEEEEcccCceeEEEEEEEec--cCCCCCEEecCCc------------------------------------------
Confidence 99999998743 23333333332 1111111111111
Q ss_pred cCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccc
Q psy15128 187 SSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFG 266 (292)
Q Consensus 187 ~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 266 (292)
. +.+|+.+.|.|.+ .+.| +.+.|+++|..+. ...++.+..++ ..|.|
T Consensus 121 --------------------~--~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l~--~~~~~~~~~~~-------~~L~i 167 (208)
T 3r4d_A 121 --------------------T--VKELDSVTLTCLS-NDIG-ANIQWLFNSQSLQ--LTERMTLSQNN-------SILRI 167 (208)
T ss_dssp --------------------S--CCTTCCEEEEEEC-SCTT-CEEEEEETTEECC--CCSSEEEETTT-------TEEEE
T ss_pred --------------------e--EeeCCCEEEEEEC-CCCC-CceEEEECCEeCC--CCCCeEEcCCC-------CEEEE
Confidence 1 3456777777776 5544 5777777777664 22233332221 25888
Q ss_pred ccccccccceeEEEEeeccccccc
Q psy15128 267 SVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 267 ~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..+..+|+|.|+|.|.|..|++..
T Consensus 168 ~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 168 DPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp SSCCGGGCEEEEEEEECTTCCEEC
T ss_pred eccCHHhCeEEEEEEecCCCcccC
Confidence 899999999999999999998753
No 115
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.89 E-value=8.4e-22 Score=142.90 Aligned_cols=161 Identities=26% Similarity=0.471 Sum_probs=126.0
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe-eecEEEEccCCCCCCeEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT-QEGTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~C~~ 113 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..+.... ....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLF----DTRYSIRENGQLLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTT----CTTEEEEGGGTEEEESSCCGGGCEEEEEEE
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEcccc----CccEEEcCCccEEEEcCCCcccCeEEEEEE
Confidence 3455666666778899999999999999999999999998876321 1222222 3347999999999999999999
Q ss_pred EeCCcC-eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 114 LSVAGS-TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 114 ~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
.+..+. ......+.+.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++....++.|
T Consensus 82 ~~~~~~~~~~~~~l~v~~-----~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-~~~~~~~~~~L 155 (192)
T 2iep_A 82 NNGVGGAVESCGALQVKM-----KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN-SRIAVLESGSL 155 (192)
T ss_dssp ECSSSCCEEEEEEEEEEE-----EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC-SSEEECTTSCE
T ss_pred EcCCCceeEeEEEEEEEe-----CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC-CcEEEecCCcE
Confidence 988766 34445566654 455666667778889999999999999999999999999988764 45666677899
Q ss_pred EEEeeecCCCCCC
Q psy15128 193 QIDVLRDDFRAEP 205 (292)
Q Consensus 193 ~i~~~~~~d~g~~ 205 (292)
.|.++..+|+|.|
T Consensus 156 ~i~~~~~~d~G~Y 168 (192)
T 2iep_A 156 RIHNVQKEDAGQY 168 (192)
T ss_dssp EESSCCGGGCEEE
T ss_pred EEecCChhhCEEE
Confidence 9999999888854
No 116
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.88 E-value=1.2e-21 Score=139.87 Aligned_cols=154 Identities=17% Similarity=0.191 Sum_probs=103.6
Q ss_pred cEEecCCcEEEEEEEee--eCCCeeEEEECCeEEeeccC-----CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCc
Q psy15128 46 QKVGLNGIASFQCVAEG--SPLPSVFWTQEGSQVLMFPG-----NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG 118 (292)
Q Consensus 46 ~~~~~g~~~~l~C~~~~--~~~~~v~W~~~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~ 118 (292)
+.+.+|++++|.|.... .+.+.|.|+|++..+..... ....+.....++.|.|.+++.+|+|.|+|.+.|..+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g 85 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNG 85 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTC
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCC
Confidence 45788999999994332 45668999999976542111 012344444566799999999999999999999887
Q ss_pred Ce--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEe
Q psy15128 119 ST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDV 196 (292)
Q Consensus 119 ~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~ 196 (292)
.. .....|.|.. ... .|.+..
T Consensus 86 ~~~~~~~~~l~V~~--~~~-----------------------------~p~i~~-------------------------- 108 (176)
T 1hng_A 86 TRILNKALDLRILE--MVS-----------------------------KPMIYW-------------------------- 108 (176)
T ss_dssp CEEEEEEEEEEEEC--CCC-----------------------------CCEEEE--------------------------
T ss_pred CEEEEEEEEEEEeC--CCC-----------------------------CCEEEe--------------------------
Confidence 75 3333333321 000 011110
Q ss_pred eecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccce
Q psy15128 197 LRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQ 276 (292)
Q Consensus 197 ~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 276 (292)
.+..+.|.|.+ .+.|.|.|.|+++|+++.... .+.+..+...|+|.
T Consensus 109 ---------------~~~~v~L~C~~-~g~p~p~i~W~~~g~~l~~~~------------------~~~i~~~~~~d~G~ 154 (176)
T 1hng_A 109 ---------------ECSNATLTCEV-LEGTDVELKLYQGKEHLRSLR------------------QKTMSYQWTNLRAP 154 (176)
T ss_dssp ---------------ETTTTEEEEEC-SSCSSCEEEEEETTEEEEEES------------------SSEEEEECSCCSSC
T ss_pred ---------------cCCcEEEEEEe-cCCCCcEEEEEECCEECCCCC------------------cEEEEEEEccCCeE
Confidence 01237899998 788889999999998874221 12334566889999
Q ss_pred eEEEEeeccccccc
Q psy15128 277 WKLIAKNIRNQQQH 290 (292)
Q Consensus 277 y~C~a~n~~g~~~~ 290 (292)
|+|.|.|.+|.++.
T Consensus 155 Y~C~a~N~~g~~~~ 168 (176)
T 1hng_A 155 FKCKAVNRVSQESE 168 (176)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEEecCCCcee
Confidence 99999999998764
No 117
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.88 E-value=2.5e-21 Score=141.55 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=102.9
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCe-eEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPS-VFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+.. ....|.|.+++.+|+|.|+|.+.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~------------~~~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISS------------QASSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESC------------CSSEEEESSCCGGGCEEEEEEET
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEccc------------CccEEEEecccccCCEEEEEEeC
Confidence 45666677778899999999999999887665 999999987631 12689999999999999999987
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEE
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQI 194 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i 194 (292)
+... .....|.|.. ++.+...+.
T Consensus 75 n~~~--s~~~~l~V~~-----~p~~~~~~~-------------------------------------------------- 97 (204)
T 3sgj_C 75 LSTL--SDPVQLEVHI-----GWLLLQAPR-------------------------------------------------- 97 (204)
T ss_dssp TSBC--CCCEEEEEEC-----SSEEEECSC--------------------------------------------------
T ss_pred CCcc--cccEEEEEec-----CceEecCCc--------------------------------------------------
Confidence 6322 2223333321 111111111
Q ss_pred EeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccccccccccccc
Q psy15128 195 DVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSD 274 (292)
Q Consensus 195 ~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 274 (292)
..+.+|+.++|.|.+..+.|.+.+.|+++|..+.... ....|.|..+..+|+
T Consensus 98 -------------~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~---------------~~~~L~i~~v~~~D~ 149 (204)
T 3sgj_C 98 -------------WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH---------------HNSDFYIPKATLKDS 149 (204)
T ss_dssp -------------SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE---------------ECCCEEESSCCGGGC
T ss_pred -------------eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc---------------CCceEEECcCCcccC
Confidence 1344566677777663334556677777666552100 012578889999999
Q ss_pred ceeEEEEeeccc
Q psy15128 275 DQWKLIAKNIRN 286 (292)
Q Consensus 275 g~y~C~a~n~~g 286 (292)
|.|+|.|.|..+
T Consensus 150 G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 150 GSYFCRGLVGSK 161 (204)
T ss_dssp EEEEEEEEETTE
T ss_pred EEEEEEEEeCCC
Confidence 999999999444
No 118
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=5e-21 Score=138.45 Aligned_cols=157 Identities=22% Similarity=0.376 Sum_probs=118.4
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEE-CCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEEEEE
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ-EGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
+...+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+. ...+...... ..|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 78 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKII-----STQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 78 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCC-----CCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccC-----CCceEEEECCCCeEEEEEccCCcccCeEEEEEEE
Confidence 344566778899999999999988877 999999 555432 1122333333 489999999999999999999
Q ss_pred eCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCC-CCccEEEcCCCcE
Q psy15128 115 SVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPP-EDTRINVSSSGSL 192 (292)
Q Consensus 115 ~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~-~~~~~~~~~~~~l 192 (292)
+..+.. .....+.+.. +|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.. ...++....++.|
T Consensus 79 ~~~g~~~~~~~~l~v~~-----~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L 153 (189)
T 2v44_A 79 DAKGQTQEATVVLEIYQ-----KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 153 (189)
T ss_dssp CTTSCEEEEEEEEEEEC-----CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCE
T ss_pred eCCCCcEEEEEEEEEec-----CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcE
Confidence 887765 4445555542 45666566677889999999999999999999999999987753 2356667778899
Q ss_pred EEEeeecCCCCCCc
Q psy15128 193 QIDVLRDDFRAEPK 206 (292)
Q Consensus 193 ~i~~~~~~d~g~~~ 206 (292)
.|.++..+|+|.|.
T Consensus 154 ~i~~v~~~d~G~Y~ 167 (189)
T 2v44_A 154 QILNINKSDEGIYR 167 (189)
T ss_dssp EETTCCGGGCEEEE
T ss_pred EEEEcCcccCeEEE
Confidence 99999999888553
No 119
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=147.54 Aligned_cols=136 Identities=13% Similarity=0.172 Sum_probs=104.9
Q ss_pred CceecCCCeEEEEeEecc-CCCCceEEEeCCeeCCCCCcc-EEEcC-CC--cEEEEeeecCCCCCCcc------------
Q psy15128 145 NQTLPLHSVAFLPCQAVG-SPPPHIRWYKNGNSLPPEDTR-INVSS-SG--SLQIDVLRDDFRAEPKD------------ 207 (292)
Q Consensus 145 ~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~~~~l~~~~~~-~~~~~-~~--~l~i~~~~~~d~g~~~~------------ 207 (292)
...+.+|+.+.|.|.+.. .|.|.+.|+++|.++...... +.... .+ .|.|.++..+|+|.|..
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~ 90 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 90 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEE
Confidence 456889999999999864 689999999999999765332 22222 13 58999999999995532
Q ss_pred -----------------------------------eEEeCCCceEEEeeCCCCC-CCCeEEEeEcCeEeccCCCceEEec
Q psy15128 208 -----------------------------------TRVASGETALLECGPPKGQ-PEPTLHWKKNGQFIDLESSKRVSIL 251 (292)
Q Consensus 208 -----------------------------------~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~~~~~~~~~~~~~ 251 (292)
..+.+|+.+.|.|.+ .+. |.|.+.|+|+|+++.. +.++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v-~g~~P~p~i~W~k~g~~l~~--~~~~~~~ 167 (207)
T 3rbs_A 91 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKV-ANIKKETHIVWYKDEREISV--DEKHDFK 167 (207)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEE-ESCCTTCEEEEEETTEEECC--CCCCCCS
T ss_pred EEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEE-eCCCCCCEEEEEECCEECCC--CCceEcC
Confidence 346689999999998 777 9999999999999953 2222111
Q ss_pred CCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 252 GDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 252 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.....|.|..+..+|+|.|+|.|.|.+|.++.
T Consensus 168 -------~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 199 (207)
T 3rbs_A 168 -------DGICTLLITEFSKKDAGIYEVILKDDRGKDKS 199 (207)
T ss_dssp -------SEEEEEEETTCCGGGCEEEEEEEEETTEEEEE
T ss_pred -------CCEEEEEECCCCcccCEEEEEEEEcCCCEEEE
Confidence 11235889999999999999999999998864
No 120
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.87 E-value=1.7e-21 Score=139.29 Aligned_cols=124 Identities=20% Similarity=0.297 Sum_probs=79.6
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCC-eeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLP-SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
..+|.+...+....+.+|+.++|.|.+.+.+.+ .+.|++++..+. .....|.|.+++.+|+|.|+|.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~------------~~~~~L~i~~v~~~d~G~Y~C~ 69 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE------------ETNSSLNIVNAKFEDSGEYKCQ 69 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECS------------CCSSEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECC------------CCceEEEEeccceecCEEEEEE
Confidence 346777788888889999999999999887764 699999997652 1256899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec-cCCCCceEEEeCCeeC
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV-GSPPPHIRWYKNGNSL 177 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~l 177 (292)
+.+..+.. ...+.|. .++.... +....+.+|+.+.|.|.+. +.|.+.+.|+++|..+
T Consensus 70 ~~~~~~s~--~~~l~V~-----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~ 127 (176)
T 1f2q_A 70 HQQVNESE--PVYLEVF-----SDWLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEAL 127 (176)
T ss_dssp CTTSSCCC--CEEEEEE-----CSSEEEE-ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEEC
T ss_pred cCCccccc--cEEEEEe-----Ccceeec-CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEE
Confidence 98754432 3344443 1222221 1223445566666666552 3344455555555433
No 121
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=2e-21 Score=143.15 Aligned_cols=186 Identities=13% Similarity=0.138 Sum_probs=110.1
Q ss_pred ecCCcEEEEEEEeee-CCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 49 GLNGIASFQCVAEGS-PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 49 ~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
..++.+.|.|.+.+. |.+.+.|++++..+... .............|.|.+++.+|+|.|+|.+.+..+.......+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS--DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCC--SSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCC--CeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 356778888888774 57899999999876421 111111111223699999999999999999999766555444333
Q ss_pred EEeecCCCCCeEEeCCCCceecCCCeEEEEeE-eccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCc
Q psy15128 128 VTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQ-AVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 128 v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~-~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~ 206 (292)
+........ ... .+.-. ....+.|.+... .+.
T Consensus 93 v~~~~~~~~----------~~~-----~~~~~~~~~~~~p~~~~~--------------------------------~~~ 125 (212)
T 2r15_A 93 GQAYDEAYA----------EFQ-----RLKQAAIAEKNRARVLGG--------------------------------LPD 125 (212)
T ss_dssp HHHHHHHHH----------HHH-----HHHHHHHHHHHSCEEEEB--------------------------------CCS
T ss_pred Eeeccchhh----------hcc-----ccCcccccccCCCccccc--------------------------------CCC
Confidence 221000000 000 00000 000001111000 012
Q ss_pred ceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccc
Q psy15128 207 DTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 207 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
...+.+|+.+.|.|.+ .+.|.+.+.|+++|.++.......+....+ ....|.|..+..+|+|.|+|.|.|..|
T Consensus 126 ~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~N~~g 198 (212)
T 2r15_A 126 VVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALAQTDHCNLKFEAG------RTAYFTINGVSTADSGKYGLVVKNKYG 198 (212)
T ss_dssp EEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEETT------TEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cEEEccCCeEEEEEEE-cCCCCceEEEEECCeECccCCCEEEEEcCC------CEEEEEEcCcchHHCeEEEEEEEcCCC
Confidence 3456677888888887 677878888888887775333222222211 113688899999999999999999999
Q ss_pred cccc
Q psy15128 287 QQQH 290 (292)
Q Consensus 287 ~~~~ 290 (292)
..+.
T Consensus 199 ~~~~ 202 (212)
T 2r15_A 199 SETS 202 (212)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 8764
No 122
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.87 E-value=1.1e-21 Score=155.39 Aligned_cols=192 Identities=18% Similarity=0.242 Sum_probs=119.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CC-CeeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PL-PSVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|.. +|.+...+....+.+|+.++|.|.+.|. |. +.+.|++++.
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~~~~-~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 161 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYWGQG-TLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 161 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEECCC-EEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTB
T ss_pred ECCCCcccCEEEEEEEecCcceecCc-EEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCc
Confidence 78999999999999998854333333 7888873 4444443333345789999999999986 54 6999999886
Q ss_pred EEeec--cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe-------------------ecCC
Q psy15128 76 QVLMF--PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS-------------------VEDT 134 (292)
Q Consensus 76 ~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~-------------------~~~~ 134 (292)
.+... .........+...+.|.|.++..+| |.|+|.+.|..+.......+.+.+ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 240 (344)
T 1za6_B 162 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQP 240 (344)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CC
T ss_pred cCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCC
Confidence 42110 0000000112233479999998888 999999999877654433332110 0112
Q ss_pred CCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceEEEeCCeeCCCCC-ccEEEcCCCcEEEE
Q psy15128 135 PPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWYKNGNSLPPED-TRINVSSSGSLQID 195 (292)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~l~~~~-~~~~~~~~~~l~i~ 195 (292)
.+|.+.+.+.......|..++|.|.+.+. | .+.+.|+++|..+.... .......++++.+.
T Consensus 241 ~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~ 304 (344)
T 1za6_B 241 REPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLY 304 (344)
T ss_dssp BCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEE
T ss_pred cCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEE
Confidence 23444433332223356679999999885 4 35799999998876421 12223445555443
No 123
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=2.7e-21 Score=149.35 Aligned_cols=190 Identities=11% Similarity=0.110 Sum_probs=118.2
Q ss_pred cccCCcCCCeeEEEEEEeccccccccc--EEEEEeCCCcEEe-CCCc---cEEecCCcEEEEEEEeeeCCCeeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKP--ALLTVHAPPSFVV-RPQD---QKVGLNGIASFQCVAEGSPLPSVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~--~~l~v~~~p~~~~-~~~~---~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.|..|...... +.|.|..++.... .... ..+.+|+.+.|.|.+. .|.+.+.|++.+.
T Consensus 55 i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~ 133 (289)
T 3mjg_X 55 LTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKG 133 (289)
T ss_dssp ECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSC
T ss_pred EccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCC
Confidence 788999999999999999876633222 4444443322111 1111 5688899999999998 6778999998753
Q ss_pred EEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE-EEEEEEEeecCCCCCeEEeCCCCceecCCCeE
Q psy15128 76 QVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV-RAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVA 154 (292)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v 154 (292)
..... ........+. ...|+|.|+|.+.+..+.... ...+.+. .. .++.+...+....+.+|+.+
T Consensus 134 ~~~~~-------~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~--~~-~~p~i~~~~~~~~v~~G~~v 199 (289)
T 3mjg_X 134 DVALP-------VPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRL--QV-SSINVSVNAVQTVVRQGENI 199 (289)
T ss_dssp CSCCC-------CCEETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEEC--CC-CCCCCEEEESCSEEETTSCE
T ss_pred CCccc-------eeecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEec--CC-CCCCcEEeCCcceeEcCCCE
Confidence 22111 0011111121 357999999999876544322 2333333 22 34444445555678999999
Q ss_pred EEEeEeccCCCCceEEEeCCeeCCCCCccE-EEc------CCCcEEEEeeecCCCCCCc
Q psy15128 155 FLPCQAVGSPPPHIRWYKNGNSLPPEDTRI-NVS------SSGSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 155 ~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~-~~~------~~~~l~i~~~~~~d~g~~~ 206 (292)
.|.|.+.+.|.+.+.|++++.......... ... ..+.|.|.++..+|+|.|.
T Consensus 200 ~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 258 (289)
T 3mjg_X 200 TLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYT 258 (289)
T ss_dssp EEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEE
T ss_pred EEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEE
Confidence 999999999999999998776543322211 111 1247999999999988553
No 124
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=1.2e-21 Score=143.01 Aligned_cols=177 Identities=20% Similarity=0.282 Sum_probs=118.9
Q ss_pred CCCccEEecCCcEEEEEE-EeeeCC-CeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 42 RPQDQKVGLNGIASFQCV-AEGSPL-PSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~-~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
.+....+.+|+.+.|.|. +.+.|. +.+.|++++..+.... .........++.|.|.+++.+|+|.|+|.+.+..+.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 91 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITM--DKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 91 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCC--SSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeee--CCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCC
Confidence 346678999999999999 888888 8999999987653211 122223334568999999999999999999986554
Q ss_pred eeEEE-EEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeee
Q psy15128 120 TTVRA-FLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLR 198 (292)
Q Consensus 120 ~~~~~-~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~ 198 (292)
..... .+.+.... .. .....+|.+ .+.
T Consensus 92 ~~~~~~~~~~~~~~-----------~~--------------~~~~~~p~~------------------------~~~--- 119 (201)
T 3s97_C 92 KSVFSKFIPLIPIP-----------ER--------------TTKPYPADI------------------------VVQ--- 119 (201)
T ss_dssp EEEECCCEEEEEEC-----------CS--------------SCCCEEEEE------------------------EEE---
T ss_pred cchhhcccceeecc-----------cc--------------ccCCCCCce------------------------Eec---
Confidence 33211 11111100 00 000000000 000
Q ss_pred cCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeE
Q psy15128 199 DDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 199 ~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ...++... ...|.|..+...|+|.|+
T Consensus 120 ------~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~--~~~~~~~~---------~~~L~i~~v~~~d~G~Y~ 181 (201)
T 3s97_C 120 ------FKDVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPMP--STAEISTS---------GAVLKIFNIQLEDEGIYE 181 (201)
T ss_dssp ------CCCEEEETTCCEEEEEEE-EEESCCEEEEEETTBCCC--TTCEEETT---------TTEEEECSCCGGGCEEEE
T ss_pred ------CCceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcCC--CceeecCC---------CCEEEEccCChhhCEEEE
Confidence 024567789999999998 888999999999998774 22222211 226889999999999999
Q ss_pred EEEeeccccccc
Q psy15128 279 LIAKNIRNQQQH 290 (292)
Q Consensus 279 C~a~n~~g~~~~ 290 (292)
|.|.|..|..+.
T Consensus 182 C~a~n~~g~~~~ 193 (201)
T 3s97_C 182 CEAENIRGKDKH 193 (201)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEecCCceee
Confidence 999999998764
No 125
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.87 E-value=1.6e-21 Score=143.82 Aligned_cols=171 Identities=16% Similarity=0.202 Sum_probs=106.1
Q ss_pred CccEEecCCcEEEEEEEeeeC----CCeeEEEECC----------------eEEeeccCCCcceeEEe------eecEEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGSP----LPSVFWTQEG----------------SQVLMFPGNAYGHLHVT------QEGTLR 97 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~----~~~v~W~~~~----------------~~~~~~~~~~~~~~~~~------~~~~l~ 97 (292)
..+.+.+|+.++|.|.+.+.+ .+.+.|++.+ ............+.... ....|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 456788999999999998766 4689999832 22210000112233332 245799
Q ss_pred EccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeC
Q psy15128 98 IQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSL 177 (292)
Q Consensus 98 i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l 177 (292)
|.+++.+|+|.|+|.+.+..+.......|.|... ...+... .
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~--p~~~~~~---~--------------------------------- 129 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK--PSGTRCF---V--------------------------------- 129 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC--CBSCEEE---E---------------------------------
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcC--CCCceee---e---------------------------------
Confidence 9999999999999999987765555555554320 0000000 0
Q ss_pred CCCCccEEEcCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccc
Q psy15128 178 PPEDTRINVSSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFD 257 (292)
Q Consensus 178 ~~~~~~~~~~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 257 (292)
...+..|+.+.|.|.+..+.|.+.+.|++++...........
T Consensus 130 -----------------------------~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~--------- 171 (214)
T 3jz7_A 130 -----------------------------DGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA--------- 171 (214)
T ss_dssp -----------------------------ESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG---------
T ss_pred -----------------------------ecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee---------
Confidence 001345677777777645677777777774321111111111
Q ss_pred cccccccccccccccccceeEEEEeeccccccc
Q psy15128 258 SRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 258 ~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
......|.|..+..+|+|.|+|.|+|..|.++.
T Consensus 172 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~ 204 (214)
T 3jz7_A 172 EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQC 204 (214)
T ss_dssp GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEE
Confidence 111226889999999999999999999998864
No 126
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=7.5e-22 Score=143.16 Aligned_cols=143 Identities=22% Similarity=0.383 Sum_probs=114.1
Q ss_pred CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC-CcEEEEeeecCCCCC----------
Q psy15128 136 PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS-GSLQIDVLRDDFRAE---------- 204 (292)
Q Consensus 136 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~-~~l~i~~~~~~d~g~---------- 204 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....++....+ ..|.|.++..+|+|.
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVG 86 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSS
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCC
Confidence 345555566677889999999999998888999999999998765555555444 358999999999982
Q ss_pred --------------------CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccc
Q psy15128 205 --------------------PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSI 264 (292)
Q Consensus 205 --------------------~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (292)
+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+. ...++....++ .|
T Consensus 87 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~--~~~~~~~~~~~--------~L 155 (192)
T 2iep_A 87 GAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSALR--ENSRIAVLESG--------SL 155 (192)
T ss_dssp CCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEECC--CCSSEEECTTS--------CE
T ss_pred ceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEcc--CCCcEEEecCC--------cE
Confidence 235567899999999998 889999999999999885 33344333332 58
Q ss_pred ccccccccccceeEEEEeecccccc
Q psy15128 265 FGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 265 ~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
.|..+...|+|.|+|.|.|..|...
T Consensus 156 ~i~~~~~~d~G~Y~C~a~n~~g~~~ 180 (192)
T 2iep_A 156 RIHNVQKEDAGQYRCVAKNSLGTAY 180 (192)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEecCChhhCEEEEEEEEcCCCcEE
Confidence 8999999999999999999999874
No 127
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.87 E-value=2.2e-20 Score=155.28 Aligned_cols=243 Identities=12% Similarity=0.137 Sum_probs=138.7
Q ss_pred CCCccEEecCCcEEEEEEEeeeCC----CeeEEEECC--eEE--ee--cc-------CCCcceeEEee-----ecEEEEc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPL----PSVFWTQEG--SQV--LM--FP-------GNAYGHLHVTQ-----EGTLRIQ 99 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~----~~v~W~~~~--~~~--~~--~~-------~~~~~~~~~~~-----~~~l~i~ 99 (292)
.+..+.+.+|+.++|.|.+.+.+. ..+.|||.. ... .. .. .....++.... ...|.|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 345677889999999999986532 579999852 211 11 00 01123443332 3589999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----------C--eeEEEEEEEEeecCCCCCeEE-eCCCCceecCCCeEEEEeEeccC-C
Q psy15128 100 GVQKEDAGFFVCSALSVAG-----------S--TTVRAFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVGS-P 164 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~-----------~--~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~-p 164 (292)
+++.+|+|.|.|.+.+..+ . ......|.|...... +|.+. ..+.......|+.++|.|.+.+. |
T Consensus 86 ~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~-~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTK-APDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred cCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCc-CCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 9999999999999987532 0 112344555432112 23332 22221102246899999999887 6
Q ss_pred CC-ceEEEeCCeeCCCCCccEEEcCCC------cEEEEeeecCCCCC---------------------------------
Q psy15128 165 PP-HIRWYKNGNSLPPEDTRINVSSSG------SLQIDVLRDDFRAE--------------------------------- 204 (292)
Q Consensus 165 ~~-~~~W~~~~~~l~~~~~~~~~~~~~------~l~i~~~~~~d~g~--------------------------------- 204 (292)
.+ .+.|++++..............++ .|.|.....+ .|.
T Consensus 165 ~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~ 243 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTA 243 (512)
T ss_pred CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeC
Confidence 55 899999754321000000000011 1222222211 120
Q ss_pred -----------------------------------------------------C-------cceEEeCCCceEEEeeCCC
Q psy15128 205 -----------------------------------------------------P-------KDTRVASGETALLECGPPK 224 (292)
Q Consensus 205 -----------------------------------------------------~-------~~~~~~~g~~~~l~C~~~~ 224 (292)
+ ....+.+|+.++|.|.+..
T Consensus 244 pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g 323 (512)
T 1zvo_C 244 QPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVG 323 (512)
T ss_pred CCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEec
Confidence 0 0011336999999999943
Q ss_pred CCCC-CeEEEeEcCeEeccC-CCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 225 GQPE-PTLHWKKNGQFIDLE-SSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 225 ~~p~-~~~~W~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+|+ ..|.|+++|+.+... .........++.+. ....|.|......|.|.|+|.|.|..+..
T Consensus 324 ~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~--~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 324 SDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQS--QHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred eECCCeEEEEEECCEeccCceeccceecCCCCeEE--EEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 3443 499999999886411 11112222333322 23467888888889999999999998754
No 128
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.87 E-value=8.4e-21 Score=143.46 Aligned_cols=135 Identities=21% Similarity=0.355 Sum_probs=93.1
Q ss_pred CCccEEecCCcEEEEEEEee---eCCCeeEEEECCeEE---eecc----------------------CCCcceeEEee--
Q psy15128 43 PQDQKVGLNGIASFQCVAEG---SPLPSVFWTQEGSQV---LMFP----------------------GNAYGHLHVTQ-- 92 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~---~~~~~v~W~~~~~~~---~~~~----------------------~~~~~~~~~~~-- 92 (292)
+..+.+.+|+.++|.|.+.+ .+.+.+.|++++... .... .....+..+..
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 34667889999999999987 678899999986421 0110 00112222221
Q ss_pred ecEEEEccCCCCCCeEEEEEEEeCCcCe-----eEEEEEEEEeecCCCCCeEEe-CCCCceecCCCeEEEEeEeccCCCC
Q psy15128 93 EGTLRIQGVQKEDAGFFVCSALSVAGST-----TVRAFLQVTSVEDTPPPIVQV-GPSNQTLPLHSVAFLPCQAVGSPPP 166 (292)
Q Consensus 93 ~~~l~i~~~~~~d~g~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~p~~ 166 (292)
+..|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|. ....++.+.. .+....+.+|+.+.|.|.+.+.|.|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~--~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT--GHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEET--TTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEe--ccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 3479999999999999999999876643 234444443 2222333333 3444566789999999999998899
Q ss_pred ceEEEeCCeeCCC
Q psy15128 167 HIRWYKNGNSLPP 179 (292)
Q Consensus 167 ~~~W~~~~~~l~~ 179 (292)
.+.|++++..+..
T Consensus 167 ~v~W~k~~~~~~~ 179 (250)
T 2fbo_J 167 NVTWYTGPTFFEN 179 (250)
T ss_dssp EEEEEEEEECSSC
T ss_pred eeEEEeCCCcccc
Confidence 9999999887754
No 129
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.86 E-value=6e-21 Score=140.73 Aligned_cols=138 Identities=20% Similarity=0.301 Sum_probs=88.8
Q ss_pred EeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC--CeEEe--eccC-----CCcceeE---EeeecEEEEccCCCCCCe
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE--GSQVL--MFPG-----NAYGHLH---VTQEGTLRIQGVQKEDAG 107 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--~~~~~--~~~~-----~~~~~~~---~~~~~~l~i~~~~~~d~g 107 (292)
...+ ...+.+|+.++|.|.+.+.+.+.+.|+|. +.... .... ....+.. ......|.|.+++.+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (213)
T 3mj8_L 5 TQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEA 83 (213)
T ss_dssp BCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCE
Confidence 3344 67788999999999999888899999983 21111 1100 0112222 223457999999999999
Q ss_pred EEEEEEEeCCcC---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCC
Q psy15128 108 FFVCSALSVAGS---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPP 179 (292)
Q Consensus 108 ~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~ 179 (292)
.|+|.+.+..+. ......|.|... ...+|.+...+....+.+|+.++|.|.+.+. |+ +.+.|+++|.++..
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 84 DYYCQSWDGTNSAWVFGSGTKVTVLGQ-PNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp EEEEEEEETTTTEEEEBCCEEEEEECS-CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEEEEeccCCcceeEEcCceEEEEeCC-CCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 999999987762 233345555421 1134555554444445578888888887664 33 37888887776643
No 130
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.86 E-value=4.6e-21 Score=141.50 Aligned_cols=163 Identities=13% Similarity=0.100 Sum_probs=114.6
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeec--EEEEccCCCCCCeEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG--TLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~Y~C~ 112 (292)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+..... ......... .|.|.+++.+|+|.|+|.
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~---~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG---RRLKFWNETDPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS---EECC----CCCEEEECSCCGGGCEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc---ccCCCCcceeeEEEEcccccccCEEEEEE
Confidence 4567777666 57889999999999876 6779999998865532110 000112234 899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 113 ALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
+.+..+....+..+.+.+....++|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+|+|..+... .......+.|
T Consensus 83 a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--~~~~~~~~~L 159 (218)
T 1uct_A 83 YRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--HQSGEHPANF 159 (218)
T ss_dssp EEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--EEECSSSEEE
T ss_pred EEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--ccCCCccCEE
Confidence 9987653333333344333334456666555 456889999999997667777899999999877642 2223345689
Q ss_pred EEEeeecCCCCCC
Q psy15128 193 QIDVLRDDFRAEP 205 (292)
Q Consensus 193 ~i~~~~~~d~g~~ 205 (292)
.|.++..+|+|.|
T Consensus 160 ~I~~v~~~D~G~Y 172 (218)
T 1uct_A 160 SLGPVDLNVSGIY 172 (218)
T ss_dssp ECCSCCGGGCEEE
T ss_pred EEccCCcccCEEE
Confidence 9999999999854
No 131
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.86 E-value=2.7e-19 Score=144.03 Aligned_cols=167 Identities=17% Similarity=0.258 Sum_probs=117.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++++|+|.|+|.+.|..|..... +.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 67 i~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~ 145 (389)
T 2jll_A 67 IKDVKLSDSGRYDCEAASRIGGHQKS-MYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKN 145 (389)
T ss_dssp EESCCGGGCEEEEEEEECSSCEEEEE-EEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTT
T ss_pred EcccChhhCEEEEEEEEeCCCCcceE-EEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCccc
Confidence 67899999999999999998887555 99999988887766655578899999999999999999999999998764222
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
..............|.|.++..+|.|.|+|.+.|..|.......+.+... ..+|.... .....+..+.|.|...
T Consensus 146 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~--P~~P~~~~----~~~~~~~~~~l~w~~p 219 (389)
T 2jll_A 146 TTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADV--PSSPYGVK----IIELSQTTAKVSFNKP 219 (389)
T ss_dssp CTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCC--CCCCEEEE----EEEECSSCEEEEEECC
T ss_pred CceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCC--CCCCcceE----EeeccCCEEEEEEeCC
Confidence 11111111122347999999999999999999999888766655554321 11221110 1122457788998742
Q ss_pred cC----CCC--ceEEEeCCe
Q psy15128 162 GS----PPP--HIRWYKNGN 175 (292)
Q Consensus 162 ~~----p~~--~~~W~~~~~ 175 (292)
.. |.. .+.|.+++.
T Consensus 220 ~~~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 220 DSHGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp SCCTTSCEEEEEEEEEETTC
T ss_pred CCCCCcceEEEEEEEEECCC
Confidence 22 222 467877654
No 132
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.86 E-value=1.7e-20 Score=137.15 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=57.6
Q ss_pred CCccEEecCCcEEEEEEEeeeCC-----CeeEEEECCeEEeeccCCCcceeEEe------eecEEEEccCCCCCCeEEEE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPL-----PSVFWTQEGSQVLMFPGNAYGHLHVT------QEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~C 111 (292)
+..+.+.+|+++.|.|.+.+.|. +.+.|++.+....... .+.... ....|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~----~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQS----ERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBC----SSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccC----CceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 34567889999999999988765 7899999443332111 112211 23589999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+.+..+.......|.|.
T Consensus 85 ~~~~~~~~~~~~~~l~V~ 102 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVK 102 (202)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcceEEEEEEec
Confidence 999877655555555443
No 133
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.86 E-value=1.9e-21 Score=148.30 Aligned_cols=151 Identities=26% Similarity=0.333 Sum_probs=111.0
Q ss_pred CCcCCCee--EEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccC
Q psy15128 5 VKKSDEGK--YQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPG 82 (292)
Q Consensus 5 v~~~D~G~--Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~ 82 (292)
++.+|+|. |+|.+.|..+..... +.|.|...|.....+....+.+|+.+.|.|.+. |.+.+.| ++..+.
T Consensus 66 ~~~~d~g~g~Y~C~a~n~~~~~~~~-~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~---- 136 (265)
T 2oz4_A 66 VTAEDEGTQRLTCAVILGNQSQETL-QTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQ---- 136 (265)
T ss_dssp ECGGGCEEEEEEEEEEETTEEEEEE-EEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSS----
T ss_pred cccccCCcceEEEEEecCCCCcEEE-EEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE--CCEEcc----
Confidence 36788885 999999988776655 889997644333334566788999999999997 8889999 665441
Q ss_pred CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCC-cCee---EEEEEEEEeecCCCCCeEEe--CCCCceecCCCeEEE
Q psy15128 83 NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVA-GSTT---VRAFLQVTSVEDTPPPIVQV--GPSNQTLPLHSVAFL 156 (292)
Q Consensus 83 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~-~~~~---~~~~l~v~~~~~~~~~~~~~--~~~~~~~~~g~~v~l 156 (292)
. ....+.|.|..+..+|.|.|+|.+.|.. |... ....|.|.. +|.+.. .+....+.+|+.+.|
T Consensus 137 -~-----~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~-----~p~~~~~~~p~~~~v~~g~~~~l 205 (265)
T 2oz4_A 137 -P-----LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY-----GPRLDERDCPGNWTWPENSQQTP 205 (265)
T ss_dssp -C-----CSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEE-----EEECCGGGSCSEEEEETTCEECC
T ss_pred -C-----CCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEe-----CCccccccCCCccEEcCCCeEEE
Confidence 0 0123468899999999999999998544 5543 445555543 222222 234556889999999
Q ss_pred EeEeccCCCCceEEEeCCe
Q psy15128 157 PCQAVGSPPPHIRWYKNGN 175 (292)
Q Consensus 157 ~C~~~~~p~~~~~W~~~~~ 175 (292)
.|.+.+.|.|.+.|++++.
T Consensus 206 ~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 206 MCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp CCCCEEESCCEEEEEETTT
T ss_pred EeECccCCCCeEEEEECCc
Confidence 9999999999999999987
No 134
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=142.41 Aligned_cols=162 Identities=14% Similarity=0.115 Sum_probs=101.2
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+. ..+.+|++++|.|.+.+.|. .+.|+|++..+..... ........+.|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ---NPLEPKNKARFSIPSMTEHHAGRYRCYYY 78 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE---CCCSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc---cccCCccccEEEeccCChhHCeEEEEEEe
Confidence 4566666665 47889999999999987655 9999999875421100 00112235689999999999999999999
Q ss_pred eCCcCee--EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcC----
Q psy15128 115 SVAGSTT--VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSS---- 188 (292)
Q Consensus 115 ~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~---- 188 (292)
|..+... ..+.|.|. ...++|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|++..+...........
T Consensus 79 n~~g~~~~s~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~ 154 (196)
T 2d3v_A 79 SPAGWSEPSDPLELVVT--GFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQF 154 (196)
T ss_dssp ETTEECBCCCCEEEEEE--CSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCE
T ss_pred CCCCcCCcCccEEEEec--CCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCc
Confidence 8765332 23444443 323355555443 34688999999999999887 89999999987753211111111
Q ss_pred CCcEEEEeeecCCCCCC
Q psy15128 189 SGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 189 ~~~l~i~~~~~~d~g~~ 205 (292)
.+.|.|.++..+|+|.|
T Consensus 155 ~~~L~I~~v~~~D~G~Y 171 (196)
T 2d3v_A 155 QALFPVGPVTPSHRWML 171 (196)
T ss_dssp EEEEECCCCBTTBCEEE
T ss_pred eeEEEeeecCcccCeeE
Confidence 25789999998888843
No 135
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.85 E-value=1.7e-21 Score=140.38 Aligned_cols=169 Identities=14% Similarity=0.180 Sum_probs=105.8
Q ss_pred EEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEcc-CCCCCCeEEEEEEEeCCcCeeEEEE
Q psy15128 47 KVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQG-VQKEDAGFFVCSALSVAGSTTVRAF 125 (292)
Q Consensus 47 ~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~Y~C~~~~~~~~~~~~~~ 125 (292)
...+|+.+.|.|.+.+ +. .+.|+|++..+... .+..|.|.+ ++.+|+|.|+|.+.|..+.......
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-----------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 76 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-----------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLK 76 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-----------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEEC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-----------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEE
Confidence 3467999999999977 43 59999999877421 245799999 9999999999999988776443333
Q ss_pred EEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC
Q psy15128 126 LQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 126 l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~ 205 (292)
+.+... .++ ..... . .........+.+.- . ... .. -..
T Consensus 77 ~~v~~~--~~~-------~~~~~---~----~~~~~~~~~~~~~~----~-~~~--------~~-------------~~~ 114 (186)
T 1jbj_A 77 ARVGSA--DDA-------KKDAA---K----KDDAKKDDAKKDGS----Q-TNK--------AK-------------NLV 114 (186)
T ss_dssp CCCCSC--CCC-------CCCCC---C----CCCCSCCSSSTTCC----S-CCC--------CS-------------SCC
T ss_pred EEEecc--ccc-------ccccc---c----ccccccCCcccccc----c-ccc--------cc-------------ccc
Confidence 332210 000 00000 0 00000000000000 0 000 00 000
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ |.|.|.|+|+|+.+..... ....|.|..+..+|+|.|+|.|.|..
T Consensus 115 ~~~~~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~~~--------------~~~~L~i~~v~~~D~G~Y~C~a~N~~ 176 (186)
T 1jbj_A 115 QVDGSRGDGSVLLTCGL----TDKTIKWLKDGSIISPLNA--------------TKNTWNLGNNAKDPRGTYQCQGAKET 176 (186)
T ss_dssp EECCCSSSCEEEEECSS----SCSCEEEEETTEECCCSSC--------------CSSCCEEEETTSCCEEEEEEEESSCE
T ss_pred cceecCCCCeEEEEeeC----CCCeEEEEECCEECcccCC--------------CcceEEECCCCcCcCEEEEEEEEcCc
Confidence 01234589999999986 7889999999998852111 22368889999999999999999999
Q ss_pred ccc
Q psy15128 286 NQQ 288 (292)
Q Consensus 286 g~~ 288 (292)
|+.
T Consensus 177 g~~ 179 (186)
T 1jbj_A 177 SNP 179 (186)
T ss_dssp EEE
T ss_pred CCc
Confidence 965
No 136
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.85 E-value=2.4e-20 Score=136.09 Aligned_cols=118 Identities=16% Similarity=0.240 Sum_probs=74.4
Q ss_pred EecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCccee-EEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 48 VGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHL-HVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 48 ~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
+.+|+.++|.|.+.|.|.+.+.|++..... ..... .......|.|.+++.+|+|.|+|.+.|..+.....+.|
T Consensus 13 ~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~------~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 13 AQIGDSVSLTCSTTGCESPFFSWRTQIDSP------LNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EETTSCEEEEEEEESCSSCEEEEEETTCCC------CSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EcCCCcEEEEEeecCCCCCeEEEECCCCCC------ccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 448999999999999999999999843210 00111 11224479999999999999999999987655555555
Q ss_pred EEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC--CceEEEeCCee
Q psy15128 127 QVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP--PHIRWYKNGNS 176 (292)
Q Consensus 127 ~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~--~~~~W~~~~~~ 176 (292)
.|... ...+.+. +. ..+.+|+.++|.|.+.+. |. +.+.|++++..
T Consensus 87 ~V~~~--p~~~~~~--~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~ 134 (202)
T 1vca_A 87 EIYSF--PKDPEIH--LS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHL 134 (202)
T ss_dssp EEEBC--CSCCEEE--ES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEE
T ss_pred EEEeC--CCCCEeC--Cc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeE
Confidence 55421 1111222 12 345566666666666554 22 24566666543
No 137
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.85 E-value=6.8e-21 Score=137.77 Aligned_cols=140 Identities=19% Similarity=0.355 Sum_probs=108.1
Q ss_pred EEeCCCCceecCCCeEEEEeEeccCCCCceEEEe-CCeeCCCCCccEEEcCCC---cEEEEeeecCCCCC----------
Q psy15128 139 VQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK-NGNSLPPEDTRINVSSSG---SLQIDVLRDDFRAE---------- 204 (292)
Q Consensus 139 ~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~-~~~~l~~~~~~~~~~~~~---~l~i~~~~~~d~g~---------- 204 (292)
+...+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+... .++.....+ .|.|.++..+|+|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST-QRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC-SSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC-ceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 344556677889999999999988866 899999 67776553 444443333 79999999999982
Q ss_pred --------------------CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccccccc
Q psy15128 205 --------------------PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSI 264 (292)
Q Consensus 205 --------------------~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+......++....++ .|
T Consensus 83 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~--------~L 153 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANN--------NL 153 (189)
T ss_dssp CEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTEEECTTS--------CE
T ss_pred CcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCEEEecCC--------cE
Confidence 244567899999999998 7999999999999988864445555544432 68
Q ss_pred ccccccccccceeEEEEeecccccc
Q psy15128 265 FGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 265 ~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
.|..+..+|+|.|+|.|.|..|...
T Consensus 154 ~i~~v~~~d~G~Y~C~a~n~~~~~~ 178 (189)
T 2v44_A 154 QILNINKSDEGIYRCEGRVEARGEI 178 (189)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEE
T ss_pred EEEEcCcccCeEEEEEEEccccCce
Confidence 8999999999999999999997654
No 138
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.85 E-value=5.3e-21 Score=139.96 Aligned_cols=161 Identities=16% Similarity=0.197 Sum_probs=111.3
Q ss_pred ccEEecCCcEEEEEEEee-eCCCeeEEEECCeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 45 DQKVGLNGIASFQCVAEG-SPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
...+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. +..+ ..... ....|.|.+++.+|+|.|+|.+.| +..
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~--~~~~-~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a 85 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFE--GPKY-KMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKA 85 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECS--SSSC-EEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECcc--CCCE-EEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCe
Confidence 567889999999999864 68999999999998742 1111 11111 123699999999999999999998 444
Q ss_pred eEEEEEEEEeec----------------CCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCCceEEEeCCeeCCCCCcc
Q psy15128 121 TVRAFLQVTSVE----------------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPPHIRWYKNGNSLPPEDTR 183 (292)
Q Consensus 121 ~~~~~l~v~~~~----------------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~~W~~~~~~l~~~~~~ 183 (292)
.....+.+.... ...+|.+...+ ...+.+|+.+.|.|.+.+. |.|.+.|+|++.++.... +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~-~ 163 (207)
T 3rbs_A 86 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-K 163 (207)
T ss_dssp EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC-C
T ss_pred EEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC-c
Confidence 433333221000 00134444333 3668899999999999998 899999999999987643 2
Q ss_pred EEEcC-CCcEEEEeeecCCCCCCcceEEeC
Q psy15128 184 INVSS-SGSLQIDVLRDDFRAEPKDTRVAS 212 (292)
Q Consensus 184 ~~~~~-~~~l~i~~~~~~d~g~~~~~~~~~ 212 (292)
+.... ..+|.|.++..+|+|.|.......
T Consensus 164 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 164 HDFKDGICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp CCCSSEEEEEEETTCCGGGCEEEEEEEEET
T ss_pred eEcCCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 22111 236999999999999776554433
No 139
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=7.8e-20 Score=131.58 Aligned_cols=160 Identities=18% Similarity=0.250 Sum_probs=104.5
Q ss_pred cEEecCCcEEEEEEEeeeCCC--eeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 46 QKVGLNGIASFQCVAEGSPLP--SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 46 ~~~~~g~~~~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
..+.+|+.++|.|.+.+.|.+ .+.|++++..+...... .....|.|. +.+|+|.|+|.+.+.. ...
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-------~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~ 75 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-------GQKTEFKVD--SDDQWGEYSCVFLPEP---MGT 75 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-------CSEEEEEEC--GGGCCEEEEEEEESTT---SCE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-------CCcEEEEEe--chhhCeEEEEEEECCc---CcE
Confidence 457789999999999887766 89999999876422111 113356666 6899999999998721 122
Q ss_pred EEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCC
Q psy15128 124 AFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRA 203 (292)
Q Consensus 124 ~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g 203 (292)
..|.|.. +|.+...
T Consensus 76 ~~l~V~~-----~P~~~~~------------------------------------------------------------- 89 (184)
T 3b5h_A 76 ANIQLHG-----PPRVKAV------------------------------------------------------------- 89 (184)
T ss_dssp EEEEECC-----SCCCEES-------------------------------------------------------------
T ss_pred EEEEEec-----CCceeec-------------------------------------------------------------
Confidence 3333310 0000000
Q ss_pred CCcceEEeCCCceEEEeeCCCCCC-CCeEEEeE---cCeE-eccCCCceEEecCCCcccccccccccccccc-cccccee
Q psy15128 204 EPKDTRVASGETALLECGPPKGQP-EPTLHWKK---NGQF-IDLESSKRVSILGDPWFDSRRSRSIFGSVLG-ALSDDQW 277 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~---~g~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~~~g~y 277 (292)
+....+.+|+.+.|.|.+ .+.| .+.+.|++ ++.. +......++.+..++ ....|.|..+. ..|+|.|
T Consensus 90 -~~~~~~~~g~~~~l~C~~-~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~~d~G~Y 162 (184)
T 3b5h_A 90 -KSSEHINEGETAMLVCKS-ESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQ-----GRSELHIENLNMEADPGQY 162 (184)
T ss_dssp -CSEEEECTTSCEEEEEEC-CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEET-----TEEEEEECSCCTTTSSEEE
T ss_pred -CCCcEEcCCCcEEEEEEE-CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecC-----CeeEEEEeeccccccCceE
Confidence 012345678889999987 7777 78899998 4443 322222444443221 12368899999 8999999
Q ss_pred EEEEeeccccccc
Q psy15128 278 KLIAKNIRNQQQH 290 (292)
Q Consensus 278 ~C~a~n~~g~~~~ 290 (292)
+|.|.|..|....
T Consensus 163 ~C~a~N~~g~~~~ 175 (184)
T 3b5h_A 163 RCNGTSSKGSDQA 175 (184)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEeCCCcceE
Confidence 9999999998764
No 140
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=135.48 Aligned_cols=151 Identities=17% Similarity=0.172 Sum_probs=109.6
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|++.. .....+.|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~------------~~~~~~~L~i~~v~~~D~G~Y~C~a~ 72 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS------------RYQDQAVLFIPAMKRSLAGRYRCSYQ 72 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC------------CEESSSEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc------------ccCcccEEEECcCChhhCceEEEEEE
Confidence 45666666654 7899999999999877 7789999998764 12345689999999999999999999
Q ss_pred eCCcCee--EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 115 SVAGSTT--VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 115 ~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
|..+... ....|.| ....++|.+...+ ...+.+|+.++|.|.+.+. ++.+.|+|++..+..... .....+.|
T Consensus 73 n~~g~~~~s~~~~l~V--~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~--~~~~~~~L 146 (184)
T 2gi7_A 73 NGSLWSLPSDQLELVA--TGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNP--ERWYRASF 146 (184)
T ss_dssp ETTEEBCCCCCEEEEE--ESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCC--CEEEEESS
T ss_pred cCCCccCCCCCEEEEe--cCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceec--CCCceEEE
Confidence 8765322 2344444 3333455565555 4457799999999998665 468999999988765221 12234578
Q ss_pred EEEeeecCCCCCC
Q psy15128 193 QIDVLRDDFRAEP 205 (292)
Q Consensus 193 ~i~~~~~~d~g~~ 205 (292)
.|.++..+|+|.|
T Consensus 147 ~i~~v~~~D~G~Y 159 (184)
T 2gi7_A 147 PIITVTAAHSGTY 159 (184)
T ss_dssp SEEEETTCCSEEE
T ss_pred EEccCCccCCeEE
Confidence 8999998888843
No 141
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=2.5e-20 Score=134.61 Aligned_cols=159 Identities=15% Similarity=0.066 Sum_probs=110.4
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK---PPERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS---SCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc---cCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 4666666655 7899999999999865 45689999999876422111 01122356899999999999999999987
Q ss_pred CCcCe--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEE
Q psy15128 116 VAGST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQ 193 (292)
Q Consensus 116 ~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~ 193 (292)
..+.. .....|.|. ...++|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|+|..+.. ........+.|.
T Consensus 79 ~~~~~~~s~~~~l~V~--~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~--~~~~~~~~~~L~ 152 (188)
T 1oll_A 79 GELWSEPSNLLDLVVT--EMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV--QRGYGKVQAEFP 152 (188)
T ss_dssp TTEECCCCCCEEEEEE--SCSCCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE--EEEECSSEEEEE
T ss_pred CCCCCCCCCceEEEec--ccCCCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCccccc--cccCCCceeEEE
Confidence 64432 223444443 223455665544 3568899999999998654 568999999876643 111223345899
Q ss_pred EEeeecCCCCCC
Q psy15128 194 IDVLRDDFRAEP 205 (292)
Q Consensus 194 i~~~~~~d~g~~ 205 (292)
|.+++.+|+|.|
T Consensus 153 I~~v~~~d~G~Y 164 (188)
T 1oll_A 153 LGPVTTAHRGTY 164 (188)
T ss_dssp EEECCGGGCEEE
T ss_pred ECCCCcCCCcEE
Confidence 999999998844
No 142
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=4.9e-21 Score=145.12 Aligned_cols=177 Identities=14% Similarity=0.142 Sum_probs=100.2
Q ss_pred CCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCC-----CCceEEEeCC-
Q psy15128 101 VQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP-----PPHIRWYKNG- 174 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-----~~~~~W~~~~- 174 (292)
++.+|+|.|+|.|. |.......+.+. .++.+...+....+.+|+.++|.|.+.+.| .+.+.|++++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~-----~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 82 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL-----RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRP 82 (254)
T ss_dssp -----------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECT
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee-----eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCC
Confidence 67899999999998 322222222221 144555556778899999999999998887 3789999843
Q ss_pred -eeC-----------CCCCccEEEcCC---CcEEEEeeecCCCCCC--------------------------cceEEe--
Q psy15128 175 -NSL-----------PPEDTRINVSSS---GSLQIDVLRDDFRAEP--------------------------KDTRVA-- 211 (292)
Q Consensus 175 -~~l-----------~~~~~~~~~~~~---~~l~i~~~~~~d~g~~--------------------------~~~~~~-- 211 (292)
..+ .....++..... .+|.|.++..+|+|.| +...+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~ 162 (254)
T 2c1o_A 83 GQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPP 162 (254)
T ss_dssp TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECC
T ss_pred CCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecC
Confidence 222 111134433322 2799999999999922 222221
Q ss_pred -----CCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCCCceEEe--cCCCccccccccccccccccccccceeEEEEe
Q psy15128 212 -----SGETALLECGPPKG-QPE-PTLHWKKNGQFIDLESSKRVSI--LGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 212 -----~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
.|+.++|.|.+ .+ .|+ +.+.|+++|+++.......... ..++.+. ....|.|..+..+|+|.|+|.|.
T Consensus 163 ~~~~~~g~~v~l~C~~-~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~--~~~~L~i~~~~~~d~G~Y~C~a~ 239 (254)
T 2c1o_A 163 SSEQLTSGGASVVCFL-NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS--MSSTLTLTKDEYERHNSYTCEAT 239 (254)
T ss_dssp CHHHHHTTEEEEEEEE-EEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEE--EEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ChhhccCCcEEEEEEE-ecccCCCcEEEEEECCCcccCcceeccccccCCCCcEE--EEEEEEeccccccCCCeEEEEEE
Confidence 37799999998 55 554 4799999999885320111111 1222221 23468899999999999999999
Q ss_pred eccccc
Q psy15128 283 NIRNQQ 288 (292)
Q Consensus 283 n~~g~~ 288 (292)
|.....
T Consensus 240 n~~~~~ 245 (254)
T 2c1o_A 240 HKTSTS 245 (254)
T ss_dssp CTTCSS
T ss_pred cCCCCC
Confidence 987753
No 143
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.84 E-value=4e-20 Score=136.25 Aligned_cols=128 Identities=14% Similarity=0.100 Sum_probs=85.1
Q ss_pred CCCccEEecC--CcEEEEEEEeeeCCCeeEEEEC--CeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 42 RPQDQKVGLN--GIASFQCVAEGSPLPSVFWTQE--GSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 42 ~~~~~~~~~g--~~~~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.+..+.+.+| +.++|.|.+.+ |.+.+.|++. +.... ..+ ..........|.|.+++.+|+|.|+|.+.+..
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~-~~~---~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~ 87 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFV-PDG---NRISWDSKKGFTIPSYMISYAGMVFCEAKIND 87 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEEC-CCS---SSCEEETTTEEEEEGGGTTTCSEEEEEEC---
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccc-cCC---CcccccCCccEEEccCChhcCceEEEEEEECC
Confidence 3456778899 99999999976 7789999885 33322 111 22333445689999999999999999998843
Q ss_pred cCeeEE-EEEEEEeecCCCCCeEEeCC-CCceecCCCeEEEEeEeccCCC--CceEEEeCCeeC
Q psy15128 118 GSTTVR-AFLQVTSVEDTPPPIVQVGP-SNQTLPLHSVAFLPCQAVGSPP--PHIRWYKNGNSL 177 (292)
Q Consensus 118 ~~~~~~-~~l~v~~~~~~~~~~~~~~~-~~~~~~~g~~v~l~C~~~~~p~--~~~~W~~~~~~l 177 (292)
+..... ..|.+. . ..++.+...+ ....+.+|+.++|.|.+.+.|. +.+.|++++..+
T Consensus 88 ~~~~s~~~~l~v~--~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~ 148 (213)
T 2x1w_L 88 ESYQSIMYIVVVV--G-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148 (213)
T ss_dssp -CEECCCEEEEEC--B-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSC
T ss_pred eeEEEEEEEEEEe--C-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCcc
Confidence 332211 334432 2 2233344433 4447899999999999987643 479999987654
No 144
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.84 E-value=1.2e-19 Score=135.50 Aligned_cols=137 Identities=22% Similarity=0.345 Sum_probs=99.0
Q ss_pred CCCccEEecCCcEEEEEEEeeeCC-CeeEEEECCeEEe---ec----cCC-CcceeE----------EeeecEEEEccCC
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPL-PSVFWTQEGSQVL---MF----PGN-AYGHLH----------VTQEGTLRIQGVQ 102 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~-~~v~W~~~~~~~~---~~----~~~-~~~~~~----------~~~~~~l~i~~~~ 102 (292)
.+....+.+|+.+.|.|.+.+.+. +.+.|++++.... .. ... ...+.. ...++.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 455678899999999999988874 7999998653310 00 000 011122 3344569999999
Q ss_pred CCCCeEEEEEEEeCC-cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeE-EEEeEe-ccCCCCceEEEeCCeeCCC
Q psy15128 103 KEDAGFFVCSALSVA-GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVA-FLPCQA-VGSPPPHIRWYKNGNSLPP 179 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v-~l~C~~-~~~p~~~~~W~~~~~~l~~ 179 (292)
.+|+|.|+|.+.+.. +.......|.|.. ....+.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|++++.++..
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFA--KPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEB--CCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEe--cCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 999999999999876 5555555565543 2334666666666677799988 999999 8899999999999988865
Q ss_pred C
Q psy15128 180 E 180 (292)
Q Consensus 180 ~ 180 (292)
.
T Consensus 164 ~ 164 (231)
T 2pet_A 164 P 164 (231)
T ss_dssp C
T ss_pred c
Confidence 3
No 145
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.84 E-value=2.2e-20 Score=134.52 Aligned_cols=153 Identities=12% Similarity=0.144 Sum_probs=102.1
Q ss_pred ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc---------CCCcceeEEee------ecEEEEccCCCCCCeEE
Q psy15128 45 DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP---------GNAYGHLHVTQ------EGTLRIQGVQKEDAGFF 109 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~---------~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y 109 (292)
.+.+.+|++++|.|.+.+.|.+.+.|++++....... .....+..... ...|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 3567899999999999888888999999886322110 01112222221 33599999999999999
Q ss_pred EEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCC
Q psy15128 110 VCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSS 189 (292)
Q Consensus 110 ~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~ 189 (292)
+|.+.+..+ .+.+.|.. +. .
T Consensus 84 ~C~~~~~~~----~~~l~V~~--------~~------------------------------------~------------ 103 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG--------LT------------------------------------A------------ 103 (184)
T ss_dssp EEEETTEEE----EEEEEEEE--------EE------------------------------------E------------
T ss_pred EEEEEcCCC----cEEEEEEE--------ec------------------------------------C------------
Confidence 999976532 22222210 00 0
Q ss_pred CcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccc
Q psy15128 190 GSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVL 269 (292)
Q Consensus 190 ~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 269 (292)
+....+.+|+.++|.|.+ .+.|.+.+.|+++|..+. . ....|.|..+
T Consensus 104 ---------------~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~~--------~---------~~~~L~i~~v 150 (184)
T 2ny1_B 104 ---------------NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKNI--------Q---------GGKTLSVSQL 150 (184)
T ss_dssp ---------------SSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCEE--------E---------ESSEEEESSC
T ss_pred ---------------CCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCccc--------c---------CceEEEEecC
Confidence 011235667788888887 566777888887765431 1 1125888899
Q ss_pred cccccceeEEEEeeccccccc
Q psy15128 270 GALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 270 ~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..+|+|.|+|.|.|..|..+.
T Consensus 151 ~~~d~G~Y~C~a~n~~~~~~~ 171 (184)
T 2ny1_B 151 ELQDSGTWTCTVLQNQKKVEF 171 (184)
T ss_dssp CGGGCEEEEEEEEETTEEEEE
T ss_pred CcCCCeEEEEEEEECCceEEE
Confidence 999999999999999887654
No 146
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.84 E-value=8.7e-20 Score=135.77 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=51.6
Q ss_pred ccEEecCCcEEEEEEEeeeCCC---eeEEEECCeEEee-----------ccCCC-cceeEE------eeecEEEEccCCC
Q psy15128 45 DQKVGLNGIASFQCVAEGSPLP---SVFWTQEGSQVLM-----------FPGNA-YGHLHV------TQEGTLRIQGVQK 103 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~-----------~~~~~-~~~~~~------~~~~~l~i~~~~~ 103 (292)
++.+.+|++++|.|.+.+.+.+ .|.|+|++..... ..... ..+... ..+..|.|.+++.
T Consensus 13 pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 92 (226)
T 4f80_A 13 PILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTA 92 (226)
T ss_dssp CEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCG
T ss_pred CEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCch
Confidence 4678899999999999765443 6999997642210 00011 111111 1234799999999
Q ss_pred CCCeEEEEEEEeCCcCee
Q psy15128 104 EDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~~~~ 121 (292)
+|+|.|+|.+.|..+...
T Consensus 93 ~D~G~Y~C~a~n~~~~~~ 110 (226)
T 4f80_A 93 SDSGKYLCYFQDGDFYEK 110 (226)
T ss_dssp GGCEEEEEEEEETTEEEE
T ss_pred HHCeeEEEEEECCCcEEE
Confidence 999999999998765443
No 147
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.84 E-value=3.9e-21 Score=139.94 Aligned_cols=119 Identities=17% Similarity=0.213 Sum_probs=91.2
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
.|.+++.+|+|.|+|.+.|..+..... +.|.|..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...
T Consensus 72 ~I~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~ 150 (203)
T 4fa8_A 72 VVTAANISHDGNYLCRMKLGETEVTKQ-EHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAP 150 (203)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-------
T ss_pred EEccCCHHHCeEEEEEEEcCCCcEEEE-EEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCc
Confidence 378999999999999999988887766 8999998888888777788889999999999999999999999876544321
Q ss_pred cCCCcceeEEeeecE---EEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 81 PGNAYGHLHVTQEGT---LRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~---l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
.....+.....++. |.|.++..+|+|.|+|.|.|..|...
T Consensus 151 -~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 151 -TAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp ------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred -ccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence 11222333444444 45568999999999999999988755
No 148
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.84 E-value=4.7e-22 Score=156.06 Aligned_cols=199 Identities=13% Similarity=0.146 Sum_probs=116.5
Q ss_pred cCCcCCCeeEEEEEEecccccccccEEEE---EeCCCcE-EeCCCccEEecCCcEEEEEEEeee-CCC---eeEEEECCe
Q psy15128 4 EVKKSDEGKYQCYVQNMVGERETKPALLT---VHAPPSF-VVRPQDQKVGLNGIASFQCVAEGS-PLP---SVFWTQEGS 75 (292)
Q Consensus 4 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~---v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-~~~---~v~W~~~~~ 75 (292)
++..+|+|.|+|.+.|..+..... +.+. +...|.+ ...+....+.+|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 78 ~~~~~d~g~Y~C~a~n~~~~~~~~-~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g 156 (323)
T 2wqr_A 78 QKHWLSDRTYTCQVTYQGHTFEDS-TKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASG 156 (323)
T ss_dssp HHHHHTTCCEEEEEEETTEEEEEE-ECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTC
T ss_pred HHHcCCCCcEEEEEEeCCCCccee-eecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCC
Confidence 344559999999999876543222 2110 1112333 334444567789999999999886 455 899999753
Q ss_pred EEeeccCCC---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEee-cCCCCCeEEeCCCCceecCC
Q psy15128 76 QVLMFPGNA---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSV-EDTPPPIVQVGPSNQTLPLH 151 (292)
Q Consensus 76 ~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~-~~~~~~~~~~~~~~~~~~~g 151 (292)
......... .....+...+.|.|.++..+|+|.|+|.+.|..+.... .+.+... ....+|.+.+.+.......|
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~~~~~~~P~v~~~~~~~~~~~g 234 (323)
T 2wqr_A 157 KPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKTSGPRAAPEVYAFATPEWPGSR 234 (323)
T ss_dssp CCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCCCSCCBCCEEEEEECCCCTTCT
T ss_pred cccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEccCCCCCCCEEEEeCCChHHhcC
Confidence 322110000 00011224557999999999999999999987643322 2333211 11224444332222222349
Q ss_pred CeEEEEeEeccC-CCC-ceEEEeCCeeCCCCCcc---EEEcCCC------cEEEEeeecCCCCCC
Q psy15128 152 SVAFLPCQAVGS-PPP-HIRWYKNGNSLPPEDTR---INVSSSG------SLQIDVLRDDFRAEP 205 (292)
Q Consensus 152 ~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~~~~---~~~~~~~------~l~i~~~~~~d~g~~ 205 (292)
+.++|.|.+.+. |.+ .+.|+++|.++...... .....++ .|.|..+..+|.|.|
T Consensus 235 ~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y 299 (323)
T 2wqr_A 235 DKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEF 299 (323)
T ss_dssp TEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCE
T ss_pred CcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEE
Confidence 999999999874 433 79999999988653110 1112222 466666666666643
No 149
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.83 E-value=2.5e-19 Score=129.63 Aligned_cols=124 Identities=24% Similarity=0.437 Sum_probs=100.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEE--CCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ--EGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~--~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+. +..... +.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..
T Consensus 60 i~~~~~~d~G~Y~C~~~n~-~~~~~~-~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~ 137 (190)
T 2wv3_A 60 INKPRAEDSGEYHCVYHFV-SAPKAN-ATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEI 137 (190)
T ss_dssp ESSCCGGGCEEEEEEEEET-TEEEEE-EEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEEC
T ss_pred EecCCcccCEEEEEEEEeC-Cccccc-EEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeee
Confidence 6789999999999999998 555555 89999999998888888889999999999999999999999999 6665432
Q ss_pred ccCCCcceeEEee---ecEEEEccCC-CCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 80 FPGNAYGHLHVTQ---EGTLRIQGVQ-KEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 80 ~~~~~~~~~~~~~---~~~l~i~~~~-~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.. ...+..... .+.|.|.+++ .+|.|.|+|.+.|..|.......|.|.
T Consensus 138 ~~--~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 138 SN--SSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CC--TTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ec--CCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 21 122222222 2379999999 699999999999999888777777664
No 150
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.83 E-value=1.1e-20 Score=137.67 Aligned_cols=162 Identities=14% Similarity=0.137 Sum_probs=107.3
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+. ..+.+|+.++|.|.+.+.|. .+.|+|++..+..... ..........|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITR---IPQELVKKGQFPIPSITWEHTGRYRCYYG 78 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHT---SCHHHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccc---ccccCCcccEEEECCCCHHHCeEEEEEEE
Confidence 3566666665 47889999999999987665 7999999876531111 01112235689999999999999999999
Q ss_pred eCC-cC--eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcC---
Q psy15128 115 SVA-GS--TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSS--- 188 (292)
Q Consensus 115 ~~~-~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~--- 188 (292)
|.. +. ....+.|.|. ...+.|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|++..+...........
T Consensus 79 n~~~g~~~~s~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~ 154 (198)
T 1ugn_A 79 SDTAGRSESSDPLELVVT--GAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGS 154 (198)
T ss_dssp ETTTEECCCCCCEEEEEE--CSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------C
T ss_pred CCCCCcccCCccEEEEEc--ccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCc
Confidence 876 42 2333445444 223345555443 3568899999999999888 789999999987754322211111
Q ss_pred -CCcEEEEeeecCCCCCC
Q psy15128 189 -SGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 189 -~~~l~i~~~~~~d~g~~ 205 (292)
.+.|.|.++..+|+|.|
T Consensus 155 ~~~~L~i~~v~~~D~G~Y 172 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWY 172 (198)
T ss_dssp CEEEEEECCCCTTSCEEE
T ss_pred ceeEEEecccCcccCeEE
Confidence 25799999999888843
No 151
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.83 E-value=1e-20 Score=137.65 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=112.3
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+..... ........+.|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ---NPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE---CCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc---ccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 5666666666 7889999999999987 6779999999875531100 000112346899999999999999999999
Q ss_pred CCcCe--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccE---EEcCCC
Q psy15128 116 VAGST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRI---NVSSSG 190 (292)
Q Consensus 116 ~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~---~~~~~~ 190 (292)
..+.. .....|.|. ...+++.+...+.. .+.+|+.++|.|.+.+. ++.+.|+|++..+....... .....+
T Consensus 80 ~~g~~~~s~~~~l~V~--~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMT--GAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQA 155 (196)
T ss_dssp TTEEBCCCCCEEEEEE--CSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEE
T ss_pred CCcccCCCccEEEEec--CCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcce
Confidence 87632 333444443 33345566655543 67899999999999774 56899999998765432111 122345
Q ss_pred cEEEEeeecCCCCCC
Q psy15128 191 SLQIDVLRDDFRAEP 205 (292)
Q Consensus 191 ~l~i~~~~~~d~g~~ 205 (292)
.|.|.++..+|+|.|
T Consensus 156 ~L~i~~v~~~d~G~Y 170 (196)
T 3p2t_A 156 EFPMSPVTSVHGGTY 170 (196)
T ss_dssp EEEECSCCGGGCEEE
T ss_pred EEEeCCCcccCCCeE
Confidence 799999999888844
No 152
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.83 E-value=1.1e-19 Score=141.50 Aligned_cols=126 Identities=22% Similarity=0.289 Sum_probs=96.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEe-----CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVV-----RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-----~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.|..|..... +.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 66 i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~ 144 (305)
T 2nzi_A 66 IASVTDDDATVYQVRATNQGGSVSGT-ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDL 144 (305)
T ss_dssp ESSCCGGGCSEEEEEEEETTEEEEEE-EEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSB
T ss_pred EccCChhhCeEEEEEEEcCCCCccce-EEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEE
Confidence 67899999999999999988776555 8888886655432 23456788899999999999999999999998876
Q ss_pred EeeccCCCcceeEEeeecEEEEcc-CCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 77 VLMFPGNAYGHLHVTQEGTLRIQG-VQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
+. ...............|.|.+ +..+|.|.|+|.+.|..|.......+.+..
T Consensus 145 ~~--~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 197 (305)
T 2nzi_A 145 ID--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (305)
T ss_dssp CC--SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred CC--CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEec
Confidence 53 11111111112345899999 999999999999999998877777777654
No 153
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.83 E-value=5.1e-20 Score=135.72 Aligned_cols=167 Identities=17% Similarity=0.238 Sum_probs=110.4
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eE-Ee-ecc-----CCCcceeEEe---eecEEEEccCCCCC
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQ-VL-MFP-----GNAYGHLHVT---QEGTLRIQGVQKED 105 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~-~~-~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d 105 (292)
.+...+....+.+|++++|.|.+.+.|.+.+.|+|+. .. .. ... .....++... ....|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 4455566788999999999999998888899999842 11 11 110 0011222222 23379999999999
Q ss_pred CeEEEEEEEeCCcC---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCCceEEEeCCeeCCCCC
Q psy15128 106 AGFFVCSALSVAGS---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPPHIRWYKNGNSLPPED 181 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~~W~~~~~~l~~~~ 181 (292)
+|.|+|.+.+..+. ......+.|.. ...+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|+++|..+....
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~ 160 (213)
T 3nl4_L 83 AATYYCQSTYENPTYVSFGGGTEVGVKG--DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGI 160 (213)
T ss_dssp CEEEEEEECCSSTTTCEECCCEEEEEEC--CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSE
T ss_pred CEEEEEecCCCCceeEEeCCCeEEEEeC--CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCe
Confidence 99999999986652 22234455543 234555655555555678999999999988 7889999999999886421
Q ss_pred -ccE--EEcCC------CcEEEEeeecCCCCCCc
Q psy15128 182 -TRI--NVSSS------GSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 182 -~~~--~~~~~------~~l~i~~~~~~d~g~~~ 206 (292)
... ....+ +.|.|..+..+|.|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~ 194 (213)
T 3nl4_L 161 ENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYT 194 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEE
T ss_pred ecccCcccCCCCeEEEEEEEEecHHHcCCCCeEE
Confidence 000 00111 34677777777777443
No 154
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.83 E-value=1.1e-19 Score=134.51 Aligned_cols=139 Identities=17% Similarity=0.291 Sum_probs=80.2
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECC---eE--EeeccC--------CCcceeEEe---eecEEEEcc
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEG---SQ--VLMFPG--------NAYGHLHVT---QEGTLRIQG 100 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~---~~--~~~~~~--------~~~~~~~~~---~~~~l~i~~ 100 (292)
.+...+ ...+.+|++++|.|.+.+. |.+.+.|+|.. .. +..... ....+.... ....|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344444 6788999999999999988 88899999832 11 110000 011222221 234799999
Q ss_pred CCCCCCeEEEEEEEeCCcC-----eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeC
Q psy15128 101 VQKEDAGFFVCSALSVAGS-----TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKN 173 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~ 173 (292)
++.+|+|.|+|.+.+..+. ......|.|.... ..+|.+...+.......|+.++|.|.+.+ .|.+ .+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP-KSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC-CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCC-CCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 9999999999999886551 1222344443211 12333333333333344566666666655 3444 5666666
Q ss_pred CeeCC
Q psy15128 174 GNSLP 178 (292)
Q Consensus 174 ~~~l~ 178 (292)
|.++.
T Consensus 161 g~~l~ 165 (218)
T 3s96_B 161 GTPIT 165 (218)
T ss_dssp TEEC-
T ss_pred CEECc
Confidence 55543
No 155
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.83 E-value=2.9e-19 Score=131.96 Aligned_cols=130 Identities=18% Similarity=0.256 Sum_probs=77.1
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCC---eeEEEECCeEEee-----ccC--------CCcceeEE------eeecEEEEc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLP---SVFWTQEGSQVLM-----FPG--------NAYGHLHV------TQEGTLRIQ 99 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~-----~~~--------~~~~~~~~------~~~~~l~i~ 99 (292)
.+..+.+.+|++++|.|.+.+.|.+ .|.|+|++..... ... ....+... ..+..|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 3456778899999999999887765 4899997643210 000 00011111 123469999
Q ss_pred cCCCCCCeEEEEEEEeCCcCeeEEE-EEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCe
Q psy15128 100 GVQKEDAGFFVCSALSVAGSTTVRA-FLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGN 175 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~~~~~~~-~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~ 175 (292)
+++.+|+|.|.|.+.+..+...... .+.+. .+++..........+..|+.+.+.|.+.+.|+|.+.|++++.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVL----VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVK 157 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEE----BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSC
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEe----eeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCc
Confidence 9999999999999987654433222 22221 112222222333445556666666666666666666666553
No 156
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.83 E-value=9.8e-20 Score=129.32 Aligned_cols=131 Identities=18% Similarity=0.261 Sum_probs=101.8
Q ss_pred CCCeEEeCCCCceecCCCeEEEEeEeccCC-CCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC--------
Q psy15128 135 PPPIVQVGPSNQTLPLHSVAFLPCQAVGSP-PPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP-------- 205 (292)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~-------- 205 (292)
+.|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+... ...+.+.++..+|+|.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~~ 74 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQTS 74 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTSB
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEeCCC
Confidence 456777777777899999999999998886 5689999999988753 23455666666666621
Q ss_pred ------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccc
Q psy15128 206 ------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGS 267 (292)
Q Consensus 206 ------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 267 (292)
+...+.+|+.+.|.|.+..+.|.+.+.|+++|..+.... ....|.|.
T Consensus 75 ~s~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~---------------~~~~L~i~ 139 (170)
T 3ry4_A 75 LSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH---------------LDPTFSIP 139 (170)
T ss_dssp CCCCEEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES---------------SCCEEEES
T ss_pred ceEeEEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC---------------CCCeEEEE
Confidence 344577899999999985567778999999998874211 11258888
Q ss_pred cccccccceeEEEEeeccccc
Q psy15128 268 VLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 268 ~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+..+|+|.|+|.|.|..|..
T Consensus 140 ~v~~~d~G~Y~C~a~n~~g~~ 160 (170)
T 3ry4_A 140 QANHSHSGDYHCTGNIGYTLF 160 (170)
T ss_dssp SCCGGGCEEEEEEEEETTEEE
T ss_pred eccccCCEEEEEEEEeCcCcc
Confidence 999999999999999999974
No 157
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.83 E-value=1.2e-18 Score=130.71 Aligned_cols=135 Identities=15% Similarity=0.283 Sum_probs=84.0
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC--CeEEe--ec--------cCCCcceeEEe----eecEEEEccCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE--GSQVL--MF--------PGNAYGHLHVT----QEGTLRIQGVQ 102 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--~~~~~--~~--------~~~~~~~~~~~----~~~~l~i~~~~ 102 (292)
+...+..+.+.+|++++|.|. .+.|.+.+.|+|+ +.... .. ......+.... ....|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 334566778999999999999 6778889999995 22111 00 00111223222 23479999999
Q ss_pred CCCCeEEEEEEEeCCcCe-----eEEEEEEEEeecCCC-------CCeEEeCCCCceecCCCeEEEEeEeccCCCCceEE
Q psy15128 103 KEDAGFFVCSALSVAGST-----TVRAFLQVTSVEDTP-------PPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRW 170 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~-------~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W 170 (292)
.+|+|.|+|.+.+..+.. .....+.|......+ .+.+...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 999999999999865421 112344443211000 01334445556678888889999888887788888
Q ss_pred EeCC
Q psy15128 171 YKNG 174 (292)
Q Consensus 171 ~~~~ 174 (292)
+|++
T Consensus 162 ~k~~ 165 (238)
T 2p1y_A 162 YQQF 165 (238)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8864
No 158
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.82 E-value=2.4e-19 Score=128.04 Aligned_cols=79 Identities=13% Similarity=0.278 Sum_probs=57.3
Q ss_pred CccEEecCCcEEEEEEEe--eeCCCeeEEEE--CCeEEeeccC-----CCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 44 QDQKVGLNGIASFQCVAE--GSPLPSVFWTQ--EGSQVLMFPG-----NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~--~~~~~~v~W~~--~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
..+...+|++++|.|... +.+.+.|.|++ ++..+..... ....+.....++.|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 345678899999999542 23466899999 8776532211 12344555567799999999999999999999
Q ss_pred eCCcCeeE
Q psy15128 115 SVAGSTTV 122 (292)
Q Consensus 115 ~~~~~~~~ 122 (292)
+..+....
T Consensus 87 n~~g~~~~ 94 (182)
T 1hnf_A 87 DTKGKNVL 94 (182)
T ss_dssp ETTSCEEE
T ss_pred eCCCceeE
Confidence 98776543
No 159
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.82 E-value=3.8e-20 Score=136.34 Aligned_cols=134 Identities=21% Similarity=0.342 Sum_probs=77.0
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eEEe--ecc-----CCCcceeEEe---eecEEEEccCCCCCCeEEE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQVL--MFP-----GNAYGHLHVT---QEGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~~~--~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~ 110 (292)
+....+.+|++++|.|.+.+.|.+.+.|+|+. ..+. ... .....+.... ....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 55678899999999999887777789999853 2221 100 0011233222 2348999999999999999
Q ss_pred EEEEeCCcCe---eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeC
Q psy15128 111 CSALSVAGST---TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSL 177 (292)
Q Consensus 111 C~~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l 177 (292)
|.+.+..... .....+.|... ...+|.+...+....+.+|+.++|.|.+.+. |+ +.+.|+++|.++
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~-~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 156 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRG-PKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATI 156 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECC-CCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEEEcccCcccccCCceEEEEccC-CCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEc
Confidence 9998632211 11123333211 1123344433333333456666666666554 33 456666665544
No 160
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.82 E-value=7.5e-19 Score=133.16 Aligned_cols=134 Identities=18% Similarity=0.306 Sum_probs=87.9
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e---EEeec-cCC----CcceeEE-----eeecEEEEccCCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S---QVLMF-PGN----AYGHLHV-----TQEGTLRIQGVQK 103 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~---~~~~~-~~~----~~~~~~~-----~~~~~l~i~~~~~ 103 (292)
+...+....+.+|++++|.|.+.+.|.+.+.|+|.. . .+... ... ...++.. .....|.|.+++.
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 85 (256)
T 3tf7_C 6 VTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHR 85 (256)
T ss_dssp EECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCG
T ss_pred EEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCc
Confidence 444556778899999999999998888999999832 1 11100 000 0112222 1234799999999
Q ss_pred CCCeEEEEEEEeCCcCe----eEEEEEEEEee---------------cCCCCCeEEeCCCCceecCCCeEEEEeEeccCC
Q psy15128 104 EDAGFFVCSALSVAGST----TVRAFLQVTSV---------------EDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP 164 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~~~----~~~~~l~v~~~---------------~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 164 (292)
+|+|.|+|.+.+..+.. .....|.|... ....++.+...+....+.+|++++|.|.+.+.
T Consensus 86 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~- 164 (256)
T 3tf7_C 86 SDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS- 164 (256)
T ss_dssp GGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-
T ss_pred ccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-
Confidence 99999999998865421 11234555421 02235566666677777899999999998776
Q ss_pred CCceEEEeC
Q psy15128 165 PPHIRWYKN 173 (292)
Q Consensus 165 ~~~~~W~~~ 173 (292)
.+.+.|++.
T Consensus 165 ~~~v~W~k~ 173 (256)
T 3tf7_C 165 HNYMYWYRQ 173 (256)
T ss_dssp CSEEEEEEE
T ss_pred ceEEEEEEE
Confidence 678999975
No 161
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.82 E-value=6.2e-19 Score=130.73 Aligned_cols=174 Identities=15% Similarity=0.243 Sum_probs=99.6
Q ss_pred CCccEEecCCcEEEEEEEeeeCC-----CeeEEEECCeEEeeccCCC----------cceeEEee------ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPL-----PSVFWTQEGSQVLMFPGNA----------YGHLHVTQ------EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~----------~~~~~~~~------~~~l~i~~~ 101 (292)
+..+.+.+|+++.|.|.+.+.|. ..+.|++++..+....... ..+..... +..|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34557889999999999877653 3899999875443222110 12222221 248999999
Q ss_pred CCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCC
Q psy15128 102 QKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPED 181 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~ 181 (292)
+.+|+|.|+|.+.+ .+.....+.|.|.. ....+...
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~--~~~~~~~~----------------------------------------- 123 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNA--PYNKINQR----------------------------------------- 123 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEB--CCCCCEEE-----------------------------------------
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEEC--CCCCCCce-----------------------------------------
Confidence 99999999999998 34333334443321 00000000
Q ss_pred ccEEEcCCCcEEEEeeecCCCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEc-CeEeccCCCceEEecCCCcccccc
Q psy15128 182 TRINVSSSGSLQIDVLRDDFRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKN-GQFIDLESSKRVSILGDPWFDSRR 260 (292)
Q Consensus 182 ~~~~~~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+ ...+..|+.+.|.|.+ .|.|.+.+.|+++ |..+............++.+.
T Consensus 124 ------------~------------~~~~~~g~~v~L~C~~-~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~--- 175 (222)
T 3sbw_C 124 ------------I------------LVVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFN--- 175 (222)
T ss_dssp ------------E------------EEEETTTTEEEEEEEE-EEBSCCEEEEEETTCCEECCEEEEEECC----CEE---
T ss_pred ------------e------------eeeecCCCcEEEEEEe-cCCCCCeEEEEECCCceecCccceEEEcCCCCCEE---
Confidence 0 0022356677777776 5677777777776 554421111111111111111
Q ss_pred ccccccccccccccceeEEEEeeccccccc
Q psy15128 261 SRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 261 ~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
...+..+...|.|.|+|.|.|..|.+..
T Consensus 176 --~~~~l~v~~~d~g~Y~C~a~n~~g~~~~ 203 (222)
T 3sbw_C 176 --VTSTLRINTTTNEIFYCTFRRLDPEENH 203 (222)
T ss_dssp --EEEEEEEECCTTCEEEEEEEETTTTEEE
T ss_pred --EEEEEEEeccCCcEEEEEEEeCccceee
Confidence 1112234578999999999999998764
No 162
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.82 E-value=5.1e-20 Score=135.54 Aligned_cols=131 Identities=15% Similarity=0.236 Sum_probs=83.3
Q ss_pred ccEEecCCcEEEEEEEeeeCCCeeEEEEC--CeEE--eeccC-----CCcceeE---EeeecEEEEccCCCCCCeEEEEE
Q psy15128 45 DQKVGLNGIASFQCVAEGSPLPSVFWTQE--GSQV--LMFPG-----NAYGHLH---VTQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--~~~~--~~~~~-----~~~~~~~---~~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
...+.+|++++|.|.+. +.+.+.|+|+ +... ..... ....+.. ......|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 66788999999999998 7889999994 2211 11100 0112222 22234799999999999999999
Q ss_pred EEeCCcC--eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC--CCCceEEEeCCeeCC
Q psy15128 113 ALSVAGS--TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS--PPPHIRWYKNGNSLP 178 (292)
Q Consensus 113 ~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~~~l~ 178 (292)
+.+..+. ......|.|... ...+|.+...+....+..|+.++|.|.+.+. |.+.+.|+++|.++.
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~-~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 155 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQ-PKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK 155 (211)
T ss_dssp EEETTTEEEECCCEEEEECCS-CCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EecCCCceeECCCceEEEeCC-CCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecC
Confidence 9987652 233344544421 1134455544444444568888888887664 245678888776654
No 163
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.82 E-value=3.3e-19 Score=129.08 Aligned_cols=124 Identities=23% Similarity=0.362 Sum_probs=100.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 66 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 145 (191)
T 1epf_A 66 IYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK 145 (191)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGC
T ss_pred EccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccC
Confidence 67899999999999999987544444488999999998888888889999999999999999999999999998764222
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
. .+.....++.|.|.+++.+|+|.|+|.+.|..+.......+.+
T Consensus 146 ~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 146 D---VRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp C---TTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred C---ceEEEecCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 1 2333444568999999999999999999998766555555544
No 164
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.81 E-value=2.1e-19 Score=137.16 Aligned_cols=129 Identities=17% Similarity=0.344 Sum_probs=79.5
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEe---eeCCCeeEEEECCeEEe------ec-------cCCCcceeEEe-----eecE
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAE---GSPLPSVFWTQEGSQVL------MF-------PGNAYGHLHVT-----QEGT 95 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~---~~~~~~v~W~~~~~~~~------~~-------~~~~~~~~~~~-----~~~~ 95 (292)
+.+...+....+.+|+.++|.|.+. +.+.+.+.|++++.... .. ......+..+. .+..
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3445566677899999999999987 56677899999653210 00 00001222221 2267
Q ss_pred EEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe---ccCCCCceEEEe
Q psy15128 96 LRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA---VGSPPPHIRWYK 172 (292)
Q Consensus 96 l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~---~~~p~~~~~W~~ 172 (292)
|.|.+++.+|+|.|+|.+.+..+.......+.+.+.. ..+....+.+|+.++|.|.+ .+.|.+.+.|++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~--------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP--------EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC--------CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec--------cCCCccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 9999999999999999999875554444444443321 12233456677777777777 455667777776
Q ss_pred C
Q psy15128 173 N 173 (292)
Q Consensus 173 ~ 173 (292)
+
T Consensus 158 ~ 158 (268)
T 3mj6_A 158 S 158 (268)
T ss_dssp E
T ss_pred c
Confidence 4
No 165
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.81 E-value=4.3e-19 Score=129.51 Aligned_cols=163 Identities=12% Similarity=0.117 Sum_probs=107.1
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~ 113 (292)
..+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+...... ...........|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLI-GEHHDGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEE-CEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceee-eecCCCCceEEEEeccCCcccCeEEEEeE
Confidence 34566666664 67889999999999864 67799999998654211000 00001123568999999999999999999
Q ss_pred EeCCc-----CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcC
Q psy15128 114 LSVAG-----STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSS 188 (292)
Q Consensus 114 ~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~ 188 (292)
.+... .......|.|. ...++|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+...........
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~--~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~ 158 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVII--GLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVN 158 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEE--CSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEET
T ss_pred ecCCCCccccCCCCCEEEEee--ccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccC
Confidence 86421 12233445444 2334566665554 46889999999999876 5678999999987754211111111
Q ss_pred ---CCcEEEEeeecCCCCCC
Q psy15128 189 ---SGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 189 ---~~~l~i~~~~~~d~g~~ 205 (292)
.+.|.|.++. |+|.|
T Consensus 159 ~~~~~~L~i~~v~--d~G~Y 176 (201)
T 1nkr_A 159 GTFQADFPLGPAT--HGGTY 176 (201)
T ss_dssp TEEEEEEEEEECC--SCEEE
T ss_pred CceEEEEEeCCcC--CCeeE
Confidence 3478888887 77743
No 166
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.81 E-value=5.7e-19 Score=128.09 Aligned_cols=121 Identities=31% Similarity=0.424 Sum_probs=97.3
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 67 i~~~~~~d~G~Y~C~~~n~~~~~~~~-~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~ 145 (194)
T 2a38_A 67 IPAVTKANSGRYSLKATNGSGQATST-AELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQ 145 (194)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECC
T ss_pred ECCCCcccCEEEEEEEEcCCceEeEE-EEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECC
Confidence 67899999999999999988776655 788887 45667777777889999999999999999999999999998763
Q ss_pred eccCCCcceeEEeee---cEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 79 MFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
. . .+.....+ ..|.|.++..+|.|.|+|.+.|..|.....+.|.|
T Consensus 146 ~--~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 146 S--S---LDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp C--S---SSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred C--C---CcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 1 1 12222222 27999999999999999999999887776666654
No 167
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.80 E-value=1.3e-18 Score=128.02 Aligned_cols=124 Identities=26% Similarity=0.487 Sum_probs=99.4
Q ss_pred cccCCc-CCCeeEEEEEEecccccccccEEEEEeCC-------CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC
Q psy15128 2 ITEVKK-SDEGKYQCYVQNMVGERETKPALLTVHAP-------PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE 73 (292)
Q Consensus 2 i~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~ 73 (292)
|.+++. +|+|.|+|.+.+..+......+.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++
T Consensus 68 i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~ 147 (212)
T 2yd1_A 68 IEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKN 147 (212)
T ss_dssp ESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEET
T ss_pred EEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEEC
Confidence 678888 99999999999988774444488888765 6677777778888999999999999999999999999
Q ss_pred CeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE-EEEEEEe
Q psy15128 74 GSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVTS 130 (292)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~-~~l~v~~ 130 (292)
+..+... ..+. ...++.|.|.+++.+|+|.|+|.+.|..|..... +.|.|..
T Consensus 148 ~~~~~~~----~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 148 QTKVDMS----NPRY-SLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp TEECCTT----STTE-EEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CeEcccC----CCeE-EccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 9876321 1122 2335699999999999999999999998876544 6677664
No 168
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=126.18 Aligned_cols=118 Identities=30% Similarity=0.538 Sum_probs=97.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCC-eeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLP-SVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...
T Consensus 72 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 151 (195)
T 2c5d_C 72 ITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATA 151 (195)
T ss_dssp ESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSS
T ss_pred EEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCC
Confidence 67899999999999999987776666699999999999888888889999999999999999999 99999998865321
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQV 128 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v 128 (292)
.. . ...+.|.|.+++ |+|.|+|.+.|..|... ..+.|.|
T Consensus 152 ~~--~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 152 PG--H-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TT--S-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CC--c-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 11 0 345689999887 78999999999888664 4566655
No 169
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.80 E-value=6.7e-19 Score=128.08 Aligned_cols=125 Identities=22% Similarity=0.290 Sum_probs=96.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeC-----CCccEEecCCcEEEEEEEeeeCCCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVR-----PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 66 i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~ 144 (197)
T 2j8h_A 66 IASVTDDDATVYQVRATNQGGSVSGT-ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDL 144 (197)
T ss_dssp ECSCCGGGCSEEEEEEEETTEEEEEE-EEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCE
T ss_pred ECcCCHHhCEEEEEEEEECCCceeEE-EEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEE
Confidence 67899999999999999987776555 88888876654322 2345678899999999999999999999999987
Q ss_pred EeeccCCCcceeEEeeecEEEEcc-CCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 77 VLMFPGNAYGHLHVTQEGTLRIQG-VQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
+. ...............|.|.+ +..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 145 ~~--~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 145 ID--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EC--SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ee--cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 64 11121111122346899999 99999999999999998887777766654
No 170
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=1.1e-18 Score=130.61 Aligned_cols=163 Identities=15% Similarity=0.063 Sum_probs=112.7
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+.. .+.+|++++|.|.+.+ +...+.|+|++..+....... ........|.|.+++.+|+|.|+|.+.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~---~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 80 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP---PERINKVKFYIPDMNSRMAGQYSCIYR 80 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS---CTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccc---cCCcceeEEEecCCCcccCeEEEEEEe
Confidence 35666666665 7899999999999864 456899999998764221110 111235589999999999999999998
Q ss_pred eCCcCe--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcE
Q psy15128 115 SVAGST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSL 192 (292)
Q Consensus 115 ~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l 192 (292)
+..+.. +....|.|. ...+.|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|+|..+.. ........+.|
T Consensus 81 ~~~~~s~~S~~~~L~V~--~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~--~~~~~~~~~~l 154 (242)
T 1p6f_A 81 VGELWSEPSNLLDLVVT--EMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV--QRGYGKVQAEF 154 (242)
T ss_dssp ETTEECCCCCCEEEEEE--CCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE--EEEECSSEEEE
T ss_pred cCCccccCCcceEEEee--cccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc--cccCCCceEEE
Confidence 754332 223444443 333456665554 3468899999999998754 568999999876643 11122234589
Q ss_pred EEEeeecCCCCCCcce
Q psy15128 193 QIDVLRDDFRAEPKDT 208 (292)
Q Consensus 193 ~i~~~~~~d~g~~~~~ 208 (292)
.|.+++.+|+|.|...
T Consensus 155 ~I~~v~~~d~G~Y~C~ 170 (242)
T 1p6f_A 155 PLGPVTTAHRGTYRCF 170 (242)
T ss_dssp EEEECCGGGCEEEEEE
T ss_pred EeCCCccccCEEEEEE
Confidence 9999999999977543
No 171
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.80 E-value=4.3e-18 Score=129.24 Aligned_cols=138 Identities=16% Similarity=0.209 Sum_probs=79.9
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC---Ce-E-Eeecc---------CCCcceeE-----EeeecEEE
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE---GS-Q-VLMFP---------GNAYGHLH-----VTQEGTLR 97 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~---~~-~-~~~~~---------~~~~~~~~-----~~~~~~l~ 97 (292)
|.+...+....+.+|++++|.|.+.+.+.+.+.|+|. .. . +.... .....+.. ......|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 4455556678899999999999998888889999983 11 1 11111 00000111 11234799
Q ss_pred EccCCCCCCeEEEEEEEeCCcC---eeEEEEEEEEeecCCC------------CCeEEeCCCCceecCCCeEEEEeEecc
Q psy15128 98 IQGVQKEDAGFFVCSALSVAGS---TTVRAFLQVTSVEDTP------------PPIVQVGPSNQTLPLHSVAFLPCQAVG 162 (292)
Q Consensus 98 i~~~~~~d~g~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~------------~~~~~~~~~~~~~~~g~~v~l~C~~~~ 162 (292)
|.+++.+|+|.|.|.+.+..+. ......|.|......+ .+.+...+....+.+|++++|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 9999999999999999986542 2223445554321111 244555566677888999999998866
Q ss_pred C-CCCceEEEeCC
Q psy15128 163 S-PPPHIRWYKNG 174 (292)
Q Consensus 163 ~-p~~~~~W~~~~ 174 (292)
. +.+.+.|++++
T Consensus 163 ~~~~~~v~W~k~~ 175 (259)
T 3omz_A 163 SWWSYYIFWYKRL 175 (259)
T ss_dssp CCSSCEEEEEEEC
T ss_pred ccCCceEEEeeeC
Confidence 4 67789998853
No 172
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.79 E-value=6.5e-19 Score=129.79 Aligned_cols=163 Identities=18% Similarity=0.220 Sum_probs=106.0
Q ss_pred EeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCe--EE--ee-----ccCCCcceeEEe---eecEEEEccCCCCCCe
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGS--QV--LM-----FPGNAYGHLHVT---QEGTLRIQGVQKEDAG 107 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~--~~--~~-----~~~~~~~~~~~~---~~~~l~i~~~~~~d~g 107 (292)
...+....+.+|++++|.|.+.+.|.+.+.|+|++. .. .. .......+.... ....|.|.+++.+|+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3d9a_L 5 TQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (213)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCE
Confidence 344567788999999999999988888999998532 11 00 001111233332 2338999999999999
Q ss_pred EEEEEEEeCCcCeeE-EEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCeeCCCC-Ccc
Q psy15128 108 FFVCSALSVAGSTTV-RAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNSLPPE-DTR 183 (292)
Q Consensus 108 ~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~l~~~-~~~ 183 (292)
.|+|.+.+..+.... ...+.|.. ...+|.+...+.......|+.++|.|.+.+ .|.+ .+.|+++|.++... ...
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 162 (213)
T 3d9a_L 85 MYFCQQSNSWPYTFGGGTKLEIKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 162 (213)
T ss_dssp EEEEEECSSSSCEECCCEEEEECC--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEE
T ss_pred EEEEeeecCCcceeCCCEEEEEec--CCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeec
Confidence 999999987654221 23454432 222455555444444557999999999987 5555 79999999988764 111
Q ss_pred E--EEcCC------CcEEEEeeecCCCCC
Q psy15128 184 I--NVSSS------GSLQIDVLRDDFRAE 204 (292)
Q Consensus 184 ~--~~~~~------~~l~i~~~~~~d~g~ 204 (292)
. ....+ ..|.|.++..+|+|.
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 191 (213)
T 3d9a_L 163 WTDQDSKDSTYSMSSTLTLTKDEYERHNS 191 (213)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHHCCE
T ss_pred CCCccCCCCCEEEEEEEEEeccccCCCCE
Confidence 1 11112 267888888878773
No 173
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.79 E-value=1.3e-18 Score=131.33 Aligned_cols=131 Identities=21% Similarity=0.296 Sum_probs=85.1
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCe-----eEEEECCeE----Eee--ccCCC------ccee----EEeeecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPS-----VFWTQEGSQ----VLM--FPGNA------YGHL----HVTQEGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~-----v~W~~~~~~----~~~--~~~~~------~~~~----~~~~~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+.|.+. +.|++++.. +.. ..+.. ..+. ....+..|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3455788999999999998877665 999996321 100 00000 0000 0012335999999
Q ss_pred CCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCeeCCC
Q psy15128 102 QKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNSLPP 179 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~l~~ 179 (292)
+.+|+|.|+|.+.+..+.......|.|.. +|.+...+. .....|+.+.|.|.+.+ .|.+ .+.|++++.++..
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~-----~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~ 163 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVA-----SPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPH 163 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEB-----CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCS
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEec-----CCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCC
Confidence 99999999999998776666666666653 444554444 33456778889999988 6888 8999999987654
No 174
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=131.26 Aligned_cols=144 Identities=11% Similarity=0.096 Sum_probs=90.8
Q ss_pred CCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccE-EEcCCCcEEEEeeecCCCCCC--------
Q psy15128 135 PPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRI-NVSSSGSLQIDVLRDDFRAEP-------- 205 (292)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~-~~~~~~~l~i~~~~~~d~g~~-------- 205 (292)
++|.+...|.. .+.+|+.++|.|.+.+.|. .+.|+|++..+....... .....+.|.|.++..+|+|.|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 45666666653 7889999999999987755 899999998775321100 112234688888888888711
Q ss_pred -------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccc
Q psy15128 206 -------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRR 260 (292)
Q Consensus 206 -------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+...+.+|+.++|.|.+ .+.| +.+.|+|+|..+..... .......+ ..
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~~~~~-~~~~~~~~----~~ 154 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKLSWTL-DSQLTPSG----QF 154 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEE-SSCC-SEEEEEEC---CCEEEE-ECEECTTS----CE
T ss_pred CcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEc-CCCC-CEEEEEccCCccccccc-ccccccCC----Cc
Confidence 12356789999999998 7777 89999999987631110 10111111 11
Q ss_pred ccccccccccccccceeEEEEeecccc
Q psy15128 261 SRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 261 ~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
...|.|..+..+|+|.|+|.|.|..+.
T Consensus 155 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 155 QALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred eeEEEeeecCcccCeeEEEEEEccCCC
Confidence 236889999999999999999998763
No 175
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.79 E-value=5.6e-18 Score=128.40 Aligned_cols=138 Identities=13% Similarity=0.241 Sum_probs=88.5
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--e---EEeec---------cCCCcceeEEee-----ec
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S---QVLMF---------PGNAYGHLHVTQ-----EG 94 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~---~~~~~---------~~~~~~~~~~~~-----~~ 94 (292)
++.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|.. . .+... ......+..... ..
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 4555667778889999999999999873 66789999742 1 11100 111123333332 23
Q ss_pred EEEEccCCCCCCeEEEEEEEeC------------CcCeeEEEEEEEEeecCC----------CCCeEEeCCCCceecCCC
Q psy15128 95 TLRIQGVQKEDAGFFVCSALSV------------AGSTTVRAFLQVTSVEDT----------PPPIVQVGPSNQTLPLHS 152 (292)
Q Consensus 95 ~l~i~~~~~~d~g~Y~C~~~~~------------~~~~~~~~~l~v~~~~~~----------~~~~~~~~~~~~~~~~g~ 152 (292)
.|.|.+++.+|+|.|.|.+.+. .........|.|...... .++.+...+....+.+|+
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 165 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGE 165 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTS
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCC
Confidence 6999999999999999999875 111222334444321110 033455556667788888
Q ss_pred eEEEEeEeccCCC-CceEEEeC
Q psy15128 153 VAFLPCQAVGSPP-PHIRWYKN 173 (292)
Q Consensus 153 ~v~l~C~~~~~p~-~~~~W~~~ 173 (292)
+++|.|.+.+.+. +.+.|++.
T Consensus 166 ~v~L~C~~~~~~~~~~v~W~k~ 187 (256)
T 3juy_B 166 RATFSCRSSHSIRSRRVAWYQH 187 (256)
T ss_dssp CEEEEEEESSCCTTCCEEEEEE
T ss_pred CEEEEEEECCCcCCeeEEEEEE
Confidence 8999998877765 78888874
No 176
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.79 E-value=8.3e-20 Score=132.80 Aligned_cols=142 Identities=14% Similarity=0.174 Sum_probs=99.9
Q ss_pred CCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEE-EcCCCcEEEEeeecCCCCCC--------
Q psy15128 135 PPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRIN-VSSSGSLQIDVLRDDFRAEP-------- 205 (292)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~-~~~~~~l~i~~~~~~d~g~~-------- 205 (292)
++|.+...|.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+........ ....+.|.|.++..+|+|.|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 45666666666 7889999999999987 6789999999987754211100 12235788888888888822
Q ss_pred -------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccc
Q psy15128 206 -------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRR 260 (292)
Q Consensus 206 -------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+...+.+|+.++|.|.+ .+ +++.+.|+++|..+.......... ....
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~------~~~~ 153 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQS-RS-PMDTFLLCKERAAHPLLCLRSEHG------AQQH 153 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEE-EE-EEEEEEEEETTCCCGGGSEEEEEE------EEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEec-CC-CCCEEEEEeCCCcccceeeccccc------ccCc
Confidence 11246789999999998 55 456899999998764221111100 0012
Q ss_pred ccccccccccccccceeEEEEeeccc
Q psy15128 261 SRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 261 ~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
...|.|..+..+|+|.|+|.|.|..+
T Consensus 154 ~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 154 QAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 23688999999999999999999987
No 177
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=4.9e-18 Score=128.74 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=52.7
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeecc--------CCCcceeEEee-----ecEEEEccCC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMFP--------GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~--------~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
+....+.+|++++|.|.+.+.| .+.+.|+|+. .. +.... .....++.... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3455788999999999998874 6789999852 11 11000 01123333332 3489999999
Q ss_pred CCCCeEEEEEEEeCCc
Q psy15128 103 KEDAGFFVCSALSVAG 118 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~ 118 (292)
.+|+|.|+|.+.+..+
T Consensus 87 ~~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGG 102 (257)
T ss_dssp TTCCEEEEEEEESSSS
T ss_pred cccCEEEEEEEccccc
Confidence 9999999999998753
No 178
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.79 E-value=2.5e-18 Score=126.52 Aligned_cols=123 Identities=29% Similarity=0.456 Sum_probs=95.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC-CCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA-PPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 76 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~ 155 (212)
T 2v9r_A 76 HGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDD 155 (212)
T ss_dssp CCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECT
T ss_pred ecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCC
Confidence 5678999999999999998877655557888875 4445556667788999999999998 8889999999999987742
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE-EEEEEE
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR-AFLQVT 129 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~-~~l~v~ 129 (292)
. .. .....++.|.|.+++.+|.|.|+|.+.|..|..... +.|.|.
T Consensus 156 ~----~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 156 K----DE-RITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201 (212)
T ss_dssp T----ST-TEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred C----cc-eEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE
Confidence 1 11 122346689999999999999999999988765433 566665
No 179
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.79 E-value=9.7e-18 Score=127.08 Aligned_cols=131 Identities=14% Similarity=0.224 Sum_probs=82.5
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEeec------------cCCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVLMF------------PGNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~~~------------~~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ...... ......++.... ...|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3445688999999999998755 6789999842 111100 001112333332 225999999
Q ss_pred CCCCCeEEEEEEEeCC----cCeeEEEEEEEEeec-----------CCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC
Q psy15128 102 QKEDAGFFVCSALSVA----GSTTVRAFLQVTSVE-----------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP 166 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~----~~~~~~~~l~v~~~~-----------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 166 (292)
+.+|+|.|+|.+.+.. +.......|.|.... ...++.+...+....+.+|++++|.|.+.+.+.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc
Confidence 9999999999998762 212223445443210 0013445555555677788888888888777777
Q ss_pred ceEEEeC
Q psy15128 167 HIRWYKN 173 (292)
Q Consensus 167 ~~~W~~~ 173 (292)
.+.|+|+
T Consensus 169 ~v~W~k~ 175 (256)
T 3umt_A 169 NLNWLQQ 175 (256)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 8888874
No 180
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=1.2e-17 Score=128.32 Aligned_cols=132 Identities=15% Similarity=0.280 Sum_probs=81.3
Q ss_pred EeCCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe--ec-c---------CCCcceeEEee-----ecEEEE
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL--MF-P---------GNAYGHLHVTQ-----EGTLRI 98 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~--~~-~---------~~~~~~~~~~~-----~~~l~i 98 (292)
...|....+.+|++++|.|.+.+.+ .+.+.|+|++ .... .. . .....+..... ...|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 4456677899999999999998764 5789999964 1111 00 0 01123333332 257999
Q ss_pred ccCCCCCCeEEEEEEEeCCc---Cee--EEEEEEEEeecC----------CCCCeEEeCCCCceecCCCeEEEEeEeccC
Q psy15128 99 QGVQKEDAGFFVCSALSVAG---STT--VRAFLQVTSVED----------TPPPIVQVGPSNQTLPLHSVAFLPCQAVGS 163 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~~~---~~~--~~~~l~v~~~~~----------~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 163 (292)
.+++.+|+|.|.|.+.+..+ ... ....|.|..... ..++.+...+....+.+|++++|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 99999999999999998765 111 223455543110 012233333444556677777777777666
Q ss_pred CCCceEEEe
Q psy15128 164 PPPHIRWYK 172 (292)
Q Consensus 164 p~~~~~W~~ 172 (292)
+ +.+.|+|
T Consensus 190 ~-~~v~W~k 197 (282)
T 1qok_A 190 V-SYMHWFQ 197 (282)
T ss_dssp C-SCCEEEE
T ss_pred C-ceEEEEE
Confidence 6 6777776
No 181
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.79 E-value=4.4e-18 Score=128.72 Aligned_cols=134 Identities=14% Similarity=0.255 Sum_probs=86.6
Q ss_pred eCCCccEEecCCcEEEEEEEeeeC--CCeeEEEEC--CeEEeec------------cCCCcceeEEeee-----cEEEEc
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQE--GSQVLMF------------PGNAYGHLHVTQE-----GTLRIQ 99 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~--~~~~~~~------------~~~~~~~~~~~~~-----~~l~i~ 99 (292)
..+....+.+|++++|.|.+.+.+ .+.+.|+|. +...... ......+.....+ ..|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 445567788999999999998743 678999983 2111100 0011123333322 249999
Q ss_pred cCCCCCCeEEEEEEEeCCcCe-eEEEEEEEEee----------cCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC--
Q psy15128 100 GVQKEDAGFFVCSALSVAGST-TVRAFLQVTSV----------EDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP-- 166 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~----------~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-- 166 (292)
+++.+|+|.|+|.+.+..+.. .....+.|... ...+++.+...+....+.+|++++|.|.+.+.+.+
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 165 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYG 165 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETT
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCC
Confidence 999999999999998854432 22344554421 11224455555666778899999999999887766
Q ss_pred --ceEEEeCC
Q psy15128 167 --HIRWYKNG 174 (292)
Q Consensus 167 --~~~W~~~~ 174 (292)
.+.|++++
T Consensus 166 ~~~v~W~r~~ 175 (253)
T 3uzq_A 166 NSFMHWYQQK 175 (253)
T ss_dssp EECEEEEEEC
T ss_pred CcEEEEEEEC
Confidence 89999853
No 182
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.79 E-value=4.9e-17 Score=123.26 Aligned_cols=133 Identities=16% Similarity=0.249 Sum_probs=85.9
Q ss_pred eCCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--eEEeec-----------cCCCcceeEEee-----ecEEEEcc
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--SQVLMF-----------PGNAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~~~~~~-----------~~~~~~~~~~~~-----~~~l~i~~ 100 (292)
..+....+.+|++++|.|.+.+. +.+.+.|+|.. ...... ......+..... ...|.|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 34456678999999999999884 46789999832 111100 011123333332 22799999
Q ss_pred CCCCCCeEEEEEEEeCCcC----eeEEEEEEEEeec---------CCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC-
Q psy15128 101 VQKEDAGFFVCSALSVAGS----TTVRAFLQVTSVE---------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP- 166 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~----~~~~~~l~v~~~~---------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~- 166 (292)
++.+|+|.|+|.+.+..+. ......|.|.... ..+.+.+...+....+.+|++++|.|.+.+.+.+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 172 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS 172 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce
Confidence 9999999999999986211 1222344444210 0123455555666778889999999999887766
Q ss_pred ceEEEeC
Q psy15128 167 HIRWYKN 173 (292)
Q Consensus 167 ~~~W~~~ 173 (292)
.+.|+++
T Consensus 173 ~v~W~k~ 179 (257)
T 3gkz_A 173 HLYWYQQ 179 (257)
T ss_dssp GEEEEEE
T ss_pred EEEEEEE
Confidence 7999874
No 183
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=2.3e-18 Score=123.60 Aligned_cols=116 Identities=28% Similarity=0.505 Sum_probs=95.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCC-eeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLP-SVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...
T Consensus 64 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 143 (182)
T 1rhf_A 64 LKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP 143 (182)
T ss_dssp ESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS
T ss_pred EeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC
Confidence 67999999999999999886665555599999999999888888889999999999999999988 99999999876311
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQV 128 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v 128 (292)
......|.|.++ +|+|.|+|.+.|..|... ..+.|.|
T Consensus 144 ---------~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 144 ---------APSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ---------EESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---------CCCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 114568899988 589999999999887653 2444443
No 184
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.79 E-value=4.7e-18 Score=125.11 Aligned_cols=125 Identities=30% Similarity=0.437 Sum_probs=95.3
Q ss_pred cccC-CcCCCeeEEEEEEecccccccccEEEEEeCC-------CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC
Q psy15128 2 ITEV-KKSDEGKYQCYVQNMVGERETKPALLTVHAP-------PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE 73 (292)
Q Consensus 2 i~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~ 73 (292)
|.++ +.+|+|.|+|.+.|..+..... +.|.|..+ |.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++
T Consensus 67 i~~v~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~ 145 (212)
T 2yd6_A 67 IQPLRTPRDEAIYECVASNNVGEISVS-TRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKD 145 (212)
T ss_dssp ECSCCTTTTCEEEEEEEEETTEEEEEE-EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET
T ss_pred EeccCCCCCCeEEEEEEEcCCCcEEEE-EEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEEC
Confidence 6788 4999999999999988876555 88888753 5666777777888999999999999999999999999
Q ss_pred CeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCCcCee-EEEEEEEE
Q psy15128 74 GSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGSTT-VRAFLQVT 129 (292)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v~ 129 (292)
+..+..... ..+.... ..+.|.|.+++.+|+|.|+|.|.|..|... ..+.+.+.
T Consensus 146 g~~l~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 146 FLPVDTSNN--NGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp TEEC--------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CccccCcCC--CceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 987643211 1122222 246899999999999999999999988654 33555554
No 185
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.78 E-value=5.6e-18 Score=120.01 Aligned_cols=82 Identities=18% Similarity=0.308 Sum_probs=57.8
Q ss_pred ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCC-------CcceeEEe-eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 45 DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGN-------AYGHLHVT-QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~-------~~~~~~~~-~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+.+.+|++++|.|.+.+ |.+.+.|++++..+...... ...+..+. .++.|.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456788999999998854 78899999988755322111 11233332 4578999999999999999999876
Q ss_pred CcCeeEEEEEEEE
Q psy15128 117 AGSTTVRAFLQVT 129 (292)
Q Consensus 117 ~~~~~~~~~l~v~ 129 (292)
.+ .....|.|.
T Consensus 83 ~~--~~~~~L~V~ 93 (171)
T 1ccz_A 83 TD--TMKFFLYVL 93 (171)
T ss_dssp CS--CEEEEEEEE
T ss_pred CC--cEEEEEEEE
Confidence 55 344444443
No 186
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.78 E-value=2.3e-18 Score=124.35 Aligned_cols=123 Identities=27% Similarity=0.485 Sum_probs=95.0
Q ss_pred cccCCcCCCeeEEEEEEeccccc-ccccEEEEEeCCCcEEeCCC--ccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER-ETKPALLTVHAPPSFVVRPQ--DQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+.. ....+.|.+..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 61 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~ 140 (189)
T 2v5t_A 61 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIE 140 (189)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECC
T ss_pred EeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECc
Confidence 67899999999999999876432 22336777777777665544 3456679999999999999999999999998763
Q ss_pred eccCCCcceeE-EeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 79 MFPGNAYGHLH-VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.. .... ......|.|.++..+|+|.|+|.+.|..|.......|.|.
T Consensus 141 ~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 141 EN-----EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CS-----SSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CC-----CcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 11 1122 2234689999999999999999999999888877777765
No 187
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.78 E-value=1.5e-18 Score=127.52 Aligned_cols=161 Identities=17% Similarity=0.224 Sum_probs=104.6
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eEE--eec-----cCCCcceeEEe---eecEEEEccCCCCCCeEEE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQV--LMF-----PGNAYGHLHVT---QEGTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~~--~~~-----~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~ 110 (292)
|....+.+|++++|.|.+.+.|.+.+.|+++. ... ... ......+.... ....|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 66778899999999999998888899999843 211 110 00111233322 2338999999999999999
Q ss_pred EEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeCCCC-Ccc--E
Q psy15128 111 CSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPE-DTR--I 184 (292)
Q Consensus 111 C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~-~~~--~ 184 (292)
|.+.+..+... ....+.|.. ...+|.+...+.......|+.++|.|.+.+. |.+ .+.|+++|.++... ... .
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 164 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKR--ADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTD 164 (210)
T ss_dssp EEECSSSSCEECCCEEEEECC--CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECC
T ss_pred EEEEcCCCceeCCCEEEEEcC--CCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCC
Confidence 99998755322 123444432 2234555554444445589999999999874 443 79999999988754 111 1
Q ss_pred EEcCCC------cEEEEeeecCCCCCC
Q psy15128 185 NVSSSG------SLQIDVLRDDFRAEP 205 (292)
Q Consensus 185 ~~~~~~------~l~i~~~~~~d~g~~ 205 (292)
....++ .|.|..+..+|+|.|
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y 191 (210)
T 1lk3_L 165 QDSKDSTYSMSSTLSLTKADYESHNLY 191 (210)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEE
T ss_pred ccCCCCCEEEEEEEEEChHHhccCCcE
Confidence 111222 478888877777743
No 188
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.78 E-value=1e-17 Score=119.64 Aligned_cols=74 Identities=16% Similarity=0.267 Sum_probs=52.4
Q ss_pred CccEEecCCcEEEEEEEee-eCCCeeEEEEC-CeEEeecc---------CCCcceeEE-eeecEEEEccCCCCCCeEEEE
Q psy15128 44 QDQKVGLNGIASFQCVAEG-SPLPSVFWTQE-GSQVLMFP---------GNAYGHLHV-TQEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~-~~~~~~~~---------~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~C 111 (292)
..+.+.+|++++|.|.+.+ .+.+.|.|+|. +..+.... ..-..+..+ ..++.|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 3567889999999998754 34679999994 43332111 111144555 356689999999999999999
Q ss_pred EEEeCC
Q psy15128 112 SALSVA 117 (292)
Q Consensus 112 ~~~~~~ 117 (292)
.+.+..
T Consensus 87 ~v~~~~ 92 (180)
T 2dru_A 87 RMLHET 92 (180)
T ss_dssp EEESSS
T ss_pred EEEcCC
Confidence 997654
No 189
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.78 E-value=4.3e-18 Score=125.27 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=93.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC--------------------CCcEE-eCCCccEEecCCcEEEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA--------------------PPSFV-VRPQDQKVGLNGIASFQCVA 60 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--------------------~p~~~-~~~~~~~~~~g~~~~l~C~~ 60 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|.. .|.+. ..+....+.+|+.+.|.|.+
T Consensus 63 i~~v~~~D~G~Y~C~~~n~~~~~~~~-~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 141 (212)
T 2r15_A 63 INEPTPNDKGKYVMELFDGKTGHQKT-VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV 141 (212)
T ss_dssp EESCCGGGCEEEEEEEECSSCEEEEE-EEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCcceEEE-EEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE
Confidence 67899999999999999977765544 5665542 33333 34556788999999999999
Q ss_pred eeeCCCeeEEEECCeEEeeccCCCcceeEEee----ecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 61 EGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ----EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 61 ~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.+.|.+.+.|++++..+... . +..... ...|.|.+++.+|.|.|+|.+.|..|.......|.|.
T Consensus 142 ~g~p~p~v~W~~~~~~~~~~--~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 142 WGDPPPEVSWLKNEKALAQT--D---HCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp ECSSCCEEEEEETTEEECCC--S---SEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCCceEEEEECCeECccC--C---CEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 99999999999999876421 1 122221 2489999999999999999999999887777777665
No 190
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=2.6e-18 Score=129.62 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=107.4
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+....... ..........|.|.+++.+|+|.|+|.+.
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIG-EHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEEC-BCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeee-eccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 3555555554 67889999999999864 567899999886432110000 00011235689999999999999999998
Q ss_pred eCCc---Ce--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEc--
Q psy15128 115 SVAG---ST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVS-- 187 (292)
Q Consensus 115 ~~~~---~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~-- 187 (292)
+... .. +....|.|. ...+.|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+..........
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~--~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVIT--GLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEE--CSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSS
T ss_pred ccCCCccccccCCCEEEecc--cCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCC
Confidence 6421 11 233444443 3345666666554 457899999999998765 46899999998765422111111
Q ss_pred -CCCcEEEEeeecCCCCCCcc
Q psy15128 188 -SSGSLQIDVLRDDFRAEPKD 207 (292)
Q Consensus 188 -~~~~l~i~~~~~~d~g~~~~ 207 (292)
..+.|.|.+++ |+|.|..
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C 177 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRC 177 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEE
T ss_pred ceeEEEEecccc--cCEEEEE
Confidence 14578999887 8885533
No 191
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.78 E-value=5.9e-18 Score=123.48 Aligned_cols=165 Identities=17% Similarity=0.324 Sum_probs=104.1
Q ss_pred ccEEecCCcEEEEEEEe----eeCCCeeEEEECCeEEeeccCCC-------cceeE--EeeecEEEEccCCCCCCeEEEE
Q psy15128 45 DQKVGLNGIASFQCVAE----GSPLPSVFWTQEGSQVLMFPGNA-------YGHLH--VTQEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~----~~~~~~v~W~~~~~~~~~~~~~~-------~~~~~--~~~~~~l~i~~~~~~d~g~Y~C 111 (292)
.+.+.+|++++|.|.+. +.|.+.+.|++++..+....... ..+.. ...+..|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 35678899999999985 34667899999988763221110 11121 1234589999999999999999
Q ss_pred EEEeCCcCeeE---EEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec-cCCCCceEEEeCCeeCCCCCccEEEc
Q psy15128 112 SALSVAGSTTV---RAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV-GSPPPHIRWYKNGNSLPPEDTRINVS 187 (292)
Q Consensus 112 ~~~~~~~~~~~---~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~ 187 (292)
.+.+..+.... ...+.+.+....+.|.+... ....|+.+.|.|.+. ++|.|.+.|+++|..+......+...
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 99997655432 33344443333333443321 123588999999994 88999999999999887643333333
Q ss_pred CC-CcEEEEeeecCCCCCCcceEEeCCCceEEEeeCC
Q psy15128 188 SS-GSLQIDVLRDDFRAEPKDTRVASGETALLECGPP 223 (292)
Q Consensus 188 ~~-~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C~~~ 223 (292)
.+ +.+.+... ..+...+.-.++|.|.
T Consensus 159 ~~~~~~~~~~~----------~~v~~~d~g~Y~C~a~ 185 (201)
T 1dr9_A 159 PETELYAVSSK----------LDFNMTTNHSFMCLIK 185 (201)
T ss_dssp TTTCCEEEEEE----------EEEETTSCEEEEEEEE
T ss_pred CCCcEEEEEEE----------EEEEecCCCEEEEEEe
Confidence 33 33333211 1222334457888873
No 192
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.78 E-value=6.8e-19 Score=126.58 Aligned_cols=131 Identities=19% Similarity=0.189 Sum_probs=95.3
Q ss_pred CCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCC--------
Q psy15128 134 TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEP-------- 205 (292)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~-------- 205 (292)
.++|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|++... ....+.|.|.++..+|+|.|
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCcccEEEECcCChhhCceEEEEEEcCC
Confidence 456677666664 7889999999999977 67899999998651 12445677777777777721
Q ss_pred -------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCcccccc
Q psy15128 206 -------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRR 260 (292)
Q Consensus 206 -------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+...+.+|+.++|.|.+ .+.| +.+.|+++|..+.... .. ...
T Consensus 76 g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~-~~~~-~~~~w~k~g~~~~~~~--~~---------~~~ 142 (184)
T 2gi7_A 76 LWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQT-RYGF-DQFALYKEGDPAPYKN--PE---------RWY 142 (184)
T ss_dssp EEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEEC-SSCC-CEEEEEECCCCTTSCC--CC---------EEE
T ss_pred CccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEc-CCCC-cEEEEEECCCcCccee--cC---------CCc
Confidence 11234579999999997 5554 6999999998774211 10 112
Q ss_pred ccccccccccccccceeEEEEeecccc
Q psy15128 261 SRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 261 ~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
...|.|..+..+|+|.|+|.|.|..+.
T Consensus 143 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 143 RASFPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp EESSSEEEETTCCSEEEEEEEECTTST
T ss_pred eEEEEEccCCccCCeEEEEEEEeCCCC
Confidence 236889999999999999999998754
No 193
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.78 E-value=4.6e-18 Score=126.08 Aligned_cols=125 Identities=22% Similarity=0.352 Sum_probs=74.0
Q ss_pred ccEEecCCcEEEEEEEeeeCCC---eeEEEECCeEEeeccC-----------CCcce----------eEEeeecEEEEcc
Q psy15128 45 DQKVGLNGIASFQCVAEGSPLP---SVFWTQEGSQVLMFPG-----------NAYGH----------LHVTQEGTLRIQG 100 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~~~~-----------~~~~~----------~~~~~~~~l~i~~ 100 (292)
.+.+..|++++|.|.+.+.+.+ .|.|+|++..+..... ....+ .....+..|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 4567889999999999876655 4899997654321100 00000 0112245799999
Q ss_pred CCCCCCeEEEEEEEeCCcCeeEEE-EEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEeCC
Q psy15128 101 VQKEDAGFFVCSALSVAGSTTVRA-FLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYKNG 174 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~~~~~-~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~~~ 174 (292)
++.+|+|.|+|.+.+..+...... .+.+. .++.....+.......++.+.+.|.+ .+.|++.+.|++++
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~ 160 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVI-----AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSL 160 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSS
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeee-----cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECC
Confidence 999999999999988655433322 22222 12333333333344455566666654 34456667776654
No 194
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.78 E-value=4.9e-18 Score=125.42 Aligned_cols=125 Identities=26% Similarity=0.487 Sum_probs=97.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC-CCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA-PPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 73 i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~ 152 (217)
T 2vr9_A 73 MQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDD 152 (217)
T ss_dssp CBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECC
T ss_pred eccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCc
Confidence 6789999999999999998877655447777765 5566666777788999999999998 8899999999999987742
Q ss_pred ccC---CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 80 FPG---NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 80 ~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
... ....+......+.|.|.+++.+|.|.|+|.+.|..|.......+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~ 202 (217)
T 2vr9_A 153 LKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAK 202 (217)
T ss_dssp CCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEE
T ss_pred ccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEE
Confidence 211 11223334456689999999999999999999998876655443
No 195
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.77 E-value=5.1e-19 Score=130.36 Aligned_cols=123 Identities=25% Similarity=0.318 Sum_probs=95.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++......
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~ 166 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKK-FLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccE-EEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC
Confidence 78999999999999999987766555 89999988876555444557889999999999 78899999999965432211
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
. ........+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 167 ~----~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 167 T----PWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp G----GGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred c----cceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 1 11112234589999999999999999999998887766666553
No 196
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.77 E-value=3.1e-17 Score=123.19 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=84.0
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e--EEeecc-----CCCcceeEEe---eecEEEEccCCCCCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S--QVLMFP-----GNAYGHLHVT---QEGTLRIQGVQKEDA 106 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~--~~~~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d~ 106 (292)
+...|....+.+|++++|.|.+.+.|.+.+.|+|+. . ...... .....++... ....|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 445566778999999999999988888899999853 1 111110 0112233322 234799999999999
Q ss_pred eEEEEEEEeCCcCe-eEEEEEEEEeecC--------CCCCeEEeCCCCceecCCCeEEEEeEeccCC--CCceEEEeC
Q psy15128 107 GFFVCSALSVAGST-TVRAFLQVTSVED--------TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP--PPHIRWYKN 173 (292)
Q Consensus 107 g~Y~C~~~~~~~~~-~~~~~l~v~~~~~--------~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~~ 173 (292)
|.|.|.+.+..+.. .....|.|..... ..++.....+....+.+|++++|.|.+.+.| .+.+.|+++
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 99999998764321 1223455432110 0011222223334578888888888887765 467888875
No 197
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.77 E-value=1.1e-17 Score=121.15 Aligned_cols=125 Identities=28% Similarity=0.540 Sum_probs=95.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+ ...+.+|+.+.|.|.+.+.|.+.+.|++++.......
T Consensus 62 i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 62 VRNIINSDGGPYVCRATNKAGEDEKQ-AFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECT
T ss_pred EecCChhcCcEEEEEEEccccccceE-EEEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeec
Confidence 67899999999999999987776655 888888877765543 4567789999999999999999999999843332222
Q ss_pred CC--CcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 82 GN--AYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 82 ~~--~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
.. ...+.... ....|.|.+++.+|.|.|+|.+.|..|.....+.|.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 140 GDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 11 11222222 2358999999999999999999999888776666655
No 198
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.77 E-value=7.1e-18 Score=127.83 Aligned_cols=130 Identities=16% Similarity=0.247 Sum_probs=75.6
Q ss_pred CCccEEecCCcEEEEEEEeee--CCCeeEEEECC--e--EEeeccC-----CCcceeEEee---ecEEEEccCCCCCCeE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S--QVLMFPG-----NAYGHLHVTQ---EGTLRIQGVQKEDAGF 108 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~--~~~~~~~-----~~~~~~~~~~---~~~l~i~~~~~~d~g~ 108 (292)
+....+.+|++++|.|.+.+. +.+.+.|+|.. . ....... ....++.... ...|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 445678899999999999876 67899999842 1 1111100 0112332222 2379999999999999
Q ss_pred EEEEEEeCCcCe---eEEEEEEEEeecCCC----------------CCeEEeCCCCceecCCCeEEEEeEeccCC--CCc
Q psy15128 109 FVCSALSVAGST---TVRAFLQVTSVEDTP----------------PPIVQVGPSNQTLPLHSVAFLPCQAVGSP--PPH 167 (292)
Q Consensus 109 Y~C~~~~~~~~~---~~~~~l~v~~~~~~~----------------~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~ 167 (292)
|+|.+.+..+.. .....|.|....... .+.+. .+....+.+|++++|.|.+.+.+ .+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLV-ESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEE-EECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEE-cCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 999999864322 122344443211000 11122 22333466677777777776554 456
Q ss_pred eEEEeC
Q psy15128 168 IRWYKN 173 (292)
Q Consensus 168 ~~W~~~ 173 (292)
+.|+++
T Consensus 168 v~W~r~ 173 (256)
T 3ux9_B 168 MSWVRQ 173 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777764
No 199
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.77 E-value=2.3e-18 Score=126.79 Aligned_cols=129 Identities=18% Similarity=0.177 Sum_probs=88.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC--CCcEEeCCCc-cEEecCCcEEEEEEEeeeC--CCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA--PPSFVVRPQD-QKVGLNGIASFQCVAEGSP--LPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+...+..+.|.|.. +|.+...+.. ..+.+|+.++|.|.+.+.| .+.+.|++++..
T Consensus 68 I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~ 147 (213)
T 2x1w_L 68 IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK 147 (213)
T ss_dssp EEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSS
T ss_pred EccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCc
Confidence 6789999999999999985544444437777754 3344444433 4889999999999999854 347999998865
Q ss_pred Eeecc----CCCcce--eEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 77 VLMFP----GNAYGH--LHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 77 ~~~~~----~~~~~~--~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
+.... ...... ......+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 148 HQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp CCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 32100 000000 0022345799999999999999999999988887777777753
No 200
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=1.7e-18 Score=129.47 Aligned_cols=136 Identities=18% Similarity=0.274 Sum_probs=85.2
Q ss_pred CCccEEecCCcEEEEEEEeeeC-CC-eeEEEECCe--EE--eecc-----CCCcceeEEe---eecEEEEccCCCCCCeE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP-LP-SVFWTQEGS--QV--LMFP-----GNAYGHLHVT---QEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~-~~-~v~W~~~~~--~~--~~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d~g~ 108 (292)
+....+.+|++++|.|.+.+.+ .+ .+.|+|+.. .. .... .....+.... ....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 6677889999999999998754 34 699998632 11 1100 0011223222 23489999999999999
Q ss_pred EEEEEEeCCcC---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCC
Q psy15128 109 FVCSALSVAGS---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPP 179 (292)
Q Consensus 109 Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~ 179 (292)
|+|.+.+..+. ......+.|.... ..+|.+...+.......|+.++|.|.+.+. |+ +.+.|+++|..+..
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 180 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQP-KAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKA 180 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCC-CCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCS
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCC-CCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCC
Confidence 99999987662 1112334432111 123333332233334468899999999876 33 37999999887654
No 201
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.77 E-value=5.5e-18 Score=125.28 Aligned_cols=117 Identities=23% Similarity=0.323 Sum_probs=94.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCC---------------CcEEeCCCccEEecCCcEEEEEEEeeeCCC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAP---------------PSFVVRPQDQKVGLNGIASFQCVAEGSPLP 66 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 66 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|... |.+...+....+.+|+.+.|.|.+.+.|.+
T Consensus 69 i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~ 148 (218)
T 3k0w_A 69 FNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP 148 (218)
T ss_dssp ETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC
T ss_pred EccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC
Confidence 67899999999999999987765555588888765 566677777889999999999999999999
Q ss_pred eeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC-eeEEEEEEEE
Q psy15128 67 SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS-TTVRAFLQVT 129 (292)
Q Consensus 67 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~-~~~~~~l~v~ 129 (292)
.+.|++++..+.. .....|.|.+++.+|.|.|+|.+.|..|. ....+.|.|.
T Consensus 149 ~v~W~~~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 149 HYQWFKNELPLTH-----------ETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp EEEEEETTEECTT-----------CCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred eEEEEECCEECCC-----------CCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 9999999886531 12357999999999999999999997665 3344555554
No 202
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.77 E-value=1e-18 Score=128.89 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=98.6
Q ss_pred CCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEE-EcCCC--cEEEEeeecCCCCCC-----
Q psy15128 134 TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRIN-VSSSG--SLQIDVLRDDFRAEP----- 205 (292)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~-~~~~~--~l~i~~~~~~d~g~~----- 205 (292)
.++|.+...|. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+........ ....+ .|.|.++..+|+|.|
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 45677777766 46889999999999976 5788999999876542111110 11234 788888888888811
Q ss_pred ----------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccc
Q psy15128 206 ----------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFD 257 (292)
Q Consensus 206 ----------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 257 (292)
+...+.+|+.++|.|.+ .+.|.+.+.|+|+|..+.. ... ..
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~---~~~-~~------ 153 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLP---QHQ-SG------ 153 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCC---SEE-EC------
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeC-CCCCCCEEEEEECCCcccc---ccc-CC------
Confidence 12356789999999975 6677889999999987642 111 11
Q ss_pred cccccccccccccccccceeEEEEeecc
Q psy15128 258 SRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 258 ~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
.....|.|..++.+|+|.|+|.|.|..
T Consensus 154 -~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 154 -EHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp -SSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred -CccCEEEEccCCcccCEEEEEEEEcCC
Confidence 122368899999999999999999864
No 203
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=9e-18 Score=122.62 Aligned_cols=114 Identities=19% Similarity=0.297 Sum_probs=87.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+. .. ...+.|.|..+|.+...+. ..+.+|+.++|.|.+.+. |.+.+.|++++..+..
T Consensus 58 i~~v~~~D~G~Y~C~a~n~--~~-s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~- 132 (204)
T 3sgj_C 58 IDAATVDDSGEYRCQTQLS--TL-SDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY- 132 (204)
T ss_dssp ESSCCGGGCEEEEEEETTS--BC-CCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-
T ss_pred EecccccCCEEEEEEeCCC--cc-cccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-
Confidence 7889999999999999863 22 2338899988776655554 678899999999999665 5678999999987631
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCc-CeeEEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG-STTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~-~~~~~~~l~v~ 129 (292)
......|.|.+++.+|+|.|+|.+.|..+ ..+..+.|.|.
T Consensus 133 ---------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 133 ---------FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp ---------EEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ---------ccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEe
Confidence 22356899999999999999999999433 33334455554
No 204
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.76 E-value=2.9e-18 Score=121.72 Aligned_cols=143 Identities=15% Similarity=0.222 Sum_probs=105.0
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeC-CCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSP-LPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+.. ....+.+.+++.+|+|.|+|.+.+
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~------------~~~~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPT------------HTQPSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTT------------CCSSEEEEECCGGGCEEEEEEETT
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEccc------------CccceEEEecccccCeEEEEEEeC
Confidence 4555667677899999999999998876 568999999987631 123466778999999999999986
Q ss_pred CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec-cCCCCceEEEeCCeeCCCCCccEEEcCCCcEEE
Q psy15128 116 VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV-GSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQI 194 (292)
Q Consensus 116 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i 194 (292)
..... ...+.|.. ++.... +....+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ....+.|.|
T Consensus 73 ~~~s~--~~~l~v~~-----~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~------~~~~~~L~i 138 (170)
T 3ry4_A 73 TSLSD--PVHLTVLF-----EWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF------SHLDPTFSI 138 (170)
T ss_dssp SBCCC--CEEEEEEC-----CSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE------ESSCCEEEE
T ss_pred CCceE--eEEEEEEC-----CceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc------cCCCCeEEE
Confidence 54332 34455542 333333 3445688999999999994 556689999999887642 224567999
Q ss_pred EeeecCCCCCC
Q psy15128 195 DVLRDDFRAEP 205 (292)
Q Consensus 195 ~~~~~~d~g~~ 205 (292)
.++..+|+|.|
T Consensus 139 ~~v~~~d~G~Y 149 (170)
T 3ry4_A 139 PQANHSHSGDY 149 (170)
T ss_dssp SSCCGGGCEEE
T ss_pred EeccccCCEEE
Confidence 99998888844
No 205
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.76 E-value=7.7e-17 Score=121.47 Aligned_cols=136 Identities=18% Similarity=0.229 Sum_probs=84.6
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeC-----CCeeEEEECC--e--EEeecc-----CCCcceeEEee---ecEEEEccC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSP-----LPSVFWTQEG--S--QVLMFP-----GNAYGHLHVTQ---EGTLRIQGV 101 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~v~W~~~~--~--~~~~~~-----~~~~~~~~~~~---~~~l~i~~~ 101 (292)
+...|....+.+|++++|.|.+.+.+ .+.+.|+|.. . ...... .....++.... ...|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 34456677889999999999998876 6799999853 2 111110 00112333222 237999999
Q ss_pred CCCCCeEEEEEEEeCCcCe-eEEEEEEEEeecC--------CCCCeEEeCCCCceecCCCeEEEEeEeccCC--CCceEE
Q psy15128 102 QKEDAGFFVCSALSVAGST-TVRAFLQVTSVED--------TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP--PPHIRW 170 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~--------~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~~W 170 (292)
+.+|+|.|+|.+.+..+.. .....|.|..... ..++.....+....+.+|++++|.|.+.+.+ .+.+.|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 9999999999998764431 1224455543110 0022222233334588899999999987764 457899
Q ss_pred EeCC
Q psy15128 171 YKNG 174 (292)
Q Consensus 171 ~~~~ 174 (292)
++++
T Consensus 164 ~k~~ 167 (247)
T 1svz_A 164 VKQA 167 (247)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9864
No 206
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=121.39 Aligned_cols=125 Identities=21% Similarity=0.327 Sum_probs=95.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeC---CCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVR---PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 67 i~~~~~~d~G~Y~C~~~n~~~~~~~~-~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~ 145 (197)
T 3lcy_A 67 VMTEEQEDEGVYTCIATNEVGEVETS-SKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQ 145 (197)
T ss_dssp EECCSGGGCEEEEEEEECSSCEEEEE-EEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECC
T ss_pred EecCCccCCEEEEEEEECCCCceeEE-EEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECC
Confidence 67899999999999999887776655 78888776655432 244567889999999999999999999999998763
Q ss_pred eccCCCcceeEEeeecEEEEccCCC-CCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQK-EDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
. ..............|.|.++.. +|.|.|+|.+.|..|.....+.|.|.
T Consensus 146 ~--~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 146 N--SENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp C--CSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred C--CCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 1 1111111111225899999995 89999999999999888777777664
No 207
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.76 E-value=7.5e-18 Score=123.92 Aligned_cols=128 Identities=23% Similarity=0.380 Sum_probs=94.3
Q ss_pred cccCCcCCCeeEEEEEEeccccc-ccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEE-EeeeCCCeeEEEECCe-EEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER-ETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCV-AEGSPLPSVFWTQEGS-QVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~v~W~~~~~-~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+|.+...+....+.+|+.+.|.|. +.+.|.+.+.|++++. .+.
T Consensus 69 i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 69 FSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLT 148 (212)
T ss_dssp ESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC
T ss_pred EcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccc
Confidence 67899999999999999976622 23338888888887766566678899999999999 6888999999999998 654
Q ss_pred eccCCC----cceeEE-eeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 79 MFPGNA----YGHLHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 79 ~~~~~~----~~~~~~-~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
...... ...... ...+.|.|.+++.+|.|.|+|.+.|..|....+..+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~ 204 (212)
T 1f97_A 149 ADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204 (212)
T ss_dssp -----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEE
T ss_pred ccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEE
Confidence 221110 011111 235689999999999999999999998887444334333
No 208
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.76 E-value=1.2e-17 Score=122.85 Aligned_cols=162 Identities=15% Similarity=0.170 Sum_probs=102.1
Q ss_pred CCccEEecCCcEEEEEEEeeeC---CCeeEEEECC--eEEe--ec-----cCCCcceeEEe---eecEEEEccCCCCCCe
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP---LPSVFWTQEG--SQVL--MF-----PGNAYGHLHVT---QEGTLRIQGVQKEDAG 107 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~---~~~v~W~~~~--~~~~--~~-----~~~~~~~~~~~---~~~~l~i~~~~~~d~g 107 (292)
|....+.+|++++|.|.+.+.| .+.+.|+|++ .... .. ......+.... ....|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6677889999999999998876 4689999863 2221 10 00111233222 2348999999999999
Q ss_pred EEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCC-CC-ceEEEeCCeeCCCCCc--
Q psy15128 108 FFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP-PP-HIRWYKNGNSLPPEDT-- 182 (292)
Q Consensus 108 ~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~-~~~W~~~~~~l~~~~~-- 182 (292)
.|+|.+.+..+.. .....+.|... ...+|.+...+.......|+.++|.|.+.+.+ ++ .+.|+++|.++.....
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~-~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 165 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQ-PKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETT 165 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCS-CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEecC-CCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecC
Confidence 9999999865421 12234444321 11355555544444455799999999998754 33 7999999998865321
Q ss_pred cEEEcCCC------cEEEEeeecCCCCCC
Q psy15128 183 RINVSSSG------SLQIDVLRDDFRAEP 205 (292)
Q Consensus 183 ~~~~~~~~------~l~i~~~~~~d~g~~ 205 (292)
......++ .|.|..+..+|.|.|
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y 194 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSY 194 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcE
Confidence 11222333 366666666676643
No 209
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=7e-17 Score=121.69 Aligned_cols=162 Identities=18% Similarity=0.259 Sum_probs=103.6
Q ss_pred CccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEE--ee-c---------cCCCcceeEEee-----ecEEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQV--LM-F---------PGNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~--~~-~---------~~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+.| .+.+.|+|+. ... .. . ......+..... ...|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 456788999999999998876 5789999842 111 10 0 011123333332 2479999999
Q ss_pred CCCCeEEEEEEEeCCcCe--eEEEEEEEEeec----------CCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEE
Q psy15128 103 KEDAGFFVCSALSVAGST--TVRAFLQVTSVE----------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRW 170 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~~--~~~~~l~v~~~~----------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W 170 (292)
.+|+|.|+|.+.+..+.. .....|.|.... ...++.+...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 999999999999862221 122344443210 01234444455666788999999999999998889999
Q ss_pred Ee--CCeeCC-----------CCCccEEEcCC---CcEEEEeeecCCCCCC
Q psy15128 171 YK--NGNSLP-----------PEDTRINVSSS---GSLQIDVLRDDFRAEP 205 (292)
Q Consensus 171 ~~--~~~~l~-----------~~~~~~~~~~~---~~l~i~~~~~~d~g~~ 205 (292)
+| ++..+. ....++..... .+|.|.++..+|+|.|
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 220 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 220 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEE
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEE
Confidence 99 554431 11123333222 2588888888888843
No 210
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.75 E-value=1.2e-17 Score=123.08 Aligned_cols=140 Identities=16% Similarity=0.276 Sum_probs=95.3
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC---eE--Eeecc----CCCcceeEEe---eecEEEEccCCCCC
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG---SQ--VLMFP----GNAYGHLHVT---QEGTLRIQGVQKED 105 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~---~~--~~~~~----~~~~~~~~~~---~~~~l~i~~~~~~d 105 (292)
.+...+....+.+|+.++|.|.+.+.|.+.+.|+|.. .. +.... .....++... ....|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 4445566778999999999999998888899999832 11 11100 0111222222 23489999999999
Q ss_pred CeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC--CceEEEeCCeeCCC
Q psy15128 106 AGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP--PHIRWYKNGNSLPP 179 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~~W~~~~~~l~~ 179 (292)
+|.|+|.+.+..+.. .....+.| .....+|.+...+....+..|+.++|.|.+.+.++ +.+.|+++|..+..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V--~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEI--KRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEE--CCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred CEEEEEecccCCceEEcCCceEEE--eccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 999999998764322 22234444 22234566666555556668889999999987644 47999999998865
No 211
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.75 E-value=3.4e-18 Score=124.80 Aligned_cols=122 Identities=16% Similarity=0.265 Sum_probs=90.4
Q ss_pred ecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCCCc---------------------
Q psy15128 148 LPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAEPK--------------------- 206 (292)
Q Consensus 148 ~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~~~--------------------- 206 (292)
+.+|++++|.|.+ |.+.+.|+|+|..+... ....+.|.|.++..+|+|.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~ 86 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSAD 86 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC----
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEeccc
Confidence 3579999999998 78899999999877531 123457888888877777321
Q ss_pred ----------------------------------ceEEe-CCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEec
Q psy15128 207 ----------------------------------DTRVA-SGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSIL 251 (292)
Q Consensus 207 ----------------------------------~~~~~-~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~ 251 (292)
...+. +|+.++|.|. +.|.+.+.|+++|..+...........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~~~~~~~~~ 163 (204)
T 1sy6_A 87 DAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP---QYPGSEILWQHNDKNIGGDEDDKNIGS 163 (204)
T ss_dssp --------------------------------CCCCEEEEETTEEEEECS---CCCSSCEEEEETTEEESCCTTCTTEEE
T ss_pred cccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC---CCCCCceEEEECCEECCCccCCceEec
Confidence 01233 8999999997 678889999999998854322221111
Q ss_pred CCCccccccccccccccc-cccccceeEEEEeeccccc
Q psy15128 252 GDPWFDSRRSRSIFGSVL-GALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 252 ~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~a~n~~g~~ 288 (292)
....|.|..+ ...|+|.|+|.|.|..|..
T Consensus 164 --------~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 164 --------DEDHLSLKEFSELEQSGYYVCYPRGSKPED 193 (204)
T ss_dssp --------ETTEEEETTCCHHHHCEEEEEEETTSCGGG
T ss_pred --------CCCEEEEeeCCccccCEEEEEEeccCCCCc
Confidence 1236889999 9999999999999999974
No 212
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.75 E-value=2.6e-17 Score=119.99 Aligned_cols=122 Identities=26% Similarity=0.425 Sum_probs=93.0
Q ss_pred cccCCcCCCeeEEEEEEeccccccc--ccEEEEEe-------CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERET--KPALLTVH-------APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~--~~~~l~v~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.+..+.... ..+.+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 70 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 149 (201)
T 3s97_C 70 IANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRK 149 (201)
T ss_dssp ESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEE
T ss_pred ECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEe
Confidence 6789999999999999986654432 22444443 23445555557788999999999999999999999999
Q ss_pred CCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 73 EGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
++..+. . ..........|.|.++..+|.|.|+|.+.|..|.......|.|.
T Consensus 150 ~~~~~~--~----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 150 VLEPMP--S----TAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TTBCCC--T----TCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcCC--C----ceeecCCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 987542 1 11222335689999999999999999999998888777777664
No 213
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=4e-17 Score=117.32 Aligned_cols=118 Identities=21% Similarity=0.395 Sum_probs=91.5
Q ss_pred CcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeC-CCeeEEEE---CCeEEeecc
Q psy15128 6 KKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSP-LPSVFWTQ---EGSQVLMFP 81 (292)
Q Consensus 6 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~v~W~~---~~~~~~~~~ 81 (292)
+.+|+|.|+|.+.+. .. ..+.|.|..+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++......
T Consensus 57 ~~~d~G~Y~C~~~n~---~~-~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~- 131 (184)
T 3b5h_A 57 SDDQWGEYSCVFLPE---PM-GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMN- 131 (184)
T ss_dssp GGGCCEEEEEEEEST---TS-CEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCT-
T ss_pred chhhCeEEEEEEECC---cC-cEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeec-
Confidence 578999999999972 22 33899999999988888777899999999999999988 78999999 45443211
Q ss_pred CCCcceeEEee---ecEEEEccCC-CCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 82 GNAYGHLHVTQ---EGTLRIQGVQ-KEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 82 ~~~~~~~~~~~---~~~l~i~~~~-~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
....+..... ...|.|.+++ .+|.|.|+|.+.|..|.....+.|.|.
T Consensus 132 -~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 132 -GSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp -TGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -CCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 1112233322 2489999999 899999999999999887777666653
No 214
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.75 E-value=7.6e-17 Score=116.69 Aligned_cols=132 Identities=15% Similarity=0.174 Sum_probs=90.2
Q ss_pred CCCccEEecCCcEEEEEEEee-eCCCeeEEEECCeEEeecc-CCC------------cceeEEeeecEEEEccCCCCCCe
Q psy15128 42 RPQDQKVGLNGIASFQCVAEG-SPLPSVFWTQEGSQVLMFP-GNA------------YGHLHVTQEGTLRIQGVQKEDAG 107 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~-~~~------------~~~~~~~~~~~l~i~~~~~~d~g 107 (292)
.|..+.+.+|++++|.|.+.+ .+.+.+.|++++..+.... +.. ..+..+..++.|+|.+++.+|+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 345677889999999999875 3456899999876553221 110 12334444678999999999999
Q ss_pred EEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCC-eEEEEeEeccC-CCCceEEEeCCeeC
Q psy15128 108 FFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHS-VAFLPCQAVGS-PPPHIRWYKNGNSL 177 (292)
Q Consensus 108 ~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~-~v~l~C~~~~~-p~~~~~W~~~~~~l 177 (292)
.|+|.+.+..+.......|.|.. ....|.+...+ .....|. .++|.|.+.+. |.+.+.|++++..+
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~--~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l 151 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILR--QLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL 151 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEC--CCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred eEEEEEEecCCCeEEEEEEEEEc--cCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEc
Confidence 99999998776655555565542 12223444333 1233465 89999999885 57899999998765
No 215
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.74 E-value=1e-16 Score=121.88 Aligned_cols=138 Identities=16% Similarity=0.194 Sum_probs=85.2
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeC------CCeeEEEECC--eEE--eecc-----CCCcceeEEee---ecEEEE
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSP------LPSVFWTQEG--SQV--LMFP-----GNAYGHLHVTQ---EGTLRI 98 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~------~~~v~W~~~~--~~~--~~~~-----~~~~~~~~~~~---~~~l~i 98 (292)
+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|+|.. ... .... .....++.... ...|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 4455566778899999999999998776 5789999852 211 1110 00122333322 348999
Q ss_pred ccCCCCCCeEEEEEEEeCCcCe-eEEEEEEEEeecC--------------CCCCeEEeCCCCceecCCCeEEEEeEeccC
Q psy15128 99 QGVQKEDAGFFVCSALSVAGST-TVRAFLQVTSVED--------------TPPPIVQVGPSNQTLPLHSVAFLPCQAVGS 163 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~--------------~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 163 (292)
.+++.+|+|.|.|.+.+..+.. .....|.|..... ..+......+....+.+|++++|.|.+.+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 165 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGY 165 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCC
Confidence 9999999999999998764321 1223455543210 011122222333457788888888888766
Q ss_pred CC--CceEEEeCC
Q psy15128 164 PP--PHIRWYKNG 174 (292)
Q Consensus 164 p~--~~~~W~~~~ 174 (292)
+. +.+.|+++.
T Consensus 166 ~~~~~~v~W~r~~ 178 (264)
T 2gjj_A 166 SFTGYFINWVKKN 178 (264)
T ss_dssp CGGGSEEEEEEEC
T ss_pred ccCCeEEEEEEEC
Confidence 53 678888763
No 216
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.74 E-value=5.6e-17 Score=137.25 Aligned_cols=132 Identities=20% Similarity=0.323 Sum_probs=92.4
Q ss_pred CccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEeec-----c--CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 44 QDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLMF-----P--GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~-----~--~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
....+.+|++++|.|.+ .+.|.+.+.|++++..+... + .....+.....++.|.|.+++.+|+|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 34567899999999998 67788899999986522111 0 0112234445566899999999999999999999
Q ss_pred CCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCe-EEEEeEecc-CCCCceEEEeCCeeCCC
Q psy15128 116 VAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSV-AFLPCQAVG-SPPPHIRWYKNGNSLPP 179 (292)
Q Consensus 116 ~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~-v~l~C~~~~-~p~~~~~W~~~~~~l~~ 179 (292)
..+.. .....|.|.. ....|.+.. ....+..|.. +.|.|.+.+ +|.|.+.|++++.++..
T Consensus 454 ~~~~~~~~~~~l~V~~--~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~ 516 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQ--IPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVP 516 (581)
T ss_dssp TTSCEEEEEEEEEEEB--CCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCT
T ss_pred CCCceeEEEEEEEEEc--CCCCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCC
Confidence 87776 5556666653 222333332 2223555544 567999987 58999999999998865
No 217
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.74 E-value=2e-17 Score=126.31 Aligned_cols=167 Identities=21% Similarity=0.322 Sum_probs=88.7
Q ss_pred CCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eE--Eeec
Q psy15128 5 VKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQ--VLMF 80 (292)
Q Consensus 5 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~--~~~~ 80 (292)
.+++|.+.|.|.+.+..+..... . ...+...+..+.+.+|++++|.|.+.+ +.+.+.|+|.. .. ....
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~-~------~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGG-G------GMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp --------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccc-c------ceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 56889999999998876543322 2 233444555678899999999999865 66799999822 11 1100
Q ss_pred -cCCC-------cc-eeEEe----eecEEEEccCCCCCCeEEEEEEEeCCcC----eeEEEEEEEEeec-CCCCCeEE-e
Q psy15128 81 -PGNA-------YG-HLHVT----QEGTLRIQGVQKEDAGFFVCSALSVAGS----TTVRAFLQVTSVE-DTPPPIVQ-V 141 (292)
Q Consensus 81 -~~~~-------~~-~~~~~----~~~~l~i~~~~~~d~g~Y~C~~~~~~~~----~~~~~~l~v~~~~-~~~~~~~~-~ 141 (292)
.... .. ++... .+..|.|.+++.+|+|.|.|.+.+.... ......+.|.... ...+|.+. .
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 0000 00 22222 2448999999999999999999864221 1122345554211 11133333 3
Q ss_pred CCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCeeCCC
Q psy15128 142 GPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNSLPP 179 (292)
Q Consensus 142 ~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~l~~ 179 (292)
.+....+..|+.++|.|.+.+ .|.+ .+.|+++|.++..
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCC
Confidence 344444566999999999987 5656 7999999998865
No 218
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.74 E-value=5.1e-17 Score=118.44 Aligned_cols=117 Identities=10% Similarity=0.011 Sum_probs=84.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeC-C--CeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSP-L--PSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~--~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.|..+..... +.|.|..+|..........+.+|+.++|.|.+.+.+ . +.+.|++++..+.
T Consensus 58 I~~v~~~D~G~Y~C~a~n~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 58 MNPVSFGNEHSYLCTATCESRKLEKG-IQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp ESSCCGGGCSEEEEEEEETTEEEEEE-EEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred ECcCCHHHCEEEEEEEEECCceEeeE-EEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 78899999999999999987765444 899998776533222226688999999999998864 3 3789999998764
Q ss_pred eccCCCc--ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 79 MFPGNAY--GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
....... ..........|.|.....+|.|.|+|.|.|..+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 137 SQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp EEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred ccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 3221110 0001222446788888889999999999997765
No 219
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.74 E-value=2e-17 Score=123.82 Aligned_cols=141 Identities=15% Similarity=0.227 Sum_probs=96.0
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e---EEeecc----CCCcceeEEe---eecEEEEccCCCC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S---QVLMFP----GNAYGHLHVT---QEGTLRIQGVQKE 104 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~---~~~~~~----~~~~~~~~~~---~~~~l~i~~~~~~ 104 (292)
+.+...+....+.+|++++|.|.+.+.+.+.+.|+|.. . .+.... .....++... ....|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 34555567788999999999999988888899999843 1 111000 0111222222 3457999999999
Q ss_pred CCeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceEEEeCCeeCCC
Q psy15128 105 DAGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWYKNGNSLPP 179 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~l~~ 179 (292)
|+|.|+|.+.+..+.. .....+.|.. ...+|.+...+.......|+.++|.|.+.+. | .+.+.|+++|..+..
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKR--TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEEC--CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEec--CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 9999999998765422 2223455543 2345566555555555678899999999874 4 578999999998875
No 220
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.74 E-value=2.4e-16 Score=116.47 Aligned_cols=175 Identities=17% Similarity=0.227 Sum_probs=105.3
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEEC--CeEEee---cc---------CCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQE--GSQVLM---FP---------GNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~--~~~~~~---~~---------~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|+ +..+.. .. .....+..... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 4456788999999999998764 678999996 332210 00 00123333322 358999999
Q ss_pred CCCCCeEEEEEEEeCCcCe----eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCe
Q psy15128 102 QKEDAGFFVCSALSVAGST----TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGN 175 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~ 175 (292)
+.+|+|.|+|.+.+..+.. .....|.|.... ..+|.+...+....+.+|+.++|.|.+.+ +|.| .+.|++++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC-CBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCC-CCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 9999999999999875321 123445554321 12344443333344678999999999988 7888 999999987
Q ss_pred eCCCCC-ccEEEc----CCCcEEEEeeecCCCCCCcceEEeCCCceEEE
Q psy15128 176 SLPPED-TRINVS----SSGSLQIDVLRDDFRAEPKDTRVASGETALLE 219 (292)
Q Consensus 176 ~l~~~~-~~~~~~----~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~ 219 (292)
.+.... ...... ....|.|. ....|.|.|.......+....+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~n~~~~~~~~ 213 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVP-SSPRPSETVTCNVAHPASSTKVD 213 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEE-SSSTTTSCCEEEEEEGGGTEEEE
T ss_pred ccceEecCCcccCCeEEEEEEEEEe-cccCCCCEEEEEEEeCCCCccEE
Confidence 653111 111110 01246663 33335576655544444433333
No 221
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.73 E-value=7.3e-17 Score=123.58 Aligned_cols=169 Identities=17% Similarity=0.224 Sum_probs=106.2
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCe-----EEeecc----CCCcceeEEee---ecEEEEccCCCC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGS-----QVLMFP----GNAYGHLHVTQ---EGTLRIQGVQKE 104 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~-----~~~~~~----~~~~~~~~~~~---~~~l~i~~~~~~ 104 (292)
+.+...+....+.+|++++|.|.+.+.|.+.+.|+|++. .+.... .....++.... ...|.|.+++.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 445556677788999999999999988888999998642 111100 01112333322 237999999999
Q ss_pred CCeEEEEEEEeCCcC-eeEEEEEEEEeecC---------CCCCeEEeCCCCceecCCCeEEEEeEeccCC--CCceEEEe
Q psy15128 105 DAGFFVCSALSVAGS-TTVRAFLQVTSVED---------TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP--PPHIRWYK 172 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~-~~~~~~l~v~~~~~---------~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~~W~~ 172 (292)
|+|.|+|.+.+..+. ......|.|..... ..++.....+....+.+|++++|.|.+.+.+ .+.+.|++
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k 172 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVR 172 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEE
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEE
Confidence 999999999886443 12223455443210 1122333345567788999999999998876 47899999
Q ss_pred CC--eeC----------------CCCCccEEEcCC-----CcEEEEeeecCCCCCC
Q psy15128 173 NG--NSL----------------PPEDTRINVSSS-----GSLQIDVLRDDFRAEP 205 (292)
Q Consensus 173 ~~--~~l----------------~~~~~~~~~~~~-----~~l~i~~~~~~d~g~~ 205 (292)
++ ..+ .....++....+ .+|.|.++..+|+|.|
T Consensus 173 ~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 228 (276)
T 3auv_A 173 QAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVY 228 (276)
T ss_dssp ECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred cCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEE
Confidence 63 211 011133333322 2688888888888844
No 222
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.73 E-value=5.4e-17 Score=121.81 Aligned_cols=128 Identities=26% Similarity=0.397 Sum_probs=93.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCC----CcEEe-CCCccEEecCCcEEEEEEEeeeCCCeeEEEE----
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAP----PSFVV-RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ---- 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~----p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~---- 72 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|... |.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 76 i~~v~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~ 154 (241)
T 3grw_A 76 MESVVPSDRGNYTCVVENKFGSIRQT-YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEV 154 (241)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCS
T ss_pred EEeCCcccCEEEEEEEeecCCceEEE-EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccC
Confidence 67899999999999999987776655 78888652 33332 3556678889999999999999999999999
Q ss_pred CCeEEeeccCCCcce------eEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 73 EGSQVLMFPGNAYGH------LHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~------~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
++..+.......... ........|.|.++..+|.|.|+|.+.|..|.......|.|..
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 155 NGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp SSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 665442111100000 0112345799999999999999999999988887777777654
No 223
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.73 E-value=2.2e-17 Score=105.71 Aligned_cols=94 Identities=23% Similarity=0.402 Sum_probs=73.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..................|.|.+++.+|+|.|+|.|.|
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 46666677788899999999999999999999999999987742221111111112234799999999999999999999
Q ss_pred CCcCeeEEEEEEEE
Q psy15128 116 VAGSTTVRAFLQVT 129 (292)
Q Consensus 116 ~~~~~~~~~~l~v~ 129 (292)
..|.....+.|.|.
T Consensus 85 ~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 85 EFGSDSATVNIHIR 98 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEE
Confidence 99988877777765
No 224
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.73 E-value=7.1e-17 Score=117.43 Aligned_cols=115 Identities=19% Similarity=0.350 Sum_probs=79.1
Q ss_pred cccCCcCCCeeEEEEEEecc-cc-cccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV-GE-RETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~-~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.|.. +. .....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|++..
T Consensus 62 i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~ 139 (198)
T 1ugn_A 62 IPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGED 139 (198)
T ss_dssp ESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC---
T ss_pred ECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCc
Confidence 77899999999999999876 42 223448888876 34444433 3678899999999999887 679999999876
Q ss_pred EeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCc
Q psy15128 77 VLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG 118 (292)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~ 118 (292)
+..................|.|.+++.+|+|.|+|.+.|..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 140 EHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp ---CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 531100000000011246899999999999999999998754
No 225
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=2.4e-17 Score=124.40 Aligned_cols=118 Identities=20% Similarity=0.289 Sum_probs=85.2
Q ss_pred cccCCcCCCeeEEEEEEecccccc----cccEEEEEeCC---CcEEe-CCCccEEecCCcEEEEEEEeeeCCCeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERE----TKPALLTVHAP---PSFVV-RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~----~~~~~l~v~~~---p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+... ...+.|.|..+ |.+.. .+....+.+|+.+.|.|.+.+.|.|.+.|+++
T Consensus 94 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~ 173 (250)
T 2fbo_J 94 LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTG 173 (250)
T ss_dssp ECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEE
T ss_pred EeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeC
Confidence 789999999999999998766432 22378888764 33333 33445667899999999999988889999998
Q ss_pred CeEEeeccCC-------------------CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 74 GSQVLMFPGN-------------------AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 74 ~~~~~~~~~~-------------------~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
+..+...... ...+........|.|.+++.+|+|.|+|.|.|..|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 174 PTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp EECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred CCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 7654221100 011122223468999999999999999999996553
No 226
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.73 E-value=7.3e-17 Score=114.96 Aligned_cols=113 Identities=16% Similarity=0.254 Sum_probs=85.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCC-CeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPL-PSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+ ...+.|.|..++..... ....+.+|+.+.|.|.+.+.++ +.+.|++++..+..
T Consensus 58 i~~~~~~d~G~Y~C~~~n~~~---s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~- 132 (175)
T 1fnl_A 58 IDAATVNDSGEYRCQTNLSTL---SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY- 132 (175)
T ss_dssp ESSCCGGGCEEEEEECSSSCC---CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-
T ss_pred EeCCCcccCEEEEEEeeCCcc---cccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-
Confidence 678999999999999987443 23378888865554433 4567889999999999987655 49999999987631
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC-eeEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS-TTVRAFLQV 128 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~-~~~~~~l~v 128 (292)
......|.|.+++.+|+|.|+|.+.|..+. .+..+.|.|
T Consensus 133 ---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 133 ---------FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp ---------EEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---------CCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEE
Confidence 233568999999999999999999996443 223344444
No 227
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.73 E-value=4.7e-17 Score=116.95 Aligned_cols=108 Identities=18% Similarity=0.261 Sum_probs=86.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+ . +.|.|.. +.. +....+.+|+.++|.|.+.+.|.+.+.|++++..+
T Consensus 72 i~~v~~~D~G~Y~C~~~~~~~----~-~~l~V~~---~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~---- 138 (184)
T 2ny1_B 72 IKNLKIEDSDTYICEVEDQKE----E-VQLLVFG---LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---- 138 (184)
T ss_dssp ECSCCGGGCEEEEEEETTEEE----E-EEEEEEE---EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE----
T ss_pred EecCCHHHCEEEEEEEEcCCC----c-EEEEEEE---ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc----
Confidence 678999999999999987654 2 5666663 222 44557889999999999988899999999987654
Q ss_pred CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 82 GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 82 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
......|.|.+++.+|+|.|+|.+.|..+.....+.|.|..
T Consensus 139 --------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 139 --------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp --------EEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred --------ccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 23466899999999999999999999877777777776654
No 228
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.73 E-value=1.4e-16 Score=122.81 Aligned_cols=133 Identities=14% Similarity=0.270 Sum_probs=83.2
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeecc---------CCCcceeEEee-----ecEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMFP---------GNAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~---------~~~~~~~~~~~-----~~~l~i~~ 100 (292)
.+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +.... .....++.... ...|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 45567889999999999998765 5789999853 11 11000 00112332222 34799999
Q ss_pred CCCCCCeEEEEEEEeCC-cCee----EEEEEEEEee-----------cCCCCCeEEeCCCCceecCCCeEEEEeEeccCC
Q psy15128 101 VQKEDAGFFVCSALSVA-GSTT----VRAFLQVTSV-----------EDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP 164 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~-~~~~----~~~~l~v~~~-----------~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 164 (292)
++.+|+|.|+|.+.+.. +... ....|.|... ...+++.+...+....+.+|++++|.|.+.+.+
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 99999999999998864 1111 1234444320 001123344445556678889999999887776
Q ss_pred CC------ceEEEeCC
Q psy15128 165 PP------HIRWYKNG 174 (292)
Q Consensus 165 ~~------~~~W~~~~ 174 (292)
.+ .+.|+|+.
T Consensus 188 ~~~~~~~~~v~W~k~~ 203 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQK 203 (291)
T ss_dssp EETTTTEECEEEEEEC
T ss_pred ccccccceeEEEEEEC
Confidence 54 78898863
No 229
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.73 E-value=6.4e-18 Score=125.27 Aligned_cols=141 Identities=14% Similarity=0.161 Sum_probs=95.5
Q ss_pred CceecCCCeEEEEeEeccCCC-----CceEEEeCCeeCC------------CCCccEEEcC------CCcEEEEeeecCC
Q psy15128 145 NQTLPLHSVAFLPCQAVGSPP-----PHIRWYKNGNSLP------------PEDTRINVSS------SGSLQIDVLRDDF 201 (292)
Q Consensus 145 ~~~~~~g~~v~l~C~~~~~p~-----~~~~W~~~~~~l~------------~~~~~~~~~~------~~~l~i~~~~~~d 201 (292)
...+.+|+.++|.|.+.+.|. +.+.|++++.... ....+..... +.+|.|.++..+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 345779999999999987653 5799999864430 1112333332 4579999999999
Q ss_pred CCCC------------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeE-cCeEeccCCCceEEe
Q psy15128 202 RAEP------------------------------KDTRVASGETALLECGPPKGQPEPTLHWKK-NGQFIDLESSKRVSI 250 (292)
Q Consensus 202 ~g~~------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~~~~~~~~~ 250 (292)
+|.| ....+.+|+.+.|.|.+..+.|.+.+.|++ ++..+..........
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~ 163 (222)
T 4i0k_A 84 EGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMA 163 (222)
T ss_dssp CSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEE
T ss_pred CEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEc
Confidence 9932 223456799999999986788999999999 565553111111211
Q ss_pred cCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 251 LGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 251 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..++. ...|.|..+..+|.|.|+|.|.|..|.+..
T Consensus 164 ~~~~~-----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 198 (222)
T 4i0k_A 164 NERGL-----FDVHSVLRVVLGANGTYSCLVRNPVLQQDA 198 (222)
T ss_dssp CTTSC-----EEEEEEEEEECCTTCEEEEEEEETTTTEEE
T ss_pred CCCCe-----EEEEEEEEEEeCCCCEEEEEEECCCCCCce
Confidence 22221 124678889999999999999999998764
No 230
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.73 E-value=6.7e-17 Score=122.00 Aligned_cols=168 Identities=13% Similarity=0.193 Sum_probs=102.9
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC-----eEEeecc----CCCcceeEEee---ecEEEEccCCCCC
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG-----SQVLMFP----GNAYGHLHVTQ---EGTLRIQGVQKED 105 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~-----~~~~~~~----~~~~~~~~~~~---~~~l~i~~~~~~d 105 (292)
.+...+....+.+|+.++|.|.+.+.|.+.+.|+|.. ..+.... .....++.... ...|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 3444566677889999999999999888899999853 1111100 01112222222 2379999999999
Q ss_pred CeEEEEEEEeCCcCe-eEEEEEEEEeec--------------CCCCCeEEeCCCCceecCCCeEEEEeEeccCC--CCce
Q psy15128 106 AGFFVCSALSVAGST-TVRAFLQVTSVE--------------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSP--PPHI 168 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~~-~~~~~l~v~~~~--------------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~ 168 (292)
+|.|.|.+.+..+.. .....|.|.... ...++.....+....+.+|++++|.|.+.+.+ .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 999999998764432 122344443210 00122233344556788999999999998876 6789
Q ss_pred EEEeC--CeeCCCC----------------CccEEEcCC-----CcEEEEeeecCCCCCC
Q psy15128 169 RWYKN--GNSLPPE----------------DTRINVSSS-----GSLQIDVLRDDFRAEP 205 (292)
Q Consensus 169 ~W~~~--~~~l~~~----------------~~~~~~~~~-----~~l~i~~~~~~d~g~~ 205 (292)
.|+++ +..+... ..++....+ .+|.|.++..+|+|.|
T Consensus 166 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 225 (250)
T 3esu_F 166 NWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVY 225 (250)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred EEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEE
Confidence 99997 4332110 122322211 1588888888888743
No 231
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.73 E-value=8.8e-17 Score=118.62 Aligned_cols=159 Identities=14% Similarity=0.195 Sum_probs=97.9
Q ss_pred CCccEEecCCcEEEEEEEe-eeC-CCeeEEEECCe--EEe--ecc-----CCCcceeEEe---eecEEEEccCCCCCCeE
Q psy15128 43 PQDQKVGLNGIASFQCVAE-GSP-LPSVFWTQEGS--QVL--MFP-----GNAYGHLHVT---QEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~-~~~-~~~v~W~~~~~--~~~--~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d~g~ 108 (292)
|....+.+|++++|.|.+. +.+ .+.+.|+|++. ... ... .....++... ....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 5567788999999999954 332 57899999542 111 100 0111233322 23389999999999999
Q ss_pred EEEEEEeCCcCe--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeCCCC-Ccc
Q psy15128 109 FVCSALSVAGST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPE-DTR 183 (292)
Q Consensus 109 Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~-~~~ 183 (292)
|+|.+.+..+.. .....|.|. ....+|.+...+.......|+.++|.|.+.+. |.+ .+.|+++|.++... ...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~--~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 164 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIK--RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQES 164 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEEC--CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEc--CCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEe
Confidence 999999876511 122344443 22234555543333334468899999999874 554 89999999988654 111
Q ss_pred --EEEcCCC------cEEEEeeecCCCC
Q psy15128 184 --INVSSSG------SLQIDVLRDDFRA 203 (292)
Q Consensus 184 --~~~~~~~------~l~i~~~~~~d~g 203 (292)
.....++ .|.|..+..+|+|
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g 192 (216)
T 2xzc_L 165 VTEQDSKDSTYSLSSTLTLSKADYEKHK 192 (216)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHTTCC
T ss_pred cCcccCCCCCEEEEEEEEECHHHhCCCC
Confidence 1111222 4666666666666
No 232
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=2.4e-17 Score=124.62 Aligned_cols=165 Identities=19% Similarity=0.235 Sum_probs=103.7
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeC-----CCeeEEEECCe--E--Eeec-----cCCCcceeEEee---ecEEEEc
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSP-----LPSVFWTQEGS--Q--VLMF-----PGNAYGHLHVTQ---EGTLRIQ 99 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~v~W~~~~~--~--~~~~-----~~~~~~~~~~~~---~~~l~i~ 99 (292)
+.+...+....+.+|++++|.|.+.+.+ .+.+.|+|++. . .... ......+..... ...|.|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 4455557778899999999999998876 57999999641 1 1110 001112333322 2389999
Q ss_pred cCCCCCCeEEEEEEEeCCcCee-EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCee
Q psy15128 100 GVQKEDAGFFVCSALSVAGSTT-VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNS 176 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~ 176 (292)
+++.+|+|.|+|.+.+..+... ....+.|.. ...+|.+...+....+..|+.++|.|.+.+. |.+ .+.|+++|..
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 192 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 192 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECC--CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeC--CCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCee
Confidence 9999999999999987654221 123444432 2234555554444444578999999999874 443 7999999998
Q ss_pred CCCC-Cc--cEEEcCCC------cEEEEeeecCCCC
Q psy15128 177 LPPE-DT--RINVSSSG------SLQIDVLRDDFRA 203 (292)
Q Consensus 177 l~~~-~~--~~~~~~~~------~l~i~~~~~~d~g 203 (292)
+... .. ......++ .|.|..+..+|+|
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 228 (252)
T 3bkj_L 193 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 228 (252)
T ss_dssp ECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCC
T ss_pred cCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCC
Confidence 7653 11 11112233 3667666666666
No 233
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=8e-17 Score=120.81 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=90.6
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeC----CCeeEEEECC--eE--Eeecc-----CCCcceeEEee---ecEEEEccCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSP----LPSVFWTQEG--SQ--VLMFP-----GNAYGHLHVTQ---EGTLRIQGVQ 102 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~----~~~v~W~~~~--~~--~~~~~-----~~~~~~~~~~~---~~~l~i~~~~ 102 (292)
+...+....+.+|+.++|.|.+.+.| .+.+.|+|+. .. ..... .....+..... ...|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 34456667889999999999998877 6789999952 21 11110 01112333322 2379999999
Q ss_pred CCCCeEEEEEEEeCCcC-eeEEEEEEEEeecCC-CCCeEEeCCCCceecCCCeEEEEeEeccCCC--CceEEEeC
Q psy15128 103 KEDAGFFVCSALSVAGS-TTVRAFLQVTSVEDT-PPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP--PHIRWYKN 173 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~-~~~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~~W~~~ 173 (292)
.+|+|.|+|.+.+..+. ......|.|...... +++.....+....+.+|+.++|.|.+.+.|. +.+.|+++
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 99999999999987543 223345555432110 2333444466677889999999999988863 58999996
No 234
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.72 E-value=9.9e-18 Score=122.96 Aligned_cols=125 Identities=22% Similarity=0.369 Sum_probs=94.0
Q ss_pred cccCCcCCCeeEEEEEEeccccc-ccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER-ETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+..+.. ....+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 72 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~ 151 (209)
T 1nbq_A 72 FKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPT 151 (209)
T ss_dssp CSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCS
T ss_pred EeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCC
Confidence 78999999999999999876522 223378888888877766667788999999999996 7889999999999876642
Q ss_pred ccCCC----cceeEE-eeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 80 FPGNA----YGHLHV-TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 80 ~~~~~----~~~~~~-~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
..... ...... ...+.|.|.+++.+|.|.|+|.+.|..|....+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v 203 (209)
T 1nbq_A 152 NPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAV 203 (209)
T ss_dssp CSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCB
T ss_pred ccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccE
Confidence 22110 011111 134589999999999999999999998887444333
No 235
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.72 E-value=2.3e-16 Score=116.84 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=101.7
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeec-----------cCCCcceeEEee-----ecEEEEc
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMF-----------PGNAYGHLHVTQ-----EGTLRIQ 99 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~-----------~~~~~~~~~~~~-----~~~l~i~ 99 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +... ......+..... ...|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 3456788999999999998754 6789999853 11 1100 001123444332 3489999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEe
Q psy15128 100 GVQKEDAGFFVCSALSVAG-----STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYK 172 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~ 172 (292)
+++.+|+|.|.|.+.+..+ .......|.|.... ..+|.+...+....+..|+.++|.|.+.+. |.| .+.|++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC-CBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC-CCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEec
Confidence 9999999999999988653 11223455554321 223444433333346689999999999885 877 999999
Q ss_pred CCeeCCCCCccEEEcCC------CcEEEEeeecCCCCCCcceE
Q psy15128 173 NGNSLPPEDTRINVSSS------GSLQIDVLRDDFRAEPKDTR 209 (292)
Q Consensus 173 ~~~~l~~~~~~~~~~~~------~~l~i~~~~~~d~g~~~~~~ 209 (292)
+|..+...... ....+ ..|.|..+..+| |.|....
T Consensus 166 ~g~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a 206 (222)
T 1q9r_B 166 GSLSSGVHTFP-AVLQSDLYTLSSSVTVPSSTWPS-ETVTCNV 206 (222)
T ss_dssp GTBCTTEEEEE-EEEETTEEEEEEEEEEETTTTTT-SCCEEEE
T ss_pred CCeEcceEecc-ccccCCcEEEEEEEEECchhcCC-CeEEEEE
Confidence 98776431100 11112 246666666666 7654433
No 236
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.72 E-value=3.6e-17 Score=121.18 Aligned_cols=123 Identities=20% Similarity=0.265 Sum_probs=83.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC-CeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE-GSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~-~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+ .+..... +.|.|..++..........+.+|+.+.|.|.+.|.|.+.+.|+++ +..+...
T Consensus 84 I~~v~~~D~G~Y~C~~~~-~~~~~~~-~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~ 161 (222)
T 3sbw_C 84 ITDVKLQDAGVYRCMISY-GGADYKR-ITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGK 161 (222)
T ss_dssp ESSCCGGGCEEEEEEEES-SSEEEEE-EEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCE
T ss_pred EcCcccccCeEEEEEEEe-CCCceeE-EEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCc
Confidence 789999999999999998 4444444 888888766533222223567899999999999999999999998 4333110
Q ss_pred cCCCcceeEEeeec---EEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEG---TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~~~~~~---~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
. ........++ ...+..+...|.|.|+|.|.|..+.....+.+.|.
T Consensus 162 ~---~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 162 T---TTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp E---EEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred c---ceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 0 0000011111 11222345689999999999999988887777664
No 237
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.72 E-value=7.7e-18 Score=125.79 Aligned_cols=167 Identities=13% Similarity=0.170 Sum_probs=87.1
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCe--EE--eec-----cCCCcceeE---EeeecEEEEccCCCC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGS--QV--LMF-----PGNAYGHLH---VTQEGTLRIQGVQKE 104 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~--~~--~~~-----~~~~~~~~~---~~~~~~l~i~~~~~~ 104 (292)
+.+...+....+.+|++++|.|.+.+.+.+.+.|+|++. .. ... ......+.. ......|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 445555777789999999999999888778899998532 11 110 000011121 223347999999999
Q ss_pred CCeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeCCCC-
Q psy15128 105 DAGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPE- 180 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~- 180 (292)
|+|.|.|.+.+..+.. .....+.|.. ...+|.+...+.......|+.++|.|.+.+. |.+ .+.|+++|.++...
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~ 181 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 181 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---C--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCE
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeC--CCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCc
Confidence 9999999998765422 1122344432 1224555554444344579999999999875 443 69999999887653
Q ss_pred CccE--EEcCCC------cEEEEeeecCCCCCC
Q psy15128 181 DTRI--NVSSSG------SLQIDVLRDDFRAEP 205 (292)
Q Consensus 181 ~~~~--~~~~~~------~l~i~~~~~~d~g~~ 205 (292)
.... ....++ .|.|..+..+|+|.|
T Consensus 182 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y 214 (233)
T 3bqu_C 182 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSY 214 (233)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCE
T ss_pred eEecCCccCCCCCEEEEEEEEECHHHhCCCCCE
Confidence 1101 111222 356666666676644
No 238
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.72 E-value=3.4e-17 Score=120.55 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=87.8
Q ss_pred cccCCcCCCeeEEEEEEeccc--ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee-CC-CeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG--ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS-PL-PSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |+ +.+.|+++
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 153 (213)
T 3mj8_L 74 ISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEAD 153 (213)
T ss_dssp ESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred ECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcC
Confidence 789999999999999999877 233444888888 67777776666656689999999999885 43 48999999
Q ss_pred CeEEeeccCCCc---ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 74 GSQVLMFPGNAY---GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 74 ~~~~~~~~~~~~---~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+..+........ ........+.|.|.++..+|.|.|+|.|.|..+..
T Consensus 154 g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3mj8_L 154 GTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTV 203 (213)
T ss_dssp TEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEE
T ss_pred CcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccE
Confidence 987632100000 11112234569999999999999999999986543
No 239
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.72 E-value=1.1e-16 Score=119.26 Aligned_cols=128 Identities=23% Similarity=0.362 Sum_probs=94.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC----cEEe-CCCccEEecCCcEEEEEEEeeeCCCeeEEEE----
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP----SFVV-RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQ---- 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p----~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~---- 72 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|...+ .+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 80 i~~~~~~d~G~Y~C~~~n~~~~~~~~-~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~ 158 (231)
T 3ojm_B 80 MESVVPSDKGNYTCVVENEYGSINHT-YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEK 158 (231)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCB
T ss_pred EecCCcccCEEEEEEEecccCccccc-EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCC
Confidence 67899999999999999987776555 788887532 2222 2456778899999999999999999999999
Q ss_pred CCeEEeeccCCCccee-----EEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 73 EGSQVLMFPGNAYGHL-----HVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
++..+........... .....+.|.|.++..+|+|.|+|.+.|..|.......|.|..
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 159 NGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp TTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 6554421111000000 011234799999999999999999999998887777777764
No 240
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.72 E-value=1.5e-16 Score=120.39 Aligned_cols=158 Identities=16% Similarity=0.233 Sum_probs=103.1
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--CCeeEEEEC--CeEEe--ec-c---------CCCcceeEEee-----ecEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQE--GSQVL--MF-P---------GNAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~--~~~~~--~~-~---------~~~~~~~~~~~-----~~~l~i~~ 100 (292)
.|....+.+|++++|.|.+.+.| .+.+.|+|+ +.... .. . .....+..... ...|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 34567788999999999998764 578999984 22221 10 0 00123333332 24899999
Q ss_pred CCCCCCeEEEEEEEeCCcC---ee--EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCC-----ceEE
Q psy15128 101 VQKEDAGFFVCSALSVAGS---TT--VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPP-----HIRW 170 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~---~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-----~~~W 170 (292)
++.+|+|.|+|.+.+..+. .. ....|.|. +++.+...+....+.+|++++|.|.+.+.|.+ .+.|
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~-----~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W 160 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS-----SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEW 160 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC-----CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeec-----ccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEE
Confidence 9999999999999987552 11 22344443 23445555666678999999999999888765 8999
Q ss_pred Ee--CCeeCC-----------CCCccEEEc---CCCcEEEEeeecCCCCC
Q psy15128 171 YK--NGNSLP-----------PEDTRINVS---SSGSLQIDVLRDDFRAE 204 (292)
Q Consensus 171 ~~--~~~~l~-----------~~~~~~~~~---~~~~l~i~~~~~~d~g~ 204 (292)
+| ++..+. ....++... ...+|.|.++..+|+|.
T Consensus 161 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 210 (256)
T 1nqb_A 161 YLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGV 210 (256)
T ss_dssp EEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEE
Confidence 99 554331 001233221 22368888888888773
No 241
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.71 E-value=4.8e-17 Score=119.49 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=86.0
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++..
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 153 (210)
T 1lk3_L 74 IDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTE 153 (210)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred ECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCcc
Confidence 7899999999999999987665444446788875 5666654444445579999999999874 443 8999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
+... .............+.|.|.++..+|+|.|+|.+.|........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (210)
T 1lk3_L 154 RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVV 205 (210)
T ss_dssp CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEE
T ss_pred CCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCeee
Confidence 5321 0000111112233579999999999999999999876654433
No 242
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.71 E-value=1.3e-16 Score=120.17 Aligned_cols=141 Identities=20% Similarity=0.304 Sum_probs=92.5
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC----e-EEee---------ccCCCcceeEEee----ecEEEEcc
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG----S-QVLM---------FPGNAYGHLHVTQ----EGTLRIQG 100 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~----~-~~~~---------~~~~~~~~~~~~~----~~~l~i~~ 100 (292)
+...+....+.+|++++|.|.+.+.+.+.+.|+|.. . .+.. .......+..... ...|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 444566678899999999999988888899999821 0 1100 1111113333322 34799999
Q ss_pred CCCCCCeEEEEEEEeCCcC----eeEEEEEEEEeec-CCCCCe-EEeCCCCceecCCCeEEEEeEeccCCCC--ceEEEe
Q psy15128 101 VQKEDAGFFVCSALSVAGS----TTVRAFLQVTSVE-DTPPPI-VQVGPSNQTLPLHSVAFLPCQAVGSPPP--HIRWYK 172 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~----~~~~~~l~v~~~~-~~~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~~~W~~ 172 (292)
++.+|+|.|+|.+.+..+. ......+.|.... ...+|. ....+....+.+|+.++|.|.+.+.|++ .+.|++
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 163 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 163 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE
Confidence 9999999999999865331 1123345554211 112333 3344555556679999999999887554 799999
Q ss_pred CCeeCCC
Q psy15128 173 NGNSLPP 179 (292)
Q Consensus 173 ~~~~l~~ 179 (292)
+|..+..
T Consensus 164 ~g~~l~~ 170 (246)
T 4dzb_B 164 NGKEVHS 170 (246)
T ss_dssp TTEEECT
T ss_pred CCEECCC
Confidence 9998865
No 243
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.71 E-value=1.6e-16 Score=116.53 Aligned_cols=112 Identities=18% Similarity=0.334 Sum_probs=85.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCC---CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAP---PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+ |.+...+.. +.+|+.+.|.|.+.+.| +.+.|++++..+.
T Consensus 75 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~ 151 (208)
T 3r4d_A 75 FQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQ 151 (208)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECC
T ss_pred EccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCC
Confidence 67899999999999999885444444478888765 444444433 88899999999998865 7999999998763
Q ss_pred eccCCCcceeEEe-eecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 79 MFPGNAYGHLHVT-QEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
. ..+.... .+..|.|.++..+|.|.|+|.+.|..|...
T Consensus 152 ~-----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 190 (208)
T 3r4d_A 152 L-----TERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRR 190 (208)
T ss_dssp C-----CSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEE
T ss_pred C-----CCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCccc
Confidence 1 1122222 236899999999999999999999888754
No 244
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.71 E-value=4.5e-17 Score=119.88 Aligned_cols=123 Identities=20% Similarity=0.247 Sum_probs=87.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+.......|+.++|.|.+.+ .|.+ .+.|++++..
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 154 (213)
T 3d9a_L 75 INSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 154 (213)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred ECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCc
Confidence 7899999999999999987765444446788875 666666554444557999999999987 5554 8999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEE
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA 124 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~ 124 (292)
+... .........+...+.|.|.++..+|.|.|+|.|.|.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3d9a_L 155 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK 207 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEE
T ss_pred CcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEE
Confidence 6321 00000111122345899999999999999999999876544333
No 245
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.71 E-value=1.5e-16 Score=103.10 Aligned_cols=93 Identities=29% Similarity=0.483 Sum_probs=74.4
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.|.|+|++..+.. +.............|.|.+++.+|+|.|+|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA--SERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC--CSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccc--eeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 367788888889999999999999999999999999999987632 111111111223479999999999999999999
Q ss_pred eCCcCeeEEEEEEEE
Q psy15128 115 SVAGSTTVRAFLQVT 129 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~ 129 (292)
|..|.....+.|.|.
T Consensus 90 N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 90 NAAGEAYAAAAVTVL 104 (107)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEE
Confidence 999988877777775
No 246
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.71 E-value=2.2e-17 Score=122.74 Aligned_cols=122 Identities=20% Similarity=0.207 Sum_probs=80.4
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEee-eCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEG-SPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.|..+..... +.+.+.. ..........+.+|+.+.|.|.+.+ .|.|.|.|++++..+...
T Consensus 87 I~~v~~~D~G~Y~C~a~n~~~~~~~~-v~~~~~~--~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~ 163 (226)
T 4f80_A 87 IHNVTASDSGKYLCYFQDGDFYEKAL-VELKVAA--LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPT 163 (226)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEB--CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCC
T ss_pred EeeCchHHCeeEEEEEECCCcEEEEE-EEEeecc--ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCC
Confidence 78999999999999999977665433 4444433 3333334556788999999999988 589999999976543211
Q ss_pred cCCCcceeEEeeec---EEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEG---TLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~~~~~~---~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.. .......++ .+.+..++.+|.|.|+|.|.|..+.....+.|.|.
T Consensus 164 ~~---~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 164 VE---APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EE---CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred Cc---eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 11 111111122 34455677899999999999999988877776653
No 247
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.71 E-value=7e-17 Score=123.18 Aligned_cols=186 Identities=17% Similarity=0.223 Sum_probs=80.2
Q ss_pred eCCCccEEecCCcEEEEEEEeeeCCC-eeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGSPLP-SVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
+.|....+.+|+++.|+|.+.. +.+ .+.|.-.-...... ........+.+.+++.+ +.|.|.+......
T Consensus 4 v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~-------~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~ 73 (291)
T 1mq8_A 4 VSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELL-------LPGNNRKVYELSNVQED--SQPMCYSNCPDGQ 73 (291)
T ss_dssp EECSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCC-------CSCSSEEEEEEESCCSC--CCCEEEEECSSCE
T ss_pred EeCCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccc-------cCCCceEEEEEEecccC--CeEEEEEEcCCcc
Confidence 4455677899999999999964 444 48885421111000 00111235778888743 4699999754333
Q ss_pred eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC--ceEEEeCCeeCCCCCc-------cEEE---
Q psy15128 120 TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP--HIRWYKNGNSLPPEDT-------RINV--- 186 (292)
Q Consensus 120 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~--~~~W~~~~~~l~~~~~-------~~~~--- 186 (292)
....+.+.|.. +|..+.+.+....+.+|+.++|.|.+.+. |.. .|+|+|++.++..... .+.+
T Consensus 74 ~~~~v~l~V~~----~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~ 149 (291)
T 1mq8_A 74 STAKTFLTVYW----TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVR 149 (291)
T ss_dssp EEEECEEEECB----CCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCS
T ss_pred EEEEEEEEEec----CCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeee
Confidence 33344444442 23333333344558899999999999766 444 4899999987653210 0000
Q ss_pred --cCCCcEEEEeeecCCC-C-----------------CC-c------ceEEeCCCceEEEeeCCCCCCCC---eEEEeEc
Q psy15128 187 --SSSGSLQIDVLRDDFR-A-----------------EP-K------DTRVASGETALLECGPPKGQPEP---TLHWKKN 236 (292)
Q Consensus 187 --~~~~~l~i~~~~~~d~-g-----------------~~-~------~~~~~~g~~~~l~C~~~~~~p~~---~~~W~~~ 236 (292)
...+.|.+..-..-.. | .| . ...+.+|+.++|+|.+ .|.|++ .++|+++
T Consensus 150 ~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~-~g~~P~~~~~v~w~~~ 228 (291)
T 1mq8_A 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSL-DGLFPVSEAQVHLALG 228 (291)
T ss_dssp SSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------------------------
T ss_pred eccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEc-CCCCCCcccEEEEEEC
Confidence 0111333322111000 1 10 0 0135689999999998 775443 6999999
Q ss_pred CeEec
Q psy15128 237 GQFID 241 (292)
Q Consensus 237 g~~~~ 241 (292)
|+.+.
T Consensus 229 g~~l~ 233 (291)
T 1mq8_A 229 DQRLN 233 (291)
T ss_dssp -----
T ss_pred CEecC
Confidence 99885
No 248
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.71 E-value=5.7e-16 Score=114.97 Aligned_cols=169 Identities=14% Similarity=0.198 Sum_probs=103.4
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEE--ee-c---------cCCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQV--LM-F---------PGNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~--~~-~---------~~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ... .. . ......++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456788999999999998765 6789999853 211 10 0 001123444332 358999999
Q ss_pred CCCCCeEEEEEEEeCCc-----C---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEE
Q psy15128 102 QKEDAGFFVCSALSVAG-----S---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWY 171 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~-----~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~ 171 (292)
+.+|+|.|.|.+.+..+ . ......|.|......+|.+....+.. .+..|+.++|.|.+.+. |.+ .+.|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 99999999999998653 1 11234555553211222233334333 35689999999999876 666 89999
Q ss_pred eCCeeCCCC-CccEEEcCCC------cEEEEeeecCCCCCCcceEEeCCC
Q psy15128 172 KNGNSLPPE-DTRINVSSSG------SLQIDVLRDDFRAEPKDTRVASGE 214 (292)
Q Consensus 172 ~~~~~l~~~-~~~~~~~~~~------~l~i~~~~~~d~g~~~~~~~~~g~ 214 (292)
+++..+... .... ...++ .|.|..+..+| |.|.......+.
T Consensus 166 ~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 166 SGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp TTSCCTTCEECCCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred cCCCcCCeEecCce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 998764211 0111 12333 36666666666 766554444333
No 249
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.71 E-value=6.2e-17 Score=119.54 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=91.3
Q ss_pred CCcEEeCCCccE--EecCCcEEEEEEEeee---CC-CeeEEEECCeEEeeccCC---CcceeEEeeecEEEEccCCCCCC
Q psy15128 36 PPSFVVRPQDQK--VGLNGIASFQCVAEGS---PL-PSVFWTQEGSQVLMFPGN---AYGHLHVTQEGTLRIQGVQKEDA 106 (292)
Q Consensus 36 ~p~~~~~~~~~~--~~~g~~~~l~C~~~~~---~~-~~v~W~~~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~ 106 (292)
+|.+.+.+.... +.+|++++|.|.+.+. |. +.|.|+|++..+...... ......+...+.|.|.+++.+|+
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 88 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSG 88 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCC
Confidence 455544444444 7889999999999887 33 689999999765311100 00001122345799999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCeeCC
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNSLP 178 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~l~ 178 (292)
|.|+|.+.+..+.......+... .....+|.+.+.+.......|+.++|.|.+.+ +|.+ .+.|+++|.++.
T Consensus 89 g~Y~C~~~~~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 89 KEFKCKVNNKDLPSPIERTISKI-KGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp CCEEEEEEETTCSSCEEEEECCC-CCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CeEEEEEECCcCCCcceEEEeec-CCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 99999999876644222222110 11123445544333333346999999999988 5665 899999998764
No 250
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=1.1e-16 Score=115.40 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=80.8
Q ss_pred cccCCcCCCeeEEEEEEecccc-cccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE-RETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQV 77 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~ 77 (292)
|.+++++|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|++..+
T Consensus 61 I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 138 (188)
T 1oll_A 61 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSS 138 (188)
T ss_dssp ESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSC
T ss_pred eCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccc
Confidence 6789999999999999886443 223447888864 45555444 456889999999999865 45689999998755
Q ss_pred eeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 78 LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.. ........+.|.|.+++.+|+|.|+|.+.+..
T Consensus 139 ~~------~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 139 HV------QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EE------EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred cc------cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 32 11122345689999999999999999998753
No 251
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.71 E-value=1.3e-16 Score=117.67 Aligned_cols=128 Identities=19% Similarity=0.219 Sum_probs=93.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc-EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS-FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+........+.+..++. .........+..|+.+.+.|.+.+.|.+.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 6799999999999999887665554435555555443 333445556677899999999999999999999998766422
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
..... .......+.|.|.++..+|.|.|+|.|.|..+.....+.+.+.+
T Consensus 163 ~~~~~-~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 163 RSFKH-SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp EEEEC-SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCE
T ss_pred ceEec-CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEE
Confidence 11111 11122345799999999999999999999998877777766654
No 252
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.71 E-value=1e-16 Score=117.42 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=86.5
Q ss_pred EecCCcEEEEEEEeeeC----CCeeEEEECCeEEeeccC---CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 48 VGLNGIASFQCVAEGSP----LPSVFWTQEGSQVLMFPG---NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 48 ~~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+.+|++++|.|.+.+.+ ...+.|+|++..+..... .......+...+.|.|.+++.+|+|.|+|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 78899999999998874 248999999976531110 00000112234579999999999999999999887754
Q ss_pred eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCC
Q psy15128 121 TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPP 179 (292)
Q Consensus 121 ~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~ 179 (292)
.....+.+. .....+|.+.+.+.......|+.+.|.|.+.+. |+ +.+.|+++|.++..
T Consensus 95 ~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 154 (207)
T 2vol_A 95 PIEKTISKT-KGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAEN 154 (207)
T ss_dssp CEEEEECCC-CCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSC
T ss_pred ceEEEeccC-CCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccC
Confidence 333333221 011224555444333333469999999999885 44 38999999988743
No 253
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.71 E-value=8.7e-17 Score=122.66 Aligned_cols=143 Identities=22% Similarity=0.366 Sum_probs=85.6
Q ss_pred cccCCcCCCeeEEEEEEecccccc-cccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEE---eeeCCCeeEEEECCeE-
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERE-TKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVA---EGSPLPSVFWTQEGSQ- 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~v~W~~~~~~- 76 (292)
|.+++.+|+|.|+|.+.+..+... ...+.|.|.. ..+....+.+|+.++|.|.+ .+.|.+.+.|++++..
T Consensus 88 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~ 162 (268)
T 3mj6_A 88 LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSH 162 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTC
T ss_pred ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCC
Confidence 789999999999999998654432 2225555542 13446678899999999999 4568889999994321
Q ss_pred -----Ee-e----------ccCCCcceeEE-----eeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCC
Q psy15128 77 -----VL-M----------FPGNAYGHLHV-----TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTP 135 (292)
Q Consensus 77 -----~~-~----------~~~~~~~~~~~-----~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 135 (292)
.. . .......+... .....|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----~ 238 (268)
T 3mj6_A 163 TEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ----D 238 (268)
T ss_dssp SSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----C
T ss_pred CcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc----C
Confidence 10 0 00011111111 2355899999999999999999999877766666666642 2
Q ss_pred CCeEEeCCCCceecCCCe
Q psy15128 136 PPIVQVGPSNQTLPLHSV 153 (292)
Q Consensus 136 ~~~~~~~~~~~~~~~g~~ 153 (292)
+|.+...|....+..|+.
T Consensus 239 ~p~~~~~p~~~~~~~~q~ 256 (268)
T 3mj6_A 239 EFQRTISPTPPTDKGQQG 256 (268)
T ss_dssp ------------------
T ss_pred CCeeeeCCCCCCCCccee
Confidence 444444455554544443
No 254
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.70 E-value=4.2e-16 Score=114.78 Aligned_cols=154 Identities=19% Similarity=0.240 Sum_probs=100.7
Q ss_pred CCCccEEecCCcEEEEEEEeee-------CCCeeEEEECCeEE----eec-c-------CCCcceeEEee-----ecEEE
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGS-------PLPSVFWTQEGSQV----LMF-P-------GNAYGHLHVTQ-----EGTLR 97 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~-------~~~~v~W~~~~~~~----~~~-~-------~~~~~~~~~~~-----~~~l~ 97 (292)
.+..+.+.+|++++|.|.+.+. +.+.+.|+|++... ... . .....+..... +..|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 4556788899999999998754 46689999986521 010 0 11123333322 33799
Q ss_pred EccCCCCCCeEEEEEEEeCCcCee----EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC----CCCceE
Q psy15128 98 IQGVQKEDAGFFVCSALSVAGSTT----VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS----PPPHIR 169 (292)
Q Consensus 98 i~~~~~~d~g~Y~C~~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~----p~~~~~ 169 (292)
|.+++.+|+|.|.|.+.+..+... ....|.|.. ....|.+.. +. .+.+|+.++|.|.+.+. |.|.+.
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~--~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA--LIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC--CCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec--CCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEE
Confidence 999999999999999998652211 234455543 222344433 22 26789999999999764 788999
Q ss_pred EEeCCeeCCCCCccEEEcCCCcEEEEeeecCCCCC
Q psy15128 170 WYKNGNSLPPEDTRINVSSSGSLQIDVLRDDFRAE 204 (292)
Q Consensus 170 W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~g~ 204 (292)
|++++..+... . ....+.|.|..+..+|.|.
T Consensus 161 W~~~~~~~~~~--~--~~~~~~L~i~~~~~~~~g~ 191 (214)
T 2zg1_A 161 WTGNALSPLDP--E--TTRSSELTLTPRPEDHGTN 191 (214)
T ss_dssp EESSTTSSSCS--S--CCCSSEEEECCCTTCCSCE
T ss_pred EeCCCCccCCC--C--ceeEEEEEEecccHHcCcE
Confidence 99998654321 1 1345678888877777663
No 255
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.70 E-value=2.4e-17 Score=120.35 Aligned_cols=138 Identities=12% Similarity=0.228 Sum_probs=91.9
Q ss_pred ecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 49 GLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 49 ~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
.+|+.++|.|.+ |.+.+.|+|++..+... ....+.|.|.+++.+|+|.|+|.+.+.. .. ...+.+
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~---------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s~--~~~v~v 80 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL---------TEDKKKWNLGSNAKDPRGMYQCKGSQNK-SK--PLQVYY 80 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE---------ESSCCCEEEEEGGGCCEEEEEEESSSSC-CC--CEEEEE
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC---------CCCCCeEEeCCCCcCCCEEEEEEecCCC-Ce--eEEEEE
Confidence 579999999998 77899999999876421 1134579999999999999999965432 11 122332
Q ss_pred Ee------e-------------------c-CCCCCeEEeCCCCceec-CCCeEEEEeEeccCCCCceEEEeCCeeCCCCC
Q psy15128 129 TS------V-------------------E-DTPPPIVQVGPSNQTLP-LHSVAFLPCQAVGSPPPHIRWYKNGNSLPPED 181 (292)
Q Consensus 129 ~~------~-------------------~-~~~~~~~~~~~~~~~~~-~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~ 181 (292)
.. . . ...++.+. ... ..+. +|+.++|.|. +.|.|.+.|++++..+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~ 156 (204)
T 1sy6_A 81 RMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGIT-QTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDE 156 (204)
T ss_dssp EC-------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCT
T ss_pred EEecccccccccccccccccccccccccccccccccee-cCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCcc
Confidence 20 0 0 00011121 112 2344 8999999998 77888999999999876532
Q ss_pred -ccEEEcCCCcEEEEee-ecCCCCCC
Q psy15128 182 -TRINVSSSGSLQIDVL-RDDFRAEP 205 (292)
Q Consensus 182 -~~~~~~~~~~l~i~~~-~~~d~g~~ 205 (292)
........+.|.|.++ ..+|+|.|
T Consensus 157 ~~~~~~~~~~~L~I~~v~~~~D~G~Y 182 (204)
T 1sy6_A 157 DDKNIGSDEDHLSLKEFSELEQSGYY 182 (204)
T ss_dssp TCTTEEEETTEEEETTCCHHHHCEEE
T ss_pred CCceEecCCCEEEEeeCCccccCEEE
Confidence 2222234778999999 99898844
No 256
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.70 E-value=4.9e-17 Score=115.82 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=80.0
Q ss_pred CcccCCcCCCeeEEEEEEeccccc-ccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEee
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGER-ETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLM 79 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~ 79 (292)
.|.+++++|+|.|+|.+.|..+.. ....+.|.|..++. .+.....+..+.|.|.+.+.|.+.+.|++++..+..
T Consensus 64 ~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~-----~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~ 138 (176)
T 1hng_A 64 KIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVS-----KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRS 138 (176)
T ss_dssp EESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCC-----CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEE
T ss_pred EEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCC-----CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCC
Confidence 378999999999999999988775 23337788876432 111123345699999999999999999999987642
Q ss_pred ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 80 FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
. ..+.|..+..+|.|.|+|.|.|..|.......|
T Consensus 139 ~-------------~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 139 L-------------RQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp E-------------SSSEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred C-------------CcEEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 1 124455777999999999999998876655544
No 257
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.70 E-value=5.7e-16 Score=114.16 Aligned_cols=90 Identities=14% Similarity=0.271 Sum_probs=68.7
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+ ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .+.... ..+.|.|.++..+|.|.|+|.
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNY---SNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSS---CSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCC---ccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 3444 466667888999999999999999999999999987642211 122222 256899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~ 129 (292)
+.|..|.......+.+.
T Consensus 95 a~n~~g~~~~~~~l~v~ 111 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQA 111 (215)
T ss_dssp EECSSCEEEEEEEEEEC
T ss_pred EEECCCceEEEEEEEEC
Confidence 99998877666555543
No 258
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.70 E-value=7.9e-17 Score=114.91 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=84.4
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+. ..+.|.|..++... .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+..
T Consensus 55 i~~v~~~d~G~Y~C~~~~~~~s---~~~~l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~- 129 (176)
T 1f2q_A 55 IVNAKFEDSGEYKCQHQQVNES---EPVYLEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY- 129 (176)
T ss_dssp ECSCCGGGCEEEEEECTTSSCC---CCEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS-
T ss_pred EeccceecCEEEEEEcCCcccc---ccEEEEEeCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee-
Confidence 6789999999999999875432 33788888554443 33446788999999999995 566679999999987621
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC-eeEEEEEEEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS-TTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~-~~~~~~l~v~ 129 (292)
......|.|.+++.+|+|.|+|.+.|..+. ....+.|.|.
T Consensus 130 ---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 130 ---------WYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp ---------CCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ---------ecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 122468999999999999999999986332 2333455554
No 259
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.70 E-value=2.4e-17 Score=105.54 Aligned_cols=80 Identities=18% Similarity=0.294 Sum_probs=66.2
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+.+..+.+|+.+.|.|.+ .|.|.|.+.|+++|++|......++.+...+. ...|.|..+..+|+|.|+|.|+|.
T Consensus 12 p~~~~v~~G~~~~l~C~~-~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD-----LTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp CSEEEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEEECSS-----EEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEeCCCeEEEEEEE-EEecCCEEEEEECceEeeeeccceeeeecccc-----eEEEEEcCCCccCCEEEEEEEEEC
Confidence 457789999999999998 89999999999999999755555555543322 236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
+|+++.
T Consensus 86 ~G~~~~ 91 (100)
T 3knb_A 86 FGSDSA 91 (100)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 998764
No 260
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.70 E-value=1.5e-16 Score=117.80 Aligned_cols=158 Identities=18% Similarity=0.267 Sum_probs=99.9
Q ss_pred ccEEecCCcEEEEEEEeeeCC-----CeeEEEECCeEEee--ccC------CCcceeEEee------ecEEEEccCCCCC
Q psy15128 45 DQKVGLNGIASFQCVAEGSPL-----PSVFWTQEGSQVLM--FPG------NAYGHLHVTQ------EGTLRIQGVQKED 105 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~~-----~~v~W~~~~~~~~~--~~~------~~~~~~~~~~------~~~l~i~~~~~~d 105 (292)
.+.+.+|++++|.|.+.+.+. +.+.|++++..... ... ....+..+.. +..|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456788999999999987653 58999997643211 000 1112222222 4579999999999
Q ss_pred CeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEe-ccCCCCceEEEe-CCeeCCCCCc-
Q psy15128 106 AGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQA-VGSPPPHIRWYK-NGNSLPPEDT- 182 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~~W~~-~~~~l~~~~~- 182 (292)
+|.|+|.+.+.. .......|.|. .....|.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|++ ++..+.....
T Consensus 84 ~G~Y~C~~~~~~-~~~~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~ 159 (222)
T 4i0k_A 84 EGSYTCFVSIQD-FDSAAVSLQVA--APYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTT 159 (222)
T ss_dssp CSCEEEEEEECC-CCCCCCCCCCC--BCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEE
T ss_pred CEEEEEEEEeCC-CceEEEEEEEE--cCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcce
Confidence 999999999753 33333344433 223345555444 3457789999999999 788999999999 4555443211
Q ss_pred cEEEcCCCc---EEEEeeecCCCCCCc
Q psy15128 183 RINVSSSGS---LQIDVLRDDFRAEPK 206 (292)
Q Consensus 183 ~~~~~~~~~---l~i~~~~~~d~g~~~ 206 (292)
......++. |.|.++..+|.|.|.
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 186 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTYS 186 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEEE
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEEE
Confidence 112223343 688888888888543
No 261
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.70 E-value=3.9e-17 Score=119.23 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=86.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP 81 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~ 81 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..++...... ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..
T Consensus 71 I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~l~V~~~~~~p~~~-~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~-- 146 (202)
T 3bp6_B 71 IPSVQVRDSGQYRCLVICGAAWDYKY-LTVKVKASYMRIDTR-ILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT-- 146 (202)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEBCCCCEEEE-EEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--
T ss_pred ECCCCHHHCcEEEEEEEeCCCcceEE-EEEEecCCCCcccEE-EEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--
Confidence 77999999999999999987766444 888888754221110 11345799999999999999999999997764321
Q ss_pred CCCcceeEEee---ecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 82 GNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 82 ~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
...... ...+.+..+..+|.|.|+|.|.|..+.......+.+.
T Consensus 147 -----~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 147 -----SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp -----EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred -----ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 011111 1356677888999999999999999988777766554
No 262
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.70 E-value=1.5e-16 Score=117.05 Aligned_cols=113 Identities=16% Similarity=0.258 Sum_probs=83.1
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEee-eCCCeeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEG-SPLPSVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...+....+.+|+.++|.|.+.+ .|.+.+.|++++.
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~ 154 (213)
T 3nl4_L 75 ISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGT 154 (213)
T ss_dssp ECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTE
T ss_pred ECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCc
Confidence 7899999999999999987663 33333677773 4566665555555667999999999988 7888999999998
Q ss_pred EEeecc-----CCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 76 QVLMFP-----GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 76 ~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+.... ........+...+.|.|.++..+|.|.|+|.|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 155 TQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp ECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 763110 001111223334679999999999999999998
No 263
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.69 E-value=2.1e-16 Score=116.29 Aligned_cols=122 Identities=16% Similarity=0.218 Sum_probs=87.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEE---eCCCcEEeCCCccEEecCCcEEEEEEEeeeCC--CeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTV---HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPL--PSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.| ..+|.+...+....+..|+.++|.|.+.+.++ +.+.|++++..
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~ 154 (213)
T 3r06_A 75 ISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSE 154 (213)
T ss_dssp ESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred ECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcc
Confidence 78999999999999998876544444478888 56677776666666667889999999988654 38999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
+... .........+.....|.|.....+|.|.|+|.+.|........
T Consensus 155 l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~ 206 (213)
T 3r06_A 155 KRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIV 206 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE
T ss_pred cCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceE
Confidence 6321 0011111122334578899998999999999999976554433
No 264
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.69 E-value=7.8e-16 Score=113.00 Aligned_cols=162 Identities=17% Similarity=0.194 Sum_probs=99.5
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe---eccC--------CCcceeEEee-----ecEEEEccCC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL---MFPG--------NAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~---~~~~--------~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|+. .... .... ....+..... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4456788999999999998764 4789999852 2211 1000 0112333322 2389999999
Q ss_pred CCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeCCCC
Q psy15128 103 KEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSLPPE 180 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l~~~ 180 (292)
.+|+|.|+|.+.+.. .......+.|.... ..+|.+...+....+..|+.++|.|.+.+. |.| .+.|++++..+...
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~ 164 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 164 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCC-CBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCC-CCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceE
Confidence 999999999998753 11222445554321 223444433333456789999999999887 777 89999998764311
Q ss_pred -CccEEEc----CCCcEEEEeeecCCCCCCcc
Q psy15128 181 -DTRINVS----SSGSLQIDVLRDDFRAEPKD 207 (292)
Q Consensus 181 -~~~~~~~----~~~~l~i~~~~~~d~g~~~~ 207 (292)
....... ....|.|..+..+| |.|..
T Consensus 165 ~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C 195 (210)
T 3d9a_H 165 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTC 195 (210)
T ss_dssp ECCCEEETTEEEEEEEEEEEGGGTTT-SCCEE
T ss_pred EcCCccCCCcEEEEEEEEEcHHHcCC-CcEEE
Confidence 1111111 11246676666655 75543
No 265
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.69 E-value=2.5e-16 Score=116.17 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=84.3
Q ss_pred cccCCcCCCeeEEEEEEeccc-ccccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-ERETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...+.......|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 76 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 155 (216)
T 2xzc_L 76 ITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNA 155 (216)
T ss_dssp ECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCe
Confidence 789999999999999998765 222333677776 35666554433334468899999999884 554 899999998
Q ss_pred EEeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEE
Q psy15128 76 QVLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA 124 (292)
Q Consensus 76 ~~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~ 124 (292)
.+... .........+...+.|.|..+..+|.|.|+|.+.|.........
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 209 (216)
T 2xzc_L 156 LQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 209 (216)
T ss_dssp ECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred ecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEE
Confidence 65321 00001111122334799999999999999999999776544333
No 266
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.68 E-value=1.4e-16 Score=118.78 Aligned_cols=180 Identities=16% Similarity=0.198 Sum_probs=92.6
Q ss_pred eeEEEEEEecccccccccEEEEEeCCCcE-EeCCCccE-EecCCcEEEEEEEeeeC----CCeeEEEECCeEEeeccCCC
Q psy15128 11 GKYQCYVQNMVGERETKPALLTVHAPPSF-VVRPQDQK-VGLNGIASFQCVAEGSP----LPSVFWTQEGSQVLMFPGNA 84 (292)
Q Consensus 11 G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~ 84 (292)
|.|.|.+.+.-+. .. .. .+..+|.+ +..+.... +..|+.++|.|.+.+++ ...+.|++++..+.......
T Consensus 1 ~~~~~~~~~~~~~--c~-~~-~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~ 76 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CP-AP-ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP 76 (240)
T ss_dssp --------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECC
T ss_pred CceeeeeeecCCC--CC-cc-ccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceecc
Confidence 7899999886543 21 11 11223443 34444444 55699999999999864 33799999998763211000
Q ss_pred ---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 85 ---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 85 ---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
.....+...+.|.|.....+|.|.|+|.+.+..+.......+.... ....+|.+.+.+.......|+.++|.|.+.
T Consensus 77 ~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~-~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~ 155 (240)
T 4acp_A 77 REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK-GQPREPQVYTLPPSRDELTKNQVSLTCLVK 155 (240)
T ss_dssp CEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC-SCCBCCEEEEECCCGGGGGSSEEEEEEEEE
T ss_pred ceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC-CCCCCCEEEEECCChHHhcCCceEEEEEEe
Confidence 0011122335788888878889999999998766433333332211 112344454444433334589999999998
Q ss_pred cC-CCC-ceEEEeCCeeCCCCC-ccEEEcCCCcEEEE
Q psy15128 162 GS-PPP-HIRWYKNGNSLPPED-TRINVSSSGSLQID 195 (292)
Q Consensus 162 ~~-p~~-~~~W~~~~~~l~~~~-~~~~~~~~~~l~i~ 195 (292)
++ |.+ .+.|+++|.++.... .......++++.+.
T Consensus 156 gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~ 192 (240)
T 4acp_A 156 GFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLY 192 (240)
T ss_dssp EEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE
T ss_pred EEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEE
Confidence 85 543 799999998864311 11222445555544
No 267
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.68 E-value=1.4e-15 Score=109.85 Aligned_cols=118 Identities=20% Similarity=0.259 Sum_probs=88.6
Q ss_pred cEEecCCcEEEEEEEeeeCCC--eeEEEECCeEEeeccCCCcceeE-EeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE
Q psy15128 46 QKVGLNGIASFQCVAEGSPLP--SVFWTQEGSQVLMFPGNAYGHLH-VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 46 ~~~~~g~~~~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~ 122 (292)
+.+..|++++|.|.+ +.|.| .|.|++.+..+ +... ......|.|.+++.+|.|.|.|.+.+..+....
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--------~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~ 87 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--------GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQH 87 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--------CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--------CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEE
Confidence 578899999999999 88777 99999854321 1111 233568999999999999999999998776666
Q ss_pred EEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC----CceEEEeCCeeCCC
Q psy15128 123 RAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP----PHIRWYKNGNSLPP 179 (292)
Q Consensus 123 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~----~~~~W~~~~~~l~~ 179 (292)
.+.|.|.. +|....+.+. ...+|+.+ |.|.+.+. |. +.+.|+|++.+|..
T Consensus 88 ~~~ltV~~----~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~ 142 (210)
T 1gsm_A 88 TVQLLVYA----FPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEG 142 (210)
T ss_dssp EEEEEEEB----CCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTT
T ss_pred EEEEEEEe----cCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccc
Confidence 67777763 2333333332 56678888 99999875 63 47999999999865
No 268
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.68 E-value=2.4e-17 Score=120.20 Aligned_cols=140 Identities=11% Similarity=0.105 Sum_probs=89.5
Q ss_pred CCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCCeeCCCCCcc--EE-EcCCCcEEEEeeecCCCCCC-----
Q psy15128 134 TPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNGNSLPPEDTR--IN-VSSSGSLQIDVLRDDFRAEP----- 205 (292)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~~~--~~-~~~~~~l~i~~~~~~d~g~~----- 205 (292)
.++|.+...|. ..+.+|+.++|.|.+. .+.+.+.|+|+|..+...... .. ....+.|.|.++..+|+|.|
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 45666666665 6688999999999996 467789999998765421000 00 01123566666666665511
Q ss_pred -------------------------------cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCC
Q psy15128 206 -------------------------------KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDP 254 (292)
Q Consensus 206 -------------------------------~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~ 254 (292)
+...+.+|+.++|.|.+ .+ +.+.|.|+|+|..+.... ........
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~- 159 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSS-RS-SYDMYHLSREGEAHERRL-PAGPKVNG- 159 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEE-SS-CCSEEEEEETTCSSCEEE-ECEEEETT-
T ss_pred cCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeC-CC-CCceEEEEECCcccCccc-ccccccCC-
Confidence 11246789999999997 54 567999999998763211 01111111
Q ss_pred ccccccccccccccccccccceeEEEEeecc
Q psy15128 255 WFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 255 ~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
.....|.|..++ |+|.|+|.|.+..
T Consensus 160 ----~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 160 ----TFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp ----EEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred ----ceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 012357788887 9999999999753
No 269
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.68 E-value=1.1e-16 Score=117.70 Aligned_cols=119 Identities=17% Similarity=0.151 Sum_probs=86.7
Q ss_pred cccCCcCCCeeEEEEEEeccc-ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee--CCCeeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...+....+..|+.++|.|.+.+. |.+.+.|++++
T Consensus 72 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g 151 (211)
T 3tv3_L 72 VSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADS 151 (211)
T ss_dssp EESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECC
Confidence 789999999999999999876 234444888888 56777766655555689999999999885 35789999999
Q ss_pred eEEeeccCC----CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 75 SQVLMFPGN----AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 75 ~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
..+...... ......+.....|.|.++..+|.|.|+|.+.|..+..
T Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~ 201 (211)
T 3tv3_L 152 SPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 201 (211)
T ss_dssp EEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEE
T ss_pred eecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCE
Confidence 876320000 0001112223579999999999999999999976543
No 270
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.68 E-value=9e-16 Score=113.08 Aligned_cols=152 Identities=17% Similarity=0.185 Sum_probs=91.2
Q ss_pred CCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--eEEe-e--c-cC-------CCcceeEEee---ecEEEEccCCC
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--SQVL-M--F-PG-------NAYGHLHVTQ---EGTLRIQGVQK 103 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~~~~-~--~-~~-------~~~~~~~~~~---~~~l~i~~~~~ 103 (292)
.+....+.+|++++|.|.+.+. +.+.+.|+|.. .... . . .. ....++.... ...|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 3446778899999999999763 35689999842 1111 0 0 00 0112333222 23699999999
Q ss_pred CCCeEEEEEEEeCCcC----eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC--CceEEEeCCeeC
Q psy15128 104 EDAGFFVCSALSVAGS----TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP--PHIRWYKNGNSL 177 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~~W~~~~~~l 177 (292)
+|+|.|.|.+.+..+. ......+.|... ...+|.+...+....+..|+.++|.|.+.+.++ ..+.|++++..+
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSG-QPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSS-CCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCC-CcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 9999999999876442 122234555421 123444443333345668999999999987643 357799998765
Q ss_pred CCCCccEEEcCCCcEEE
Q psy15128 178 PPEDTRINVSSSGSLQI 194 (292)
Q Consensus 178 ~~~~~~~~~~~~~~l~i 194 (292)
...........++.+.+
T Consensus 164 ~~~~~~~~~~~~g~~~~ 180 (215)
T 3nl4_H 164 GVRTFPSVRQSSGLYSL 180 (215)
T ss_dssp TEEECCCEECTTSCEEE
T ss_pred CeEecCceECCCCCEEE
Confidence 43222222344566666
No 271
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.67 E-value=8.9e-17 Score=127.24 Aligned_cols=120 Identities=19% Similarity=0.282 Sum_probs=92.6
Q ss_pred cccCCcCCCe-eEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEG-KYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G-~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+| .|+|.+.+..|..... +.|.|..+|.+ ......+|+.++|.|.+.|.|.|.+.|++++..+..
T Consensus 216 i~~v~~~D~G~~Y~C~a~n~~g~~~~~-~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~- 289 (347)
T 2ifg_A 216 LANVTSDLNRKNVTCWAENDVGRAEVS-VQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNE- 289 (347)
T ss_dssp EESCCSTTTTCCEEECCEETTEECCEE-ECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCC-
T ss_pred EeeCChHHCCCeEEEEEEcCCCCEEEE-EEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCC-
Confidence 6789999999 9999999998877555 78888777775 112245789999999999999999999999987641
Q ss_pred cCCCcceeE--------EeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 81 PGNAYGHLH--------VTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 81 ~~~~~~~~~--------~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
....... ....+.|.|.+++.+|+|.|+|.|.|..|.....+.+.|.
T Consensus 290 --~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 290 --TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp --CSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred --CcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 1111111 1225679999999999999999999999877766666553
No 272
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.67 E-value=3.4e-16 Score=115.12 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=82.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeeeCCC--eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGSPLP--SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|. .+|.+...+....+..|+.++|.|.+.+.+++ .+.|++++.
T Consensus 77 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 156 (212)
T 1q0x_L 77 ITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGT 156 (212)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCE
Confidence 789999999999999998765444344677774 45666655544445578999999999885433 899999998
Q ss_pred EEeeccCC----CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 76 QVLMFPGN----AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 76 ~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
.+...... ............|.|.++..+|.|.|+|.+.|....
T Consensus 157 ~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 157 PVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp EECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred eCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 76311000 000011223347899999999999999999987543
No 273
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.67 E-value=4.6e-16 Score=117.28 Aligned_cols=126 Identities=15% Similarity=0.232 Sum_probs=83.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEEECCeEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWTQEGSQVLM 79 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~~~~~~~~~ 79 (292)
|.+++.+|+|.|+|.+.+..+..... +.|.|..+|.+...+. .....|+.+.|.|.+.+ .|.+ .+.|++++..+..
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~ 163 (248)
T 3pv7_A 86 LPGIQLEEAGEYRCEVVVTPLKAQGT-VQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPH 163 (248)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCS
T ss_pred eCCCCHHHCeEEEEEEEeCCccceeE-EEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCC
Confidence 78899999999999999887665555 8999999888776654 33456778889999998 6888 9999998853210
Q ss_pred c----cC------CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 80 F----PG------NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 80 ~----~~------~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
. .. .............|.|.....+|.|.|+|.+.|..+.......+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~ 223 (248)
T 3pv7_A 164 PIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLT 223 (248)
T ss_dssp CEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC-
T ss_pred ccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEE
Confidence 0 00 00001112234578899999999999999999988775554444443
No 274
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.67 E-value=4e-16 Score=116.72 Aligned_cols=124 Identities=17% Similarity=0.225 Sum_probs=87.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEe---CCCcEEeCCCccEEecCCcEEEEEEEeee-C-CCeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVH---APPSFVVRPQDQKVGLNGIASFQCVAEGS-P-LPSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. | .+.+.|++++..
T Consensus 98 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~ 177 (237)
T 3sob_L 98 ISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL 177 (237)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred ECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCC
Confidence 789999999999999988665444444677774 45666655555555678899999999884 4 579999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEE
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAF 125 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~ 125 (292)
+... .........+.....|.|.....+|.|.|+|.+.|..........
T Consensus 178 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 178 QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEE
T ss_pred CCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeee
Confidence 6321 001111112233457899999999999999999998765544443
No 275
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=9e-17 Score=104.14 Aligned_cols=78 Identities=27% Similarity=0.438 Sum_probs=63.9
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+.+..+.+|+.+.|.|.+ .|.|.+.+.|++||+.|. .+.++.+..++ ....|.|..+..+|+|.|+|+|+|.
T Consensus 20 p~~~~v~~G~~~~l~C~~-~G~P~p~v~W~k~g~~l~--~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 20 PRPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLA--ASERLSFPADG-----AEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp CCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECC--CCSSEECCEET-----TEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEeCCCcEEEEEEE-EEecCCEEEEEECccccc--ceeeEEEeecC-----ceEEEEEecCChhhCEEEEEEEEEC
Confidence 456789999999999998 899999999999999996 34444443332 1236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
+|+++.
T Consensus 92 ~G~~~~ 97 (107)
T 3knb_B 92 AGEAYA 97 (107)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 998764
No 276
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.67 E-value=1.9e-15 Score=111.75 Aligned_cols=132 Identities=15% Similarity=0.253 Sum_probs=87.4
Q ss_pred CccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeecc---------CCCcceeEEee-----ecEEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMFP---------GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~---------~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +.... .....++.... ...|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 456788999999999998754 5689999853 11 11110 11123444332 3489999999
Q ss_pred CCCCeEEEEEEEeCCcC---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC--CceEEEeCCee
Q psy15128 103 KEDAGFFVCSALSVAGS---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP--PHIRWYKNGNS 176 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~--~~~~W~~~~~~ 176 (292)
.+|+|.|.|.+.+..+. ......|.|.... ..+|.+...+ ...+..|+.++|.|.+.+. |. +.+.|++++..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAES-ARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSC-CBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCC-CCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 99999999999886432 1122355554311 1234444433 3346789999999999876 65 68999999876
Q ss_pred C
Q psy15128 177 L 177 (292)
Q Consensus 177 l 177 (292)
+
T Consensus 166 ~ 166 (220)
T 2fbj_H 166 I 166 (220)
T ss_dssp C
T ss_pred c
Confidence 5
No 277
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.67 E-value=1.2e-15 Score=114.35 Aligned_cols=139 Identities=22% Similarity=0.364 Sum_probs=89.6
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--------------eEEeeccCCCcceeEEee----ecEEEEcc
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--------------SQVLMFPGNAYGHLHVTQ----EGTLRIQG 100 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--------------~~~~~~~~~~~~~~~~~~----~~~l~i~~ 100 (292)
+...+..+.+.+|++++|.|.+.+ +.+.+.|+|.. .... ......+..... ...|.|.+
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERD--KGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEE--ECSCCTTEEEEECTTSCEEEEECS
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCcccc--CcccCCeEEEEeCCCCEEEEEECc
Confidence 444566678999999999999865 67799999821 1111 111112333322 34799999
Q ss_pred CCCCCCeEEEEEEEeCCc---CeeEEEEEEEEee-cCCCCCeEE-eCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeC
Q psy15128 101 VQKEDAGFFVCSALSVAG---STTVRAFLQVTSV-EDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKN 173 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~---~~~~~~~l~v~~~-~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~ 173 (292)
++.+|+|.|+|.+.+... .......+.|... ....+|.+. ..+....+..|+.++|.|.+.+ .|.+ .+.|+++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 999999999999973211 1122334555421 111233333 3445455667999999999987 4555 6899999
Q ss_pred CeeCCCC
Q psy15128 174 GNSLPPE 180 (292)
Q Consensus 174 ~~~l~~~ 180 (292)
|.++...
T Consensus 162 g~~l~~~ 168 (240)
T 3q5y_A 162 GKEVHSG 168 (240)
T ss_dssp TEEECTT
T ss_pred CEECcCc
Confidence 9988653
No 278
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.66 E-value=1.2e-16 Score=121.86 Aligned_cols=165 Identities=19% Similarity=0.273 Sum_probs=76.5
Q ss_pred ccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEE-eCCCccEEecCCcEEEEEEEeee-CCC--eeEEEECCeEEe
Q psy15128 3 TEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFV-VRPQDQKVGLNGIASFQCVAEGS-PLP--SVFWTQEGSQVL 78 (292)
Q Consensus 3 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~-~~~--~v~W~~~~~~~~ 78 (292)
.+++. .|.|+|++.. .+......+.|.|..+|... +.+....+.+|+.++|.|.+.+. |.. .|.|+|++..+.
T Consensus 55 ~~v~~--~~~y~C~~~~-~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~ 131 (291)
T 1mq8_A 55 SNVQE--DSQPMCYSNC-PDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK 131 (291)
T ss_dssp ESCCS--CCCCEEEEEC-SSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEE
T ss_pred Eeccc--CCeEEEEEEc-CCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEee
Confidence 44542 3679999964 34445454889998877543 33344558889999999999875 444 589999998775
Q ss_pred eccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC--------eeEEEEEEEEeecCCCCCeEEeCCCCceecC
Q psy15128 79 MFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS--------TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPL 150 (292)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~--------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~ 150 (292)
...... ......|.+.....+|.+.|+|+|.+..+. ......|.|..... ..+.+.. + ..+.+
T Consensus 132 ~~~~~~-----~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~-~~~~~~~-p--~~l~e 202 (291)
T 1mq8_A 132 REPAVG-----EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA-TPPQLVS-P--RVLEV 202 (291)
T ss_dssp EEECCB-----TTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------------------
T ss_pred cccCCC-----CCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC-CCceecC-C--cCccC
Confidence 332110 112346777777777778999999986442 12223344432100 0011211 2 25779
Q ss_pred CCeEEEEeEeccCCCC---ceEEEeCCeeCCC
Q psy15128 151 HSVAFLPCQAVGSPPP---HIRWYKNGNSLPP 179 (292)
Q Consensus 151 g~~v~l~C~~~~~p~~---~~~W~~~~~~l~~ 179 (292)
|+.++|.|.+.+++++ .+.|+++|..+..
T Consensus 203 G~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 203 DTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp --------------------------------
T ss_pred CCeEEEEEEcCCCCCCcccEEEEEECCEecCc
Confidence 9999999999988554 5999999998865
No 279
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=5.3e-16 Score=116.08 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=80.3
Q ss_pred cccCCcCCCeeEEEEEEecccc-cccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE-RETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQV 77 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~ 77 (292)
|.+++.+|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|++..+
T Consensus 64 I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~ 141 (242)
T 1p6f_A 64 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSS 141 (242)
T ss_dssp ECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSC
T ss_pred ecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCcc
Confidence 6789999999999999875432 234447888874 45555544 4568899999999998654 4589999998755
Q ss_pred eeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 78 LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.. ..........|.|.+++.+|+|.|+|.+.+..
T Consensus 142 ~~------~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 142 HV------QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp EE------EEEECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred Cc------cccCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 32 01112335689999999999999999998753
No 280
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.66 E-value=2.5e-15 Score=111.64 Aligned_cols=135 Identities=16% Similarity=0.261 Sum_probs=83.0
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe----ecc-C-------CCcceeEEe-----eecEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL----MFP-G-------NAYGHLHVT-----QEGTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~----~~~-~-------~~~~~~~~~-----~~~~l~i~~ 100 (292)
.+....+.+|++++|.|.+.+.+ .+.+.|+|+. .... ... + ....+.... ....|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 34556788999999999998765 5789999863 2111 010 0 012334333 235899999
Q ss_pred CCCCCCeEEEEEEEeCCcCe-eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeC
Q psy15128 101 VQKEDAGFFVCSALSVAGST-TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSL 177 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l 177 (292)
++.+|+|.|.|.+.+..... .....|.|.... ..+|.+........+..|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK-TTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSC-CBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCC-CCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 99999999999998753211 122345554211 123333332222346689999999999875 666 89999998765
No 281
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.66 E-value=6.7e-16 Score=115.04 Aligned_cols=113 Identities=23% Similarity=0.332 Sum_probs=82.3
Q ss_pred cccCCcCCCeeEEEEEEecc-cccccccEEEEEeCCC---cEEeCCCccEEecCCcE-EEEEEE-eeeCCCeeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV-GERETKPALLTVHAPP---SFVVRPQDQKVGLNGIA-SFQCVA-EGSPLPSVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+.. +..... +.|.|..+| .+...+....+.+|+.+ .|.|.+ .+.|.+.+.|++++.
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~ 159 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEAT-ARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQ 159 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEE-EEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTE
T ss_pred EcccCcccCceEEEEEEecCCCceEEE-EEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCc
Confidence 77999999999999999886 444444 888888764 44455555667788888 999999 888999999999998
Q ss_pred EEeeccCCCcceeEEe------------eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 76 QVLMFPGNAYGHLHVT------------QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 76 ~~~~~~~~~~~~~~~~------------~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+...... ..+.... ..+.|.|.....+|.|.|+|.|.|.
T Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 160 RLEVPVEM-NPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp ECCCCSSC-CSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cCcccccc-ccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 76432200 0111111 1256888866666799999999984
No 282
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.66 E-value=6.8e-16 Score=116.80 Aligned_cols=115 Identities=21% Similarity=0.305 Sum_probs=84.9
Q ss_pred cccCCcCCCeeEEEEEEecccc----cccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCC-----eeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE----RETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLP-----SVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-----~v~W~~ 72 (292)
|.+++++|+|.|+|.+.+..+. .....+.|.|..+|.+...+....+.+|++++|.|.+.+.|.+ .+.|+|
T Consensus 83 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 83 LSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp ECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 7899999999999999987552 2223378889888877777777889999999999999887654 899999
Q ss_pred --CCeEEee--c-c----CCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 73 --EGSQVLM--F-P----GNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 73 --~~~~~~~--~-~----~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
++..+.. . . .....++... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 218 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSH 218 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 4543311 0 0 0011222221 2347999999999999999999874
No 283
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.66 E-value=6.2e-16 Score=116.35 Aligned_cols=140 Identities=21% Similarity=0.332 Sum_probs=89.9
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC--------------CeEEeeccCCCcceeEEee----ecEEEEc
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE--------------GSQVLMFPGNAYGHLHVTQ----EGTLRIQ 99 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--------------~~~~~~~~~~~~~~~~~~~----~~~l~i~ 99 (292)
.+...+..+.+.+|++++|.| ..+.+.+.+.|+|. +.... .......+..... ...|.|.
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 4 KVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVME-KSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEE-ECTTCCTTEEEECCTTSCEEEEEC
T ss_pred ceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceec-cCCCccCCEEEEeccCceEEEEEC
Confidence 344556677899999999999 55667889999982 11111 1110002333322 3389999
Q ss_pred cCCCCCCeEEEEEEEeCC----cCeeEEEEEEEEeec-C-CCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEE
Q psy15128 100 GVQKEDAGFFVCSALSVA----GSTTVRAFLQVTSVE-D-TPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWY 171 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~----~~~~~~~~l~v~~~~-~-~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~ 171 (292)
+++.+|+|.|+|.+.+.. ........+.|.... . .++.+....+....+.+|+.++|.|.+.+. |.+ .+.|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 999999999999998532 112223345554211 1 123333444555556679999999999874 444 79999
Q ss_pred eCCeeCCC
Q psy15128 172 KNGNSLPP 179 (292)
Q Consensus 172 ~~~~~l~~ 179 (292)
++|..+..
T Consensus 162 ~~g~~l~~ 169 (245)
T 4ei6_B 162 VNGKEVHS 169 (245)
T ss_dssp ETTEEECT
T ss_pred ECCEECCC
Confidence 99998865
No 284
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.66 E-value=2.1e-15 Score=111.59 Aligned_cols=132 Identities=16% Similarity=0.362 Sum_probs=84.6
Q ss_pred CCccEEecCCcEEEEEEEeee--CCCeeEEEECC--eEE--e-eccC-----------CCcceeEEeee-----cEEEEc
Q psy15128 43 PQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--SQV--L-MFPG-----------NAYGHLHVTQE-----GTLRIQ 99 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~~~--~-~~~~-----------~~~~~~~~~~~-----~~l~i~ 99 (292)
+....+.+|++++|.|.+.+. +.+.+.|+|.. ... . .... ....+.....+ ..|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 345668899999999999864 35689999842 111 1 0000 01233433322 269999
Q ss_pred cCCCCCCeEEEEEEEeCC--cCeeEEEEEEEEeecCCCCCeEE-eCCCCceecCCCeEEEEeEecc-CCC--CceEEEeC
Q psy15128 100 GVQKEDAGFFVCSALSVA--GSTTVRAFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVG-SPP--PHIRWYKN 173 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~--~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-~p~--~~~~W~~~ 173 (292)
+++.+|+|.|.|.+.+.. ........+.|.... ..+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|+++
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~-~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS-PTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC-CBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEecCC-CCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 999999999999998753 122223445554221 2233343 333333 78999999999987 565 48999999
Q ss_pred CeeC
Q psy15128 174 GNSL 177 (292)
Q Consensus 174 ~~~l 177 (292)
+..+
T Consensus 164 g~~~ 167 (221)
T 3m8o_H 164 GQGV 167 (221)
T ss_dssp STTC
T ss_pred CEEC
Confidence 8776
No 285
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.66 E-value=1.8e-15 Score=113.85 Aligned_cols=141 Identities=22% Similarity=0.416 Sum_probs=90.4
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eE--Eee-cc------CCCcceeEEe----eecEEEEccCCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQ--VLM-FP------GNAYGHLHVT----QEGTLRIQGVQK 103 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~--~~~-~~------~~~~~~~~~~----~~~~l~i~~~~~ 103 (292)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. .. ... .. .....++... ....|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 334556778899999999999998888899999832 11 110 00 0011222222 234799999999
Q ss_pred CCCeEEEEEEEeCCc-----C-eeEEEEEEEEee-cCCCCCeEE-eCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeC
Q psy15128 104 EDAGFFVCSALSVAG-----S-TTVRAFLQVTSV-EDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKN 173 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~-----~-~~~~~~l~v~~~-~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~ 173 (292)
+|+|.|+|.+.+..+ . ......+.|... ....+|.+. ..+....+..|+.++|.|.+.+. |++ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999988322 1 112234555421 011233333 33444445569999999999885 444 6899999
Q ss_pred CeeCCC
Q psy15128 174 GNSLPP 179 (292)
Q Consensus 174 ~~~l~~ 179 (292)
|..+..
T Consensus 164 g~~l~~ 169 (245)
T 3nfj_J 164 GKEVHS 169 (245)
T ss_dssp TEEECT
T ss_pred CEECCC
Confidence 998865
No 286
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.65 E-value=7.5e-17 Score=115.99 Aligned_cols=106 Identities=14% Similarity=0.221 Sum_probs=74.5
Q ss_pred ccc-CCcCCCeeEEEEEEecccccccccEEEEEeC--CCcE----------------E----eCCCc---cEEecCCcEE
Q psy15128 2 ITE-VKKSDEGKYQCYVQNMVGERETKPALLTVHA--PPSF----------------V----VRPQD---QKVGLNGIAS 55 (292)
Q Consensus 2 i~~-v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~p~~----------------~----~~~~~---~~~~~g~~~~ 55 (292)
|.+ ++.+|+|.|+|.+.|..|..... +.+.|.. ++.. . ..... ..+.+|+.+.
T Consensus 48 I~~~~~~~D~G~Y~C~a~n~~g~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 126 (186)
T 1jbj_A 48 LQDFSEVEDSGYYVCYTPASNKNTYLY-LKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVL 126 (186)
T ss_dssp EESCCTTTSCEEEEEECSSCCCCCCEE-ECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEE
T ss_pred ECCCCccccCEEEEEEEEeCCCcEEEE-EEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEE
Confidence 678 99999999999999987763322 3333322 1110 0 00001 1233899999
Q ss_pred EEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 56 FQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 56 l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
|.|.+ |.+.+.|+|++..+.... ...+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 127 l~C~~---p~p~i~W~k~g~~i~~~~---------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 127 LTCGL---TDKTIKWLKDGSIISPLN---------ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EECSS---SCSCEEEEETTEECCCSS---------CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred EEeeC---CCCeEEEEECCEECcccC---------CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 99988 788999999998763111 135689999999999999999999876643
No 287
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.65 E-value=3.3e-16 Score=115.68 Aligned_cols=119 Identities=18% Similarity=0.273 Sum_probs=82.8
Q ss_pred cccCCcCCCeeEEEEEEeccc----ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG----ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~----~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~ 71 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...+.......|+.++|.|.+.+ .|.+ .+.|+
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 79 ISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWK 158 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEE
Confidence 789999999999999998765 223333788887 4566665555555667889999999988 4666 89999
Q ss_pred ECCeEEeeccCCCc---ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 72 QEGSQVLMFPGNAY---GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 72 ~~~~~~~~~~~~~~---~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+++..+........ ....+...+.|.|.....+|.|.|+|.+.|..+..
T Consensus 159 k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 210 (218)
T 3s96_B 159 ANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTV 210 (218)
T ss_dssp ETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEE
T ss_pred ECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcc
Confidence 99987642110000 01112223458888888899999999999986543
No 288
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.65 E-value=1.2e-16 Score=118.27 Aligned_cols=124 Identities=17% Similarity=0.215 Sum_probs=87.6
Q ss_pred cccCCcCCCeeEEEEEEecc-cccccccEEEEEeCCCcEEeCCCccEEecCCcE-EEEEEEe-eeCCCeeEEEECCeEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV-GERETKPALLTVHAPPSFVVRPQDQKVGLNGIA-SFQCVAE-GSPLPSVFWTQEGSQVL 78 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~v~W~~~~~~~~ 78 (292)
|.+++.+|+|.|+|.+.+.. +..... +.|.|..+|.+...+.... ..|+.+ .|.|.+. +.|.+.+.|++++....
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~-~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~ 159 (221)
T 3eow_R 82 MFGLRVEDEGSYTCLFVTFPQGSRSVD-IWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 159 (221)
T ss_dssp CCCSSCCCCSCBEEEEEESSSCSCEEE-CCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCC
T ss_pred EccCChHHCeEEEEEEEeCCCCceEEE-EEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCC
Confidence 78999999999999999876 444333 7888888888765443333 678888 5999987 78889999998754332
Q ss_pred eccC-CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 79 MFPG-NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
.... ...........+.|.|.++..+|.|.|+|.+.|..+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 160 QTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp CCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred ccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 1100 000111122345799999999999999999999887665555443
No 289
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.65 E-value=1.7e-15 Score=110.37 Aligned_cols=115 Identities=20% Similarity=0.283 Sum_probs=77.5
Q ss_pred cccCCcCCCeeEEEEEEeccccccc----ccEEEEEeCC---CcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERET----KPALLTVHAP---PSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~----~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+.... ..+.|.|..+ |.+... ....|+.+.|.|.+. +.|.|.+.|+++
T Consensus 69 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~ 144 (201)
T 1dr9_A 69 ILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLEN 144 (201)
T ss_dssp ECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEES
T ss_pred EecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEEC
Confidence 7899999999999999997665432 3377777765 333221 113478899999995 889999999999
Q ss_pred CeEEeeccCCCcceeEEeee-cE---EEEccCCCCCCeEEEEEEEeCCcCeeEEE
Q psy15128 74 GSQVLMFPGNAYGHLHVTQE-GT---LRIQGVQKEDAGFFVCSALSVAGSTTVRA 124 (292)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~-~~---l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~ 124 (292)
+..+... ......... +. ..+..+..+|.|.|+|.|.|..+......
T Consensus 145 g~~l~~~----~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~ 195 (201)
T 1dr9_A 145 GEELNAI----NTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTF 195 (201)
T ss_dssp SCEECCS----EEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEE
T ss_pred CEECccc----cceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEE
Confidence 8776411 111111111 11 12234456899999999999887665443
No 290
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.65 E-value=1.4e-15 Score=110.08 Aligned_cols=106 Identities=13% Similarity=0.181 Sum_probs=75.9
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcE---EeCCCccEEecCC-cEEEEEEEeee-CCCeeEEEECCe
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSF---VVRPQDQKVGLNG-IASFQCVAEGS-PLPSVFWTQEGS 75 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~---~~~~~~~~~~~g~-~~~l~C~~~~~-~~~~v~W~~~~~ 75 (292)
.|.+++.+|+|.|+|.+.+..+..... +.|.|..++.. ...+ .....|. .++|.|.+.+. |.+.+.|++++.
T Consensus 73 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~ 149 (193)
T 2if7_A 73 QLSNLKMEDTGSYRAQISTKTSAKLSS-YTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGN 149 (193)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEE-EEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTE
T ss_pred EECCCCcccCceEEEEEEecCCCeEEE-EEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCE
Confidence 378999999999999999887765544 88888876432 2222 1223454 79999999884 578999999987
Q ss_pred EEeeccCCCcceeEEeeecEEEEccCCCC-CCeEEEEEEEeCCcCeeE
Q psy15128 76 QVLMFPGNAYGHLHVTQEGTLRIQGVQKE-DAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~g~Y~C~~~~~~~~~~~ 122 (292)
.+. ....|.|.....+ |.|.|+|.|.|..+....
T Consensus 150 ~l~-------------~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 150 TLS-------------SQPNLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp EEE-------------SSSEEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred EcC-------------CCCeEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 542 1234666544444 899999999998876543
No 291
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.65 E-value=1.7e-14 Score=106.84 Aligned_cols=135 Identities=16% Similarity=0.270 Sum_probs=87.9
Q ss_pred CccEEecCCcEEEEEEEeeeC--CCeeEEEECC--e--E-Eeec-c--------CCCcceeEEee-----ecEEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--S--Q-VLMF-P--------GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~--~-~~~~-~--------~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+.+ .+.+.|+|.. . . +... . .....++.... ...|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 466788999999999998754 4689999853 1 1 1111 0 11123444432 3489999999
Q ss_pred CCCCeEEEEEEEeCCc---C---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEe-C
Q psy15128 103 KEDAGFFVCSALSVAG---S---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYK-N 173 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~---~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~-~ 173 (292)
.+|+|.|.|.+.+..+ . ......|.|.... ..+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++ +
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS-ASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC-CBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCC-CCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 9999999999987642 1 1122355554211 123333322222335789999999999877 766 899999 8
Q ss_pred CeeCCC
Q psy15128 174 GNSLPP 179 (292)
Q Consensus 174 ~~~l~~ 179 (292)
|..+..
T Consensus 167 g~~l~~ 172 (223)
T 1dee_B 167 NSDISS 172 (223)
T ss_dssp SCBCSC
T ss_pred CCccce
Confidence 887754
No 292
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.65 E-value=1e-15 Score=115.36 Aligned_cols=162 Identities=14% Similarity=0.162 Sum_probs=81.8
Q ss_pred cccCCcCCCeeEEEEEEeccc----ccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG----ERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG 74 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~----~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~ 74 (292)
|.+++.+|+|.|+|.+.+... ...+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.+.|+|++
T Consensus 66 I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g 143 (257)
T 1b6u_A 66 IGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREG 143 (257)
T ss_dssp ECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETT
T ss_pred eecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECC
Confidence 778999999999999986432 2234447788864 355555554 467899999999998765 4689999998
Q ss_pred eEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCc---Ce--eEEEEEEEEeecCCCCCeEEe-CCCCcee
Q psy15128 75 SQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG---ST--TVRAFLQVTSVEDTPPPIVQV-GPSNQTL 148 (292)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~---~~--~~~~~l~v~~~~~~~~~~~~~-~~~~~~~ 148 (292)
..+........ ......+..|.|.+++ |+|.|+|.+.+... .. +....|.|.. +|.... .+.....
T Consensus 144 ~~~~~~~~~~~-~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g-----~p~~~~p~~~~~~~ 215 (257)
T 1b6u_A 144 EAHERRFSAGP-KVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTG-----NPSNSWPSPTEPSS 215 (257)
T ss_dssp SSCEECCBCBC-CSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBC-----CC------------
T ss_pred cccCccccccc-ccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEec-----cCCCCCCCCcccCc
Confidence 76532111000 0000125689999998 99999999986532 11 2223444432 222221 1222335
Q ss_pred cCCCeEEEEeEeccCCCCceEEEeCC
Q psy15128 149 PLHSVAFLPCQAVGSPPPHIRWYKNG 174 (292)
Q Consensus 149 ~~g~~v~l~C~~~~~p~~~~~W~~~~ 174 (292)
..|..+.|.|.+ +.+.+.+.|..-+
T Consensus 216 ~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 216 ETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp --------------------------
T ss_pred cCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 578889999876 5557778887543
No 293
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.65 E-value=5.7e-16 Score=117.09 Aligned_cols=128 Identities=18% Similarity=0.204 Sum_probs=87.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC---------------CCcEEeCCCccEEecCCcEEEEEEEeeeCCC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---------------PPSFVVRPQDQKVGLNGIASFQCVAEGSPLP 66 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 66 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+....+.+|++++|.|.+.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 7899999999999999986555434447888874 4566667777889999999999999887765
Q ss_pred ----eeEEEECC--eEEe--eccC-----CCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCCcCe-eEEEEEEEE
Q psy15128 67 ----SVFWTQEG--SQVL--MFPG-----NAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVAGST-TVRAFLQVT 129 (292)
Q Consensus 67 ----~v~W~~~~--~~~~--~~~~-----~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~ 129 (292)
.+.|+|+. .... .... ....++... ....|.|.+++.+|+|.|+|.+.+..... .....|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 89999842 2111 1000 011222221 13369999999999999999998754322 223345554
No 294
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.65 E-value=9.5e-16 Score=114.56 Aligned_cols=147 Identities=17% Similarity=0.165 Sum_probs=92.9
Q ss_pred EecCCcEEEEEEEeee---CCC-eeEEEECCeEEeeccCCC---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 48 VGLNGIASFQCVAEGS---PLP-SVFWTQEGSQVLMFPGNA---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 48 ~~~g~~~~l~C~~~~~---~~~-~v~W~~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+.+|++++|.|.+.+. |.+ .+.|+|++..+....... .....+.....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6789999999999887 665 899999986553111000 000112334579999999999999999999887754
Q ss_pred eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCCCC-ccEEEcCCCcEEEE
Q psy15128 121 TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPPED-TRINVSSSGSLQID 195 (292)
Q Consensus 121 ~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~~~-~~~~~~~~~~l~i~ 195 (292)
.....+... .....+|.+.+.+.......|+.++|.|.+.+. |. ..+.|+++|.++.... .......++++.+.
T Consensus 109 ~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~ 185 (239)
T 1i1c_A 109 PIEKSISKP-EGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLY 185 (239)
T ss_dssp CEEEEECCC-SSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE
T ss_pred CcEEEEecC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEE
Confidence 333222210 111234455444433333458899999999885 44 4799999999875421 11223455555554
No 295
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.65 E-value=5.3e-16 Score=114.21 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=79.8
Q ss_pred cccCCcCCCeeEEEEEEecccccc---cccEEEEEeCCC---cEEeCCCccEEecCCcEEEEEEEeee----CCCeeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERE---TKPALLTVHAPP---SFVVRPQDQKVGLNGIASFQCVAEGS----PLPSVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~---~~~~~l~v~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~v~W~ 71 (292)
|.+++.+|+|.|+|.+.+..+... ...+.|.|..++ .+.. + ..+.+|+.++|.|.+.+. |.+.+.|+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~--~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-L--EPLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC-----CCCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-C--ccccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 789999999999999998753221 234888887643 3322 2 236789999999999763 78899999
Q ss_pred ECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 72 QEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
+++.... .. . ....+.|.|..+..+|.|.|+|.|.|..+.......+.
T Consensus 163 ~~~~~~~---~~---~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 163 GNALSPL---DP---E--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp SSTTSSS---CS---S--CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred CCCCccC---CC---C--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 9885421 10 1 13456899999999999999999999765444444443
No 296
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.65 E-value=1.9e-15 Score=115.23 Aligned_cols=142 Identities=18% Similarity=0.327 Sum_probs=91.4
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEEC--CeEEe---e-------ccCCCc-ceeEEee----ecEEEEc
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQE--GSQVL---M-------FPGNAY-GHLHVTQ----EGTLRIQ 99 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~--~~~~~---~-------~~~~~~-~~~~~~~----~~~l~i~ 99 (292)
+.+...+....+.+|++++|.|.+. .+.+.+.|+|. +.... . ...... .+..... +..|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 3444556667899999999999986 56779999982 21110 0 011111 3333332 4579999
Q ss_pred cCCCCCCeEEEEEEEeCC--cCeeEEEEEEEEeec-CCCCCe-EEeCCCCceecCCCeEEEEeEeccCCC-C-ceEEEeC
Q psy15128 100 GVQKEDAGFFVCSALSVA--GSTTVRAFLQVTSVE-DTPPPI-VQVGPSNQTLPLHSVAFLPCQAVGSPP-P-HIRWYKN 173 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~--~~~~~~~~l~v~~~~-~~~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~p~-~-~~~W~~~ 173 (292)
+++.+|+|.|+|.+.+.. ........+.|.... ...+|. ....+....+.+|+.++|.|.+.+.++ + .+.|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 999999999999998742 222223345554211 112333 333455555667999999999988644 4 7999999
Q ss_pred CeeCCC
Q psy15128 174 GNSLPP 179 (292)
Q Consensus 174 ~~~l~~ 179 (292)
|..+..
T Consensus 186 g~~l~~ 191 (268)
T 3pl6_D 186 GKEVHS 191 (268)
T ss_dssp SSEECT
T ss_pred CEECCC
Confidence 988865
No 297
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.65 E-value=8.5e-15 Score=108.22 Aligned_cols=133 Identities=22% Similarity=0.323 Sum_probs=88.2
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---EeeccC---C--------CcceeEEee-----ecEEEEc
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMFPG---N--------AYGHLHVTQ-----EGTLRIQ 99 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~~---~--------~~~~~~~~~-----~~~l~i~ 99 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|++ .. +..... . ...+..... ...|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4456788999999999998765 6789999853 21 111100 0 013333322 2389999
Q ss_pred cCCCCCCeEEEEEEEeCCcCe-e--EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCC
Q psy15128 100 GVQKEDAGFFVCSALSVAGST-T--VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNG 174 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~~~~~-~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~ 174 (292)
+++.+|+|.|+|.+.+..+.. . ....|.|.... ..+|.+...+....+.+|+.++|.|.+.+. |.| .+.|++++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT-TTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-CBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC-CCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 999999999999999864321 1 23455554321 223444433333346789999999999887 888 99999987
Q ss_pred ee
Q psy15128 175 NS 176 (292)
Q Consensus 175 ~~ 176 (292)
..
T Consensus 166 ~~ 167 (220)
T 1pz5_B 166 LS 167 (220)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 298
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.65 E-value=4.5e-16 Score=115.31 Aligned_cols=121 Identities=19% Similarity=0.264 Sum_probs=84.2
Q ss_pred cccCCcCCCeeEEEEEEecccc----cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE----RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~ 71 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 164 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 164 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEe
Confidence 7899999999999999986541 222336788864 3555443333345679999999999985 887 99999
Q ss_pred ECCeEEeecc--CC-CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEE
Q psy15128 72 QEGSQVLMFP--GN-AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAF 125 (292)
Q Consensus 72 ~~~~~~~~~~--~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~ 125 (292)
+++..+.... .. ..+ .....+.|.|.++..+| |.|+|.+.|..+.......
T Consensus 165 ~~g~~~~~~~~~~~~~~~--~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 165 SGSLSSGVHTFPAVLQSD--LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp GGTBCTTEEEEEEEEETT--EEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cCCeEcceEeccccccCC--cEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 9886431100 00 001 22234579999999999 9999999998887655443
No 299
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.64 E-value=1.7e-15 Score=112.08 Aligned_cols=120 Identities=15% Similarity=0.218 Sum_probs=83.0
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 7899999999999999986532 121337788863 4555544433446789999999999987 888 9999998
Q ss_pred CeEE--eeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 74 GSQV--LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 74 ~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
+... ...+..... ......+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 165 ~~~~~~~~~~~~~~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 165 ALSSGVRTVSSVLQS-GFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp TCCTTEEECCCEEET-TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred CcccceEEcCCcccC-CeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 7631 011100000 122335679999988866 99999999988865443
No 300
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.64 E-value=1.9e-16 Score=118.25 Aligned_cols=119 Identities=17% Similarity=0.205 Sum_probs=71.0
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeeeC-CC-eeEEEECCe
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGSP-LP-SVFWTQEGS 75 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~-~v~W~~~~~ 75 (292)
.|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+......+|+.++|.|.+.+.+ .+ .+.|++++.
T Consensus 96 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 175 (233)
T 3bqu_C 96 TIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 175 (233)
T ss_dssp C-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC--
T ss_pred EECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCe
Confidence 47899999999999999887654333334566654 56666544444445799999999998854 43 799999987
Q ss_pred EEeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 76 QVLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 76 ~~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
.+... .............+.|.|..+..+|.|.|+|.+.|....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 176 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp ---CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred eCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 65321 000011112223457899999999999999999986543
No 301
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=116.26 Aligned_cols=170 Identities=21% Similarity=0.253 Sum_probs=102.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeC-----CCeeEEEECC--eE--Eeecc-----CCCcceeEEe---eecEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSP-----LPSVFWTQEG--SQ--VLMFP-----GNAYGHLHVT---QEGTLRI 98 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~v~W~~~~--~~--~~~~~-----~~~~~~~~~~---~~~~l~i 98 (292)
.+.+...+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. ..... .....++... ....|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 44555666777889999999999998766 4789999853 21 11110 0011233332 2347999
Q ss_pred ccCCCCCCeEEEEEEEeCCcCe-eEEEEEEEEeecCCC----CC--------------eEEeCCCCceecCCCeEEEEeE
Q psy15128 99 QGVQKEDAGFFVCSALSVAGST-TVRAFLQVTSVEDTP----PP--------------IVQVGPSNQTLPLHSVAFLPCQ 159 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~----~~--------------~~~~~~~~~~~~~g~~v~l~C~ 159 (292)
.+++.+|+|.|+|.+.+..+.. .....|.|....... +| .....+....+.+|++++|.|.
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~ 174 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCV 174 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEE
Confidence 9999999999999998764321 122344444321100 11 1222344567889999999999
Q ss_pred eccCCC--CceEEEeCC--eeCC------------------CCCccEEEcC-----CCcEEEEeeecCCCCCC
Q psy15128 160 AVGSPP--PHIRWYKNG--NSLP------------------PEDTRINVSS-----SGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 160 ~~~~p~--~~~~W~~~~--~~l~------------------~~~~~~~~~~-----~~~l~i~~~~~~d~g~~ 205 (292)
+.+.+. +.+.|+++. ..+. ....++.... ..+|.|.++..+|+|.|
T Consensus 175 ~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 247 (268)
T 1x9q_A 175 TSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIY 247 (268)
T ss_dssp EESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred ecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEE
Confidence 987753 679999852 2110 1112333321 23688888888887743
No 302
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.64 E-value=8.9e-16 Score=115.97 Aligned_cols=119 Identities=20% Similarity=0.293 Sum_probs=83.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC---CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA---PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~~ 76 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++..
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 192 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 192 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCee
Confidence 7899999999999999887554333336777764 4666554444444578999999999885 443 7999999987
Q ss_pred Eeec-----cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 77 VLMF-----PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 77 ~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+... ...............|.|.++..+|.|.|+|.+.|.....
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 193 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp ECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 5321 0000111112234579999999999999999999876554
No 303
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.63 E-value=1.8e-15 Score=111.79 Aligned_cols=123 Identities=20% Similarity=0.257 Sum_probs=81.7
Q ss_pred cccCCcCCCeeEEEEEEecccc---cccccEEEEEeCC----CcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE---RETKPALLTVHAP----PSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|... |.+...+....+.+|+.++|.|.+.+ .|.+ .+.|++
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 162 (219)
T 1c1e_H 83 INNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (219)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEe
Confidence 7899999999999999987531 2223377888753 55544443344678999999999998 7888 999999
Q ss_pred CCeEEeeccCCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEE
Q psy15128 73 EGSQVLMFPGNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAF 125 (292)
Q Consensus 73 ~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~ 125 (292)
++..+....... .........+.|.|..... |.|.|+|.|.|..+.......
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp GTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEE
T ss_pred CCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEe
Confidence 986531110000 0001122335788854444 569999999998776554443
No 304
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.63 E-value=5.6e-15 Score=109.80 Aligned_cols=134 Identities=19% Similarity=0.241 Sum_probs=85.7
Q ss_pred CCccEEecCCcEEEEEEEeeeCC----CeeEEEECC--eE---Eeecc--------CCCcceeEEee-----ecEEEEcc
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPL----PSVFWTQEG--SQ---VLMFP--------GNAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~----~~v~W~~~~--~~---~~~~~--------~~~~~~~~~~~-----~~~l~i~~ 100 (292)
+....+.+|++++|.|.+.+.+. +.+.|+|.. .. +.... .....+..... ...|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 44567889999999999987664 789999852 21 11110 01123444332 35899999
Q ss_pred CCCCCCeEEEEEEEeCCc------C---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceE
Q psy15128 101 VQKEDAGFFVCSALSVAG------S---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIR 169 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~------~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~ 169 (292)
++.+|+|.|.|.+.+..+ . ....+.|.|.... ..+|.+...+....+..|+.++|.|.+.+. |.+ .+.
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC-CBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC-CCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEE
Confidence 999999999999988653 1 1122455554211 123444433323346789999999999876 777 899
Q ss_pred EEeCCeeC
Q psy15128 170 WYKNGNSL 177 (292)
Q Consensus 170 W~~~~~~l 177 (292)
|++++..+
T Consensus 166 W~~~~~~~ 173 (228)
T 3bae_H 166 WNSGSLSS 173 (228)
T ss_dssp EGGGTCCT
T ss_pred EeeCCccc
Confidence 99988754
No 305
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.63 E-value=1.4e-15 Score=112.90 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=79.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+.........+.|.|.. +|.+........+.+|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 7899999999999999986432222336888874 3444433323346689999999999985 766 999999886
Q ss_pred EEeeccCCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 76 QVLMFPGNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
.+....... .........+.|.|..+..+| |.|+|.+.|..+.......+
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 213 (227)
T 1mju_H 163 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 213 (227)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEe
Confidence 531110000 000122335579999999888 99999999977665544444
No 306
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=101.04 Aligned_cols=110 Identities=27% Similarity=0.546 Sum_probs=82.7
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...+.....++.|.|.+++.+|+|.|+|.+.|
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~----~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVST----QDSRIKQLENGVLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCT----TSTTEEEEETTEEEEESCCGGGCCCEEEEEEC
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC----CCCeEEEccCCEEEEccCCcCCCEEEEEEEEc
Confidence 56677777788899999999999999999999999999876531 22334445577999999999999999999999
Q ss_pred CCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCC
Q psy15128 116 VAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHS 152 (292)
Q Consensus 116 ~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~ 152 (292)
..|.....+.|.|.. .+.+.+...+....+.+|.
T Consensus 84 ~~g~~~~~~~l~V~~---~~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 84 PSGEATWSAYIEVQE---FGVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp SSCEEEEECCEEEEC---CSCCCCCCCCCCCCCCCCC
T ss_pred CCCcEEEEEEEEEEe---CCCCccCCCCCCCccCCCC
Confidence 988877777777764 2233333344444455553
No 307
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=2.5e-16 Score=116.61 Aligned_cols=155 Identities=19% Similarity=0.317 Sum_probs=95.6
Q ss_pred CCccEEecCCcEEEEEEEee-eCCC----eeEEEECCeEEeec---c--C---CCcceeEEe--------eecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEG-SPLP----SVFWTQEGSQVLMF---P--G---NAYGHLHVT--------QEGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~-~~~~----~v~W~~~~~~~~~~---~--~---~~~~~~~~~--------~~~~l~i~~~ 101 (292)
+..+.+.+|++++|.|.+.+ .+.+ .+.|++++...... . + ....+..+. .+..|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34566788999999999854 3433 49999986421100 0 0 001222222 3568999999
Q ss_pred CCCCCeEEEEEEEeCC-cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeE-EEEeEec-cCCCCceEEEeCCeeCC
Q psy15128 102 QKEDAGFFVCSALSVA-GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVA-FLPCQAV-GSPPPHIRWYKNGNSLP 178 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v-~l~C~~~-~~p~~~~~W~~~~~~l~ 178 (292)
+.+|+|.|+|.+.+.. +.....+.|.|.. +|.+...+.... ..|+.+ .|.|.+. +.|.|.+.|++++....
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~-----~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~ 159 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLA-----KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 159 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCC-----CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCC
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEE-----CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCC
Confidence 9999999999999865 5555555555542 444433322222 578888 5999986 78999999998754433
Q ss_pred CCCccEEEcCC------CcEEEEeeecCCCCC
Q psy15128 179 PEDTRINVSSS------GSLQIDVLRDDFRAE 204 (292)
Q Consensus 179 ~~~~~~~~~~~------~~l~i~~~~~~d~g~ 204 (292)
.. .......+ ..|.|..+..+|.|.
T Consensus 160 ~~-~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 190 (221)
T 3eow_R 160 QT-SQVPGFLSGTVTVTSLWILVPSSQVDGKQ 190 (221)
T ss_dssp CC-EEECCCCBTTBCCEEEEECCCCSCCCCCC
T ss_pred cc-ceeecCCCCcEEEEEEEEEeCCHHHCCCe
Confidence 21 11111111 246677676666664
No 308
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.63 E-value=1e-14 Score=110.45 Aligned_cols=177 Identities=15% Similarity=0.156 Sum_probs=105.2
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEEe--e-cc--C-------CCcceeEEee-----ecEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQVL--M-FP--G-------NAYGHLHVTQ-----EGTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~~--~-~~--~-------~~~~~~~~~~-----~~~l~i~~ 100 (292)
.+....+.+|++++|.|.+.+.+ .+.+.|+|+. .... . .. . ....++.... ...|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 34566788999999999998765 5789999863 2111 0 00 0 0123343332 34899999
Q ss_pred CCCCCCeEEEEEEEeCCcCe---eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCe
Q psy15128 101 VQKEDAGFFVCSALSVAGST---TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGN 175 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~ 175 (292)
++.+|+|.|.|.+.+..+.. .....|.|.... ..+|.+...+....+..|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-CBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCC-CCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 99999999999998853211 122355554311 123333332222346789999999999875 666 899999987
Q ss_pred eCCCC-CccEEE----cCCCcEEEEeeecCCCCCCcceEEeCCCceEEEe
Q psy15128 176 SLPPE-DTRINV----SSSGSLQIDVLRDDFRAEPKDTRVASGETALLEC 220 (292)
Q Consensus 176 ~l~~~-~~~~~~----~~~~~l~i~~~~~~d~g~~~~~~~~~g~~~~l~C 220 (292)
.+... ...... .....|.|..+..+| |.|.......+....+.-
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~ 219 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 219 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEE
Confidence 65321 011111 112246676666666 877655555554444433
No 309
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.63 E-value=1.5e-15 Score=114.93 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=82.8
Q ss_pred cccCCcCCCeeEEEEEEecc---cccccccEEEEEeC----------------CCcEEeCCCccEEecCCcEEEEEEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV---GERETKPALLTVHA----------------PPSFVVRPQDQKVGLNGIASFQCVAEG 62 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~---~~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~ 62 (292)
|.+++.+|+|.|+|.+.+.. .......+.|.|.. +|.+...+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 164 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQ 164 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEec
Confidence 78999999999999998862 11222337888874 566667777788999999999999998
Q ss_pred eCCCeeEEEECC--eEEe--ecc-----CCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 63 SPLPSVFWTQEG--SQVL--MFP-----GNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 63 ~~~~~v~W~~~~--~~~~--~~~-----~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.+.+.+.|+|.. .... ... .....+.... ....|.|.+++.+|+|.|+|.+.+..
T Consensus 165 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 231 (256)
T 3umt_A 165 DIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASS 231 (256)
T ss_dssp CCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSS
T ss_pred CCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCC
Confidence 888899999842 2111 100 0011222222 22369999999999999999998753
No 310
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.63 E-value=3.3e-15 Score=110.56 Aligned_cols=128 Identities=17% Similarity=0.230 Sum_probs=91.8
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+..+........+.+..+|.....+.......++.+.+.|.+. +.|++.+.|++++..+...
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 789999999999999998777665554677777777766666666667778888887664 4688899999987644321
Q ss_pred cC-CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 81 PG-NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 81 ~~-~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.. ...........+.|.|.++..+|+|.|+|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~ 216 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLS 216 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEE
Confidence 10 00001112234579999999999999999999988877666655554
No 311
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.63 E-value=4.2e-16 Score=115.07 Aligned_cols=150 Identities=17% Similarity=0.179 Sum_probs=93.1
Q ss_pred CCeEEeCCCCce--ecCCCeEEEEeEeccC---CC-CceEEEeCCeeCCCCCccE-EEc------CCCcEEEEeeecCCC
Q psy15128 136 PPIVQVGPSNQT--LPLHSVAFLPCQAVGS---PP-PHIRWYKNGNSLPPEDTRI-NVS------SSGSLQIDVLRDDFR 202 (292)
Q Consensus 136 ~~~~~~~~~~~~--~~~g~~v~l~C~~~~~---p~-~~~~W~~~~~~l~~~~~~~-~~~------~~~~l~i~~~~~~d~ 202 (292)
+|.+.+.+.... +.+|+.++|.|.+.+. |. +.+.|+|++..+....... ... ..+.|.|.++..+|+
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 88 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSG 88 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCC
Confidence 344444444444 7899999999999876 33 6899999998765421100 011 123577777777777
Q ss_pred CCC--------------------------cceEEe-------CCCceEEEeeCCCC-CCCC-eEEEeEcCeEeccCCCce
Q psy15128 203 AEP--------------------------KDTRVA-------SGETALLECGPPKG-QPEP-TLHWKKNGQFIDLESSKR 247 (292)
Q Consensus 203 g~~--------------------------~~~~~~-------~g~~~~l~C~~~~~-~p~~-~~~W~~~g~~~~~~~~~~ 247 (292)
|.| +.+.+. .|+.++|.|.+ .| +|++ .+.|+++|..+.......
T Consensus 89 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 89 KEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLV-VGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp CCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEE-EEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEE-EeeeCCCcEEEEEECCEeccCceecc
Confidence 722 111111 38899999999 56 6765 999999999874211112
Q ss_pred EEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 248 VSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.....++.+... ..|.+......|.|.|+|.|.|.....
T Consensus 168 ~~~~~~gt~~~~--s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 168 PVLDSDGSYFIY--SKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp CEECTTSCEEEE--EEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred cEECCCCCEEEE--EEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 222344433321 234444445556999999999987654
No 312
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.63 E-value=2e-15 Score=110.53 Aligned_cols=129 Identities=14% Similarity=0.176 Sum_probs=77.1
Q ss_pred ecCCcEEEEEEEeeeC----CCeeEEEECCeEEeeccCCCcc---eeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 49 GLNGIASFQCVAEGSP----LPSVFWTQEGSQVLMFPGNAYG---HLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 49 ~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
.+|++++|.|.+.+.+ ...+.|+|++..+......... ...+.....|.|.....+|+|.|+|.+.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999998875 2489999999765321100000 00111122344444444569999999999876543
Q ss_pred EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCC
Q psy15128 122 VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLP 178 (292)
Q Consensus 122 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~ 178 (292)
....+.+. .....+|.+.+.+.......|..++|.|.+.+. |. +.+.|+++|.++.
T Consensus 96 ~~~~v~~~-~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 96 IEKTISKA-KGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp EEEEECCC-CSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eEEEeccC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 33333210 011223444433332222356669999999885 44 4899999998765
No 313
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=2e-15 Score=113.65 Aligned_cols=116 Identities=18% Similarity=0.234 Sum_probs=81.5
Q ss_pred cccCCcCCCeeEEEEEEecccc-cccccEEEEEeCC---------------CcEEeCCCccEEecCCcEEEEEEEeeeCC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE-RETKPALLTVHAP---------------PSFVVRPQDQKVGLNGIASFQCVAEGSPL 65 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 65 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|..+ +.+...+....+.+|++++|.|.+.+.+.
T Consensus 85 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 164 (247)
T 2ghw_B 85 MNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVR 164 (247)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCT
T ss_pred ECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCcc
Confidence 7899999999999999987222 1223367888754 33445566677889999999999999888
Q ss_pred CeeEEEE--CCeEEeec---c----CCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 66 PSVFWTQ--EGSQVLMF---P----GNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 66 ~~v~W~~--~~~~~~~~---~----~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
+.+.|+| ++..+... . .....+.... ....|.|.+++.+|+|.|+|.+.+..
T Consensus 165 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 165 SNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred ceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 8999999 44432110 0 0111222221 23479999999999999999998753
No 314
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.62 E-value=2.2e-15 Score=110.62 Aligned_cols=119 Identities=21% Similarity=0.271 Sum_probs=82.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEECCe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQEGS 75 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~~~ 75 (292)
|.+++.+|+|.|+|.+.+.. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|++++.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 159 (210)
T 3d9a_H 82 LNSVTTEDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 159 (210)
T ss_dssp ECSCCGGGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ECCCCcccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCc
Confidence 78999999999999998753 222236777763 4555544434456789999999999986 877 999999886
Q ss_pred EEeeccCCCc-ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 76 QVLMFPGNAY-GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 76 ~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
.+........ ........+.|.|.++..+| |.|+|.+.|..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 160 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 4311110000 00122334579999988877 99999999988765543
No 315
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.62 E-value=2.9e-15 Score=113.04 Aligned_cols=114 Identities=15% Similarity=0.275 Sum_probs=79.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCC-------------------CcEEeCCCccEEecCCcEEEEEEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAP-------------------PSFVVRPQDQKVGLNGIASFQCVAEG 62 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------------------p~~~~~~~~~~~~~g~~~~l~C~~~~ 62 (292)
|.+++.+|+|.|+|.+.+..+........|.|..+ +.....+....+.+|+.++|.|.+.+
T Consensus 78 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 157 (250)
T 3esu_F 78 ISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSG 157 (250)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCS
T ss_pred EccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecC
Confidence 78999999999999999876554444467888653 23334556677889999999999987
Q ss_pred eC--CCeeEEEEC--CeEEeec------------cCCCcceeEEeee-----cEEEEccCCCCCCeEEEEEEEe
Q psy15128 63 SP--LPSVFWTQE--GSQVLMF------------PGNAYGHLHVTQE-----GTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 63 ~~--~~~v~W~~~--~~~~~~~------------~~~~~~~~~~~~~-----~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
.+ .+.+.|+|+ +..+... ......+.....+ ..|.|.+++.+|+|.|+|.+.+
T Consensus 158 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 158 YAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 65 679999997 3322110 0011123333322 2699999999999999999986
No 316
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.62 E-value=1.4e-15 Score=115.21 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=80.6
Q ss_pred cccCCcCCCeeEEEEEEeccc--------ccccccEEEEEeCCC---------------cEEeCCCccEEecCCcEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG--------ERETKPALLTVHAPP---------------SFVVRPQDQKVGLNGIASFQC 58 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~--------~~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C 58 (292)
|.+++++|+|.|+|.+.+..| ......+.|.|..+| .+...+....+.+|++++|.|
T Consensus 82 I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C 161 (257)
T 1f3r_B 82 MNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSC 161 (257)
T ss_dssp EESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEE
T ss_pred ECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEE
Confidence 789999999999999998743 112233678887653 122334456688999999999
Q ss_pred EEeeeCCCeeEEEE--CCeEEee--ccC-----CCcceeEE---eeecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 59 VAEGSPLPSVFWTQ--EGSQVLM--FPG-----NAYGHLHV---TQEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 59 ~~~~~~~~~v~W~~--~~~~~~~--~~~-----~~~~~~~~---~~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.+.+.+.+.+.|+| ++..+.. ... ....++.. .....|.|.+++.+|+|.|+|.+.|..
T Consensus 162 ~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 162 KGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp ECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred EECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 99888878999999 4443211 000 00122222 123479999999999999999999853
No 317
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.62 E-value=3.1e-16 Score=114.85 Aligned_cols=146 Identities=15% Similarity=0.140 Sum_probs=90.5
Q ss_pred EeCCCCce-ecCCCeEEEEeEeccCC---C-CceEEEeCCeeCCCCCc--cEE-----EcCCCcEEEEeeecCCCCCC--
Q psy15128 140 QVGPSNQT-LPLHSVAFLPCQAVGSP---P-PHIRWYKNGNSLPPEDT--RIN-----VSSSGSLQIDVLRDDFRAEP-- 205 (292)
Q Consensus 140 ~~~~~~~~-~~~g~~v~l~C~~~~~p---~-~~~~W~~~~~~l~~~~~--~~~-----~~~~~~l~i~~~~~~d~g~~-- 205 (292)
...|.... +.+|+.++|.|.+.+.+ . ..+.|++++..+..... ... ......|.|.++..+|+|.|
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 85 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 85 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEE
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEE
Confidence 33444344 78999999999998774 2 47999999877643210 000 01113577777777777722
Q ss_pred ------------------------cceEEe-------CCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCCCceEEecC
Q psy15128 206 ------------------------KDTRVA-------SGETALLECGPPKG-QPE-PTLHWKKNGQFIDLESSKRVSILG 252 (292)
Q Consensus 206 ------------------------~~~~~~-------~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~~~~~~~~~ 252 (292)
+.+.+. .|+.+.|.|.+ .+ +|+ +.+.|+++|+++............
T Consensus 86 ~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 86 RVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMI-TDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp EEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEE-EEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred EEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEE-eeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 111111 38899999998 55 565 499999999987422111222334
Q ss_pred CCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 253 DPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 253 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
++.+... ..|.+......|.|.|+|.|+|.....
T Consensus 165 ~g~~~~~--s~l~i~~~~~~~~g~ytC~a~n~~l~~ 198 (207)
T 2vol_A 165 DGSYFVY--SKLNVQKSNWEAGNTFTCSVLHEGLHN 198 (207)
T ss_dssp TSCEEEE--EEEEEEHHHHSSCCEEEEEEECTTSGG
T ss_pred CCCEEEE--EEEEECHHHcCCCCEEEEEEECCCCCC
Confidence 4433321 234455555567999999999987543
No 318
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.62 E-value=9.7e-15 Score=111.95 Aligned_cols=163 Identities=16% Similarity=0.219 Sum_probs=98.9
Q ss_pred CCccEEecCCcEEEEEEEeee--CCCeeEEEECCe--E---Eeecc---------CCCcceeEEeee-----cEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEGS--Q---VLMFP---------GNAYGHLHVTQE-----GTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~~--~---~~~~~---------~~~~~~~~~~~~-----~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+. +.+.+.|+|... . +.... .....++....+ ..|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 667788999999999999774 557899998431 1 00000 001123333322 37999999
Q ss_pred CCCCCeEEEEEEEeCC-------cC--eeEEEEEEEEeec----------CCCCCeEEeCCCCceecCCCeEEEEeEecc
Q psy15128 102 QKEDAGFFVCSALSVA-------GS--TTVRAFLQVTSVE----------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVG 162 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~-------~~--~~~~~~l~v~~~~----------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 162 (292)
+.+|+|.|+|.+.+.. .. ......|.|.... ..+++.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 9999999999998761 11 1122344443200 012333443444 77889999999999987
Q ss_pred -CC-CCceEEEeC--CeeCC---C--------CCccEEEcCC---CcEEEEeeecCCCCCCc
Q psy15128 163 -SP-PPHIRWYKN--GNSLP---P--------EDTRINVSSS---GSLQIDVLRDDFRAEPK 206 (292)
Q Consensus 163 -~p-~~~~~W~~~--~~~l~---~--------~~~~~~~~~~---~~l~i~~~~~~d~g~~~ 206 (292)
.+ .+.+.|++. +..+. . ...++..... ..|.|.++..+|+|.|.
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 227 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYY 227 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEE
Confidence 33 478999983 22211 0 0122322222 24899999999999654
No 319
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.62 E-value=8.8e-15 Score=109.50 Aligned_cols=116 Identities=18% Similarity=0.233 Sum_probs=80.6
Q ss_pred cccCCcCCCeeEEEEEEecccc----cccccEEEEEeCCC------------cEEeCCCccEEecCCcEEEEEEEeeeCC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE----RETKPALLTVHAPP------------SFVVRPQDQKVGLNGIASFQCVAEGSPL 65 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 65 (292)
|.+++++|+|.|+|.+.+..+. .....+.|.|...+ .+...+....+.+|+.++|.|.+.+.|.
T Consensus 77 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~ 156 (238)
T 2p1y_A 77 LELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAF 156 (238)
T ss_dssp ESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTC
T ss_pred EecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCC
Confidence 7899999999999999987542 11223678886654 4555667778999999999999999888
Q ss_pred CeeEEEECCe-----EEeeccCC----CcceeEEe-----eecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 66 PSVFWTQEGS-----QVLMFPGN----AYGHLHVT-----QEGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 66 ~~v~W~~~~~-----~~~~~~~~----~~~~~~~~-----~~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
+.+.|+|++. .+...... ...+.... ....|.|.+++.+|+|.|+|.+.|..
T Consensus 157 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 157 DYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999999641 11100000 01222222 13479999999999999999999863
No 320
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.61 E-value=9e-17 Score=122.71 Aligned_cols=172 Identities=17% Similarity=0.160 Sum_probs=91.7
Q ss_pred CCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceEEEeCC--eeCC
Q psy15128 101 VQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNG--NSLP 178 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--~~l~ 178 (292)
..+.|.+.|.|.+.+..+.......+. +...+....+.+|++++|.|.+.+ +.+.+.|+|.. ..+.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~-----------v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~ 70 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMK-----------VIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFK 70 (270)
T ss_dssp -------------------------CC-----------CEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEE
T ss_pred chhhhHHHHHHHHhccCCcccccccee-----------EEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcE
Confidence 356788999999987665443332222 222345566889999999999865 67789999832 1100
Q ss_pred ------CC-----C---c-cEEEcC----CCcEEEEeeecCCCCCC--------------------------------cc
Q psy15128 179 ------PE-----D---T-RINVSS----SGSLQIDVLRDDFRAEP--------------------------------KD 207 (292)
Q Consensus 179 ------~~-----~---~-~~~~~~----~~~l~i~~~~~~d~g~~--------------------------------~~ 207 (292)
.. . . ++.... +.+|.|.+++.+|+|.| +.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~ 150 (270)
T 3qib_D 71 FLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPE 150 (270)
T ss_dssp EEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCE
T ss_pred EEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCc
Confidence 00 0 0 333322 34799999999999822 11
Q ss_pred eEE--------eCCCceEEEeeCCCCCCCC-eEEEeEcCeEeccCCCceEE--------ecCCCcccccccccccccccc
Q psy15128 208 TRV--------ASGETALLECGPPKGQPEP-TLHWKKNGQFIDLESSKRVS--------ILGDPWFDSRRSRSIFGSVLG 270 (292)
Q Consensus 208 ~~~--------~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~i~~~~ 270 (292)
..+ ..|+.++|.|.+....|.+ .+.|+++|+++... .... ...++.+.. ...|.+....
T Consensus 151 v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~ 226 (270)
T 3qib_D 151 VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG--VCTDPQPLKEQPALNDSRYAL--SSRLRVSATF 226 (270)
T ss_dssp EEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT--EEECSSCEESCTTSSSCCEEE--EEEEEEEHHH
T ss_pred eEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCC--cccccccccccccCCCCCEEE--EEEEEEcHHH
Confidence 111 1388999999983337766 89999999998532 2111 012332221 2346666666
Q ss_pred ccc-cceeEEEEeeccccc
Q psy15128 271 ALS-DDQWKLIAKNIRNQQ 288 (292)
Q Consensus 271 ~~~-~g~y~C~a~n~~g~~ 288 (292)
.+| .|.|+|.|+|.....
T Consensus 227 ~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 227 WQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp HHSTTCEEEEEEEECCBCT
T ss_pred hccCCCeEEEEEEecCCCC
Confidence 777 999999999987654
No 321
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.61 E-value=7.2e-16 Score=116.04 Aligned_cols=143 Identities=13% Similarity=0.145 Sum_probs=93.7
Q ss_pred CCCCceecCCCeEEEEeEeccCCCCceEEEe----------------CCeeCCCCC--ccEEEcC----CCcEEEEeeec
Q psy15128 142 GPSNQTLPLHSVAFLPCQAVGSPPPHIRWYK----------------NGNSLPPED--TRINVSS----SGSLQIDVLRD 199 (292)
Q Consensus 142 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~----------------~~~~l~~~~--~~~~~~~----~~~l~i~~~~~ 199 (292)
.+....+.+|+.++|.|.+.+.+.+.+.|+| ++....... .++.... ..+|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 86 (246)
T 4dzb_B 7 HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP 86 (246)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCG
T ss_pred CCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCH
Confidence 4455678899999999999888889999998 222222211 2333322 23799999999
Q ss_pred CCCCCC--------------------------------cceEE--------eCCCceEEEeeCCCCCCCC--eEEEeEcC
Q psy15128 200 DFRAEP--------------------------------KDTRV--------ASGETALLECGPPKGQPEP--TLHWKKNG 237 (292)
Q Consensus 200 ~d~g~~--------------------------------~~~~~--------~~g~~~~l~C~~~~~~p~~--~~~W~~~g 237 (292)
+|+|.| +...+ .+|+.++|.|.+ .+.|++ .+.|+++|
T Consensus 87 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~-~g~~p~~~~v~W~k~g 165 (246)
T 4dzb_B 87 EDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLA-TGFYPDHVELSWWVNG 165 (246)
T ss_dssp GGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEE-EEEBSSCEEEEEEETT
T ss_pred HHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEE-ccCcCCceEEEEEECC
Confidence 999932 01111 127899999998 564443 89999999
Q ss_pred eEeccCCCceEEec--------CCCccccccccccccccccccc-cceeEEEEeecccccc
Q psy15128 238 QFIDLESSKRVSIL--------GDPWFDSRRSRSIFGSVLGALS-DDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 238 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~i~~~~~~~-~g~y~C~a~n~~g~~~ 289 (292)
+.+.. ....... .++.+. ....|.|......| .|.|+|.|+|......
T Consensus 166 ~~l~~--~~~~~~~~~~~~~~~~~g~~~--~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 166 KEVHS--GVCTDPQPLKEQPALNDSRYA--LSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEECT--TEEECSSCEESSTTSTTCCEE--EEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCC--CcccccccccccccCCCCCEE--EEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 99852 2221111 122222 12246677777777 9999999999876643
No 322
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.61 E-value=6.6e-14 Score=103.01 Aligned_cols=135 Identities=19% Similarity=0.335 Sum_probs=87.8
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eE---Eeecc--------CCCcceeEEee-----ecEEEEccCC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQ---VLMFP--------GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~--------~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. +.... .....+..... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4456788999999999998754 4689999863 21 11110 01123444332 2389999999
Q ss_pred CCCCeEEEEEEEeCCcC---eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCeeC
Q psy15128 103 KEDAGFFVCSALSVAGS---TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGNSL 177 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~~l 177 (292)
.+|+|.|.|.+.+..+. ......|.|......+|.+....+. ..+..|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG-CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC-SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC-hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 99999999999876421 1123455554322122333333333 335789999999999876 777 89999998764
Q ss_pred C
Q psy15128 178 P 178 (292)
Q Consensus 178 ~ 178 (292)
.
T Consensus 166 ~ 166 (215)
T 1c5d_H 166 D 166 (215)
T ss_dssp S
T ss_pred c
Confidence 3
No 323
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.61 E-value=3.4e-15 Score=112.81 Aligned_cols=125 Identities=18% Similarity=0.227 Sum_probs=81.8
Q ss_pred cccCCcCCCeeEEEEEEecc---cccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEee-eCCC-eeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV---GERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEG-SPLP-SVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~---~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.+.. .......+.|.|. .+|.+...+....+..|+.++|.|.+.+ .|.+ .+.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 162 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe
Confidence 78999999999999998753 1122233678886 3455554444445667999999999988 5656 899999
Q ss_pred CCeEEeeccC--CCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 73 EGSQVLMFPG--NAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 73 ~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
++..+..... .... ..+...+.|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 163 ~~~~~~~~~~~~~~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 163 GSLSSGVHTFPAVLQS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp GTBCTTEEECCCEEET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred CCeecceEeCCccccC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 8863211000 0001 123334689999999999 9999999998877665555443
No 324
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=3.4e-16 Score=115.10 Aligned_cols=117 Identities=18% Similarity=0.211 Sum_probs=82.3
Q ss_pred cccCCcCCCeeEEEEEEeccc--ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee-CC-CeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG--ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS-PL-PSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+... ......+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |. +.+.|+++
T Consensus 73 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 152 (212)
T 1nfd_E 73 ISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKAN 152 (212)
T ss_dssp ETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEET
T ss_pred ECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEEC
Confidence 789999999999999996322 122233667774 45666655555555689999999999887 54 79999999
Q ss_pred CeEEeeccCCC----cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 74 GSQVLMFPGNA----YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 74 ~~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
+..+....... .... ....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 153 g~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 153 GATINDGVKTTKPSKQGQN-YMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp TEEECSSCBCCCCBCSSSC-EEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CeEcCCCeecCCceecCCC-ceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 98764221000 0111 223456999999999999999999997654
No 325
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=7.3e-15 Score=110.09 Aligned_cols=114 Identities=16% Similarity=0.243 Sum_probs=80.9
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC------cEEeCCCccEEecCCcEEEEEEEeeeC--CCeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP------SFVVRPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~ 73 (292)
|.+++++|+|.|+|.+.+..+......+.|.|..++ .+...+....+.+|+.++|.|.+.+.| .+.+.|+|+
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 79 IDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 789999999999999998765534444788887643 244456677889999999999998876 458999995
Q ss_pred C--eEEe----ec--------cCCCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEe
Q psy15128 74 G--SQVL----MF--------PGNAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 74 ~--~~~~----~~--------~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
. .... .. ......+..... ...|.|.+++.+|+|.|+|.+.+
T Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 159 RPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 2 2111 00 000112233322 24799999999999999999984
No 326
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.61 E-value=5.8e-15 Score=111.55 Aligned_cols=138 Identities=23% Similarity=0.351 Sum_probs=86.4
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e--EEee-ccCCC-------cc-eeEEeeecE--EEEccCCCCCC
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S--QVLM-FPGNA-------YG-HLHVTQEGT--LRIQGVQKEDA 106 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~--~~~~-~~~~~-------~~-~~~~~~~~~--l~i~~~~~~d~ 106 (292)
.+....+.+|++++|.|.+.+.+.+.+.|+|.. . .... ..... .. ++....... |.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~Ds 86 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG 86 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSC
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhC
Confidence 455677889999999999888788899999831 1 1111 11100 01 232222222 99999999999
Q ss_pred eEEEEEEEeCCc---C---eeEEEEEEEEeec-CCCCCeEEe-CCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCee
Q psy15128 107 GFFVCSALSVAG---S---TTVRAFLQVTSVE-DTPPPIVQV-GPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGNS 176 (292)
Q Consensus 107 g~Y~C~~~~~~~---~---~~~~~~l~v~~~~-~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~~ 176 (292)
|.|+|.+.+..+ . ......+.|.... ...+|.+.+ .+....+..|+.++|.|.+.+ +|.+ .+.|+++|.+
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~ 166 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEE
Confidence 999999986533 1 1112344444211 112333333 233333445789999999988 4666 7999999998
Q ss_pred CCC
Q psy15128 177 LPP 179 (292)
Q Consensus 177 l~~ 179 (292)
+..
T Consensus 167 l~~ 169 (253)
T 3to4_D 167 VHS 169 (253)
T ss_dssp ECT
T ss_pred CCC
Confidence 865
No 327
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=5.7e-16 Score=115.68 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=80.6
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee-CC-CeeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS-PL-PSVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...+.......|+.++|.|.+.+. |. +.+.|+++
T Consensus 95 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 174 (234)
T 2j6e_L 95 ISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKAD 174 (234)
T ss_dssp EESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEET
T ss_pred ECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEEC
Confidence 7899999999999999987662 22222566663 34554443333334468899999999885 43 38999999
Q ss_pred CeEEeecc----CCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 74 GSQVLMFP----GNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 74 ~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
+..+.... ............+.|.|.++..+|.|.|+|.+.|......
T Consensus 175 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 175 GAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp TEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred CEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 98763110 0000011112234789999999999999999999866533
No 328
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.61 E-value=4.7e-15 Score=95.76 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=72.8
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .............|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES--SKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC--CCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 4567777778889999999999999999999999999999876321 11111111122479999999999999999999
Q ss_pred eCCcCeeEEEEEEEE
Q psy15128 115 SVAGSTTVRAFLQVT 129 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~ 129 (292)
|..|.......|.|.
T Consensus 85 N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 85 NYKGEASDYATLDVT 99 (103)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999888777777765
No 329
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.60 E-value=5.7e-16 Score=115.35 Aligned_cols=137 Identities=20% Similarity=0.263 Sum_probs=87.4
Q ss_pred eCCCccEEecCCcEEEEEEEeee-CC-C-eeEEEECCeEE-eeccCCC--cceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGS-PL-P-SVFWTQEGSQV-LMFPGNA--YGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~-~~-~-~v~W~~~~~~~-~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
..+....+.+|+.++|.|.+.+. |. + .+.|++++..+ ....... .....+.....|.|.++..+|.|.|+|.+.
T Consensus 18 ~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~ 97 (231)
T 2w59_A 18 IPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQ 97 (231)
T ss_dssp ECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred eCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEE
Confidence 44555567789999999999885 53 4 99999988765 1110000 000111234579999999999999999999
Q ss_pred eCCcCeeEEEEEEEEee-cCCCCCeEEe-CCCCceecCCCeEEEEeEeccC-C-CCceEEEeCCeeCCCC
Q psy15128 115 SVAGSTTVRAFLQVTSV-EDTPPPIVQV-GPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWYKNGNSLPPE 180 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~-~~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~l~~~ 180 (292)
+..+..... +.+... ....+|.+.+ .+....+ .+..++|.|.+.++ | .+.+.|+++|.++...
T Consensus 98 ~~~~~~~~~--~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 164 (231)
T 2w59_A 98 HEELPLPLS--KSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPAT 164 (231)
T ss_dssp CTTCSSCEE--EEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred cCCCCCceE--EEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCc
Confidence 876543333 233211 0112344433 3333333 35679999999886 4 3689999999988653
No 330
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=112.85 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=81.2
Q ss_pred cccCCcCCCeeEEEEEEec-----------ccccccccEEEEEeC---------------CCcEEeCCCccEEecCCcEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNM-----------VGERETKPALLTVHA---------------PPSFVVRPQDQKVGLNGIAS 55 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~-----------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~ 55 (292)
|.+++.+|+|.|.|.+.+. ........+.|.|.. ++.+...+....+.+|++++
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~ 168 (256)
T 3juy_B 89 LRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERAT 168 (256)
T ss_dssp ECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEE
T ss_pred ECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEE
Confidence 7899999999999999986 122223337888876 34566677788899999999
Q ss_pred EEEEEeeeCC-CeeEEEEC--CeEEe--eccC-----CCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 56 FQCVAEGSPL-PSVFWTQE--GSQVL--MFPG-----NAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 56 l~C~~~~~~~-~~v~W~~~--~~~~~--~~~~-----~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
|.|.+.+.+. +.+.|+|. +.... .... ....+.... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 169 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 169 FSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp EEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCS
T ss_pred EEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeC
Confidence 9999988765 79999983 22111 1100 011222222 2336999999999999999999874
No 331
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.60 E-value=2.1e-14 Score=91.89 Aligned_cols=90 Identities=30% Similarity=0.444 Sum_probs=71.0
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..+.....+ ..|.|.+++.+|+|.|+|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD----QRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB----TTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC----CCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence 566777777888999999999999999999999999999876421 112222222 2799999999999999999
Q ss_pred EEeCCcCeeEEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~ 129 (292)
+.|..|.....+.|.|.
T Consensus 81 a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 81 AVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCceeEEEEEEEE
Confidence 99998887777776664
No 332
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.60 E-value=9.4e-15 Score=111.83 Aligned_cols=115 Identities=14% Similarity=0.276 Sum_probs=79.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC--------------cEEeCCCccEEecCCcEEEEEEEeeeC--C
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP--------------SFVVRPQDQKVGLNGIASFQCVAEGSP--L 65 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p--------------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~ 65 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+| .....+....+.+|++++|.|.+.+.+ .
T Consensus 86 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~ 165 (276)
T 3auv_A 86 ISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISD 165 (276)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGG
T ss_pred EccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCC
Confidence 789999999999999998765434444677776543 223345567888999999999998765 5
Q ss_pred CeeEEEECC--eEEe-e---c--------cCCCcceeEEeee-----cEEEEccCCCCCCeEEEEEEEeC
Q psy15128 66 PSVFWTQEG--SQVL-M---F--------PGNAYGHLHVTQE-----GTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 66 ~~v~W~~~~--~~~~-~---~--------~~~~~~~~~~~~~-----~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
+.+.|+|++ .... . . ......+.....+ ..|.|.+++.+|+|.|+|.+.|.
T Consensus 166 ~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 166 YWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp SEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 799999963 2111 0 0 0111233333322 37999999999999999999987
No 333
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.60 E-value=1.1e-15 Score=113.80 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=93.3
Q ss_pred EEeCCCCceecCCCeEEEEeEeccC-CC-C-ceEEEeCCeeC-CCCCccEEEcCCC------cEEEEeeecCCCCCC---
Q psy15128 139 VQVGPSNQTLPLHSVAFLPCQAVGS-PP-P-HIRWYKNGNSL-PPEDTRINVSSSG------SLQIDVLRDDFRAEP--- 205 (292)
Q Consensus 139 ~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~-~~~W~~~~~~l-~~~~~~~~~~~~~------~l~i~~~~~~d~g~~--- 205 (292)
....|....+.+|+.++|.|.+.+. |. + .+.|+++|..+ ...........++ .|.|.++..+|+|.|
T Consensus 16 ~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~ 95 (231)
T 2w59_A 16 YAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCT 95 (231)
T ss_dssp EEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred EEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEE
Confidence 3455666667899999999999885 63 4 89999999877 3322222222333 366666666676622
Q ss_pred -----------------------cceEEe-------CCCceEEEeeCCCC-CC-CCeEEEeEcCeEeccCCCce--EEec
Q psy15128 206 -----------------------KDTRVA-------SGETALLECGPPKG-QP-EPTLHWKKNGQFIDLESSKR--VSIL 251 (292)
Q Consensus 206 -----------------------~~~~~~-------~g~~~~l~C~~~~~-~p-~~~~~W~~~g~~~~~~~~~~--~~~~ 251 (292)
+.+.+. .+..++|.|.+ .+ +| .+.|.|+++|+.+....... ....
T Consensus 96 ~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 174 (231)
T 2w59_A 96 VQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLV-RGFRPRDIEIRWLRDHRAVPATEFVTTAVLPE 174 (231)
T ss_dssp EECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEE-EEEBSSCCEEEEEETTEECCGGGCEECCCEEC
T ss_pred EEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEE-EeccCCCcEEEEEECCEECCCcccccCccccC
Confidence 112221 14579999999 55 45 37999999999985332111 1111
Q ss_pred --------CC-CccccccccccccccccccccceeEEEEeeccccc
Q psy15128 252 --------GD-PWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 252 --------~~-~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+ +.+. ....|.|......|.|.|+|.|.|.....
T Consensus 175 ~~~~~~~~~d~gt~~--~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 175 ERTANGAGGDGDTFF--VYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp CTTSCC---CCCCEE--EEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred cccccccCCCCCeEE--EEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 22 3332 22356677777778999999999988653
No 334
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=2.1e-14 Score=94.41 Aligned_cols=91 Identities=21% Similarity=0.287 Sum_probs=72.7
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+.... ....|.|.+++.+|+|.|+|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~-----~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 80 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES-----EHMKVENSENGSKLTILAARQEHCGCYTL 80 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS-----SSEEEEECSSEEEEEETTCCTTTCEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC-----CCEEEEEcCCEEEEEECCCChhcCEEEEE
Confidence 3567777777889999999999999999999999999998765311 122222 24589999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEEe
Q psy15128 112 SALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~~ 130 (292)
.+.|..|.....+.|.|..
T Consensus 81 ~a~N~~g~~~~~~~l~V~~ 99 (114)
T 2cqv_A 81 LVENKLGSRQAQVNLTVVD 99 (114)
T ss_dssp EEECSSCEEECCEEEEEEC
T ss_pred EEEECCCcEEEEEEEEEEC
Confidence 9999988777777777654
No 335
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=95.16 Aligned_cols=91 Identities=25% Similarity=0.407 Sum_probs=72.1
Q ss_pred EeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEE
Q psy15128 33 VHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 33 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..........|.|.++..+|+|.|+|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~-----~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA-----RSTCEAGVAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSC-----CCEEETTEEEEEECSCCTTCCBCEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc-----ceEeeCCeEEEEECCCChhhCEEEEEE
Confidence 445677777788888999999999999999999999999998765311 112223345899999999999999999
Q ss_pred EEeCCcCeeEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQV 128 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v 128 (292)
+.|..|.....+.|.|
T Consensus 83 a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 83 AENALGQVSCSAWVTV 98 (99)
T ss_dssp EECSSCEEEEECCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999887766665554
No 336
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.60 E-value=6.5e-15 Score=111.54 Aligned_cols=115 Identities=19% Similarity=0.298 Sum_probs=79.4
Q ss_pred cccCCcCCCeeEEEEEEeccc---ccccccEEEEEeCC--------------CcEEeCCCccEEecCCcEEEEEEEeeeC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG---ERETKPALLTVHAP--------------PSFVVRPQDQKVGLNGIASFQCVAEGSP 64 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~---~~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 64 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|..+ +.+...+....+.+|++++|.|.+.+.+
T Consensus 90 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 169 (257)
T 3gkz_A 90 LKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSV 169 (257)
T ss_dssp ECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCC
T ss_pred ECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCc
Confidence 789999999999999998621 11223367888764 4555666778899999999999998877
Q ss_pred CC-eeEEEEC--CeEEe--eccC-----CCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 65 LP-SVFWTQE--GSQVL--MFPG-----NAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 65 ~~-~v~W~~~--~~~~~--~~~~-----~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+ .+.|+|. +.... .... ....+.... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 170 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 234 (257)
T 3gkz_A 170 SSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSS 234 (257)
T ss_dssp CGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred cceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccC
Confidence 76 8999984 22111 1000 001222222 2236999999999999999999864
No 337
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.60 E-value=9.1e-15 Score=108.04 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=82.0
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CC--CeeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PL--PSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~--~~v~W~~ 72 (292)
|.+++++|+|.|.|.+.+..+. .....+.|.|.. +|.+...+ ...+..|+.++|.|.+.+. |. +.+.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 7899999999999999986442 122337888874 34444433 3345689999999999886 66 6899999
Q ss_pred CCeEEeeccCCC--cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 73 EGSQVLMFPGNA--YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 73 ~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
++..+....... .....+...+.|.|.+...+|.|.|+|.+.|..+...
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 886542111100 0111122234689999999999999999999876543
No 338
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.60 E-value=5.2e-15 Score=97.57 Aligned_cols=93 Identities=32% Similarity=0.543 Sum_probs=74.3
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee----cEEEEccCCCCCCeEE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE----GTLRIQGVQKEDAGFF 109 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~d~g~Y 109 (292)
..+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+... ..+.....+ ..|.|.+++.+|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~----~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN----TDRISLYQDNTGRVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC----BTTEEEEECTTCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC----CCeEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 34677888888899999999999999999999999999999876421 122222222 2799999999999999
Q ss_pred EEEEEeCCcCeeEEEEEEEEe
Q psy15128 110 VCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 110 ~C~~~~~~~~~~~~~~l~v~~ 130 (292)
+|.+.|..|.....+.|.|..
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEEEEeC
Confidence 999999988877777777764
No 339
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.59 E-value=9.3e-15 Score=110.63 Aligned_cols=116 Identities=20% Similarity=0.310 Sum_probs=77.0
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeCCCc--------------------EEeCCCccEEecCCcEEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHAPPS--------------------FVVRPQDQKVGLNGIASFQCV 59 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~~p~--------------------~~~~~~~~~~~~g~~~~l~C~ 59 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|..++. ....+....+.+|++++|.|.
T Consensus 78 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 157 (256)
T 3ux9_B 78 ITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCA 157 (256)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEE
T ss_pred ECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEE
Confidence 7899999999999999986432 222337788876541 222334456889999999999
Q ss_pred EeeeC--CCeeEEEEC--CeEEee----ccC--------CCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 60 AEGSP--LPSVFWTQE--GSQVLM----FPG--------NAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 60 ~~~~~--~~~v~W~~~--~~~~~~----~~~--------~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
+.+.+ .+.+.|+|+ +..... ... ....+..... ...|.|.+++.+|+|.|+|.+.+..
T Consensus 158 ~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 158 ASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 98765 679999986 322210 000 0112332222 2359999999999999999999853
No 340
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=1.9e-14 Score=92.15 Aligned_cols=92 Identities=28% Similarity=0.386 Sum_probs=71.5
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCccee-EEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHL-HVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ...... .......|.|.+++.+|+|.|+|.+.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERS--DRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCC--CCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 466777777888999999999999999999999999999876421 111110 11223479999999999999999999
Q ss_pred eCCcCeeEEEEEEEE
Q psy15128 115 SVAGSTTVRAFLQVT 129 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~ 129 (292)
|..|.....+.|.|.
T Consensus 83 N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQ 97 (99)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCcEEEEEEEEEe
Confidence 998887777777664
No 341
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=93.34 Aligned_cols=91 Identities=33% Similarity=0.619 Sum_probs=74.5
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...+.....++.|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPG----RDPRATIQEQGTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESS----SCSSCEECTTCCEEEESCCTTTCCEEEEEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCC----CCCCEEEcCCCEEEEccCCcccCEEEEEEEE
Confidence 467777788888899999999999999999999999999887641 1223334456689999999999999999999
Q ss_pred eCCcCeeEEEEEEEE
Q psy15128 115 SVAGSTTVRAFLQVT 129 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~ 129 (292)
|..|.....+.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 83 SSSGETSWSAVLDVT 97 (100)
T ss_dssp CSSCCCBCCEEEEEE
T ss_pred cCCCCEEEEEEEEEe
Confidence 998887777777765
No 342
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.59 E-value=4.4e-15 Score=112.07 Aligned_cols=134 Identities=16% Similarity=0.292 Sum_probs=78.8
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--eEE--ee-c-c--------CCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--SQV--LM-F-P--------GNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~~~--~~-~-~--------~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. ... .. . . .....++.... ...|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 3356788999999999998764 5689999853 111 10 0 0 01123443332 348999999
Q ss_pred CCCCCeEEEEEEEeCCcC---------e--e--EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-
Q psy15128 102 QKEDAGFFVCSALSVAGS---------T--T--VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP- 166 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~---------~--~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~- 166 (292)
+.+|+|.|.|.+.+..+. . . ....|.|... ...+|.+........+..|+.++|.|.+.+. |.+
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~-~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi 165 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA-STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 165 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS-CCBCCEECCCCC-----------CCCEEEEEBSSCC
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC-CCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCc
Confidence 999999999999986531 1 1 1234555421 1123444333323345689999999999876 766
Q ss_pred ceEEEeCCeeC
Q psy15128 167 HIRWYKNGNSL 177 (292)
Q Consensus 167 ~~~W~~~~~~l 177 (292)
.+.|++++..+
T Consensus 166 ~v~W~k~g~~~ 176 (257)
T 3bn9_D 166 TVSWNSGALTS 176 (257)
T ss_dssp EEEETTTTCCS
T ss_pred EEEEeeCCCcC
Confidence 89999998764
No 343
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.59 E-value=4.4e-15 Score=96.78 Aligned_cols=98 Identities=24% Similarity=0.485 Sum_probs=66.6
Q ss_pred EEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeE
Q psy15128 29 ALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGF 108 (292)
Q Consensus 29 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 108 (292)
+.|.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ...........|.|.+++.+|+|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~----~~~~~~~~~~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED----SGIVLKDGNRNLTIRRVRKEDEGL 78 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCB----TTEEEETTTTEEEECSCCGGGCEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccC----CCeEEeCCCcEEEEeecCcccCEE
Confidence 5566777888888888889999999999999999999999999998765321 111222335689999999999999
Q ss_pred EEEEEEeCCcCeeEEEEEEEEe
Q psy15128 109 FVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 109 Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
|+|.+.|..|.....+.|.|..
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEEEEeC
Confidence 9999999999888888877764
No 344
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.59 E-value=2.1e-14 Score=107.68 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=77.7
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc-------------EEeCCCccEEecCCcEEEEEEEeeeC--CC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS-------------FVVRPQDQKVGLNGIASFQCVAEGSP--LP 66 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~~--~~ 66 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..+|. ....+....+.+|++++|.|.+.+.+ .+
T Consensus 75 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~ 154 (242)
T 2znx_A 75 INSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSD 154 (242)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGS
T ss_pred ECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCc
Confidence 7899999999999999987543333347888876552 33333445688999999999998765 46
Q ss_pred eeEEEECC--eEEe--ec---cC------CCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 67 SVFWTQEG--SQVL--MF---PG------NAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 67 ~v~W~~~~--~~~~--~~---~~------~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+.|+|+. .... .. .+ ....+..... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 155 ~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 155 YXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp CEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred ceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 89999853 2211 00 00 0122333322 248999999999999999999873
No 345
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=1.6e-14 Score=92.63 Aligned_cols=91 Identities=26% Similarity=0.451 Sum_probs=71.1
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee--cEEEEccCCCCCCeEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE--GTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~Y~C~~ 113 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......... ..|.|.+++.+|+|.|+|.+
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~---~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDD---LHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCS---SSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCC---cEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 4556666777889999999999999999999999999998764221 111222222 38999999999999999999
Q ss_pred EeCCcCeeEEEEEEEE
Q psy15128 114 LSVAGSTTVRAFLQVT 129 (292)
Q Consensus 114 ~~~~~~~~~~~~l~v~ 129 (292)
.|..|.....+.|.|.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 82 KNRAGEATFTVQLDVL 97 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEE
Confidence 9999887777777665
No 346
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.59 E-value=2.7e-14 Score=105.74 Aligned_cols=122 Identities=12% Similarity=0.186 Sum_probs=81.5
Q ss_pred cccCCcCCCeeEEEEEEeccc---c--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG---E--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFW 70 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~---~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W 70 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 162 (223)
T 1dee_B 83 MNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSW 162 (223)
T ss_dssp ECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEE
T ss_pred ECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEe
Confidence 789999999999999988642 1 122336888873 3444432222335689999999999886 766 9999
Q ss_pred EE-CCeEEeecc-CCC-cceeEEeeecEEEEccCCC--CCCeEEEEEEEeCCcCeeEE
Q psy15128 71 TQ-EGSQVLMFP-GNA-YGHLHVTQEGTLRIQGVQK--EDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 71 ~~-~~~~~~~~~-~~~-~~~~~~~~~~~l~i~~~~~--~d~g~Y~C~~~~~~~~~~~~ 123 (292)
++ ++..+.... ... .....+...+.|.|..... +|.|.|+|.+.|..+.....
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp EETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred EccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 99 776542100 000 0001222345788888876 88999999999987765443
No 347
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.59 E-value=2.3e-14 Score=107.23 Aligned_cols=139 Identities=17% Similarity=0.345 Sum_probs=90.6
Q ss_pred eCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eEE--ee-c-------cCCCcceeEEe----eecEEEEccCCCC
Q psy15128 41 VRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQV--LM-F-------PGNAYGHLHVT----QEGTLRIQGVQKE 104 (292)
Q Consensus 41 ~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~~--~~-~-------~~~~~~~~~~~----~~~~l~i~~~~~~ 104 (292)
..+..+.+.+|++++|.|.+. .+.+.+.|+|.. ... .. . ......++... ....|.|.+++.+
T Consensus 4 q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~ 82 (238)
T 1bec_A 4 QSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPS 82 (238)
T ss_dssp EECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGG
T ss_pred cCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcc
Confidence 345667889999999999985 457799999863 111 10 0 00112233332 2348999999999
Q ss_pred CCeEEEEEEEeCCc---Ce--eEEEEEEEEeec-CCCCCeEE-eCCCCceecCCCeEEEEeEeccC-CCC-ceEEEeCCe
Q psy15128 105 DAGFFVCSALSVAG---ST--TVRAFLQVTSVE-DTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWYKNGN 175 (292)
Q Consensus 105 d~g~Y~C~~~~~~~---~~--~~~~~l~v~~~~-~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~~~~~ 175 (292)
|+|.|.|.+.+..+ .. .....|.|.... ...+|.+. ..+....+..|+.++|.|.+.+. |.+ .+.|+++|.
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 162 (238)
T 1bec_A 83 QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGK 162 (238)
T ss_dssp GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTE
T ss_pred cCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCE
Confidence 99999999987631 11 122345554321 11234443 34555556789999999999876 654 899999999
Q ss_pred eCCCC
Q psy15128 176 SLPPE 180 (292)
Q Consensus 176 ~l~~~ 180 (292)
++...
T Consensus 163 ~~~~~ 167 (238)
T 1bec_A 163 EVHSG 167 (238)
T ss_dssp EECTT
T ss_pred ECCCc
Confidence 88653
No 348
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.59 E-value=5.1e-14 Score=106.31 Aligned_cols=168 Identities=16% Similarity=0.259 Sum_probs=96.4
Q ss_pred CCccEEecCCcEEEEEEEeee--CCCeeEEEECC--e--EEe--ec--------cCCCcceeEEee-----ecEEEEccC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S--QVL--MF--------PGNAYGHLHVTQ-----EGTLRIQGV 101 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~--~~~--~~--------~~~~~~~~~~~~-----~~~l~i~~~ 101 (292)
+....+.+|++++|.|.+.+. +...+.|+|.. . ... .. ......++.... ...|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 345678899999999999763 35689999842 1 111 00 011123343332 235999999
Q ss_pred CCCCCeEEEEEEEeCC----cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEecc-CCCC-ceEEEeCCe
Q psy15128 102 QKEDAGFFVCSALSVA----GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVG-SPPP-HIRWYKNGN 175 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~-~~~W~~~~~ 175 (292)
+.+|+|.|.|.+.+.. ........+.|.. ....+|.+...+....+..|+.++|.|.+.+ +|.+ .+.|++++.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECS-SCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEec-cCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 9999999999998752 1112223455542 2223444443333345667999999999987 5656 799999987
Q ss_pred eCCCCC-ccEE----EcCCCcEEEEeeecCCCCCCcceEEeC
Q psy15128 176 SLPPED-TRIN----VSSSGSLQIDVLRDDFRAEPKDTRVAS 212 (292)
Q Consensus 176 ~l~~~~-~~~~----~~~~~~l~i~~~~~~d~g~~~~~~~~~ 212 (292)
.+.... .... +...+.|.|.....+| |.|....-..
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~ 206 (253)
T 3liz_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHP 206 (253)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEG
T ss_pred ecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEEC
Confidence 432110 0011 1111356666666666 7665444333
No 349
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.59 E-value=6e-15 Score=93.27 Aligned_cols=89 Identities=13% Similarity=0.182 Sum_probs=68.1
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~ 113 (292)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+. .. ...........|.|.++..+|+|.|+|.+
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~--~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 77 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALA--PE--LLVDAKSSTTSIFFPSAKRADSGNYKLKV 77 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCS--TT--SEEEEETTEEEEECTTBCGGGCEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccC--Cc--EEEEecCCEEEEEECCCChhcCEEEEEEE
Confidence 466655667778899999999999999999999999998 6542 11 11111123457999999999999999999
Q ss_pred EeCCcCeeEEEEEEE
Q psy15128 114 LSVAGSTTVRAFLQV 128 (292)
Q Consensus 114 ~~~~~~~~~~~~l~v 128 (292)
.|..|.....+.|.|
T Consensus 78 ~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 78 KNELGEDEAIFEVIV 92 (93)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEE
Confidence 999987766666554
No 350
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.59 E-value=1e-14 Score=112.04 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=80.0
Q ss_pred cccCCcCCCeeEEEEEEecccc----cccccEEEEEeCCC---------------cEEeCCCccEEecCCcEEEEEEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE----RETKPALLTVHAPP---------------SFVVRPQDQKVGLNGIASFQCVAEG 62 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~ 62 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|..+| .+...+....+.+|++++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 7899999999999999987651 12233678887643 3444566677899999999999988
Q ss_pred eCCCeeEEEE--CCeEEee--c-c----CCCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 63 SPLPSVFWTQ--EGSQVLM--F-P----GNAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 63 ~~~~~v~W~~--~~~~~~~--~-~----~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+ +.+.|+| ++..+.. . . .....++... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 189 ~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 253 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSS 253 (282)
T ss_dssp CC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeC
Confidence 88 8999999 4443211 0 0 0011222221 2347999999999999999999864
No 351
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.59 E-value=3.7e-14 Score=90.78 Aligned_cols=89 Identities=27% Similarity=0.522 Sum_probs=71.2
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+..... ...|.|.++..+|+|.|+|.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQ-----GGKYKLSEDKGGFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCS-----SSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcC-----CCCEEEEEeCCEEEEEECCCCcccCEEEEEE
Confidence 56667777788899999999999999999999999999987631 12222222 23799999999999999999
Q ss_pred EEeCCcCeeEEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~ 129 (292)
+.|..|.......|.|.
T Consensus 81 a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 81 VKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEeEEEEEEEE
Confidence 99998887777777664
No 352
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=4.6e-14 Score=105.81 Aligned_cols=139 Identities=22% Similarity=0.353 Sum_probs=88.8
Q ss_pred EEeCCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--eE---Eeecc---------CCCcceeEEe-----eecEEE
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--SQ---VLMFP---------GNAYGHLHVT-----QEGTLR 97 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~~---~~~~~---------~~~~~~~~~~-----~~~~l~ 97 (292)
+...+..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. +.... .....++... ....|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 3445667788999999999999875 56789999853 11 11111 0022344333 245799
Q ss_pred EccCCCCCCeEEEEEEEeCCc-C------eeEEEEEEEEeecC----CCCCeEEeCCCCceecCCCeEEEEeEeccC-CC
Q psy15128 98 IQGVQKEDAGFFVCSALSVAG-S------TTVRAFLQVTSVED----TPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP 165 (292)
Q Consensus 98 i~~~~~~d~g~Y~C~~~~~~~-~------~~~~~~l~v~~~~~----~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~ 165 (292)
|.+++.+|+|.|.|.+.+... . ......|.|..... .+.+.+ ..+....+..|+.++|.|.+.+. |.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v-~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTI-FLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCC-CCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceE-ECCChhhcccCCCceEEEEEeeEECC
Confidence 999999999999999987531 1 11224555543111 111111 22343446679999999999876 54
Q ss_pred -CceEEEeCCe-eCC
Q psy15128 166 -PHIRWYKNGN-SLP 178 (292)
Q Consensus 166 -~~~~W~~~~~-~l~ 178 (292)
+.+.|++++. .+.
T Consensus 163 ~~~v~W~~~~~~~l~ 177 (242)
T 1hxm_B 163 VIKIHWEEKKSNTIL 177 (242)
T ss_dssp CEEEEEEESSSCCCC
T ss_pred CeEEEEEcCCCEeec
Confidence 6899999987 553
No 353
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.59 E-value=1.1e-14 Score=108.22 Aligned_cols=121 Identities=20% Similarity=0.267 Sum_probs=79.7
Q ss_pred cccCCcCCCeeEEEEEEeccc------c--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-e
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG------E--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-S 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~ 67 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 84 ITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp ECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCE
T ss_pred EcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEE
Confidence 789999999999999998654 1 122237888873 4555443333346789999999999886 777 9
Q ss_pred eEEEECCeEEeec--cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEE
Q psy15128 68 VFWTQEGSQVLMF--PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA 124 (292)
Q Consensus 68 v~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~ 124 (292)
+.|++++..+... ...... ..+...+.|.|.++..+| |.|+|.+.|..+......
T Consensus 164 v~W~~~~~~~~~~~~~~~~~~-~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAVLQS-DLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp EEEGGGTCCTTEEEEEEEEET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEEeeCCcccCceEcCceeCC-CcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 9999987542100 000000 112234579999988866 999999999887655443
No 354
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.58 E-value=1.2e-14 Score=93.34 Aligned_cols=91 Identities=26% Similarity=0.480 Sum_probs=70.2
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..+..... ...|.|.+++.+|+|.|+|.
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~---~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 81 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE---QGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG---GGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCC---CCEEEEEecCCEEEEEEeecCcccCEEEEEE
Confidence 3455555667788999999999999999999999999988763211 22232322 26899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~ 129 (292)
+.|..+.......|.|.
T Consensus 82 a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEEE
Confidence 99998887777666654
No 355
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.58 E-value=4.2e-15 Score=91.46 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=58.2
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
..+.+.+|+.+.|.|.+ .+ |.|.+.|+|||++|..+ .++.+..++. ...|.|..+..+|+|.|+|.|.|..
T Consensus 4 t~v~~~~G~~v~l~C~v-s~-p~p~v~W~k~g~~l~~~--~~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHL-SG-PGGPVRWYKDGERLASQ--GRVQLEQAGA-----RQVLRVQGARSGDAGEYLCDAPQDS 74 (84)
T ss_dssp CCEEECTTSCEEEECCC-SC-CSTTCEEEETTEECCCC--SSEEEEECSS-----CEEEEESSCSSTTCEEEEEECTTTC
T ss_pred eEEEEecCCCEEEEEEE-CC-CCcEEEEEECCEEcccc--ccEEEeecCC-----eEEEEecCCCCcccEEEEEEECCEE
Confidence 56788999999999998 66 88899999999999643 3444433322 2368999999999999999998876
Q ss_pred ccc
Q psy15128 286 NQQ 288 (292)
Q Consensus 286 g~~ 288 (292)
++.
T Consensus 75 ~~a 77 (84)
T 2lu7_A 75 RIF 77 (84)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 356
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.58 E-value=1.3e-13 Score=100.75 Aligned_cols=227 Identities=15% Similarity=0.207 Sum_probs=133.2
Q ss_pred EEeCCCccEEecCCcEEEEEEEee-eC---CCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEG-SP---LPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~-~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
+...|....+..|+.++|.|.+.+ .| ...++|+|++..+. .....|.+..+...|+|.|+|.+.
T Consensus 5 Vs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~Is------------GaT~tLti~s~t~sdSG~YqCvVT 72 (304)
T 3shs_A 5 VSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHE------------NNTATLTVADATSENAGSYKVTVQ 72 (304)
T ss_dssp EEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECS------------CCSSEEEESSCCGGGCEEEEEEEE
T ss_pred EEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCcccc------------CCcceEEeeeccccCCeEEEEEEE
Confidence 445566777889999999998876 45 34799999997642 124478999999999999999999
Q ss_pred eCCcCeeEEEEEEEEeecCCCCCeEEe-CCCCceecCCCeEEEEeEe--cc-CC-----CCceEEEeCCeeCCCCC----
Q psy15128 115 SVAGSTTVRAFLQVTSVEDTPPPIVQV-GPSNQTLPLHSVAFLPCQA--VG-SP-----PPHIRWYKNGNSLPPED---- 181 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~g~~v~l~C~~--~~-~p-----~~~~~W~~~~~~l~~~~---- 181 (292)
+..+.......+.+... ..+.+.+ .|....+..|..+.|.+.+ .+ .| ..++.|+|++..+....
T Consensus 73 Da~Gcs~tSs~VtVT~~---a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq~lT~ 149 (304)
T 3shs_A 73 DTDTMTSVESEVFLMEE---AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITI 149 (304)
T ss_dssp ETTTCCEEECCCEEECB---CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSSEEEE
T ss_pred ECCCCeeeeeeEEEecc---CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCccccce
Confidence 87776655444444321 1222333 3444455677889998887 43 34 45899999998775431
Q ss_pred ccEEEcCCCcEEEEeeecCCCC-------------------CCcceEEeCCCceEEEeeCC-------CCCCCC--eEEE
Q psy15128 182 TRINVSSSGSLQIDVLRDDFRA-------------------EPKDTRVASGETALLECGPP-------KGQPEP--TLHW 233 (292)
Q Consensus 182 ~~~~~~~~~~l~i~~~~~~d~g-------------------~~~~~~~~~g~~~~l~C~~~-------~~~p~~--~~~W 233 (292)
..+.....|.+++.-- ....+ -.....+..|+.+.|.-.+. .|.|.. .+.|
T Consensus 150 sS~TateaG~YtV~VT-n~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (304)
T 3shs_A 150 QEFTADKNGVYTVKVW-GESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNW 228 (304)
T ss_dssp CSCCGGGCEEEEEEEE-SSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEE
T ss_pred eeEEecCCeEEEEEEE-cCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEE
Confidence 1111233344433321 11111 22445677888888765421 233322 5678
Q ss_pred eE--cCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 234 KK--NGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 234 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
+. +|+.-+..-+..+-..- ..+.......|+.......|...|.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 229 YLQREGQLSPTLIGSEVGEAL-EGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEECTTCCSCEEEESSSEECG-GGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEeecCccCchhhhhhhhhhh-ccceeCCCcceeecccccccchheeeHHH
Confidence 75 34321100000000000 01111222346666777888999999986
No 357
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=111.40 Aligned_cols=143 Identities=22% Similarity=0.366 Sum_probs=93.2
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--eE--Ee-ec-c--------CCCcceeEEee----ecEEEE
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--SQ--VL-MF-P--------GNAYGHLHVTQ----EGTLRI 98 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~~--~~-~~-~--------~~~~~~~~~~~----~~~l~i 98 (292)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|+. .. .. .. . .....+..... ...|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 34555666788999999999999987777899999864 11 11 00 0 01123343332 348999
Q ss_pred ccCCCCCCeEEEEEEEeCCc----Ce--eEEEEEEEEeec-CCCCCeEEe-CCCCceecCCCeEEEEeEeccC-CC-Cce
Q psy15128 99 QGVQKEDAGFFVCSALSVAG----ST--TVRAFLQVTSVE-DTPPPIVQV-GPSNQTLPLHSVAFLPCQAVGS-PP-PHI 168 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~~~----~~--~~~~~l~v~~~~-~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~-p~-~~~ 168 (292)
.+++.+|+|.|+|.+.+..+ .. .....|.|.... ...+|.+.+ .+....+.+|+.++|.|.+.+. |. +.+
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 184 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 184 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEE
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEE
Confidence 99999999999999998421 11 122345554311 112344433 2333445578999999999886 43 689
Q ss_pred EEEeCCeeCCC
Q psy15128 169 RWYKNGNSLPP 179 (292)
Q Consensus 169 ~W~~~~~~l~~ 179 (292)
.|++++.++..
T Consensus 185 ~W~k~g~~l~~ 195 (279)
T 2wbj_D 185 SWWVNGKEVHS 195 (279)
T ss_dssp EEEETTEECCT
T ss_pred EEEECCEECCC
Confidence 99999998865
No 358
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.58 E-value=4.5e-14 Score=106.25 Aligned_cols=115 Identities=15% Similarity=0.230 Sum_probs=78.2
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC-------------cEEeCCCccEEecCCcEEEEEEEeeeC--CC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP-------------SFVVRPQDQKVGLNGIASFQCVAEGSP--LP 66 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~ 66 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..++ .....+....+.+|++++|.|.+.+.+ .+
T Consensus 80 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 159 (247)
T 1svz_A 80 ISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDY 159 (247)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGS
T ss_pred ECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCc
Confidence 789999999999999998754433333778887642 233344445688999999999998864 56
Q ss_pred eeEEEECC--eEEe--e-ccC---------CCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 67 SVFWTQEG--SQVL--M-FPG---------NAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 67 ~v~W~~~~--~~~~--~-~~~---------~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+.|+|+. .... . ... ....+..... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 160 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 160 SMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 89999963 2111 0 000 0122333322 248999999999999999999985
No 359
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.58 E-value=2.6e-14 Score=101.92 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=75.3
Q ss_pred CcccCCcCCCeeEEEEEEeccccccc-ccEEEEEeCC---CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeE
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERET-KPALLTVHAP---PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQ 76 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~-~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~ 76 (292)
.|.+++.+|+|.|+|.+.+..+.... ..+.|.|..+ |.+.. .+..++|.|.+.+.|.+.|.|++++..
T Consensus 69 ~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~ 140 (182)
T 1hnf_A 69 KIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKH 140 (182)
T ss_dssp EECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCE
T ss_pred EECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEE
Confidence 37899999999999999997766432 3367888753 22221 344789999999888889999999876
Q ss_pred EeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 77 VLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
+. . ....|.+.. ..+|.|.|+|.|.|..+.......+
T Consensus 141 l~-~-----------~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 141 LK-L-----------SQRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp EE-E-----------ESSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CC-C-----------CCcEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 51 0 122333332 4789999999999998876655443
No 360
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.58 E-value=7.2e-15 Score=109.00 Aligned_cols=119 Identities=16% Similarity=0.262 Sum_probs=79.5
Q ss_pred cccCCcCCCeeEEEEEEeccc-----c--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-ee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-----E--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SV 68 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v 68 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+........+.+|+.++|.|.+.+. |.+ .+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 162 (225)
T 1op3_H 83 MHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (225)
T ss_dssp ECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEE
T ss_pred ECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEE
Confidence 789999999999999998754 1 122337888875 3444432222235679999999999886 766 99
Q ss_pred EEEECCeEEee--ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 69 FWTQEGSQVLM--FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 69 ~W~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
.|++++..+.. ..............+.|.|.++..+| |.|+|.+.|..+...
T Consensus 163 ~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 163 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp ECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 99998864210 00000000112234578999998888 999999999765544
No 361
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.58 E-value=4.5e-14 Score=101.95 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=84.6
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeee-CC----CeeEEEECCeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGS-PL----PSVFWTQEGSQ 76 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~----~~v~W~~~~~~ 76 (292)
|.+++.+|+|.|.|.+.+..+..... +.|.|..+|........ .+..|+.+ |.|.+.+. |. +.+.|+|++..
T Consensus 63 I~~v~~~d~G~Y~C~a~n~~~~~~~~-~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~ 139 (210)
T 1gsm_A 63 VRNASLSAAGTRVCVGSCGGRTFQHT-VQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQE 139 (210)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEE-EEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEE
T ss_pred ECccCcccCceEEEEEEeCCCceEEE-EEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEE
Confidence 78999999999999999987665444 99999999876543222 56678888 99999885 64 37999999987
Q ss_pred EeeccC-C-----------CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 77 VLMFPG-N-----------AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 77 ~~~~~~-~-----------~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
+..... . ......+...+.|.+.....++.+.|+|.|.+........
T Consensus 140 L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~~ 198 (210)
T 1gsm_A 140 LEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELS 198 (210)
T ss_dssp CTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEEE
T ss_pred cccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCccc
Confidence 632110 0 0011233444567777777788899999999876544433
No 362
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.57 E-value=6e-15 Score=97.03 Aligned_cols=79 Identities=19% Similarity=0.219 Sum_probs=58.0
Q ss_pred CCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccccC
Q psy15128 212 SGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQHG 291 (292)
Q Consensus 212 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~~ 291 (292)
.+..+.|.|.| .|.|.|.|+|+|||++|..+....................|.|..+...|+|.|+|+|+|.+|+++++
T Consensus 14 ~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 14 EMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 56788999998 99999999999999999643333333322100000112358899999999999999999999998653
No 363
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.57 E-value=3e-14 Score=107.77 Aligned_cols=116 Identities=16% Similarity=0.293 Sum_probs=80.9
Q ss_pred cccCCcCCCeeEEEEEEeccccc---ccccEEEEEeC--------------------CCcEEeCCCccEEecCCcEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGER---ETKPALLTVHA--------------------PPSFVVRPQDQKVGLNGIASFQC 58 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~---~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~g~~~~l~C 58 (292)
|.+++++|+|.|+|.+.+..+.. ....+.|.|.. +|.+...+....+.+|+.++|.|
T Consensus 80 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C 159 (256)
T 3tf7_C 80 KASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSC 159 (256)
T ss_dssp ESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECE
T ss_pred ECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEE
Confidence 78999999999999999865421 22236777775 55677777778888999999999
Q ss_pred EEeeeCCCeeEEEECC--eEE--ee-ccCC-------CcceeEE----eeecEEEEccCCCCCCeEEEEEEEeCCc
Q psy15128 59 VAEGSPLPSVFWTQEG--SQV--LM-FPGN-------AYGHLHV----TQEGTLRIQGVQKEDAGFFVCSALSVAG 118 (292)
Q Consensus 59 ~~~~~~~~~v~W~~~~--~~~--~~-~~~~-------~~~~~~~----~~~~~l~i~~~~~~d~g~Y~C~~~~~~~ 118 (292)
.+.+. .+.+.|+|.. ... .. .... ...++.. .....|.|.+++.+|+|.|+|.+.|..+
T Consensus 160 ~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 160 RQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp EECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred EcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 99876 6789999842 111 10 0000 0111111 1234799999999999999999988655
No 364
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.57 E-value=1.7e-14 Score=111.24 Aligned_cols=115 Identities=18% Similarity=0.276 Sum_probs=79.1
Q ss_pred cccCCcCCCeeEEEEEEecc-c---ccccccEEEEEeC----------------CCcEEeCCCccEEecCCcEEEEEEEe
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV-G---ERETKPALLTVHA----------------PPSFVVRPQDQKVGLNGIASFQCVAE 61 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~-~---~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~ 61 (292)
|.+++.+|+|.|+|.+.+.. + ......+.|.|.. ++.+...+....+.+|++++|.|.+.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 184 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSS 184 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEES
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcC
Confidence 78999999999999999864 1 1112236788876 23344456667889999999999998
Q ss_pred eeCCC------eeEEEECC--eEE--eeccC-----CCcceeEEe---eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 62 GSPLP------SVFWTQEG--SQV--LMFPG-----NAYGHLHVT---QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 62 ~~~~~------~v~W~~~~--~~~--~~~~~-----~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
+.+.+ .+.|+|+. ... ..... ....++... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 185 ~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 185 QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYY 257 (291)
T ss_dssp SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 87654 89999963 211 11100 001222222 2347999999999999999999874
No 365
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=6.3e-14 Score=91.05 Aligned_cols=91 Identities=31% Similarity=0.543 Sum_probs=73.2
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeec---EEEEccCCCCCCeEEE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG---TLRIQGVQKEDAGFFV 110 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~Y~ 110 (292)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.....++ .|.|.+++.+|+|.|+
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 85 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA-----SERLSFPADGAEHGLLLTAALPTDAGVYV 85 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-----CSSEECCEETTEEEEEESSCCGGGCEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCC-----CCcEEEEeCCCEEEEEEccCCHHhCEEEE
Confidence 3467777788888999999999999999999999999999887631 1223333333 8999999999999999
Q ss_pred EEEEeCCcCeeEEEEEEEE
Q psy15128 111 CSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v~ 129 (292)
|.+.|..|.......|.|.
T Consensus 86 C~a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 86 CRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEEEEE
Confidence 9999988877777777665
No 366
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.56 E-value=2.6e-14 Score=102.00 Aligned_cols=101 Identities=19% Similarity=0.134 Sum_probs=72.1
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcEEeCCCccEEecCCcEEEEEEE-eeeCCCeeEEEECCeEEeec
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSFVVRPQDQKVGLNGIASFQCVA-EGSPLPSVFWTQEGSQVLMF 80 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~ 80 (292)
|.+++.+|+|.|+|.+.+.. . ....+.|.|..++.. +.....+..++|.|.+ .+ |.+.+.|++++..+.
T Consensus 73 I~~v~~~D~G~Y~C~v~~~~-~-~~~~~~L~V~~~~~~-----P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-- 142 (180)
T 2dru_A 73 IYNVSKEDRGDYYMRMLHET-E-DQWKITMEVYEMVSK-----PMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR-- 142 (180)
T ss_dssp ECSCCGGGCEEEEEEEESSS-E-EEEEEEEEEECCCCC-----CEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE--
T ss_pred EcCCCHHHCeEEEEEEEcCC-e-EEEEEEEEEECCCCC-----CEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc--
Confidence 78999999999999997765 3 333378888764321 1112245679999999 56 889999999998763
Q ss_pred cCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 81 PGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 81 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
...+..|.+.. .+|+|.|+|.|.|..+.....
T Consensus 143 ---------~~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 143 ---------SLRQKTMSYQW--TNLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp ---------EESSSEEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred ---------CCCCCEEEEEE--hhcCccEEEEEecCcCccccc
Confidence 11234566533 789999999999987765443
No 367
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.56 E-value=5.9e-14 Score=91.26 Aligned_cols=92 Identities=26% Similarity=0.308 Sum_probs=68.7
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCC---CeeEEEECCeEEeeccCCCcceeEE---------eeecEEEEccCCC
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPL---PSVFWTQEGSQVLMFPGNAYGHLHV---------TQEGTLRIQGVQK 103 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~---------~~~~~l~i~~~~~ 103 (292)
.|.+...|....+.+|++++|.|.+.+.|. +.+.|+|++.... .. ....+... .....|.|.+++.
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 81 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDL-SS-KVGQHLQLHDSYDRASKVYLFELHITDAQP 81 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEG-GG-GCBTTEEEEEEEETTTTEEEEEEEECSCCG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccc-cc-cCCceEEEeeEEecccccceEEEEEecCCC
Confidence 466777788888999999999999999887 8999999763211 10 00111111 1245899999999
Q ss_pred CCCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 104 EDAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
+|+|.|+|.+.|..|.....+.|.|.
T Consensus 82 ~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 82 AFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999988877777764
No 368
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=1.2e-14 Score=106.32 Aligned_cols=137 Identities=12% Similarity=0.127 Sum_probs=82.0
Q ss_pred cCCCeEEEEeEeccCCC----CceEEEeCCeeCCCCC-ccEEEcCCCcEEEEee---ecCC---CCCC------------
Q psy15128 149 PLHSVAFLPCQAVGSPP----PHIRWYKNGNSLPPED-TRINVSSSGSLQIDVL---RDDF---RAEP------------ 205 (292)
Q Consensus 149 ~~g~~v~l~C~~~~~p~----~~~~W~~~~~~l~~~~-~~~~~~~~~~l~i~~~---~~~d---~g~~------------ 205 (292)
.+|+.++|.|.+.+.++ +.+.|+|++.++.... .......++.|.+... ...| +|.|
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 68999999999987742 4899999998765421 1111223444544331 1222 5521
Q ss_pred --------------cceEEe-------CCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCCCceEEecCCCcccccccc
Q psy15128 206 --------------KDTRVA-------SGETALLECGPPKG-QPE-PTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSR 262 (292)
Q Consensus 206 --------------~~~~~~-------~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (292)
+.+.+. .|..+.|.|.+ .| +|+ +.+.|+++|.++......+.....++.+... .
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~-~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~--s 172 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLV-KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLY--S 172 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEE-EEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEE--E
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEE-eCeECCCeEEEEEECCeeccCccccCceECCCCCEEEE--E
Confidence 111111 25669999998 55 555 4999999999885211112223344433321 2
Q ss_pred ccccccccccccceeEEEEeeccccc
Q psy15128 263 SIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 263 ~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.|.+......|.|.|+|.|.|.....
T Consensus 173 ~l~i~~~~~~~~g~YtC~a~n~~l~~ 198 (207)
T 1l6x_A 173 KLTVDKSRWQQGNVFSCSVMHEALHN 198 (207)
T ss_dssp EEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred EEEECHHHcCCCCEEEEEEEcCCcCC
Confidence 34444445567999999999987643
No 369
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.56 E-value=5.4e-14 Score=104.73 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=79.1
Q ss_pred cccCCcCCCeeEEEEEEeccc--c---cccccEEEEEeC----CCcEEeCCCccEEecC-CcEEEEEEEeee-CCC-eeE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG--E---RETKPALLTVHA----PPSFVVRPQDQKVGLN-GIASFQCVAEGS-PLP-SVF 69 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~--~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-~~~-~v~ 69 (292)
|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+........+..| +.++|.|.+.+. |.+ .+.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~ 161 (232)
T 1dn0_B 82 LSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFS 161 (232)
T ss_dssp ECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEE
T ss_pred ECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEE
Confidence 789999999999999984221 1 122337888875 2444322212234578 999999999886 766 999
Q ss_pred EEE-CCeEEeecc--CCCcceeEEeeecEEEEccCCC--CCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 70 WTQ-EGSQVLMFP--GNAYGHLHVTQEGTLRIQGVQK--EDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 70 W~~-~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~--~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
|++ ++..+.... ............+.|.|.+... +|.|.|+|.+.|..+.......+.
T Consensus 162 W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 162 WKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp EEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECC
T ss_pred EEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecC
Confidence 999 887653200 0000001223345789998887 889999999999887765555443
No 370
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.56 E-value=8.5e-14 Score=105.74 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=78.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCC------------------cE-EeCCCccEEecCCcEEEEEEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPP------------------SF-VVRPQDQKVGLNGIASFQCVAEG 62 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p------------------~~-~~~~~~~~~~~g~~~~l~C~~~~ 62 (292)
|.+++++|+|.|+|.+.+..+......+.|.|..+| .+ ...+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 789999999999999988654333333778887653 22 22333457889999999999987
Q ss_pred eCC--CeeEEEECC--eE---Eee-ccCC--------CcceeEEe-----eecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 63 SPL--PSVFWTQEG--SQ---VLM-FPGN--------AYGHLHVT-----QEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 63 ~~~--~~v~W~~~~--~~---~~~-~~~~--------~~~~~~~~-----~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
.+. +.+.|+|+. .. +.. .... ...+.... ....|.|.+++.+|+|.|+|.+.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 653 789999963 21 110 0100 01222222 1348999999999999999999985
No 371
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.56 E-value=1.4e-14 Score=92.89 Aligned_cols=79 Identities=18% Similarity=0.355 Sum_probs=63.5
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+............++. ..|.|..+...|+|.|+|.|.|.
T Consensus 12 p~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~ 84 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKV-SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL------HSLIFEVVRASDAGAYACVAKNR 84 (100)
T ss_dssp CCCEEEETTCCEEEEEEC-EEESCCEEEEEETTEEECCCSSSCEEEETTTE------EEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEecCCCEEEEEEEE-EeeCCCEEEEEECCEECcCCCcEEEEEcCCCe------EEEEECCCCcccCEEEEEEEEcC
Confidence 456788999999999998 78999999999999998654443444333321 25889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 85 ~g~~~~ 90 (100)
T 2kdg_A 85 AGEATF 90 (100)
T ss_dssp TEEEEE
T ss_pred CCeEEE
Confidence 998754
No 372
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.56 E-value=2.2e-13 Score=101.86 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=82.1
Q ss_pred CCccEEecCCcEEEEEEEeeeC----CCeeEEEECC--e---EEeecc--------------CCCcceeEEeee-----c
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP----LPSVFWTQEG--S---QVLMFP--------------GNAYGHLHVTQE-----G 94 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~----~~~v~W~~~~--~---~~~~~~--------------~~~~~~~~~~~~-----~ 94 (292)
+....+.+|++++|.|.+.+.+ ...+.|+|.. . .+.... .....++....+ .
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 4456788999999999998754 3489999842 1 110011 111234433322 3
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCc-----------C--eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEec
Q psy15128 95 TLRIQGVQKEDAGFFVCSALSVAG-----------S--TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAV 161 (292)
Q Consensus 95 ~l~i~~~~~~d~g~Y~C~~~~~~~-----------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 161 (292)
.|.|.+++.+|+|.|.|.+.+..+ . ......+.|.. .....|.+...+....+..|+.++|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 165 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLVK 165 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC-CCCBCCEEEEECCCCCC--TTEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc-CCCcCCEEEEECCChhhccCCcEEEEEEEe
Confidence 599999999999999999976421 0 11122344432 122344444333434456799999999998
Q ss_pred cC-CCC-ceEEEeCCeeC
Q psy15128 162 GS-PPP-HIRWYKNGNSL 177 (292)
Q Consensus 162 ~~-p~~-~~~W~~~~~~l 177 (292)
+. |.+ .+.|++++..+
T Consensus 166 ~~~p~~~~v~W~~~g~~~ 183 (239)
T 3tv3_H 166 DYFPEPVTVSWNSGALTS 183 (239)
T ss_dssp EEBSSCCEEEEGGGTBCT
T ss_pred eEeCCCeEEEEEECCccC
Confidence 74 544 48899988654
No 373
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.55 E-value=4e-14 Score=107.87 Aligned_cols=115 Identities=19% Similarity=0.332 Sum_probs=75.5
Q ss_pred cccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc-----------------------EEeCCCccEEecCCcEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS-----------------------FVVRPQDQKVGLNGIASFQC 58 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~-----------------------~~~~~~~~~~~~g~~~~l~C 58 (292)
|.+++.+|+|.|+|.+.+..+......+.|.|..++. ....+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 7899999999999999886543233336677764321 12234456788999999999
Q ss_pred EEeeeC--CCeeEEEEC--CeEEe-e--c-----------cCCCcceeEEee-----ecEEEEccCCCCCCeEEEEEEEe
Q psy15128 59 VAEGSP--LPSVFWTQE--GSQVL-M--F-----------PGNAYGHLHVTQ-----EGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 59 ~~~~~~--~~~v~W~~~--~~~~~-~--~-----------~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
.+.+.+ .+.+.|+|+ +.... . . ......+..... ...|.|.+++.+|+|.|+|.+.+
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 998765 368999985 22211 1 0 011223333332 24799999999999999999986
Q ss_pred C
Q psy15128 116 V 116 (292)
Q Consensus 116 ~ 116 (292)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 4
No 374
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.1e-14 Score=95.10 Aligned_cols=92 Identities=21% Similarity=0.403 Sum_probs=72.5
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee--e--cEEEEccCCCCCCeEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ--E--GTLRIQGVQKEDAGFFV 110 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~--~~l~i~~~~~~d~g~Y~ 110 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..+..... + ..|.|.+++.+|+|.|+
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~----~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPK----SDHYTIQRDLDGTCSLHTTASTLDDDGNYT 82 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTT----CSSEEEEECTTCEEEEEESSCCTTTCSCCE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC----CCeEEEEECCCcEEEEEECCCChhhCEEEE
Confidence 4677777777888999999999999999999999999998765321 11222221 2 37999999999999999
Q ss_pred EEEEeCCcCeeEEEEEEEEe
Q psy15128 111 CSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v~~ 130 (292)
|.+.|..|.....+.|.|..
T Consensus 83 C~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 83 IMAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp EEEECTTCCEEECCCEEEEC
T ss_pred EEEEECCCeEEEEEEEEEEC
Confidence 99999999887777777764
No 375
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.55 E-value=4e-13 Score=99.99 Aligned_cols=135 Identities=14% Similarity=0.221 Sum_probs=82.5
Q ss_pred CCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--e--E-Eeecc--------CCCcceeEEee-----ecEEEEccCC
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--S--Q-VLMFP--------GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~--~-~~~~~--------~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. . . +.... .....++.... ...|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 3456788999999999998754 5689999853 1 1 11110 01123444332 2389999999
Q ss_pred CCCCeEEEEEEEeCC--cC----eeEEEEEEEEeecCCCCCeEEe-CCCCceecCC-CeEEEEeEeccC-CCC-ceEEEe
Q psy15128 103 KEDAGFFVCSALSVA--GS----TTVRAFLQVTSVEDTPPPIVQV-GPSNQTLPLH-SVAFLPCQAVGS-PPP-HIRWYK 172 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~--~~----~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~~~g-~~v~l~C~~~~~-p~~-~~~W~~ 172 (292)
.+|+|.|.|.+.+.. +. ......|.|.... ..+|.+.. .+. ..+..| +.++|.|.+.+. |.+ .+.|++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~p~-~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS-ASAPTLFPLVSC-ENSPSDTSSVAVGCLAQDFLPDSITFSWKY 164 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC-CBCCEEEEEECC-------CCSEEEEEEEEEEBSSCCEEEEEE
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCC-CCCCceEEeccc-cccCCCCCcEEEEEEEEEEeCCCeEEEEEc
Confidence 999999999998321 11 1123455554311 12233332 223 234578 999999999876 766 899999
Q ss_pred -CCeeCCC
Q psy15128 173 -NGNSLPP 179 (292)
Q Consensus 173 -~~~~l~~ 179 (292)
+|..+..
T Consensus 165 ~~g~~l~~ 172 (232)
T 1dn0_B 165 KNNSDISS 172 (232)
T ss_dssp TTSCEECC
T ss_pred CCCCceee
Confidence 8887754
No 376
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.55 E-value=7.2e-15 Score=91.89 Aligned_cols=72 Identities=14% Similarity=0.232 Sum_probs=55.7
Q ss_pred EEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 209 RVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 209 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
.+.+|+.+.|.|.+ .+ |.+.+.|+|||++|..+ .++.+..++. ...|.|..+..+|+|.|+|.|.|..++.
T Consensus 17 ~~~~g~~v~l~C~v-~~-p~~~v~W~k~g~~i~~~--~~~~i~~~~~-----~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 87 (91)
T 2lvc_A 17 HAITSECVMLACEV-DR-EDAPVRWYKDGQEVEES--DFVVLENEGP-----HRRLVLPATQPSDGGEFQCVAGDECAYF 87 (91)
T ss_dssp ECCTTCCEEEEEEC-SC-TTSCCEEEETTSCCCCC--SSCEEEEETT-----EEEEEESSCCGGGCSEEEEECSSCEEEE
T ss_pred EEECCCcEEEEEEE-CC-CCcEEEEEECCEEeeee--eeeeEEecCC-----eEEEEeCCCChhhcEEEEEEEcceEEEE
Confidence 45689999999998 55 77899999999999643 3333333321 2368999999999999999999987765
Q ss_pred c
Q psy15128 289 Q 289 (292)
Q Consensus 289 ~ 289 (292)
.
T Consensus 88 ~ 88 (91)
T 2lvc_A 88 T 88 (91)
T ss_dssp E
T ss_pred E
Confidence 4
No 377
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.55 E-value=4.6e-14 Score=98.03 Aligned_cols=97 Identities=29% Similarity=0.433 Sum_probs=77.1
Q ss_pred EEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe----eecEEEEccCCCC
Q psy15128 29 ALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT----QEGTLRIQGVQKE 104 (292)
Q Consensus 29 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~ 104 (292)
..+.+..+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.. ..+.... ....|.|.+++..
T Consensus 34 ~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~-----~~~~~~~~~~~~~~~L~I~~v~~~ 108 (154)
T 1fhg_A 34 AEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKE-----SRHFQIDYDEEGNCSLTISEVCGD 108 (154)
T ss_dssp CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-----SSSEEEEECTTCEEEEEESSCCGG
T ss_pred hcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCC-----CCcEEEEECCCCeEEEEECCCChh
Confidence 334445678888888888999999999999999999999999999987631 1122221 2348999999999
Q ss_pred CCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 105 DAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
|.|.|+|.+.|..|.....+.|.|..
T Consensus 109 D~G~Y~C~a~N~~G~~~~~~~l~V~~ 134 (154)
T 1fhg_A 109 DDAKYTCKAVNSLGEATCTAELLVET 134 (154)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCEEEEEEEEECCCeEEEEEEEEEeC
Confidence 99999999999998877777777764
No 378
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.55 E-value=1.1e-15 Score=114.01 Aligned_cols=171 Identities=13% Similarity=0.098 Sum_probs=85.5
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCce-ecCCCeEEEEeEeccCC----CCceEEEeCCeeCCCCC
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQT-LPLHSVAFLPCQAVGSP----PPHIRWYKNGNSLPPED 181 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p----~~~~~W~~~~~~l~~~~ 181 (292)
|.|.|.+.+..+. ......+ .++.+....|.... +..|+.++|.|.+.+++ ...+.|+++|.++....
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~-----~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~ 73 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELL-----GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK 73 (240)
T ss_dssp -----------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCE
T ss_pred CceeeeeeecCCC--CCccccC-----CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCce
Confidence 6799998876553 1111111 12444455555555 56799999999998874 23699999998875421
Q ss_pred c-cEEEcCCCc------EEEEeeecCCCC--------------------------CCcceEE-------eCCCceEEEee
Q psy15128 182 T-RINVSSSGS------LQIDVLRDDFRA--------------------------EPKDTRV-------ASGETALLECG 221 (292)
Q Consensus 182 ~-~~~~~~~~~------l~i~~~~~~d~g--------------------------~~~~~~~-------~~g~~~~l~C~ 221 (292)
. ......++. |.|.....+|.| .++.+.+ ..|+.++|.|.
T Consensus 74 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~ 153 (240)
T 4acp_A 74 TKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCL 153 (240)
T ss_dssp ECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEE
T ss_pred eccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEE
Confidence 0 000111221 222222222222 1111222 13789999999
Q ss_pred CCCCCCCC-eEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccc
Q psy15128 222 PPKGQPEP-TLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 222 ~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
+...+|.+ .+.|+++|+.+............++.+... ..|.+......+.|.|+|.|+|..-
T Consensus 154 ~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~--s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 154 VKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLY--SKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE--EEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEE--EEEEEChHHhCCCCEEEEEEEECCC
Confidence 94336654 899999999874222222333444444322 2445555555678999999998764
No 379
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=1.3e-14 Score=92.94 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=61.7
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+............. ....|.|..+..+|+|.|+|.|.|.
T Consensus 12 ~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~------~~~~L~i~~v~~~D~G~Y~C~a~N~ 84 (99)
T 1g1c_A 12 IQSQTVGQGSDAHFRVRV-VGKPDPECEWYKNGVKIERSDRIYWYWPED------NVCELVIRDVTGEDSASIMVKAINI 84 (99)
T ss_dssp CCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEEEET------TEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcceEEcCCCcEEEEEEE-EEeCCCEEEEEECCEECCCCCCEEEEEcCC------CEEEEEECCCCcCCCEEEEEEEEEC
Confidence 356788999999999998 799999999999999986333222221112 1235889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|....
T Consensus 85 ~g~~~~ 90 (99)
T 1g1c_A 85 AGETSS 90 (99)
T ss_dssp TEEEEE
T ss_pred CCcEEE
Confidence 998764
No 380
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.54 E-value=1.8e-15 Score=113.07 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=89.4
Q ss_pred eEEeCCCCce-ecCCCeEEEEeEeccC---CCC-ceEEEeCCeeCCCCCc--cEEE-----cCCCcEEEEeeecCCCCCC
Q psy15128 138 IVQVGPSNQT-LPLHSVAFLPCQAVGS---PPP-HIRWYKNGNSLPPEDT--RINV-----SSSGSLQIDVLRDDFRAEP 205 (292)
Q Consensus 138 ~~~~~~~~~~-~~~g~~v~l~C~~~~~---p~~-~~~W~~~~~~l~~~~~--~~~~-----~~~~~l~i~~~~~~d~g~~ 205 (292)
++...+.... +.+|+.++|.|.+.+. |.+ .+.|++++..+..... .... .....|.|.++..+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3333344333 7799999999999876 666 8999998866543210 0000 0112577777777777722
Q ss_pred --------------------------cceEE-------eCCCceEEEeeCCCC-CCC-CeEEEeEcCeEeccCCCceEEe
Q psy15128 206 --------------------------KDTRV-------ASGETALLECGPPKG-QPE-PTLHWKKNGQFIDLESSKRVSI 250 (292)
Q Consensus 206 --------------------------~~~~~-------~~g~~~~l~C~~~~~-~p~-~~~~W~~~g~~~~~~~~~~~~~ 250 (292)
+.+.+ ..|+.+.|.|.+ .| +|+ +.+.|+++|+.+......+...
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~-~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 176 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMV-KGFYPPDIYTEWKMNGQPQENYKNTPPTM 176 (239)
T ss_dssp EEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEE-EEEBSSCCEEEEEETTEECSSEEECCCEE
T ss_pred EEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEE-eeeECCCeEEEEEECCEECCCceecCceE
Confidence 11111 136789999998 55 565 4899999999884221122223
Q ss_pred cCCCccccccccccccccccccccceeEEEEeeccccc
Q psy15128 251 LGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQ 288 (292)
Q Consensus 251 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~ 288 (292)
..++.+... ..|.+......|.|.|+|.|.|.....
T Consensus 177 ~~dgt~~~~--s~l~v~~~~~~~~g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 177 DTDGSYFLY--SKLNVKKETWQQGNTFTCSVLHEGLEN 212 (239)
T ss_dssp CTTSCEEEE--EEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CCCCCEEEE--EEEEEChhhcCCCCEEEEEEECCCCCC
Confidence 344433321 233444444456999999999987543
No 381
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.54 E-value=2.1e-15 Score=110.97 Aligned_cols=135 Identities=24% Similarity=0.358 Sum_probs=87.9
Q ss_pred EeCCCccEEecCCcEEEEEEEeeeCC---CeeEEEECCeEEeec-cC----CCcceeEEeeecEEEEccCCCCCCeEEEE
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGSPL---PSVFWTQEGSQVLMF-PG----NAYGHLHVTQEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~~~---~~v~W~~~~~~~~~~-~~----~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 111 (292)
...|....+.+|+.++|.|.+.+.++ +.+.| ++ ...... .. ...+. ......|.|.+++.+|.|.|+|
T Consensus 8 ~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~--~~~~~~L~I~~~~~~D~g~Y~C 83 (214)
T 1ow0_A 8 LHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGC--YSVSSVLPGCAEPWNHGKTFTC 83 (214)
T ss_dssp EECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTC--CCEEEECTTTHHHHHHTCEEEE
T ss_pred EECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cC-CCCCCcccCCceECCCCc--EEEEEEEEEeHHHcCCCCeEEE
Confidence 34466677889999999999988643 68999 43 222100 00 00111 1234578888899999999999
Q ss_pred EEEeCCcCeeEEEEEEEEeecCCCCCeEE-eCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCeeCCCC
Q psy15128 112 SALSVAGSTTVRAFLQVTSVEDTPPPIVQ-VGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGNSLPPE 180 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~~l~~~ 180 (292)
.+.+..+.......+.+ .....+|.+. ..+....+..|+.++|.|.+.++ |. +.+.|+++|..+...
T Consensus 84 ~~~~~~~~~~~~~~i~~--~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 153 (214)
T 1ow0_A 84 TAAYPESKTPLTATLSK--SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 153 (214)
T ss_dssp EECCSSCSSCEEEEEEC--CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGG
T ss_pred EEecCCCCCceeEeecc--CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCC
Confidence 99987664433333321 1112344443 33444446789999999999885 43 489999999987653
No 382
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.54 E-value=6.9e-14 Score=103.39 Aligned_cols=116 Identities=19% Similarity=0.266 Sum_probs=78.9
Q ss_pred cccCCcCCCeeEEEEEEeccc-ccccccEEEEEeC----CCcEE-eCCCccEEecCCcEEEEEEEee-eCC--CeeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-ERETKPALLTVHA----PPSFV-VRPQDQKVGLNGIASFQCVAEG-SPL--PSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-~~~~~~~~l~v~~----~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~~~--~~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.+... ......+.|.|.. +|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|++
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~ 162 (221)
T 3m8o_H 85 MNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSE 162 (221)
T ss_dssp ECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESC
T ss_pred ECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEE
Confidence 789999999999999988631 2233336778762 34443 233222 68999999999988 565 3899999
Q ss_pred CCeEEeeccCCC---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcC
Q psy15128 73 EGSQVLMFPGNA---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGS 119 (292)
Q Consensus 73 ~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~ 119 (292)
++..+....... .....+...+.|.|.+...+|.|.|+|.+.+..+.
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 163 SGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp CSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred CCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 886553211100 01111223447999999999999999999997654
No 383
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=5.1e-14 Score=92.68 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=68.7
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeee---CCCeeEEEECCeEEeec--cCCCccee-EE-----eeecEEEEccCCCCC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGS---PLPSVFWTQEGSQVLMF--PGNAYGHL-HV-----TQEGTLRIQGVQKED 105 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~v~W~~~~~~~~~~--~~~~~~~~-~~-----~~~~~l~i~~~~~~d 105 (292)
+.+...|....+.+|++++|.|.+.+. |.|.|.|+|+.. +... .+...... .. .....|+|.+++..|
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKW-MDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSS-CCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcC-cccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 456677888899999999999999874 789999999741 1100 00111000 01 124689999999999
Q ss_pred CeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 106 AGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 106 ~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
+|.|+|.+.|..+.....+.|.|.+
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999988888888888875
No 384
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.53 E-value=1.5e-14 Score=91.44 Aligned_cols=76 Identities=22% Similarity=0.295 Sum_probs=60.6
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcC--eEeccCCCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNG--QFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
+....+.+|+.+.|.|.+ .|.|.|.+.|+++| ..+.. ...+... .....|.|..+...|+|.|+|.|.
T Consensus 9 ~~~~~v~~G~~~~l~C~~-~g~P~p~i~W~k~~~~~~~~~--~~~~~~~-------~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDF-IGAPDPTATWTVGDSGAALAP--ELLVDAK-------SSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEEEECTTBCCEEEEEE-ECCSSCEEEEECSTTTCBCST--TSEEEEE-------TTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCceEEeCCCEEEEEEEE-EEcCCCEEEEEECCCCcccCC--cEEEEec-------CCEEEEEECCCChhcCEEEEEEEE
Confidence 456788999999999998 89999999999999 87742 2222211 112368899999999999999999
Q ss_pred eccccccc
Q psy15128 283 NIRNQQQH 290 (292)
Q Consensus 283 n~~g~~~~ 290 (292)
|..|.++.
T Consensus 79 N~~G~~~~ 86 (93)
T 1wit_A 79 NELGEDEA 86 (93)
T ss_dssp ETTEEEEE
T ss_pred cCCCeEEE
Confidence 99998764
No 385
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.53 E-value=5.8e-14 Score=99.27 Aligned_cols=101 Identities=17% Similarity=0.141 Sum_probs=71.7
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCCc---EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEE
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPS---FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQV 77 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~---~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~ 77 (292)
.|.+++.+|+|.|+|.+.+..+ . ..+.|.|..++. +.... ....|.|.+.+.|.+.+.|++++..+
T Consensus 63 ~I~~v~~~DsG~Y~C~~~n~~~--~-~~~~L~V~~~~~~p~i~~~~--------~~~~L~C~~~~~p~p~i~W~~~~~~l 131 (171)
T 1ccz_A 63 TIYNLTSSDEDEYEMESPNITD--T-MKFFLYVLEMVSKPMIYWEC--------SNATLTCEVLEGTDVELKLYQGKEHL 131 (171)
T ss_dssp EECSCCGGGCEEEEEECTTCCS--C-EEEEEEEECCCCCCEEEEET--------TTTEEEEECSSCSSCEEEEEETTEEE
T ss_pred EECCCChhhCceEEEEEeCCCC--c-EEEEEEEECcCCCCEEEEec--------CCcEEEEEeCCCCCcEEEEEECCEEC
Confidence 3789999999999999988766 3 338888876532 22111 11389999998888999999999876
Q ss_pred eeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEE
Q psy15128 78 LMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAF 125 (292)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~ 125 (292)
... ....|.+. ..+|.|.|+|.|.|..+.......
T Consensus 132 ~~~-----------~~~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~ 166 (171)
T 1ccz_A 132 RSL-----------RQKTMSYQ--WTNLRAPFKCKAVNRVSQESEMEV 166 (171)
T ss_dssp EEE-----------SSSEEEEE--CSCCSSCEEEEEEETTEEEEEEEC
T ss_pred cCC-----------cceEEEEe--ccCCCceEEEEEEcccCcccceeE
Confidence 421 11233333 367899999999998876555443
No 386
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.53 E-value=2e-13 Score=101.70 Aligned_cols=133 Identities=14% Similarity=0.206 Sum_probs=77.3
Q ss_pred CccEEecCCcEEEEEEEeee--CCCee--EEEECC--e--EEe-ec--c---------CCCcceeEEeee-----cEEEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGS--PLPSV--FWTQEG--S--QVL-MF--P---------GNAYGHLHVTQE-----GTLRI 98 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~--~~~~v--~W~~~~--~--~~~-~~--~---------~~~~~~~~~~~~-----~~l~i 98 (292)
....+.+|++++|.|.+.+. +...+ .|+|.. . ... .. . .....++....+ ..|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 34668899999999999763 22445 999842 1 111 00 0 111234444322 26999
Q ss_pred ccCCCCCCeEEEEEEEeCCc--------CeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCC--Cce
Q psy15128 99 QGVQKEDAGFFVCSALSVAG--------STTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPP--PHI 168 (292)
Q Consensus 99 ~~~~~~d~g~Y~C~~~~~~~--------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~ 168 (292)
.+++.+|+|.|.|.+.+..+ .......+.|.. ....+|.+...+....+..|+.++|.|.+.+.++ ..+
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 166 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 166 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS-SCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEE
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec-CCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEE
Confidence 99999999999999986521 111223444432 2223444543333344567999999999987533 357
Q ss_pred EEEeCCeeC
Q psy15128 169 RWYKNGNSL 177 (292)
Q Consensus 169 ~W~~~~~~l 177 (292)
.|++++..+
T Consensus 167 ~W~~~g~~~ 175 (232)
T 3qhz_H 167 SWNSGALTS 175 (232)
T ss_dssp EEGGGTBCT
T ss_pred EEEECCEec
Confidence 899988654
No 387
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.53 E-value=9.6e-15 Score=109.80 Aligned_cols=141 Identities=19% Similarity=0.217 Sum_probs=90.6
Q ss_pred CCCCceecCCCeEEEEeEeccCCCCceEEEeC--------------CeeCCCC---CccEEEcC----CCcEEEEeeecC
Q psy15128 142 GPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKN--------------GNSLPPE---DTRINVSS----SGSLQIDVLRDD 200 (292)
Q Consensus 142 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~--------------~~~l~~~---~~~~~~~~----~~~l~i~~~~~~ 200 (292)
.+....+.+|+.++|.| ..+.+.+.+.|+|. +..+... ..++.... ..+|.|.+++.+
T Consensus 8 ~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 86 (245)
T 4ei6_B 8 IPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE 86 (245)
T ss_dssp ECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG
T ss_pred CCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh
Confidence 44556788999999999 65677889999982 2111111 03343332 227999999999
Q ss_pred CCCCCc--------------------------------ceEE--------eCCCceEEEeeCCCC-CCCC-eEEEeEcCe
Q psy15128 201 FRAEPK--------------------------------DTRV--------ASGETALLECGPPKG-QPEP-TLHWKKNGQ 238 (292)
Q Consensus 201 d~g~~~--------------------------------~~~~--------~~g~~~~l~C~~~~~-~p~~-~~~W~~~g~ 238 (292)
|+|.|. ...+ ..|+.++|.|.+ .+ .|++ .+.|+++|+
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~~p~~~~v~W~~~g~ 165 (245)
T 4ei6_B 87 DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLA-TGFYPDHVELSWWVNGK 165 (245)
T ss_dssp GCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEE-EEEBSSCEEEEEEETTE
T ss_pred HCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEE-eeEeCCCeEEEEEECCE
Confidence 998330 0111 127899999998 55 5655 899999999
Q ss_pred EeccCCCceEEec--------CCCccccccccccccccccccc-cceeEEEEeeccccc
Q psy15128 239 FIDLESSKRVSIL--------GDPWFDSRRSRSIFGSVLGALS-DDQWKLIAKNIRNQQ 288 (292)
Q Consensus 239 ~~~~~~~~~~~~~--------~~~~~~~~~~~~l~i~~~~~~~-~g~y~C~a~n~~g~~ 288 (292)
.+.. ....... .++.+. ....|.+......| .|.|+|.|+|.....
T Consensus 166 ~l~~--~~~~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~ 220 (245)
T 4ei6_B 166 EVHS--GVCTDPQPLKEQPALNDSRYA--LSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EECT--TEEECSSCEESSTTSTTCCEE--EEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred ECCC--CcccccccccccccCCCCCEE--EEEEEEEcHHHhccCCCeEEEEEEECCCCC
Confidence 9852 2222111 123222 12346677777777 899999999986554
No 388
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.53 E-value=2.2e-14 Score=92.54 Aligned_cols=77 Identities=10% Similarity=0.222 Sum_probs=61.7
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... .++.+...+ ....|.|..+..+|+|.|+|.|.|..
T Consensus 16 ~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~N~~ 87 (103)
T 3qp3_A 16 RSHRVPCGQNTRFILNV-QSKPTAEVKWYHNGVELQES--SKIHYTNTS-----GVLTLEILDCHTDDSGTYRAVCTNYK 87 (103)
T ss_dssp CCEEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCC--SSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cceEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCC--CCEEEEECC-----CEEEEEEcCCCcccCEEEEEEEEeCC
Confidence 56788999999999998 89999999999999998633 333332221 12368899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 88 G~~~~ 92 (103)
T 3qp3_A 88 GEASD 92 (103)
T ss_dssp EEEEE
T ss_pred CcEEE
Confidence 98754
No 389
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.53 E-value=3.3e-14 Score=108.99 Aligned_cols=115 Identities=20% Similarity=0.356 Sum_probs=77.9
Q ss_pred cccCCcCCCeeEEEEEEec--------ccccccccEEEEEeC---------------CCcEEeCCCccEEecCCcEEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNM--------VGERETKPALLTVHA---------------PPSFVVRPQDQKVGLNGIASFQC 58 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~--------~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C 58 (292)
|.+++.+|+|.|+|.+.+. ........+.|.|.. ++.+...+. ..+.+|++++|.|
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C 161 (280)
T 3fku_X 83 LRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTC 161 (280)
T ss_dssp ECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEE
T ss_pred ECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEE
Confidence 7899999999999999876 112222336777776 444444444 7889999999999
Q ss_pred EEee-eC-CCeeEEEECC--eEEee-c--c----CCCcceeEEee---ecEEEEccCCCCCCeEEEEEEEeCC
Q psy15128 59 VAEG-SP-LPSVFWTQEG--SQVLM-F--P----GNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCSALSVA 117 (292)
Q Consensus 59 ~~~~-~~-~~~v~W~~~~--~~~~~-~--~----~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~~~~~~ 117 (292)
.+.+ .+ .+.+.|+|.. ..... . . .....++.... ...|.|.+++.+|+|.|+|.+.+..
T Consensus 162 ~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 162 TGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp ECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 9987 33 4789999832 21110 0 0 00112222222 2359999999999999999998765
No 390
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.53 E-value=2.5e-13 Score=108.47 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=87.9
Q ss_pred EecCCcEEEEEEEeee---CC-CeeEEEECCeEEeeccCCC---cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 48 VGLNGIASFQCVAEGS---PL-PSVFWTQEGSQVLMFPGNA---YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 48 ~~~g~~~~l~C~~~~~---~~-~~v~W~~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
+.+|+.++|.|.+.+. |. ..|.|++++..+....... ...........|.|..++.+|.|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 7789999999999886 32 3699999986542111100 111122334579999999999999999999876644
Q ss_pred eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceEEEeCCeeCCC
Q psy15128 121 TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWYKNGNSLPP 179 (292)
Q Consensus 121 ~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~~~~~l~~ 179 (292)
.....+.+. .....+|.+.+.+.......|+.++|.|.+.++ | .+.|.|+|+|.++..
T Consensus 260 ~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 319 (376)
T 2aty_A 260 PIEKTISKT-KGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAEN 319 (376)
T ss_pred ceEEEEcCC-CCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCC
Confidence 333333221 112335566555555555568999999999886 3 457999999988743
No 391
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.53 E-value=1.3e-14 Score=106.92 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=72.9
Q ss_pred cccCCcCCCeeEEEEEEecccc---cccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeeeCC--CeeEEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE---RETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGSPL--PSVFWTQ 72 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~v~W~~ 72 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...+....+.+|+.++|.|.+.+.++ ..+.|++
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~ 158 (215)
T 3nl4_H 79 ITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS 158 (215)
T ss_dssp ESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEee
Confidence 7899999999999999886542 12333678886 4555554444445667999999999988643 3577999
Q ss_pred CCeEEeeccCCCcceeEEeeecEEEE---ccCCCCCCeEEEEEEEeCCcCeeEEEEE
Q psy15128 73 EGSQVLMFPGNAYGHLHVTQEGTLRI---QGVQKEDAGFFVCSALSVAGSTTVRAFL 126 (292)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~i---~~~~~~d~g~Y~C~~~~~~~~~~~~~~l 126 (292)
++..+...... .....++.+.+ ..+...| |.|+|.+.|..+.......+
T Consensus 159 ~g~~~~~~~~~----~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 159 GTLTNGVRTFP----SVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp GTBCTTEEECC----CEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred CCEECCeEecC----ceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 88633211110 01111222222 3455556 99999999988765554443
No 392
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.53 E-value=3.7e-14 Score=107.50 Aligned_cols=114 Identities=17% Similarity=0.242 Sum_probs=79.9
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeCC-----------------CcEEeCCCccEEecCCcEEEEEEEee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHAP-----------------PSFVVRPQDQKVGLNGIASFQCVAEG 62 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~~-----------------p~~~~~~~~~~~~~g~~~~l~C~~~~ 62 (292)
|.+++++|+|.|+|.+.+..+. .....+.|.|..+ |.+...+....+.+|++++|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 7899999999999999987542 2333377888763 45566677788999999999998877
Q ss_pred e-CCCeeEEEECCe--EEee--c-c----CCCcceeEEe-----eecEEEEccCCCCCCeEEEEEEEe
Q psy15128 63 S-PLPSVFWTQEGS--QVLM--F-P----GNAYGHLHVT-----QEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 63 ~-~~~~v~W~~~~~--~~~~--~-~----~~~~~~~~~~-----~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
. +.+.+.|+|... .... . . .....++... ....|.|.+++.+|+|.|+|.+..
T Consensus 163 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 163 SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 4 778999998531 1110 0 0 0011222222 123699999999999999999974
No 393
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.52 E-value=2.9e-13 Score=101.68 Aligned_cols=135 Identities=16% Similarity=0.280 Sum_probs=80.2
Q ss_pred CCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--eE--Ee-ecc---------CCCcceeEEeee-----cEEEEcc
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--SQ--VL-MFP---------GNAYGHLHVTQE-----GTLRIQG 100 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~~--~~-~~~---------~~~~~~~~~~~~-----~~l~i~~ 100 (292)
.+....+.+|++++|.|.+.+. +...+.|+|.. .. .. ... .....++....+ ..|+|.+
T Consensus 5 ~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 5 ESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 3446678899999999999752 34589999842 11 11 000 111234444322 3699999
Q ss_pred CCCCCCeEEEEEEEeCC----------------------cCeeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEe
Q psy15128 101 VQKEDAGFFVCSALSVA----------------------GSTTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPC 158 (292)
Q Consensus 101 ~~~~d~g~Y~C~~~~~~----------------------~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C 158 (292)
++.+|+|.|.|.+.+.. ........+.|.. ....+|.+...+....+..|+.++|.|
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~-~~~~~P~v~~~~~~~~~~~g~~~~L~C 163 (248)
T 3u2s_H 85 LRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGC 163 (248)
T ss_dssp CCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS-CCCBCCEEEEECCC------CEEEEEE
T ss_pred CCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc-cCCCCCEEEEeCCCccccCCCcEEEEE
Confidence 99999999999998631 0111123444432 222344444333434456799999999
Q ss_pred EeccC-C-CCceEEEeCCeeC
Q psy15128 159 QAVGS-P-PPHIRWYKNGNSL 177 (292)
Q Consensus 159 ~~~~~-p-~~~~~W~~~~~~l 177 (292)
.+.+. | ...+.|++++..+
T Consensus 164 ~~~~~~P~~~~v~W~~~g~~~ 184 (248)
T 3u2s_H 164 LVKDYFPEPVTVSWNSGALTS 184 (248)
T ss_dssp EEEEEBSSCCEEEEGGGTBCT
T ss_pred EEeeEECCCeEEEEeECCccC
Confidence 99775 4 3469999988654
No 394
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=3.2e-14 Score=93.57 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=62.5
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ..++.+.... ....|.|..+...|+|.|+|.|.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~--~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 14 PEDQKVRAGESVELFGKV-TGTQPITCTWMKFRKQIQE--SEHMKVENSE-----NGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCSEEEETTCCEEEEEEE-ESSSSCEEEEEESSSBCCC--SSSEEEEECS-----SEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCeEEeCCCeEEEEEEE-EcCCCCEEEEEECCEECcC--CCCEEEEEcC-----CEEEEEECCCChhcCEEEEEEEEEC
Confidence 456788999999999998 8999999999999998853 3344433221 1236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|.++.
T Consensus 86 ~g~~~~ 91 (114)
T 2cqv_A 86 LGSRQA 91 (114)
T ss_dssp SCEEEC
T ss_pred CCcEEE
Confidence 998754
No 395
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.52 E-value=4.2e-15 Score=111.43 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=91.8
Q ss_pred CCCCceecCCCeEEEEeEeccCCCCceEEEeCC--------------eeCC--CCCccEEEcC----CCcEEEEeeecCC
Q psy15128 142 GPSNQTLPLHSVAFLPCQAVGSPPPHIRWYKNG--------------NSLP--PEDTRINVSS----SGSLQIDVLRDDF 201 (292)
Q Consensus 142 ~~~~~~~~~g~~v~l~C~~~~~p~~~~~W~~~~--------------~~l~--~~~~~~~~~~----~~~l~i~~~~~~d 201 (292)
.+....+.+|+.++|.|.+.+ +.+.+.|+|.. .... ....++.... ..+|.|.+++.+|
T Consensus 8 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 86 (240)
T 3q5y_A 8 SPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELED 86 (240)
T ss_dssp ECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred CcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhH
Confidence 345567889999999999865 67789999821 1100 0012333322 2369999999999
Q ss_pred CCCCc-------------------------------ceE--------EeCCCceEEEeeCCCCCCCC-eEEEeEcCeEec
Q psy15128 202 RAEPK-------------------------------DTR--------VASGETALLECGPPKGQPEP-TLHWKKNGQFID 241 (292)
Q Consensus 202 ~g~~~-------------------------------~~~--------~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~~~ 241 (292)
+|.|. ... +..|+.++|.|.+....|.+ .+.|+++|+++.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 87 SAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp CEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 99331 011 11278899999983336666 899999999985
Q ss_pred cCCCc--eEEecCCCccccccccccccccccccc-cceeEEEEeecccccc
Q psy15128 242 LESSK--RVSILGDPWFDSRRSRSIFGSVLGALS-DDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 242 ~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~-~g~y~C~a~n~~g~~~ 289 (292)
..... ......++.+. ....|.|......| .|.|+|.|.|......
T Consensus 167 ~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~~ 215 (240)
T 3q5y_A 167 SGVSTDPQAYKESNYSYS--LSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 215 (240)
T ss_dssp TTEEECSSCEEEETTEEE--EEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CcEecCCceeeCCCCCEE--EEEEEEECHHHhccCCCEEEEEEEcCCCCCc
Confidence 22111 01122233222 12347777777888 6699999999876543
No 396
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.52 E-value=4.2e-14 Score=90.12 Aligned_cols=79 Identities=10% Similarity=0.124 Sum_probs=62.0
Q ss_pred CCcceEEeCCCceEEEeeCCCCC-CCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 204 EPKDTRVASGETALLECGPPKGQ-PEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
.+....+.+|+.+.|.|.+ .+. |.+.+.|++++..+.. ..++.+... .....|.|..+...|+|.|+|.|.
T Consensus 7 ~~~~~~v~~G~~v~l~C~~-~g~~p~~~v~W~~~~~~~~~--~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKI-ENYDQSTQVTWYFGVRQLEN--SEKYEITYE-----DGVAILYVKDITKLDDGTYRCKVV 78 (97)
T ss_dssp CCCCEEECTTCCEEEEEEE-ESCCTTCEEEEEETTEECCS--SSSEEEEEE-----TTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cCcCEEEcCCCcEEEEEEE-eccCCCCEEEEEECCEECcC--CCCEEEEEc-----CCeEEEEEecCChhhCeEEEEEEE
Confidence 4567889999999999998 776 8899999999998863 333332111 112368899999999999999999
Q ss_pred eccccccc
Q psy15128 283 NIRNQQQH 290 (292)
Q Consensus 283 n~~g~~~~ 290 (292)
|..|....
T Consensus 79 n~~g~~~~ 86 (97)
T 2bk8_A 79 NDYGEDSS 86 (97)
T ss_dssp CSSCEEEE
T ss_pred CCCCeEeE
Confidence 99998764
No 397
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.3e-13 Score=91.28 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=68.8
Q ss_pred CCCcEEe---CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVV---RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~---~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++++..+. ..............|.|.++..+|+|.|+|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~---~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD---TSRVHVRTSDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC---CSSCEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC---CCcEEEEECCCeEEEEECCCChhcCEEEEE
Confidence 3455543 2356788899999999999999999999999998763 111111111223469999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+.|..|.....+.|.|.
T Consensus 97 ~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 97 SVQIENMKDTATIRIRVV 114 (118)
T ss_dssp EEECSSCEECCEEEEEEE
T ss_pred EEEeCCCeEEEEEEEEEE
Confidence 999999877766766665
No 398
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.52 E-value=3.6e-14 Score=89.32 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=58.4
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+.+..+.+|+.+.|.|.+ .+ |++.+.|+|+|++|.. +.++.+..++ ....|.|..+..+|+|.|+|.|.|.
T Consensus 12 ~~~~~v~~G~~v~l~C~v-~~-~~~~v~W~k~g~~i~~--~~~~~i~~~g-----~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 12 LYGVEVFVGETAHFEIEL-SE-PDVHGQWKLKGQPLAA--SPDCEIIEDG-----KKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCEEEETTSCEEEEEEE-SS-SSCCCEEEETTEECCC--BTTEEEEEET-----TEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CcceEEeCCCCEEEEEEE-CC-CCCeEEEEECCEECcC--CCCEEEEEEC-----CEEEEEECCCChhhCEEEEEEECCC
Confidence 457789999999999998 55 4578999999999863 3344433222 1236899999999999999999998
Q ss_pred ccccc
Q psy15128 285 RNQQQ 289 (292)
Q Consensus 285 ~g~~~ 289 (292)
.+++.
T Consensus 83 ~~sa~ 87 (93)
T 1waa_A 83 KSAAN 87 (93)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 76553
No 399
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=2.3e-13 Score=101.15 Aligned_cols=139 Identities=17% Similarity=0.251 Sum_probs=87.6
Q ss_pred EeCCCccEEecCCcEEEEEEEeee--CCCeeEEEECC--e--E-Eeecc-CC-------CcceeEEee-----ecEEEEc
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S--Q-VLMFP-GN-------AYGHLHVTQ-----EGTLRIQ 99 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~--~-~~~~~-~~-------~~~~~~~~~-----~~~l~i~ 99 (292)
...+..+.+.+|++++|.|.+.+. +...+.|+|.. . . +.... .. ...++.... ...|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 344566788999999999999764 55689999853 1 1 11111 10 123444332 2379999
Q ss_pred cCCCCCCeEEEEEEEeC--CcC--eeEEEEEEEEeec------CCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-Cc
Q psy15128 100 GVQKEDAGFFVCSALSV--AGS--TTVRAFLQVTSVE------DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PH 167 (292)
Q Consensus 100 ~~~~~d~g~Y~C~~~~~--~~~--~~~~~~l~v~~~~------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~ 167 (292)
+++.+|+|.|.|.+.+. ... ......|.|.... ..+.+.+. .+....+..|+.++|.|.+.+. |. +.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~-~p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 85 SLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIF-LPSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp SCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEE-CCCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred cCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEE-CCCchhhccCCcceEEEEEeeecCCCeE
Confidence 99999999999999874 111 1122355554211 11222332 2443445678999999999876 65 58
Q ss_pred eEEEe-CCeeCCC
Q psy15128 168 IRWYK-NGNSLPP 179 (292)
Q Consensus 168 ~~W~~-~~~~l~~ 179 (292)
+.|++ +|..+..
T Consensus 164 v~W~~~~g~~l~~ 176 (230)
T 1ypz_F 164 VYWKEKDGNTILD 176 (230)
T ss_dssp EEEECTTSSCBCC
T ss_pred EEEEccCCeEccc
Confidence 99999 7776643
No 400
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.52 E-value=7e-14 Score=88.66 Aligned_cols=86 Identities=19% Similarity=0.340 Sum_probs=66.9
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+.. ..+... ..+.|.|.+++.+|+|.|+|.+.|
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~-----~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVE-----SNRTRI-TGEEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCC-----CSSEEE-CSSEEEESSCCGGGSEEEEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCC-----CCCEEE-eCCEEEECCCChHHCEEEEEEecc
Confidence 45555566777899999999999999887 79999998876531 112222 267899999999999999999999
Q ss_pred CCcCeeEEEEEEE
Q psy15128 116 VAGSTTVRAFLQV 128 (292)
Q Consensus 116 ~~~~~~~~~~l~v 128 (292)
..|.......|.|
T Consensus 82 ~~g~~~~~~~l~V 94 (95)
T 2ckn_A 82 PSGSDTTYFSVNV 94 (95)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 8887666665554
No 401
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.52 E-value=4e-14 Score=91.67 Aligned_cols=89 Identities=24% Similarity=0.429 Sum_probs=71.3
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEe---eecEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVT---QEGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+. . ..+.... ....|.|.+++.+|+|.|+|
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~--~---~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLS--T---SARHQVTTTKYKSTFEISSVQASDEGNYSV 87 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCT--T---CSSEEEEECSSEEEEEECCCCSSCCSEEEE
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECC--C---CCCEEEEECCCEEEEEECcCCchhCEEEEE
Confidence 35677778888899999999999999999999999999987652 1 1122222 24689999999999999999
Q ss_pred EEEeCCcCeeEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQV 128 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v 128 (292)
.+.|..|.....+.|.|
T Consensus 88 ~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 88 VVENSEGKQEAEFTLTI 104 (106)
T ss_dssp CCBCSSCBCCEEEEEEE
T ss_pred EEEeCCCeEEEEEEEEE
Confidence 99999888777776665
No 402
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.51 E-value=1e-13 Score=105.00 Aligned_cols=119 Identities=16% Similarity=0.176 Sum_probs=78.5
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~ 168 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 168 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecC
Confidence 7899999999999999985321 122336888874 3554433323346679999999999885 666 9999998
Q ss_pred CeEEeeccCC-CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 74 GSQVLMFPGN-AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
+..+...... ..........+.|.|.++..+| |.|+|.+.|......
T Consensus 169 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 169 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred CCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 8643111000 0000122334679999988888 999999998765433
No 403
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.51 E-value=1e-13 Score=102.04 Aligned_cols=120 Identities=17% Similarity=0.189 Sum_probs=76.3
Q ss_pred cccCCcCCCeeEEEEEEecccc--cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-CCC-eeEEEEC
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE--RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-PLP-SVFWTQE 73 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~-~v~W~~~ 73 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |.+ .+.|+++
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 161 (215)
T 1c5d_H 82 MNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSG 161 (215)
T ss_dssp ESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccC
Confidence 7899999999999999886422 222337888873 3555443323345689999999999986 777 9999998
Q ss_pred CeEEeeccCCCc-ceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEE
Q psy15128 74 GSQVLMFPGNAY-GHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRA 124 (292)
Q Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~ 124 (292)
+..+........ ....+.....|. ....+| |.|+|.+.|..+......
T Consensus 162 g~~~~~~~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 162 ALSSDVHTFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp TTCCSCCBCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CccCceEecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEE
Confidence 764321100000 000111122344 444456 999999999887655443
No 404
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=1.9e-14 Score=97.40 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=60.9
Q ss_pred CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcC----------------------------eEeccCCCceEEecCCCc
Q psy15128 204 EPKDTRVASGETALLECGPPKGQPEPTLHWKKNG----------------------------QFIDLESSKRVSILGDPW 255 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g----------------------------~~~~~~~~~~~~~~~~~~ 255 (292)
.+....+.+|+.++|.|.+ .|.|.|.+.|+++| ..+. ....++.+...
T Consensus 24 ~p~~~~v~~G~~v~L~C~~-~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~r~~i~~~-- 99 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPI-SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC-ETEGRVRVETT-- 99 (139)
T ss_dssp CCCEEEESSSSCCCCEEEC-CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC-SCSSSCEEEEE--
T ss_pred CCCCEEEeCCCeEEEEEEE-EEcCCCeEEEEECCcccccccccccccccccccccccccccceeec-CCCCeEEEEeC--
Confidence 4568899999999999998 89999999999998 3331 12222222211
Q ss_pred cccccccccccccccccccceeEEEEeeccccccc
Q psy15128 256 FDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 256 ~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
.....|.|..+...|+|.|+|+|.|.+|.++.
T Consensus 100 ---~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~ 131 (139)
T 1gxe_A 100 ---KDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQV 131 (139)
T ss_dssp ---TTEEEEECSCCCTTTCEEEEEEEECSSCEEEE
T ss_pred ---CCEEEEEECCCCcccCEEEEEEEEeCCceEEE
Confidence 11236999999999999999999999998764
No 405
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.51 E-value=2.4e-14 Score=91.80 Aligned_cols=80 Identities=18% Similarity=0.314 Sum_probs=64.4
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+......++.+...+ ....|.|..+..+|+|.|+|.|.|.
T Consensus 12 ~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~a~n~ 85 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAF-TGEPTPEVTWSCGGRKIHSQEQGRFHIENTD-----DLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp CSEEEEETTSEEEEEEEE-EEESCCEEEEEETTEECCTTGGGTEEEEECS-----SEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEcCCCcEEEEEEE-EEcCCCceEEEECCEEeecCCCCEEEEEecC-----CEEEEEEeecCcccCEEEEEEEEeC
Confidence 456788999999999998 8899999999999998864444455544332 1236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 86 ~g~~~~ 91 (100)
T 3irg_A 86 FGSDSA 91 (100)
T ss_dssp TEEEEE
T ss_pred CCcEEE
Confidence 998654
No 406
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.51 E-value=3.3e-14 Score=91.03 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=61.2
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.... .++....++ ....|.|..+...|+|.|+|.|.|..
T Consensus 13 ~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~~~~~~~~~-~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~N~~ 85 (99)
T 1u2h_A 13 MDQSVREGQDVIMSIRV-QGEPKPVVSWLRNRQPVRPDQ-RRFAEEAEG-----GLCRLRILAAERGDAGFYTCKAVNEY 85 (99)
T ss_dssp CCEEEETTCCEEEEEEE-EEESCCEEEEEETTEECCCBT-TEEEEECGG-----GEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CceEecCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCC-CEEEEECCC-----CEEEEEEccCCcCCCEEEEEEEEECC
Confidence 45688999999999998 889999999999999885322 233332221 11258899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 86 g~~~~ 90 (99)
T 1u2h_A 86 GARQC 90 (99)
T ss_dssp EEEEE
T ss_pred CceeE
Confidence 98754
No 407
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.51 E-value=2.6e-13 Score=102.39 Aligned_cols=140 Identities=20% Similarity=0.355 Sum_probs=90.1
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e--EEeec-cC-------CCcceeEEee----ecEEEEccCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S--QVLMF-PG-------NAYGHLHVTQ----EGTLRIQGVQ 102 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~--~~~~~-~~-------~~~~~~~~~~----~~~l~i~~~~ 102 (292)
+...+..+.+.+|++++|.|.+. .+.+.+.|+|.. . ..... .. ....+..... ...|.|.+++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 44456677899999999999985 456799999853 1 11111 10 0123333322 3479999999
Q ss_pred CCCCeEEEEEEEeCC---cCeeEEEEEEEEee-cCCCCCeEEe-CCCCceecCCCeEEEEeEeccC-CC-CceEEEeCCe
Q psy15128 103 KEDAGFFVCSALSVA---GSTTVRAFLQVTSV-EDTPPPIVQV-GPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNGN 175 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~---~~~~~~~~l~v~~~-~~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~~ 175 (292)
.+|+|.|.|.+.+.. ........+.|... ....+|.+.+ .+....+.+|+.++|.|.+.+. |. +.+.|+++|.
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 164 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 164 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCE
Confidence 999999999998752 11112234555431 1112444443 3444445579999999999875 65 4899999998
Q ss_pred eCCC
Q psy15128 176 SLPP 179 (292)
Q Consensus 176 ~l~~ 179 (292)
.+..
T Consensus 165 ~l~~ 168 (252)
T 1oga_E 165 EVHS 168 (252)
T ss_dssp EECS
T ss_pred ECCC
Confidence 8765
No 408
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=4.5e-14 Score=90.55 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=60.6
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ...++....+ ..|.|..+...|+|.|+|.|.|..
T Consensus 16 ~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~-~~~~~~~~~~--------~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 16 ANQTLAVDGTALLKCKA-TGDPLPVISWLKEGFTFPG-RDPRATIQEQ--------GTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp CCEEEESSSEEEECCEE-ECSSCCEEEEEESSSEESS-SCSSCEECTT--------CCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCEEEcCCCcEEEEEEE-EEcCCCEEEEEECCEECCC-CCCCEEEcCC--------CEEEEccCCcccCEEEEEEEEcCC
Confidence 45678899999999998 7999999999999988852 2233333222 258899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 86 g~~~~ 90 (100)
T 2edj_A 86 GETSW 90 (100)
T ss_dssp CCCBC
T ss_pred CCEEE
Confidence 98754
No 409
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=3e-13 Score=98.76 Aligned_cols=149 Identities=19% Similarity=0.228 Sum_probs=89.6
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECC--e--EEeeccC---CCcceeEEee------ecEEEEccCCCCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEG--S--QVLMFPG---NAYGHLHVTQ------EGTLRIQGVQKED 105 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~--~--~~~~~~~---~~~~~~~~~~------~~~l~i~~~~~~d 105 (292)
+...+..+.+.+|++++|.|.+.+.+ +.+.|+|.. . ....... ....++.... ...|+|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 34456677899999999999997644 479999853 1 1111000 0112333332 2479999999999
Q ss_pred CeEEEEEEEeCCc---------C--eeEEEEEEEEeec-CCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEE
Q psy15128 106 AGFFVCSALSVAG---------S--TTVRAFLQVTSVE-DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWY 171 (292)
Q Consensus 106 ~g~Y~C~~~~~~~---------~--~~~~~~l~v~~~~-~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~ 171 (292)
+|.|.|.+.+..+ . ......|.|.... ...+|.+.. ..+ .+.|.|.+.+. |. +.+.|+
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~-------~~~-~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI-------MKN-GTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE-------EEE-TTEEEEEEEEESSSCCEEEEE
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE-------eCC-CCeEEEEEeeEeCCCeEEEEe
Confidence 9999999987532 1 1122455554311 111222221 111 26999999775 44 689999
Q ss_pred eCCeeCCCCCccEEEcCCCcEEEEee
Q psy15128 172 KNGNSLPPEDTRINVSSSGSLQIDVL 197 (292)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~l~i~~~ 197 (292)
++ ..+...........++.+.+...
T Consensus 155 ~~-~~l~~~~~~~~~~~~g~y~~~~~ 179 (207)
T 1ypz_E 155 SS-KKIVEFDPAIVISPSGKYSAVKL 179 (207)
T ss_dssp CS-SEEEECCCEEEECTTSSEEEEEC
T ss_pred cC-CcccCCccceEEcCCCcEEEEEe
Confidence 99 66654333333456677777643
No 410
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.50 E-value=2.8e-15 Score=99.92 Aligned_cols=100 Identities=22% Similarity=0.334 Sum_probs=76.9
Q ss_pred EEEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCe-eEEEECCeEEeeccCCCcceeEEee----ecEEEEccCCC
Q psy15128 29 ALLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPS-VFWTQEGSQVLMFPGNAYGHLHVTQ----EGTLRIQGVQK 103 (292)
Q Consensus 29 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~ 103 (292)
+.|.|..+|.+.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+.......+....... ...|.|.+++.
T Consensus 7 ~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (122)
T 2cry_A 7 GTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVR 85 (122)
T ss_dssp CCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCH
T ss_pred EEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCCh
Confidence 7788889998888 7788899999999999999999887 9999998876421111111110111 34899999999
Q ss_pred CCC-eEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 104 EDA-GFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 104 ~d~-g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
+|. |.|+|.|.|..|.....+.|.|.
T Consensus 86 ~D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 86 ADFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp HHHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred hhCCceEEEEEECCCCeEEEEEEEEEC
Confidence 999 99999999999987766666554
No 411
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=5.1e-14 Score=91.99 Aligned_cols=93 Identities=27% Similarity=0.443 Sum_probs=72.4
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee--ecEEEEccCCCCCCeEEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ--EGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~Y~C~ 112 (292)
.+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.... ........ ...|.|.+++.+|+|.|+|.
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~---~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDS---AHKMLVRENGVHSLIIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCS---SEEEEECTTSCEEEEESSCCGGGCSBBCEE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC---ceEEEEecCCeEEEEEeeCCcccCEEEEEE
Confidence 36777778888899999999999999999999999999887653111 11111111 23899999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEe
Q psy15128 113 ALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~ 130 (292)
+.|..+.....+.|.|..
T Consensus 85 a~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 85 ATNRAGQNSFSLELVVAA 102 (110)
T ss_dssp EECSSCEEEECCEEEEEC
T ss_pred EECCCCEEEEEEEEEEeC
Confidence 999988877777777764
No 412
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.50 E-value=4.9e-13 Score=85.10 Aligned_cols=88 Identities=18% Similarity=0.179 Sum_probs=66.3
Q ss_pred EeCCCccEEecCCcEEEEEEEeee-CCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCc
Q psy15128 40 VVRPQDQKVGLNGIASFQCVAEGS-PLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAG 118 (292)
Q Consensus 40 ~~~~~~~~~~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~ 118 (292)
...+....+.+|+.+.|.|.+.+. |.+.+.|++++..+.. ..............|.|.+++.+|+|.|+|.+.|..|
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLEN--SEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCS--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcC--CCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 344567789999999999999997 8899999999986531 1111111111223899999999999999999999988
Q ss_pred CeeEEEEEEEE
Q psy15128 119 STTVRAFLQVT 129 (292)
Q Consensus 119 ~~~~~~~l~v~ 129 (292)
.......|.|.
T Consensus 83 ~~~~~~~l~V~ 93 (97)
T 2bk8_A 83 EDSSYAELFVK 93 (97)
T ss_dssp EEEEEEEEEET
T ss_pred eEeEEEEEEEE
Confidence 87777766664
No 413
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.50 E-value=5.1e-14 Score=107.29 Aligned_cols=118 Identities=20% Similarity=0.293 Sum_probs=79.4
Q ss_pred cccCCcCCCeeEEEEEEec-ccccccccEEEEEeC------CCcEEe-CCCccEEecCCcEEEEEEEeeeCCC--eeEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNM-VGERETKPALLTVHA------PPSFVV-RPQDQKVGLNGIASFQCVAEGSPLP--SVFWT 71 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~-~~~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~--~v~W~ 71 (292)
|.+++.+|+|.|+|.+.+. ........+.|.|.. +|.+.. .+....+.+|+.++|.|.+.+.+++ .+.|+
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 183 (268)
T 3pl6_D 104 IQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 183 (268)
T ss_dssp ECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEE
Confidence 7899999999999999874 222222336788875 455443 3444455669999999999986554 89999
Q ss_pred ECCeEEeeccCC---------CcceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcC
Q psy15128 72 QEGSQVLMFPGN---------AYGHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGS 119 (292)
Q Consensus 72 ~~~~~~~~~~~~---------~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~ 119 (292)
+++..+...... ......+.....|.|.....+| .|.|+|.+.+....
T Consensus 184 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 184 VNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp ESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 998776311000 0011122334568888887777 99999999987544
No 414
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.1e-13 Score=90.32 Aligned_cols=80 Identities=21% Similarity=0.368 Sum_probs=61.8
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|+.+.... .++.+..+. .....|.|..+...|+|.|+|.|.|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~~~~~~-~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~N~ 88 (110)
T 2dm2_A 15 LKHYKIFEGMPVTFTCRV-AGNPKPKIYWFKDGKQISPKS-DHYTIQRDL----DGTCSLHTTASTLDDDGNYTIMAANP 88 (110)
T ss_dssp CCCEEEETTCCEEEEEEB-CCSSCCEEEEECSSCBCCTTC-SSEEEEECT----TCEEEEEESSCCTTTCSCCEEEEECT
T ss_pred CcCeEEeCCCeEEEEEEE-EecCCCEEEEEECCEECCCCC-CeEEEEECC----CcEEEEEECCCChhhCEEEEEEEEEC
Confidence 356788999999999998 899999999999999885322 233332211 01125889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 89 ~g~~~~ 94 (110)
T 2dm2_A 89 QGRISC 94 (110)
T ss_dssp TCCEEE
T ss_pred CCeEEE
Confidence 998764
No 415
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=1.1e-13 Score=103.86 Aligned_cols=144 Identities=15% Similarity=0.173 Sum_probs=89.7
Q ss_pred eCCCCceecCCCeEEEEeEeccC--CCCceEEEeCC--eeCC---------------C-CCccEEEc-----CCCcEEEE
Q psy15128 141 VGPSNQTLPLHSVAFLPCQAVGS--PPPHIRWYKNG--NSLP---------------P-EDTRINVS-----SSGSLQID 195 (292)
Q Consensus 141 ~~~~~~~~~~g~~v~l~C~~~~~--p~~~~~W~~~~--~~l~---------------~-~~~~~~~~-----~~~~l~i~ 195 (292)
..+....+.+|+.++|.|.+.+. +.+.+.|+|+. ..+. . ...++... ...+|.|.
T Consensus 6 q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (242)
T 1hxm_B 6 QPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIH 85 (242)
T ss_dssp CCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEEC
T ss_pred cCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEEC
Confidence 34556678899999999999775 56789999843 2110 0 12344332 12368888
Q ss_pred eeecCCCCCCc---------------------ceEE-----------------------eCCCceEEEeeCCCCCCC-Ce
Q psy15128 196 VLRDDFRAEPK---------------------DTRV-----------------------ASGETALLECGPPKGQPE-PT 230 (292)
Q Consensus 196 ~~~~~d~g~~~---------------------~~~~-----------------------~~g~~~~l~C~~~~~~p~-~~ 230 (292)
+++.+|+|.|. ...+ ..|+.++|.|.+....|. +.
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (242)
T 1hxm_B 86 NVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIK 165 (242)
T ss_dssp SCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEE
T ss_pred CCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeE
Confidence 88888888220 0111 138889999998433465 79
Q ss_pred EEEeEcCe-EeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecccccc
Q psy15128 231 LHWKKNGQ-FIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQ 289 (292)
Q Consensus 231 ~~W~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~ 289 (292)
+.|+++|. .+......... ..++.+.. ...|.|..... + |.|+|.|.|..|...
T Consensus 166 v~W~~~~~~~l~~~~~~~~~-~~~~~~~~--~s~L~i~~~~~-~-g~y~C~v~n~~~~~~ 220 (242)
T 1hxm_B 166 IHWEEKKSNTILGSQEGNTM-KTNDTYMK--FSWLTVPEKSL-D-KEHRCIVRHENNKNG 220 (242)
T ss_dssp EEEEESSSCCCCCCEECCCE-ECSSSEEE--EEEEEECTGGG-G-SCEEEEEEETTSGGG
T ss_pred EEEEcCCCEeecCcccccee-cCCCcEEE--EEEEEEccccC-C-CEEEEEEEeCCCCCC
Confidence 99999987 56322111111 23333322 23466665554 4 999999999998764
No 416
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=8.4e-14 Score=92.16 Aligned_cols=76 Identities=22% Similarity=0.388 Sum_probs=61.5
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ...++....++ .|.|..+..+|+|.|+|.|.|.
T Consensus 15 p~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~g~~~~~-~~~~~~~~~~~--------~L~i~~v~~~D~G~Y~C~a~n~ 84 (118)
T 2eo9_A 15 PVNQTVAVDGTFVLSCVA-TGSPVPTILWRKDGVLVST-QDSRIKQLENG--------VLQIRYAKLGDTGRYTCIASTP 84 (118)
T ss_dssp CCCEEEETTCEEEEECBC-CCSSCCEEEEEESSSBCCT-TSTTEEEEETT--------EEEEESCCGGGCCCEEEEEECS
T ss_pred CCCEEEcCCCeEEEEEEE-EecCCCEEEEEECCEECcC-CCCeEEEccCC--------EEEEccCCcCCCEEEEEEEEcC
Confidence 456788999999999998 8999999999999988853 23333333222 6889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|....
T Consensus 85 ~g~~~~ 90 (118)
T 2eo9_A 85 SGEATW 90 (118)
T ss_dssp SCEEEE
T ss_pred CCcEEE
Confidence 998753
No 417
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.49 E-value=6.2e-14 Score=89.72 Aligned_cols=77 Identities=21% Similarity=0.263 Sum_probs=61.4
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... .++.+..++ ....|.|..+..+|+|.|+|.|.|..
T Consensus 14 ~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~ 85 (99)
T 3puc_A 14 QDTTVSSDSVAKFAVKA-TGEPRPTAIWTKDGKAITQG--GKYKLSEDK-----GGFFLEIHKTDTSDSGLYTCTVKNSA 85 (99)
T ss_dssp CCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECCSS--SSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccEEEeCCCcEEEEEEE-EecCCCEEEEEECCEECcCC--CCEEEEEeC-----CEEEEEECCCCcccCEEEEEEEEeCC
Confidence 46788999999999998 88999999999999988633 333333221 12258899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 86 g~~~~ 90 (99)
T 3puc_A 86 GSVSS 90 (99)
T ss_dssp EEEEE
T ss_pred CcEeE
Confidence 98754
No 418
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.49 E-value=4.2e-14 Score=106.72 Aligned_cols=121 Identities=16% Similarity=0.247 Sum_probs=66.0
Q ss_pred cccCCcCCCeeEEEEEEecccc------------cccccEEEEEeC----CCcEEeCCCccEEecCCcEEEEEEEeee-C
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVGE------------RETKPALLTVHA----PPSFVVRPQDQKVGLNGIASFQCVAEGS-P 64 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~ 64 (292)
|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+........+.+|+.++|.|.+.+. |
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEEC
Confidence 7899999999999999986541 122336888875 3544433323345679999999999886 7
Q ss_pred CC-eeEEEECCeEEeeccCCC--cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 65 LP-SVFWTQEGSQVLMFPGNA--YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 65 ~~-~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
.+ .+.|++++..+....... .....+...+.|.|.++..+| |.|+|.+.|........
T Consensus 163 ~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~ 223 (257)
T 3bn9_D 163 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 223 (257)
T ss_dssp SCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEE
T ss_pred CCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEE
Confidence 76 899999886531110000 000112234568888888778 99999999976544433
No 419
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=6.7e-14 Score=94.70 Aligned_cols=82 Identities=21% Similarity=0.399 Sum_probs=63.0
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCeeEEEECCe----------------------------EEeeccCCCcceeEEee--
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGS----------------------------QVLMFPGNAYGHLHVTQ-- 92 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~----------------------------~~~~~~~~~~~~~~~~~-- 92 (292)
+....+.+|+.+.|.|.+.|.|.|.+.|+|++. .+. . ...+.....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~---~~~r~~i~~~~ 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC-E---TEGRVRVETTK 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC-S---CSSSCEEEEET
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeec-C---CCCeEEEEeCC
Confidence 556788999999999999999999999999882 110 0 111222222
Q ss_pred -ecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 93 -EGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 93 -~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
...|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 101 ~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 101 DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 247999999999999999999999997777666655
No 420
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=1.9e-13 Score=87.57 Aligned_cols=84 Identities=24% Similarity=0.372 Sum_probs=63.7
Q ss_pred CccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+....... ..........|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 94 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG-GYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTT-CCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccc-cEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEE
Confidence 34567889999999999999999999999998764221111 11122234589999999999999999999998876666
Q ss_pred EEEEE
Q psy15128 124 AFLQV 128 (292)
Q Consensus 124 ~~l~v 128 (292)
+.|.|
T Consensus 95 ~~l~V 99 (100)
T 3caf_A 95 YHLDV 99 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65554
No 421
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.2e-13 Score=86.98 Aligned_cols=86 Identities=27% Similarity=0.271 Sum_probs=66.2
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+....+.+|+.+.|.|.+ .|.+.+.|+|++..+.. ..+..... ...|.|.++..+|+|.|+|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~-----~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~ 79 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQE-----SDRLKVVQKGRIHKLVIANALTEDEGDYVFA 79 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCC-----CSSEEEEECSSEEEEEESSCCGGGCSEEEEE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCC-----CCcEEEEEeCCEEEEEECCCChhhCEEEEEE
Confidence 5566677788899999999999999 78889999999987631 12222222 24799999999999999999
Q ss_pred EEeCCcCeeEEEEEEEEe
Q psy15128 113 ALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~ 130 (292)
+.|. .....+.|.|..
T Consensus 80 a~N~--~~~~~a~L~V~~ 95 (100)
T 2yuz_A 80 PDAY--NVTLPAKVHVIS 95 (100)
T ss_dssp ESSS--CCCEEEEEEEEC
T ss_pred EcCC--CeeEEEEEEEeC
Confidence 9987 445566676653
No 422
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.49 E-value=4.6e-14 Score=89.51 Aligned_cols=73 Identities=14% Similarity=0.237 Sum_probs=59.3
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.| +.+.|+++|..+. ...++.+.. ..|.|..+...|+|.|+|.|.|.
T Consensus 16 ~~~~~v~~G~~v~l~C~~-~g~p-p~i~W~k~g~~~~--~~~~~~~~~---------~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLV--ESNRTRITG---------EEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp BCCEEECTTSCEEEECCE-ESSC-CEEEEEBTTBCCC--CCSSEEECS---------SEEEESSCCGGGSEEEEEEEEET
T ss_pred cceEEEcCCCeEEEEEEC-CCCC-CceEEEECCEecC--CCCCEEEeC---------CEEEECCCChHHCEEEEEEeccC
Confidence 356788999999999998 7777 7999999999885 333444332 26889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 83 ~g~~~~ 88 (95)
T 2ckn_A 83 SGSDTT 88 (95)
T ss_dssp TEEEEE
T ss_pred CCcEEE
Confidence 998754
No 423
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=89.38 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=68.6
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeee---CCCeeEEEECCeEEeeccCCCcceeEE---------eeecEEEEccCCCC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGS---PLPSVFWTQEGSQVLMFPGNAYGHLHV---------TQEGTLRIQGVQKE 104 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~v~W~~~~~~~~~~~~~~~~~~~~---------~~~~~l~i~~~~~~ 104 (292)
+.+...|..+.+.+|++++|.|.+.+. |.|.|.|+|+... ...... ..+..+ .....|+|.+++..
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWL-ELGSKS-GARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTC-CCCCST-TSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEe-ccCCCC-ccEEEeccccccccccceEEEEEeeCChh
Confidence 456677888899999999999999874 7889999997421 111100 011111 12468999999999
Q ss_pred CCeEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 105 DAGFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
|+|.|+|.+.|..+..+..+.|.|..
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 99999999999999888888888763
No 424
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.49 E-value=1.2e-13 Score=102.89 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=77.3
Q ss_pred cccCCcCCCeeEEEEEEeccc-------ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeeeCC--Cee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-------ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGSPL--PSV 68 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~--~~v 68 (292)
|.+++.+|+|.|.|.+.+..+ ......+.|.|. .+|.+...+....+..|+.++|.|.+.+.++ ..+
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 166 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 166 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEE
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEE
Confidence 789999999999999986521 112233677776 3455543333445667999999999988543 357
Q ss_pred EEEECCeEEeeccCC--CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 69 FWTQEGSQVLMFPGN--AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 69 ~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
.|++++..+...... ......+...+.|.|.+....| |.|+|.+.|..+.......+.
T Consensus 167 ~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~ 226 (232)
T 3qhz_H 167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 226 (232)
T ss_dssp EEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeC
Confidence 899988532111000 0011122334578999998888 999999999877666555443
No 425
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=90.94 Aligned_cols=81 Identities=21% Similarity=0.423 Sum_probs=63.5
Q ss_pred CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEee
Q psy15128 204 EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKN 283 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n 283 (292)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ...++.+..++. ....|.|..+...|+|.|+|.|.|
T Consensus 21 ~p~~~~v~~G~~v~L~C~~-~g~p~p~v~W~k~~~~~~~-~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~N 94 (116)
T 2kkq_A 21 KPQSKKVLEGDSVKLECQI-SAIPPPKLFWKRNNEMVQF-NTDRISLYQDNT----GRVTLLIKDVNKKDAGWYTVSAVN 94 (116)
T ss_dssp CCCCEEEETTEEEEEEEEB-CCBSCCEEEEEETTEECCC-CBTTEEEEECTT----CEEEEEEEEECGGGCEEEEEEEEE
T ss_pred CCCcEEEeCCCcEEEEEEE-eccCCCEEEEEECCEECcC-CCCeEEEEeCCC----CeEEEEECCCCcccCEEEEEEEEc
Confidence 4567889999999999998 8999999999999998853 233443332221 122588999999999999999999
Q ss_pred ccccccc
Q psy15128 284 IRNQQQH 290 (292)
Q Consensus 284 ~~g~~~~ 290 (292)
..|..+.
T Consensus 95 ~~G~~~~ 101 (116)
T 2kkq_A 95 EAGVTTC 101 (116)
T ss_dssp TTEEEEE
T ss_pred CCCeEEE
Confidence 9998754
No 426
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.48 E-value=1.2e-13 Score=109.70 Aligned_cols=109 Identities=18% Similarity=0.255 Sum_probs=68.5
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
.+....+.+|+.+.|.|.+.| |.+.+.|++++..+.... ....+... .++.|.|.+++.+|+|.|+|.|.|..|...
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~-~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~ 328 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQ-GSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNET 328 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSC-CSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeec-ccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccE
Confidence 345678999999999999998 889999999776543221 22223444 677999999999999999999999988777
Q ss_pred EEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceE
Q psy15128 122 VRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIR 169 (292)
Q Consensus 122 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~ 169 (292)
..+.+.|.. . ...|+.++|.|.+.|.|.|.+.
T Consensus 329 ~~~~l~V~~-----~-----------~~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 329 LSVELKVYN-----F-----------TLHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEES-----S-----------CCC-------------------
T ss_pred EEEEEEEEe-----e-----------eccCCceEEEEEeCCCCCCccc
Confidence 777776642 1 1578899999999999988763
No 427
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.48 E-value=1.3e-12 Score=82.09 Aligned_cols=85 Identities=16% Similarity=0.095 Sum_probs=64.4
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+.+..+.+|+.++|.|.+.+ +.+.+.|+|++..+... .+.....+ ..|.|.+++.+|+|.|+|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~-----~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C 77 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS-----PDCEIIEDGKKHILILHNCQLGMTGEVSF 77 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB-----TTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC-----CCEEEEEECCEEEEEECCCChhhCEEEEE
Confidence 3567777888899999999999999976 45789999999876321 12223222 479999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+.|. ...+.|.|.
T Consensus 78 ~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 78 QAANT----KSAANLKVK 91 (93)
T ss_dssp EETTE----EEEEEEEEE
T ss_pred EECCC----cEEEEEEEE
Confidence 99763 345566654
No 428
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=88.02 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=56.3
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+.+..+.+|+.+.|.|.+ .|.+.+.|+|+|+++. .+.++.+..++. ...|.|..+..+|+|.|+|.|.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~--~~~r~~i~~~~~-----~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 14 LTDQTVNLGKEICLKCEI---SENIPGKWTKNGLPVQ--ESDRLKVVQKGR-----IHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCEEEETTSCCCEEEEC---SSCCCEEEEETTEECC--CCSSEEEEECSS-----EEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCceEEcCCCCEEEEEEe---CCCCeEEEEECCEECC--CCCcEEEEEeCC-----EEEEEECCCChhhCEEEEEEEcCC
Confidence 457789999999999997 6888999999999986 334444433321 236889999999999999999998
No 429
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=4.1e-14 Score=92.45 Aligned_cols=80 Identities=21% Similarity=0.409 Sum_probs=63.0
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+............++ ...|.|..+..+|+|.|+|.|.|.
T Consensus 16 ~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~ 88 (110)
T 2dm3_A 16 PGDLTVQEGKLCRMDCKV-SGLPTPDLSWQLDGKPVRPDSAHKMLVRENG------VHSLIIEPVTSRDAGIYTCIATNR 88 (110)
T ss_dssp CCEEEEESSSCBCCEEEE-ECSSCCEEECBBSSSBCCCCSSEEEEECTTS------CEEEEESSCCGGGCSBBCEEEECS
T ss_pred CCcEEEeCCCEEEEEEEE-EEcCCCEEEEEECCEECCCCCceEEEEecCC------eEEEEEeeCCcccCEEEEEEEECC
Confidence 356788999999999998 7999999999999988864433333333221 236889999999999999999999
Q ss_pred ccccccC
Q psy15128 285 RNQQQHG 291 (292)
Q Consensus 285 ~g~~~~~ 291 (292)
.|..+.+
T Consensus 89 ~g~~~~~ 95 (110)
T 2dm3_A 89 AGQNSFS 95 (110)
T ss_dssp SCEEEEC
T ss_pred CCEEEEE
Confidence 9987643
No 430
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=8.9e-14 Score=92.01 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=61.0
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
.....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+. . .++.+... .....|.|..+...|+|.|+|.|.|.
T Consensus 31 ~~~~~v~~G~~~~l~C~~-~g~P~p~i~W~k~g~~l~-~--~~~~~~~~-----~~~~~L~i~~~~~~D~G~Y~C~a~N~ 101 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPF-QGKPRPQVVWTKGGAPLD-T--SRVHVRTS-----DFDTVFFVRQAARSDSGEYELSVQIE 101 (118)
T ss_dssp SSCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECC-C--SSCEEEEC-----SSEEEEEESSCCTTTCEEEEEEEECS
T ss_pred CCCEEEECCCEEEEEEEE-ccCCCCEEEEEECCEECC-C--CcEEEEEC-----CCeEEEEECCCChhcCEEEEEEEEeC
Confidence 457788999999999998 899999999999999884 2 22222211 11235889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|.++.
T Consensus 102 ~G~~~~ 107 (118)
T 2e7c_A 102 NMKDTA 107 (118)
T ss_dssp SCEECC
T ss_pred CCeEEE
Confidence 998764
No 431
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.47 E-value=1.2e-13 Score=103.76 Aligned_cols=119 Identities=22% Similarity=0.273 Sum_probs=78.8
Q ss_pred cccCCcCCCeeEEEEEEecc-----cccccccEEEEEeC------CCcEEe-CCCccEEecCCcEEEEEEEeee-CCC-e
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV-----GERETKPALLTVHA------PPSFVV-RPQDQKVGLNGIASFQCVAEGS-PLP-S 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~-----~~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~ 67 (292)
|.+++.+|+|.|+|.+.+.. .......+.|.|.. +|.+.. .+....+..|+.++|.|.+.+. |.+ .
T Consensus 78 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~ 157 (245)
T 3nfj_J 78 SKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVE 157 (245)
T ss_dssp ESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred ECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEE
Confidence 78999999999999999832 22222336788875 455443 2333335569999999999985 444 7
Q ss_pred eEEEECCeEEeeccCCCc---------ceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcCe
Q psy15128 68 VFWTQEGSQVLMFPGNAY---------GHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGST 120 (292)
Q Consensus 68 v~W~~~~~~~~~~~~~~~---------~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~~ 120 (292)
+.|++++..+........ ....+.....|.|.....+| .|.|+|.+.+.....
T Consensus 158 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 158 LSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred EEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 899999987642110000 11122334578888888888 679999999875543
No 432
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.47 E-value=9.3e-14 Score=90.42 Aligned_cols=77 Identities=13% Similarity=0.264 Sum_probs=54.0
Q ss_pred CCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEee
Q psy15128 204 EPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKN 283 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n 283 (292)
.+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ..+...... ...|.|..+..+|+|.|+|.|.|
T Consensus 16 ~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~--~~~~~~~~~-------~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 16 NLENQTTSIGESIEVSCTA-SGNPPPQIMWFKDNETLVE--DSGIVLKDG-------NRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp CCCCEEEETTCCEEEECBC-C----CCEEEEESSSBCCC--BTTEEEETT-------TTEEEECSCCGGGCEEEEEEEC-
T ss_pred CCCCeEEeCCCeEEEEEEC-cCcCCCeEEEEECCeEccc--CCCeEEeCC-------CcEEEEeecCcccCEEEEEEEEe
Confidence 3467788999999999998 8999999999999988753 223322222 23688999999999999999999
Q ss_pred ccccccc
Q psy15128 284 IRNQQQH 290 (292)
Q Consensus 284 ~~g~~~~ 290 (292)
..|....
T Consensus 86 ~~g~~~~ 92 (108)
T 3kvq_A 86 VLGCAKV 92 (108)
T ss_dssp ---CEEE
T ss_pred CCCceEE
Confidence 9998754
No 433
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.47 E-value=6.5e-14 Score=90.13 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=57.3
Q ss_pred eCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 211 ASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 211 ~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
..++.+.|.|.+ .|.|.|.++|+++|+++.........+...+.. .....|.|..+..+|+|.|+|.|+|..|+++.
T Consensus 14 ~~~~~~~~~c~v-~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 90 (103)
T 1wwb_X 14 TSDHHWCIPFTV-KGNPKPALQWFYNGAILNESKYICTKIHVTNHT--EYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEK 90 (103)
T ss_dssp CCCCEEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEEEECSS--EEEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred eECcEEEEEEEE-EEeCCCEEEEEECCEECCCCCcEeEEEEecCCc--EEEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 357789999998 999999999999999986432211222111110 11234889999999999999999999999865
Q ss_pred C
Q psy15128 291 G 291 (292)
Q Consensus 291 ~ 291 (292)
+
T Consensus 91 ~ 91 (103)
T 1wwb_X 91 Q 91 (103)
T ss_dssp E
T ss_pred E
Confidence 3
No 434
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=83.56 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=57.4
Q ss_pred CccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 44 QDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
..+.+.+|+.+.|.|.+.+ |.+.+.|+|++..+.. +.............|.|.+++.+|+|.|+|.| +.....
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~~~ 76 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLAS--QGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDSRI 76 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCC--CSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTCEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccc--cccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEEEE
Confidence 4567889999999999866 8889999999987742 22211111122347999999999999999987 444556
Q ss_pred EEEEEE
Q psy15128 124 AFLQVT 129 (292)
Q Consensus 124 ~~l~v~ 129 (292)
+.|.|.
T Consensus 77 a~l~V~ 82 (84)
T 2lu7_A 77 FLVSVE 82 (84)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 666654
No 435
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.46 E-value=4.8e-13 Score=84.00 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=64.4
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
++.+...|....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~a~n 71 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----------TKKLYMVPYVDLEHQGTYWCHVYN 71 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-----------CSSEEEESSCCGGGCEEEEEEEEC
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-----------CCCeEEECCCCHHhCEEEEEEEEc
Confidence 345566677778999999999999999999999999998765311 135899999999999999999999
Q ss_pred CCcCee-EEEEEEE
Q psy15128 116 VAGSTT-VRAFLQV 128 (292)
Q Consensus 116 ~~~~~~-~~~~l~v 128 (292)
..+... ....|.|
T Consensus 72 ~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 72 DRDSQDSKKVEIII 85 (91)
T ss_dssp SSCEEECCCEEEEE
T ss_pred CCCCEEeeeEEEEE
Confidence 887533 2344444
No 436
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=4.8e-14 Score=90.23 Aligned_cols=75 Identities=23% Similarity=0.338 Sum_probs=59.9
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... ..... .....|.|..+..+|+|.|+|.|.|.
T Consensus 18 ~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~g~~~~~~--~~~~~--------~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 18 LKDCAVIEGQDFVLQCSV-RGTPVPRITWLLNGQPIQYA--RSTCE--------AGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp CCCEEECTTCCEEEECEE-EEESCCCCEEEESSSBCSSC--CCEEE--------TTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred CCCCEEeCCCeEEEEEEE-eeeCCCeEEEEECCEECccc--ceEee--------CCeEEEEECCCChhhCEEEEEEEEEC
Confidence 356788999999999998 89999999999999887522 11111 11236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 87 ~g~~~~ 92 (99)
T 2yr3_A 87 LGQVSC 92 (99)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 998764
No 437
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.46 E-value=1.6e-13 Score=90.71 Aligned_cols=83 Identities=23% Similarity=0.389 Sum_probs=59.8
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCC---ceEEecCCCccccccccccccccccccccceeEEEE
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESS---KRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIA 281 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a 281 (292)
+....+.+|+.+.|.|.+ .|.|.|.+.|+++|..+..... .......++... ...+.+..+...|+|.|+|.|
T Consensus 16 p~~~~v~~G~~v~L~C~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~v~~~D~G~Y~C~a 91 (117)
T 2v9t_A 16 PSDLIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLF---FLRIVHGRKSRPDEGVYVCVA 91 (117)
T ss_dssp CCCEEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEE---ESSCCCBTTBCSSCEEEEEEE
T ss_pred CCCEEEcCCCcEEEEEEC-CccCCCeEEEEECCEeccccCCCCcceeEEecCCcEE---EEEEEeCCCCcCcCEEEEEEE
Confidence 346778999999999998 8999999999999998853321 122222232211 112344467899999999999
Q ss_pred eecccccccC
Q psy15128 282 KNIRNQQQHG 291 (292)
Q Consensus 282 ~n~~g~~~~~ 291 (292)
.|..|.+..+
T Consensus 92 ~N~~G~~~s~ 101 (117)
T 2v9t_A 92 RNYLGEAVSH 101 (117)
T ss_dssp EETTEEEECC
T ss_pred EeCccceEee
Confidence 9999998643
No 438
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.46 E-value=1.9e-14 Score=93.18 Aligned_cols=78 Identities=24% Similarity=0.479 Sum_probs=62.2
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+.. ..++.+.... ....|.|..+...|+|.|+|.|.|.
T Consensus 21 p~~~~v~~G~~v~L~C~~-~g~p~p~v~W~k~g~~l~~--~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 21 PRSMTVYEGESARFSCDT-DGEPVPTVTWLRKGQVLST--SARHQVTTTK-----YKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCCEEESSSSCEECCEEE-ECSSCCBCCBCSSSSCCTT--CSSEEEEECS-----SEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCCEEEeCCCcEEEEEEE-EEcCCCEEEEEECCEECCC--CCCEEEEECC-----CEEEEEECcCCchhCEEEEEEEEeC
Confidence 457789999999999998 8999999999999988853 3333332221 1236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 93 ~G~~~~ 98 (106)
T 1nct_A 93 EGKQEA 98 (106)
T ss_dssp SCBCCE
T ss_pred CCeEEE
Confidence 998654
No 439
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.46 E-value=1.1e-13 Score=89.98 Aligned_cols=77 Identities=26% Similarity=0.411 Sum_probs=61.5
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+. ...++.+..++ ....|.|..+..+|+|.|+|.|.|..
T Consensus 21 ~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~--~~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~n~~ 92 (107)
T 3irg_B 21 RPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLA--ASERLSFPADG-----AEHGLLLTAALPTDAGVYVCRARNAA 92 (107)
T ss_dssp CCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECC--CCSSEECCEET-----TEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred ccEEEeCCCeEEEEEEE-eecCCCEEEEEECCeECC--CCCcEEEEeCC-----CEEEEEEccCCHHhCEEEEEEEEcCC
Confidence 46788999999999998 899999999999999885 33344333322 12268899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 93 g~~~~ 97 (107)
T 3irg_B 93 GEAYA 97 (107)
T ss_dssp EEEEE
T ss_pred CcEEE
Confidence 98653
No 440
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.46 E-value=2.3e-13 Score=85.53 Aligned_cols=68 Identities=22% Similarity=0.367 Sum_probs=57.2
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..... ..|.|..+...|+|.|+|.|.|.
T Consensus 10 p~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~----------------~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 10 PTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHETK----------------KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCCEEECTTSCEEEECEE-ECSSCCEEEEEETTEECTTCCS----------------SEEEESSCCGGGCEEEEEEEECS
T ss_pred CCccEecCCCcEEEEEEe-ccCCCCEEEEEcCCeeCCcCCC----------------CeEEECCCCHHhCEEEEEEEEcC
Confidence 346678999999999998 8999999999999998753221 25788899999999999999999
Q ss_pred ccccc
Q psy15128 285 RNQQQ 289 (292)
Q Consensus 285 ~g~~~ 289 (292)
.|...
T Consensus 73 ~g~~~ 77 (91)
T 3bfo_A 73 RDSQD 77 (91)
T ss_dssp SCEEE
T ss_pred CCCEE
Confidence 99754
No 441
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.46 E-value=3e-13 Score=101.19 Aligned_cols=125 Identities=16% Similarity=0.214 Sum_probs=79.9
Q ss_pred cccCCcCCCeeEEEEEEeccc------------ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee-C
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG------------ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS-P 64 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~------------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~ 64 (292)
|.+++.+|+|.|.|.+.+..+ ......+.|.|. .+|.+...+....+..|+.++|.|.+.+. |
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 169 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeC
Confidence 789999999999999986532 112233567775 24555544444445679999999999884 4
Q ss_pred CC-eeEEEECCeEEeeccCC--CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 65 LP-SVFWTQEGSQVLMFPGN--AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 65 ~~-~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
.+ .+.|++++..+...... ......+...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 170 ~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 170 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp SCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred CCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 33 58899987532111100 0111122334578899988888 999999999876655555443
No 442
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=109.31 Aligned_cols=143 Identities=13% Similarity=0.110 Sum_probs=89.8
Q ss_pred CCCCce-ecCCCeEEEEeEeccC-CCC---ceEEEeCCeeCCCCCc--cE-----EEcCCCcEEEEeeecCCCCCC----
Q psy15128 142 GPSNQT-LPLHSVAFLPCQAVGS-PPP---HIRWYKNGNSLPPEDT--RI-----NVSSSGSLQIDVLRDDFRAEP---- 205 (292)
Q Consensus 142 ~~~~~~-~~~g~~v~l~C~~~~~-p~~---~~~W~~~~~~l~~~~~--~~-----~~~~~~~l~i~~~~~~d~g~~---- 205 (292)
.+.... +.+|+.++|.|.+.+. |.| .+.|++++..+..... .. .......|.|..+..+|+|.|
T Consensus 173 ~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~ 252 (376)
T 2aty_A 173 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 252 (376)
T ss_pred CcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEE
Confidence 333334 7789999999999887 323 5999999866532110 00 011122577777777777721
Q ss_pred ----------------------cceEE-------eCCCceEEEeeCCCC-CC-CCeEEEeEcCeEeccCCCceEEecCCC
Q psy15128 206 ----------------------KDTRV-------ASGETALLECGPPKG-QP-EPTLHWKKNGQFIDLESSKRVSILGDP 254 (292)
Q Consensus 206 ----------------------~~~~~-------~~g~~~~l~C~~~~~-~p-~~~~~W~~~g~~~~~~~~~~~~~~~~~ 254 (292)
+.+.+ ..|+.++|.|.+ .+ +| .+.|.|+++|+++............++
T Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~-~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dg 331 (376)
T 2aty_A 253 NSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMI-TDFFPEDITVEWQWNGQPAENYKNTQPIMNTNE 331 (376)
T ss_pred ecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEE-EEeECCCcEEEEEECCEECCCeEeCCceECCCC
Confidence 11111 247889999999 55 44 458999999998743222233334444
Q ss_pred ccccccccccccccccccccceeEEEEeecccc
Q psy15128 255 WFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQ 287 (292)
Q Consensus 255 ~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~ 287 (292)
.+. ....|.+......|.|.|+|.|+|..-.
T Consensus 332 ty~--~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 332 SYF--VYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CEE--EEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 443 2234666666667799999999998754
No 443
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.45 E-value=5.3e-13 Score=88.14 Aligned_cols=96 Identities=29% Similarity=0.487 Sum_probs=67.7
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEc-----cCCCCCCeE
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQ-----GVQKEDAGF 108 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-----~~~~~d~g~ 108 (292)
..+|.+...+....+.+|+.++|.|.+.|.|.|.+.|++++..+...............++.+.+. +++.+|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 346777777888889999999999999999999999999998764322111112222233444443 557899999
Q ss_pred EEEEEEeCCcCeeE-EEEEEEE
Q psy15128 109 FVCSALSVAGSTTV-RAFLQVT 129 (292)
Q Consensus 109 Y~C~~~~~~~~~~~-~~~l~v~ 129 (292)
|+|.+.|..|.... .+.+.+.
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEeCccceEeeeEEEEhh
Confidence 99999999886543 3444443
No 444
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.44 E-value=5e-13 Score=100.40 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=77.8
Q ss_pred cccCCcCCCeeEEEEEEecc---------------------cccccccEEEEEe----CCCcEEeCCCccEEecCCcEEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMV---------------------GERETKPALLTVH----APPSFVVRPQDQKVGLNGIASF 56 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~---------------------~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l 56 (292)
|.+++.+|+|.|.|.+.+.. .......+.|.|. .+|.+...+....+..|+.++|
T Consensus 82 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L 161 (248)
T 3u2s_H 82 MNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAAL 161 (248)
T ss_dssp ECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEE
T ss_pred ECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEE
Confidence 78999999999999998742 1122233677776 3444544444444567999999
Q ss_pred EEEEeee-C-CCeeEEEECCeEEeeccCC--CcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEE
Q psy15128 57 QCVAEGS-P-LPSVFWTQEGSQVLMFPGN--AYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQ 127 (292)
Q Consensus 57 ~C~~~~~-~-~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~ 127 (292)
.|.+.+. | ...+.|++++..+...... ......+...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 162 ~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 162 GCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 9999884 4 3479999987532111100 0111122334578899888888 999999999877665554443
No 445
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.4e-13 Score=87.95 Aligned_cols=73 Identities=14% Similarity=0.238 Sum_probs=58.2
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.| +.+.|++++..+.. ..++.+.. ..|.|..+...|+|.|+|.|.|.
T Consensus 10 p~~~~v~~G~~v~L~C~~-~g~p-p~i~W~k~g~~~~~--~~~~~~~~---------~~L~i~~v~~~D~G~Y~C~a~n~ 76 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRL-RDDV-QSINWLRDGVQLAE--SNRTRITG---------EEVEVQDSVPADSGLYACVTSSP 76 (99)
T ss_dssp EEECCBCTTSCEEEECCC-CSSC-CEEEEEESSSBCCC--CSSEEECS---------SEEEETTCCTTTCEEEEEEEEET
T ss_pred CcCeEEeCCCcEEEEEEe-cCCC-CeEEEEECCEECCC--CCcEEEEC---------CEEEEccCCHHHCEEEEEEEEeC
Confidence 345678899999999998 7776 69999999988753 23444332 26889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 77 ~g~~~~ 82 (99)
T 2cr3_A 77 SGSDTT 82 (99)
T ss_dssp TEEEEE
T ss_pred CceEEE
Confidence 998653
No 446
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.44 E-value=8.8e-14 Score=89.16 Aligned_cols=77 Identities=19% Similarity=0.338 Sum_probs=59.8
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCc-eEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK-RVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+...... ...... ....|.|..+...|+|.|+|.|.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRN-------QHWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp CEEEECTTCCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEG-------GGTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEecCCCEEEEEEEc-cccCCCEEEEEECCEEcccccccccEEEec-------CeEEEEEccCCcCCCEEEEEEEEeC
Confidence 46678899999999998 88999999999999988532211 111111 1236889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 88 ~g~~~~ 93 (100)
T 3caf_A 88 YGSINH 93 (100)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 998754
No 447
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.44 E-value=1.3e-12 Score=84.91 Aligned_cols=95 Identities=21% Similarity=0.346 Sum_probs=68.0
Q ss_pred eCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccC---CCcceeEEe----eecEEEEccCCCCCC
Q psy15128 34 HAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPG---NAYGHLHVT----QEGTLRIQGVQKEDA 106 (292)
Q Consensus 34 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~---~~~~~~~~~----~~~~l~i~~~~~~d~ 106 (292)
..+|.+...+....+.+|++++|.|.+.+.|.+.+.|++++........ ....+.... ....|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 4456666777888999999999999999988889999998762221111 011222222 355899999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
|.|+|.+.+ .+.....+.|.|.
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEE
T ss_pred eEEEEEEEc-CCCcEEEEEEEEE
Confidence 999999999 6766767777665
No 448
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.44 E-value=2.8e-11 Score=89.90 Aligned_cols=132 Identities=17% Similarity=0.298 Sum_probs=80.5
Q ss_pred CccEEecCCcEEEEEEEeee--CCCeeEEEECC--e--EEe-eccC---------CCcceeEEeeec-----EEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S--QVL-MFPG---------NAYGHLHVTQEG-----TLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~--~~~-~~~~---------~~~~~~~~~~~~-----~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+. +...+.|+|.. . ... .... ....++....+. .|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 35678899999999999752 34579999842 1 111 1110 112344333222 59999999
Q ss_pred CCCCeEEEEEEEeCC-----cCe---eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceEEEe
Q psy15128 103 KEDAGFFVCSALSVA-----GST---TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWYK 172 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~-----~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~~ 172 (292)
.+|+|.|.|.+.+.. +.. .....|.|.... ..+|.+...+....+..|+.++|.|.+.+. | .+.+.|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W-- 164 (230)
T 3n9g_H 88 SEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-- 164 (230)
T ss_dssp GGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC-CBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--
T ss_pred hhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC-CCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--
Confidence 999999999998653 111 122345553221 233444433333445689999999999775 4 345899
Q ss_pred CCeeCC
Q psy15128 173 NGNSLP 178 (292)
Q Consensus 173 ~~~~l~ 178 (292)
++..+.
T Consensus 165 ~~~~~~ 170 (230)
T 3n9g_H 165 NSGALT 170 (230)
T ss_dssp GGGTBC
T ss_pred CCcccC
Confidence 655543
No 449
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=84.59 Aligned_cols=90 Identities=28% Similarity=0.446 Sum_probs=69.6
Q ss_pred EEEEEeC-CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeec---EEEEccCCCC
Q psy15128 29 ALLTVHA-PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG---TLRIQGVQKE 104 (292)
Q Consensus 29 ~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~ 104 (292)
+.|.|.. +|.+...+....+.+|+.+.|.|.+.+. +.+.|+|++..+.. ..+.....++ .|.|.++..+
T Consensus 11 ~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
T 2edh_A 11 AMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRD-----GDRHSLRQDGARCELQIRGLVAE 83 (113)
T ss_dssp CCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCC-----SSSEEEEEETTEEEEEECSCCST
T ss_pred EEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCC-----CCcEEEEECCCEEEEEECCCChh
Confidence 7788874 4577788888899999999999999764 68999999886531 1233333344 7999999999
Q ss_pred CCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 105 DAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
|+|.|+|.+ +.....+.|.|.
T Consensus 84 D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 84 DAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp TCEEEEEEE----TTEEEEEEEEEC
T ss_pred hCEEEEEEe----CCCCEEEEEEEe
Confidence 999999999 556666667665
No 450
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.44 E-value=6.9e-13 Score=85.89 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=66.0
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++++..+.. . .+.....+ ..|.|.+++.+|+|.|+|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~--~---~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 80 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRP--S---KRITISHVGRFHKLVIDDVRPEDEGDYTF 80 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCC--C---SSCEEEEETTEEEEEESSCCTTTCSCEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcC--C---CCEEEEEeCCEEEEEECCCCcCCCEEEEE
Confidence 35677778888999999999999999988776 999999986632 1 12222222 489999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+.|. .....+.|.|.
T Consensus 81 ~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 81 VPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EEETS--CCCCCBCEEEE
T ss_pred EEccC--CceEEEEEEEE
Confidence 99987 33344555554
No 451
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.43 E-value=8.7e-13 Score=84.78 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=60.2
Q ss_pred ecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCc-ceeEE----eeecEEEEccCCCCCCeEEEEEEEeCCcCeeEE
Q psy15128 49 GLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAY-GHLHV----TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVR 123 (292)
Q Consensus 49 ~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~-~~~~~----~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~ 123 (292)
..++.+.|.|.+.|.|.|.+.|++++..+... ... ..... ...+.|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~--~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNES--KYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCC--SSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCC--CcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 35778999999999999999999999876422 110 11111 123459999999999999999999999988877
Q ss_pred EEEEEE
Q psy15128 124 AFLQVT 129 (292)
Q Consensus 124 ~~l~v~ 129 (292)
+.|.|.
T Consensus 92 ~~l~V~ 97 (103)
T 1wwb_X 92 ISAHFM 97 (103)
T ss_dssp EEECCS
T ss_pred EEEEEC
Confidence 777664
No 452
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.43 E-value=5.3e-13 Score=84.57 Aligned_cols=72 Identities=19% Similarity=0.338 Sum_probs=57.8
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+ .+.+.|+++|..+. ...++.... ..|.|..+...|+|.|+|.|.|.
T Consensus 8 p~~~~v~~G~~~~l~C~~-~~--~p~v~W~k~g~~~~--~~~~~~~~~---------~~L~i~~~~~~D~G~Y~C~a~n~ 73 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCML-KD--AAVISWTKDGVHLG--PNNRTVLIG---------EYLQIKGATPRDSGLYACTAART 73 (95)
T ss_dssp CEEEEECTTSCEEEECCC-CT--TCEEEEEETTEEEC--CCSSEEEET---------TEEEECSCCGGGCEEEEEEEECS
T ss_pred CCcEEECCCCEEEEEEEe-CC--CCEEEEEECCEECC--CCceEEEeC---------CEEEECcCCcccCEEEEEEEccC
Confidence 456788999999999998 55 47999999999885 333444332 26889999999999999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|..+.
T Consensus 74 ~g~~~~ 79 (95)
T 4hwu_A 74 VDSETW 79 (95)
T ss_dssp SCEEEE
T ss_pred CCcEEE
Confidence 997654
No 453
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.43 E-value=1.1e-12 Score=83.69 Aligned_cols=79 Identities=29% Similarity=0.420 Sum_probs=61.9
Q ss_pred CCccEEecCCcEEEEEEEe-eeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCee
Q psy15128 43 PQDQKVGLNGIASFQCVAE-GSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTT 121 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~ 121 (292)
+....+.+|+.++|.|.+. +.|.+.+.|++++..... ......++.|.|.+++.+|+|.|+|.+.|..|...
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~-------~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP-------SRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQ 89 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC-------TTEEEETTEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC-------ceeecCCCEEEEeCCChhhCEEEEEEecCCCCccc
Confidence 3556788999999999998 578899999997543211 11233466899999999999999999999988777
Q ss_pred EEEEEEE
Q psy15128 122 VRAFLQV 128 (292)
Q Consensus 122 ~~~~l~v 128 (292)
....|.|
T Consensus 90 ~~~~l~V 96 (98)
T 1gl4_B 90 GTATLHV 96 (98)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 6666665
No 454
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=8.8e-13 Score=84.89 Aligned_cols=85 Identities=18% Similarity=0.238 Sum_probs=63.0
Q ss_pred cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEEEEEE
Q psy15128 38 SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 38 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+...+....+.+|+.++|.|.+.+ |.+.+.|+|++..+...... +..... ...|.|.+++.+|+|.|+|.+.
T Consensus 9 ~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~---~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 9 MVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKS---RYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp CCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTC---SEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred eeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCce---EEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 3556677788999999999999977 66899999999876422111 222222 2589999999999999999997
Q ss_pred eCCcCeeEEEEEEEEe
Q psy15128 115 SVAGSTTVRAFLQVTS 130 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~ 130 (292)
| ....+.|.|..
T Consensus 85 n----~~~~~~l~V~~ 96 (103)
T 1x44_A 85 G----GQSSAKLSVDL 96 (103)
T ss_dssp T----EEEEEEEEEEC
T ss_pred C----CcEEEEEEEeC
Confidence 6 35556666653
No 455
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.42 E-value=7.3e-13 Score=88.16 Aligned_cols=86 Identities=19% Similarity=0.242 Sum_probs=62.3
Q ss_pred ccEEecCCcEEEEEEEeee--CCCeeEEEECCeEEeec--cCCCccee----EEeeecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 45 DQKVGLNGIASFQCVAEGS--PLPSVFWTQEGSQVLMF--PGNAYGHL----HVTQEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~~~~~~~--~~~~~~~~----~~~~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
...+.+|+.+.|.|.+.+. |.+.+.|++++..+... ........ .....+.|.|.+++.+|+|.|+|.+.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 3478899999999999984 44689999987643210 00000000 1123558999999999999999999999
Q ss_pred CcCeeEEEEEEEEe
Q psy15128 117 AGSTTVRAFLQVTS 130 (292)
Q Consensus 117 ~~~~~~~~~l~v~~ 130 (292)
.|.....+.|.|..
T Consensus 97 ~g~~~~~~~l~V~~ 110 (122)
T 3s35_X 97 LMTKKNSTFVRVHE 110 (122)
T ss_dssp SCEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEec
Confidence 88888777777764
No 456
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.42 E-value=4e-13 Score=93.25 Aligned_cols=78 Identities=19% Similarity=0.277 Sum_probs=61.2
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+..|+.+.|.|.+ .+.|.+.+.|+++|..+.......+....++ ...|.|..+...|+|.|+|.|.|..
T Consensus 49 ~~~~v~~G~~v~L~C~~-~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~------~~~L~I~~v~~~D~G~Y~C~a~N~~ 121 (154)
T 1fhg_A 49 LDMEVVEGSAARFDCKV-EGYPDPEVMWFKDDNPVKESRHFQIDYDEEG------NCSLTISEVCGDDDAKYTCKAVNSL 121 (154)
T ss_dssp CCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEECTTC------EEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CcEEEeCCCeEEEEEEE-EEecCCEEEEEECCEECCCCCcEEEEECCCC------eEEEEECCCChhcCEEEEEEEEECC
Confidence 45788999999999998 8999999999999998863322222221221 2368899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|....
T Consensus 122 G~~~~ 126 (154)
T 1fhg_A 122 GEATC 126 (154)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 98754
No 457
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=2e-13 Score=86.72 Aligned_cols=83 Identities=18% Similarity=0.438 Sum_probs=65.4
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
+|.+...+....+.+|+.++|.|.+.+.|.+.+.|+|++..+.. .....|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL-----------PPSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSS-----------CCCSEEEEESCCTTTCEEEECEECC
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcC-----------CCCCEEEECCCCcccCEEEEEEEEe
Confidence 45566677778899999999999999988899999998876521 1246899999999999999999999
Q ss_pred CCcCeeEEEEEEEE
Q psy15128 116 VAGSTTVRAFLQVT 129 (292)
Q Consensus 116 ~~~~~~~~~~l~v~ 129 (292)
..+.......+.+.
T Consensus 79 ~~~~~~~s~~~~v~ 92 (96)
T 2ens_A 79 SSHGPQESRAVSIS 92 (96)
T ss_dssp SSCCCEECCCEEEE
T ss_pred CCCCcEEEEEEEEE
Confidence 66654444444444
No 458
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.42 E-value=7.7e-13 Score=82.60 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=48.7
Q ss_pred EEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEe
Q psy15128 47 KVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALS 115 (292)
Q Consensus 47 ~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~ 115 (292)
.+.+|+.+.|.|.+.+ |.+.+.|+|+|..+.. +.............|.|.+++.+|+|.|+|.|.|
T Consensus 17 ~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~--~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 17 HAITSECVMLACEVDR-EDAPVRWYKDGQEVEE--SDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp ECCTTCCEEEEEECSC-TTSCCEEEETTSCCCC--CSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred EEECCCcEEEEEEECC-CCcEEEEEECCEEeee--eeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 3467999999999865 7889999999987642 2222111112234799999999999999999854
No 459
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.42 E-value=6.1e-13 Score=101.91 Aligned_cols=119 Identities=21% Similarity=0.321 Sum_probs=77.6
Q ss_pred cccCCcCCCeeEEEEEEeccc-----ccccccEEEEEeC------CCcEEeC-CCccEEecCCcEEEEEEEeee-CC-Ce
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-----ERETKPALLTVHA------PPSFVVR-PQDQKVGLNGIASFQCVAEGS-PL-PS 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-----~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~ 67 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+... +....+.+|+.++|.|.+.+. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 789999999999999998421 1112236777764 4544433 333344578999999999986 43 69
Q ss_pred eEEEECCeEEeeccCC---------CcceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcCe
Q psy15128 68 VFWTQEGSQVLMFPGN---------AYGHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGST 120 (292)
Q Consensus 68 v~W~~~~~~~~~~~~~---------~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~~ 120 (292)
+.|++++..+...... ......+.....|.|.+....| .|.|+|.+.|.....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 9999998765311000 0011122334468888887764 678999999876543
No 460
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.42 E-value=4.8e-13 Score=100.00 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=74.1
Q ss_pred cccCCcCCCeeEEEEEEeccc----ccccccEEEEEeC------CCcEEe-CCCccEEecCCcEEEEEEEeee-CCC-ee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG----ERETKPALLTVHA------PPSFVV-RPQDQKVGLNGIASFQCVAEGS-PLP-SV 68 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~----~~~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~v 68 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+.. .+....+.+|+.++|.|.+.+. |.+ .+
T Consensus 76 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v 155 (238)
T 1bec_A 76 LELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVEL 155 (238)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEE
T ss_pred EecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEE
Confidence 789999999999999998632 1122236788865 455543 3444455679999999999986 654 89
Q ss_pred EEEECCeEEeeccCCC-c----ceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcC
Q psy15128 69 FWTQEGSQVLMFPGNA-Y----GHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGS 119 (292)
Q Consensus 69 ~W~~~~~~~~~~~~~~-~----~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~ 119 (292)
.|++++..+....... . ....+.....|.|......| .|.|+|.+.|....
T Consensus 156 ~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 156 SWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp EEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred EEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 9999998763211000 0 00011112234554444444 67899999987443
No 461
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.41 E-value=4.3e-13 Score=87.14 Aligned_cols=86 Identities=9% Similarity=0.063 Sum_probs=59.0
Q ss_pred CCcceEEeCCCceEEEeeCCCCCCC---CeEEEeEcCeEec-cCCCceEEecCCC-ccccccccccccccccccccceeE
Q psy15128 204 EPKDTRVASGETALLECGPPKGQPE---PTLHWKKNGQFID-LESSKRVSILGDP-WFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~g~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
.+....+.+|+.++|.|.+ .+.|. +.+.|+|++.... .....++.+.... .........|.|..+...|+|.|+
T Consensus 10 ~p~~~~v~~G~~v~L~C~~-~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (108)
T 3cx2_A 10 RPQDGEVTVGGSITFSARV-AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYR 88 (108)
T ss_dssp CCCCEEEETTCCEEEEEEE-ECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEE
T ss_pred CCCcEEEeCCCCEEEEEEE-CCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEE
Confidence 3567789999999999998 78888 9999999873221 1112223221100 000011346899999999999999
Q ss_pred EEEeeccccccc
Q psy15128 279 LIAKNIRNQQQH 290 (292)
Q Consensus 279 C~a~n~~g~~~~ 290 (292)
|.|.|..|.++.
T Consensus 89 C~a~N~~G~~~~ 100 (108)
T 3cx2_A 89 CEVSTKDKFDCS 100 (108)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEecCCCceEE
Confidence 999999998764
No 462
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.41 E-value=6.1e-12 Score=109.26 Aligned_cols=129 Identities=11% Similarity=0.145 Sum_probs=94.9
Q ss_pred CCeEEEEeEeccCCCCceEEEeCCeeCCCCC-ccEEEcC----CCcEEEEeeecCCCC---------------------C
Q psy15128 151 HSVAFLPCQAVGSPPPHIRWYKNGNSLPPED-TRINVSS----SGSLQIDVLRDDFRA---------------------E 204 (292)
Q Consensus 151 g~~v~l~C~~~~~p~~~~~W~~~~~~l~~~~-~~~~~~~----~~~l~i~~~~~~d~g---------------------~ 204 (292)
...+.|.|.+.|.|.|.+.|.++|..+.... ..+.+.. +..+.+..+...+.| .
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~ 170 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLR 170 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccccc
Confidence 4578999999999999999999998765422 2233332 224777778777777 2
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEE-Ee--EcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEE
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLH-WK--KNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIA 281 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~-W~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a 281 (292)
+....+.+|+.++|.|.+ .|.|.+.+. |+ ++|+.+... ....+... .....|.|..+...|.|.|+|.|
T Consensus 171 ~~~~~v~~G~~v~l~C~~-~g~P~p~i~~W~~~~~g~~l~~~--~~~~~~~~-----~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 171 IQNVEVNAGQFATFQCSA-IGRTVAGDRLWLQGIDVRDAPLK--EIKVTSSR-----RFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp CCCEEEETTSCEEEEEEE-ESCCCTTCEEEEEESSSCCEEEE--EEEECCSS-----EEEEEEEECSCCTTTCEEEEEEE
T ss_pred ccceEEeCCCcEEEEEEe-CCCCCCceeEEEecCCCcccccc--ceEEeccc-----cceEEEEEcccccccCeEEEEEE
Confidence 356788999999999998 899999887 87 678776421 11111111 11236889999999999999999
Q ss_pred eecccc
Q psy15128 282 KNIRNQ 287 (292)
Q Consensus 282 ~n~~g~ 287 (292)
.|..|.
T Consensus 243 ~n~~G~ 248 (731)
T 2v5y_A 243 RTEGGV 248 (731)
T ss_dssp EETTEE
T ss_pred ECCCCC
Confidence 999997
No 463
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.41 E-value=3.6e-11 Score=94.63 Aligned_cols=128 Identities=20% Similarity=0.241 Sum_probs=85.1
Q ss_pred CCCccEEecCCcEEEEEEEeeeC--------------CCeeEEEEC--Ce--EEeeccCC--------Cccee-------
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSP--------------LPSVFWTQE--GS--QVLMFPGN--------AYGHL------- 88 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~--------------~~~v~W~~~--~~--~~~~~~~~--------~~~~~------- 88 (292)
.+..+.+.+|++++|.|.+...+ ...+.||+. ++ .+...... ..++.
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 45567899999999999886432 246899974 22 22222111 11111
Q ss_pred -----EEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEEEeecCCCCCeEEeCCCCce-ecCCC-eEEEEeEec
Q psy15128 89 -----HVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQVTSVEDTPPPIVQVGPSNQT-LPLHS-VAFLPCQAV 161 (292)
Q Consensus 89 -----~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~-~~~g~-~v~l~C~~~ 161 (292)
....+..|+|.+++.+|.|.|+|.+.+..+.....+.+.|.. +|.+.+.+.... +..|+ .++|.|.+.
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~-----pP~V~v~p~~~~~~~~G~~~vtL~C~a~ 318 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK-----PPKVSLMPATLARAAPGEAPPELLCLVS 318 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB-----CCEEEEESSSCCCCCTTCCCCCEEEEEE
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc-----CCeEeeccCcceeecCCCccEEEEEEec
Confidence 112456899999999999999999998766555555666553 455555444433 45676 799999998
Q ss_pred cC-CC--CceEEE-eCC
Q psy15128 162 GS-PP--PHIRWY-KNG 174 (292)
Q Consensus 162 ~~-p~--~~~~W~-~~~ 174 (292)
+. |. +.+.|. +++
T Consensus 319 GfyP~~~~~VtW~~rdg 335 (401)
T 3f8u_B 319 HFYPSGGLEVEWELRGG 335 (401)
T ss_dssp EEBSSTTCEEEEEEESS
T ss_pred CCcCCCCcEEEEEecCC
Confidence 76 55 689995 765
No 464
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.5e-13 Score=89.40 Aligned_cols=86 Identities=16% Similarity=0.186 Sum_probs=59.8
Q ss_pred CCcceEEeCCCceEEEeeCCCC---CCCCeEEEeEcCe-EeccCCCceEEecCC-CccccccccccccccccccccceeE
Q psy15128 204 EPKDTRVASGETALLECGPPKG---QPEPTLHWKKNGQ-FIDLESSKRVSILGD-PWFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~---~p~~~~~W~~~g~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
.|....+.+|++++|.|.+ .+ .|.|.|.|+|++. .+....+.++.+... ..........|.|..+...|+|.|+
T Consensus 18 ~P~~v~V~eG~~v~L~C~v-~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 96 (118)
T 2edn_A 18 KPDSVSVETGKDAVVVAKV-NGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYR 96 (118)
T ss_dssp CCCCCEEETTSCEECCEEE-ETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEE
T ss_pred CCCCeEEeCCCCEEEEEEE-eccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEE
Confidence 4678889999999999998 55 4789999999752 222112233333211 0000011247999999999999999
Q ss_pred EEEeeccccccc
Q psy15128 279 LIAKNIRNQQQH 290 (292)
Q Consensus 279 C~a~n~~g~~~~ 290 (292)
|+|+|..|.++.
T Consensus 97 Cevsn~~g~~s~ 108 (118)
T 2edn_A 97 LEVKAKDTCDSC 108 (118)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEEcCCcEEE
Confidence 999999998754
No 465
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.41 E-value=2.2e-12 Score=109.10 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=81.7
Q ss_pred CcccCCcCCCeeEEEEEEecccccccccEEEEEeCCCcE-EeCCCccEEecCCcE-EEEEEEee-eCCCeeEEEECCeEE
Q psy15128 1 MITEVKKSDEGKYQCYVQNMVGERETKPALLTVHAPPSF-VVRPQDQKVGLNGIA-SFQCVAEG-SPLPSVFWTQEGSQV 77 (292)
Q Consensus 1 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~-~l~C~~~~-~~~~~v~W~~~~~~~ 77 (292)
.|.+++.+|+|.|+|.+.+..+......+.|.|..+|.. .+.+....+..++.. .|.|.+.+ .|.+.+.|++++..+
T Consensus 435 ~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l 514 (581)
T 3o3u_N 435 FLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPL 514 (581)
T ss_dssp EESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred EEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEEC
Confidence 378999999999999999988776344488999765432 223333345566555 66999988 599999999999876
Q ss_pred eeccCCCcc---------eeEEeeecEEEEccCC-CCCCeEEEEEEEeCCcC
Q psy15128 78 LMFPGNAYG---------HLHVTQEGTLRIQGVQ-KEDAGFFVCSALSVAGS 119 (292)
Q Consensus 78 ~~~~~~~~~---------~~~~~~~~~l~i~~~~-~~d~g~Y~C~~~~~~~~ 119 (292)
......... .......+.|.|.+++ .++.|.|+|.++|....
T Consensus 515 ~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 515 VPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp CTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 422111100 0011223479999998 55588999999987543
No 466
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=1.4e-12 Score=86.13 Aligned_cols=94 Identities=21% Similarity=0.277 Sum_probs=65.9
Q ss_pred EEEEeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE-----eeecEEEEccCCCC
Q psy15128 30 LLTVHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-----TQEGTLRIQGVQKE 104 (292)
Q Consensus 30 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~ 104 (292)
.|.|..+|.+....... ..+...|.|.+.|.|.+.+.|++++..+.... ...... ...+.|.|.++..+
T Consensus 2 ~L~V~~pP~i~~~~~~~---~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~ 75 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEPE---LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESK---IIHVEYYQEGEISEGCLLFNKPTHY 75 (118)
T ss_dssp --CCCCCCCCCCCCCCC---CCCEEEEEEEEECSSCCEEEEEETTEECCCSS---SEEEEEEECSSEEEEEEEEESCCGG
T ss_pred EEEEecCCceeccCCCe---eccceEEEEEeeeeCCCeEEEEECCEECCCCC---ceeEEEeccCccccEEEEECCCChh
Confidence 46677777755442221 23667899999999999999999998764211 111111 13558999999999
Q ss_pred CCeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 105 DAGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 105 d~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
|+|.|+|.|.|..|.....+.+.+.
T Consensus 76 d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 76 NNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp GCEEEEEEEEETTEEEEEEEEECCS
T ss_pred cCEEEEEEEECCCCeEeeEEEEEEc
Confidence 9999999999999887776666543
No 467
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.40 E-value=8e-13 Score=86.48 Aligned_cols=97 Identities=24% Similarity=0.382 Sum_probs=67.5
Q ss_pred EEeCCCcEEeCCCccEEecCCcEEEEEEEeee--CCCeeEEEECCeEEeeccCCCccee------EEeeecEEEEccCCC
Q psy15128 32 TVHAPPSFVVRPQDQKVGLNGIASFQCVAEGS--PLPSVFWTQEGSQVLMFPGNAYGHL------HVTQEGTLRIQGVQK 103 (292)
Q Consensus 32 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~------~~~~~~~l~i~~~~~ 103 (292)
....+|.+...+....+.+|+.++|.|.+.+. +.+.+.|++++..+.........+. .....+.|.|.+++.
T Consensus 6 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 6 DDFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp --CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccc
Confidence 33457788888888899999999999999865 3579999999876531110000000 111246899999999
Q ss_pred CCCeEEEEEEEeCCcCe-eEEEEEEE
Q psy15128 104 EDAGFFVCSALSVAGST-TVRAFLQV 128 (292)
Q Consensus 104 ~d~g~Y~C~~~~~~~~~-~~~~~l~v 128 (292)
+|+|.|+|.+.|..|.. ...+.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999987762 34444443
No 468
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.40 E-value=1.1e-12 Score=98.99 Aligned_cols=120 Identities=20% Similarity=0.282 Sum_probs=77.2
Q ss_pred cccCCcCCCeeEEEEEEeccc--ccccccEEEEEeC------CCcEEeC-CCccEEecCCcEEEEEEEeee-CC-CeeEE
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG--ERETKPALLTVHA------PPSFVVR-PQDQKVGLNGIASFQCVAEGS-PL-PSVFW 70 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~--~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~v~W 70 (292)
|.+++.+|+|.|+|.+.+... ......+.|.|.. +|.+... +....+.+|+.++|.|.+.+. |. +.+.|
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 159 (252)
T 1oga_E 80 VTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 159 (252)
T ss_dssp ECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred ECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEE
Confidence 789999999999999987521 1112225677753 4555443 333345578999999999985 65 48999
Q ss_pred EECCeEEeeccCCC---------cceeEEeeecEEEEccCCCC-CCeEEEEEEEeCCcCee
Q psy15128 71 TQEGSQVLMFPGNA---------YGHLHVTQEGTLRIQGVQKE-DAGFFVCSALSVAGSTT 121 (292)
Q Consensus 71 ~~~~~~~~~~~~~~---------~~~~~~~~~~~l~i~~~~~~-d~g~Y~C~~~~~~~~~~ 121 (292)
++++..+....... .....+...+.|.|...... +.|.|+|.+.|......
T Consensus 160 ~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 160 WVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp EETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 99988663211000 01112223346888777654 67899999998765443
No 469
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=2.2e-12 Score=83.04 Aligned_cols=85 Identities=22% Similarity=0.346 Sum_probs=64.5
Q ss_pred CCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeee---cEEEEccCCCCCCeEEEE
Q psy15128 35 APPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQE---GTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 35 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C 111 (292)
.+|.+...+....+.+|+.+.|.|.+.+ |.+.+.|++++..+.. ..+.....+ ..|.|.+++.+|+|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 80 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRK-----SQKYDVVCEGTMAMLVIRGASLKDAGEYTC 80 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCC-----SSSEEEEEETTEEEEEESSCCTTTCSEEEE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccC-----CCCEEEEECCCEEEEEECCCCcccCEEEEE
Confidence 3567777778889999999999999987 7779999999876631 112222222 379999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+.| ....+.|.|.
T Consensus 81 ~a~n----~~~~~~l~V~ 94 (103)
T 2edf_A 81 EVEA----SKSTASLHVE 94 (103)
T ss_dssp ECSS----CEEEEEEEEC
T ss_pred EEcc----CCcEEEEEEe
Confidence 9987 3455566654
No 470
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.39 E-value=1.1e-12 Score=86.21 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=59.8
Q ss_pred cCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEE-------eeecEEEEccCCCCCCeEEEEEEEeCCcCeeE
Q psy15128 50 LNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHV-------TQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 50 ~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~ 122 (292)
.+..+.|.|.+.|.|.|.|+|+|+|..+.... ....... ...+.|.|.+++..|+|.|+|.|.|..|....
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETS--FIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCS--SEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCC--ceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 56789999999999999999999998764211 1100100 12457999999999999999999999998777
Q ss_pred EEEEEEE
Q psy15128 123 RAFLQVT 129 (292)
Q Consensus 123 ~~~l~v~ 129 (292)
.+.+.+.
T Consensus 92 t~~l~v~ 98 (126)
T 1he7_A 92 SIMAAFM 98 (126)
T ss_dssp EEEECCC
T ss_pred EEEEEEE
Confidence 7766654
No 471
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.39 E-value=4.4e-12 Score=80.24 Aligned_cols=86 Identities=27% Similarity=0.393 Sum_probs=62.2
Q ss_pred CcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeC
Q psy15128 37 PSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSV 116 (292)
Q Consensus 37 p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~ 116 (292)
+.+...+....+.+|+.+.|.|.+ +.|.+.+.|++++..+.. ..............|.|.+++.+|+|.|+|.+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISA--SNKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECS--STTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCC--CCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 445556677889999999999999 778889999999987632 11111111112247999999999999999999
Q ss_pred CcCeeEEEEEEEE
Q psy15128 117 AGSTTVRAFLQVT 129 (292)
Q Consensus 117 ~~~~~~~~~l~v~ 129 (292)
+.....+.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 455555666553
No 472
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=6e-13 Score=87.53 Aligned_cols=96 Identities=18% Similarity=0.189 Sum_probs=70.9
Q ss_pred EEEEEeCCC-cEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCccee-EEeeecEEEEccCCCCCC
Q psy15128 29 ALLTVHAPP-SFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHL-HVTQEGTLRIQGVQKEDA 106 (292)
Q Consensus 29 ~~l~v~~~p-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~ 106 (292)
+.|.|..+| .+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+.... ..... .......|.|.+++.+|+
T Consensus 5 a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~--~~~~~~~~~~~~~L~I~~v~~~D~ 82 (115)
T 2cr6_A 5 SSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANE--LNEIDAQPGGYHVLTLRQLALKDS 82 (115)
T ss_dssp CCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSS--SCCBCCBTTTBCCBEECSCCTTTC
T ss_pred EEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCC--cEEEEEcCCCEEEEEEcCCChhhC
Confidence 556676655 56677788899999999999999998989999999998764221 11111 112234799999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEEe
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~~ 130 (292)
|.|+|.+ +.....+.|.|..
T Consensus 83 G~Y~C~~----g~~~~~~~L~V~~ 102 (115)
T 2cr6_A 83 GTIYFEA----GDQRASAALRVTE 102 (115)
T ss_dssp EEEEEEE----TTEECCEEEEEEC
T ss_pred EEEEEEE----CCeeEEEEEEEEC
Confidence 9999994 5556667777763
No 473
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.39 E-value=2.1e-12 Score=86.11 Aligned_cols=88 Identities=14% Similarity=0.214 Sum_probs=63.8
Q ss_pred CCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeecc---CCCcceeEEe----eecEEEEccCCCCCCeEEEEEEE
Q psy15128 42 RPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFP---GNAYGHLHVT----QEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 42 ~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~---~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
.+....+.+|++++|.|.+.+.|.+.+.|++.+..+.... .....+.... ....|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 3445678899999999999998889999998665432210 0111222221 24589999999999999999999
Q ss_pred eCCcCeeEEEEEEEEe
Q psy15128 115 SVAGSTTVRAFLQVTS 130 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~ 130 (292)
+. +.....+.|.|..
T Consensus 87 n~-g~~~~~~~l~V~~ 101 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLA 101 (124)
T ss_dssp SS-SEEEEEEEEEEEC
T ss_pred cC-CCCcEEEEEEEEe
Confidence 98 7667777777654
No 474
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.39 E-value=8.1e-12 Score=92.53 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=78.4
Q ss_pred CccEEecCCcEEEEEEEeee--CCCeeEEEECC--e---EEeec---------cCCCcceeEEeee-----cEEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S---QVLMF---------PGNAYGHLHVTQE-----GTLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~---~~~~~---------~~~~~~~~~~~~~-----~~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+. +...+.|+|.. . .+... ......++....+ ..|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (226)
T 3mlr_H 8 GGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQ 87 (226)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCC
T ss_pred CCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 35678899999999998653 34579999842 1 11100 1112234443322 359999999
Q ss_pred CCCCeEEEEEEEeCCc-------Ce--eEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceEEE
Q psy15128 103 KEDAGFFVCSALSVAG-------ST--TVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIRWY 171 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~-------~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~W~ 171 (292)
.+|+|.|.|.+.+..+ .. .....+.|... ...+|.+...+....+..|+.+.|.|.+.+. | .+.+.|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~-~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W- 165 (226)
T 3mlr_H 88 ASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSG-TTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 165 (226)
T ss_dssp GGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCC-CCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE-
T ss_pred cccCEEEEEeEccCCCcccccchhhhhCCccEEeeccC-CCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE-
Confidence 9999999999976421 00 11223444321 1223444432233335689999999999775 4 356899
Q ss_pred eCCeeC
Q psy15128 172 KNGNSL 177 (292)
Q Consensus 172 ~~~~~l 177 (292)
++..+
T Consensus 166 -~~~~~ 170 (226)
T 3mlr_H 166 -NSGAL 170 (226)
T ss_dssp -GGGTC
T ss_pred -CCccc
Confidence 44433
No 475
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=4.2e-13 Score=88.35 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=59.3
Q ss_pred CCcceEEeCCCceEEEeeCCCC---CCCCeEEEeEcCe-EeccCCCceEEecCCC-ccccccccccccccccccccceeE
Q psy15128 204 EPKDTRVASGETALLECGPPKG---QPEPTLHWKKNGQ-FIDLESSKRVSILGDP-WFDSRRSRSIFGSVLGALSDDQWK 278 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~---~p~~~~~W~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~~~g~y~ 278 (292)
.+....+.+|++++|.|.+ .+ .|.|.|.|+|++. ++......++.+.... .........|.|..+...|+|+|+
T Consensus 13 ~P~~v~V~eG~~v~L~C~v-~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~ 91 (126)
T 2dav_A 13 KPQGGTVKVGEDITFIAKV-KAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYR 91 (126)
T ss_dssp CCCCCEEETTCCEEEEEEE-ECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEE
T ss_pred cCCCeEEeCCCCEEEEEEE-eccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEE
Confidence 4677889999999999997 45 4899999999752 1111112333332110 000011246999999999999999
Q ss_pred EEEeeccccccc
Q psy15128 279 LIAKNIRNQQQH 290 (292)
Q Consensus 279 C~a~n~~g~~~~ 290 (292)
|+|.|..|.++.
T Consensus 92 Cevsn~~g~~~~ 103 (126)
T 2dav_A 92 CEVTYKDKFDSC 103 (126)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEeCCCcEEE
Confidence 999999988754
No 476
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.38 E-value=3.2e-12 Score=94.99 Aligned_cols=124 Identities=16% Similarity=0.259 Sum_probs=79.3
Q ss_pred cccCCcCCCeeEEEEEEeccc-------ccccccEEEEEe----CCCcEEeCCCccEEecCCcEEEEEEEeee-C-CCee
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-------ERETKPALLTVH----APPSFVVRPQDQKVGLNGIASFQCVAEGS-P-LPSV 68 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-------~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-~-~~~v 68 (292)
|.+++.+|+|.|.|.+.+..+ ......+.|.|. .+|.+...+....+..|+.++|.|.+.+. | ...+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v 162 (230)
T 3n9g_H 83 LSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 162 (230)
T ss_dssp ECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEE
T ss_pred ECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEE
Confidence 789999999999999987531 122233677775 24444433334445689999999999885 4 3468
Q ss_pred EEEECCeEEee----ccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeEEEEEEE
Q psy15128 69 FWTQEGSQVLM----FPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 69 ~W~~~~~~~~~----~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~~~~l~v 128 (292)
.| ++..+.. ..........+...+.|.|.....+| |.|+|.+.+..+.......+.+
T Consensus 163 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v 223 (230)
T 3n9g_H 163 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 223 (230)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccC
Confidence 99 4433210 00000011122334579999999999 9999999998776655555443
No 477
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.38 E-value=8.6e-13 Score=99.58 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=76.2
Q ss_pred cccCCcCCCeeEEEEEEeccc-----ccccccEEEEEeC------CCcEEeC-CCccEEecCCcEEEEEEEee-eCCC-e
Q psy15128 2 ITEVKKSDEGKYQCYVQNMVG-----ERETKPALLTVHA------PPSFVVR-PQDQKVGLNGIASFQCVAEG-SPLP-S 67 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~~~-----~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~ 67 (292)
|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+... +....+..|+.++|.|.+.+ .|.+ .
T Consensus 78 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~ 157 (253)
T 3to4_D 78 LQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 157 (253)
T ss_dssp EEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEE
Confidence 789999999999999986543 1122225777753 4444332 22223345789999999998 5666 8
Q ss_pred eEEEECCeEEeeccCCCc---------ceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcC
Q psy15128 68 VFWTQEGSQVLMFPGNAY---------GHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGS 119 (292)
Q Consensus 68 v~W~~~~~~~~~~~~~~~---------~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~ 119 (292)
+.|++++..+........ ....+...+.|.|.....+| .|.|+|.+.+....
T Consensus 158 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 158 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp EEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 999999887632110000 11122334578888888777 77999999986543
No 478
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4.4e-13 Score=85.99 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=57.4
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCc--eEEecCCCccccccccccccccccccccceeEEEEee
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSK--RVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKN 283 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n 283 (292)
....+.+|+.+.|.|.+ .+.| +.+.|+++|+.+...... ++.+..++ ....|.|..+..+|+|.|+|.|.|
T Consensus 16 ~~~~v~~G~~v~l~C~~-~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 16 EDQQVFVGDRVEMAVEV-SEEG-AQVMWMKNGVELTREDSFKARYRFKKDG-----KRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp CCEEEESSCCCBCCEEE-SCSS-CCCEEEESSCBCCCSCCSSCCCEEEECS-----SEEEEECSSCCGGGCSBEEEECSS
T ss_pred CceEEcCCCCEEEEEEE-eCCC-CEEEEEECCEECCCCCCcceeEEEEECC-----CEEEEEECCCChhhCEEEEEEEcC
Confidence 46788999999999998 7777 899999999988644322 33333332 123688999999999999999999
Q ss_pred cccc
Q psy15128 284 IRNQ 287 (292)
Q Consensus 284 ~~g~ 287 (292)
....
T Consensus 89 ~~~~ 92 (101)
T 2edk_A 89 GQCE 92 (101)
T ss_dssp CEEC
T ss_pred CcEE
Confidence 5443
No 479
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.38 E-value=1.3e-12 Score=78.66 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=51.4
Q ss_pred CCCCCcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccc-cccccceeEE
Q psy15128 201 FRAEPKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVL-GALSDDQWKL 279 (292)
Q Consensus 201 d~g~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~~~g~y~C 279 (292)
|.+.++...+..|++++|+|.+ .+.|+ |+|+|+|.+|... . ...|.|..+ ..+|+|.|+|
T Consensus 2 ~~~~p~~~v~~~G~~v~L~C~~-~g~P~--i~W~kdg~~l~~~--------~--------~~~L~I~~v~~~~DsG~Y~C 62 (82)
T 3r08_E 2 DAENIEYKVSISGTSVELTCPL-DSDEN--LKWEKNGQELPQK--------H--------DKHLVLQDFSEVEDSGYYVC 62 (82)
T ss_dssp CCCCCCCEEEEETTEEEEECSS-CCCSS--CEEEETTEECTTC--------C--------SSCCBCCSCCTTTTCSCEEE
T ss_pred CCCCCceeEEEcCCeEEEEEEC-CCCCc--EEEEECCEECcCC--------C--------CCEEEECccCccCcCEEEEE
Confidence 4556677788899999999998 78874 9999999988522 1 125888885 7799999999
Q ss_pred EEee
Q psy15128 280 IAKN 283 (292)
Q Consensus 280 ~a~n 283 (292)
.|.+
T Consensus 63 ~A~t 66 (82)
T 3r08_E 63 YTPA 66 (82)
T ss_dssp ECSS
T ss_pred EEcc
Confidence 9976
No 480
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.38 E-value=2.9e-12 Score=87.09 Aligned_cols=88 Identities=26% Similarity=0.450 Sum_probs=65.2
Q ss_pred EeCCCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeec-----cCCCcceeEE------eeecEEEEccC
Q psy15128 33 VHAPPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMF-----PGNAYGHLHV------TQEGTLRIQGV 101 (292)
Q Consensus 33 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~-----~~~~~~~~~~------~~~~~l~i~~~ 101 (292)
...+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+... .+....+... ...+.|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 346888999999999999999999999999999999999976533110 0000111111 13568999999
Q ss_pred CCCCCeEEEEEEEeCCcCe
Q psy15128 102 QKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 102 ~~~d~g~Y~C~~~~~~~~~ 120 (292)
+.+|+|.|+|.+.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999988765
No 481
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2e-12 Score=83.38 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=62.4
Q ss_pred CCcEEeCCCc---cEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQD---QKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+.. ..+.+|+.++|.|.+.+.|.+ +.|++++..+... .............|.|.+++.+|+|.|+|.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 83 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES--ELLVVKMDGRKHRLILPEAKVQDSGEFECR 83 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB--TTBEEEEETTEEEEEESSCCTTTCEEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC--CCEEEEeCCCEEEEEECCCChhhCEEEEEE
Confidence 4555556655 678999999999999998888 9999999876321 111111111234799999999999999999
Q ss_pred EEeCCcCeeEEEEEEEE
Q psy15128 113 ALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~ 129 (292)
+.|..+ .+.|.|.
T Consensus 84 a~n~~~----~~~l~V~ 96 (104)
T 2e6p_A 84 TEGVSA----FFGVTVQ 96 (104)
T ss_dssp CSSCCC----CEEEEEE
T ss_pred ECCceE----EEEEEEc
Confidence 987633 4455554
No 482
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=5.2e-13 Score=85.65 Aligned_cols=89 Identities=19% Similarity=0.199 Sum_probs=63.8
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCC--CcceeEEeeecEEEEccCCCCCCeEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGN--AYGHLHVTQEGTLRIQGVQKEDAGFFVCSA 113 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~ 113 (292)
+|.+...+....+.+|+.+.|.|.+.+.| +.+.|++++..+...... .+..........|.|.++..+|+|.|+|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEEC
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEE
Confidence 56677777788899999999999999888 899999999876422211 111111112247999999999999999998
Q ss_pred EeCCcCeeEEEEEEEE
Q psy15128 114 LSVAGSTTVRAFLQVT 129 (292)
Q Consensus 114 ~~~~~~~~~~~~l~v~ 129 (292)
.| ....+.|.|.
T Consensus 87 ~n----~~~~~~l~V~ 98 (101)
T 2edk_A 87 NG----GQCEAELIVE 98 (101)
T ss_dssp SS----CEECCBEEEE
T ss_pred cC----CcEEEEEEEe
Confidence 76 3344555554
No 483
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.38 E-value=1.5e-11 Score=92.89 Aligned_cols=131 Identities=20% Similarity=0.319 Sum_probs=76.9
Q ss_pred CccEEecCCcEEEEEEEeee--CCCeeEEEECC--e---EEeec---------cCCCcceeEEeee-----cEEEEccCC
Q psy15128 44 QDQKVGLNGIASFQCVAEGS--PLPSVFWTQEG--S---QVLMF---------PGNAYGHLHVTQE-----GTLRIQGVQ 102 (292)
Q Consensus 44 ~~~~~~~g~~~~l~C~~~~~--~~~~v~W~~~~--~---~~~~~---------~~~~~~~~~~~~~-----~~l~i~~~~ 102 (292)
....+.+|++++|.|.+.+. ....+.|+|.. . .+... ......+.....+ ..|+|.+++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 45678899999999999753 34579999842 1 11110 1112234443322 259999999
Q ss_pred CCCCeEEEEEEEeCCc---------C--eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-C-CCceE
Q psy15128 103 KEDAGFFVCSALSVAG---------S--TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-P-PPHIR 169 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~---------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p-~~~~~ 169 (292)
.+|+|.|.|.+.+..+ . ......+.|... ...+|.+...+....+.+|+.++|.|.+.+. | ++.+.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~ 189 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSA-STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 189 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSS-CCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEE
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEecC-CCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEE
Confidence 9999999999986421 1 112234555322 2233444433333346789999999999774 4 34689
Q ss_pred EEeCCeeC
Q psy15128 170 WYKNGNSL 177 (292)
Q Consensus 170 W~~~~~~l 177 (292)
| ++..+
T Consensus 190 W--~~~~~ 195 (256)
T 3sob_H 190 W--NSGAL 195 (256)
T ss_dssp E--GGGTB
T ss_pred E--CCccc
Confidence 9 55544
No 484
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.37 E-value=5.9e-11 Score=87.81 Aligned_cols=149 Identities=16% Similarity=0.193 Sum_probs=89.0
Q ss_pred EEeCCCccEEecCCcEEEEEEEeeeC--CCeeEEEECC--e--EEeecc-----CCCcceeEEee-----ecEEEEccCC
Q psy15128 39 FVVRPQDQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--S--QVLMFP-----GNAYGHLHVTQ-----EGTLRIQGVQ 102 (292)
Q Consensus 39 ~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~--~~~~~~-----~~~~~~~~~~~-----~~~l~i~~~~ 102 (292)
+...+..+.+.+|++++|.|.+.+.+ ...+.|+|.. . ...... .....++.... ...|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 34456677899999999999997543 3579999852 1 111111 11123444432 2379999999
Q ss_pred CCCCeEEEEEEEeCCc------C--eeEEEEEEEEeec-CCCCCeEEeCCCCceecCCCeEEEEeEeccC-CCC-ceEEE
Q psy15128 103 KEDAGFFVCSALSVAG------S--TTVRAFLQVTSVE-DTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PPP-HIRWY 171 (292)
Q Consensus 103 ~~d~g~Y~C~~~~~~~------~--~~~~~~l~v~~~~-~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~-~~~W~ 171 (292)
.+|+|.|.|.+.+... . ......|.|.... ...+|.+.+ .. ..++|.|.+.+. |.+ .+.|+
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~-------~~-~~~~L~C~~~g~~P~~i~v~W~ 155 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFV-------MK-NGTNVACLVKEFYPKDIRINLV 155 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEE-------EE-ETTEEEEEEESCBSSCCEEEEE
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEE-------cC-CCCeEEEEEEEEeCCCEEEEEe
Confidence 9999999999986521 1 1122355554211 111233222 11 124899999876 544 79999
Q ss_pred eCCeeCCCCCccEEEcCCCcEEEEe
Q psy15128 172 KNGNSLPPEDTRINVSSSGSLQIDV 196 (292)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~l~i~~ 196 (292)
++ .++...........++++.+..
T Consensus 156 ~~-~~~~~~~~~~~~~~dg~y~~~~ 179 (229)
T 1hxm_A 156 SS-KKITEFDPAIVISPSGKYNAVK 179 (229)
T ss_dssp CS-SEEEECCCEEEECTTSSEEEEE
T ss_pred cC-CEEecCccceEECCCCcEEEEE
Confidence 99 7665433333445667777763
No 485
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.37 E-value=3.1e-12 Score=96.89 Aligned_cols=130 Identities=20% Similarity=0.301 Sum_probs=75.4
Q ss_pred ccEEecCCcEEEEEEEeeeC--CCeeEEEECC--e---EEeeccC--------CCcceeEEeee-----cEEEEccCCCC
Q psy15128 45 DQKVGLNGIASFQCVAEGSP--LPSVFWTQEG--S---QVLMFPG--------NAYGHLHVTQE-----GTLRIQGVQKE 104 (292)
Q Consensus 45 ~~~~~~g~~~~l~C~~~~~~--~~~v~W~~~~--~---~~~~~~~--------~~~~~~~~~~~-----~~l~i~~~~~~ 104 (292)
...+.+|++++|.|.+.+.+ ...+.|+|.. . .+..... ....++....+ ..|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 56788999999999997532 4579999742 1 1111111 11234443322 25999999999
Q ss_pred CCeEEEEEEEeCCc------C--eeEEEEEEEEeecCCCCCeEEeCCCCceecCCCeEEEEeEeccC-CC-CceEEEeCC
Q psy15128 105 DAGFFVCSALSVAG------S--TTVRAFLQVTSVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGS-PP-PHIRWYKNG 174 (292)
Q Consensus 105 d~g~Y~C~~~~~~~------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~~W~~~~ 174 (292)
|+|.|.|.+.+... . ......|.|... ...+|.+........+..|+.++|.|.+.+. |. +.+.| ++
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~-~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~ 165 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAA-STKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--NS 165 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSS-CCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--GG
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecc-cCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--CC
Confidence 99999999986531 0 111234444322 1223444432333335689999999999775 42 57999 54
Q ss_pred eeC
Q psy15128 175 NSL 177 (292)
Q Consensus 175 ~~l 177 (292)
..+
T Consensus 166 ~~~ 168 (263)
T 3iu4_H 166 GAL 168 (263)
T ss_dssp GTB
T ss_pred ccc
Confidence 443
No 486
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=6.7e-12 Score=80.67 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=61.4
Q ss_pred CCCcEEeCCCc-cEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeec---EEEEccCCCCCCeEEE
Q psy15128 35 APPSFVVRPQD-QKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG---TLRIQGVQKEDAGFFV 110 (292)
Q Consensus 35 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~Y~ 110 (292)
.+|.+...+.. ..+.+|+.+.|.|.+ +.|.+.+.|++++..+... ..+.....++ .|.|.+++.+|+|.|+
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMS----GSKYIFESIGAKRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCC----SSSSEEEEETTEEEEEECSCSSSSCEEEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCC----CCeEEEEecCCEEEEEECCCCcccCEEEE
Confidence 34556555555 779999999999999 6788899999999876421 0122333333 8999999999999999
Q ss_pred EEEEeCCcCeeEEEEEEE
Q psy15128 111 CSALSVAGSTTVRAFLQV 128 (292)
Q Consensus 111 C~~~~~~~~~~~~~~l~v 128 (292)
|.+ +.....+.|.|
T Consensus 89 C~a----~~~~~~~~l~V 102 (104)
T 1pd6_A 89 CVV----GGEKCSTELFV 102 (104)
T ss_dssp EEE----TTEEECCEEEE
T ss_pred EEE----CCCcEEEEEEE
Confidence 999 33344445544
No 487
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=2.7e-12 Score=82.62 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=63.9
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCC-CeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPL-PSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSAL 114 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~ 114 (292)
++.+...+....+.+|+.++|.|.+.+.|. +.+.|+|++..+.. ..............|.|.+++.+|+|.|+|.+.
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~--~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGS--SSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSB--CSSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCC--CCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 345666677889999999999999988764 47999999987632 111111111123479999999999999999883
Q ss_pred eCCcCeeEEEEEEEEe
Q psy15128 115 SVAGSTTVRAFLQVTS 130 (292)
Q Consensus 115 ~~~~~~~~~~~l~v~~ 130 (292)
.....+.|.|..
T Consensus 86 ----~~~~~a~L~V~~ 97 (104)
T 2eny_A 86 ----GLTSKASLIVRE 97 (104)
T ss_dssp ----TEEEEECEEEEC
T ss_pred ----CeeEEEEEEEeC
Confidence 445667777764
No 488
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.37 E-value=1.1e-12 Score=83.59 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=56.1
Q ss_pred cceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeecc
Q psy15128 206 KDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIR 285 (292)
Q Consensus 206 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~ 285 (292)
....+.+|+.+.|.|.+..+.|.+.+.|++++.... .. .... ....|.|..+...|+|.|+|.|.|..
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~--~~-~~~~---------~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKL--PS-RAMD---------FNGILTIRNVQPSDAGTYVCTGSNMF 85 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCC--CT-TEEE---------ETTEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCC--Cc-eeec---------CCCEEEEeCCChhhCEEEEEEecCCC
Confidence 566889999999999983378999999999754332 11 1111 11268899999999999999999999
Q ss_pred ccccc
Q psy15128 286 NQQQH 290 (292)
Q Consensus 286 g~~~~ 290 (292)
|..+.
T Consensus 86 g~~~~ 90 (98)
T 1gl4_B 86 AMDQG 90 (98)
T ss_dssp CEEEE
T ss_pred Ccccc
Confidence 98754
No 489
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=9.5e-13 Score=84.75 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=57.4
Q ss_pred CCcceEEeCCCceEEEeeCCCCCCC-CeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEe
Q psy15128 204 EPKDTRVASGETALLECGPPKGQPE-PTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAK 282 (292)
Q Consensus 204 ~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~ 282 (292)
.+.+..+.+|+.++|.|.+ .+.|. +.+.|+|+|+++..+. ++.+..++ ....|.|..+..+|+|.|+|.|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~v-~~~~~~~~v~W~k~g~~i~~~~--r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 14 RLKTMEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSS--RFQATRQG-----RKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCEEEESSCCEEEEEEC-SSCCCSSCBCCBSSSSBCSBCS--SCEEEEET-----TEEEEEECSCCTTTCSCEEEEET
T ss_pred cCCCcEEcCCCcEEEEEEE-cCCCCCceeEEEECCEECCCCC--CEEEEEcC-----CEEEEEECCCCHHHCEEEEEEEC
Confidence 3467789999999999998 66664 5899999999886433 33333222 12368999999999999999998
Q ss_pred ecccc
Q psy15128 283 NIRNQ 287 (292)
Q Consensus 283 n~~g~ 287 (292)
|...+
T Consensus 86 ~~~~~ 90 (104)
T 2eny_A 86 GLTSK 90 (104)
T ss_dssp TEEEE
T ss_pred CeeEE
Confidence 86544
No 490
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=1e-12 Score=86.81 Aligned_cols=73 Identities=23% Similarity=0.294 Sum_probs=55.4
Q ss_pred CceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeeccccccc
Q psy15128 214 ETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNIRNQQQH 290 (292)
Q Consensus 214 ~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~~g~~~~ 290 (292)
+...|.|.+ .|.|.+.+.|+++|+.+......++.....+. .....|.|..+...|+|.|+|.|+|..|.++.
T Consensus 21 ~~~~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 93 (118)
T 1wwc_A 21 LEHCIEFVV-RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGE---ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQ 93 (118)
T ss_dssp CEEEEEEEE-ECSSCCEEEEEETTEECCCSSSEEEEEEECSS---EEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cceEEEEEe-eeeCCCeEEEEECCEECCCCCceeEEEeccCc---cccEEEEECCCChhcCEEEEEEEECCCCeEee
Confidence 567899998 89999999999999998644333333322211 12236889999999999999999999998764
No 491
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.37 E-value=9.5e-12 Score=91.10 Aligned_cols=130 Identities=18% Similarity=0.242 Sum_probs=83.3
Q ss_pred EEeCCCCceecCCCeEEEEeEec-cCC---CCceEEEeCCeeCCCCCccEEE-----cCCCcEEEEeeecCCCC------
Q psy15128 139 VQVGPSNQTLPLHSVAFLPCQAV-GSP---PPHIRWYKNGNSLPPEDTRINV-----SSSGSLQIDVLRDDFRA------ 203 (292)
Q Consensus 139 ~~~~~~~~~~~~g~~v~l~C~~~-~~p---~~~~~W~~~~~~l~~~~~~~~~-----~~~~~l~i~~~~~~d~g------ 203 (292)
+.+.|....+..|+.++|.|.+. +.| +..+.|+|++.++......+.+ ...|.+++.-.......
T Consensus 5 Vs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~V 84 (304)
T 3shs_A 5 VSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEV 84 (304)
T ss_dssp EEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCC
T ss_pred EEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCcceEEeeeccccCCeEEEEEEEECCCCeeeeeeE
Confidence 44556777789999999999984 546 4479999999887653332222 12233333211100000
Q ss_pred -------------CCcceEEeCCCceEEEeeC--CCCCC-----CCeEEEeEcCeEeccCCCceEEecCCCccccccccc
Q psy15128 204 -------------EPKDTRVASGETALLECGP--PKGQP-----EPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRS 263 (292)
Q Consensus 204 -------------~~~~~~~~~g~~~~l~C~~--~~~~p-----~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (292)
.+....+..|..+.|.+.+ ..|.| ...++|++++..+.. .. .
T Consensus 85 tVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg---Aq---------------~ 146 (304)
T 3shs_A 85 FLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT---TQ---------------D 146 (304)
T ss_dssp EEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES---SS---------------E
T ss_pred EEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC---cc---------------c
Confidence 1233344567888998876 56666 469999999987731 10 2
Q ss_pred cccccccccccceeEEEEeeccc
Q psy15128 264 IFGSVLGALSDDQWKLIAKNIRN 286 (292)
Q Consensus 264 l~i~~~~~~~~g~y~C~a~n~~g 286 (292)
|.+......++|.|+|.++|..|
T Consensus 147 lT~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 147 ITIQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp EEECSCCGGGCEEEEEEEESSSG
T ss_pred cceeeEEecCCeEEEEEEEcCCC
Confidence 34455667799999999999977
No 492
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=1.5e-12 Score=84.29 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=56.0
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.+.|.|.+ .+.|.+ +.|+++|+.+.... ++.+..++ ....|.|..+..+|+|.|+|.|.|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~~~~~-v~W~k~g~~~~~~~--~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 15 IADLTVKAAEQAVFKCEV-SDEKVT-GKWYKNGVEVRPSK--RITISHVG-----RFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCEEEESSCCEECCCEE-SCSSCE-EEEEESSCBCCCCS--SCEEEEET-----TEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCeEEeCCCeEEEEEEE-cCCCcc-eEEEcCCEECcCCC--CEEEEEeC-----CEEEEEECCCCcCCCEEEEEEEccC
Confidence 356789999999999998 677777 99999999886333 33332222 1236889999999999999999998
Q ss_pred c
Q psy15128 285 R 285 (292)
Q Consensus 285 ~ 285 (292)
.
T Consensus 86 ~ 86 (106)
T 2dlt_A 86 A 86 (106)
T ss_dssp C
T ss_pred C
Confidence 3
No 493
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=1.4e-12 Score=83.90 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=56.1
Q ss_pred CcceEEeCCCceEEEeeCCCCCCCCeEEEeEcCeEeccCCCceEEecCCCccccccccccccccccccccceeEEEEeec
Q psy15128 205 PKDTRVASGETALLECGPPKGQPEPTLHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSDDQWKLIAKNI 284 (292)
Q Consensus 205 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~a~n~ 284 (292)
+....+.+|+.++|.|.+ .+ |.+.+.|+++|+.+......++.+..++ ....|.|..+...|+|.|+|.|.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~~-~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a~n~ 86 (103)
T 1x44_A 14 LEDTTAYCGERVELECEV-SE-DDANVKWFKNGEEIIPGPKSRYRIRVEG-----KKHILIIEGATKADAAEYSVMTTGG 86 (103)
T ss_dssp CCCEEEETTEEEEEEEEC-SS-SSCCCEEEETTEECCCSTTCSEEEEEET-----TEEEEEEEEECTTTCSEEEEEETTE
T ss_pred CCCEEEECCCCEEEEEEe-cC-CCCeEEEEECCEECCCCCceEEEEEEcC-----CEEEEEECCCCcccCEEEEEEECCC
Confidence 456788999999999998 66 6689999999999864432233333222 1236889999999999999999994
No 494
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.7e-12 Score=82.87 Aligned_cols=80 Identities=20% Similarity=0.351 Sum_probs=60.7
Q ss_pred CCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCeeE
Q psy15128 43 PQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGSTTV 122 (292)
Q Consensus 43 ~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~~~ 122 (292)
+....+.+|+.++|.|.+.+.| +.+.|+|++..+.. ..+.... ...|.|.+++.+|+|.|+|.+.|..+....
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~-----~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 82 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAE-----SNRTRIT-GEEVEVQDSVPADSGLYACVTSSPSGSDTT 82 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCC-----CSSEEEC-SSEEEETTCCTTTCEEEEEEEEETTEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCC-----CCcEEEE-CCEEEEccCCHHHCEEEEEEEEeCCceEEE
Confidence 3455678899999999998876 69999999876531 1122222 568999999999999999999998887655
Q ss_pred EEEEEEE
Q psy15128 123 RAFLQVT 129 (292)
Q Consensus 123 ~~~l~v~ 129 (292)
.+.|.|.
T Consensus 83 ~~~l~V~ 89 (99)
T 2cr3_A 83 YFSVNVS 89 (99)
T ss_dssp EEEECBC
T ss_pred EEEEEEe
Confidence 5555443
No 495
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=8.1e-12 Score=80.33 Aligned_cols=85 Identities=27% Similarity=0.459 Sum_probs=64.5
Q ss_pred CCcEEeCCCccEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeec---EEEEccCCCCCCeEEEEE
Q psy15128 36 PPSFVVRPQDQKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEG---TLRIQGVQKEDAGFFVCS 112 (292)
Q Consensus 36 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~g~Y~C~ 112 (292)
+|.+...+....+.+|+.++|.|.+ +.|.+.+.|++++..+.. ..+.....++ .|.|.+++.+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRA-----SGKHQPSQEGLTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCS-----SSSEEEEEETTEEEEEEESCCTTTCSEEEEE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCC-----CCeEEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 5666667778899999999999995 778889999999976531 1233333333 899999999999999998
Q ss_pred EEeCCcCeeEEEEEEEEe
Q psy15128 113 ALSVAGSTTVRAFLQVTS 130 (292)
Q Consensus 113 ~~~~~~~~~~~~~l~v~~ 130 (292)
.+.....+.|.|..
T Consensus 82 ----~g~~~~~~~l~V~~ 95 (103)
T 2dku_A 82 ----IGQAQSRAQLLVQG 95 (103)
T ss_dssp ----CSSCBCCEEEEEEC
T ss_pred ----eCCceEEEEEEEeC
Confidence 35555566677654
No 496
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.35 E-value=2.9e-12 Score=95.24 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=73.8
Q ss_pred cccCCcCCCeeEEEEEEec---ccccccccEEEEEeC---------CCcEEe-CCCccEEecCCcEEEEEEEeee-CC-C
Q psy15128 2 ITEVKKSDEGKYQCYVQNM---VGERETKPALLTVHA---------PPSFVV-RPQDQKVGLNGIASFQCVAEGS-PL-P 66 (292)
Q Consensus 2 i~~v~~~D~G~Y~C~~~~~---~~~~~~~~~~l~v~~---------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~-~ 66 (292)
|.+++.+|+|.|.|.+.+. ........+.|.|.. +|...+ .+....+..|+.++|.|.+.+. |. +
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 83 IYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp ECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred ECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCe
Confidence 7899999999999999874 111222336788862 233222 2333344568899999999886 65 5
Q ss_pred eeEEEE-CCeEEeecc-CCC-cceeEEeeecEEEEccCCCCCCeEEEEEEEeCCcCe
Q psy15128 67 SVFWTQ-EGSQVLMFP-GNA-YGHLHVTQEGTLRIQGVQKEDAGFFVCSALSVAGST 120 (292)
Q Consensus 67 ~v~W~~-~~~~~~~~~-~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~~~~~~~ 120 (292)
.+.|++ ++..+.... ... .........+.|.|.+... + |.|+|.+.|.....
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred EEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 899999 665442110 000 0001122234688888776 4 99999999876643
No 497
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=9.9e-12 Score=81.38 Aligned_cols=87 Identities=23% Similarity=0.320 Sum_probs=62.4
Q ss_pred EeCCCcEEeCCCc---cEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCC
Q psy15128 33 VHAPPSFVVRPQD---QKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDA 106 (292)
Q Consensus 33 v~~~p~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~ 106 (292)
|..+|.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|+|++..+... .+..... ...|.|.+++.+|+
T Consensus 7 v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~-----~~~~~~~~~~~~~L~I~~v~~~D~ 80 (113)
T 2cpc_A 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES-----PALLLQKEDTVRRLVLPAVQLEDS 80 (113)
T ss_dssp CCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCB-----TTBEEEECSSEEEEEESSCCTTTC
T ss_pred cccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccC-----CCEEEEECCCEEEEEECCCCcccC
Confidence 3445555554444 5678899999999995 788899999999876321 1222222 25899999999999
Q ss_pred eEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 107 GFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 107 g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
|.|+|.+.| ....+.|.|.
T Consensus 81 G~Y~C~a~n----~~~~~~l~V~ 99 (113)
T 2cpc_A 81 GEYLCEIDD----ESASFTVTVT 99 (113)
T ss_dssp EEEEEESSS----CEEEEEEEEE
T ss_pred EEEEEEEec----CcEEEEEEEe
Confidence 999999977 3445566665
No 498
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.34 E-value=1e-11 Score=79.35 Aligned_cols=84 Identities=19% Similarity=0.218 Sum_probs=63.2
Q ss_pred CCcEEeCCCc-cEEecCCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEee---ecEEEEccCCCCCCeEEEE
Q psy15128 36 PPSFVVRPQD-QKVGLNGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQ---EGTLRIQGVQKEDAGFFVC 111 (292)
Q Consensus 36 ~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~Y~C 111 (292)
+|.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++..+... .+..... ...|.|.+++.+|+|.|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~-----~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS-----TKYIFEHKGCQRILFINNCQMTDDSEYYV 80 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB-----TTEEEEEETTEEEEEEEEECTTTCCEEEE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC-----CCEEEEecCCEEEEEEcCCCcCcCEEEEE
Confidence 5677766665 5788999999999998 688899999999766321 1222222 2379999999999999999
Q ss_pred EEEeCCcCeeEEEEEEEE
Q psy15128 112 SALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 112 ~~~~~~~~~~~~~~l~v~ 129 (292)
.+ +.....+.|.|.
T Consensus 81 ~a----g~~~~~~~l~V~ 94 (100)
T 2yuv_A 81 TA----GDEKCSTELFVR 94 (100)
T ss_dssp EE----TTEEEEEEEEEC
T ss_pred EE----CCceEEEEEEEe
Confidence 99 555666666665
No 499
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.34 E-value=1e-10 Score=101.65 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=91.7
Q ss_pred CCcEEEEEEEeeeCCCeeEEEECCeEEeeccCCCcceeEEeeecEEEEccCCCCC-CeEEEEEEEeCCcCeeEEEEEEEE
Q psy15128 51 NGIASFQCVAEGSPLPSVFWTQEGSQVLMFPGNAYGHLHVTQEGTLRIQGVQKED-AGFFVCSALSVAGSTTVRAFLQVT 129 (292)
Q Consensus 51 g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~~~~~~~~~~~~~~l~v~ 129 (292)
.+.+.|.|.+.|.|.+.+.|.++|..+. . .....+.|..+...+ .+.|.|.+.+..|..... .+.+.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~-----~------~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~ 158 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTR-----T------WNRAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVL 158 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCS-----S------CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEE
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCC-----c------eeEEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEee
Confidence 3578999999999999999999987541 0 112345555543333 478888776665543322 22222
Q ss_pred eecCCCCCeEEeCCCCceecCCCeEEEEeEeccCCCCceE-EE--eCCeeCCCCCccEEEcC---CCcEEEEeeecCCCC
Q psy15128 130 SVEDTPPPIVQVGPSNQTLPLHSVAFLPCQAVGSPPPHIR-WY--KNGNSLPPEDTRINVSS---SGSLQIDVLRDDFRA 203 (292)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~~-W~--~~~~~l~~~~~~~~~~~---~~~l~i~~~~~~d~g 203 (292)
......+|.+. .+....+..|+.++|.|.+.+.|.|.+. |+ ++|..+.... ...+.. .+.|.|.++...|.|
T Consensus 159 ~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~-~~~~~~~~~~~~l~I~~~~~~d~g 236 (731)
T 2v5y_A 159 GHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE-IKVTSSRRFIASFNVVNTTKRDAG 236 (731)
T ss_dssp SSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE-EEECCSSEEEEEEEECSCCTTTCE
T ss_pred ecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc-eEEeccccceEEEEEcccccccCe
Confidence 21122344444 5567788999999999999999999987 88 6777664321 111111 247899999999988
Q ss_pred CC
Q psy15128 204 EP 205 (292)
Q Consensus 204 ~~ 205 (292)
.|
T Consensus 237 ~Y 238 (731)
T 2v5y_A 237 KY 238 (731)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 500
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.34 E-value=1.4e-13 Score=91.63 Aligned_cols=82 Identities=13% Similarity=0.164 Sum_probs=60.3
Q ss_pred ceEEeCCCceEEEeeCCCCCCCCe-EEEeEcCeEeccCCCceEEecCCCcccccccccccccccccccc-ceeEEEEeec
Q psy15128 207 DTRVASGETALLECGPPKGQPEPT-LHWKKNGQFIDLESSKRVSILGDPWFDSRRSRSIFGSVLGALSD-DQWKLIAKNI 284 (292)
Q Consensus 207 ~~~~~~g~~~~l~C~~~~~~p~~~-~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~-g~y~C~a~n~ 284 (292)
...+.+|+.+.|.|.+ .+.|.|. +.|+++++.+......++.+..... .......|.|..+..+|. |.|+|.|.|.
T Consensus 22 ~~~~~~G~~v~l~C~~-~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~ 99 (122)
T 2cry_A 22 TQHALHGEKGQIKCFI-RSTPPPDRIAWSWKENVLESGTSGRYTVETIST-EEGVISTLTISNIVRADFQTIYNCTAWNS 99 (122)
T ss_dssp CCCCCTTSCCCCCEEE-CCSSCCSEEEEESSSCEECSEEETTEEEEEEEE-TTEEEEEEECTTCCHHHHHSCEEEEEECS
T ss_pred eEEEecCCCEEEEEEE-eecCCCcEeEEEECCEEccCCCCCCEEEEEecC-CCceEEEEEEcCCChhhCCceEEEEEECC
Confidence 4467889999999998 8999886 9999999988632233333321100 001133689999999998 9999999999
Q ss_pred cccccc
Q psy15128 285 RNQQQH 290 (292)
Q Consensus 285 ~g~~~~ 290 (292)
.|.+..
T Consensus 100 ~G~~~~ 105 (122)
T 2cry_A 100 FGSDTE 105 (122)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 998764
Done!