Query psy15131
Match_columns 529
No_of_seqs 264 out of 986
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:23:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obv_E Protein diaphanous homo 100.0 8.3E-99 3E-103 802.1 47.5 443 18-484 1-444 (457)
2 2j1d_G DAAM1, disheveled-assoc 100.0 7.1E-93 2.4E-97 764.3 43.9 447 13-486 1-454 (483)
3 4eah_A Formin-like protein 3, 100.0 3.7E-84 1.3E-88 680.2 39.5 384 11-433 3-390 (402)
4 1v9d_A Diaphanous protein homo 100.0 2.9E-78 9.8E-83 624.5 35.2 337 110-450 3-339 (340)
5 1ux5_A BNI1 protein; structura 100.0 2.3E-78 7.8E-83 641.0 27.2 375 20-431 2-406 (411)
6 4hpq_C ATG17, KLTH0D15642P; au 66.1 1.2E+02 0.0042 31.0 19.1 105 319-432 235-354 (413)
7 2pbd_V VAsp, vasodilator-stimu 64.3 2.8 9.7E-05 28.6 1.5 9 6-14 3-11 (43)
8 3obv_E Protein diaphanous homo 63.0 17 0.00058 38.0 8.0 91 328-428 283-381 (457)
9 3t98_B Nucleoporin NUP58/NUP45 61.5 43 0.0015 26.9 8.4 72 325-397 18-92 (93)
10 2v8f_C MDIA1, profilin IIA; al 51.5 6.8 0.00023 23.3 1.4 8 6-13 2-9 (26)
11 2p22_C Protein SRN2; endosome, 50.9 1E+02 0.0034 28.2 10.1 51 372-429 130-180 (192)
12 1v9d_A Diaphanous protein homo 41.9 90 0.0031 31.0 9.1 91 327-427 211-309 (340)
13 1cii_A Colicin IA; bacteriocin 38.8 99 0.0034 32.0 8.6 115 286-400 316-452 (602)
14 4fi5_A Nucleoprotein; structur 37.5 89 0.003 25.8 6.6 87 317-405 20-109 (113)
15 1wa7_B TIP, hypothetical 28.7 32.5 35 0.0012 20.3 2.4 11 9-19 11-21 (26)
16 2avr_X Adhesion A; antiparalle 31.7 2.3E+02 0.0078 23.7 11.8 84 322-425 5-89 (119)
17 2j1d_G DAAM1, disheveled-assoc 31.6 4.5E+02 0.016 27.2 14.1 90 320-418 300-397 (483)
18 1deq_A Fibrinogen (alpha chain 28.7 3.3E+02 0.011 27.4 10.4 111 205-348 53-163 (390)
19 1go3_F DNA-directed RNA polyme 24.4 58 0.002 26.7 3.5 45 134-178 43-88 (107)
20 3sjb_C Golgi to ER traffic pro 23.2 2.9E+02 0.0098 22.1 8.2 61 324-390 21-83 (93)
21 2q12_A DIP13 alpha, DCC-intera 22.2 4.8E+02 0.016 24.2 16.4 46 213-258 24-74 (265)
22 2lw1_A ABC transporter ATP-bin 21.8 2.9E+02 0.0097 21.5 7.8 23 321-343 24-46 (89)
23 4hpq_C ATG17, KLTH0D15642P; au 21.7 6.5E+02 0.022 25.6 12.6 32 359-390 308-342 (413)
24 2f3j_A RNA and export factor b 21.1 75 0.0026 28.2 3.9 13 469-481 22-34 (177)
25 2huj_A LIN2004 protein; hypoth 21.1 4E+02 0.014 22.9 8.4 26 356-381 51-76 (140)
26 3tq2_A KE1; parallel three hel 20.6 56 0.0019 20.4 1.9 21 189-209 14-34 (36)
No 1
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=8.3e-99 Score=802.06 Aligned_cols=443 Identities=44% Similarity=0.741 Sum_probs=404.4
Q ss_pred CCCCCCC-CCccccceecCCCCcccCccccccccccccCchhHHHHHHhccCCCCCCcCCccccccccchhhhhhhhhcc
Q psy15131 18 KKKWDVG-GIKRANWKTINTQKLSEKSFWVKVKEEELASPDILTGLAQKFSSKPANKKADDNVDKCGTLKRYWTARQRRT 96 (529)
Q Consensus 18 kk~~~p~-~lK~l~W~ki~~~~i~~~T~W~~~~e~~~~~~~~~~~lE~~F~~k~~~~~~~~~~~~~g~l~~~~~~~~r~~ 96 (529)
||+|+|+ +||+|||++|+++++.++|||.+++++++...++|..||.+|++++...+.....+ +|.
T Consensus 1 kk~~~P~~~mK~l~W~ki~~~~~~~~t~W~~~~e~~~~~~~~f~~Le~~F~~~~~~~~~~k~~~-~~~------------ 67 (457)
T 3obv_E 1 KKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTKTSKAKKDQE-GGE------------ 67 (457)
T ss_dssp -CCCCCSSCBCCCCCCEECTTTTCSSSSGGGCCGGGGCCTTHHHHHHHHTBCC---------------------------
T ss_pred CCCCCCCCCCcCCCceeCCccccCCCceeeeCccccccChhHHHHHHHHhcccccccccccccc-ccc------------
Confidence 7999999 99999999999988878999999999999888889999999998765432111000 000
Q ss_pred ccccCCccccccccccccceeecChhHHHHHHHHhhccCCCCCHHHHHHHHHccCCCCCCHHHHHHHHhcCCCHHHHHHH
Q psy15131 97 SKKADDNVDKCGTLKRVKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDTNILSGNVLEQLISYLPPPDQLQRL 176 (529)
Q Consensus 97 ~~~~~~~~~~~~~~kk~~~isvLD~kraqNi~I~L~~~~k~~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt~eE~~~l 176 (529)
. .+...+++++.|+|||++|||||+|+|+ +|++ |+++|+.+|++||.+.|+.+.|+.|++++||+||+..|
T Consensus 68 -----~--~~~~~~kk~~~v~lLD~kraqNi~I~L~-~lk~-~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l 138 (457)
T 3obv_E 68 -----E--KKSVQKKKVKELKVLDSKTAQNLSIFLG-SFRM-PYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKML 138 (457)
T ss_dssp ----------------CCCCSSSCHHHHHHHHHHHH-HHCC-CHHHHHHHHHHTCTTTCCHHHHHHHHHHCCCHHHHHHH
T ss_pred -----c--cccccccCCceeEecCHHHHhHHHHHHh-ccCC-CHHHHHHHHHhCCcccCCHHHHHHHHHhCCCHHHHHHH
Confidence 0 0112346788899999999999999999 9997 99999999999999999999999999999999999999
Q ss_pred HhhccCCCCCChhhHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHh
Q psy15131 177 KELSGDYANLTEAEQFAVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYM 256 (529)
Q Consensus 177 ~~~~~d~~~L~~aE~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~iGNym 256 (529)
++|.++.+.|++||||++.|+.||+|..||+||+|+.+|++.+.+|.+.|..|..||++|++|..|+.||++||++||||
T Consensus 139 ~~~~~d~~~L~~~EqF~~~l~~Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~m 218 (457)
T 3obv_E 139 SELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYM 218 (457)
T ss_dssp HTTTTSGGGSCHHHHHHHHHTSSTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccChhhcCHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcceeeeccchhhhhcccCCCCCchHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHH
Q psy15131 257 NSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIK 336 (529)
Q Consensus 257 N~gs~~g~A~GFkL~sL~KL~dtKs~d~k~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~~~~~l~~~l~ 336 (529)
|+|+++|+|+||+|+||.||.|||++|+++||||||+++|+++||++++|.+||.+|..|++||+++|..++.+|.+++.
T Consensus 219 N~g~~~g~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~ 298 (457)
T 3obv_E 219 NAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIA 298 (457)
T ss_dssp TTTSTTCSCSCBCGGGHHHHTTCBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCcCCCeeeEehHHHHHHHhhhcCCCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhhhhHHHHHHHHHH
Q psy15131 337 NLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSF 416 (529)
Q Consensus 337 ~l~~~l~~~~~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eFF~~~~~F~~~f 416 (529)
.++.+++....+ .++.|.|..+|.+|+..|..++..|+..+..|.+.|.+++.||||||+++++++||++|.+|+..|
T Consensus 299 ~v~~~l~~~~~~--~~~~d~f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~f 376 (457)
T 3obv_E 299 DVERDVQNFPAA--TDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMF 376 (457)
T ss_dssp HHHHHHHSCCCC--SSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 999999875433 567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccChHHHHHHHHhcCCCcc
Q psy15131 417 YQAWQENIKLREAEEKSIRVREAREKAENEKKDKAARKKALIDMTTDQTQQGVMDSLLEALQTGSAFT 484 (529)
Q Consensus 417 ~~A~~en~~~~e~eek~rr~~~~~~k~~~~k~~~~~~k~~~~~~~~~~~~~~v~D~Ll~~Lr~g~~f~ 484 (529)
++|++||++++|+|++.+|++++++++++++.+++++++.+++++++++++||||+||++||+|++|+
T Consensus 377 kkA~~eN~~r~e~eek~~r~~~a~e~~~~~~~e~~~~~~~~~~~~~~~~~~gv~D~Ll~~l~sg~~f~ 444 (457)
T 3obv_E 377 LQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFR 444 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCTTSCSCCCCHHHHHHHHHHHSTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccHHHHHHHHhcchhhh
Confidence 99999999999999999999999999999888888888888888888899999999999999999997
No 2
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=7.1e-93 Score=764.28 Aligned_cols=447 Identities=29% Similarity=0.502 Sum_probs=352.7
Q ss_pred CCCCCCCCCCCC-CCccccceecCCCCcccCccccccccccccCchhHHHHHHhccCCCCCCcC--Cccccccccchhhh
Q psy15131 13 LGLKPKKKWDVG-GIKRANWKTINTQKLSEKSFWVKVKEEELASPDILTGLAQKFSSKPANKKA--DDNVDKCGTLKRYW 89 (529)
Q Consensus 13 ~g~~pkk~~~p~-~lK~l~W~ki~~~~i~~~T~W~~~~e~~~~~~~~~~~lE~~F~~k~~~~~~--~~~~~~~g~l~~~~ 89 (529)
+|++||+.++|+ +||+|||++|+++++ .+|||+++++.++....++++||++|++++..... .....+
T Consensus 1 ~~~~~K~~~~P~~klK~l~W~ki~~~~~-~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~-------- 71 (483)
T 2j1d_G 1 LALKKKSIPQPTNALKSFNWSKLPENKL-EGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQ-------- 71 (483)
T ss_dssp -----CCCCCCSSCBCCCCCCCCCGGGC-SSSGGGGCCGGGHHHHSCHHHHHHHTBSBC---------------------
T ss_pred CCCCCCCCCCCCCCCCCcCceECCcccc-cCCccCcCCchhhccccCHHHHHHHHhhhcccccccccccccc--------
Confidence 489999999999 999999999998887 68999999987654445689999999976543210 000000
Q ss_pred hhhhhccccccCCccccccccccccceeecChhHHHHHHHHhhccCCCCCHHHHHHHHHccCC-CCCCHHHHHHHHhcCC
Q psy15131 90 TARQRRTSKKADDNVDKCGTLKRVKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDT-NILSGNVLEQLISYLP 168 (529)
Q Consensus 90 ~~~~r~~~~~~~~~~~~~~~~kk~~~isvLD~kraqNi~I~L~~~~k~~s~eei~~aI~~~D~-~~L~~e~l~~L~~~lP 168 (529)
+..+...+.....++++.++|||++|||||+|+|+ +|++ |+++|+.+|++||+ +.|+.+.|+.|++++|
T Consensus 72 --------k~~~s~~~~~~~~kk~~~v~lLD~kRaqNi~I~L~-~lk~-~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~P 141 (483)
T 2j1d_G 72 --------KEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLS-RLKL-SNDEIKRAILTMDEQEDLPKDMLEQLLKFVP 141 (483)
T ss_dssp ------------------------CCBCCSCHHHHHHHHHHHH-HHCC-CHHHHHHHHHTTSTTCCCCHHHHHHHHHSCC
T ss_pred --------ccccccccccccccCCCcceeCCHHHHHHHHHHHh-cCCC-CHHHHHHHHHccCccccCCHHHHHHHHHhCC
Confidence 00000000012234677899999999999999999 9997 99999999999999 9999999999999999
Q ss_pred CHHHHHHHHhhccCCCCCChhhHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Q psy15131 169 PPDQLQRLKELSGDYANLTEAEQFAVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQACEEVKQSKKLAKILEL 248 (529)
Q Consensus 169 t~eE~~~l~~~~~d~~~L~~aE~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~ 248 (529)
|+||+..|++|.+|.+.|++||||+++|+.||+|.+||+||+|+.+|++.+.+|.+.|..|..||++|++|..|+.||++
T Consensus 142 t~eE~~~l~~~~~d~~~L~~aEqFl~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~ 221 (483)
T 2j1d_G 142 EKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEV 221 (483)
T ss_dssp CHHHHHHHHTTTTCGGGBCHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHhccChhhcCHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcceeeeccchhhhhcccCC-CCCchHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHHH
Q psy15131 249 ILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDI-ENKTTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNS 327 (529)
Q Consensus 249 iL~iGNymN~gs~~g~A~GFkL~sL~KL~dtKs~-d~k~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~~ 327 (529)
||++|||||+| .+|+|+||+|+||.||.|||++ |+++||||||+++|+++||++++|.+||.+|..|++||+++|..+
T Consensus 222 IL~~GN~mN~g-~rg~A~GFkL~sL~KL~d~Ks~~d~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~ 300 (483)
T 2j1d_G 222 VLAFGNYMNKG-QRGNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKE 300 (483)
T ss_dssp HHHHHHHHSCS-SSCCCSCCCGGGGGGGGGSBCSSCTTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHH
T ss_pred HHHHhhhhccC-CCCCceeeehHHHHhhhhcccCCCCCccHHHHHHHHHHHhCchhhchHHHHhhHHHHhcCCHHHHHHH
Confidence 99999999999 7899999999999999999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhhhhH
Q psy15131 328 IRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFT 407 (529)
Q Consensus 328 ~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eFF~ 407 (529)
+.+|.+++..++.+++...... .+++|.|..+|.+|+..|..++..|+..+..+.+.|.+++.|||||++++++++||+
T Consensus 301 ~~~L~~~l~~v~~~l~~~~~~~-~~~~d~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~ 379 (483)
T 2j1d_G 301 ISTLRSGLKAVETELEYQKSQP-PQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFG 379 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 9999999999999998754321 357889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHhhhhccCCCCCCccChHHHHHHHHhcCCCcch
Q psy15131 408 DIKTFKDSFYQAWQENIKLREA-EEKSIRV-REAREKAENEKKDKAARKKALIDMTTDQTQQGVMDSLLEALQTGSAFTR 485 (529)
Q Consensus 408 ~~~~F~~~f~~A~~en~~~~e~-eek~rr~-~~~~~k~~~~k~~~~~~k~~~~~~~~~~~~~~v~D~Ll~~Lr~g~~f~~ 485 (529)
+|.+|+..|++|++||.+++++ |++++|+ +++..++++++ +|.+++. ..+++++||||+||++||+|.+|++
T Consensus 380 ~~~~F~~~f~~A~~en~~~~~~~e~eekr~~~e~~~~~~~~~-~r~~~~~-----~~~~~~~g~~D~Ll~~Lr~g~~f~~ 453 (483)
T 2j1d_G 380 IFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRER-ERKMRKA-----KENSEESGEFDDLVSALRSGEVFDK 453 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHHHHHHHHH-HHHHHHC------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccC-----CCCCcccccHHHHHHHHhCCCcccc
Confidence 9999999999999999874332 2222333 33322323332 3333331 2345788999999999999999998
Q ss_pred h
Q psy15131 486 E 486 (529)
Q Consensus 486 ~ 486 (529)
+
T Consensus 454 ~ 454 (483)
T 2j1d_G 454 D 454 (483)
T ss_dssp -
T ss_pred c
Confidence 8
No 3
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=3.7e-84 Score=680.17 Aligned_cols=384 Identities=24% Similarity=0.379 Sum_probs=336.9
Q ss_pred CCCCCCCCCCCCCC-CCccccceecCCCCcccCccccccccccccCchhHHHHHHhccCCCCCCcCCccccccccchhhh
Q psy15131 11 LPLGLKPKKKWDVG-GIKRANWKTINTQKLSEKSFWVKVKEEELASPDILTGLAQKFSSKPANKKADDNVDKCGTLKRYW 89 (529)
Q Consensus 11 ~p~g~~pkk~~~p~-~lK~l~W~ki~~~~i~~~T~W~~~~e~~~~~~~~~~~lE~~F~~k~~~~~~~~~~~~~g~l~~~~ 89 (529)
+|+|++|||.++|+ +||+|||++|+++++ .+|||.++++..+....++++||++|+++...........+
T Consensus 3 ~~~~~~~Kk~~~~k~kmk~l~W~kl~~~~i-~~Tiw~~~~~~~~~~~ld~~~~E~lF~~k~~~~~~~~~~~k-------- 73 (402)
T 4eah_A 3 GLSAIRIKKPIKTKFRLPVFNWTALKPNQI-NGTVFSELDDEKILEDLDLDRFEELFKTKAQGPALDLICSK-------- 73 (402)
T ss_dssp -------CCCCCCSSCCCCCCCCEECHHHH-TTSTTSSCCTTSCSSTTTHHHHHHHSCCCC-------------------
T ss_pred CCCCCCCCCCCCCCCCCCCcCceeCChHhc-cCccccCCchhhhccccCHHHHHHHHhhcccCCccccchhc--------
Confidence 68999999999999 999999999999887 58999999988776666789999999976543211000000
Q ss_pred hhhhhccccccCCccccccccccccceeecChhHHHHHHHHhhccCCCCCHHHHHHHHHccCCCCCCHHHHHHHHhcCCC
Q psy15131 90 TARQRRTSKKADDNVDKCGTLKRVKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDTNILSGNVLEQLISYLPP 169 (529)
Q Consensus 90 ~~~~r~~~~~~~~~~~~~~~~kk~~~isvLD~kraqNi~I~L~~~~k~~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt 169 (529)
.....+++++++|||++|||||+|+|+ +|++ |+++|+++|++||.+.|+.+.|+.|++++||
T Consensus 74 ----------------~k~~~k~~~~v~lLd~kra~Ni~I~L~-~l~~-~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt 135 (402)
T 4eah_A 74 ----------------NKTAQKAASKVTLLEANRAKNLAITLR-KAGR-SAEEICRAIHTFDLQTLPVDFVECLMRFLPT 135 (402)
T ss_dssp -------------------------CBCSSCHHHHHHHHHHHH-HHCC-CHHHHHHHHHTTSCSCCCHHHHHHHHHTCCC
T ss_pred ----------------ccccccCCCceeeCCHHHHHHHHHHHh-cCCC-CHHHHHHHHHcCCcccCCHHHHHHHHhcCCC
Confidence 011234567899999999999999999 9997 9999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC---CCCCChhhHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q psy15131 170 PDQLQRLKELSGD---YANLTEAEQFAVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQACEEVKQSKKLAKIL 246 (529)
Q Consensus 170 ~eE~~~l~~~~~d---~~~L~~aE~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL 246 (529)
+||+..|++|.++ .+.|++||||+++|+.||+|.+||+||+|+.+|++.+.+|.+.|..+..||++|++|..|+.||
T Consensus 136 ~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL 215 (402)
T 4eah_A 136 EAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQML 215 (402)
T ss_dssp HHHHHHHHHHHHSSCCTTTBCHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhhccCCchhhccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 9999999999876 3789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcceeeeccchhhhhcccCCCCCchHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHH
Q psy15131 247 ELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQN 326 (529)
Q Consensus 247 ~~iL~iGNymN~gs~~g~A~GFkL~sL~KL~dtKs~d~k~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~ 326 (529)
++||++|||||+| .+|+|+||+|+||.||.|||++|+++||||||+++|+++||++++|.+||.+|..|++||+++|.+
T Consensus 216 ~~iL~~GN~mN~g-~rg~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l~~ 294 (402)
T 4eah_A 216 EIILALGNYMNSS-KRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSLENVLL 294 (402)
T ss_dssp HHHHHHHHHHHCS-SSCCCSCBCGGGGGSSSSSBCTTSSSBHHHHHHHHHHHHCGGGGTCSTTCCSHHHHHTCCHHHHHH
T ss_pred HHHHHHhhhccCC-CCCccceeeHHHHHHHHhccCCCCCccHHHHHHHHHHhhhHHHHHHhhhhhhHHHHhcCCHHHHHH
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhhhh
Q psy15131 327 SIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFF 406 (529)
Q Consensus 327 ~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eFF 406 (529)
++++|.+++..+++++... | ..+|..|+..|..++..|+..+..+.+.|.+++.||||||+++++++||
T Consensus 295 d~~~L~~~l~~~~~e~~~~---------d--~~~l~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgedpk~~~~~~fF 363 (402)
T 4eah_A 295 DVKELGRGMELIRRECSIH---------D--NSVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSVFF 363 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------C--CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhccc---------c--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 9999999999999877431 1 1479999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 407 TDIKTFKDSFYQAWQENIKLREAEEKS 433 (529)
Q Consensus 407 ~~~~~F~~~f~~A~~en~~~~e~eek~ 433 (529)
++|.+|+..|++|++||++++++|+..
T Consensus 364 ~~~~~F~~~fk~A~~en~~r~~~e~~~ 390 (402)
T 4eah_A 364 PVFVRFIRSYKEAEQENEARKKQEEVM 390 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988776543
No 4
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=2.9e-78 Score=624.55 Aligned_cols=337 Identities=46% Similarity=0.765 Sum_probs=297.7
Q ss_pred cccccceeecChhHHHHHHHHhhccCCCCCHHHHHHHHHccCCCCCCHHHHHHHHhcCCCHHHHHHHHhhccCCCCCChh
Q psy15131 110 LKRVKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDTNILSGNVLEQLISYLPPPDQLQRLKELSGDYANLTEA 189 (529)
Q Consensus 110 ~kk~~~isvLD~kraqNi~I~L~~~~k~~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt~eE~~~l~~~~~d~~~L~~a 189 (529)
+||+++++|||++|||||+|+|+ +|++ |+++|+.+|++||.+.|+.+.|+.|++++||+||+..|++|.++.+.|++|
T Consensus 3 kkk~~~i~vLD~kraqNi~I~L~-~~k~-~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~ 80 (340)
T 1v9d_A 3 KKKVKELKVLDSKTAQNLSIFLG-SFRM-PYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAES 80 (340)
T ss_dssp ---CCCCSSSCHHHHHHHHHHHH-HHCC-CHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHH
T ss_pred CCCCCeeeecCHHHHhHHHHHHh-hcCC-CHHHHHHHHHhCCcccCCHHHHHHHHccCCCHHHHHHHHHhhCChhhcCHH
Confidence 35778899999999999999999 9997 999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHhcCCCCCCcceeee
Q psy15131 190 EQFAVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFE 269 (529)
Q Consensus 190 E~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~iGNymN~gs~~g~A~GFk 269 (529)
|||++.|+.||+|..||+||+|+.+|++.+.++.+.|..+..||++|++|+.|+.||++||++|||||+|+++|+|+||+
T Consensus 81 EqF~~~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFk 160 (340)
T 1v9d_A 81 EQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFN 160 (340)
T ss_dssp HHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC-----------------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhcccCCCCCchHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q psy15131 270 INFLTKLSSTKDIENKTTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAP 349 (529)
Q Consensus 270 L~sL~KL~dtKs~d~k~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~~~~~l~~~l~~l~~~l~~~~~~~ 349 (529)
|+||.||.||||+|+++||||||++++++++|++++|.+||.+|..|++||+++|..++.+|.+++..++.+++.....
T Consensus 161 L~sL~KL~d~Ks~d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~~~~- 239 (340)
T 1v9d_A 161 ISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAA- 239 (340)
T ss_dssp -CCHHHHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred hHHHHhhhhhcCCCCCccHHHHHHHHHHHhCchhccchhHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999865332
Q ss_pred CCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 350 VANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREA 429 (529)
Q Consensus 350 ~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eFF~~~~~F~~~f~~A~~en~~~~e~ 429 (529)
.+++|.|..+|.+|+..|..++..|+..+..+.+.|.+++.||||||+++++++||++|.+|+..|++|++||.+++++
T Consensus 240 -~~~~d~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r~e~ 318 (340)
T 1v9d_A 240 -TDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRET 318 (340)
T ss_dssp -SSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy15131 430 EEKSIRVREAREKAENEKKDK 450 (529)
Q Consensus 430 eek~rr~~~~~~k~~~~k~~~ 450 (529)
|++.+|++++++++++++.+|
T Consensus 319 eek~~~~~~~~e~~~~~~~~~ 339 (340)
T 1v9d_A 319 EEKMRRAKLAKEKAEKERLEK 339 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999988888766444
No 5
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=2.3e-78 Score=640.96 Aligned_cols=375 Identities=22% Similarity=0.368 Sum_probs=331.6
Q ss_pred CCCCC-CCccccceecCCCCcccCccccccccccccCc----hhHHHHHHhccCCCCCCcCCccccccccchhhhhhhhh
Q psy15131 20 KWDVG-GIKRANWKTINTQKLSEKSFWVKVKEEELASP----DILTGLAQKFSSKPANKKADDNVDKCGTLKRYWTARQR 94 (529)
Q Consensus 20 ~~~p~-~lK~l~W~ki~~~~i~~~T~W~~~~e~~~~~~----~~~~~lE~~F~~k~~~~~~~~~~~~~g~l~~~~~~~~r 94 (529)
.++|+ +||+|||++|++ + .+|||++++++++... +++++||++|++++..+. +
T Consensus 2 ~p~P~~klK~l~W~ki~~--~-~~tiW~~~~~~~~~~~l~~~~d~~~lE~lF~~~~~~~~---~---------------- 59 (411)
T 1ux5_A 2 YPRPHKKLKQLHWEKLDC--T-DNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSL---A---------------- 59 (411)
T ss_dssp CCCCSSCBCCCCCCCCSS--C-CSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHH---H----------------
T ss_pred CCCCCCCCCCcCcccCCC--C-CCCcCcCCccHHHHHhhhhhchHHHHHHHhcccccccc---c----------------
Confidence 35566 799999999997 4 7999999998766432 368999999998764221 0
Q ss_pred ccccccCCccccccccccccceeecChhHHHHHHHHhhccCCCCCHHHHHHHHHccCCCCCCH-HHHHH-----------
Q psy15131 95 RTSKKADDNVDKCGTLKRVKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDTNILSG-NVLEQ----------- 162 (529)
Q Consensus 95 ~~~~~~~~~~~~~~~~kk~~~isvLD~kraqNi~I~L~~~~k~~s~eei~~aI~~~D~~~L~~-e~l~~----------- 162 (529)
...+++++.++|||++|||||+|+|+ +|+.+|+++|+++|++||.++|+. +.++.
T Consensus 60 ------------~~k~~~~~~v~lLd~kraqNi~I~L~-~~~~~~~~ei~~ai~~~D~~~L~~~~lie~L~~~~~~ei~~ 126 (411)
T 1ux5_A 60 ------------SKRKEDLQKITFLSRDISQQFGINLH-MYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSV 126 (411)
T ss_dssp ------------HHHHHTTTSBCCSCHHHHHHHHHHTG-GGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCH
T ss_pred ------------ccccCCCCeeeecChHHHHHHHHHHH-hcCCCCHHHHHHHHHhcChhhcCHHHHHHHhchhHHHhhHH
Confidence 00124567799999999999999999 994349999999999999999984 33444
Q ss_pred -HH-hcCCCHHHHH------HHHhhccCCCCCChhhHHHHHHh-hh-cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 163 -LI-SYLPPPDQLQ------RLKELSGDYANLTEAEQFAVTIA-EI-KRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQA 232 (529)
Q Consensus 163 -L~-~~lPt~eE~~------~l~~~~~d~~~L~~aE~F~~~l~-~i-p~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A 232 (529)
|+ +++|+++|.+ .++.|.+|.+.|++||||+++|+ .| |+|.+||+||+|+.+|++.+.++.+.|..+..|
T Consensus 127 ~L~~~~~P~~~e~e~l~~~~~~~~~~~d~~~L~~~eqf~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A 206 (411)
T 1ux5_A 127 NLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKA 206 (411)
T ss_dssp HHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCchhHHHHHHHHHhhhccCChhhCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 6899888865 33456789999999999999986 79 568999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHhcCCCCCCcceeeeccchhhhhcccCCCCCchHHHHHHHHHHhhCCcccccccchhh
Q psy15131 233 CEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDTIEQKFPECLKFGDELLH 312 (529)
Q Consensus 233 ~~~l~~S~~l~~lL~~iL~iGNymN~gs~~g~A~GFkL~sL~KL~dtKs~d~k~TLLh~i~~~v~~~~pel~~f~~eL~~ 312 (529)
|++|++|++|+.||++||++|||||+|++ +|+||+|+||.||.|||++|+++||||||+++|+++||++++|.+||.+
T Consensus 207 ~~el~~S~~l~~lL~~iL~~GN~mN~g~~--~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~ 284 (411)
T 1ux5_A 207 VSALQESDNLRNVFNVILAVGNFMNDTSK--QAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEP 284 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHSCGGG--CCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHH
T ss_pred HHHHHhchHHHHHHHHHHHHhCcccCCCC--CeeEeehhHHHHHHHhhCCCCCccHHHHHHHHHHHhCcccccccchhhh
Confidence 99999999999999999999999999986 7999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 313 VDRAARVSTDVIQNSIRQMENNIKNLETDIQNCK--QAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLA 390 (529)
Q Consensus 313 v~~Askvsl~~l~~~~~~l~~~l~~l~~~l~~~~--~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~ 390 (529)
|..|++||+++|.+++++|.+++..++.+++... .+...+++|.|...|.+|+..|..++..|++.+..+.+.|.+++
T Consensus 285 v~~Aakv~~~~l~~d~~~L~~~l~~v~~~l~~~~~s~~~~~~~~d~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~ 364 (411)
T 1ux5_A 285 VLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLM 364 (411)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997632 22335788999999999999999999999999999999999999
Q ss_pred hhcccCCC-ccChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 391 EFYTFDKN-IYTLEEFFTDIKTFKDSFYQAWQENIKLREAEE 431 (529)
Q Consensus 391 ~yFgEd~~-~~~~~eFF~~~~~F~~~f~~A~~en~~~~e~ee 431 (529)
.||||||+ ++++++||++|.+|+..|++|++||.+++|+++
T Consensus 365 ~yfged~~~~~~~~~fF~~~~~F~~~f~~a~~en~~~~e~~~ 406 (411)
T 1ux5_A 365 HTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLAAEEEER 406 (411)
T ss_dssp HHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 578999999999999999999999998877654
No 6
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=66.09 E-value=1.2e+02 Score=31.03 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=55.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----
Q psy15131 319 VSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYT---- 394 (529)
Q Consensus 319 vsl~~l~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFg---- 394 (529)
..++.|.+|-.++..=++.++.-+... +.+...+..|+.........+......+.+.|..+..|+.
T Consensus 235 elleVv~~Da~EL~~V~~eL~~~~~~i---------~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~e~l~i~~~ 305 (413)
T 4hpq_C 235 NLFEIVERDDKDLAAINSLLQDAAIDV---------ASFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEYISVFEG 305 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcchhhHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 345666666666554444444332211 2244555666666666666666666666665555444421
Q ss_pred ---------cCCC-c-cChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 395 ---------FDKN-I-YTLEEFFTDIKTFKDSFYQAWQENIKLREAEEK 432 (529)
Q Consensus 395 ---------Ed~~-~-~~~~eFF~~~~~F~~~f~~A~~en~~~~e~eek 432 (529)
+.-- . -..++.......|...|+....|..+|+.-+++
T Consensus 306 i~e~l~~fk~~~~~~~~~~~~L~~~Y~~f~~aY~~lL~Ev~RRr~~~~~ 354 (413)
T 4hpq_C 306 ISALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAK 354 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000 0 012344444556777777777787777765443
No 7
>2pbd_V VAsp, vasodilator-stimulated phosphoprotein; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens}
Probab=64.29 E-value=2.8 Score=28.58 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=5.3
Q ss_pred CCCCCCCCC
Q psy15131 6 KPPDVLPLG 14 (529)
Q Consensus 6 ~~pp~~p~g 14 (529)
|||||+|.+
T Consensus 3 PP~PPlP~~ 11 (43)
T 2pbd_V 3 PPAPPLPAA 11 (43)
T ss_dssp CCCCCCCCC
T ss_pred CCcCCCCCC
Confidence 555666654
No 8
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=62.96 E-value=17 Score=38.05 Aligned_cols=91 Identities=8% Similarity=0.228 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHhccCC-CCCC-CchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhhh
Q psy15131 328 IRQMENNIKNLETDIQNCKQA-PVAN-ENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEF 405 (529)
Q Consensus 328 ~~~l~~~l~~l~~~l~~~~~~-~~~~-~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eF 405 (529)
+.+|..++..++..+...... .... +.|. -..|......-+...+..+..+...+..+..-|-+ .-+|
T Consensus 283 ~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~~----~d~f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~------l~~y 352 (457)
T 3obv_E 283 AENLQKSLDQMKKQIADVERDVQNFPAATDE----KDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKE------LGDY 352 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCCSST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHH
Confidence 345666666666666543221 0011 1111 12466666666777777777777777777766632 2344
Q ss_pred hH------HHHHHHHHHHHHHHHHHHHHH
Q psy15131 406 FT------DIKTFKDSFYQAWQENIKLRE 428 (529)
Q Consensus 406 F~------~~~~F~~~f~~A~~en~~~~e 428 (529)
|+ ...+|...|..-...-.+..+
T Consensus 353 Fgedp~~~~~~eFF~~~~~F~~~fkkA~~ 381 (457)
T 3obv_E 353 FVFDPKKLSVEEFFMDLHNFRNMFLQAVK 381 (457)
T ss_dssp TTCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 43 345666666666655544443
No 9
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=61.53 E-value=43 Score=26.92 Aligned_cols=72 Identities=14% Similarity=0.221 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCchh---HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q psy15131 325 QNSIRQMENNIKNLETDIQNCKQAPVANENDK---FLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDK 397 (529)
Q Consensus 325 ~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~---f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~ 397 (529)
+..+..++..|..++..|.....+....|.|- +...-..|+.-| .++..|.+..+.+++.|-.+..|+-.|.
T Consensus 18 e~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLA-a~l~~lH~~V~~~Ke~Yl~~rr~~~~d~ 92 (93)
T 3t98_B 18 EVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA-AQLQSIHENVKVLKEQYLSYRKMFLGDA 92 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34455666666666666544333222334332 233333566554 6888999999999999999999886653
No 10
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=51.53 E-value=6.8 Score=23.31 Aligned_cols=8 Identities=50% Similarity=0.804 Sum_probs=3.9
Q ss_pred CCCCCCCC
Q psy15131 6 KPPDVLPL 13 (529)
Q Consensus 6 ~~pp~~p~ 13 (529)
|||||+|.
T Consensus 2 PPPPplPg 9 (26)
T 2v8f_C 2 PPPPPLPG 9 (26)
T ss_pred cCCCCCCC
Confidence 44455554
No 11
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=50.92 E-value=1e+02 Score=28.18 Aligned_cols=51 Identities=14% Similarity=0.091 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCccChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 372 ITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREA 429 (529)
Q Consensus 372 ~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~eFF~~~~~F~~~f~~A~~en~~~~e~ 429 (529)
+..|+....+.++.-..+..-|++.... ..+.+|+..|+...+....|+++
T Consensus 130 ~~~L~~a~~e~eeeS~~l~~~F~~~~~e-------~dv~~Fl~~y~~~R~~yH~RreK 180 (192)
T 2p22_C 130 KKKLEQNTKKLDEESSQLETTTRSIDSA-------DDLDQFIKNYLDIRTQYHLRREK 180 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCCCCH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccc-------chHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666677777777777652111 35778888888877766555443
No 12
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=41.92 E-value=90 Score=30.95 Aligned_cols=91 Identities=9% Similarity=0.232 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCC--CCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccChhh
Q psy15131 327 SIRQMENNIKNLETDIQNCKQAP--VANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEE 404 (529)
Q Consensus 327 ~~~~l~~~l~~l~~~l~~~~~~~--~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~~~e 404 (529)
++..+..++..+++.+......- .....| .-..|......-+...+..+..+...+..+..-|.+ .-+
T Consensus 211 s~~~l~~~l~~l~~~~~~~~~~l~~~~~~~~----~~d~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~------l~~ 280 (340)
T 1v9d_A 211 SAENLQKSLDQMKKQIADVERDVQNFPAATD----EKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKE------LGD 280 (340)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCCCSS----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcccccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH
Confidence 35667777777777665432110 000111 113466666667777777777777777777776642 233
Q ss_pred hhH------HHHHHHHHHHHHHHHHHHHH
Q psy15131 405 FFT------DIKTFKDSFYQAWQENIKLR 427 (529)
Q Consensus 405 FF~------~~~~F~~~f~~A~~en~~~~ 427 (529)
||+ ...+|...|..-.....+..
T Consensus 281 yfged~~~~~~~~fF~~~~~F~~~f~~a~ 309 (340)
T 1v9d_A 281 YFVFDPKKLSVEEFFMDLHNFRNMFLQAV 309 (340)
T ss_dssp HTTCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 443 24556555555555444433
No 13
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=38.85 E-value=99 Score=31.97 Aligned_cols=115 Identities=11% Similarity=0.149 Sum_probs=59.5
Q ss_pred chHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHHHHHHHHHhccCC------CCCCCchhHHh
Q psy15131 286 TTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQA------PVANENDKFLE 359 (529)
Q Consensus 286 ~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~~~~~l~~~l~~l~~~l~~~~~~------~~~~~~D~f~~ 359 (529)
.+-|+|-+.++....|-+..-++++..+..|.--+.+.|.+-+.+.+..+..++..++..+.. ...+..|....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~ve~~Kki~naevae~~~lrQRlddArNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a 395 (602)
T 1cii_A 316 HSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNA 395 (602)
T ss_dssp SCHHHHHHHTSCCCCSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhcCCCCcchhhhhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778777887888877666677777766653344444444444444444444333211000 00111222111
Q ss_pred h------H-------HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcccCCCcc
Q psy15131 360 I------M-------EPFAKEV---RQKITLLSNMSKNMMTLYGDLAEFYTFDKNIY 400 (529)
Q Consensus 360 ~------m-------~~Fl~~a---~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~ 400 (529)
. + ..-+.+. ..+...+++-.+-+-..|+++.++||+-.+.+
T Consensus 396 ~~kek~~~~n~~a~~~~KiAE~KrK~dE~~aIKDAVkfTAdFykkIsEkyGeKykkI 452 (602)
T 1cii_A 396 LLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGAKAEQL 452 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 1111111 22444566667777788999999999865543
No 14
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=37.53 E-value=89 Score=25.82 Aligned_cols=87 Identities=11% Similarity=0.121 Sum_probs=34.4
Q ss_pred hccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy15131 317 ARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIM---EPFAKEVRQKITLLSNMSKNMMTLYGDLAEFY 393 (529)
Q Consensus 317 skvsl~~l~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m---~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yF 393 (529)
..++++.|+.+++..+..|.....-|......-..+|+|-=...+ ..-+...+.++..|+.++......-+.....
T Consensus 20 ~~~~ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~~Vs~lq~KiaeLKrqLAd~va~~k~~~k~- 98 (113)
T 4fi5_A 20 GSMTMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDELKRQLADRIATGKNLGKE- 98 (113)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC-
Confidence 357899999998888877765554443321110124555322222 2233344445555555444444333332222
Q ss_pred ccCCCccChhhh
Q psy15131 394 TFDKNIYTLEEF 405 (529)
Q Consensus 394 gEd~~~~~~~eF 405 (529)
-||..+.|++-
T Consensus 99 -~DPTG~EpDDH 109 (113)
T 4fi5_A 99 -QDPTGVEPGDH 109 (113)
T ss_dssp ------------
T ss_pred -CCCCCCCCccc
Confidence 35555555543
No 15
>1wa7_B TIP, hypothetical 28.7 kDa protein in DHFR 3'region (ORF1); SH3 domain, ligand, tyrosine kinase, signal transduction, LYN; NMR {Saimiriine herpesvirus 2}
Probab=32.54 E-value=35 Score=20.31 Aligned_cols=11 Identities=18% Similarity=0.265 Sum_probs=5.4
Q ss_pred CCCCCCCCCCC
Q psy15131 9 DVLPLGLKPKK 19 (529)
Q Consensus 9 p~~p~g~~pkk 19 (529)
||-|..|-.|.
T Consensus 11 PpRPaNLG~~q 21 (26)
T 1wa7_B 11 PPRPANLGERQ 21 (26)
T ss_dssp CCCTTSTTTSC
T ss_pred CCCcccccccc
Confidence 55555554443
No 16
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=31.74 E-value=2.3e+02 Score=23.72 Aligned_cols=84 Identities=12% Similarity=0.210 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccC
Q psy15131 322 DVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYT 401 (529)
Q Consensus 322 ~~l~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgEd~~~~~ 401 (529)
.+|...++.|...+..|... ++.+| ..-..-.+.|...+.....++..+...+..+-. +.
T Consensus 5 ~~V~s~l~~LEaeyq~L~~k-----------E~qry-nqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~--------~~ 64 (119)
T 2avr_X 5 ASLVGELQALDAEYQNLANQ-----------EEARF-NEERAQADAARQALAQNEQVYNELSQRAQRLQA--------EA 64 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HT
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------Hh
Confidence 45666667776666665441 11223 335566778888888888888888888888754 12
Q ss_pred hhhhhH-HHHHHHHHHHHHHHHHHH
Q psy15131 402 LEEFFT-DIKTFKDSFYQAWQENIK 425 (529)
Q Consensus 402 ~~eFF~-~~~~F~~~f~~A~~en~~ 425 (529)
...||+ .+...+..|+.+.+++.+
T Consensus 65 ~~~~yK~eY~~L~KkYk~~~~~Ld~ 89 (119)
T 2avr_X 65 NTRFYKSQYQELASKYEDALKKLEA 89 (119)
T ss_dssp TSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 224444 366677777777766544
No 17
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=31.64 E-value=4.5e+02 Score=27.17 Aligned_cols=90 Identities=10% Similarity=0.250 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCC-CCchhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hh
Q psy15131 320 STDVIQNSIRQMENNIKNLETDIQNCKQA-PVA-NENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDL------AE 391 (529)
Q Consensus 320 sl~~l~~~~~~l~~~l~~l~~~l~~~~~~-~~~-~~~D~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l------~~ 391 (529)
++..|...+..++..+......- ..+ +.. ..-..|......-+......+..+...+..+..-|.+= -.
T Consensus 300 ~~~~L~~~l~~v~~~l~~~~~~~---~~~~d~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~ 376 (483)
T 2j1d_G 300 EISTLRSGLKAVETELEYQKSQP---PQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDE 376 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSC---CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHH
Confidence 45677777777777776654211 011 000 11234777777777777778888888888887777542 23
Q ss_pred hcccCCCccChhhhhHHHHHHHHHHHH
Q psy15131 392 FYTFDKNIYTLEEFFTDIKTFKDSFYQ 418 (529)
Q Consensus 392 yFgEd~~~~~~~eFF~~~~~F~~~f~~ 418 (529)
||+ ...+|...|..-..+..+
T Consensus 377 fF~------~~~~F~~~f~~A~~en~~ 397 (483)
T 2j1d_G 377 FFG------IFDQFLQAVSEAKQENEN 397 (483)
T ss_dssp HHH------HHHHHHHHHHHHHHHHHH
T ss_pred HHH------HHHHHHHHHHHHHHHHHH
Confidence 443 356777777776666554
No 18
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=28.67 E-value=3.3e+02 Score=27.41 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHhcCCCCCCcceeeeccchhhhhcccCCCC
Q psy15131 205 RLKSMHFKQHFQEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIEN 284 (529)
Q Consensus 205 Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~iGNymN~gs~~g~A~GFkL~sL~KL~dtKs~d~ 284 (529)
||+-++.+.+ .+++..|+.|..-...+ ++....+..++..+=|+|.. +.+...+
T Consensus 53 rLqg~Ldk~e-----r~~~~rIe~L~~~L~~~--s~s~~~~~~y~~~~~~~lk~-------------------~~~q~~d 106 (390)
T 1deq_A 53 RMKGLIDEVD-----QDFTSRINKLRDSLFNY--QKNSKDSNTLTKNIVELMRG-------------------DFAKANN 106 (390)
T ss_pred hHHHHHHHhh-----hhHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHH-------------------HHHhhcc
Q ss_pred CchHHHHHHHHHHhhCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q psy15131 285 KTTLLHYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQA 348 (529)
Q Consensus 285 k~TLLh~i~~~v~~~~pel~~f~~eL~~v~~Askvsl~~l~~~~~~l~~~l~~l~~~l~~~~~~ 348 (529)
..+...-+...|+++ +..|..--...-.++..|+..|..+...|.+|+.+++.+..+
T Consensus 107 ndn~~~e~s~eLe~~-------i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~ 163 (390)
T 1deq_A 107 NDNTFKQINEDLRSR-------IEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRS 163 (390)
T ss_pred chHHHHHHHHHHHHH-------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
No 19
>1go3_F DNA-directed RNA polymerase subunit F; transferase, transferase, transcription; 1.75A {Methanococcus jannaschii} SCOP: a.60.8.2
Probab=24.39 E-value=58 Score=26.75 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=29.8
Q ss_pred cCCCCCHHHHHHHHHccCCCCCCHHHHHHHHhcCCC-HHHHHHHHh
Q psy15131 134 SLKHYSYEEVKLSILRCDTNILSGNVLEQLISYLPP-PDQLQRLKE 178 (529)
Q Consensus 134 ~~k~~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt-~eE~~~l~~ 178 (529)
+|..+++++...++..+-.-.|+...+-.|..++|. .||+..|-+
T Consensus 43 kFsk~~~e~a~~l~e~L~~~~l~e~~a~~I~nl~P~t~dElraii~ 88 (107)
T 1go3_F 43 KFAKLDKEEAKKLVEELISLGIDEKTAVKIADILPEDLDDLRAIYY 88 (107)
T ss_dssp HHCCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHCCCSHHHHHHHST
T ss_pred HHhCCCHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCHHHHHHHHh
Confidence 555556665555544332334899999999999995 577776644
No 20
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=23.23 E-value=2.9e+02 Score=22.07 Aligned_cols=61 Identities=7% Similarity=0.032 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 324 IQNSIRQMENNIKNLETDIQNCKQAPVANENDKFL--EIMEPFAKEVRQKITLLSNMSKNMMTLYGDLA 390 (529)
Q Consensus 324 l~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~D~f~--~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~ 390 (529)
...+..+|..++..+..++... +..|.|. .++..-++....+++.+...+......|...+
T Consensus 21 ~a~~~~~lk~E~~~lk~E~~st------SaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~~ 83 (93)
T 3sjb_C 21 LSKKYLAKVKERHELKEFNNSI------SAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHL 83 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS------CTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHhcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678888888888887653 3456664 34555556666666666666666666665543
No 21
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=22.17 E-value=4.8e+02 Score=24.24 Aligned_cols=46 Identities=13% Similarity=-0.017 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhch-----hHHHHHHHHHHHHHHhcC
Q psy15131 213 QHFQEMYTDCHKNIINGKQACEEVKQSK-----KLAKILELILLMGNYMNS 258 (529)
Q Consensus 213 ~~f~~~~~~l~~~l~~l~~A~~~l~~S~-----~l~~lL~~iL~iGNymN~ 258 (529)
..|++.++.+...|..+..+|..+.++. ....+...+..+|++.++
T Consensus 24 ~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~ 74 (265)
T 2q12_A 24 GVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFP 74 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 3578888889999999999998876643 455666666666664433
No 22
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=21.76 E-value=2.9e+02 Score=21.49 Aligned_cols=23 Identities=13% Similarity=0.404 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy15131 321 TDVIQNSIRQMENNIKNLETDIQ 343 (529)
Q Consensus 321 l~~l~~~~~~l~~~l~~l~~~l~ 343 (529)
++.|...|..|...+..|+..|.
T Consensus 24 le~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 24 LEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566667777777777766663
No 23
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=21.68 E-value=6.5e+02 Score=25.60 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q psy15131 359 EIMEPFAKEVRQKIT---LLSNMSKNMMTLYGDLA 390 (529)
Q Consensus 359 ~~m~~Fl~~a~~~~~---~L~~~~~~~~~~~~~l~ 390 (529)
+.+..|.+.+...++ .|...|.....+|..++
T Consensus 308 e~l~~fk~~~~~~~~~~~~L~~~Y~~f~~aY~~lL 342 (413)
T 4hpq_C 308 ALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLL 342 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455554444433 33444555555555544
No 24
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=21.15 E-value=75 Score=28.17 Aligned_cols=13 Identities=8% Similarity=0.268 Sum_probs=8.7
Q ss_pred hHHHHHHHHhcCC
Q psy15131 469 VMDSLLEALQTGS 481 (529)
Q Consensus 469 v~D~Ll~~Lr~g~ 481 (529)
-+|++|..=|.+.
T Consensus 22 sLDdii~~~r~~~ 34 (177)
T 2f3j_A 22 SLDDIIKLNRNQR 34 (177)
T ss_dssp CHHHHHHHHHTCC
T ss_pred CHHHHHhhcccCC
Confidence 4799997655543
No 25
>2huj_A LIN2004 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.74A {Listeria innocua} SCOP: a.24.26.1
Probab=21.10 E-value=4e+02 Score=22.90 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=20.7
Q ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy15131 356 KFLEIMEPFAKEVRQKITLLSNMSKN 381 (529)
Q Consensus 356 ~f~~~m~~Fl~~a~~~~~~L~~~~~~ 381 (529)
.|...+.||.+.+...++.+......
T Consensus 51 DFy~eVKPf~d~vd~~l~eW~~~a~~ 76 (140)
T 2huj_A 51 DFYKDMKPFVDEAKRCADDFLELAIP 76 (140)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccchHHHHHHHHHHHHHHHHH
Confidence 48889999999999888877765443
No 26
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=20.55 E-value=56 Score=20.44 Aligned_cols=21 Identities=19% Similarity=0.412 Sum_probs=14.9
Q ss_pred hhHHHHHHhhhcChHHHHHHH
Q psy15131 189 AEQFAVTIAEIKRLLPRLKSM 209 (529)
Q Consensus 189 aE~F~~~l~~ip~~~~Rl~~l 209 (529)
-|||++.|.++..+.+++.++
T Consensus 14 keqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 14 KEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 478888888777777666543
Done!