Query psy15130
Match_columns 263
No_of_seqs 189 out of 746
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 21:21:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h7n_A 5-aminolaevulinic acid 100.0 4.2E-77 1.4E-81 555.6 10.6 198 28-243 114-336 (342)
2 1w5q_A Delta-aminolevulinic ac 100.0 3.7E-77 1.3E-81 554.8 9.8 197 28-243 110-331 (337)
3 1w1z_A Delta-aminolevulinic ac 100.0 4.2E-77 1.4E-81 552.9 10.0 195 28-242 106-324 (328)
4 1pv8_A Delta-aminolevulinic ac 100.0 2E-77 6.9E-82 555.6 7.7 198 28-243 103-325 (330)
5 3obk_A Delta-aminolevulinic ac 100.0 2.6E-76 8.9E-81 551.9 11.4 197 28-243 117-339 (356)
6 1l6s_A Porphobilinogen synthas 100.0 1.9E-76 6.5E-81 547.6 10.4 195 28-242 100-317 (323)
7 2axy_A Poly(RC)-binding protei 96.0 0.0011 3.9E-08 48.2 -0.0 55 167-225 16-73 (73)
8 2anr_A Neuro-oncological ventr 95.1 0.012 4E-07 48.3 3.0 57 166-227 114-178 (178)
9 2p2r_A Poly(RC)-binding protei 95.0 0.0091 3.1E-07 43.3 1.8 54 167-225 16-75 (76)
10 2hh2_A KH-type splicing regula 94.7 0.035 1.2E-06 43.1 4.5 57 165-226 16-81 (107)
11 1wvn_A Poly(RC)-binding protei 93.9 0.019 6.7E-07 42.1 1.6 54 167-225 17-76 (82)
12 1j5k_A Heterogeneous nuclear r 93.5 0.023 7.7E-07 42.6 1.2 53 167-224 25-83 (89)
13 1we8_A Tudor and KH domain con 93.1 0.014 4.7E-07 45.0 -0.6 61 165-230 24-92 (104)
14 1dtj_A RNA-binding neurooncolo 92.5 0.05 1.7E-06 39.0 1.9 55 166-225 13-76 (76)
15 1x4m_A FAR upstream element bi 92.3 0.063 2.1E-06 40.6 2.3 54 167-225 26-87 (94)
16 1x4n_A FAR upstream element bi 91.6 0.097 3.3E-06 39.4 2.6 54 167-225 26-85 (92)
17 1zzk_A Heterogeneous nuclear r 91.4 0.089 3E-06 38.6 2.2 55 165-224 16-76 (82)
18 2jzx_A Poly(RC)-binding protei 91.2 0.058 2E-06 43.2 1.1 53 167-224 100-159 (160)
19 2jvz_A KH type-splicing, FAR u 90.5 0.14 4.9E-06 40.8 2.7 58 166-228 12-77 (164)
20 2jvz_A KH type-splicing, FAR u 90.2 0.15 5.1E-06 40.7 2.6 53 165-222 100-158 (164)
21 2anr_A Neuro-oncological ventr 89.6 0.12 4.2E-06 42.1 1.7 58 167-229 17-83 (178)
22 1ec6_A RNA-binding protein NOV 88.5 0.17 5.9E-06 37.4 1.6 53 167-224 14-75 (87)
23 3krm_A Insulin-like growth fac 87.5 0.21 7.1E-06 40.1 1.7 57 167-227 14-76 (163)
24 2hh3_A KH-type splicing regula 87.2 0.3 1E-05 38.1 2.3 55 165-224 20-80 (106)
25 1j4w_A FUSE binding protein; s 86.7 0.26 8.8E-06 40.1 1.8 53 165-222 113-174 (174)
26 2opv_A KHSRP protein; KH domai 85.5 0.33 1.1E-05 35.8 1.8 54 165-223 23-84 (85)
27 2dgr_A Ring finger and KH doma 84.8 0.28 9.4E-06 36.8 1.0 53 167-224 21-76 (83)
28 3krm_A Insulin-like growth fac 80.4 0.54 1.8E-05 37.6 1.2 55 165-224 94-156 (163)
29 1vig_A Vigilin; RNA-binding pr 79.3 1.5 5.3E-05 31.3 3.2 49 168-220 17-68 (71)
30 1j4w_A FUSE binding protein; s 76.3 0.67 2.3E-05 37.6 0.6 54 167-225 14-73 (174)
31 2ctf_A Vigilin; K homology typ 76.0 1.9 6.5E-05 33.3 3.1 52 167-222 38-90 (102)
32 2jzx_A Poly(RC)-binding protei 74.4 0.29 9.9E-06 39.1 -2.0 55 167-225 16-73 (160)
33 3lye_A Oxaloacetate acetyl hyd 74.0 15 0.00052 33.6 9.1 155 82-249 107-292 (307)
34 3nav_A Tryptophan synthase alp 72.5 4.7 0.00016 36.1 5.2 95 111-221 6-128 (271)
35 2cte_A Vigilin; K homology typ 68.7 1.2 4.2E-05 33.4 0.5 54 167-224 28-84 (94)
36 3fa4_A 2,3-dimethylmalate lyas 65.9 31 0.0011 31.5 9.3 130 28-194 69-210 (302)
37 2ctm_A Vigilin; K homology typ 64.6 4.5 0.00015 30.6 2.9 48 168-220 29-81 (95)
38 2ctl_A Vigilin; K homology typ 64.5 4.9 0.00017 30.5 3.1 51 167-221 28-84 (97)
39 1zlp_A PSR132, petal death pro 64.5 26 0.00089 32.2 8.5 130 27-196 89-230 (318)
40 3eol_A Isocitrate lyase; seatt 63.8 8.2 0.00028 37.3 5.2 112 82-198 164-313 (433)
41 1wbh_A KHG/KDPG aldolase; lyas 63.6 6.7 0.00023 33.5 4.1 40 158-197 121-162 (214)
42 1vhc_A Putative KHG/KDPG aldol 63.1 6.8 0.00023 33.8 4.1 40 158-197 122-163 (224)
43 3i4e_A Isocitrate lyase; struc 62.9 13 0.00044 36.1 6.3 112 82-198 171-318 (439)
44 1mxs_A KDPG aldolase; 2-keto-3 57.8 6.8 0.00023 33.8 3.2 40 158-197 131-172 (225)
45 2ctk_A Vigilin; K homology typ 56.6 7.7 0.00026 29.8 3.0 50 168-221 29-81 (104)
46 3lg3_A Isocitrate lyase; conse 56.4 13 0.00045 36.0 5.2 112 82-198 171-318 (435)
47 1f8m_A Isocitrate lyase, ICL; 56.3 28 0.00097 33.5 7.5 91 103-198 201-314 (429)
48 2ojp_A DHDPS, dihydrodipicolin 56.2 49 0.0017 29.1 8.5 114 60-198 13-134 (292)
49 2e3u_A PH-DIM2P, hypothetical 56.1 4 0.00014 35.7 1.4 55 168-228 141-195 (219)
50 2yw3_A 4-hydroxy-2-oxoglutarat 55.9 12 0.00041 31.6 4.3 40 158-197 116-157 (207)
51 4e38_A Keto-hydroxyglutarate-a 50.6 15 0.0005 32.4 4.1 41 157-197 138-180 (232)
52 3cpr_A Dihydrodipicolinate syn 50.3 81 0.0028 28.0 9.0 113 61-198 29-149 (304)
53 3cz5_A Two-component response 50.2 33 0.0011 25.2 5.5 49 166-219 51-102 (153)
54 1xky_A Dihydrodipicolinate syn 49.8 71 0.0024 28.3 8.6 113 61-198 25-145 (301)
55 2v9d_A YAGE; dihydrodipicolini 49.4 56 0.0019 29.7 8.0 113 61-198 44-164 (343)
56 3vnd_A TSA, tryptophan synthas 48.2 28 0.00097 30.9 5.7 44 177-221 81-126 (267)
57 2r8w_A AGR_C_1641P; APC7498, d 48.1 77 0.0026 28.6 8.7 113 61-198 47-167 (332)
58 3d0c_A Dihydrodipicolinate syn 48.0 70 0.0024 28.6 8.3 112 61-198 25-144 (314)
59 3jte_A Response regulator rece 46.3 35 0.0012 24.6 5.1 49 165-218 48-99 (143)
60 3tak_A DHDPS, dihydrodipicolin 45.9 80 0.0027 27.7 8.2 114 60-198 13-134 (291)
61 3eod_A Protein HNR; response r 44.3 25 0.00084 25.0 3.9 50 165-219 50-102 (130)
62 3dz1_A Dihydrodipicolinate syn 43.9 83 0.0028 28.0 8.1 114 60-198 20-141 (313)
63 2wkj_A N-acetylneuraminate lya 43.4 69 0.0024 28.4 7.5 114 60-198 23-145 (303)
64 2pln_A HP1043, response regula 42.9 36 0.0012 24.4 4.7 47 165-218 61-108 (137)
65 3eul_A Possible nitrate/nitrit 42.7 35 0.0012 25.0 4.6 49 165-218 60-111 (152)
66 3kcn_A Adenylate cyclase homol 42.5 57 0.002 23.9 5.8 47 167-218 49-98 (151)
67 3b4u_A Dihydrodipicolinate syn 42.0 79 0.0027 27.8 7.6 115 60-198 15-140 (294)
68 2vc6_A MOSA, dihydrodipicolina 41.6 1E+02 0.0035 27.0 8.2 112 62-198 14-133 (292)
69 2qxy_A Response regulator; reg 41.3 32 0.0011 24.8 4.1 49 165-218 47-97 (142)
70 3flu_A DHDPS, dihydrodipicolin 40.7 1.1E+02 0.0038 26.9 8.3 114 60-198 19-140 (297)
71 2rfg_A Dihydrodipicolinate syn 40.5 90 0.0031 27.6 7.7 112 62-198 14-133 (297)
72 3na8_A Putative dihydrodipicol 39.4 85 0.0029 28.1 7.4 113 61-198 37-157 (315)
73 1f6k_A N-acetylneuraminate lya 39.4 88 0.003 27.5 7.4 112 61-198 16-137 (293)
74 1srr_A SPO0F, sporulation resp 39.2 58 0.002 22.7 5.2 48 166-218 47-97 (124)
75 3hdg_A Uncharacterized protein 39.1 36 0.0012 24.3 4.1 49 165-218 50-101 (137)
76 1tmy_A CHEY protein, TMY; chem 38.9 45 0.0015 23.1 4.5 48 166-218 47-97 (120)
77 2ehh_A DHDPS, dihydrodipicolin 38.6 1.4E+02 0.0047 26.2 8.6 113 60-198 13-133 (294)
78 3s5o_A 4-hydroxy-2-oxoglutarat 38.3 1.3E+02 0.0046 26.6 8.5 114 60-198 26-149 (307)
79 3fkr_A L-2-keto-3-deoxyarabona 38.2 1.5E+02 0.0051 26.3 8.8 116 60-200 20-146 (309)
80 3eb2_A Putative dihydrodipicol 37.8 1E+02 0.0036 27.2 7.7 114 60-198 16-137 (300)
81 1s2w_A Phosphoenolpyruvate pho 37.8 27 0.00094 31.5 4.0 101 82-195 98-213 (295)
82 2yxg_A DHDPS, dihydrodipicolin 37.5 1.2E+02 0.0041 26.5 8.0 113 60-198 13-133 (289)
83 1o5k_A DHDPS, dihydrodipicolin 37.5 1.2E+02 0.0041 26.8 8.1 113 60-198 25-145 (306)
84 1ujp_A Tryptophan synthase alp 37.1 27 0.00093 30.8 3.8 37 157-196 33-96 (271)
85 3qze_A DHDPS, dihydrodipicolin 37.0 1.6E+02 0.0056 26.2 8.9 113 61-198 36-156 (314)
86 2hqr_A Putative transcriptiona 36.5 48 0.0017 26.1 4.8 47 165-218 43-90 (223)
87 3l21_A DHDPS, dihydrodipicolin 36.4 1.3E+02 0.0043 26.8 8.0 114 60-198 27-148 (304)
88 3hv2_A Response regulator/HD d 36.3 83 0.0028 23.0 5.9 49 165-218 57-108 (153)
89 3b2n_A Uncharacterized protein 36.3 53 0.0018 23.5 4.7 48 166-218 49-99 (133)
90 3h5d_A DHDPS, dihydrodipicolin 35.4 1.8E+02 0.0062 25.8 9.0 113 60-198 19-141 (311)
91 2qnd_A FMR1 protein; KH domain 35.4 13 0.00046 29.7 1.4 53 167-223 78-141 (144)
92 3kto_A Response regulator rece 35.3 42 0.0014 24.2 4.0 47 167-218 51-102 (136)
93 3si9_A DHDPS, dihydrodipicolin 35.3 1.6E+02 0.0054 26.4 8.6 114 60-198 34-155 (315)
94 2rjn_A Response regulator rece 35.0 63 0.0021 23.7 5.0 32 166-197 51-85 (154)
95 3hzh_A Chemotaxis response reg 34.5 63 0.0021 24.0 5.0 48 166-218 83-133 (157)
96 3lab_A Putative KDPG (2-keto-3 34.3 37 0.0013 29.7 4.1 40 157-196 123-164 (217)
97 3i7m_A XAA-Pro dipeptidase; st 34.0 14 0.0005 28.1 1.3 32 107-139 2-34 (140)
98 2zay_A Response regulator rece 33.8 77 0.0026 22.8 5.2 48 166-218 52-104 (147)
99 4dad_A Putative pilus assembly 33.8 41 0.0014 24.4 3.7 34 165-198 66-102 (146)
100 3a5f_A Dihydrodipicolinate syn 33.6 75 0.0026 27.9 6.0 113 60-198 14-134 (291)
101 1dbw_A Transcriptional regulat 33.5 75 0.0026 22.3 5.0 48 166-218 47-97 (126)
102 2h9a_B CO dehydrogenase/acetyl 33.4 94 0.0032 28.3 6.8 37 159-196 80-127 (310)
103 3qfe_A Putative dihydrodipicol 33.1 1.7E+02 0.0058 26.1 8.4 114 60-198 22-146 (318)
104 4e7p_A Response regulator; DNA 32.9 75 0.0026 23.2 5.1 49 165-218 65-116 (150)
105 2pl1_A Transcriptional regulat 32.7 94 0.0032 21.3 5.4 48 166-218 44-94 (121)
106 1qkk_A DCTD, C4-dicarboxylate 32.4 81 0.0028 23.1 5.2 49 165-218 46-97 (155)
107 3cnb_A DNA-binding response re 32.4 46 0.0016 23.7 3.7 49 165-218 53-106 (143)
108 3f6c_A Positive transcription 32.3 47 0.0016 23.5 3.8 33 165-197 45-80 (134)
109 2ekc_A AQ_1548, tryptophan syn 31.3 35 0.0012 29.6 3.4 19 178-196 81-99 (262)
110 3crn_A Response regulator rece 30.1 95 0.0032 22.1 5.2 49 165-218 46-97 (132)
111 2q5c_A NTRC family transcripti 29.8 65 0.0022 26.8 4.7 38 164-213 49-86 (196)
112 3c3w_A Two component transcrip 29.6 85 0.0029 25.1 5.3 48 166-218 47-97 (225)
113 3cfy_A Putative LUXO repressor 29.5 82 0.0028 22.8 4.8 48 166-218 48-98 (137)
114 2qjg_A Putative aldolase MJ040 29.5 66 0.0023 27.2 4.8 37 160-198 173-209 (273)
115 2qiw_A PEP phosphonomutase; st 29.2 55 0.0019 28.9 4.4 104 82-194 97-207 (255)
116 1p2f_A Response regulator; DRR 27.7 1.6E+02 0.0053 23.0 6.4 49 165-218 42-93 (220)
117 3m5v_A DHDPS, dihydrodipicolin 27.6 2.5E+02 0.0086 24.6 8.4 113 62-198 21-141 (301)
118 2hjp_A Phosphonopyruvate hydro 27.5 67 0.0023 28.9 4.7 100 82-195 94-209 (290)
119 3hdv_A Response regulator; PSI 27.4 44 0.0015 23.8 2.9 46 167-217 53-102 (136)
120 3tr9_A Dihydropteroate synthas 27.4 1.3E+02 0.0045 27.6 6.7 43 151-194 47-108 (314)
121 1tx2_A DHPS, dihydropteroate s 27.2 1.2E+02 0.0041 27.4 6.3 43 152-195 62-119 (297)
122 3f4w_A Putative hexulose 6 pho 26.5 98 0.0033 24.9 5.2 34 162-195 21-57 (211)
123 3heb_A Response regulator rece 26.3 91 0.0031 22.7 4.6 49 165-218 58-111 (152)
124 1qop_A Tryptophan synthase alp 26.2 75 0.0026 27.4 4.7 40 178-218 81-122 (268)
125 3rqi_A Response regulator prot 26.1 1E+02 0.0036 23.6 5.1 49 165-218 50-101 (184)
126 1mvo_A PHOP response regulator 26.0 79 0.0027 22.3 4.1 48 166-218 47-97 (136)
127 3gl9_A Response regulator; bet 26.0 1.2E+02 0.0042 21.3 5.1 49 165-218 45-98 (122)
128 3usb_A Inosine-5'-monophosphat 25.7 91 0.0031 29.8 5.5 60 159-224 261-324 (511)
129 1w3i_A EDA, 2-keto-3-deoxy glu 25.4 3.3E+02 0.011 23.8 8.7 111 60-198 11-130 (293)
130 3e96_A Dihydrodipicolinate syn 25.4 1.7E+02 0.0059 26.0 7.0 131 30-198 5-144 (316)
131 3ixl_A Amdase, arylmalonate de 25.2 73 0.0025 27.3 4.3 82 112-195 105-209 (240)
132 3kht_A Response regulator; PSI 25.1 86 0.0029 22.5 4.2 49 165-218 50-103 (144)
133 2qsj_A DNA-binding response re 25.1 49 0.0017 24.2 2.9 49 165-218 49-100 (154)
134 2vp8_A Dihydropteroate synthas 24.8 1.2E+02 0.0039 27.9 5.8 59 152-218 64-137 (318)
135 3cg0_A Response regulator rece 24.5 87 0.003 22.1 4.0 32 166-198 54-89 (140)
136 2nuw_A 2-keto-3-deoxygluconate 24.4 2.6E+02 0.009 24.4 7.9 111 60-198 11-130 (288)
137 1k68_A Phytochrome response re 24.4 1E+02 0.0035 21.5 4.3 48 165-217 54-106 (140)
138 3r12_A Deoxyribose-phosphate a 24.0 3.6E+02 0.012 24.1 8.8 153 70-259 55-219 (260)
139 3s1x_A Probable transaldolase; 23.9 51 0.0018 29.0 3.2 71 81-175 115-190 (223)
140 3ngj_A Deoxyribose-phosphate a 23.1 3.5E+02 0.012 23.8 8.5 153 70-259 39-203 (239)
141 1zgz_A Torcad operon transcrip 23.1 1.5E+02 0.0051 20.4 5.0 47 166-218 46-95 (122)
142 3f4w_A Putative hexulose 6 pho 23.1 70 0.0024 25.8 3.6 115 27-195 41-163 (211)
143 1p6q_A CHEY2; chemotaxis, sign 23.0 1.5E+02 0.0051 20.6 5.0 49 165-218 50-103 (129)
144 2qr3_A Two-component system re 22.9 87 0.003 22.1 3.8 47 166-217 47-101 (140)
145 1k66_A Phytochrome response re 22.8 1.4E+02 0.0047 21.1 4.9 48 165-217 61-113 (149)
146 2cpq_A FragIle X mental retard 22.6 30 0.001 26.6 1.2 54 169-227 28-86 (91)
147 3lmz_A Putative sugar isomeras 22.4 2.1E+02 0.0073 23.3 6.5 90 82-189 33-125 (257)
148 4fo4_A Inosine 5'-monophosphat 22.4 1.2E+02 0.0042 28.0 5.6 59 160-224 114-176 (366)
149 3t6k_A Response regulator rece 22.2 1.8E+02 0.0061 20.8 5.5 49 165-218 47-100 (136)
150 2rdm_A Response regulator rece 22.0 2E+02 0.007 19.9 5.6 33 166-198 50-86 (132)
151 3lua_A Response regulator rece 22.0 1.2E+02 0.0043 21.5 4.5 49 165-218 49-103 (140)
152 1vzw_A Phosphoribosyl isomeras 21.9 1.5E+02 0.0053 24.3 5.6 43 147-195 30-79 (244)
153 2hmc_A AGR_L_411P, dihydrodipi 21.9 2.1E+02 0.0073 26.0 7.0 112 61-200 39-160 (344)
154 2a4a_A Deoxyribose-phosphate a 21.6 3.2E+02 0.011 24.6 8.0 81 151-240 104-196 (281)
155 1xg4_A Probable methylisocitra 21.5 70 0.0024 28.9 3.6 95 82-195 98-207 (295)
156 3snk_A Response regulator CHEY 21.4 78 0.0027 22.6 3.3 48 166-218 59-109 (135)
157 3r8r_A Transaldolase; pentose 21.3 50 0.0017 28.8 2.5 71 81-175 113-188 (212)
158 3i42_A Response regulator rece 21.1 1.3E+02 0.0044 21.0 4.4 34 165-198 46-84 (127)
159 2yzr_A Pyridoxal biosynthesis 21.1 70 0.0024 29.9 3.6 18 157-174 132-149 (330)
160 4fxs_A Inosine-5'-monophosphat 20.9 1.7E+02 0.006 27.8 6.4 58 160-223 237-298 (496)
161 1qwg_A PSL synthase;, (2R)-pho 20.9 52 0.0018 29.6 2.7 27 148-174 143-169 (251)
162 3gt7_A Sensor protein; structu 20.8 1.9E+02 0.0067 21.1 5.5 49 165-218 50-103 (154)
163 2jk1_A HUPR, hydrogenase trans 20.4 1.5E+02 0.0052 21.1 4.7 33 165-197 43-78 (139)
164 1a04_A Nitrate/nitrite respons 20.2 1.3E+02 0.0044 23.4 4.6 48 166-218 51-101 (215)
No 1
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=100.00 E-value=4.2e-77 Score=555.57 Aligned_cols=198 Identities=21% Similarity=0.247 Sum_probs=185.6
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCc
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQ 106 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psd 106 (263)
-++|.||+.|||++|+|||||||||+||||||++++|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 114 rair~iK~~~pdl~VitDvcLc~YT~HGHcGil~~~g~V~-ND~Tl----~~Lak~Als~A~AGAdiVAPSdMM------ 182 (342)
T 1h7n_A 114 QGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTIN-RERSV----SRLAAVAVNYAKAGAHCVAPSDMI------ 182 (342)
T ss_dssp HHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBC-HHHHH----HHHHHHHHHHHHHTCSEEEECCCC------
T ss_pred HHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCc-cHHHH----HHHHHHHHHHHHcCCCeeeccccc------
Confidence 5799999999999999999999999999999998889999 99998 4577999999999 9999977777
Q ss_pred ccchhHHHHHHHHHhCCC-CCceeeee-eccccc--ccccc---------cccccccch---hHHHHHHHhchhcCCCee
Q psy15130 107 TSATHIKDIRQKTANLSD-THKRLLQC-SKTLLQ--LNFLK---------HVQTNEFHC---IARCIAQARDVSQGADFL 170 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~-~~v~im~y-~k~~ss--gPFRd---------~~~~yq~~~---~~~~~e~~~Di~EGAD~I 170 (263)
||||++||++||++|| +|+.||+| +||+|+ ||||| +|++||++| +++++|+.+|++||||||
T Consensus 183 --DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~v 260 (342)
T 1h7n_A 183 --DGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGI 260 (342)
T ss_dssp --TTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEE
T ss_pred --ccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeE
Confidence 9999999999999999 99999999 888888 99997 589999987 677899999999999999
Q ss_pred EecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH--------HHhhccCCCCCccccccccccccc
Q psy15130 171 MVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI--------LEKIAEDPSSGSCSNVSYALRYGT 242 (263)
Q Consensus 171 mVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~--------l~kia~dp~ags~l~iSY~~l~Gp 242 (263)
|||||++|||||+++|++++++|+++|| |||||+|||+|+++| +|.+....++|++++|||++.+.+
T Consensus 261 MVKPal~YLDIi~~vk~~~p~~P~aaYq-----VSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a 335 (342)
T 1h7n_A 261 IVKPSTFYLDIMRDASEICKDLPICAYH-----VSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFL 335 (342)
T ss_dssp EEESSGGGHHHHHHHHHHTTTSCEEEEE-----CHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred EEecCccHHHHHHHHHHhccCCCeEEEE-----cCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEEeecHHHHH
Confidence 9999999999999999999899999999 999999999999987 888888899999999999987755
Q ss_pred c
Q psy15130 243 E 243 (263)
Q Consensus 243 ~ 243 (263)
.
T Consensus 336 ~ 336 (342)
T 1h7n_A 336 D 336 (342)
T ss_dssp H
T ss_pred H
Confidence 3
No 2
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=100.00 E-value=3.7e-77 Score=554.75 Aligned_cols=197 Identities=23% Similarity=0.303 Sum_probs=184.9
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCc
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQ 106 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psd 106 (263)
-++|.||+.|||++|+|||||||||+||||||++++|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 110 rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~V~-ND~Tl----~~L~k~Als~A~AGADiVAPSdMM------ 178 (337)
T 1w5q_A 110 RATRALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVL-NDVSI----DVLVRQALSHAEAGAQVVAPSDMM------ 178 (337)
T ss_dssp HHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBC-HHHHH----HHHHHHHHHHHHTTCSEEEECSCC------
T ss_pred HHHHHHHHHCCCeEEEEeeecccCCCCCcceeeCCCCcCc-cHHHH----HHHHHHHHHHHHcCCCeEeccccc------
Confidence 4789999999999999999999999999999998889999 99998 3577999999999 9999977777
Q ss_pred ccchhHHHHHHHHHhCCCCCceeeee-eccccc--ccccc-----------cccccccch---hHHHHHHHhchhcCCCe
Q psy15130 107 TSATHIKDIRQKTANLSDTHKRLLQC-SKTLLQ--LNFLK-----------HVQTNEFHC---IARCIAQARDVSQGADF 169 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~~~v~im~y-~k~~ss--gPFRd-----------~~~~yq~~~---~~~~~e~~~Di~EGAD~ 169 (263)
||||++||++||++||+|+.||+| +||+|+ ||||| +|++||++| .++++|+.+|++|||||
T Consensus 179 --DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~ 256 (337)
T 1w5q_A 179 --DGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADM 256 (337)
T ss_dssp --TTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSE
T ss_pred --ccHHHHHHHHHHHCCCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCE
Confidence 999999999999999999999999 888888 99996 589999987 77789999999999999
Q ss_pred eEecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH-------HHhhccCCCCCccccccccccccc
Q psy15130 170 LMVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI-------LEKIAEDPSSGSCSNVSYALRYGT 242 (263)
Q Consensus 170 ImVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~-------l~kia~dp~ags~l~iSY~~l~Gp 242 (263)
||||||++|||||+++|+++ ++|+++|| |||||+|||+|+++| +|.+....++|++++|||++.+.+
T Consensus 257 vMVKPal~YLDIir~vk~~~-~~PvaaYq-----VSGEYAMikaAa~~GwiD~~~v~Esl~~~kRAGAd~IiTYfA~~~a 330 (337)
T 1w5q_A 257 VMVKPGMPYLDIVRRVKDEF-RAPTFVYQ-----VSGEYAMHMGAIQNGWLAESVILESLTAFKRAGADGILTYFAKQAA 330 (337)
T ss_dssp EEEESCGGGHHHHHHHHHHH-CSCEEEEE-----CHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHTCSEEEETTHHHHH
T ss_pred EEEcCCCchHHHHHHHHHhc-CCCEEEEE-----cCcHHHHHHHHHHcCCccHHHHHHHHHHHHhcCCCEEeeecHHHHH
Confidence 99999999999999999998 89999999 999999999999976 888899999999999999998765
Q ss_pred c
Q psy15130 243 E 243 (263)
Q Consensus 243 ~ 243 (263)
.
T Consensus 331 ~ 331 (337)
T 1w5q_A 331 E 331 (337)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=100.00 E-value=4.2e-77 Score=552.86 Aligned_cols=195 Identities=19% Similarity=0.192 Sum_probs=183.1
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCc
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQ 106 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psd 106 (263)
-++|.||+.|||++|+|||||||||+||||||++ +|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 106 rair~iK~~~p~l~vitDvcLc~YT~HGHcGil~-~g~V~-ND~Tl----~~L~k~Als~A~AGADiVAPSdMM------ 173 (328)
T 1w1z_A 106 QAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIIL-NDETV----EVLQKMAVSHAEAGADFVSPSDMM------ 173 (328)
T ss_dssp HHHHHHHHHSTTSEEEEEECSTTTSTTSCSSEES-SSCEE-HHHHH----HHHHHHHHHHHHHTCSEEEECSCC------
T ss_pred HHHHHHHHHCCCeEEEEeeecccCCCCCceeecc-CCcCc-cHHHH----HHHHHHHHHHHHcCCCeEeccccc------
Confidence 4789999999999999999999999999999997 79999 99998 3577999999999 9999977777
Q ss_pred ccchhHHHHHHHHHhCCCCCceeeee-eccccc--ccccc---------cccccccch---hHHHHHHHhchhcCCCeeE
Q psy15130 107 TSATHIKDIRQKTANLSDTHKRLLQC-SKTLLQ--LNFLK---------HVQTNEFHC---IARCIAQARDVSQGADFLM 171 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~~~v~im~y-~k~~ss--gPFRd---------~~~~yq~~~---~~~~~e~~~Di~EGAD~Im 171 (263)
||||++||++||++||+|+.||+| +||+|+ ||||| +|++||++| .++++|+.+|++|||||||
T Consensus 174 --DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vM 251 (328)
T 1w1z_A 174 --DGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVM 251 (328)
T ss_dssp --TTHHHHHHHHHHHTTCTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEE
T ss_pred --ccHHHHHHHHHHhCCCCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEE
Confidence 999999999999999999999999 888888 99997 589999987 7778999999999999999
Q ss_pred ecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH--------HHhhccCCCCCccccccccccccc
Q psy15130 172 VKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI--------LEKIAEDPSSGSCSNVSYALRYGT 242 (263)
Q Consensus 172 VKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~--------l~kia~dp~ags~l~iSY~~l~Gp 242 (263)
||||++|||||+++|+++ ++|+++|| |||||+|+|+|+++| +|.+....++|++++|||++.+.+
T Consensus 252 VKPal~YLDIir~vk~~~-~~P~aaYq-----VSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a 324 (328)
T 1w1z_A 252 VKPGLAYLDIVWRTKERF-DVPVAIYH-----VSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAA 324 (328)
T ss_dssp EESCGGGHHHHHHHHHHH-CSCEEEEE-----CHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHH
T ss_pred EcCCCchHHHHHHHHHhc-CCCEEEEE-----ccHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeecHHHHH
Confidence 999999999999999998 89999999 999999999999987 888888899999999999987654
No 4
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=100.00 E-value=2e-77 Score=555.64 Aligned_cols=198 Identities=25% Similarity=0.308 Sum_probs=164.4
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCc
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQ 106 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psd 106 (263)
-++|.||+.|||++|+|||||||||+||||||++++|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 103 ~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~-ND~Tl----~~La~~Als~A~AGAdiVAPSdMM------ 171 (330)
T 1pv8_A 103 EAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFR-AEESR----QRLAEVALAYAKAGCQVVAPSDMM------ 171 (330)
T ss_dssp HHHHHHHHHSTTSEEEEEECCC---------------CHH-HHHHH----HHHHHHHHHHHHHTCSEEEECC--------
T ss_pred HHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCc-cHHHH----HHHHHHHHHHHHcCCCeeeccccc------
Confidence 5899999999999999999999999999999998889999 99998 4577999999999 9999977777
Q ss_pred ccchhHHHHHHHHHhCCCCC-ceeeee-eccccc--ccccc---------cccccccch---hHHHHHHHhchhcCCCee
Q psy15130 107 TSATHIKDIRQKTANLSDTH-KRLLQC-SKTLLQ--LNFLK---------HVQTNEFHC---IARCIAQARDVSQGADFL 170 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~~~-v~im~y-~k~~ss--gPFRd---------~~~~yq~~~---~~~~~e~~~Di~EGAD~I 170 (263)
||||++||++||++||+| +.||+| +||+|+ ||||| +|++||++| +++++|+.+|++||||||
T Consensus 172 --DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~v 249 (330)
T 1pv8_A 172 --DGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADML 249 (330)
T ss_dssp --CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBE
T ss_pred --ccHHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceE
Confidence 999999999999999999 999999 888888 99997 589999987 677899999999999999
Q ss_pred EecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH--------HHhhccCCCCCccccccccccccc
Q psy15130 171 MVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI--------LEKIAEDPSSGSCSNVSYALRYGT 242 (263)
Q Consensus 171 mVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~--------l~kia~dp~ags~l~iSY~~l~Gp 242 (263)
|||||++|||||+++|++++++|+++|| |||||+|||+|+++| +|.+....++|++++|||++.+.+
T Consensus 250 MVKPal~YLDIi~~vk~~~p~~P~aaYq-----VSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a 324 (330)
T 1pv8_A 250 MVKPGMPYLDIVREVKDKHPDLPLAVYH-----VSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLL 324 (330)
T ss_dssp EEESCGGGHHHHHHHHHHSTTSCEEEEE-----CHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHH
T ss_pred EEecCccHHHHHHHHHHhcCCCCeEEEE-----cCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeecHHHHH
Confidence 9999999999999999999899999999 999999999999987 888888899999999999987754
Q ss_pred c
Q psy15130 243 E 243 (263)
Q Consensus 243 ~ 243 (263)
.
T Consensus 325 ~ 325 (330)
T 1pv8_A 325 Q 325 (330)
T ss_dssp H
T ss_pred H
Confidence 3
No 5
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=100.00 E-value=2.6e-76 Score=551.85 Aligned_cols=197 Identities=21% Similarity=0.244 Sum_probs=184.1
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeC-CCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCC
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVK-SNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPI 105 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~-dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Ps 105 (263)
-++|.||+.||+++|+|||||||||+||||||+++ +|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 117 rAir~iK~~~P~l~VitDVcLc~YT~HGHcGil~~~~g~V~-ND~Tl----~~Lak~Als~A~AGADiVAPSdMM----- 186 (356)
T 3obk_A 117 RAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIV-NDLTV----HQLCKQAITLARAGADMVCPSDMM----- 186 (356)
T ss_dssp HHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBCTTTCCBC-HHHHH----HHHHHHHHHHHHHTCSEEEECSCC-----
T ss_pred HHHHHHHHHCCCCEEEEeeccccccCCCcceeeeCCCCCCC-CHHHH----HHHHHHHHHHHHcCCCeEeccccc-----
Confidence 47899999999999999999999999999999987 59999 99998 4577999999999 9999977777
Q ss_pred cccchhHHHHHHHHHhCCCCCceeeee-eccccc--ccccc----------cccccccch---hHHHHHHHhchhcCCCe
Q psy15130 106 QTSATHIKDIRQKTANLSDTHKRLLQC-SKTLLQ--LNFLK----------HVQTNEFHC---IARCIAQARDVSQGADF 169 (263)
Q Consensus 106 dm~DGrI~aIR~aLd~~G~~~v~im~y-~k~~ss--gPFRd----------~~~~yq~~~---~~~~~e~~~Di~EGAD~ 169 (263)
||||++||++||++||+|+.||+| +||+|+ ||||| +|++||++| .++++|+.+|++|||||
T Consensus 187 ---DGrV~aIR~aLd~~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~ 263 (356)
T 3obk_A 187 ---DGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADM 263 (356)
T ss_dssp ---TTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSE
T ss_pred ---cCHHHHHHHHHHHCCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCE
Confidence 999999999999999999999999 888888 99996 489999987 77789999999999999
Q ss_pred eEecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH--------HHhhccCCCCCcccccccccccc
Q psy15130 170 LMVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI--------LEKIAEDPSSGSCSNVSYALRYG 241 (263)
Q Consensus 170 ImVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~--------l~kia~dp~ags~l~iSY~~l~G 241 (263)
||||||++|||||+++|+++ ++|+++|| |||||+|||+|+++| +|.+....++|++++|||++.+.
T Consensus 264 vMVKPal~YLDIi~~vk~~~-~~PvaaYq-----VSGEYAMikAAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~ 337 (356)
T 3obk_A 264 LMVKPGLPYLDVLAKIREKS-KLPMVAYH-----VSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEA 337 (356)
T ss_dssp EEEESSGGGHHHHHHHHHHC-SSCEEEEE-----CHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHH
T ss_pred EEecCCCcHHHHHHHHHhcC-CCCEEEEE-----ccHHHHHHHHHHHcCCccHHHHHHHHHHHHHHcCCCEEehhhHHHH
Confidence 99999999999999999998 89999999 999999999999877 88888889999999999999876
Q ss_pred cc
Q psy15130 242 TE 243 (263)
Q Consensus 242 p~ 243 (263)
+.
T Consensus 338 a~ 339 (356)
T 3obk_A 338 AK 339 (356)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 6
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00 E-value=1.9e-76 Score=547.63 Aligned_cols=195 Identities=23% Similarity=0.237 Sum_probs=182.7
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCc
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQ 106 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psd 106 (263)
-++|.||+.|||++|+|||||||||+||||||++ +|.|+ ||+|| .+|++||++||+| ||+|||||||
T Consensus 100 rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~-~g~V~-ND~Tl----~~Lak~Als~A~AGAdiVAPSdMM------ 167 (323)
T 1l6s_A 100 RMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLC-EHGVD-NDATL----ENLGKQAVVAAAAGADFIAPSAAM------ 167 (323)
T ss_dssp HHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBC-SSSBC-HHHHH----HHHHHHHHHHHHHTCSEEEECSCC------
T ss_pred HHHHHHHHHCCCeEEEEeeeccccCCCCceEecc-CCcCc-cHHHH----HHHHHHHHHHHHcCCCeEeccccc------
Confidence 5799999999999999999999999999999995 79999 99998 3577999999999 9999977777
Q ss_pred ccchhHHHHHHHHHhCCCCCceeeee-eccccc--ccccc--------cccccccch---hHHHHHHHhchhcCCCeeEe
Q psy15130 107 TSATHIKDIRQKTANLSDTHKRLLQC-SKTLLQ--LNFLK--------HVQTNEFHC---IARCIAQARDVSQGADFLMV 172 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~~~v~im~y-~k~~ss--gPFRd--------~~~~yq~~~---~~~~~e~~~Di~EGAD~ImV 172 (263)
||||++||++||++||+|+.||+| +||+|+ ||||| +|++||++| .++++|+.+|++||||||||
T Consensus 168 --DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMV 245 (323)
T 1l6s_A 168 --DGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMV 245 (323)
T ss_dssp --TTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEE
T ss_pred --ccHHHHHHHHHHhCCCCCceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEE
Confidence 999999999999999999999999 888888 99997 489999987 67789999999999999999
Q ss_pred cCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH--------HHhhccCCCCCccccccccccccc
Q psy15130 173 KPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI--------LEKIAEDPSSGSCSNVSYALRYGT 242 (263)
Q Consensus 173 KPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~--------l~kia~dp~ags~l~iSY~~l~Gp 242 (263)
|||++|||||+++|+++ ++|+++|| |||||+|+|+|+++| +|.+....++|++++|||++.+.+
T Consensus 246 KPal~YLDIi~~vk~~~-~~P~aaYq-----VSGEYAMikaAa~~GwiD~~~~vlEsl~~~kRAGAd~IiTYfA~~~a 317 (323)
T 1l6s_A 246 KPAGAYLDIVRELRERT-ELPIGAYQ-----VSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLA 317 (323)
T ss_dssp ESCTTCHHHHHHHHTTC-SSCEEEEE-----CHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred ecCcchhHHHHHHHHhc-CCCeEEEE-----cCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeehhHHHHH
Confidence 99999999999999998 89999999 999999999999987 888888899999999999987654
No 7
>2axy_A Poly(RC)-binding protein 2; protein-DNA complex, DNA binding protein-DNA complex; 1.70A {Homo sapiens} SCOP: d.51.1.1 PDB: 2pqu_A 2py9_A 1ztg_A 3vke_A*
Probab=95.98 E-value=0.0011 Score=48.16 Aligned_cols=55 Identities=27% Similarity=0.295 Sum_probs=42.9
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCC---CCeeecccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPA---YPLFVYQERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~---~Pi~aYqERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|.|. .|+++++.++- .+--...||+|+++|..+.+..|.+++.+++.+|
T Consensus 16 ig~iIGkgG~----~Ik~I~~~tga~I~i~~~~~~er~v~I~G~~~~v~~A~~~I~~~l~ed 73 (73)
T 2axy_A 16 VGSIIGKKGE----SVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEED 73 (73)
T ss_dssp HHHHHCGGGH----HHHHHHHHHCCEEEECSSCCSEEEEEEEECHHHHHHHHHHHHHHHHC-
T ss_pred eeeEECCCCH----HHHHHHHHHCCEEEEecCCCCcEEEEEEeCHHHHHHHHHHHHHHHhcC
Confidence 5678999997 88888887631 1111346899999999999999999999988775
No 8
>2anr_A Neuro-oncological ventral antigen 1; protein-RNA complex, KH domain, hairpin, RNA-binding protein complex; HET: 5BU; 1.94A {Homo sapiens} PDB: 2ann_A*
Probab=95.11 E-value=0.012 Score=48.25 Aligned_cols=57 Identities=33% Similarity=0.457 Sum_probs=46.5
Q ss_pred CCCeeEecCCccHHHHHHHHHhhCCCCCeeec--------ccceeeccCchhHHHHHHHHHHHhhccCCC
Q psy15130 166 GADFLMVKPALPYLDIISEVKSRHPAYPLFVY--------QERCITVSGHFEANEKAMEMILEKIAEDPS 227 (263)
Q Consensus 166 GAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY--------qERvItVSGEyami~aAa~~~l~kia~dp~ 227 (263)
-++.||+|-|. .|+++++.++ .-+-.. .||.|+++|..+.+++|.+++.+.+.++|+
T Consensus 114 ~vg~iIGkgG~----~Ik~i~~~tg-a~I~i~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~e~p~ 178 (178)
T 2anr_A 114 TAGLIIGKGGA----TVKAIMEQSG-AWVQLSQKPDGINLQNRVVTVSGEPEQNRKAVELIIQKIQEDPQ 178 (178)
T ss_dssp HHHHHHCGGGH----HHHHHHHHSS-CEEEECCCC----CCEEEEEEESSHHHHHHHHHHHHHHHHSCCC
T ss_pred heeeeECCCcH----HHHHHHHHHC-CEEEEeCCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHHhCCC
Confidence 36789999997 8888888873 332222 469999999999999999999999999985
No 9
>2p2r_A Poly(RC)-binding protein 2; protein-DNA complex, RNA and DNA binding protein/DNA complex; 1.60A {Homo sapiens}
Probab=94.98 E-value=0.0091 Score=43.26 Aligned_cols=54 Identities=13% Similarity=0.218 Sum_probs=43.0
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeeec------ccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFVY------QERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY------qERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|.|. .|+++++.++ .-+-.. .||.|+++|..+.+..|.+++.+.+.++
T Consensus 16 vg~iIGkgG~----~Ik~I~~~tg-a~I~i~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~~E 75 (76)
T 2p2r_A 16 IGCIIGRQGA----KINEIRQMSG-AQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 75 (76)
T ss_dssp HHHHHCGGGH----HHHHHHHHHC-CEEEECCCCTTCSEEEEEEEECHHHHHHHHHHHHHHHTTC
T ss_pred cceEECCCCh----HHHHHHHHHC-CEEEEcCCCCCCCeEEEEEEeCHHHHHHHHHHHHHHHHcc
Confidence 5678999997 8888888863 333333 3899999999999999999998888765
No 10
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=94.66 E-value=0.035 Score=43.08 Aligned_cols=57 Identities=11% Similarity=0.108 Sum_probs=44.7
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCeee---------cccceeeccCchhHHHHHHHHHHHhhccCC
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLFV---------YQERCITVSGHFEANEKAMEMILEKIAEDP 226 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~a---------YqERvItVSGEyami~aAa~~~l~kia~dp 226 (263)
+=++.||+|-|. .|++|+++++ .-+-. -.||+|+|+|..+.+++|.+++.+.+.+..
T Consensus 16 ~~vG~IIGkgG~----~Ik~I~~~TG-a~I~I~~~~~~~~~~~~r~V~I~G~~e~v~~A~~~I~~~i~e~~ 81 (107)
T 2hh2_A 16 HKCGLVIGRGGE----NVKAINQQTG-AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPL 81 (107)
T ss_dssp GGTTTTSTTTTC----HHHHHHHHSS-SEEEECCCCCTTCCTTEEEEEEESCHHHHHHHHHHHHHHSCSCC
T ss_pred HHcCccCCCCcH----HHHHHHHHhC-CEEEEcCccCCCCCCCceEEEEECCHHHHHHHHHHHHHHHhccc
Confidence 447889999998 8888888863 22222 246999999999999999999988887764
No 11
>1wvn_A Poly(RC)-binding protein 1; KH domain, RNA binding domain, RNA binding protein; 2.10A {Homo sapiens} SCOP: d.51.1.1
Probab=93.95 E-value=0.019 Score=42.14 Aligned_cols=54 Identities=13% Similarity=0.205 Sum_probs=41.5
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeeec------ccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFVY------QERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY------qERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|.|. .|+++++.++ .-+-.. .||.|+++|..+.++.|.+++.+.+.++
T Consensus 17 vg~IIGkgG~----~Ik~I~~~sg-a~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~~~ 76 (82)
T 1wvn_A 17 IGCIIGRQGA----NINEIRQMSG-AQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 76 (82)
T ss_dssp HHHHHCGGGH----HHHHHHHHHC-CEEEECCCCTTCSEEEEEEEECHHHHHHHHHHHHHHTC--
T ss_pred ccceeCCCch----hHHHHHHHhC-CEEEEecCCCCCCceEEEEEcCHHHHHHHHHHHHHHHHhh
Confidence 5678999997 8888888763 222222 3899999999999999999999888877
No 12
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=93.47 E-value=0.023 Score=42.58 Aligned_cols=53 Identities=15% Similarity=0.259 Sum_probs=41.1
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeeec------ccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFVY------QERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY------qERvItVSGEyami~aAa~~~l~kia~ 224 (263)
++.||+|.|. .|++++++++ .-+-.- .||+|+|+|..+.+++|.+++.+.+.+
T Consensus 25 vg~IIGkgG~----~Ik~I~~~tg-a~I~I~~~~~~~~~~~v~I~G~~e~v~~A~~~I~~~i~e 83 (89)
T 1j5k_A 25 AGSIIGKGGQ----RIKQIRHESG-ASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 83 (89)
T ss_dssp HHHHHCGGGH----HHHHHHHHTC-CEEEECSCCSSSSEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred cceeECCCCH----hHHHHHHHhC-CeEEecCCCCCCCccEEEEEcCHHHHHHHHHHHHHHHHh
Confidence 5678999997 8899998873 332222 379999999999999998888776654
No 13
>1we8_A Tudor and KH domain containing protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.51.1.1
Probab=93.05 E-value=0.014 Score=45.04 Aligned_cols=61 Identities=20% Similarity=0.208 Sum_probs=46.5
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCeeec--------ccceeeccCchhHHHHHHHHHHHhhccCCCCCc
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLFVY--------QERCITVSGHFEANEKAMEMILEKIAEDPSSGS 230 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY--------qERvItVSGEyami~aAa~~~l~kia~dp~ags 230 (263)
+-.+.||+|-|. .|+++++.++ .-+-.- .||.|+|+|....+.+|.+++.+.+.++|+-..
T Consensus 24 ~~ig~IIGkgG~----~Ik~I~~~tg-a~I~I~~~~~~~~~~~~~V~I~G~~~~v~~A~~~I~~~i~e~~~~~~ 92 (104)
T 1we8_A 24 RSVGRIIGRGGE----TIRSICKASG-AKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEELRK 92 (104)
T ss_dssp TTHHHHHTTTSH----HHHHHHHHHC-CEEEECCSSCCSSSSEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeeECCCCH----HHHHHHHHHC-CEEEEecCCCCCCCCcceEEEEcCHHHHHHHHHHHHHHHhhChHHHH
Confidence 446789999997 8888888863 332222 389999999999999999999888877765443
No 14
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=92.52 E-value=0.05 Score=38.98 Aligned_cols=55 Identities=15% Similarity=0.177 Sum_probs=40.6
Q ss_pred CCCeeEecCCccHHHHHHHHHhhCCCCCeee---------cccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 166 GADFLMVKPALPYLDIISEVKSRHPAYPLFV---------YQERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 166 GAD~ImVKPg~~yLDII~~ik~~~~~~Pi~a---------YqERvItVSGEyami~aAa~~~l~kia~d 225 (263)
-++.||+|.|. .|+++++.++ .-+-. -.||.|+++|....+..|.+.+.+.+.++
T Consensus 13 ~vg~IIGkgG~----~Ik~I~~~tg-a~I~i~~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~ee 76 (76)
T 1dtj_A 13 LVGAILGKGGK----TLVEYQELTG-ARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 76 (76)
T ss_dssp THHHHHCSTTH----HHHHHHHHHC-CEEEECCTTCCSTTCCEEEEEEEESHHHHHHHHHHHHHHCC--
T ss_pred HcceEECCCch----HHHHHHHHhC-CEEEECcCCCCCCCCceeEEEEEeCHHHHHHHHHHHHHHHhcC
Confidence 35779999997 7888887763 22222 24699999999999999999888877653
No 15
>1x4m_A FAR upstream element binding protein 1; KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.51.1.1
Probab=92.32 E-value=0.063 Score=40.60 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=41.0
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCe--------eecccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPL--------FVYQERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi--------~aYqERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|-|. .|++|+++++ .-+ ..-.||+|+|+|....++.|.+++.+.+.+.
T Consensus 26 vG~IIGkgG~----~Ik~I~~~tg-a~I~I~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~~~ 87 (94)
T 1x4m_A 26 AGLVIGKGGE----TIKQLQERAG-VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQ 87 (94)
T ss_dssp HHHHSCSSSS----HHHHHHHHHT-SEEEECCSCCCSSCSCEEEEEEECTTTHHHHHHHHHHHHCCC
T ss_pred cceEECCCCH----HHHHHHHHHC-CeEEecCCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHhcc
Confidence 5779999998 7777777753 211 1225899999999999999999888777653
No 16
>1x4n_A FAR upstream element binding protein 1; KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.51.1.1 PDB: 2opu_A
Probab=91.62 E-value=0.097 Score=39.38 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=41.0
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeeec------ccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFVY------QERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY------qERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|-|. .|++|++.++ .-+-.. .||.|+++|..+.+.+|.+++.+.+.+.
T Consensus 26 vG~IIGkgG~----~Ik~I~~~tg-a~I~I~~~~~g~~~r~v~I~G~~e~v~~A~~~I~~~i~~~ 85 (92)
T 1x4n_A 26 VGFIIGRGGE----QISRIQQESG-CKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 85 (92)
T ss_dssp HHHHHCSSSH----HHHHHHHHSC-CEEEECSCCTTCSEEEEEEEECHHHHHHHHHHHHHHHHHT
T ss_pred cceeECCCch----HHHHHHHHhC-CEEEEcCCCCCCCccEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 5779999997 8888888873 322222 3699999999999999888886665544
No 17
>1zzk_A Heterogeneous nuclear ribonucleoprotein K; KH domian, alpha-beta fold, DNA binding protein; 0.95A {Homo sapiens} SCOP: d.51.1.1 PDB: 1zzj_A 1zzi_A
Probab=91.44 E-value=0.089 Score=38.64 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=41.0
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCee------ecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLF------VYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~------aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
+-++.||+|.|. .|+++++.++ .-+- .-.||.|+++|..+.+++|.+++.+.+.+
T Consensus 16 ~~vg~iIGkgG~----~Ik~I~~~tg-a~I~i~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~~ 76 (82)
T 1zzk_A 16 DLAGSIIGKGGQ----RIKQIRHESG-ASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 76 (82)
T ss_dssp TTGGGGTCGGGH----HHHHHHHHHC-CEEEECCTTSCSSEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HhcCeeECCCch----HHHHHHHHHC-CEEEEcCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHh
Confidence 446789999997 8888888763 2111 12479999999999999998888766543
No 18
>2jzx_A Poly(RC)-binding protein 2; PCBP2, KH domains, RNA binding, DNA-binding, nucleus, phosph ribonucleoprotein, RNA-binding, RNA binding protein; NMR {Homo sapiens}
Probab=91.25 E-value=0.058 Score=43.19 Aligned_cols=53 Identities=23% Similarity=0.214 Sum_probs=41.1
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeeec-------ccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFVY-------QERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~aY-------qERvItVSGEyami~aAa~~~l~kia~ 224 (263)
++.||+|.|. .|+++++.++ .-+-.. .||.|+++|..+.++.|.+.+.+.+.+
T Consensus 100 ~g~iIGkgG~----~Ik~i~~~tg-a~I~i~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~e 159 (160)
T 2jzx_A 100 CGSLIGKGGC----KIKEIRESTG-AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLE 159 (160)
T ss_dssp HHHHHCGGGH----HHHHHHHHHS-SEECCCCCCSTTCCEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred eeeEECCCCH----HHHHHHHHhC-CeEEECCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHhc
Confidence 5779999997 7888887763 222222 489999999999999999998877665
No 19
>2jvz_A KH type-splicing, FAR upstream element-binding protein 2; RNA binding protein, KH domain, KSRP, posttranscriptional regulation, mRNA decay; NMR {Homo sapiens}
Probab=90.49 E-value=0.14 Score=40.75 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=45.4
Q ss_pred CCCeeEecCCccHHHHHHHHHhhCCCCCee--------ecccceeeccCchhHHHHHHHHHHHhhccCCCC
Q psy15130 166 GADFLMVKPALPYLDIISEVKSRHPAYPLF--------VYQERCITVSGHFEANEKAMEMILEKIAEDPSS 228 (263)
Q Consensus 166 GAD~ImVKPg~~yLDII~~ik~~~~~~Pi~--------aYqERvItVSGEyami~aAa~~~l~kia~dp~a 228 (263)
=++.||+|-|. .|++++++++ .-+- .-.||+|+++|..+.+.+|.+.+++.+.+.+..
T Consensus 12 ~~g~iIGk~G~----~Ik~i~~~tg-~~I~i~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~ii~e~~~~ 77 (164)
T 2jvz_A 12 KAGLVIGKGGE----TIKQLQERAG-VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQG 77 (164)
T ss_dssp CHHHHTCTTTH----HHHHHHHTSC-SEEEECCCTTSSSSSCEEEEEEECHHHHHHHHHHHHHHTTCSSSC
T ss_pred heeEEECCChH----HHHHHHHHhC-CeEEEecCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHHhccCC
Confidence 36779999997 8999999873 3221 224789999999999999999999888876543
No 20
>2jvz_A KH type-splicing, FAR upstream element-binding protein 2; RNA binding protein, KH domain, KSRP, posttranscriptional regulation, mRNA decay; NMR {Homo sapiens}
Probab=90.20 E-value=0.15 Score=40.66 Aligned_cols=53 Identities=13% Similarity=0.230 Sum_probs=41.7
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCeeecc------cceeeccCchhHHHHHHHHHHHhh
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLFVYQ------ERCITVSGHFEANEKAMEMILEKI 222 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aYq------ERvItVSGEyami~aAa~~~l~ki 222 (263)
+-.+.||+|-|. .|+++++.+ ..-+-..+ ||.|+++|....++.|.+++.+.+
T Consensus 100 ~~~g~iIGk~G~----~I~~i~~~t-g~~I~i~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i 158 (164)
T 2jvz_A 100 HSVGVVIGRSGE----MIKKIQNDA-GVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL 158 (164)
T ss_dssp TTHHHHHCSSSH----HHHHHHHHT-CCEEEECCCCTTSSEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred hhccccCCCCcH----hHHHHHHHH-CCeEEEeCCCCCCCcEEEEEEcCHHHHHHHHHHHHHHH
Confidence 347889999997 899999987 44444444 899999999999998888875544
No 21
>2anr_A Neuro-oncological ventral antigen 1; protein-RNA complex, KH domain, hairpin, RNA-binding protein complex; HET: 5BU; 1.94A {Homo sapiens} PDB: 2ann_A*
Probab=89.61 E-value=0.12 Score=42.11 Aligned_cols=58 Identities=26% Similarity=0.230 Sum_probs=44.9
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCC--e-------eecccceeeccCchhHHHHHHHHHHHhhccCCCCC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYP--L-------FVYQERCITVSGHFEANEKAMEMILEKIAEDPSSG 229 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~P--i-------~aYqERvItVSGEyami~aAa~~~l~kia~dp~ag 229 (263)
++.||+|.|. .|+++++.++ .- + -.-.||+|+|+|..+.+.+|.+.+.+.+.+.++..
T Consensus 17 ig~iIGkgG~----~Ik~i~~~tg-~~I~i~~~~~~~~~~~er~v~I~G~~~~v~~A~~~I~~~~~~~~~~~ 83 (178)
T 2anr_A 17 AGSIIGKGGQ----TIVQLQKETG-ATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNV 83 (178)
T ss_dssp HHHHHCGGGH----HHHHHHHHHC-CEEEECCTTCBCTTSSEEEEEEEECHHHHHHHHHHHHHHHTCCCCC-
T ss_pred eeeeECCCcH----HHHHHHHHhC-CeEEEecCCCCCCCCCCceEEEEeCHHHHHHHHHHHHHHHhccCCcc
Confidence 5678999997 8888888753 21 1 12358999999999999999999999998887654
No 22
>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1
Probab=88.47 E-value=0.17 Score=37.39 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=39.6
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCeee---------cccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLFV---------YQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~a---------YqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
++.||+|.|. .|+++++.++ .-+-. -.||.|+++|..+.+..|.+++.+.+.+
T Consensus 14 vG~IIGkgG~----~Ik~I~~~tg-a~I~I~~~~~~~~g~~~r~v~I~G~~~~v~~A~~~I~~~i~~ 75 (87)
T 1ec6_A 14 VGAILGKGGK----TLVEYQELTG-ARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTY 75 (87)
T ss_dssp HHHHHCGGGH----HHHHHHHHHC-CEEEECCTTCBSTTSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred cCeeECCCcH----hHHHHHHHhC-CEEEEccCCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHhc
Confidence 4678999997 7888887763 22111 2479999999999999999988766654
No 23
>3krm_A Insulin-like growth factor 2 mRNA-binding protein 1; KH domain, cell projection, cytoplasm, nucleus, phosphoprotein, translation regulation; 2.75A {Homo sapiens}
Probab=87.46 E-value=0.21 Score=40.05 Aligned_cols=57 Identities=21% Similarity=0.141 Sum_probs=43.6
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCC---CC---eeecccceeeccCchhHHHHHHHHHHHhhccCCC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPA---YP---LFVYQERCITVSGHFEANEKAMEMILEKIAEDPS 227 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~---~P---i~aYqERvItVSGEyami~aAa~~~l~kia~dp~ 227 (263)
++.||+|.|. .|+++++.++- .+ .-.-.||+|+++|..+.+..|...+++.+.+...
T Consensus 14 ~g~iIGk~G~----~Ik~i~~~tg~~I~i~~~~~~~~~~r~v~I~G~~e~v~~A~~~I~~~~~e~~~ 76 (163)
T 3krm_A 14 VGAIIGKKGQ----HIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENF 76 (163)
T ss_dssp HHHHHCGGGH----HHHHHHHHHTCEEEECCCSSTTCSEEEEEEEECHHHHHHHHHHHHHHHHHTTS
T ss_pred cceeECCCcH----HHHHHHHHHCCeEEEcCCCCCCCCceEEEEEcCHHHHHHHHHHHHHHHhcccc
Confidence 5779999997 88888887631 11 1123689999999999999999999888877643
No 24
>2hh3_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=87.18 E-value=0.3 Score=38.12 Aligned_cols=55 Identities=11% Similarity=0.180 Sum_probs=39.8
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCee------ecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLF------VYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~------aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
+=.+.||+|-|. .|++|+++++ .-+- .-.||.|+|+|..+.+++|.+++.+.+.+
T Consensus 20 ~~iG~IIGkgG~----~Ik~I~~~TG-akI~I~~~~~~~~er~V~I~G~~e~v~~A~~~I~~ii~~ 80 (106)
T 2hh3_A 20 HSVGVVIGRSGE----MIKKIQNDAG-VRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQS 80 (106)
T ss_dssp TTHHHHHTTTTH----HHHHHHHHHT-CEEEECSSCSSSSEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHcCccCCCCcH----HHHHHHHHHC-cEEEEecCCCCCceeEEEEEeCHHHHHHHHHHHHHHHhc
Confidence 345678999997 7777777752 2211 12378999999999999888888665544
No 25
>1j4w_A FUSE binding protein; single-stranded DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: d.51.1.1 d.51.1.1
Probab=86.66 E-value=0.26 Score=40.13 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=40.4
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCeee---------cccceeeccCchhHHHHHHHHHHHhh
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLFV---------YQERCITVSGHFEANEKAMEMILEKI 222 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~a---------YqERvItVSGEyami~aAa~~~l~ki 222 (263)
+-++.||+|-|. .|+++++.++ .-+-. -.||.|+++|..+.++.|.+++.+++
T Consensus 113 ~~~g~iIGkgG~----~Ik~I~~~tg-a~I~i~~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i 174 (174)
T 1j4w_A 113 GKTGLIIGKGGE----TIKSISQQSG-ARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 174 (174)
T ss_dssp TTHHHHHCGGGH----HHHHHHHHHC-CEEEEECCCTTTSCTTEEEEEEECCHHHHHHHHHHHHHHC
T ss_pred HHcCeeECCCch----HHHHHHHHHC-CEEEECCCCCCCCCCCceEEEEECCHHHHHHHHHHHHHhC
Confidence 447889999997 8888888763 33222 24699999999999999988887653
No 26
>2opv_A KHSRP protein; KH domain, RNA binding protein, KSRP; NMR {Homo sapiens}
Probab=85.54 E-value=0.33 Score=35.75 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=39.2
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCe--------eecccceeeccCchhHHHHHHHHHHHhhc
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPL--------FVYQERCITVSGHFEANEKAMEMILEKIA 223 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi--------~aYqERvItVSGEyami~aAa~~~l~kia 223 (263)
+=.+.||+|.|. .|++++++++ .-+ -.-.||.|+++|....++.|.+++.+.+.
T Consensus 23 ~~ig~IIGkgG~----~Ik~I~~~tg-a~I~i~~~~~~~~~~er~v~I~G~~~~v~~A~~~I~~i~~ 84 (85)
T 2opv_A 23 GKAGLVIGKGGE----TIKQLQERAG-VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILR 84 (85)
T ss_dssp TTHHHHHTTTTH----HHHHHHHHHT-CEEEECSSSCSSTTSCEEEEEEECHHHHHHHHHHHHHHHT
T ss_pred hheeeeECCCCH----HHHHHHHHHC-CEEEEcCCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHhc
Confidence 346779999997 7777777753 211 12357889999999999998888866553
No 27
>2dgr_A Ring finger and KH domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.84 E-value=0.28 Score=36.80 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=39.6
Q ss_pred CCeeEecCCccHHHHHHHHHhhCC---CCCeeecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHP---AYPLFVYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
.++||+|.|. .|+++.++++ +.|- .-.||+++++|..+.+.+|-+++.+.+..
T Consensus 21 vG~IIGkgG~----tIk~Iqe~Tga~I~I~~-~~~~~~v~ItG~~e~v~~A~~~I~~~i~~ 76 (83)
T 2dgr_A 21 VGLVVGPKGA----TIKRIQQRTHTYIVTPG-RDKEPVFAVTGMPENVDRAREEIEAHITL 76 (83)
T ss_dssp HHHHHTTTTS----SHHHHHHHTTCEEECCC-SSSCCEEEEEECTTTHHHHHHHHHHHHHS
T ss_pred eeeeECCCch----HHHHHHHHhCCeEEecC-CCCCCeEEEEcCHHHHHHHHHHHHHHHhc
Confidence 4568999998 6777777763 1221 12489999999999999999999886554
No 28
>3krm_A Insulin-like growth factor 2 mRNA-binding protein 1; KH domain, cell projection, cytoplasm, nucleus, phosphoprotein, translation regulation; 2.75A {Homo sapiens}
Probab=80.43 E-value=0.54 Score=37.60 Aligned_cols=55 Identities=20% Similarity=0.270 Sum_probs=39.7
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCCCCCeeecc--------cceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHPAYPLFVYQ--------ERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aYq--------ERvItVSGEyami~aAa~~~l~kia~ 224 (263)
+-++.||+|-|. .|+++++.++ .-+-..+ +|.|+++|..+.+++|.+++.+.+.+
T Consensus 94 ~~~g~iIGkgG~----~I~~i~~~tg-a~I~i~~~~~~~~~~~~~v~I~G~~~~v~~A~~~I~~~i~~ 156 (163)
T 3krm_A 94 SAAGRVIGKGGK----TVNELQNLTA-AEVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQ 156 (163)
T ss_dssp TTHHHHHCGGGH----HHHHHHHHHC-CEEECCTTCCCCTTSEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred hheeeEEcCCCh----HHHHHHHHhC-CeEEECCCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHH
Confidence 446778999997 7888887753 3222222 34899999999999998888666554
No 29
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=79.33 E-value=1.5 Score=31.27 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=35.2
Q ss_pred CeeEecCCccHHHHHHHHHhhCC---CCCeeecccceeeccCchhHHHHHHHHHHH
Q psy15130 168 DFLMVKPALPYLDIISEVKSRHP---AYPLFVYQERCITVSGHFEANEKAMEMILE 220 (263)
Q Consensus 168 D~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYqERvItVSGEyami~aAa~~~l~ 220 (263)
+.||+|.|. .|+++.++++ +.|--.-.||.|+++|..+.+.+|.+.+.+
T Consensus 17 g~iIG~gG~----~I~~I~e~tg~~I~i~~~g~~~~~V~I~G~~~~v~~A~~~I~~ 68 (71)
T 1vig_A 17 RHLIGKSGA----NINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLE 68 (71)
T ss_dssp HHHTCSSCC----HHHHHHHHTCCEEECCCCCSSSEEEEEEESSHHHHHHHHHHHH
T ss_pred hhhcCCCCc----cHHHHHHHHCCEEEECCCCCcccEEEEEcCHHHHHHHHHHHHH
Confidence 458999998 8888888863 123222257899999998888877776643
No 30
>1j4w_A FUSE binding protein; single-stranded DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: d.51.1.1 d.51.1.1
Probab=76.28 E-value=0.67 Score=37.61 Aligned_cols=54 Identities=13% Similarity=0.223 Sum_probs=40.5
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCCee------ecccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYPLF------VYQERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~Pi~------aYqERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|-|. .|+++++.++ .-+- .-.||+|+++|..+.+.+|.+++.+.+.+.
T Consensus 14 vg~iIGkgG~----~Ik~i~~~tg-~~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~~~~~ 73 (174)
T 1j4w_A 14 VGIVIGRNGE----MIKKIQNDAG-VRIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRSV 73 (174)
T ss_dssp HHHHHCGGGH----HHHHHHHHHC-CEEEEECCTTSCSEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCch----HHHHHHHHhC-CEEEEecCCCCCCccEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 4678999997 8888888763 2211 234799999999999999988887666554
No 31
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=76.02 E-value=1.9 Score=33.26 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=38.4
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCC-eeecccceeeccCchhHHHHHHHHHHHhh
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYP-LFVYQERCITVSGHFEANEKAMEMILEKI 222 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~P-i~aYqERvItVSGEyami~aAa~~~l~ki 222 (263)
...||+|-|. .|+++++++++.- -+.-.|+.||+.|..+.+.+|.+.+.+.+
T Consensus 38 h~~IIG~~G~----~Ik~i~~~~~~v~I~fp~~~~~ItI~G~~~~V~~a~~~I~~~v 90 (102)
T 2ctf_A 38 HRFIIGKKGQ----NLAKITQQMPKVHIEFTEGEDKITLEGPTEDVSVAQEQIEGMV 90 (102)
T ss_dssp HHHHHTTTTC----HHHHHHHHCSSSEEEECSSSCEEEEEECHHHHHHHHHHHHHHH
T ss_pred HhhhcCCCCc----cHHHHHHHcCCcEEEeCCCCCEEEEECCHHHHHHHHHHHHHHH
Confidence 4568999998 8888888764332 12225999999999999998888774433
No 32
>2jzx_A Poly(RC)-binding protein 2; PCBP2, KH domains, RNA binding, DNA-binding, nucleus, phosph ribonucleoprotein, RNA-binding, RNA binding protein; NMR {Homo sapiens}
Probab=74.37 E-value=0.29 Score=39.08 Aligned_cols=55 Identities=27% Similarity=0.295 Sum_probs=41.8
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCC---CCeeecccceeeccCchhHHHHHHHHHHHhhccC
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPA---YPLFVYQERCITVSGHFEANEKAMEMILEKIAED 225 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~---~Pi~aYqERvItVSGEyami~aAa~~~l~kia~d 225 (263)
++.||+|.|. .|+++++.++- .+--.-.||+|+++|..+.+.+|...+++.+.++
T Consensus 16 ~g~iIGkgG~----~Ik~i~~~tg~~I~i~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~e~ 73 (160)
T 2jzx_A 16 VGSIIGKKGE----SVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEED 73 (160)
T ss_dssp HHHHHCGGGH----HHHHHHHHHCSEEEEECCTTTEEEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred eeeeECCCcH----HHHHHHHHHCCEEEEcCCCCCceEEEEEeCHHHHHHHHHHHHHHHHhh
Confidence 5678999997 88888887631 1111234899999999999999999998877664
No 33
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=74.03 E-value=15 Score=33.61 Aligned_cols=155 Identities=13% Similarity=0.125 Sum_probs=87.5
Q ss_pred HHHHHHHhH-hhHhhcccccc-----------cCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccc
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ-----------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNE 149 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~-----------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq 149 (263)
+.+-.+.++ |+-|---|-.. +-|.+-+-.||++.|++-++.| .+..|++-.-....
T Consensus 107 ~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ARTDa~~~----------- 174 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR-SDFVLIARTDALQS----------- 174 (307)
T ss_dssp HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEECCHHH-----------
T ss_pred HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCeEEEEechhhhc-----------
Confidence 445556667 77666666431 2244444579999999988777 46788876432211
Q ss_pred cchhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCCCCCeee-ccc----c-----------eeeccCchhHHHH
Q psy15130 150 FHCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHPAYPLFV-YQE----R-----------CITVSGHFEANEK 213 (263)
Q Consensus 150 ~~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~a-YqE----R-----------vItVSGEyami~a 213 (263)
....+.++-...=.+-|||+|.+. |..-.+-++++.+..+..|+.+ .-| + +=-|+.-...+++
T Consensus 175 ~gldeAi~Ra~ay~eAGAD~ifi~-~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 175 LGYEECIERLRAARDEGADVGLLE-GFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp HCHHHHHHHHHHHHHTTCSEEEEC-CCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEec-CCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 113344444555678999999985 7777888899888764467532 110 0 1112222233333
Q ss_pred ---HHHHHHHhhccCCCCCcccccccccccccchHHHhH
Q psy15130 214 ---AMEMILEKIAEDPSSGSCSNVSYALRYGTEGWGELL 249 (263)
Q Consensus 214 ---Aa~~~l~kia~dp~ags~l~iSY~~l~Gp~~~~~~~ 249 (263)
|.+..++.+..+-..+.+-+.++..+..-.|+.|+.
T Consensus 254 a~~a~~~~~~~l~~~g~~~~~~~~~~~el~~~~g~~~~~ 292 (307)
T 3lye_A 254 AYAAIRETLVRLRDHGVVGTPDGITPVRLFEVCGLQDAM 292 (307)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTTCCHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCHHHHHHhcChHHHH
Confidence 344446666655333334455666555555554443
No 34
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=72.53 E-value=4.7 Score=36.10 Aligned_cols=95 Identities=14% Similarity=0.226 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHHHHHhchh-cCCCeeE-ecC--------------
Q psy15130 111 HIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCIAQARDVS-QGADFLM-VKP-------------- 174 (263)
Q Consensus 111 rI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~e~~~Di~-EGAD~Im-VKP-------------- 174 (263)
||...=++|.++| .+.++.|.- .| | |..+.-.++..-+. .|||+|= +-|
T Consensus 6 ri~~~f~~~~~~~--~~ali~yi~---aG--------d--P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a 70 (271)
T 3nav_A 6 RYQALFQRLSAAQ--QGAFVPFVT---IG--------D--PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGA 70 (271)
T ss_dssp HHHHHHHHHHHTT--BCEEEEEEE---TT--------S--SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHH
T ss_pred HHHHHHHHHHhcC--CCeEEEEEe---CC--------C--CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH
Confidence 8887777777776 467787731 11 1 11122234444443 4677742 212
Q ss_pred -------Cc---cHHHHHHHHHhhCCCCCee--ecccceeeccCchhHHHHHHHHHHHh
Q psy15130 175 -------AL---PYLDIISEVKSRHPAYPLF--VYQERCITVSGHFEANEKAMEMILEK 221 (263)
Q Consensus 175 -------g~---~yLDII~~ik~~~~~~Pi~--aYqERvItVSGEyami~aAa~~~l~k 221 (263)
|. .++++++++|+++.+.|++ .|-.. |-.-|.-..++.++++|...
T Consensus 71 ~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~-v~~~g~~~f~~~~~~aGvdG 128 (271)
T 3nav_A 71 NLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANL-VYARGIDDFYQRCQKAGVDS 128 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHH-HHHTCHHHHHHHHHHHTCCE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcH-HHHHhHHHHHHHHHHCCCCE
Confidence 22 4588999999885578954 36422 33457777888888887444
No 35
>2cte_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=68.74 E-value=1.2 Score=33.43 Aligned_cols=54 Identities=22% Similarity=0.201 Sum_probs=38.3
Q ss_pred CCeeEecCCccHHHHHHHHHhhCC---CCCeeecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHP---AYPLFVYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
.+.||+|.|. .|+++.+.++ +.|--.-.++.|+|+|..+.+..|.+++.+.+.+
T Consensus 28 ig~IIG~gG~----~Ik~I~~etg~~I~i~~~~~~~~~V~I~G~~e~v~~A~~~I~~i~~~ 84 (94)
T 2cte_A 28 HRFVIGKNGE----KLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAE 84 (94)
T ss_dssp HHHHHCSSSC----HHHHHHHHTTCCCBCCCTTSSCCEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred eeeeECCCCh----hHHHHHHHHCCEEEeCCCCCCCCeEEEEECHHHHHHHHHHHHHHhhc
Confidence 4668999998 7777777763 2231112368999999999999888888655543
No 36
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=65.93 E-value=31 Score=31.51 Aligned_cols=130 Identities=12% Similarity=0.130 Sum_probs=78.4
Q ss_pred HHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhccccc------
Q psy15130 28 VLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAW------ 100 (263)
Q Consensus 28 ~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm------ 100 (263)
--++.|...-+++-|++|. +.|+-+. +++. +.+-.+.++ |+-|---|-.
T Consensus 69 ~~~~~I~~~~~~~PviaD~---------------d~Gyg~~------~~v~---~tv~~l~~aGaagv~iEDq~~~Krcg 124 (302)
T 3fa4_A 69 ANAEMISNISPSTPVIADA---------------DTGYGGP------IMVA---RTTEQYSRSGVAAFHIEDQVQTKRCG 124 (302)
T ss_dssp HHHHHHHTTSTTSCEEEEC---------------TTTTSSH------HHHH---HHHHHHHHTTCCEEEECSBCCC----
T ss_pred HHHHHHHhhccCCCEEEEC---------------CCCCCCH------HHHH---HHHHHHHHcCCcEEEECCCCCCcccC
Confidence 3456666666777788885 1222110 1222 445556667 7766666643
Q ss_pred -----ccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHHHHHhchhcCCCeeEecCC
Q psy15130 101 -----QTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPA 175 (263)
Q Consensus 101 -----~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg 175 (263)
.+-|.+-+-+||++.|++-++.| .+..|++-.-.... ....+.++-...=.+-|||+|.+ ||
T Consensus 125 h~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ARTDa~~~-----------~gldeAi~Ra~ay~eAGAD~ifi-~g 191 (302)
T 3fa4_A 125 HLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIARTDSLQT-----------HGYEESVARLRAARDAGADVGFL-EG 191 (302)
T ss_dssp ---CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEEEECCHHH-----------HCHHHHHHHHHHHHTTTCSEEEE-TT
T ss_pred CCCCCeecCHHHHHHHHHHHHHHHHhcC-CCEEEEEEeccccc-----------CCHHHHHHHHHHHHHcCCCEEee-cC
Confidence 12244445578999999887766 46788887433221 12334444455556789999998 55
Q ss_pred ccHHHHHHHHHhhCCCCCe
Q psy15130 176 LPYLDIISEVKSRHPAYPL 194 (263)
Q Consensus 176 ~~yLDII~~ik~~~~~~Pi 194 (263)
..-.+-|+++.+..+..|+
T Consensus 192 ~~~~~ei~~~~~~~~~~Pl 210 (302)
T 3fa4_A 192 ITSREMARQVIQDLAGWPL 210 (302)
T ss_dssp CCCHHHHHHHHHHTTTSCE
T ss_pred CCCHHHHHHHHHHhcCCce
Confidence 6667888888887644674
No 37
>2ctm_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=64.58 E-value=4.5 Score=30.63 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=33.1
Q ss_pred CeeEecCCccHHHHHHHHHhhCCCCCeeec-----ccceeeccCchhHHHHHHHHHHH
Q psy15130 168 DFLMVKPALPYLDIISEVKSRHPAYPLFVY-----QERCITVSGHFEANEKAMEMILE 220 (263)
Q Consensus 168 D~ImVKPg~~yLDII~~ik~~~~~~Pi~aY-----qERvItVSGEyami~aAa~~~l~ 220 (263)
..||+|.|. .|+++.+++ +.-+-.. .+|.|+++|..+.+.+|.+++.+
T Consensus 29 g~IIG~gG~----~Ir~I~e~t-g~~I~i~~~g~~~~~~V~I~G~~e~v~~A~~~I~~ 81 (95)
T 2ctm_A 29 ARIIGARGK----AIRKIMDEF-KVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILN 81 (95)
T ss_dssp HHHHCSSSC----HHHHHHHHH-TCEEECCCTTCSCTTEEEEESCHHHHHHHHHHHHH
T ss_pred cccCCCCcc----hHHHHHHHH-CCeEEecCCCCCCCcEEEEEcCHHHHHHHHHHHHH
Confidence 458999998 677776665 2222222 25699999999888887777643
No 38
>2ctl_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=64.54 E-value=4.9 Score=30.46 Aligned_cols=51 Identities=20% Similarity=0.286 Sum_probs=35.0
Q ss_pred CCeeEecCCccHHHHHHHHHhhCC---CCCee---ecccceeeccCchhHHHHHHHHHHHh
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHP---AYPLF---VYQERCITVSGHFEANEKAMEMILEK 221 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~---~~Pi~---aYqERvItVSGEyami~aAa~~~l~k 221 (263)
...||+|.|. .|++|++.++ +.|-- .-.||.|+++|..+.+.+|.+++.+-
T Consensus 28 ig~IIGkgG~----~Ik~I~~etg~~I~i~~~g~~~~~~~~V~I~G~~e~v~~A~~~I~~i 84 (97)
T 2ctl_A 28 HPKIIGRKGA----VITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRI 84 (97)
T ss_dssp HHHHSCSSSC----HHHHHHHHHTCEEECCCTTTCSSCSSEEEEESCHHHHHHHHHHHHHH
T ss_pred hhhcCCCCch----hHHHHHHHHCCEEEecCCCCCCCCccEEEEEeCHHHHHHHHHHHHHH
Confidence 4569999998 7777776652 12211 11468999999988888887777443
No 39
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=64.45 E-value=26 Score=32.25 Aligned_cols=130 Identities=14% Similarity=0.050 Sum_probs=77.2
Q ss_pred HHHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccc----
Q psy15130 27 LVLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQ---- 101 (263)
Q Consensus 27 ~~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~---- 101 (263)
+-.++.|....|++.|++|. +.|+=+ .+++. +.+-.+.++ |+-|---|-..
T Consensus 89 ~~~~~~I~r~~~~~PviaD~---------------d~Gyg~------~~~v~---~tv~~l~~aGaagv~iED~~~~k~c 144 (318)
T 1zlp_A 89 VEATRRITAAAPNLCVVVDG---------------DTGGGG------PLNVQ---RFIRELISAGAKGVFLEDQVWPKKC 144 (318)
T ss_dssp HHHHHHHHHHSSSSEEEEEC---------------TTCSSS------HHHHH---HHHHHHHHTTCCEEEEECBCSSCCC
T ss_pred HHHHHHHHhhccCCCEEEeC---------------CCCCCC------HHHHH---HHHHHHHHcCCcEEEECCCCCCccc
Confidence 34567788888889999995 223111 12222 455566667 77666555431
Q ss_pred -------cCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHHHHHhchhcCCCeeEecC
Q psy15130 102 -------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKP 174 (263)
Q Consensus 102 -------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKP 174 (263)
+-|-+-+-.||+++|++.+.-|| .|++-.-... ...-.+.+...+.=.+-|||+|.+.
T Consensus 145 gH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~---~I~ARtda~a-----------~~gl~~ai~Ra~Ay~eAGAd~i~~e- 209 (318)
T 1zlp_A 145 GHMRGKAVVPAEEHALKIAAAREAIGDSDF---FLVARTDARA-----------PHGLEEGIRRANLYKEAGADATFVE- 209 (318)
T ss_dssp SSSSCCCBCCHHHHHHHHHHHHHHHTTSCC---EEEEEECTHH-----------HHHHHHHHHHHHHHHHTTCSEEEEC-
T ss_pred cCCCCCccCCHHHHHHHHHHHHHhcccCCc---EEEEeeHHhh-----------hcCHHHHHHHHHHHHHcCCCEEEEc-
Confidence 23444556689999988874222 3333211110 0011233444555566899999875
Q ss_pred CccHHHHHHHHHhhCCCCCeee
Q psy15130 175 ALPYLDIISEVKSRHPAYPLFV 196 (263)
Q Consensus 175 g~~yLDII~~ik~~~~~~Pi~a 196 (263)
+.+-.+.++++.+.. ..|+.+
T Consensus 210 ~~~~~e~~~~i~~~l-~~P~la 230 (318)
T 1zlp_A 210 APANVDELKEVSAKT-KGLRIA 230 (318)
T ss_dssp CCCSHHHHHHHHHHS-CSEEEE
T ss_pred CCCCHHHHHHHHHhc-CCCEEE
Confidence 577789999999988 688643
No 40
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=63.79 E-value=8.2 Score=37.32 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=65.1
Q ss_pred HHHHHHHhH-hhHhhcccccc------------cCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc----------
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ------------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ---------- 138 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~------------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss---------- 138 (263)
+.+-.+.+| |--|---|-.. +-|-+-+-.||+++|++.+..|- +..|++-.-...+
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~-d~vIiARTDA~~a~l~~s~~d~r 242 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGT-PTLIVARTDAEAAKLLTSDIDER 242 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEESCCCSTT
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC-CEEEEEEcCCccccccccCcccc
Confidence 455566666 54444444331 12445556799999999988774 6788888443322
Q ss_pred -ccccc------ccccccc-----chhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCC---CCCeeecc
Q psy15130 139 -LNFLK------HVQTNEF-----HCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHP---AYPLFVYQ 198 (263)
Q Consensus 139 -gPFRd------~~~~yq~-----~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYq 198 (263)
.||-. .--.|+. ...+|.++- .+ |||+|.+.|+.+-++-++++.+... ..++.+|+
T Consensus 243 d~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY---~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~ 313 (433)
T 3eol_A 243 DQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAY---AP-YCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYN 313 (433)
T ss_dssp TGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHH---GG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred cccceeccCcccccccccccCCHHHHHHHHHHH---Hh-cCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccC
Confidence 13321 1111222 124443322 24 9999999999877777777766531 13366676
No 41
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=63.63 E-value=6.7 Score=33.49 Aligned_cols=40 Identities=8% Similarity=0.034 Sum_probs=31.9
Q ss_pred HHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeeec
Q psy15130 158 AQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 158 e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~aY 197 (263)
|+..-.+.|||.|.+.|+.+. ++.+++++..+++.|+++-
T Consensus 121 e~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~~ipvvai 162 (214)
T 1wbh_A 121 ELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPT 162 (214)
T ss_dssp HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEB
T ss_pred HHHHHHHCCCCEEEEecCccccCHHHHHHHhhhCCCCeEEEE
Confidence 444556789999999997765 7999999998878887644
No 42
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=63.12 E-value=6.8 Score=33.82 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=31.4
Q ss_pred HHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeeec
Q psy15130 158 AQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 158 e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~aY 197 (263)
|+..-.+.|||.|.+.|+.+. ++.+++++..+++.|+++-
T Consensus 122 e~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~~~~~ipvvai 163 (224)
T 1vhc_A 122 AIEIALEMGISAVKFFPAEASGGVKMIKALLGPYAQLQIMPT 163 (224)
T ss_dssp HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTTTTCEEEEB
T ss_pred HHHHHHHCCCCEEEEeeCccccCHHHHHHHHhhCCCCeEEEE
Confidence 344455789999999997665 7999999998877887644
No 43
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=62.90 E-value=13 Score=36.10 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=66.9
Q ss_pred HHHHHHHhH-hhHhhcccccc------------cCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc------cccc
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ------------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ------LNFL 142 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~------------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss------gPFR 142 (263)
+.+-.+.++ |-.|---|-.. +-|-+-+-.||+++|++.+..|. +..|++-.-...+ ...|
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~-d~~IiARTDa~~a~l~~s~~d~~ 249 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGT-PTVLVARTDAEAADLITSDIDDN 249 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEESCCCCTT
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC-CeEEEEEcCcccccccccccccc
Confidence 455566677 55554444331 23555556799999999998885 6788888443221 2233
Q ss_pred cc------c---ccccc-----chhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCC---CCCeeecc
Q psy15130 143 KH------V---QTNEF-----HCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHP---AYPLFVYQ 198 (263)
Q Consensus 143 d~------~---~~yq~-----~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYq 198 (263)
|+ | -.|.. ...+|.++- .+ |||+|.+.|+.+-++-|+++.+... ..++.+|+
T Consensus 250 d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY---~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~ 318 (439)
T 3i4e_A 250 DKPYLTGERTVEGFFRTKPGLEQAISRGLAY---AP-YADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYN 318 (439)
T ss_dssp TGGGEEEEECTTSCEEECCSHHHHHHHHHHH---TT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cchhhcccCcccccccccCCHHHHHHHHHHH---Hh-hCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeC
Confidence 32 1 11121 124443322 24 9999999999888888888776531 13366676
No 44
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=57.83 E-value=6.8 Score=33.84 Aligned_cols=40 Identities=10% Similarity=-0.047 Sum_probs=31.5
Q ss_pred HHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeeec
Q psy15130 158 AQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 158 e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~aY 197 (263)
|+..-.+.|||.|.+.|+.+. ++.+++++..+++.|+++-
T Consensus 131 e~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~~~~~~ipvvai 172 (225)
T 1mxs_A 131 EIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFCPT 172 (225)
T ss_dssp HHHHHHTTTCCEEEETTHHHHTHHHHHHHHHTTTTTCEEEEB
T ss_pred HHHHHHHCCCCEEEEccCccccCHHHHHHHHhhCCCCeEEEE
Confidence 444555789999999997655 7899999998877887644
No 45
>2ctk_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=56.58 E-value=7.7 Score=29.78 Aligned_cols=50 Identities=16% Similarity=0.206 Sum_probs=35.1
Q ss_pred CeeEecCCccHHHHHHHHHhhCC---CCCeeecccceeeccCchhHHHHHHHHHHHh
Q psy15130 168 DFLMVKPALPYLDIISEVKSRHP---AYPLFVYQERCITVSGHFEANEKAMEMILEK 221 (263)
Q Consensus 168 D~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYqERvItVSGEyami~aAa~~~l~k 221 (263)
..||+|.|. .|+++.+.++ +.|--.-.++.|+++|..+.+.+|-+++.+.
T Consensus 29 g~IIG~gG~----~Ir~I~eetg~~I~I~~~g~~~~~V~I~G~~e~v~~A~~~I~~i 81 (104)
T 2ctk_A 29 RYVIGQKGS----GIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLER 81 (104)
T ss_dssp HHHHCSSSH----HHHHHHHHTCCEEECCCTTTTCCEEEEEECHHHHHHHHHHHHHH
T ss_pred cceeCCCch----HHHHHHHHHCCEEEecCCCCCcceEEEEcCHHHHHHHHHHHHHH
Confidence 458899997 8888888873 1221111346999999998888887777544
No 46
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=56.39 E-value=13 Score=35.97 Aligned_cols=112 Identities=16% Similarity=0.162 Sum_probs=64.9
Q ss_pred HHHHHHHhH-hhHhhcccccc------------cCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc----------
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ------------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ---------- 138 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~------------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss---------- 138 (263)
+.+-.+.++ |--|---|-.. +-|-+-+-+||+++|++.+..|. +..|++-.-...+
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~-d~~IiARTDa~aa~l~~s~~d~r 249 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGV-PTLLIARTDADAADLLTSDCDPY 249 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEESCCCCGG
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC-CeEEEEEcCCccccccccccccc
Confidence 455566677 55554444331 22455556799999999988775 5788887443221
Q ss_pred -ccccc-cc---cccccc-----hhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCC---CCCeeecc
Q psy15130 139 -LNFLK-HV---QTNEFH-----CIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHP---AYPLFVYQ 198 (263)
Q Consensus 139 -gPFRd-~~---~~yq~~-----~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~---~~Pi~aYq 198 (263)
.+|-. .| -.|+.+ ..+|.++- .+ |||+|.+.|+.+-++-++++.+... -.++.+|+
T Consensus 250 D~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY---~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~ 318 (435)
T 3lg3_A 250 DREFITGDRTAEGFFRTRAGIEQAISRGLAY---AP-YADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYN 318 (435)
T ss_dssp GGGGEEEEECTTCCEEECCSHHHHHHHHHHH---GG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cchhhcccccccccccccCCHHHHHHHHHHH---Hc-cCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeC
Confidence 12221 11 122221 24443322 24 9999999999877777777766531 13366676
No 47
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=56.33 E-value=28 Score=33.51 Aligned_cols=91 Identities=19% Similarity=0.261 Sum_probs=57.0
Q ss_pred CCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc-----------ccccccc----cccccc-----hhHHHHHHHhc
Q psy15130 103 RPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ-----------LNFLKHV----QTNEFH-----CIARCIAQARD 162 (263)
Q Consensus 103 ~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss-----------gPFRd~~----~~yq~~-----~~~~~~e~~~D 162 (263)
-|.+-+=.||+++|++.+..|. +..|++-.-.... .||-... ..|... ..+|.++-
T Consensus 201 vp~~e~v~rI~AAr~A~~~~g~-d~vIiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AY--- 276 (429)
T 1f8m_A 201 IPTQQHIRTLTSARLAADVADV-PTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAY--- 276 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC-CCEEEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHH---
T ss_pred eCHHHHHHHHHHHHHHHHhcCC-CEEEEEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHH---
Confidence 3555556799999999998885 6788888443221 2343211 112211 24443222
Q ss_pred hhcCCCeeEecCCccHHHHHHHHHhhCCC-CC--eeecc
Q psy15130 163 VSQGADFLMVKPALPYLDIISEVKSRHPA-YP--LFVYQ 198 (263)
Q Consensus 163 i~EGAD~ImVKPg~~yLDII~~ik~~~~~-~P--i~aYq 198 (263)
. +|||+|.+.++.+-++-++++.+.... .| +.+|+
T Consensus 277 a-~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n 314 (429)
T 1f8m_A 277 A-PFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYN 314 (429)
T ss_dssp G-GGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred H-hcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecC
Confidence 3 499999999888888888888776521 35 56676
No 48
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=56.22 E-value=49 Score=29.10 Aligned_cols=114 Identities=6% Similarity=-0.048 Sum_probs=71.4
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.+++-..
T Consensus 13 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---- 78 (292)
T 2ojp_A 13 MDEKGNVC------RASLK---KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGTG---- 78 (292)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC----
Confidence 35678888 34444 555556667 887777666555566677789998988887754 3566665432
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.-.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 79 ----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn 134 (292)
T 2ojp_A 79 ----------ANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT-DLPQILYN 134 (292)
T ss_dssp ----------CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEEEC
T ss_pred ----------CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 11223443333333446999988855321 244556666666 79999998
No 49
>2e3u_A PH-DIM2P, hypothetical protein PH1566; PRE-ribosomal RNA processing factor, RNA binding protein; 2.30A {Pyrococcus horikoshii} PDB: 3aev_B
Probab=56.09 E-value=4 Score=35.65 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=43.9
Q ss_pred CeeEecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHHhhccCCCC
Q psy15130 168 DFLMVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILEKIAEDPSS 228 (263)
Q Consensus 168 D~ImVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~kia~dp~a 228 (263)
+.||+|-|. .++.+.+.+ ..-+..+ ++.|++.|.|..++.|-.++.+.+...||.
T Consensus 141 GriIGk~G~----tik~ie~~T-g~~I~v~-~~~v~i~G~~~~i~~A~~~i~~li~g~~~~ 195 (219)
T 2e3u_A 141 GRIIGRKGR----TRQIIEEMS-GASVSVY-GKTVAIIGNPIQIEIAKTAIEKLARGSPHG 195 (219)
T ss_dssp HHHHCGGGH----HHHHHHHHH-CCEEEEE-TTEEEEEECHHHHHHHHHHHHHHHTTCCHH
T ss_pred heeECCCch----HHHHHHHHh-CceEEEC-CeEEEEEeCHHHHHHHHHHHHHHHcCCCcH
Confidence 459999997 888888887 4555544 588999999999999888888888666654
No 50
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=55.89 E-value=12 Score=31.56 Aligned_cols=40 Identities=18% Similarity=0.308 Sum_probs=30.8
Q ss_pred HHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeeec
Q psy15130 158 AQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 158 e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~aY 197 (263)
|+..-.+.|||.|.+.|+... ++.+++++..+++.|+++-
T Consensus 116 e~~~A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~~ipvvai 157 (207)
T 2yw3_A 116 EVERALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFLPT 157 (207)
T ss_dssp HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEEEB
T ss_pred HHHHHHHCCCCEEEEecCccccCHHHHHHHHhhCCCCcEEEe
Confidence 444445679999999997654 6889999998877887754
No 51
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=50.62 E-value=15 Score=32.37 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=33.6
Q ss_pred HHHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeeec
Q psy15130 157 IAQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 157 ~e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~aY 197 (263)
.|+..=++-|||+|-..|+... ++.|++++..+++.|+++-
T Consensus 138 tEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~pt 180 (232)
T 4e38_A 138 STVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLMPT 180 (232)
T ss_dssp HHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEEEB
T ss_pred HHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCeeeE
Confidence 4556667899999999998876 7999999998878886643
No 52
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=50.28 E-value=81 Score=27.95 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=70.0
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 29 ~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg----- 93 (304)
T 3cpr_A 29 TESGDID------IAAGR---EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVG----- 93 (304)
T ss_dssp CTTSCBC------HHHHH---HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECC-----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCC-----
Confidence 5678887 34444 455556666 777776666555566677788888888887654 3566665422
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 94 ---------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn 149 (304)
T 3cpr_A 94 ---------TNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT-EVPICLYD 149 (304)
T ss_dssp ---------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 12223332223333346999988855321 245556777776 79999998
No 53
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=50.16 E-value=33 Score=25.23 Aligned_cols=49 Identities=12% Similarity=0.176 Sum_probs=34.1
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMIL 219 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l 219 (263)
..|+|++- |+..-+++++++++..+..|++.+. -..+......+.+.|.
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g~ 102 (153)
T 3cz5_A 51 TPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFT-----MHQGSAFALKAFEAGA 102 (153)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEE-----SCCSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEE-----CCCCHHHHHHHHHCCC
Confidence 47888874 6667789999999987777866544 4445555565666553
No 54
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=49.82 E-value=71 Score=28.28 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=68.7
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.+++-...
T Consensus 25 ~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg~---- 90 (301)
T 1xky_A 25 DINGNID------FAKTT---KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTGS---- 90 (301)
T ss_dssp CTTSSBC------HHHHH---HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCC----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCCC----
Confidence 5678887 34434 555556667 777776665544566666778888888887754 35666654221
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++-|=.. ..+-.+++.+.. ++|++-|+
T Consensus 91 ----------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 145 (301)
T 1xky_A 91 ----------NNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST-PLPVMLYN 145 (301)
T ss_dssp ----------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC-SSCEEEEE
T ss_pred ----------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222333346999988854321 244556677766 79999998
No 55
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=49.44 E-value=56 Score=29.75 Aligned_cols=113 Identities=9% Similarity=0.044 Sum_probs=69.6
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 44 ~~dg~ID------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg----- 108 (343)
T 2v9d_A 44 TADGQLD------KPGTA---ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGTG----- 108 (343)
T ss_dssp CTTSSBC------HHHHH---HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC-----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC-----
Confidence 5678888 34444 455556667 787776665545566666788888888887654 3566665422
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.-.+-|||.+++-|=.. ..+-.+++.+.. ++|++-|+
T Consensus 109 ---------~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiilYn 164 (343)
T 2v9d_A 109 ---------GTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV-TLPVMLYN 164 (343)
T ss_dssp ---------SSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC-SSCEEEEE
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 11223332222233346999988855321 245556777766 79999998
No 56
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=48.21 E-value=28 Score=30.89 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=28.2
Q ss_pred cHHHHHHHHHhhCCCCCeee--cccceeeccCchhHHHHHHHHHHHh
Q psy15130 177 PYLDIISEVKSRHPAYPLFV--YQERCITVSGHFEANEKAMEMILEK 221 (263)
Q Consensus 177 ~yLDII~~ik~~~~~~Pi~a--YqERvItVSGEyami~aAa~~~l~k 221 (263)
.++++++++|++..+.|++. |-. .|-.-|.-..++.++++|...
T Consensus 81 ~~~~~v~~ir~~~~~~Pivlm~Y~n-pv~~~g~e~f~~~~~~aGvdg 126 (267)
T 3vnd_A 81 DCFDIITKVRAQHPDMPIGLLLYAN-LVFANGIDEFYTKAQAAGVDS 126 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECHH-HHHHHCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCc-HHHHhhHHHHHHHHHHcCCCE
Confidence 45899999998744789443 421 233346666777777777444
No 57
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=48.11 E-value=77 Score=28.62 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=70.3
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 47 ~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg~---- 112 (332)
T 2r8w_A 47 DEAGRVD------IEAFS---ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIGA---- 112 (332)
T ss_dssp CTTCCBC------HHHHH---HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEECC----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCC----
Confidence 5678887 34444 455556667 787776665555566666788888888887765 35677664221
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.-.+-|||.+++-|=.. ..+-.+++.+.. ++|++-|+
T Consensus 113 ----------~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiilYn 167 (332)
T 2r8w_A 113 ----------LRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT-ALPLAIYN 167 (332)
T ss_dssp ----------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEC
T ss_pred ----------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222333346999988855321 345556777777 79999998
No 58
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=48.05 E-value=70 Score=28.56 Aligned_cols=112 Identities=10% Similarity=0.009 Sum_probs=71.8
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...||...+..+ .++.++.-...
T Consensus 25 ~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg~---- 90 (314)
T 3d0c_A 25 EGTREID------WKGLD---DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGIGY---- 90 (314)
T ss_dssp TTTCCBC------HHHHH---HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEECS----
T ss_pred CCCCCCC------HHHHH---HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecCCc----
Confidence 5678888 34444 555556667 887777666555567777889999998887765 36777765321
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
+-.+.+..++.-.+-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 91 -----------st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 144 (314)
T 3d0c_A 91 -----------SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL-DAPSIIYF 144 (314)
T ss_dssp -----------SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS-SSCEEEEE
T ss_pred -----------CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 122332223333346999988855321 345556777777 69999999
No 59
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=46.27 E-value=35 Score=24.56 Aligned_cols=49 Identities=22% Similarity=0.382 Sum_probs=33.6
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 99 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILT-----GHGDLDNAILAMKEG 99 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEE-----CTTCHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEE-----CCCCHHHHHHHHHhC
Confidence 467888876 6777889999999987777766443 444445555555444
No 60
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=45.88 E-value=80 Score=27.70 Aligned_cols=114 Identities=11% Similarity=0.043 Sum_probs=72.7
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-...
T Consensus 13 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~--- 79 (291)
T 3tak_A 13 MLKDGGVD------WKSLE---KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAGTGA--- 79 (291)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCC---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCC---
Confidence 45678888 34444 445455667 887777776666677777889999988888765 35677664221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++=|=.. ..+..+++.+.. +.|++-|+
T Consensus 80 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn 134 (291)
T 3tak_A 80 -----------NSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV-ELPLILYN 134 (291)
T ss_dssp -----------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred -----------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1222332222333346999988765321 345566777777 79999998
No 61
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.33 E-value=25 Score=24.96 Aligned_cols=50 Identities=16% Similarity=0.372 Sum_probs=31.6
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMIL 219 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l 219 (263)
...|+|++- |+..-+++++++++..++.|++.+- -..+......+.+.|.
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t-----~~~~~~~~~~~~~~g~ 102 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS-----ATENMADIAKALRLGV 102 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE-----CCCCHHHHHHHHHHCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE-----cCCCHHHHHHHHHcCC
Confidence 347888876 6667789999999987677766543 4445555565665553
No 62
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.87 E-value=83 Score=28.00 Aligned_cols=114 Identities=9% Similarity=0.012 Sum_probs=70.1
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+.. .++.++.-..
T Consensus 20 f~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg---- 84 (313)
T 3dz1_A 20 FHDDGKID------DVSID---RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVS---- 84 (313)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecC----
Confidence 35678888 34444 455556667 78776666555556667788899999888877 4788876532
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc------HHHHHHHHHhhCC-CCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP------YLDIISEVKSRHP-AYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~------yLDII~~ik~~~~-~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++-|-.. ..+-.+++.+..+ +.|++-|+
T Consensus 85 ----------~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 85 ----------APGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp ----------CSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 11223332222222336999988865431 1344556666652 39999997
No 63
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=43.41 E-value=69 Score=28.41 Aligned_cols=114 Identities=11% Similarity=0.060 Sum_probs=70.4
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 23 F~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg~--- 89 (303)
T 2wkj_A 23 FDQQQALD------KASLR---RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVGC--- 89 (303)
T ss_dssp BCTTSSBC------HHHHH---HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECCC---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCC---
Confidence 35678887 34444 455556667 887777666555566677889998988887765 36677764221
Q ss_pred ccccccccccccchhHHHHHHHhch-hcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDV-SQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di-~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+. .|..+.. +-|||.+++-|=.. ..+-.+++.+..+++|++-|+
T Consensus 90 -----------~~t~~a-i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 90 -----------VSTAES-QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp -----------SSHHHH-HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -----------CCHHHH-HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 122333 2333333 36999988754321 244556666666339999998
No 64
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=42.87 E-value=36 Score=24.39 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=32.5
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCC-CCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHP-AYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~-~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|+ -|+..-+++++++++. + ..|++.+. -..+......+.+.+
T Consensus 61 ~~~dlvi-~~~~~g~~~~~~l~~~-~~~~~ii~ls-----~~~~~~~~~~~~~~g 108 (137)
T 2pln_A 61 RNYDLVM-VSDKNALSFVSRIKEK-HSSIVVLVSS-----DNPTSEEEVHAFEQG 108 (137)
T ss_dssp SCCSEEE-ECSTTHHHHHHHHHHH-STTSEEEEEE-----SSCCHHHHHHHHHTT
T ss_pred CCCCEEE-EcCccHHHHHHHHHhc-CCCccEEEEe-----CCCCHHHHHHHHHcC
Confidence 4579999 8888889999999998 6 67766544 334444444444443
No 65
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=42.66 E-value=35 Score=25.02 Aligned_cols=49 Identities=10% Similarity=0.112 Sum_probs=34.2
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. -..+...+..+.+.|
T Consensus 60 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 111 (152)
T 3eul_A 60 HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLIS-----AHDEPAIVYQALQQG 111 (152)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEE-----SCCCHHHHHHHHHTT
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEE-----ccCCHHHHHHHHHcC
Confidence 457888875 7788899999999987667766444 444555555555554
No 66
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=42.49 E-value=57 Score=23.88 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=32.1
Q ss_pred CCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 167 ADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 167 AD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
-|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.+
T Consensus 49 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 98 (151)
T 3kcn_A 49 FSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLT-----GNQDLTTAMEAVNEG 98 (151)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEE-----CGGGHHHHHHHHHHT
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEE-----CCCCHHHHHHHHHcC
Confidence 4888875 7778899999999987777765443 334445555555554
No 67
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=42.03 E-value=79 Score=27.85 Aligned_cols=115 Identities=12% Similarity=0.020 Sum_probs=70.4
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 15 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~--- 81 (294)
T 3b4u_A 15 FKTDGTVD------IDAMI---AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGVLV--- 81 (294)
T ss_dssp BCTTSSBC------HHHHH---HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEECC---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCC---
Confidence 35678888 34444 555556667 887776665544566666788888888887765 35666654221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc--------HHHHHHHHHhhCC--CCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP--------YLDIISEVKSRHP--AYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~--------yLDII~~ik~~~~--~~Pi~aYq 198 (263)
.+-.+.+..++.-.+-|||.+++=|=.. ..+-.+++.+..+ +.|++-|+
T Consensus 82 -----------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 82 -----------DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp -----------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred -----------ccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 1223332223333347999988865332 2344456666654 79999998
No 68
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=41.62 E-value=1e+02 Score=27.02 Aligned_cols=112 Identities=9% Similarity=0.084 Sum_probs=68.7
Q ss_pred CCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccccc
Q psy15130 62 KSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLN 140 (263)
Q Consensus 62 ~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgP 140 (263)
+||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.+++-...
T Consensus 14 ~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~----- 78 (292)
T 2vc6_A 14 ADDRID------EVALH---DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAGAGS----- 78 (292)
T ss_dssp ETTEEC------HHHHH---HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCC-----
T ss_pred CCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecCC-----
Confidence 578887 34444 455555666 777777666555566677788888888887654 35666654221
Q ss_pred ccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 141 FLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 141 FRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.-.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 79 ---------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn 133 (292)
T 2vc6_A 79 ---------NSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS-TIPIIVYN 133 (292)
T ss_dssp ---------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ---------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 1123332223333447999988855321 234445777777 79999998
No 69
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=41.33 E-value=32 Score=24.78 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=33.4
Q ss_pred cCCCeeEec--CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK--PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK--Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 47 ~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls-----~~~~~~~~~~~~~~g 97 (142)
T 2qxy_A 47 EKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLS-----AYVDKDLIINSVKAG 97 (142)
T ss_dssp SCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEE-----SCCCHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEE-----CCCCHHHHHHHHHCC
Confidence 357888875 6667789999999987677866544 344455555555554
No 70
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.69 E-value=1.1e+02 Score=26.94 Aligned_cols=114 Identities=9% Similarity=0.079 Sum_probs=70.9
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-...
T Consensus 19 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~--- 85 (297)
T 3flu_A 19 MNQDGSIH------YEQLR---DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGTGA--- 85 (297)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCC---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeCCC---
Confidence 35678887 34444 444455666 887776666655566677888888888887765 35677764221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++=|=.. ..+-.+++.+.. ++|++-|+
T Consensus 86 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 140 (297)
T 3flu_A 86 -----------NNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT-SIPMIIYN 140 (297)
T ss_dssp -----------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred -----------cCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 1223332222333347999988765221 345566777777 79999998
No 71
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=40.46 E-value=90 Score=27.57 Aligned_cols=112 Identities=11% Similarity=0.082 Sum_probs=69.3
Q ss_pred CCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccccc
Q psy15130 62 KSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLN 140 (263)
Q Consensus 62 ~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgP 140 (263)
+||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.+++-...
T Consensus 14 ~dg~iD------~~~l~---~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~----- 78 (297)
T 2rfg_A 14 INGQVD------EKALA---GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAGAGS----- 78 (297)
T ss_dssp ETTEEC------HHHHH---HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECCC-----
T ss_pred CCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEccCC-----
Confidence 578887 34444 455555667 787777666555566677788888888887654 25666654221
Q ss_pred ccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 141 FLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 141 FRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+|+-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 79 ---------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 133 (297)
T 2rfg_A 79 ---------NNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI-DIPIIVYN 133 (297)
T ss_dssp ---------SSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ---------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222222346999998865322 245556777776 79999998
No 72
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=39.40 E-value=85 Score=28.09 Aligned_cols=113 Identities=10% Similarity=0.037 Sum_probs=69.8
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 37 ~~dg~iD------~~~l~---~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg----- 101 (315)
T 3na8_A 37 AADGGLD------LPALG---RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA-HRVPTIVSVS----- 101 (315)
T ss_dssp CTTSSBC------HHHHH---HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC-----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC-----
Confidence 3678888 34444 445555667 887776666555566677888888888887754 3466665421
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.-.+-|||.+++=|=.. ..+..+++.+.. +.|++-|+
T Consensus 102 ---------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 157 (315)
T 3na8_A 102 ---------DLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI-GVPVMLYN 157 (315)
T ss_dssp ---------CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCcEEEEe
Confidence 11223332323333347999988865321 345566677777 69999998
No 73
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=39.38 E-value=88 Score=27.47 Aligned_cols=112 Identities=8% Similarity=0.062 Sum_probs=68.3
Q ss_pred eCCCcccccccccccchhchHHHHHHHHh-H-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSR-Y-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~-A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
++||.|| .+.+. +.+--+.+ + .|-+-+...---.|+=..+=|...+|...+..+ .++.+++-...
T Consensus 16 ~~dg~iD------~~~l~---~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~--- 82 (293)
T 1f6k_A 16 NEDGTIN------EKGLR---QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVGS--- 82 (293)
T ss_dssp CTTSCBC------HHHHH---HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECCC---
T ss_pred CCCCCcC------HHHHH---HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecCC---
Confidence 5678887 34444 45555666 7 777766665544566666778888888887655 36677655321
Q ss_pred ccccccccccccchhHHHHHHHhch-hcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDV-SQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di-~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+. .|..+.. +-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 83 -----------~~t~~a-i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 137 (293)
T 1f6k_A 83 -----------VNLKEA-VELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET-GSNMIVYS 137 (293)
T ss_dssp -----------SCHHHH-HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred -----------CCHHHH-HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 122333 2223333 36999988854321 244556666666 68999998
No 74
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=39.23 E-value=58 Score=22.73 Aligned_cols=48 Identities=13% Similarity=0.334 Sum_probs=32.0
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..+..|++... -.++......+.+.|
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 97 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMT-----AYGELDMIQESKELG 97 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEE-----SSCCHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEE-----ccCchHHHHHHHhcC
Confidence 47888764 7777889999999887667765433 444555555555544
No 75
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=39.08 E-value=36 Score=24.31 Aligned_cols=49 Identities=18% Similarity=0.263 Sum_probs=33.1
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..+..|++.+. -..+......+.+.|
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 101 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVIS-----AFSEMKYFIKAIELG 101 (137)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECC-----CCCCHHHHHHHHHHC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEe-----cCcChHHHHHHHhCC
Confidence 347888886 6777889999999987667765443 334445555555554
No 76
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=38.91 E-value=45 Score=23.11 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=31.6
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..++.|++... -.++......+.+.|
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 97 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS-----AMGQQAMVIEAIKAG 97 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE-----CTTCHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe-----CCCCHHHHHHHHHhC
Confidence 46888765 5666789999999887677766443 445555555444443
No 77
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=38.61 E-value=1.4e+02 Score=26.21 Aligned_cols=113 Identities=14% Similarity=0.081 Sum_probs=67.1
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
++ ||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 13 f~-dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---- 77 (294)
T 2ehh_A 13 FK-EGEVD------YEALG---NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAGTG---- 77 (294)
T ss_dssp EE-TTEEC------HHHHH---HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC----
T ss_pred cC-CCCcC------HHHHH---HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC----
Confidence 35 77787 24433 445555666 777766655444456666778888888777654 2566665422
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.-.+-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 78 ----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 133 (294)
T 2ehh_A 78 ----------GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV-DIPIIIYN 133 (294)
T ss_dssp ----------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 11223332333333446999988855321 244556677776 79999998
No 78
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=38.25 E-value=1.3e+02 Score=26.58 Aligned_cols=114 Identities=13% Similarity=0.130 Sum_probs=68.7
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ .|-+-+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 26 f~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---- 91 (307)
T 3s5o_A 26 FTATAEVD------YGKLE---ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-KNRLLLAGSG---- 91 (307)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-TTSEEEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-CCCcEEEecC----
Confidence 35678887 34434 444455666 776665555444466666888888888887765 4566665422
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc---------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP---------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~---------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 92 ----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~-~lPiilYn 149 (307)
T 3s5o_A 92 ----------CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS-PIPVVLYS 149 (307)
T ss_dssp ----------CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc-CCCEEEEe
Confidence 11223332222233347999999854332 233456666666 79999998
No 79
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=38.19 E-value=1.5e+02 Score=26.34 Aligned_cols=116 Identities=10% Similarity=0.076 Sum_probs=69.6
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ .|-+-+...---.|+=..+=|...+|...+..+ .++.++.-..
T Consensus 20 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---- 85 (309)
T 3fkr_A 20 FADTGDLD------LASQK---RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTS---- 85 (309)
T ss_dssp BCTTSSBC------HHHHH---HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----
T ss_pred CCcCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecC----
Confidence 35678888 34544 444455566 777766655555566666778888888877654 3566665422
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc----------HHHHHHHHHhhCCCCCeeecccc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP----------YLDIISEVKSRHPAYPLFVYQER 200 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~----------yLDII~~ik~~~~~~Pi~aYqER 200 (263)
..+-.+.+..++.=.+-|||.+++=|--. ..+-.+++.+.. +.|++-|+-+
T Consensus 86 ----------~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~-~lPiilYn~P 146 (309)
T 3fkr_A 86 ----------HYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAI-AIPIMVQDAP 146 (309)
T ss_dssp ----------CSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHC-SSCEEEEECG
T ss_pred ----------CchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence 11223332222233346999998866321 134456666666 7999999844
No 80
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.82 E-value=1e+02 Score=27.17 Aligned_cols=114 Identities=7% Similarity=-0.012 Sum_probs=70.7
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 16 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg~--- 82 (300)
T 3eb2_A 16 VDAEGRVR------ADVMG---RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-RRVPVVAGVAS--- 82 (300)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCBEEEEEE---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCCC---
Confidence 35678888 34444 445555667 887777666655677777889999988888765 35666654221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++=|=.. ..+-.+++.+.. ++|++-|+
T Consensus 83 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 137 (300)
T 3eb2_A 83 -----------TSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAV-EIPVVIYT 137 (300)
T ss_dssp -----------SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred -----------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEE
Confidence 1122332222222336999988865321 344566677777 69999998
No 81
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=37.79 E-value=27 Score=31.52 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=56.0
Q ss_pred HHHHHHHhH-hhHhhccccc-------------ccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccc
Q psy15130 82 QLVMAYSRY-IICIALHDAW-------------QTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQT 147 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm-------------~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~ 147 (263)
+.+-.+.++ |+-|---|-. .+-|-+-+-.||+++|++-+. .+..|++-.-....+
T Consensus 98 ~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~---~~~~i~aRtda~~a~-------- 166 (295)
T 1s2w_A 98 RLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTD---PDFCIVARVEAFIAG-------- 166 (295)
T ss_dssp HHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSS---TTCEEEEEECTTTTT--------
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhccc---CCcEEEEeehHHhcc--------
Confidence 455666677 7777666543 112333344566666665532 222333332111010
Q ss_pred cccchhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCC-CCCee
Q psy15130 148 NEFHCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHP-AYPLF 195 (263)
Q Consensus 148 yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~-~~Pi~ 195 (263)
..-.+.+.....=.+-|||+|.+.++.+-.+.++++.+..+ ..|++
T Consensus 167 --~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i 213 (295)
T 1s2w_A 167 --WGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVV 213 (295)
T ss_dssp --CCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEE
T ss_pred --ccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEE
Confidence 01233344455556789999999887776788888888752 27854
No 82
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=37.55 E-value=1.2e+02 Score=26.50 Aligned_cols=113 Identities=10% Similarity=0.057 Sum_probs=68.5
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
++ ||.|| .+.+. +.+--+.++ .|-+-+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 13 f~-dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg~--- 78 (289)
T 2yxg_A 13 FK-NKEVD------FDGLE---ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAGAGS--- 78 (289)
T ss_dssp EE-TTEEC------HHHHH---HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECCC---
T ss_pred cC-CCCcC------HHHHH---HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCC---
Confidence 35 78887 34444 455555666 777776665555566666778888888887654 25666654221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 79 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn 133 (289)
T 2yxg_A 79 -----------NCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI-NLPIVLYN 133 (289)
T ss_dssp -----------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred -----------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222233346999988855321 245556777776 79999998
No 83
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=37.46 E-value=1.2e+02 Score=26.84 Aligned_cols=113 Identities=11% Similarity=0.050 Sum_probs=69.1
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
++ ||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|...+..+ .++.+++-...
T Consensus 25 f~-dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg~--- 90 (306)
T 1o5k_A 25 FK-NGELD------LESYE---RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGAGT--- 90 (306)
T ss_dssp EE-TTEEC------HHHHH---HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECCC---
T ss_pred cC-CCCcC------HHHHH---HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcCCC---
Confidence 46 78887 34444 455556667 787776666555566666788888888887755 35666654321
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 91 -----------~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 145 (306)
T 1o5k_A 91 -----------NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT-DLGIVVYN 145 (306)
T ss_dssp -----------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEEEE
T ss_pred -----------ccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 1223332222223346999988854321 244556666666 79999998
No 84
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=37.08 E-value=27 Score=30.83 Aligned_cols=37 Identities=35% Similarity=0.683 Sum_probs=26.6
Q ss_pred HHHHhchhcCCCeeEecCCccH---------------------------HHHHHHHHhhCCCCCeee
Q psy15130 157 IAQARDVSQGADFLMVKPALPY---------------------------LDIISEVKSRHPAYPLFV 196 (263)
Q Consensus 157 ~e~~~Di~EGAD~ImVKPg~~y---------------------------LDII~~ik~~~~~~Pi~a 196 (263)
.+...-+.++||+|.+ |.|| +++++++|++. +.|++.
T Consensus 33 ~~~~~~l~~~aD~IEl--G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~-~~Pii~ 96 (271)
T 1ujp_A 33 LQAVEEVLPYADLLEI--GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-EKPLFL 96 (271)
T ss_dssp HHHHHHHGGGCSSEEE--ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-CSCEEE
T ss_pred HHHHHHHHhcCCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEE
Confidence 4445556666999877 5444 58899999984 899666
No 85
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=37.00 E-value=1.6e+02 Score=26.20 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=70.5
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-...
T Consensus 36 ~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg~---- 101 (314)
T 3qze_A 36 DAQGRLD------WDSLA---KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGTGA---- 101 (314)
T ss_dssp CTTSCBC------HHHHH---HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECCC----
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCC----
Confidence 4577887 34444 444455667 887776666655677777888888888888765 35677664221
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+|+=|=.. ..+-.+++.+.. ++|++-|+
T Consensus 102 ----------~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 156 (314)
T 3qze_A 102 ----------NSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV-AIPQILYN 156 (314)
T ss_dssp ----------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS-CSCEEEEE
T ss_pred ----------cCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222222337999988865321 345566777777 79999998
No 86
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=36.52 E-value=48 Score=26.10 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=33.9
Q ss_pred cCCCeeEecCCccHHHHHHHHHhhCC-CCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVKPALPYLDIISEVKSRHP-AYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVKPg~~yLDII~~ik~~~~-~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|+ -|+..-+++++++++. + +.|++.+. -..+......|.+.|
T Consensus 43 ~~~dlvi-lp~~~g~~~~~~lr~~-~~~~~ii~lt-----~~~~~~~~~~~~~~G 90 (223)
T 2hqr_A 43 RNYDLVM-VSDKNALSFVSRIKEK-HSSIVVLVSS-----DNPTSEEEVHAFEQG 90 (223)
T ss_dssp SCCSEEE-ECCTTHHHHHHHHHHH-CTTSEEEEEE-----SSCCHHHHHHHHHHT
T ss_pred CCCCEEE-eCCCCHHHHHHHHHhC-CCCCcEEEEE-----CCCCHHHHHHHHHcC
Confidence 3579988 8999999999999998 5 77866554 444455555555555
No 87
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.44 E-value=1.3e+02 Score=26.77 Aligned_cols=114 Identities=12% Similarity=0.152 Sum_probs=70.4
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 27 f~~dg~iD------~~~l~---~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg~--- 93 (304)
T 3l21_A 27 FSGDGSLD------TATAA---RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAGT--- 93 (304)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECCC---
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCCC---
Confidence 35678887 34444 455555666 777666665555566677888888888887765 35677765321
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCc-------cHHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPAL-------PYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~-------~yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++=|=. -..+..+++.+.. ++|++-|+
T Consensus 94 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 148 (304)
T 3l21_A 94 -----------YDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT-ELPMLLYD 148 (304)
T ss_dssp -----------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC-SSCEEEEE
T ss_pred -----------CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 112233222222233699998887632 1344566777776 79999998
No 88
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=36.35 E-value=83 Score=23.03 Aligned_cols=49 Identities=10% Similarity=0.200 Sum_probs=33.4
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.+
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 108 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLT-----GDPDLKLIAKAINEG 108 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEC-----CCCCHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEE-----CCCCHHHHHHHHhCC
Confidence 347888875 7777899999999987777766444 444555555554443
No 89
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=36.28 E-value=53 Score=23.53 Aligned_cols=48 Identities=15% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..=+++++++++..++.|++.+. -..+......+.+.|
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 99 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVT-----TFKRPGYFEKAVVND 99 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEe-----cCCCHHHHHHHHHcC
Confidence 46888765 6777789999999876667766443 444545555554443
No 90
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=35.44 E-value=1.8e+02 Score=25.85 Aligned_cols=113 Identities=12% Similarity=0.093 Sum_probs=71.6
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.||. +.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-...
T Consensus 19 f~~dg~iD~------~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpViaGvg~--- 85 (311)
T 3h5d_A 19 FHEDGSINF------DAIP---ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-GRVPLIAGVGT--- 85 (311)
T ss_dssp BCTTSSBCT------THHH---HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-SSSCEEEECCC---
T ss_pred CCCCCCcCH------HHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCC---
Confidence 356788873 4444 444455667 887776666655667777889999988888765 35677665221
Q ss_pred ccccccccccccchhHHHHHHHhchhc-CC-CeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQ-GA-DFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~E-GA-D~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+. .|..+..++ || |.+|+=|-.. ..+-.+++.+.. +.|++-|+
T Consensus 86 -----------~~t~~a-i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 141 (311)
T 3h5d_A 86 -----------NDTRDS-IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS-DLPIIIYN 141 (311)
T ss_dssp -----------SSHHHH-HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC-SSCEEEEE
T ss_pred -----------cCHHHH-HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 122233 344455554 86 9887765321 345566666766 79999998
No 91
>2qnd_A FMR1 protein; KH domain, eukaryotic KH domains, tandem KH domains, type I domains, fragIle X mental retardation protein, RNA BI protein; 1.90A {Homo sapiens} PDB: 2fmr_A
Probab=35.43 E-value=13 Score=29.74 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=36.5
Q ss_pred CCeeEecCCccHHHHHHHHHhhCCCCC--eee------c-ccc--eeeccCchhHHHHHHHHHHHhhc
Q psy15130 167 ADFLMVKPALPYLDIISEVKSRHPAYP--LFV------Y-QER--CITVSGHFEANEKAMEMILEKIA 223 (263)
Q Consensus 167 AD~ImVKPg~~yLDII~~ik~~~~~~P--i~a------Y-qER--vItVSGEyami~aAa~~~l~kia 223 (263)
.+.+|+|-|. .|+++.+.++-.- +.. . .|+ .||+.|....+..|-+++.+.+.
T Consensus 78 ~g~~IGK~G~----nIr~i~~~tG~~~I~i~~~~~~~~~~~~~~~~vtI~G~~~~v~~Ak~li~~~l~ 141 (144)
T 2qnd_A 78 VGKVIGKNGK----LIQEIVDKSGVVRVRIEAENEKNVPQEEGMVPFVFVGTKDSIANATVLLDYHLN 141 (144)
T ss_dssp HHHHHCGGGH----HHHHHHHHHTCSEEEEEEECTTCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred cCeeECCCCH----HHHHHHHHHCCEEEEEcCCCCCCccccCCeeEEEEEeCHHHHHHHHHHHHHHHH
Confidence 4557888897 7888887764211 110 1 133 48999999999999888877664
No 92
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=35.30 E-value=42 Score=24.18 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=30.2
Q ss_pred CCeeEec---CC--ccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 167 ADFLMVK---PA--LPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 167 AD~ImVK---Pg--~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
-|+|++- |+ ..-+++++++++..++.|++... -..+......+.+.|
T Consensus 51 ~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 102 (136)
T 3kto_A 51 AIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMA-----SSSDIPTAVRAMRAS 102 (136)
T ss_dssp EEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEE-----SSCCHHHHHHHHHTT
T ss_pred CCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEE-----cCCCHHHHHHHHHcC
Confidence 5777765 55 66689999999987677766443 444455555454443
No 93
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.29 E-value=1.6e+02 Score=26.36 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=70.0
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-..
T Consensus 34 f~~dg~iD------~~~l~---~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg---- 99 (315)
T 3si9_A 34 FDDNGAID------EKAFC---NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-KRVPVVAGAG---- 99 (315)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCC----
Confidence 35678887 34444 444455566 777776666555566667888888888887654 3566665422
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCc-------cHHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPAL-------PYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~-------~yLDII~~ik~~~~~~Pi~aYq 198 (263)
-.+-.+.+..++.-.+-|||.+++=|=. -..+-.+++.+.. ++|++-|+
T Consensus 100 ----------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn 155 (315)
T 3si9_A 100 ----------SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI-SIPIIIYN 155 (315)
T ss_dssp ----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC-CCCEEEEe
Confidence 1122333222333334799998876522 1345566777777 79999998
No 94
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=34.96 E-value=63 Score=23.67 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=24.4
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeec
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aY 197 (263)
..|+|++- |+..-+++++++++..+..|++.+
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l 85 (154)
T 2rjn_A 51 SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVI 85 (154)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 47888874 667788999999998767776544
No 95
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=34.53 E-value=63 Score=23.99 Aligned_cols=48 Identities=8% Similarity=0.110 Sum_probs=32.7
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
.-|+|++- |+..-+++++++++..++.|++.+. -..+...+..+.+.+
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 133 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMIS-----ALGKEQLVKDCLIKG 133 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEe-----ccCcHHHHHHHHHcC
Confidence 46888875 6777899999999988777866443 334455555555444
No 96
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=34.30 E-value=37 Score=29.68 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=33.0
Q ss_pred HHHHhchhcCCCeeEecCCccH--HHHHHHHHhhCCCCCeee
Q psy15130 157 IAQARDVSQGADFLMVKPALPY--LDIISEVKSRHPAYPLFV 196 (263)
Q Consensus 157 ~e~~~Di~EGAD~ImVKPg~~y--LDII~~ik~~~~~~Pi~a 196 (263)
.|+..=++-|||+|=..|+..+ .+.++.++.-+++.|+++
T Consensus 123 tE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~p 164 (217)
T 3lab_A 123 SEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFCP 164 (217)
T ss_dssp HHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHcCCCEEEECccccccCHHHHHHHHhhhcCceEEE
Confidence 4556668899999999999876 699999999887777663
No 97
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=33.99 E-value=14 Score=28.09 Aligned_cols=32 Identities=19% Similarity=0.098 Sum_probs=20.8
Q ss_pred ccchhHHHHHHHHHhCCCCCceeeee-ecccccc
Q psy15130 107 TSATHIKDIRQKTANLSDTHKRLLQC-SKTLLQL 139 (263)
Q Consensus 107 m~DGrI~aIR~aLd~~G~~~v~im~y-~k~~ssg 139 (263)
||+ |+..+|+.|.++|+.-..|-.. --++++|
T Consensus 2 ~m~-Rl~~l~~~m~~~glDa~li~~~~ni~YlTG 34 (140)
T 3i7m_A 2 HMT-KLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp --C-HHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred cch-HHHHHHHHHHHcCCCEEEECCCCcceeecC
Confidence 456 9999999999999854333332 4445554
No 98
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=33.77 E-value=77 Score=22.80 Aligned_cols=48 Identities=10% Similarity=0.324 Sum_probs=32.9
Q ss_pred CCCeeEec---CCccHHHHHHHHHh--hCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKS--RHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~--~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++ ..++.|++.+. -..+......+.+.+
T Consensus 52 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls-----~~~~~~~~~~~~~~g 104 (147)
T 2zay_A 52 HPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALS-----GRATAKEEAQLLDMG 104 (147)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEE-----SSCCHHHHHHHHHHT
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEe-----CCCCHHHHHHHHhCC
Confidence 47888875 67778899999998 45567776554 445555555555554
No 99
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=33.77 E-value=41 Score=24.39 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=25.4
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecc
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYq 198 (263)
...|+|++- |+..-+++++++++..+..|++.+-
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt 102 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVT 102 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEe
Confidence 457888875 6667789999999987777765443
No 100
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=33.56 E-value=75 Score=27.87 Aligned_cols=113 Identities=12% Similarity=0.121 Sum_probs=64.7
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++|| || .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+ .++.++.-...
T Consensus 14 f~~dg-iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pvi~Gvg~--- 79 (291)
T 3a5f_A 14 FTNTG-VD------FDKLS---ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-KRIPVIAGTGS--- 79 (291)
T ss_dssp BCSSS-BC------HHHHH---HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECCC---
T ss_pred cCCCC-cC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCCc---
Confidence 35678 87 34444 445555666 777776665545566666778888888887654 25666654221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
.+-.+.+..++.=.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 80 -----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn 134 (291)
T 3a5f_A 80 -----------NNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV-STPIIIYN 134 (291)
T ss_dssp -----------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC-CSCEEEEE
T ss_pred -----------ccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 1223332222333346999988855321 122333444555 68999998
No 101
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=33.53 E-value=75 Score=22.29 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=30.3
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 97 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT-----GHGDVPMAVEAMKAG 97 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE-----CTTCHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEE-----CCCCHHHHHHHHHhC
Confidence 46777764 6777789999999876667766443 334444444444433
No 102
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=33.39 E-value=94 Score=28.27 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=26.7
Q ss_pred HHhchhcCCCeeEecC-----Ccc------HHHHHHHHHhhCCCCCeee
Q psy15130 159 QARDVSQGADFLMVKP-----ALP------YLDIISEVKSRHPAYPLFV 196 (263)
Q Consensus 159 ~~~Di~EGAD~ImVKP-----g~~------yLDII~~ik~~~~~~Pi~a 196 (263)
+..-+++|||+|=+.. |.. -+++|+.+++.+ +.|+..
T Consensus 80 A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI 127 (310)
T 2h9a_B 80 AKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMI 127 (310)
T ss_dssp HHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred HHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEE
Confidence 3444589999987764 422 177999999987 899764
No 103
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=33.09 E-value=1.7e+02 Score=26.13 Aligned_cols=114 Identities=10% Similarity=0.126 Sum_probs=69.0
Q ss_pred ee-CCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccc
Q psy15130 60 HV-KSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLL 137 (263)
Q Consensus 60 l~-~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~s 137 (263)
++ +||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...++...+..+ .++.++.-.-
T Consensus 22 f~~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg--- 88 (318)
T 3qfe_A 22 FDSKTDTLD------LASQE---RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-PDFPIMAGVG--- 88 (318)
T ss_dssp EETTTTEEC------HHHHH---HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-TTSCEEEECC---
T ss_pred ccCCCCCCC------HHHHH---HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---
Confidence 35 678888 34444 455556666 776666655545566666788888888777764 4566665421
Q ss_pred cccccccccccccchhHHHHHHHhchhcCCCeeEecCCccH---------HHHHHHHHhhCCCCCeeecc
Q psy15130 138 QLNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALPY---------LDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 138 sgPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~y---------LDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++-|=..| .+-.+++.+.. ++|++-|+
T Consensus 89 -----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~-~lPiilYn 146 (318)
T 3qfe_A 89 -----------AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS-PLPVVIYN 146 (318)
T ss_dssp -----------CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred -----------CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC-CCCEEEEe
Confidence 112233322222323369999888665333 23455666666 79999999
No 104
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.86 E-value=75 Score=23.20 Aligned_cols=49 Identities=14% Similarity=0.170 Sum_probs=32.7
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.+
T Consensus 65 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 116 (150)
T 4e7p_A 65 ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVT-----TFKRAGYFERAVKAG 116 (150)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE-----SCCCHHHHHHHHHTT
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEe-----CCCCHHHHHHHHHCC
Confidence 447888875 6777899999999987677765443 334444555554443
No 105
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=32.75 E-value=94 Score=21.33 Aligned_cols=48 Identities=17% Similarity=0.266 Sum_probs=30.8
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|++++- |+..-+++++++++..+..|++.+. -.++......+.+.|
T Consensus 44 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 94 (121)
T 2pl1_A 44 IPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLT-----ARESWQDKVEVLSAG 94 (121)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEe-----cCCCHHHHHHHHHcC
Confidence 46887764 6667789999999876667766544 444555544444433
No 106
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=32.43 E-value=81 Score=23.06 Aligned_cols=49 Identities=14% Similarity=0.268 Sum_probs=31.6
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++.+++..+..|++.+. -..+......+.+.|
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls-----~~~~~~~~~~~~~~g 97 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVT-----GHGDIPMAVQAIQDG 97 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEE-----CGGGHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE-----CCCChHHHHHHHhcC
Confidence 346887764 6667789999999987777866543 334444444444443
No 107
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=32.42 E-value=46 Score=23.65 Aligned_cols=49 Identities=10% Similarity=0.078 Sum_probs=31.6
Q ss_pred cCCCeeEec---CCccHHHHHHHHHh--hCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKS--RHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~--~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++ ..++.|++.+. -..+......+.+.+
T Consensus 53 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 106 (143)
T 3cnb_A 53 VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMT-----GALTDDNVSRIVALG 106 (143)
T ss_dssp TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEE-----SSCCHHHHHHHHHTT
T ss_pred cCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEe-----CCCCHHHHHHHHhcC
Confidence 347888875 67778899999998 45566766444 444445444444443
No 108
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=32.30 E-value=47 Score=23.48 Aligned_cols=33 Identities=9% Similarity=0.341 Sum_probs=24.9
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeec
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aY 197 (263)
+..|+|++- |+..-++++++++++.++.|++.+
T Consensus 45 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 80 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIV 80 (134)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEE
Confidence 347888875 677789999999998766775543
No 109
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=31.30 E-value=35 Score=29.56 Aligned_cols=19 Identities=16% Similarity=0.555 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhCCCCCeee
Q psy15130 178 YLDIISEVKSRHPAYPLFV 196 (263)
Q Consensus 178 yLDII~~ik~~~~~~Pi~a 196 (263)
++++++++|+.+++.|+..
T Consensus 81 ~~~~v~~ir~~~~~~Pi~~ 99 (262)
T 2ekc_A 81 VLELSETLRKEFPDIPFLL 99 (262)
T ss_dssp HHHHHHHHHHHCTTSCEEE
T ss_pred HHHHHHHHHhhcCCCCEEE
Confidence 4688999999865789655
No 110
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=30.12 E-value=95 Score=22.09 Aligned_cols=49 Identities=6% Similarity=0.104 Sum_probs=31.3
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
+.-|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 97 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVT-----GYASLENSVFSLNAG 97 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEe-----ccccHHHHHHHHhcc
Confidence 347888765 7777889999999876666765433 344444444444433
No 111
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=29.78 E-value=65 Score=26.81 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=30.3
Q ss_pred hcCCCeeEecCCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHH
Q psy15130 164 SQGADFLMVKPALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEK 213 (263)
Q Consensus 164 ~EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~a 213 (263)
++|+|+||-..|+ -+-+|+.. +.|++... +|| |.++++
T Consensus 49 ~~~~dVIISRGgt-----a~~lr~~~-~iPVV~I~-----~s~-~Dil~a 86 (196)
T 2q5c_A 49 QDEVDAIISRGAT-----SDYIKKSV-SIPSISIK-----VTR-FDTMRA 86 (196)
T ss_dssp TTTCSEEEEEHHH-----HHHHHTTC-SSCEEEEC-----CCH-HHHHHH
T ss_pred cCCCeEEEECChH-----HHHHHHhC-CCCEEEEc-----CCH-hHHHHH
Confidence 7999999999985 45566666 79999888 998 777773
No 112
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=29.59 E-value=85 Score=25.07 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=34.0
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 47 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt-----~~~~~~~~~~~~~~G 97 (225)
T 3c3w_A 47 RPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILT-----SYTSDEAMLDAILAG 97 (225)
T ss_dssp CCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGG-----GSSSHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEE-----CCCCHHHHHHHHHCC
Confidence 47888764 7778899999999987778877554 444555555555554
No 113
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.52 E-value=82 Score=22.76 Aligned_cols=48 Identities=6% Similarity=0.200 Sum_probs=30.7
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..+..|++.+. -.++......+.+.|
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 98 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIAT-----AHGSVDLAVNLIQKG 98 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEE-----SSCCHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE-----ecCcHHHHHHHHHCC
Confidence 46888764 7777889999999876566655433 344444444444433
No 114
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=29.47 E-value=66 Score=27.16 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=28.6
Q ss_pred HhchhcCCCeeEecCCccHHHHHHHHHhhCCCCCeeecc
Q psy15130 160 ARDVSQGADFLMVKPALPYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 160 ~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~aYq 198 (263)
..-.+.|||+|-+.|+. =++.++++++.. +.|+++..
T Consensus 173 ~~a~~~Gad~i~~~~~~-~~~~l~~i~~~~-~ipvva~G 209 (273)
T 2qjg_A 173 RLGAELGADIVKTSYTG-DIDSFRDVVKGC-PAPVVVAG 209 (273)
T ss_dssp HHHHHTTCSEEEECCCS-SHHHHHHHHHHC-SSCEEEEC
T ss_pred HHHHHcCCCEEEECCCC-CHHHHHHHHHhC-CCCEEEEe
Confidence 44556899999998753 368899999887 68987665
No 115
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=29.16 E-value=55 Score=28.88 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=60.0
Q ss_pred HHHHHHHhH-hhHhhccccc-----ccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccc-hhH
Q psy15130 82 QLVMAYSRY-IICIALHDAW-----QTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFH-CIA 154 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm-----~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~-~~~ 154 (263)
+.+-.+.++ |+.|---|-. .+-|.+-+-.||++++++-++.|. +..|+...-....| +...-. -.+
T Consensus 97 ~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~-~~~v~aRtd~~~~g------~~~~~~~~~~ 169 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGV-DVVINGRTDAVKLG------ADVFEDPMVE 169 (255)
T ss_dssp HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECHHHHC------TTTSSSHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC-CeEEEEEechhhcc------CCcchHHHHH
Confidence 445555566 6666655542 111223345688888888777664 34455543221111 000001 133
Q ss_pred HHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCCCCCe
Q psy15130 155 RCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHPAYPL 194 (263)
Q Consensus 155 ~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi 194 (263)
.++..+.=.+-|||+|.+ ++.+-.+.++++.+.. ..|+
T Consensus 170 ai~ra~a~~eAGAd~i~~-e~~~~~~~~~~i~~~~-~~P~ 207 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYP-VGLSTAEQVERLVDAV-SVPV 207 (255)
T ss_dssp HHHHHHHHHHHTCSEEEE-CCCCSHHHHHHHHTTC-SSCB
T ss_pred HHHHHHHHHHcCCcEEEE-cCCCCHHHHHHHHHhC-CCCE
Confidence 344455556689999988 6777789999999987 6886
No 116
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=27.65 E-value=1.6e+02 Score=23.03 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=32.4
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++..++.|++.+. ...+......+.+.|
T Consensus 42 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt-----~~~~~~~~~~~~~~g 93 (220)
T 1p2f_A 42 EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLT-----LLSDDESVLKGFEAG 93 (220)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEE-----SCCSHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEE-----cCCCHHHHHHHHHcC
Confidence 557887764 6777889999999887677866543 334444444454444
No 117
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=27.56 E-value=2.5e+02 Score=24.64 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=70.7
Q ss_pred CCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccccc
Q psy15130 62 KSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLN 140 (263)
Q Consensus 62 ~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgP 140 (263)
+||.|| .+.+. +.+--+.++ .|-+-+...---.|+=..+=|...+|...+..+-.++.++.-..
T Consensus 21 ~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg------ 85 (301)
T 3m5v_A 21 KNGKVD------EQSYA---RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG------ 85 (301)
T ss_dssp ETTEEC------HHHHH---HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC------
T ss_pred CCCCCC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC------
Confidence 578887 34444 444455667 78777766655556667788888888888876533567776422
Q ss_pred ccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------HHHHHHHHHhhCCCCCeeecc
Q psy15130 141 FLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 141 FRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.-.+-|||.+++-|-.. ..+-.+++.+.. ++|++-|+
T Consensus 86 --------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn 141 (301)
T 3m5v_A 86 --------SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV-DIPVLLYN 141 (301)
T ss_dssp --------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 11223332323333347999988865321 345566677777 79999998
No 118
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=27.46 E-value=67 Score=28.93 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=55.5
Q ss_pred HHHHHHHhH-hhHhhcccccc-------------cCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccc
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ-------------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQT 147 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~-------------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~ 147 (263)
+.+-.+.++ |+-|---|-.. +-|-+-+-.||+++|++.+.- +..|++-.-....
T Consensus 94 ~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~---~~~i~aRtda~~a--------- 161 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADR---DFVVIARVEALIA--------- 161 (290)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSST---TSEEEEEECTTTT---------
T ss_pred HHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccC---CcEEEEeehHhhc---------
Confidence 455666677 77776655431 223333345677777665431 2233333211100
Q ss_pred cccchhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCCC--CCee
Q psy15130 148 NEFHCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHPA--YPLF 195 (263)
Q Consensus 148 yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~~--~Pi~ 195 (263)
...-.+.+.....=.+-|||+|.+..+.+-.+.++++.+.. . .|++
T Consensus 162 -~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~-~~~vP~i 209 (290)
T 2hjp_A 162 -GLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSW-PGKVPLV 209 (290)
T ss_dssp -TCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHC-CCSSCEE
T ss_pred -cccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHc-CCCCCEE
Confidence 00123333444444557999999866577778999999887 4 7855
No 119
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=27.41 E-value=44 Score=23.79 Aligned_cols=46 Identities=15% Similarity=0.283 Sum_probs=29.7
Q ss_pred CCeeEec---CCccHHHHHHHHHhh-CCCCCeeecccceeeccCchhHHHHHHHH
Q psy15130 167 ADFLMVK---PALPYLDIISEVKSR-HPAYPLFVYQERCITVSGHFEANEKAMEM 217 (263)
Q Consensus 167 AD~ImVK---Pg~~yLDII~~ik~~-~~~~Pi~aYqERvItVSGEyami~aAa~~ 217 (263)
.|+|++- |+..-+++++++++. .++.|++.+. -..+......+.+.
T Consensus 53 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s-----~~~~~~~~~~~~~~ 102 (136)
T 3hdv_A 53 IGLMITDLRMQPESGLDLIRTIRASERAALSIIVVS-----GDTDVEEAVDVMHL 102 (136)
T ss_dssp EEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEE-----SSCCHHHHHHHHHT
T ss_pred CcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEe-----CCCChHHHHHHHhC
Confidence 6777765 677789999999987 5566766443 33444445444433
No 120
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=27.38 E-value=1.3e+02 Score=27.62 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=30.2
Q ss_pred chhHHHHHHHhchhcCCCeeEe-----cCCcc--------------HHHHHHHHHhhCCCCCe
Q psy15130 151 HCIARCIAQARDVSQGADFLMV-----KPALP--------------YLDIISEVKSRHPAYPL 194 (263)
Q Consensus 151 ~~~~~~~e~~~Di~EGAD~ImV-----KPg~~--------------yLDII~~ik~~~~~~Pi 194 (263)
+..+.+..++.-+++|||+|=+ .||.. .+-+|+.+++.+ +.|+
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpI 108 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLI 108 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeE
Confidence 3455556777788999999754 57776 566788888776 6664
No 121
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=27.21 E-value=1.2e+02 Score=27.45 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=28.7
Q ss_pred hhHHHHHHHhchhcCCCeeEec-----CCcc----------HHHHHHHHHhhCCCCCee
Q psy15130 152 CIARCIAQARDVSQGADFLMVK-----PALP----------YLDIISEVKSRHPAYPLF 195 (263)
Q Consensus 152 ~~~~~~e~~~Di~EGAD~ImVK-----Pg~~----------yLDII~~ik~~~~~~Pi~ 195 (263)
..+....+..-+++|||+|=+- ||.. ++.+|+++++.+ +.|+.
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiS 119 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPIS 119 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEE
Confidence 3444456667778999998665 5533 677788888876 67754
No 122
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=26.50 E-value=98 Score=24.89 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=22.5
Q ss_pred chhcCCCeeEec-CC--ccHHHHHHHHHhhCCCCCee
Q psy15130 162 DVSQGADFLMVK-PA--LPYLDIISEVKSRHPAYPLF 195 (263)
Q Consensus 162 Di~EGAD~ImVK-Pg--~~yLDII~~ik~~~~~~Pi~ 195 (263)
.+..|+|+|++- |- ..=+++|+++|+.+++.|+.
T Consensus 21 ~~~~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~ 57 (211)
T 3f4w_A 21 KVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVL 57 (211)
T ss_dssp HHGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEE
T ss_pred HhhcCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEE
Confidence 334599998752 31 11258999999986578863
No 123
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=26.33 E-value=91 Score=22.70 Aligned_cols=49 Identities=14% Similarity=0.321 Sum_probs=30.9
Q ss_pred cCCCeeEec---CCccHHHHHHHHHh--hCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKS--RHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~--~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++ ..++.|++.+- -..+...+..+.+.+
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t-----~~~~~~~~~~~~~~g 111 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILT-----TTDDQREIQRCYDLG 111 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEe-----cCCCHHHHHHHHHCC
Confidence 446777765 77888999999998 45566765443 333444444444433
No 124
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=26.24 E-value=75 Score=27.40 Aligned_cols=40 Identities=13% Similarity=0.328 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhCCCCCeee--cccceeeccCchhHHHHHHHHH
Q psy15130 178 YLDIISEVKSRHPAYPLFV--YQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 178 yLDII~~ik~~~~~~Pi~a--YqERvItVSGEyami~aAa~~~ 218 (263)
++++++++|+.+.+.|+.. |..+ +-..|.-..++.++++|
T Consensus 81 ~~~~v~~ir~~~~~~Pv~lm~y~n~-v~~~g~~~~~~~~~~aG 122 (268)
T 1qop_A 81 CFEMLAIIREKHPTIPIGLLMYANL-VFNNGIDAFYARCEQVG 122 (268)
T ss_dssp HHHHHHHHHHHCSSSCEEEEECHHH-HHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCEEEEEcccH-HHHhhHHHHHHHHHHcC
Confidence 4589999999844799654 4322 22334445556566665
No 125
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.15 E-value=1e+02 Score=23.63 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=35.0
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|+.- |+..=+++++++++..++.|++.+- -..+......|.+.|
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt-----~~~~~~~~~~a~~~G 101 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLT-----GYASIATAVQAVKDG 101 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEE-----SSCCHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEe-----CCCCHHHHHHHHHhC
Confidence 346777664 7777789999999987777766443 555666677777776
No 126
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=25.99 E-value=79 Score=22.31 Aligned_cols=48 Identities=10% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..+..|++.+. -.++......+.+.|
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 97 (136)
T 1mvo_A 47 KPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLT-----AKDEEFDKVLGLELG 97 (136)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEE-----CTTCCCCHHHHHHTT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEE-----CCCCHHHHHHHHhCC
Confidence 46888764 6667789999999876667766543 445555444444443
No 127
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=25.98 E-value=1.2e+02 Score=21.33 Aligned_cols=49 Identities=14% Similarity=0.332 Sum_probs=31.9
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhh--CCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSR--HPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~--~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|+.- |+..=++++++++++ +++.|++... -.++......|.+.|
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s-----~~~~~~~~~~~~~~G 98 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLT-----AKGGEEDESLALSLG 98 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEE-----SCCSHHHHHHHHHTT
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEe-----cCCchHHHHHHHhcC
Confidence 457888775 777888999999875 3456765433 445555555555444
No 128
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=25.66 E-value=91 Score=29.81 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=41.1
Q ss_pred HHhchhcCCCeeEecCC----ccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 159 QARDVSQGADFLMVKPA----LPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 159 ~~~Di~EGAD~ImVKPg----~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
+..=++.|+|.|.+-.+ ...+|.|+++++++++.|+++-+ |. -.+..+.+.++|...+.-
T Consensus 261 a~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-----v~-t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-----VA-TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-----EC-SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-----ec-cHHHHHHHHHhCCCEEEE
Confidence 33445689999998533 34679999999999778877644 32 345566677777655543
No 129
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=25.44 E-value=3.3e+02 Score=23.80 Aligned_cols=111 Identities=7% Similarity=0.021 Sum_probs=66.0
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+= +++-..
T Consensus 11 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g----viaGvg---- 73 (293)
T 1w3i_A 11 FTKDNRID------KEKLK---IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK----IIFQVG---- 73 (293)
T ss_dssp BCTTSSBC------HHHHH---HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC----EEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC----EEEecC----
Confidence 35678888 34444 455556667 7777666654444666667788888888766542 433221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc--------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP--------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~--------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++=|=.. ..+-.+++.+.. +.|++-|+
T Consensus 74 ----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiilYn 130 (293)
T 1w3i_A 74 ----------GLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS-PHPVYLYN 130 (293)
T ss_dssp ----------CSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC-CCCEEEEE
Confidence 12223342333333447999988854322 234455667776 79999998
No 130
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=25.35 E-value=1.7e+02 Score=25.95 Aligned_cols=131 Identities=10% Similarity=0.024 Sum_probs=78.5
Q ss_pred HHHHHhhCCCeEEEeeeccccCCCCCcceeeeC-CCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcc
Q psy15130 30 SCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVK-SNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQT 107 (263)
Q Consensus 30 ~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~-dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm 107 (263)
.+.+++.|..++... .-|| ++ ||.|| .+.+. +.+--+.++ .|-+-+...---.|+=.
T Consensus 5 ~~~~~~~~~Gv~~a~---vTPf---------~~~dg~iD------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls 63 (316)
T 3e96_A 5 NKPLAKALETISGIP---ITPF---------RKSDGSID------WHHYK---ETVDRIVDNGIDVIVPCGNTSEFYALS 63 (316)
T ss_dssp --CHHHHTSSEEECC---CCCB---------CTTTCCBC------HHHHH---HHHHHHHTTTCCEECTTSGGGTGGGSC
T ss_pred chhhhhcCCceEEee---eCCc---------cCCCCCCC------HHHHH---HHHHHHHHcCCCEEEeCccccCcccCC
Confidence 344566666555432 2344 34 67887 34444 455556667 88777776665567777
Q ss_pred cchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHHHHHhchhcCCCeeEecCCc-------cHHH
Q psy15130 108 SATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPAL-------PYLD 180 (263)
Q Consensus 108 ~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~-------~yLD 180 (263)
.+=|...+|...+..+ .++.++.-... +-.+.+..++.-.+-|||.+++=|=. -..+
T Consensus 64 ~eEr~~v~~~~v~~~~-grvpViaGvg~---------------~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~ 127 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVH-GRALVVAGIGY---------------ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYA 127 (316)
T ss_dssp HHHHHHHHHHHHHHHT-TSSEEEEEECS---------------SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCcEEEEeCc---------------CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH
Confidence 7889899988888765 36777765321 12223222222334699999986422 1234
Q ss_pred HHHHHHhhCCCCCeeecc
Q psy15130 181 IISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 181 II~~ik~~~~~~Pi~aYq 198 (263)
-.+++.+.. ++|++-|+
T Consensus 128 ~f~~va~a~-~lPiilYn 144 (316)
T 3e96_A 128 YFRDIIEAL-DFPSLVYF 144 (316)
T ss_dssp HHHHHHHHH-TSCEEEEE
T ss_pred HHHHHHHhC-CCCEEEEe
Confidence 556666666 69999998
No 131
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=25.17 E-value=73 Score=27.29 Aligned_cols=82 Identities=15% Similarity=0.119 Sum_probs=50.3
Q ss_pred HHHHHHHHHhCCCCCceeeeeeccccccccccc-------------------ccccccchhHHHHHHHhc-h--hcCCCe
Q psy15130 112 IKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKH-------------------VQTNEFHCIARCIAQARD-V--SQGADF 169 (263)
Q Consensus 112 I~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~-------------------~~~yq~~~~~~~~e~~~D-i--~EGAD~ 169 (263)
+.++.++|...|..++.++..|....++.|++. ......+ .+.+.++... + ..|||.
T Consensus 105 ~~A~~~al~~~g~~rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ada 183 (240)
T 3ixl_A 105 STAVLNGLRALGVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVD-TATLVDLCVRAFEAAPDSDG 183 (240)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCC-HHHHHHHHHHHHHTSTTCSE
T ss_pred HHHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCC-HHHHHHHHHHHhhcCCCCCE
Confidence 466667777778878888876554444444421 0111112 2334555555 4 578998
Q ss_pred eEe-cCCccHHHHHHHHHhhCCCCCee
Q psy15130 170 LMV-KPALPYLDIISEVKSRHPAYPLF 195 (263)
Q Consensus 170 ImV-KPg~~yLDII~~ik~~~~~~Pi~ 195 (263)
|+. =-.++.++++.++.+.+ .+|++
T Consensus 184 ivL~CT~l~~l~~i~~le~~l-g~PVi 209 (240)
T 3ixl_A 184 ILLSSGGLLTLDAIPEVERRL-GVPVV 209 (240)
T ss_dssp EEEECTTSCCTTHHHHHHHHH-SSCEE
T ss_pred EEEeCCCCchhhhHHHHHHHh-CCCEE
Confidence 654 45667788899998887 68875
No 132
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.10 E-value=86 Score=22.54 Aligned_cols=49 Identities=12% Similarity=0.244 Sum_probs=30.3
Q ss_pred cCCCeeEec---CCccHHHHHHHHHh--hCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKS--RHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~--~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..-|+|++- |+..-+++++++++ ..++.|++.+. -..+......+.+.|
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s-----~~~~~~~~~~~~~~g 103 (144)
T 3kht_A 50 AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILT-----DNVSDDRAKQCMAAG 103 (144)
T ss_dssp CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEE-----TTCCHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEe-----CCCCHHHHHHHHHcC
Confidence 347888876 55566889999998 45567766443 334445554444443
No 133
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=25.06 E-value=49 Score=24.15 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=27.0
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++.+++.|++.+. -..+......+.+.+
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 100 (154)
T 2qsj_A 49 NTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALIS-----GETDHELIRAALEAG 100 (154)
T ss_dssp CCCSEEEECC------CHHHHHHHHHHCTTSEEEEC----------CHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEe-----CCCCHHHHHHHHHcc
Confidence 347888764 5556689999999987677766543 333344444444444
No 134
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=24.84 E-value=1.2e+02 Score=27.93 Aligned_cols=59 Identities=22% Similarity=0.157 Sum_probs=34.8
Q ss_pred hhHHHHHHHhchhcCCCeeEec-----CCcc----------HHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHH
Q psy15130 152 CIARCIAQARDVSQGADFLMVK-----PALP----------YLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAME 216 (263)
Q Consensus 152 ~~~~~~e~~~Di~EGAD~ImVK-----Pg~~----------yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~ 216 (263)
..+.+..+..-+++|||+|=+= || . .+-+|+.+++.+++.|+.. =|=..+.+++|.+
T Consensus 64 ~~~a~~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI-------DT~~~~VaeaAl~ 135 (318)
T 2vp8_A 64 DAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISV-------DTWRAQVAKAACA 135 (318)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCEEEE-------ECSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEE-------eCCCHHHHHHHHH
Confidence 3445566777888999998665 77 3 4556778787765667431 1223455555555
Q ss_pred HH
Q psy15130 217 MI 218 (263)
Q Consensus 217 ~~ 218 (263)
+|
T Consensus 136 aG 137 (318)
T 2vp8_A 136 AG 137 (318)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 135
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=24.46 E-value=87 Score=22.12 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=24.5
Q ss_pred CCCeeEec---C-CccHHHHHHHHHhhCCCCCeeecc
Q psy15130 166 GADFLMVK---P-ALPYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 166 GAD~ImVK---P-g~~yLDII~~ik~~~~~~Pi~aYq 198 (263)
..|+|++- | +..-+++++++++. +..|++.+.
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~ls 89 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFIT 89 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEEE
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEEe
Confidence 47888875 4 57788999999988 678876554
No 136
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=24.42 E-value=2.6e+02 Score=24.35 Aligned_cols=111 Identities=8% Similarity=-0.021 Sum_probs=64.9
Q ss_pred eeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeeccccc
Q psy15130 60 HVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQ 138 (263)
Q Consensus 60 l~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ss 138 (263)
+++||.|| .+.+. +.+--+.++ +|-+-+...---.|+=..+=|...+|...+..+= +++-..
T Consensus 11 f~~dg~iD------~~~l~---~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g----ViaGvg---- 73 (288)
T 2nuw_A 11 FDKQGKVN------VDALK---THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK----LIFQVG---- 73 (288)
T ss_dssp BCTTSCBC------HHHHH---HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC----EEEECC----
T ss_pred CCCCCCcC------HHHHH---HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC----eEEeeC----
Confidence 35678887 34444 455555666 7777666555445666667788888887765442 333221
Q ss_pred ccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc--------HHHHHHHHHhhCCCCCeeecc
Q psy15130 139 LNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP--------YLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 139 gPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~--------yLDII~~ik~~~~~~Pi~aYq 198 (263)
..+-.+.+..++.=.+-|||.+++-|=.. ..+-.+++.+.. +.|++-|+
T Consensus 74 ----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiilYn 130 (288)
T 2nuw_A 74 ----------SLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS-SHSLYIYN 130 (288)
T ss_dssp ----------CSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc-CCCEEEEE
Confidence 11223332222223346999988854322 234556677776 79999998
No 137
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.38 E-value=1e+02 Score=21.51 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=29.8
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhC--CCCCeeecccceeeccCchhHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRH--PAYPLFVYQERCITVSGHFEANEKAMEM 217 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~--~~~Pi~aYqERvItVSGEyami~aAa~~ 217 (263)
.-.|+|++- |+..-+++++++++.. ++.|++.+. -..+......+.+.
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls-----~~~~~~~~~~~~~~ 106 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLS-----TSINEDDIFHSYDL 106 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEE-----SCCCHHHHHHHHHT
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEe-----cCCcHHHHHHHHHh
Confidence 347888764 6667789999999864 456665443 33444444444433
No 138
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=24.05 E-value=3.6e+02 Score=24.08 Aligned_cols=153 Identities=12% Similarity=0.005 Sum_probs=86.4
Q ss_pred ccccccchhchHHHHHHHHhHhhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccc
Q psy15130 70 VFHVSENFCTDTQLVMAYSRYIICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNE 149 (263)
Q Consensus 70 d~tv~~~~~rla~~Al~~A~AAd~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq 149 (263)
+.|. +.+.++.+.|..|-=+|-||-|+ .|...++.|...+ +.+-.-..| | ..+
T Consensus 55 ~~t~-~~I~~lc~eA~~~~~aaVCV~p~-------------~V~~a~~~L~gs~---v~v~tVigF----P------~G~ 107 (260)
T 3r12_A 55 FATP-DDIKKLCLEARENRFHGVCVNPC-------------YVKLAREELEGTD---VKVVTVVGF----P------LGA 107 (260)
T ss_dssp TCCH-HHHHHHHHHHHHTTCSEEEECGG-------------GHHHHHHHHTTSC---CEEEEEEST----T------TCC
T ss_pred CCCH-HHHHHHHHHHHhcCCcEEEECHH-------------HHHHHHHHhcCCC---CeEEEEecC----C------CCC
Confidence 4454 56666667777765457788755 7888899995433 222211221 2 233
Q ss_pred cchhHHHHHHHhchhcCCCeeE-ecC-C----ccH---HHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHH
Q psy15130 150 FHCIARCIAQARDVSQGADFLM-VKP-A----LPY---LDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILE 220 (263)
Q Consensus 150 ~~~~~~~~e~~~Di~EGAD~Im-VKP-g----~~y---LDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~ 220 (263)
.+......|++.-++.|||=|= |-+ | ..| ++=|+++++..++.|+-+.-|.+.- ..+.+..|++...
T Consensus 108 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---t~eei~~A~~ia~- 183 (260)
T 3r12_A 108 NETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL---DTEEKIAACVISK- 183 (260)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---CHHHHHHHHHHHH-
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC---CHHHHHHHHHHHH-
Confidence 3444445688888889998642 222 1 123 3445555666655665555555422 2356666777664
Q ss_pred hhccCCCCCcccccccccccccch---HHHhHhhhhcccccc
Q psy15130 221 KIAEDPSSGSCSNVSYALRYGTEG---WGELLHRFTRTSVGF 259 (263)
Q Consensus 221 kia~dp~ags~l~iSY~~l~Gp~~---~~~~~~~~~~~~~~~ 259 (263)
.+|++...+-.|-..+.+ --+++.+.+...+|+
T Consensus 184 ------eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~~v~V 219 (260)
T 3r12_A 184 ------LAGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEMGV 219 (260)
T ss_dssp ------HTTCSEEECCCSSSSCCCCHHHHHHHHHHHCTTSEE
T ss_pred ------HhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCCCceE
Confidence 468888877766443322 345555555555554
No 139
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=23.87 E-value=51 Score=28.95 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=44.1
Q ss_pred HHHHHHHHhH-hhHhhcc-cccccCCCcc-cch--hHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHH
Q psy15130 81 TQLVMAYSRY-IICIALH-DAWQTRPIQT-SAT--HIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIAR 155 (263)
Q Consensus 81 a~~Al~~A~A-Ad~VAPs-dmm~~~Psdm-~DG--rI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~ 155 (263)
..||+.-|+| |++|||= +-+ .|. .|| .|+.|++.+++.|+.-+ ||. ++ ||..
T Consensus 115 ~~QA~~Aa~AGa~yISPfvgRi----~d~g~dG~~~v~~i~~~~~~~~~~T~-Ila-AS------~Rn~----------- 171 (223)
T 3s1x_A 115 PIQALLAAKAGVTYVSPFVGRL----DDIGEDGMQIIDMIRTIFNNYIIKTQ-ILV-AS------IRNP----------- 171 (223)
T ss_dssp HHHHHHHHHTTCSEEEEBSHHH----HHTTSCTHHHHHHHHHHHHHTTCCSE-EEE-BS------CCSH-----------
T ss_pred HHHHHHHHHcCCeEEEeecchH----hhcCCCHHHHHHHHHHHHHHcCCCCE-EEE-Ee------CCCH-----------
Confidence 4699999999 9999981 000 000 122 58899999999998433 332 11 3322
Q ss_pred HHHHHhchhcCCCeeEecCC
Q psy15130 156 CIAQARDVSQGADFLMVKPA 175 (263)
Q Consensus 156 ~~e~~~Di~EGAD~ImVKPg 175 (263)
.++..=..-|||.+.+-|.
T Consensus 172 -~~v~~aa~~G~d~~Tip~~ 190 (223)
T 3s1x_A 172 -IHVLRSAVIGADVVTVPFN 190 (223)
T ss_dssp -HHHHHHHHHTCSEEEECHH
T ss_pred -HHHHHHHHcCCCEEEeCHH
Confidence 1222223579999998886
No 140
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=23.13 E-value=3.5e+02 Score=23.78 Aligned_cols=153 Identities=10% Similarity=-0.027 Sum_probs=85.7
Q ss_pred ccccccchhchHHHHHHHHhHhhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccc
Q psy15130 70 VFHVSENFCTDTQLVMAYSRYIICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNE 149 (263)
Q Consensus 70 d~tv~~~~~rla~~Al~~A~AAd~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq 149 (263)
+.|. +.+.++.+.|..|-=++-||-|+ .|...|+.|...+ +.+-.-.-| | ..+
T Consensus 39 ~~t~-~~i~~lc~eA~~~~~~aVcV~p~-------------~v~~a~~~L~~s~---v~v~tVigF----P------~G~ 91 (239)
T 3ngj_A 39 DATE-EQIRKLCSEAAEYKFASVCVNPT-------------WVPLCAELLKGTG---VKVCTVIGF----P------LGA 91 (239)
T ss_dssp TCCH-HHHHHHHHHHHHHTCSEEEECGG-------------GHHHHHHHHTTSS---CEEEEEEST----T------TCC
T ss_pred CCCH-HHHHHHHHHHHhcCCcEEEECHH-------------HHHHHHHHhCCCC---CeEEEEecc----C------CCC
Confidence 4454 56666777887775557788754 7888899994433 222222222 2 133
Q ss_pred cchhHHHHHHHhchhcCCCeeE-ecC------Cc--cHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHH
Q psy15130 150 FHCIARCIAQARDVSQGADFLM-VKP------AL--PYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILE 220 (263)
Q Consensus 150 ~~~~~~~~e~~~Di~EGAD~Im-VKP------g~--~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~ 220 (263)
.+......|++.-++.|||-|= |-+ |- ..++-|+++++..++.|+-+.-|++. .+ .+.++.|++...
T Consensus 92 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt--~eei~~a~~ia~- 167 (239)
T 3ngj_A 92 TPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY-LT--NEEKVEVCKRCV- 167 (239)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG-SC--HHHHHHHHHHHH-
T ss_pred CchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC-CC--HHHHHHHHHHHH-
Confidence 3344445678888888998642 222 21 23445555666654455444446664 32 345776777665
Q ss_pred hhccCCCCCccccccccccc--cc-chHHHhHhhhhcccccc
Q psy15130 221 KIAEDPSSGSCSNVSYALRY--GT-EGWGELLHRFTRTSVGF 259 (263)
Q Consensus 221 kia~dp~ags~l~iSY~~l~--Gp-~~~~~~~~~~~~~~~~~ 259 (263)
.+|++...+-.|.. |+ ...-+++.+.....+|+
T Consensus 168 ------~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~V 203 (239)
T 3ngj_A 168 ------AAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKALV 203 (239)
T ss_dssp ------HHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSEE
T ss_pred ------HHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCceE
Confidence 35777776664432 22 12445666665555554
No 141
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=23.08 E-value=1.5e+02 Score=20.36 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=30.1
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
.-|+|++- |+..-+++++++++ .+..|++... -..+......+.+.|
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~ii~~s-----~~~~~~~~~~~~~~g 95 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRE-RSTVGIILVT-----GRSDRIDRIVGLEMG 95 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHT-TCCCEEEEEE-----SSCCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHh-cCCCCEEEEE-----CCCChhhHHHHHHhC
Confidence 46887764 66677899999998 4566755433 444555555555544
No 142
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=23.06 E-value=70 Score=25.78 Aligned_cols=115 Identities=9% Similarity=-0.054 Sum_probs=65.9
Q ss_pred HHHHHHHHhhCCCeEEEeeeccccCCCCCcceeeeCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCC
Q psy15130 27 LVLSCLVLSCLPAFLWWVQTCAMQRAKHLHCTLHVKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPI 105 (263)
Q Consensus 27 ~~~~~~ik~~fP~l~v~~DvCLceYT~HGHCGil~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Ps 105 (263)
+-.++.||+.+|++-|.+|. ...++ . + ..+-..+++ ||.|--++.-
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~-------------~~~~~-~--------~------~~~~~~~~~Gad~v~v~~~~----- 87 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADA-------------KIMDG-G--------H------FESQLLFDAGADYVTVLGVT----- 87 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEE-------------EECSC-H--------H------HHHHHHHHTTCSEEEEETTS-----
T ss_pred HHHHHHHHHhCCCCEEEEEE-------------Eeccc-h--------H------HHHHHHHhcCCCEEEEeCCC-----
Confidence 45688899999988774432 11122 1 1 123344566 8877644332
Q ss_pred cccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHHHHHhchhcCCCeeEecCCcc-------H
Q psy15130 106 QTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP-------Y 178 (263)
Q Consensus 106 dm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~-------y 178 (263)
.+..+..+.+...+.|. ..++.. .+| ..+.++ ++.=.+.|+|+|.+.||.+ -
T Consensus 88 --~~~~~~~~~~~~~~~g~--~~~v~~-----~~~---------~t~~~~---~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 88 --DVLTIQSCIRAAKEAGK--QVVVDM-----ICV---------DDLPAR---VRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp --CHHHHHHHHHHHHHHTC--EEEEEC-----TTC---------SSHHHH---HHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred --ChhHHHHHHHHHHHcCC--eEEEEe-----cCC---------CCHHHH---HHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 13456777777777775 233211 112 123333 2333457999999888732 4
Q ss_pred HHHHHHHHhhCCCCCee
Q psy15130 179 LDIISEVKSRHPAYPLF 195 (263)
Q Consensus 179 LDII~~ik~~~~~~Pi~ 195 (263)
++.++++++.+++.|+.
T Consensus 147 ~~~i~~l~~~~~~~~i~ 163 (211)
T 3f4w_A 147 IDDLITMLKVRRKARIA 163 (211)
T ss_dssp HHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHcCCCcEE
Confidence 68899999886567854
No 143
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=23.04 E-value=1.5e+02 Score=20.60 Aligned_cols=49 Identities=12% Similarity=0.244 Sum_probs=31.5
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhh--CCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSR--HPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~--~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++. .++.|++.+. -.++......+.+.|
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 103 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILT-----AQGDRALVQKAAALG 103 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECC-----SCCCHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEe-----CCCCHHHHHHHHHcC
Confidence 346888764 666778999999875 3455665443 455555555555554
No 144
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=22.89 E-value=87 Score=22.14 Aligned_cols=47 Identities=9% Similarity=0.231 Sum_probs=30.2
Q ss_pred CCCeeEec---C-----CccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHH
Q psy15130 166 GADFLMVK---P-----ALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEM 217 (263)
Q Consensus 166 GAD~ImVK---P-----g~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~ 217 (263)
..|+|++- | +..-+++++++++.++..|++.+. -..+......+.+.
T Consensus 47 ~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls-----~~~~~~~~~~~~~~ 101 (140)
T 2qr3_A 47 NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFT-----AYADIDLAVRGIKE 101 (140)
T ss_dssp CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEE-----EGGGHHHHHHHHHT
T ss_pred CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEE-----CCCCHHHHHHHHHc
Confidence 46887764 3 566789999999987778876554 44444444444443
No 145
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.80 E-value=1.4e+02 Score=21.14 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=30.1
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhC--CCCCeeecccceeeccCchhHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRH--PAYPLFVYQERCITVSGHFEANEKAMEM 217 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~--~~~Pi~aYqERvItVSGEyami~aAa~~ 217 (263)
...|+|++- |+..-+++++++++.. ++.|++.+. -..+......+.+.
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t-----~~~~~~~~~~~~~~ 113 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMT-----TSSNPKDIEICYSY 113 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEE-----SCCCHHHHHHHHHT
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEe-----CCCCHHHHHHHHHC
Confidence 457888865 6677889999999864 456766443 33444444444433
No 146
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=22.63 E-value=30 Score=26.56 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=36.3
Q ss_pred eeEecCCccHHHHHHHHHhhCCCCC-eeeccc-ceeeccC-chhHHHHHHHHH--HHhhccCCC
Q psy15130 169 FLMVKPALPYLDIISEVKSRHPAYP-LFVYQE-RCITVSG-HFEANEKAMEMI--LEKIAEDPS 227 (263)
Q Consensus 169 ~ImVKPg~~yLDII~~ik~~~~~~P-i~aYqE-RvItVSG-Eyami~aAa~~~--l~kia~dp~ 227 (263)
.+|+|.|. .|+++.+.++ .- +--=.+ ..|+++| ..+.+++|-+++ ++....-|+
T Consensus 28 ~vIG~gGk----~Ik~I~e~tG-v~~IdI~eddG~V~I~g~~~ea~~~A~~~I~~ie~~~~vp~ 86 (91)
T 2cpq_A 28 LAIGTHGS----NIQQARKVPG-VTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPS 86 (91)
T ss_dssp HHHTTTTH----HHHHHHTSTT-EEEEEEETTTTEEEEEESSHHHHHHHHHHHSCCCCCCCCCS
T ss_pred hhcCCCcH----HHHHHHHHhC-CeEEEEEcCCCEEEEEECCHHHHHHHHHHHHhhheEEecCh
Confidence 47888897 9999999884 43 222223 8999999 667777776666 444444444
No 147
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=22.44 E-value=2.1e+02 Score=23.26 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=50.0
Q ss_pred HHHHHHHhH--hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHHHH-H
Q psy15130 82 QLVMAYSRY--IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIARCI-A 158 (263)
Q Consensus 82 ~~Al~~A~A--Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~~~-e 158 (263)
+.++..++. .|.|=...-. . |.++.+..+..+|+.|++.|+.=..+-.++- ...+.++ .
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----------------~~~~~~~~~ 94 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFH-L-PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----------------KSEEEIDRA 94 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTT-S-CTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----------------CSHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeccc-C-CCCCCHHHHHHHHHHHHHcCCeEEEEecccc----------------CCHHHHHHH
Confidence 344555544 5555322111 1 5677788999999999999984322211110 1122211 1
Q ss_pred HHhchhcCCCeeEecCCccHHHHHHHHHhhC
Q psy15130 159 QARDVSQGADFLMVKPALPYLDIISEVKSRH 189 (263)
Q Consensus 159 ~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~ 189 (263)
+..=-.-||..|.+.|+...+.-+.+..++.
T Consensus 95 i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~ 125 (257)
T 3lmz_A 95 FDYAKRVGVKLIVGVPNYELLPYVDKKVKEY 125 (257)
T ss_dssp HHHHHHHTCSEEEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEecCCHHHHHHHHHHHHHc
Confidence 1222236899999999876666665555554
No 148
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=22.40 E-value=1.2e+02 Score=27.97 Aligned_cols=59 Identities=19% Similarity=0.205 Sum_probs=38.6
Q ss_pred HhchhcCCCeeEe--cCC--ccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHHhhcc
Q psy15130 160 ARDVSQGADFLMV--KPA--LPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILEKIAE 224 (263)
Q Consensus 160 ~~Di~EGAD~ImV--KPg--~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~kia~ 224 (263)
+.=++.|+|+|.+ -.| ..+++.|+++|+.+++.|+++-+ |. ..+..+++.++|..-+.-
T Consensus 114 ~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~-----v~-t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 114 KALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN-----VA-TAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE-----EC-SHHHHHHHHHHTCSEEEE
T ss_pred HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee-----eC-CHHHHHHHHHcCCCEEEE
Confidence 3445689999886 222 35789999999998778876543 32 345566666666444443
No 149
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.23 E-value=1.8e+02 Score=20.84 Aligned_cols=49 Identities=16% Similarity=0.301 Sum_probs=32.6
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhh--CCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSR--HPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~--~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++|+. .++.|++... -.++......|.+.|
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t-----~~~~~~~~~~~~~~g 100 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLT-----AQGDISAKIAGFEAG 100 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEE-----CTTCHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEe-----cCCCHHHHHHHHhcC
Confidence 447887765 777889999999975 3456766443 455566666565555
No 150
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=21.98 E-value=2e+02 Score=19.88 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=24.9
Q ss_pred CCCeeEec---CC-ccHHHHHHHHHhhCCCCCeeecc
Q psy15130 166 GADFLMVK---PA-LPYLDIISEVKSRHPAYPLFVYQ 198 (263)
Q Consensus 166 GAD~ImVK---Pg-~~yLDII~~ik~~~~~~Pi~aYq 198 (263)
..|+|++- |+ ..-+++++++++..+..|++.+.
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s 86 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYIS 86 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEe
Confidence 47888875 54 67789999999987677766543
No 151
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=21.98 E-value=1.2e+02 Score=21.52 Aligned_cols=49 Identities=14% Similarity=0.324 Sum_probs=31.5
Q ss_pred cCCCeeEec---C-CccHHHHHHHHHh--hCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---P-ALPYLDIISEVKS--RHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---P-g~~yLDII~~ik~--~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- | +..-+++++++++ ..++.|++.+- -..+......+.+.|
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls-----~~~~~~~~~~~~~~g 103 (140)
T 3lua_A 49 DSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIAT-----KSDNPGYRHAALKFK 103 (140)
T ss_dssp CCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEE-----SCCCHHHHHHHHHSC
T ss_pred CCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEe-----CCCCHHHHHHHHHcC
Confidence 347888876 4 4557889999998 66677866443 444445555554443
No 152
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=21.94 E-value=1.5e+02 Score=24.35 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=28.4
Q ss_pred ccccchhHHHHHHHhchhcCCCeeEe-------cCCccHHHHHHHHHhhCCCCCee
Q psy15130 147 TNEFHCIARCIAQARDVSQGADFLMV-------KPALPYLDIISEVKSRHPAYPLF 195 (263)
Q Consensus 147 ~yq~~~~~~~~e~~~Di~EGAD~ImV-------KPg~~yLDII~~ik~~~~~~Pi~ 195 (263)
.|. ++.+..++. .+.|||.|-+ .+...+ +.++++++.+ +.|+.
T Consensus 30 ~~~-d~~~~a~~~---~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~-~ipv~ 79 (244)
T 1vzw_A 30 SYG-SPLEAALAW---QRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM-DIKVE 79 (244)
T ss_dssp BCC-CHHHHHHHH---HHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC-SSEEE
T ss_pred ecC-CHHHHHHHH---HHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc-CCcEE
Confidence 444 554442222 2479999765 355667 9999999987 78855
No 153
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=21.92 E-value=2.1e+02 Score=25.98 Aligned_cols=112 Identities=10% Similarity=0.116 Sum_probs=61.6
Q ss_pred eCCCcccccccccccchhchHHHHHHHHhH-hhHhhcccccccCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccc
Q psy15130 61 VKSNLTNANVFHVSENFCTDTQLVMAYSRY-IICIALHDAWQTRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQL 139 (263)
Q Consensus 61 ~~dg~i~~Nd~tv~~~~~rla~~Al~~A~A-Ad~VAPsdmm~~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssg 139 (263)
++||.|| .+.+. +.+--+.++ +|-+.+...---.|+=..+=|...+|. .-.| ++.++.-.
T Consensus 39 ~~dg~ID------~~~l~---~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~g--rvpViaGv------ 99 (344)
T 2hmc_A 39 RQDRTPD------FDALV---RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKA--GIPVIVGT------ 99 (344)
T ss_dssp CTTSSBC------HHHHH---HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHT--TCCEEEEC------
T ss_pred CCCCCcC------HHHHH---HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCC--CCcEEEec------
Confidence 5678887 34444 444455566 777665554433345555566666666 1122 45555432
Q ss_pred cccccccccccchhHHHHHHHhchhcCCCeeEecCCcc--------HHHHHHHHHh-hCCCCCeeecccc
Q psy15130 140 NFLKHVQTNEFHCIARCIAQARDVSQGADFLMVKPALP--------YLDIISEVKS-RHPAYPLFVYQER 200 (263)
Q Consensus 140 PFRd~~~~yq~~~~~~~~e~~~Di~EGAD~ImVKPg~~--------yLDII~~ik~-~~~~~Pi~aYqER 200 (263)
...+-.+.+..++.-.+-|||.+++=|=.. ..+-.+++.+ .. ++|++-|+-+
T Consensus 100 --------g~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~-~lPiilYn~P 160 (344)
T 2hmc_A 100 --------GAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAP-EIPAVIYNSP 160 (344)
T ss_dssp --------CCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHST-TSCEEEEEBG
T ss_pred --------CCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCC-CCcEEEEecC
Confidence 112223332323333346999988855332 2345566777 55 7999999944
No 154
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=21.62 E-value=3.2e+02 Score=24.64 Aligned_cols=81 Identities=14% Similarity=-0.038 Sum_probs=44.2
Q ss_pred chhHHHHHHHhchhcCCCee-EecC------Cc-----cHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 151 HCIARCIAQARDVSQGADFL-MVKP------AL-----PYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 151 ~~~~~~~e~~~Di~EGAD~I-mVKP------g~-----~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
+......|++.=++.|||=| ||-+ |- ...+-|+++++..++.|+=+.-|-+.- .+.+.++.|++..
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L--~d~e~i~~A~~ia 181 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL--KTEDLIIKTTLAV 181 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH--CSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC--CcHHHHHHHHHHH
Confidence 34445568888888999876 3322 21 223445555555544452111111111 2344466677666
Q ss_pred HHhhccCCCCCccccccccccc
Q psy15130 219 LEKIAEDPSSGSCSNVSYALRY 240 (263)
Q Consensus 219 l~kia~dp~ags~l~iSY~~l~ 240 (263)
. .+|++...+-.|-.
T Consensus 182 ~-------eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 182 L-------NGNADFIKTSTGKV 196 (281)
T ss_dssp H-------TTTCSEEECCCSCS
T ss_pred H-------HhCCCEEEeCCCCC
Confidence 5 58999988775554
No 155
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=21.53 E-value=70 Score=28.90 Aligned_cols=95 Identities=14% Similarity=0.172 Sum_probs=54.7
Q ss_pred HHHHHHHhH-hhHhhcccccc-----------cCCCcccchhHHHHHHHHHhCCCCCceeeeeecccccccccccccccc
Q psy15130 82 QLVMAYSRY-IICIALHDAWQ-----------TRPIQTSATHIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNE 149 (263)
Q Consensus 82 ~~Al~~A~A-Ad~VAPsdmm~-----------~~Psdm~DGrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq 149 (263)
+.+-.+.++ |+.|---|-.. +-|-+-+-.||+++|++-+. +||+=..++..
T Consensus 98 ~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~-----------------~~~~i~aRtda 160 (295)
T 1xg4_A 98 RTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTD-----------------PDFVIMARTDA 160 (295)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSS-----------------TTSEEEEEECC
T ss_pred HHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccC-----------------CCcEEEEecHH
Confidence 455566677 77776555420 12333344566666666541 33432222221
Q ss_pred c---chhHHHHHHHhchhcCCCeeEecCCccHHHHHHHHHhhCCCCCee
Q psy15130 150 F---HCIARCIAQARDVSQGADFLMVKPALPYLDIISEVKSRHPAYPLF 195 (263)
Q Consensus 150 ~---~~~~~~~e~~~Di~EGAD~ImVKPg~~yLDII~~ik~~~~~~Pi~ 195 (263)
. ...+.+.....=.+-|||+|.+. |.+-.+.++++.+.. ..|++
T Consensus 161 ~~~~gl~~ai~ra~ay~eAGAd~i~~e-~~~~~~~~~~i~~~~-~iP~~ 207 (295)
T 1xg4_A 161 LAVEGLDAAIERAQAYVEAGAEMLFPE-AITELAMYRQFADAV-QVPIL 207 (295)
T ss_dssp HHHHCHHHHHHHHHHHHHTTCSEEEET-TCCSHHHHHHHHHHH-CSCBE
T ss_pred hhhcCHHHHHHHHHHHHHcCCCEEEEe-CCCCHHHHHHHHHHc-CCCEE
Confidence 1 12334444555566899999886 567789999999987 58854
No 156
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=21.44 E-value=78 Score=22.57 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=29.8
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|++- |+..-+++++++++..++.|++.+. -..+......+.+.|
T Consensus 59 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s-----~~~~~~~~~~~~~~g 109 (135)
T 3snk_A 59 RPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVS-----DELTSEQTRVLVRMN 109 (135)
T ss_dssp CCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEE-----SCCCHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEe-----CCCCHHHHHHHHHcC
Confidence 36777664 5666678999999887677766443 334444554444433
No 157
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=21.34 E-value=50 Score=28.78 Aligned_cols=71 Identities=7% Similarity=-0.015 Sum_probs=43.6
Q ss_pred HHHHHHHHhH-hhHhhcc-cccccCCCcc-cc--hhHHHHHHHHHhCCCCCceeeeeecccccccccccccccccchhHH
Q psy15130 81 TQLVMAYSRY-IICIALH-DAWQTRPIQT-SA--THIKDIRQKTANLSDTHKRLLQCSKTLLQLNFLKHVQTNEFHCIAR 155 (263)
Q Consensus 81 a~~Al~~A~A-Ad~VAPs-dmm~~~Psdm-~D--GrI~aIR~aLd~~G~~~v~im~y~k~~ssgPFRd~~~~yq~~~~~~ 155 (263)
..||+.-|+| |++|||= +-+ .|. .| ..|+.|++.+++.|+.-+.+-++ ||..
T Consensus 113 ~~Qa~~Aa~AGa~yISPfvgRi----~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS--------~R~~----------- 169 (212)
T 3r8r_A 113 ANQALLAARAGATYVSPFLGRL----DDIGHNGLDLISEVKQIFDIHGLDTQIIAAS--------IRHP----------- 169 (212)
T ss_dssp HHHHHHHHHHTCSEEEEBHHHH----HHTTSCHHHHHHHHHHHHHHHTCCCEEEEBS--------CCSH-----------
T ss_pred HHHHHHHHHcCCeEEEeccchh----hhcCCChHHHHHHHHHHHHHcCCCCEEEEec--------CCCH-----------
Confidence 4699999999 9999981 000 000 12 25788889999999843332222 3321
Q ss_pred HHHHHhchhcCCCeeEecCC
Q psy15130 156 CIAQARDVSQGADFLMVKPA 175 (263)
Q Consensus 156 ~~e~~~Di~EGAD~ImVKPg 175 (263)
.++..=..-|||.+-+-|.
T Consensus 170 -~~v~~~a~~G~d~~Tip~~ 188 (212)
T 3r8r_A 170 -QHVTEAALRGAHIGTMPLK 188 (212)
T ss_dssp -HHHHHHHHTTCSEEEECHH
T ss_pred -HHHHHHHHcCCCEEEcCHH
Confidence 2222223589999988886
No 158
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=21.14 E-value=1.3e+02 Score=20.95 Aligned_cols=34 Identities=12% Similarity=0.312 Sum_probs=25.4
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhh--CCCCCeeecc
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSR--HPAYPLFVYQ 198 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~--~~~~Pi~aYq 198 (263)
...|+|++- |+..-+++++++++. .++.|++.+.
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s 84 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVS 84 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEE
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEE
Confidence 447888875 777889999999987 5566765443
No 159
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=21.05 E-value=70 Score=29.89 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=15.6
Q ss_pred HHHHhchhcCCCeeEecC
Q psy15130 157 IAQARDVSQGADFLMVKP 174 (263)
Q Consensus 157 ~e~~~Di~EGAD~ImVKP 174 (263)
-|+.+-++|||+||-.|+
T Consensus 132 gea~r~~~~Ga~~i~t~g 149 (330)
T 2yzr_A 132 GEAVRRIWEGAAMIRTKG 149 (330)
T ss_dssp HHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHhcCcceeeccC
Confidence 566777799999999999
No 160
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=20.94 E-value=1.7e+02 Score=27.76 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=39.5
Q ss_pred HhchhcCCCeeEecCCc----cHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHHHHhhc
Q psy15130 160 ARDVSQGADFLMVKPAL----PYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMILEKIA 223 (263)
Q Consensus 160 ~~Di~EGAD~ImVKPg~----~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~l~kia 223 (263)
..=++.|+|+|.+-.+. ..++.|+++|+.+++.|+++-+ |. ..+..+++.++|...+.
T Consensus 237 ~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~-----v~-t~e~a~~l~~aGaD~I~ 298 (496)
T 4fxs_A 237 KALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN-----VA-TAEGARALIEAGVSAVK 298 (496)
T ss_dssp HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE-----EC-SHHHHHHHHHHTCSEEE
T ss_pred HHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc-----cC-cHHHHHHHHHhCCCEEE
Confidence 34446799999885543 3679999999998889987644 22 23456666777655544
No 161
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=20.93 E-value=52 Score=29.63 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=23.8
Q ss_pred cccchhHHHHHHHhchhcCCCeeEecC
Q psy15130 148 NEFHCIARCIAQARDVSQGADFLMVKP 174 (263)
Q Consensus 148 yq~~~~~~~~e~~~Di~EGAD~ImVKP 174 (263)
...++...++.+++|++.|||+||+..
T Consensus 143 ~~~~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 143 KQLTIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 456778888999999999999999987
No 162
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.78 E-value=1.9e+02 Score=21.13 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=31.7
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhh--CCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSR--HPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~--~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
...|+|++- |+..-+++++++++. +++.|++.+. -..+......+.+.|
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s-----~~~~~~~~~~~~~~g 103 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLT-----ILSDPRDVVRSLECG 103 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEE-----CCCSHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEE-----CCCChHHHHHHHHCC
Confidence 347888876 677788999999986 2466766443 344445555555544
No 163
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=20.44 E-value=1.5e+02 Score=21.10 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=23.8
Q ss_pred cCCCeeEec---CCccHHHHHHHHHhhCCCCCeeec
Q psy15130 165 QGADFLMVK---PALPYLDIISEVKSRHPAYPLFVY 197 (263)
Q Consensus 165 EGAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aY 197 (263)
...|+|++- |+..=+++++++++..+..|++.+
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~ 78 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIII 78 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEE
Confidence 346887764 677778999999988666665543
No 164
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=20.25 E-value=1.3e+02 Score=23.43 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCCeeEec---CCccHHHHHHHHHhhCCCCCeeecccceeeccCchhHHHHHHHHH
Q psy15130 166 GADFLMVK---PALPYLDIISEVKSRHPAYPLFVYQERCITVSGHFEANEKAMEMI 218 (263)
Q Consensus 166 GAD~ImVK---Pg~~yLDII~~ik~~~~~~Pi~aYqERvItVSGEyami~aAa~~~ 218 (263)
..|+|+.- |+..=+++++++++..+..|++.+. ..++...+..+.+.|
T Consensus 51 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls-----~~~~~~~~~~~~~~G 101 (215)
T 1a04_A 51 DPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFS-----VSNHEEDVVTALKRG 101 (215)
T ss_dssp CCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEE-----CCCCHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEE-----CCCCHHHHHHHHHcC
Confidence 46887764 6667789999999887667766543 444445555455444
Done!