RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15131
         (529 letters)



>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 332

 Score =  278 bits (711), Expect = 3e-90
 Identities = 153/335 (45%), Positives = 216/335 (64%), Gaps = 4/335 (1%)

Query: 113 VKALKVLDSKAAQNLSILLGGSLKHYSYEEVKLSILRCDTNILSGNVLEQLISYLPPPDQ 172
           VK LKVLDSK AQNLSI LG       Y+E+K  IL  +  +L+ ++++ LI  +P P+Q
Sbjct: 1   VKELKVLDSKTAQNLSIFLGSF--RMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQ 58

Query: 173 LQRLKELSGDYANLTEAEQFAVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIINGKQA 232
           L+ L EL  +Y +L E+EQF V +  + RL PRL ++ FK  F E   +    I++   A
Sbjct: 59  LKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAA 118

Query: 233 CEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYL 292
           CEE+++S+  + +LEL LL+GNYMN+GSRN GAFGF I+FL KL  TK  + K TLLH+L
Sbjct: 119 CEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFL 178

Query: 293 VDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVAN 352
            +  E   PE LKF DEL HV++A+RVS + +Q S+ QM+  I ++E D+QN   A   +
Sbjct: 179 AELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAA--TD 236

Query: 353 ENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTF 412
           E DKF+E M  F K+ +++   L  M  NM TLY +L +++ FD    ++EEFF D+  F
Sbjct: 237 EKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNF 296

Query: 413 KDSFYQAWQENIKLREAEEKSIRVREAREKAENEK 447
           ++ F QA +EN K RE EEK  R + A+EKAE E+
Sbjct: 297 RNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331


>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 411

 Score =  237 bits (606), Expect = 1e-73
 Identities = 89/449 (19%), Positives = 171/449 (38%), Gaps = 71/449 (15%)

Query: 16  KPKKKWDVGGIKRANWKTINTQKLSEKSFWVKVKEE----ELASPDILTGLAQKFSSKPA 71
           +P KK     +K+ +W+ ++    ++ S W   K E    +L    +L  L + F+++  
Sbjct: 4   RPHKK-----LKQLHWEKLDC---TDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREI 55

Query: 72  NKKADDNVDKCGTLKRYWTARQRRTSKKADDNVDKCGTLKRVKALKVLDSKAAQNLSILL 131
              A                     SK+           + ++ +  L    +Q   I L
Sbjct: 56  KSLA---------------------SKRK----------EDLQKITFLSRDISQQFGINL 84

Query: 132 GGSLKHYSYEEVKLSILRCDTNILSGNVLEQLIS--------------YLPPPDQLQRLK 177
                  S  ++   IL CD + L    + + +S              Y P     + ++
Sbjct: 85  H-MYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVR 143

Query: 178 ELS------GDYANLTEAEQF--AVTIAEIKRLLPRLKSMHFKQHFQEMYTDCHKNIING 229
            L        D  +L  A+Q    + +        R++++     ++  Y +    +   
Sbjct: 144 NLEDAKPPEKDPNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKV 203

Query: 230 KQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLL 289
            +A   +++S  L  +  +IL +GN+MN  S+   A GF+++ L +L+  KD  N  T L
Sbjct: 204 DKAVSALQESDNLRNVFNVILAVGNFMNDTSKQ--AQGFKLSTLQRLTFIKDTTNSMTFL 261

Query: 290 HYLVDTIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAP 349
           +Y+   +   +P    F  EL  V    +VS + + N  +    +I N+E  ++    + 
Sbjct: 262 NYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSD 321

Query: 350 V--ANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFD-KNIYTLEEFF 406
               +  DK L    P   E R+K  LL +  K  +  +  L   Y  D  + +    FF
Sbjct: 322 SSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFF 381

Query: 407 TDIKTFKDSFYQAWQENIKLREAEEKSIR 435
                F + + +A  +N+   E E   I+
Sbjct: 382 KKFADFINEYKKAQAQNLAAEEEERLYIK 410


>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli
           [TaxId: 562]}
          Length = 100

 Score = 27.1 bits (60), Expect = 2.1
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 432 KSIRVREA-REKAENEKKDKAARKKALI-DMTTDQTQQGVMDSLLEALQTGSAFTREQRR 489
           +S++ RE  R    ++   K A  KA+I D+      +      L+ L   S+ +R++ R
Sbjct: 3   QSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNR 62

Query: 490 KRQNDRPMGAERRAQLNRSRSR 511
            RQ  RP G  R+  L+R + R
Sbjct: 63  CRQTGRPHGFLRKFGLSRIKVR 84


>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
           {Burkholderia glumae [TaxId: 337]}
          Length = 280

 Score = 28.1 bits (62), Expect = 2.2
 Identities = 12/94 (12%), Positives = 28/94 (29%)

Query: 418 QAWQENIKLREAEEKSIRVREAREKAENEKKDKAARKKALIDMTTDQTQQGVMDSLLEAL 477
              +   +     ++    + A  +      D+   + A         +   M    EA 
Sbjct: 168 TPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAW 227

Query: 478 QTGSAFTREQRRKRQNDRPMGAERRAQLNRSRSR 511
           QT       +R +         +R A++ + R +
Sbjct: 228 QTRYQAYAAERDRIAAQGLAPQDRDARIAQLRQQ 261


>d1k3ya1 a.45.1.1 (A:81-222) Class alpha GST {Human (Homo sapiens),
           (a1-1) [TaxId: 9606]}
          Length = 142

 Score = 27.1 bits (59), Expect = 3.7
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 4/129 (3%)

Query: 328 IRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYG 387
           I      I +L   I      P   ++ K   I E            +         +  
Sbjct: 12  IDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGN 71

Query: 388 DL--AEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREAEEKSIRVREAREKAEN 445
            L  A+ +  +  +Y +EE  + + +      +A +  I      +K ++    R+   +
Sbjct: 72  KLSRADIHLVE-LLYYVEELDSSLIS-SFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 129

Query: 446 EKKDKAARK 454
           EK  + ARK
Sbjct: 130 EKSLEEARK 138


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.131    0.368 

Gapped
Lambda     K      H
   0.267   0.0630    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,892,766
Number of extensions: 89137
Number of successful extensions: 312
Number of sequences better than 10.0: 1
Number of HSP's gapped: 306
Number of HSP's successfully gapped: 23
Length of query: 529
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 439
Effective length of database: 1,171,896
Effective search space: 514462344
Effective search space used: 514462344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.2 bits)