Query psy15133
Match_columns 229
No_of_seqs 241 out of 1254
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 21:26:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00151 Lipase: Lipase; Inte 100.0 4.1E-70 8.9E-75 495.1 8.4 220 3-224 93-328 (331)
2 TIGR03230 lipo_lipase lipoprot 100.0 2.9E-64 6.3E-69 470.2 18.5 219 3-225 63-304 (442)
3 cd00707 Pancreat_lipase_like P 100.0 8.8E-64 1.9E-68 442.9 17.4 217 3-223 57-275 (275)
4 cd00741 Lipase Lipase. Lipase 99.3 6.4E-12 1.4E-16 101.3 8.9 110 38-151 9-126 (153)
5 PLN02965 Probable pheophorbida 99.1 1.9E-10 4.2E-15 99.2 7.3 82 8-98 26-108 (255)
6 PRK00870 haloalkane dehalogena 99.1 2.8E-10 6E-15 100.6 8.1 84 7-99 68-152 (302)
7 PLN02824 hydrolase, alpha/beta 99.1 3.1E-10 6.6E-15 99.6 8.4 80 11-99 54-139 (294)
8 PF12697 Abhydrolase_6: Alpha/ 99.0 1E-09 2.2E-14 89.0 8.7 80 10-98 22-102 (228)
9 TIGR02240 PHA_depoly_arom poly 99.0 1.1E-09 2.4E-14 95.4 8.2 78 11-98 50-127 (276)
10 PF00561 Abhydrolase_1: alpha/ 99.0 1.8E-09 3.9E-14 89.2 8.8 75 13-96 1-78 (230)
11 PRK11126 2-succinyl-6-hydroxy- 99.0 1.7E-09 3.8E-14 91.4 8.4 76 12-97 27-102 (242)
12 TIGR03343 biphenyl_bphD 2-hydr 99.0 1.3E-09 2.8E-14 94.2 6.7 81 8-97 56-136 (282)
13 PRK03592 haloalkane dehalogena 98.9 2.8E-09 6E-14 93.6 8.3 75 12-96 53-127 (295)
14 PRK10673 acyl-CoA esterase; Pr 98.9 3.5E-09 7.7E-14 90.0 8.2 76 11-97 41-116 (255)
15 PLN02298 hydrolase, alpha/beta 98.9 3.5E-09 7.6E-14 94.8 8.4 88 7-97 82-169 (330)
16 PLN02679 hydrolase, alpha/beta 98.9 4.2E-09 9.1E-14 96.3 8.6 79 11-98 113-192 (360)
17 PRK08775 homoserine O-acetyltr 98.9 3.6E-09 7.9E-14 95.7 7.8 78 8-97 95-173 (343)
18 TIGR01250 pro_imino_pep_2 prol 98.9 5.1E-09 1.1E-13 88.7 8.1 82 7-97 48-131 (288)
19 TIGR03611 RutD pyrimidine util 98.9 6.3E-09 1.4E-13 87.0 8.0 79 11-98 38-116 (257)
20 PRK03204 haloalkane dehalogena 98.9 5.1E-09 1.1E-13 92.5 7.7 78 11-97 59-136 (286)
21 PLN02578 hydrolase 98.9 7.3E-09 1.6E-13 94.3 8.4 79 11-99 111-189 (354)
22 TIGR02427 protocat_pcaD 3-oxoa 98.9 7.4E-09 1.6E-13 85.5 7.5 78 11-98 38-115 (251)
23 PLN02211 methyl indole-3-aceta 98.9 6.3E-09 1.4E-13 91.7 7.3 84 7-98 40-123 (273)
24 PLN02385 hydrolase; alpha/beta 98.8 8.4E-09 1.8E-13 93.4 8.2 88 8-98 111-198 (349)
25 PRK10349 carboxylesterase BioH 98.8 8.7E-09 1.9E-13 88.4 6.5 72 11-97 38-109 (256)
26 TIGR03056 bchO_mg_che_rel puta 98.8 1.6E-08 3.4E-13 86.5 7.6 78 12-98 54-131 (278)
27 PRK10749 lysophospholipase L2; 98.8 2E-08 4.4E-13 90.5 8.6 85 8-97 77-166 (330)
28 TIGR03695 menH_SHCHC 2-succiny 98.8 1.9E-08 4.1E-13 82.7 7.7 78 11-97 26-105 (251)
29 PLN03087 BODYGUARD 1 domain co 98.8 2.3E-08 4.9E-13 95.5 8.4 78 10-96 230-308 (481)
30 PHA02857 monoglyceride lipase; 98.8 2.4E-08 5.3E-13 86.5 8.0 85 7-96 47-131 (276)
31 PRK06489 hypothetical protein; 98.8 2.5E-08 5.5E-13 90.9 8.4 79 10-97 103-189 (360)
32 PRK07581 hypothetical protein; 98.8 2E-08 4.3E-13 90.3 7.3 86 8-98 67-160 (339)
33 PLN02894 hydrolase, alpha/beta 98.7 2.9E-08 6.3E-13 92.4 7.7 84 11-100 130-214 (402)
34 KOG4409|consensus 98.7 1.4E-08 3.1E-13 92.5 4.4 83 12-100 116-198 (365)
35 TIGR03101 hydr2_PEP hydrolase, 98.7 6.9E-08 1.5E-12 85.7 8.5 85 7-98 51-135 (266)
36 PLN03084 alpha/beta hydrolase 98.7 5.7E-08 1.2E-12 90.3 8.3 79 11-98 152-233 (383)
37 TIGR01392 homoserO_Ac_trn homo 98.7 7.8E-08 1.7E-12 87.3 8.3 82 7-97 67-162 (351)
38 TIGR01249 pro_imino_pep_1 prol 98.6 1E-07 2.2E-12 84.8 8.2 81 8-97 49-130 (306)
39 PRK14875 acetoin dehydrogenase 98.6 1.5E-07 3.2E-12 84.8 7.7 76 12-97 157-232 (371)
40 TIGR01738 bioH putative pimelo 98.6 1E-07 2.3E-12 78.5 6.2 73 11-98 29-101 (245)
41 PRK00175 metX homoserine O-ace 98.5 2.7E-07 5.8E-12 85.0 8.4 83 8-99 87-184 (379)
42 TIGR01836 PHA_synth_III_C poly 98.5 2.1E-07 4.5E-12 84.6 6.0 82 7-97 89-171 (350)
43 KOG4178|consensus 98.4 6.2E-07 1.3E-11 81.2 7.6 101 8-121 67-168 (322)
44 COG2267 PldB Lysophospholipase 98.4 9.4E-07 2E-11 79.4 8.1 87 7-98 56-143 (298)
45 PLN02652 hydrolase; alpha/beta 98.4 9.9E-07 2.1E-11 82.3 8.5 86 8-97 159-245 (395)
46 PLN00021 chlorophyllase 98.4 1.1E-06 2.4E-11 79.6 8.0 89 8-97 75-166 (313)
47 TIGR03100 hydr1_PEP hydrolase, 98.4 1.5E-06 3.2E-11 76.6 8.3 82 7-96 52-133 (274)
48 PRK05077 frsA fermentation/res 98.4 1.1E-06 2.5E-11 82.3 7.6 84 7-97 217-300 (414)
49 KOG2564|consensus 98.2 1.6E-06 3.5E-11 77.3 5.7 86 6-96 96-181 (343)
50 PLN02980 2-oxoglutarate decarb 98.2 2.9E-06 6.3E-11 91.5 8.5 78 11-97 1396-1480(1655)
51 COG0596 MhpC Predicted hydrola 98.2 5.1E-06 1.1E-10 67.1 7.3 74 13-98 51-124 (282)
52 PF05990 DUF900: Alpha/beta hy 98.2 4E-06 8.7E-11 72.9 6.7 107 13-125 49-164 (233)
53 PLN02511 hydrolase 98.2 3.1E-06 6.7E-11 78.5 5.9 80 9-94 126-207 (388)
54 PF00975 Thioesterase: Thioest 98.1 1.5E-05 3.2E-10 67.2 9.3 79 13-100 28-107 (229)
55 PRK11071 esterase YqiA; Provis 98.1 8.1E-06 1.7E-10 68.5 7.5 64 11-98 31-94 (190)
56 PF12695 Abhydrolase_5: Alpha/ 98.1 3.6E-06 7.7E-11 65.3 5.0 72 8-95 22-93 (145)
57 PRK05855 short chain dehydroge 98.1 1.1E-05 2.4E-10 76.6 8.0 77 10-93 49-127 (582)
58 KOG1454|consensus 98.1 1.4E-05 3.1E-10 72.7 8.2 77 12-97 86-163 (326)
59 PRK10985 putative hydrolase; P 98.1 8.4E-06 1.8E-10 73.4 6.4 86 7-96 82-167 (324)
60 PRK10566 esterase; Provisional 98.0 2.3E-05 4.9E-10 66.9 7.5 74 7-82 49-129 (249)
61 PRK06765 homoserine O-acetyltr 98.0 2.1E-05 4.6E-10 73.3 7.7 81 7-96 94-195 (389)
62 TIGR01838 PHA_synth_I poly(R)- 98.0 1.3E-05 2.8E-10 77.6 6.1 82 7-96 215-301 (532)
63 TIGR01607 PST-A Plasmodium sub 97.9 1.5E-05 3.3E-10 72.3 6.1 90 7-96 69-184 (332)
64 PF00326 Peptidase_S9: Prolyl 97.9 1.6E-05 3.4E-10 66.8 5.8 88 6-96 8-98 (213)
65 PRK13604 luxD acyl transferase 97.9 3.6E-05 7.8E-10 69.7 7.0 85 6-100 58-144 (307)
66 PLN02872 triacylglycerol lipas 97.9 1.7E-05 3.8E-10 74.1 4.8 88 8-100 103-200 (395)
67 KOG2382|consensus 97.8 3E-05 6.4E-10 70.3 5.7 87 4-97 72-159 (315)
68 TIGR02821 fghA_ester_D S-formy 97.8 7.3E-05 1.6E-09 65.8 7.6 39 56-96 134-172 (275)
69 PRK10162 acetyl esterase; Prov 97.8 4.3E-05 9.2E-10 68.9 6.1 82 10-97 110-195 (318)
70 TIGR01840 esterase_phb esteras 97.8 6.8E-05 1.5E-09 63.3 6.6 87 8-97 39-130 (212)
71 PF07819 PGAP1: PGAP1-like pro 97.7 9.5E-05 2.1E-09 63.9 7.4 83 11-95 38-121 (225)
72 KOG1455|consensus 97.7 0.00012 2.7E-09 65.8 8.1 90 8-100 78-167 (313)
73 TIGR00976 /NonD putative hydro 97.7 9.3E-05 2E-09 71.6 6.6 88 7-100 48-135 (550)
74 PLN02442 S-formylglutathione h 97.7 8.8E-05 1.9E-09 65.8 6.0 39 56-96 139-177 (283)
75 PRK07868 acyl-CoA synthetase; 97.6 9.9E-05 2.1E-09 76.2 7.1 82 7-95 94-175 (994)
76 PF06342 DUF1057: Alpha/beta h 97.6 0.00017 3.6E-09 64.6 7.3 82 7-98 57-138 (297)
77 smart00824 PKS_TE Thioesterase 97.5 0.00066 1.4E-08 55.0 8.5 81 11-100 24-105 (212)
78 PF10230 DUF2305: Uncharacteri 97.4 0.00065 1.4E-08 60.1 7.9 100 10-110 30-135 (266)
79 PF07859 Abhydrolase_3: alpha/ 97.4 0.00016 3.4E-09 60.2 3.3 81 8-96 25-109 (211)
80 PF02230 Abhydrolase_2: Phosph 97.2 0.0017 3.8E-08 54.9 8.2 84 36-125 83-166 (216)
81 COG1647 Esterase/lipase [Gener 97.1 0.0013 2.9E-08 57.0 6.8 83 6-97 36-118 (243)
82 PF06057 VirJ: Bacterial virul 97.1 0.00047 1E-08 58.5 4.0 82 7-97 24-107 (192)
83 PRK10252 entF enterobactin syn 97.1 0.0013 2.9E-08 68.8 8.0 79 11-98 1093-1172(1296)
84 PF05677 DUF818: Chlamydia CHL 97.1 0.0013 2.8E-08 60.4 6.6 69 9-81 168-236 (365)
85 TIGR03502 lipase_Pla1_cef extr 97.1 0.0016 3.4E-08 65.8 7.7 73 8-80 472-575 (792)
86 COG3208 GrsT Predicted thioest 97.1 0.00064 1.4E-08 59.6 4.1 124 11-143 32-166 (244)
87 COG3319 Thioesterase domains o 97.0 0.0014 3.1E-08 58.0 6.2 78 12-98 26-104 (257)
88 PRK11460 putative hydrolase; P 97.0 0.0017 3.6E-08 56.0 6.1 53 41-96 85-137 (232)
89 PLN02733 phosphatidylcholine-s 96.9 0.0015 3.3E-08 62.0 5.6 74 17-98 125-200 (440)
90 PF07224 Chlorophyllase: Chlor 96.9 0.0018 3.8E-08 57.7 5.3 87 10-97 71-157 (307)
91 COG0429 Predicted hydrolase of 96.8 0.0022 4.9E-08 58.6 5.7 70 8-81 100-170 (345)
92 TIGR01839 PHA_synth_II poly(R) 96.8 0.0029 6.3E-08 61.6 6.6 80 7-94 242-325 (560)
93 COG4782 Uncharacterized protei 96.7 0.0031 6.8E-08 58.2 6.1 109 11-124 145-261 (377)
94 PF01764 Lipase_3: Lipase (cla 96.7 0.0008 1.7E-08 52.5 2.0 65 59-123 63-130 (140)
95 PF11187 DUF2974: Protein of u 96.7 0.0022 4.7E-08 55.7 4.8 38 60-97 84-123 (224)
96 PF06500 DUF1100: Alpha/beta h 96.7 0.0025 5.4E-08 59.9 5.0 89 6-101 212-301 (411)
97 PF12740 Chlorophyllase2: Chlo 96.6 0.0039 8.6E-08 55.3 5.7 80 10-97 42-131 (259)
98 PF01674 Lipase_2: Lipase (cla 96.6 0.0018 3.9E-08 56.0 3.1 70 7-81 24-96 (219)
99 KOG1552|consensus 96.5 0.0041 8.9E-08 54.9 5.2 77 10-96 86-162 (258)
100 cd00519 Lipase_3 Lipase (class 96.4 0.0066 1.4E-07 51.8 5.7 26 57-82 125-150 (229)
101 COG0657 Aes Esterase/lipase [L 96.4 0.0062 1.3E-07 54.3 5.5 70 7-82 105-174 (312)
102 PF05728 UPF0227: Uncharacteri 96.3 0.0082 1.8E-07 50.6 5.4 38 58-100 57-94 (187)
103 TIGR01849 PHB_depoly_PhaZ poly 96.1 0.012 2.6E-07 55.4 6.3 78 5-93 124-204 (406)
104 KOG4627|consensus 96.1 0.014 3E-07 50.6 5.8 74 9-92 94-167 (270)
105 PF01738 DLH: Dienelactone hyd 96.1 0.016 3.5E-07 48.8 6.2 84 8-95 37-130 (218)
106 COG0400 Predicted esterase [Ge 96.0 0.01 2.2E-07 50.9 4.9 57 41-100 81-137 (207)
107 PTZ00472 serine carboxypeptida 96.0 0.019 4.2E-07 54.8 7.1 72 11-82 120-193 (462)
108 COG4757 Predicted alpha/beta h 95.9 0.0057 1.2E-07 53.7 2.9 73 6-81 51-126 (281)
109 PF08840 BAAT_C: BAAT / Acyl-C 95.9 0.02 4.4E-07 48.8 6.1 58 41-102 4-61 (213)
110 KOG3724|consensus 95.5 0.028 6E-07 56.6 6.2 84 10-94 130-217 (973)
111 PF02450 LCAT: Lecithin:choles 95.5 0.028 6.1E-07 52.4 5.9 72 12-96 82-159 (389)
112 PF00756 Esterase: Putative es 95.4 0.027 5.8E-07 48.0 5.0 49 45-96 101-149 (251)
113 PF06028 DUF915: Alpha/beta hy 95.4 0.03 6.5E-07 49.5 5.3 60 35-99 81-143 (255)
114 PLN02408 phospholipase A1 95.3 0.028 6E-07 52.3 5.1 65 60-124 200-265 (365)
115 KOG4391|consensus 95.1 0.0054 1.2E-07 53.5 -0.2 83 2-91 96-178 (300)
116 PF05057 DUF676: Putative seri 95.1 0.032 7E-07 47.7 4.6 47 35-82 54-100 (217)
117 PF05277 DUF726: Protein of un 95.0 0.011 2.3E-07 54.6 1.3 126 31-164 196-330 (345)
118 COG2021 MET2 Homoserine acetyl 94.6 0.091 2E-06 48.8 6.5 81 7-96 87-181 (368)
119 PF10503 Esterase_phd: Esteras 94.6 0.1 2.2E-06 45.2 6.3 48 41-91 79-126 (220)
120 PF06259 Abhydrolase_8: Alpha/ 94.6 0.092 2E-06 44.0 5.9 84 13-100 61-147 (177)
121 COG1075 LipA Predicted acetylt 94.6 0.044 9.5E-07 50.2 4.2 59 38-99 108-166 (336)
122 COG3243 PhaC Poly(3-hydroxyalk 94.5 0.053 1.1E-06 51.2 4.8 79 7-93 134-213 (445)
123 PLN02454 triacylglycerol lipas 94.4 0.073 1.6E-06 50.2 5.4 41 39-82 208-250 (414)
124 PF01083 Cutinase: Cutinase; 94.4 0.068 1.5E-06 44.6 4.7 64 11-80 38-101 (179)
125 PLN02802 triacylglycerol lipas 94.1 0.071 1.5E-06 51.4 4.7 64 61-124 331-395 (509)
126 PF02129 Peptidase_S15: X-Pro 94.0 0.16 3.5E-06 44.4 6.5 84 8-97 53-136 (272)
127 PRK04940 hypothetical protein; 94.0 0.15 3.2E-06 43.0 5.8 33 60-97 60-92 (180)
128 KOG1515|consensus 93.9 0.17 3.8E-06 46.5 6.8 91 9-105 120-215 (336)
129 PRK10439 enterobactin/ferric e 93.9 0.2 4.4E-06 47.1 7.4 40 56-97 284-323 (411)
130 COG0412 Dienelactone hydrolase 93.9 0.18 3.9E-06 43.8 6.5 88 7-98 49-147 (236)
131 PF06821 Ser_hydrolase: Serine 93.7 0.09 2E-06 43.6 4.2 53 39-98 39-92 (171)
132 PF03403 PAF-AH_p_II: Platelet 93.7 0.034 7.4E-07 51.8 1.8 39 56-97 224-262 (379)
133 PF12715 Abhydrolase_7: Abhydr 93.4 0.15 3.2E-06 47.7 5.3 79 7-89 155-252 (390)
134 PLN02310 triacylglycerol lipas 93.3 0.13 2.7E-06 48.6 4.8 63 60-124 209-273 (405)
135 PLN03037 lipase class 3 family 93.2 0.14 3.1E-06 49.5 5.1 65 60-124 318-383 (525)
136 PLN02847 triacylglycerol lipas 93.2 0.14 3.1E-06 50.3 5.1 34 58-91 249-282 (633)
137 PLN02571 triacylglycerol lipas 93.0 0.15 3.3E-06 48.1 5.0 22 61-82 227-248 (413)
138 PLN00413 triacylglycerol lipas 93.0 0.15 3.3E-06 48.9 4.9 24 58-81 282-305 (479)
139 PRK05371 x-prolyl-dipeptidyl a 92.9 0.46 1E-05 48.3 8.6 87 6-96 273-372 (767)
140 COG2945 Predicted hydrolase of 92.5 0.29 6.2E-06 41.9 5.5 82 8-97 56-138 (210)
141 KOG3101|consensus 92.5 0.035 7.6E-07 48.3 -0.1 55 40-96 121-175 (283)
142 KOG2385|consensus 92.4 0.12 2.5E-06 50.1 3.3 109 35-152 427-541 (633)
143 PF09752 DUF2048: Uncharacteri 92.4 0.37 7.9E-06 44.6 6.5 51 41-97 160-210 (348)
144 COG3946 VirJ Type IV secretory 92.4 0.11 2.3E-06 49.0 3.0 78 7-93 282-361 (456)
145 PLN02324 triacylglycerol lipas 92.1 0.24 5.3E-06 46.8 5.0 21 61-81 216-236 (415)
146 PF08237 PE-PPE: PE-PPE domain 91.8 1 2.2E-05 39.1 8.2 84 12-98 2-91 (225)
147 PLN02162 triacylglycerol lipas 91.8 0.25 5.5E-06 47.3 4.8 24 58-81 276-299 (475)
148 COG3509 LpqC Poly(3-hydroxybut 91.7 0.54 1.2E-05 42.6 6.5 76 5-82 84-166 (312)
149 PLN02753 triacylglycerol lipas 91.7 0.24 5.2E-06 48.1 4.5 66 59-124 311-383 (531)
150 PF03583 LIP: Secretory lipase 91.4 0.48 1E-05 42.4 5.9 84 10-99 24-112 (290)
151 KOG2984|consensus 90.8 0.16 3.4E-06 44.1 2.2 75 12-96 71-148 (277)
152 PF05448 AXE1: Acetyl xylan es 90.3 1.1 2.3E-05 40.9 7.2 85 9-97 106-209 (320)
153 COG3545 Predicted esterase of 90.2 0.53 1.2E-05 39.6 4.7 57 34-97 38-94 (181)
154 COG2819 Predicted hydrolase of 90.0 0.59 1.3E-05 41.7 5.1 41 55-97 132-172 (264)
155 PLN02761 lipase class 3 family 89.9 0.43 9.2E-06 46.4 4.4 23 60-82 294-316 (527)
156 PLN02934 triacylglycerol lipas 89.8 0.45 9.8E-06 46.1 4.5 24 58-81 319-342 (515)
157 cd00312 Esterase_lipase Estera 89.8 0.82 1.8E-05 43.2 6.3 40 55-94 171-210 (493)
158 PF00450 Peptidase_S10: Serine 89.7 0.95 2.1E-05 41.4 6.5 71 11-82 84-158 (415)
159 KOG1838|consensus 89.6 0.52 1.1E-05 44.5 4.7 61 9-76 151-214 (409)
160 PLN02719 triacylglycerol lipas 89.6 0.44 9.4E-06 46.2 4.2 23 60-82 298-320 (518)
161 PF12146 Hydrolase_4: Putative 89.2 0.54 1.2E-05 34.0 3.6 41 7-47 38-78 (79)
162 KOG2624|consensus 88.8 0.23 4.9E-06 46.9 1.7 54 41-97 145-199 (403)
163 KOG2112|consensus 88.1 1.1 2.3E-05 38.6 5.2 59 36-98 71-129 (206)
164 COG0627 Predicted esterase [Ge 87.5 0.9 1.9E-05 41.5 4.7 32 60-93 152-183 (316)
165 PF12048 DUF3530: Protein of u 86.9 2 4.3E-05 39.0 6.5 81 38-123 175-256 (310)
166 KOG1553|consensus 86.1 1.6 3.5E-05 40.8 5.5 63 12-82 268-333 (517)
167 COG1506 DAP2 Dipeptidyl aminop 86.1 0.9 2E-05 44.9 4.2 75 6-82 417-495 (620)
168 PF08538 DUF1749: Protein of u 85.3 1.5 3.3E-05 39.8 4.9 84 8-95 59-146 (303)
169 PF03096 Ndr: Ndr family; Int 85.1 3.3 7.1E-05 37.3 6.9 79 10-97 53-134 (283)
170 KOG3975|consensus 84.9 1.7 3.7E-05 38.8 4.8 70 39-111 91-161 (301)
171 COG4814 Uncharacterized protei 84.8 1.5 3.2E-05 39.2 4.4 59 37-100 116-177 (288)
172 PF10340 DUF2424: Protein of u 84.6 2.3 5.1E-05 39.7 5.9 75 12-96 154-234 (374)
173 KOG2369|consensus 84.5 1 2.2E-05 43.1 3.6 39 41-82 166-204 (473)
174 COG5153 CVT17 Putative lipase 84.3 0.88 1.9E-05 41.4 2.9 27 56-82 272-298 (425)
175 KOG4540|consensus 84.3 0.88 1.9E-05 41.4 2.9 27 56-82 272-298 (425)
176 KOG4667|consensus 82.8 1.6 3.5E-05 38.2 3.8 70 6-82 56-127 (269)
177 PLN02517 phosphatidylcholine-s 81.7 1.4 3.1E-05 43.6 3.4 37 41-80 197-233 (642)
178 KOG4569|consensus 79.8 1.9 4.1E-05 39.5 3.4 65 59-123 170-236 (336)
179 smart00037 CNX Connexin homolo 77.9 1.3 2.7E-05 27.2 1.1 26 137-164 9-34 (34)
180 KOG2931|consensus 76.3 8.1 0.00018 35.3 6.2 77 11-96 77-156 (326)
181 COG4188 Predicted dienelactone 75.0 3.1 6.8E-05 38.8 3.4 24 56-79 155-178 (365)
182 COG3150 Predicted esterase [Ge 72.4 9.9 0.00021 32.1 5.4 38 59-101 58-95 (191)
183 COG2272 PnbA Carboxylesterase 70.6 12 0.00025 36.3 6.2 43 55-98 175-218 (491)
184 KOG1551|consensus 70.2 5.5 0.00012 36.1 3.7 51 42-95 178-228 (371)
185 KOG2565|consensus 70.2 15 0.00033 34.7 6.6 69 13-90 189-257 (469)
186 PF04301 DUF452: Protein of un 67.8 5.8 0.00013 34.3 3.3 33 58-94 55-87 (213)
187 PLN03016 sinapoylglucose-malat 66.9 9.1 0.0002 36.4 4.7 70 11-82 114-187 (433)
188 KOG3847|consensus 66.5 2.6 5.7E-05 38.9 0.9 38 56-96 237-274 (399)
189 COG4099 Predicted peptidase [G 65.5 9 0.00019 35.3 4.1 46 44-92 253-299 (387)
190 PLN02213 sinapoylglucose-malat 65.5 18 0.0004 32.6 6.2 68 13-82 2-73 (319)
191 KOG2029|consensus 65.3 14 0.00031 36.8 5.7 62 10-74 476-540 (697)
192 COG2382 Fes Enterochelin ester 64.5 8.7 0.00019 34.9 3.8 38 58-97 175-212 (299)
193 PLN02633 palmitoyl protein thi 64.2 14 0.00031 33.8 5.1 34 60-93 94-127 (314)
194 COG1770 PtrB Protease II [Amin 63.5 11 0.00024 37.8 4.6 72 48-123 516-598 (682)
195 COG3571 Predicted hydrolase of 63.3 11 0.00024 31.7 4.0 36 56-93 85-120 (213)
196 PF07082 DUF1350: Protein of u 61.0 25 0.00054 31.2 6.0 67 9-82 44-112 (250)
197 PF14253 AbiH: Bacteriophage a 60.8 7 0.00015 33.8 2.5 20 58-77 233-252 (270)
198 PF02273 Acyl_transf_2: Acyl t 58.7 25 0.00055 31.5 5.6 71 6-81 51-122 (294)
199 COG2936 Predicted acyl esteras 56.1 29 0.00064 34.3 6.1 85 7-100 75-159 (563)
200 PF02089 Palm_thioest: Palmito 55.9 16 0.00035 32.8 4.0 77 11-93 36-112 (279)
201 PLN02209 serine carboxypeptida 55.3 23 0.0005 33.7 5.2 70 11-82 116-189 (437)
202 PRK10115 protease 2; Provision 54.6 31 0.00067 34.7 6.2 83 8-93 470-555 (686)
203 PLN02606 palmitoyl-protein thi 53.3 28 0.0006 31.8 5.1 34 60-93 95-128 (306)
204 PF05577 Peptidase_S28: Serine 52.7 71 0.0015 29.8 8.0 72 11-82 58-135 (434)
205 KOG4372|consensus 52.5 3.3 7.1E-05 39.1 -1.0 48 32-82 125-172 (405)
206 PF03959 FSH1: Serine hydrolas 50.9 14 0.0003 31.1 2.7 21 62-82 104-124 (212)
207 COG3458 Acetyl esterase (deace 47.9 28 0.0006 31.7 4.1 88 9-100 106-213 (321)
208 PF00135 COesterase: Carboxyle 46.7 12 0.00027 35.1 1.9 86 8-95 152-243 (535)
209 smart00827 PKS_AT Acyl transfe 46.1 36 0.00078 29.7 4.6 25 56-82 80-104 (298)
210 KOG1516|consensus 44.7 70 0.0015 30.6 6.8 26 54-79 189-214 (545)
211 PF11339 DUF3141: Protein of u 44.3 55 0.0012 32.3 5.8 54 35-92 117-170 (581)
212 PF11288 DUF3089: Protein of u 43.8 62 0.0014 27.8 5.6 38 40-80 78-115 (207)
213 KOG4840|consensus 42.4 29 0.00063 30.8 3.3 84 5-96 59-143 (299)
214 COG2939 Carboxypeptidase C (ca 40.8 22 0.00047 34.6 2.5 81 12-92 146-231 (498)
215 TIGR03131 malonate_mdcH malona 40.0 52 0.0011 28.9 4.7 23 60-82 76-98 (295)
216 PF00698 Acyl_transf_1: Acyl t 39.4 31 0.00068 30.7 3.3 25 58-82 82-106 (318)
217 cd07205 Pat_PNPLA6_PNPLA7_NTE1 39.1 65 0.0014 25.9 4.9 34 44-81 16-49 (175)
218 cd07210 Pat_hypo_W_succinogene 36.6 73 0.0016 27.2 5.0 34 44-81 16-49 (221)
219 TIGR00128 fabD malonyl CoA-acy 36.0 63 0.0014 28.0 4.6 23 60-82 83-105 (290)
220 PF10081 Abhydrolase_9: Alpha/ 35.7 76 0.0016 28.8 5.0 67 6-76 55-125 (289)
221 PLN02752 [acyl-carrier protein 34.2 49 0.0011 30.0 3.7 20 63-82 127-146 (343)
222 KOG4389|consensus 33.2 55 0.0012 32.1 3.9 62 9-72 163-230 (601)
223 KOG1283|consensus 32.9 86 0.0019 29.3 4.9 75 5-82 66-144 (414)
224 cd07230 Pat_TGL4-5_like Triacy 32.6 68 0.0015 30.4 4.5 36 42-81 87-122 (421)
225 COG3675 Predicted lipase [Lipi 32.5 19 0.00042 32.8 0.7 23 60-82 175-197 (332)
226 KOG2281|consensus 32.2 60 0.0013 33.0 4.1 79 3-82 667-749 (867)
227 PF03283 PAE: Pectinacetyleste 31.8 74 0.0016 29.6 4.5 55 44-102 141-199 (361)
228 KOG3043|consensus 31.0 42 0.00092 29.5 2.5 64 9-75 64-135 (242)
229 TIGR02816 pfaB_fam PfaB family 30.0 83 0.0018 30.9 4.7 24 56-81 263-286 (538)
230 PF07519 Tannase: Tannase and 29.9 73 0.0016 30.6 4.3 41 55-97 110-150 (474)
231 cd07209 Pat_hypo_Ecoli_Z1214_l 28.6 1.3E+02 0.0028 25.3 5.2 34 44-81 14-47 (215)
232 cd07207 Pat_ExoU_VipD_like Exo 27.8 1.3E+02 0.0027 24.4 4.9 34 44-81 15-48 (194)
233 cd07198 Patatin Patatin-like p 27.6 82 0.0018 25.3 3.6 35 44-82 14-48 (172)
234 cd07224 Pat_like Patatin-like 27.5 1.5E+02 0.0033 25.4 5.4 37 43-81 14-50 (233)
235 KOG2100|consensus 27.3 1.6E+02 0.0036 30.1 6.4 85 8-96 554-643 (755)
236 PRK07877 hypothetical protein; 26.1 62 0.0013 33.0 3.1 37 58-98 106-142 (722)
237 KOG3967|consensus 26.1 58 0.0013 28.8 2.5 41 56-96 186-226 (297)
238 KOG2551|consensus 23.5 43 0.00094 29.3 1.3 17 63-79 107-123 (230)
239 KOG1202|consensus 23.3 1.2E+02 0.0027 33.3 4.6 53 44-99 2169-2221(2376)
240 KOG2183|consensus 23.3 1.7E+02 0.0037 28.3 5.2 41 41-82 149-189 (492)
241 PRK12467 peptide synthase; Pro 22.8 1.8E+02 0.0039 35.4 6.5 82 12-102 3718-3800(3956)
242 cd07232 Pat_PLPL Patain-like p 22.5 1.2E+02 0.0026 28.7 4.1 43 42-90 81-123 (407)
243 cd01714 ETF_beta The electron 22.3 1.3E+02 0.0027 25.4 3.9 67 11-94 76-146 (202)
244 PF11144 DUF2920: Protein of u 22.1 1.7E+02 0.0036 27.9 4.9 23 60-82 184-206 (403)
245 cd07231 Pat_SDP1-like Sugar-De 22.0 1.5E+02 0.0032 27.4 4.5 33 45-81 85-117 (323)
246 cd07228 Pat_NTE_like_bacteria 21.6 1.9E+02 0.0042 23.2 4.8 34 44-81 16-49 (175)
247 COG0541 Ffh Signal recognition 21.3 98 0.0021 29.8 3.3 58 9-82 179-236 (451)
248 PF09994 DUF2235: Uncharacteri 21.3 1.6E+02 0.0035 26.0 4.5 41 39-81 73-113 (277)
249 PF15486 DUF4644: Domain of un 21.2 81 0.0017 25.7 2.3 61 133-197 10-79 (161)
250 KOG0780|consensus 20.8 1.3E+02 0.0028 28.9 3.8 59 8-82 179-237 (483)
251 cd01483 E1_enzyme_family Super 20.3 1.1E+02 0.0024 23.6 3.0 35 61-100 1-36 (143)
252 cd04479 RPA3 RPA3: A subfamily 20.2 1.2E+02 0.0026 22.7 3.0 24 70-96 7-30 (101)
253 cd07208 Pat_hypo_Ecoli_yjju_li 20.0 1.9E+02 0.0042 24.9 4.8 34 44-81 14-48 (266)
No 1
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=4.1e-70 Score=495.13 Aligned_cols=220 Identities=41% Similarity=0.669 Sum_probs=172.5
Q ss_pred cccccccc--CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhh
Q psy15133 3 RPIAYFHK--GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 3 ~~~a~l~~--~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
+++|||++ +++|||+|||+..+.. .|.+++.+++.||+.||+||++|.+ ..+++++++|||||||||||||++|++
T Consensus 93 ~~~all~~~~~d~NVI~VDWs~~a~~-~Y~~a~~n~~~vg~~la~~l~~L~~-~~g~~~~~ihlIGhSLGAHvaG~aG~~ 170 (331)
T PF00151_consen 93 MIKALLQKDTGDYNVIVVDWSRGASN-NYPQAVANTRLVGRQLAKFLSFLIN-NFGVPPENIHLIGHSLGAHVAGFAGKY 170 (331)
T ss_dssp HHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHH-HH---GGGEEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHhhccCCceEEEEcchhhccc-cccchhhhHHHHHHHHHHHHHHHHh-hcCCChhHEEEEeeccchhhhhhhhhh
Confidence 67899998 8999999999999887 5889999999999999999999972 358999999999999999999999999
Q ss_pred cccCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCC-----CCCCCcccCCCcceeecCCcCCCCCCCCC--
Q psy15133 81 VEKGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA-----GVLGQWGPSGHADYYVNGGTSQPGCGSFS-- 153 (229)
Q Consensus 81 ~~~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~-----~~~G~~~~~Gh~DfypNgG~~QPgC~~~~-- 153 (229)
++.+.||+||||||||+|+|+..++..||+++||+||||||||+ +.||+.+|+||+|||||||..||||....
T Consensus 171 ~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~~QPGC~~~~~~ 250 (331)
T PF00151_consen 171 LKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVIHTNAGTLPGGGLGTSEPIGHVDFYPNGGRRQPGCGNDSLE 250 (331)
T ss_dssp TTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE-SSES-HHH-SSBESS--SSEEEEETTTTS-TTSSS-CHT
T ss_pred ccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEEEcCCccccCCccccccccccceeecCCCccCCCCcccccc
Confidence 98224999999999999999998889999999999999999999 89999999999999999999999998754
Q ss_pred ccccccccccchHHHHHhhhcCCCCeEEeeCCChhhhhcCCCCCC-CCCccccCCccCCC------CCccceeecCCC
Q psy15133 154 IIEQLSCDHTKVTPYFIESINTKRGFWAAPCPNRFYYNLGWCDSP-ETQYVEMGERANPN------SLIPYPFEYGSK 224 (229)
Q Consensus 154 ~~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~~~C~~~-~~~~~~MG~~~~~~------~~g~y~~~~~~~ 224 (229)
+.....|||.||++||+|||.+++.|+|++|+||.+|+.+.|..+ ...+..||++++.. ++|.|||.|.++
T Consensus 251 ~~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~g~C~~c~~~~~~~mG~~~~~~~~~~~~~~G~yyl~T~~~ 328 (331)
T PF00151_consen 251 LTRFISCSHMRAVEYFAESINNPCNFPAVRCSSYDSFLAGKCDGCNNNRCAVMGYHADKFKGKTSPARGIYYLETNAK 328 (331)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHSTTTTB-EE-S-HHHHHTTTS-S--TT---BSSGGGGGSTTTTSSSSEEEEE---SS
T ss_pred ceecchhhhHHHHHHHHHHhcCCCCceeEeCcCHHHHhhcccccCCCCCCcCCCCCcccCCccccCCCeEEEEeeCCC
Confidence 123468999999999999999999999999999999999999874 23579999995533 699999999875
No 2
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=2.9e-64 Score=470.20 Aligned_cols=219 Identities=30% Similarity=0.460 Sum_probs=191.9
Q ss_pred cccccccc-CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 3 RPIAYFHK-GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 3 ~~~a~l~~-~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+.++++.+ +++|||+|||++++.+. |++++.+++.||+.+++||+.|.+ ..+++++++|||||||||||||++|++.
T Consensus 63 l~~al~~~~~d~nVI~VDw~g~g~s~-y~~a~~~t~~vg~~la~lI~~L~~-~~gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 63 LVAALYEREPSANVIVVDWLSRAQQH-YPTSAAYTKLVGKDVAKFVNWMQE-EFNYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred HHHHHHhccCCCEEEEEECCCcCCCC-CccccccHHHHHHHHHHHHHHHHH-hhCCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 45666654 48999999999999875 777788899999999999999962 3478899999999999999999999998
Q ss_pred ccCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCCC-----CCCCcccCCCcceeecCCcCCCCCCCCCc--
Q psy15133 82 EKGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAAG-----VLGQWGPSGHADYYVNGGTSQPGCGSFSI-- 154 (229)
Q Consensus 82 ~~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~~-----~~G~~~~~Gh~DfypNgG~~QPgC~~~~~-- 154 (229)
+ ++|+|||+||||+|+|+..++..|||++||+||||||||++ .+|+..|+||+|||||||..||||.....
T Consensus 141 p--~rV~rItgLDPAgP~F~~~~~~~rLd~~DA~fVdVIHTd~~~~~~~~lG~~~piGh~DFYPNGG~~QPGC~~~~~~~ 218 (442)
T TIGR03230 141 K--HKVNRITGLDPAGPTFEYADAPSTLSPDDADFVDVLHTNTRGSPDRSIGIQRPVGHIDIYPNGGTFQPGCDIQETLL 218 (442)
T ss_pred C--cceeEEEEEcCCCCcccccccccccCCCCCCeEEEEEecCCccccccccccccccceEeccCCCCCCCCCCcccccc
Confidence 7 89999999999999999988899999999999999999984 69999999999999999999999975321
Q ss_pred ----------cccccccccchHHHHHhhhcCC-CCeEEeeCCChhhhhcCCCCCCC-CCccccCCccCCC---CCcccee
Q psy15133 155 ----------IEQLSCDHTKVTPYFIESINTK-RGFWAAPCPNRFYYNLGWCDSPE-TQYVEMGERANPN---SLIPYPF 219 (229)
Q Consensus 155 ----------~~~~~CsH~ra~~~f~eSi~~~-~~f~a~~C~s~~~~~~~~C~~~~-~~~~~MG~~~~~~---~~g~y~~ 219 (229)
.....|||.||++||+|||.++ +.|+|++|+||.+|+.+.|.++. ..|+.|||++++. ++|.||+
T Consensus 219 ~~~~~~~~~~~~~~~CsH~Ra~~~f~eSi~~~~~~f~a~~C~s~~~f~~g~C~~c~~~~c~~mG~~~~~~~~~~~g~~yl 298 (442)
T TIGR03230 219 VIAEKGLGNMDQLVKCSHERSIHLFIDSLLNEENPSMAYRCSSKEAFNKGLCLSCRKNRCNKLGYEINKVRTKRSSKMYL 298 (442)
T ss_pred ccccccccccCcCccchhHHHHHHHHHHhcccCCCeeeEECCCHHHHhcCCCCCCCCCCCceeCccccccccCCceEEEE
Confidence 1236899999999999999654 79999999999999999998753 3589999999864 4789999
Q ss_pred ecCCCC
Q psy15133 220 EYGSKE 225 (229)
Q Consensus 220 ~~~~~~ 225 (229)
.|++..
T Consensus 299 ~T~~~~ 304 (442)
T TIGR03230 299 KTREMM 304 (442)
T ss_pred EeCCCC
Confidence 887653
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=8.8e-64 Score=442.88 Aligned_cols=217 Identities=39% Similarity=0.631 Sum_probs=195.7
Q ss_pred ccccccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 3 RPIAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 3 ~~~a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
++++||.++++|||+|||++++. ..|+.+..+++.+++.++++|+.|.+ ..+++++++|||||||||||||++|++++
T Consensus 57 l~~~ll~~~~~nVi~vD~~~~~~-~~y~~a~~~~~~v~~~la~~l~~L~~-~~g~~~~~i~lIGhSlGa~vAg~~a~~~~ 134 (275)
T cd00707 57 LRKAYLSRGDYNVIVVDWGRGAN-PNYPQAVNNTRVVGAELAKFLDFLVD-NTGLSLENVHLIGHSLGAHVAGFAGKRLN 134 (275)
T ss_pred HHHHHHhcCCCEEEEEECccccc-cChHHHHHhHHHHHHHHHHHHHHHHH-hcCCChHHEEEEEecHHHHHHHHHHHHhc
Confidence 56788888999999999998854 46888888999999999999999972 33678899999999999999999999997
Q ss_pred cCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCCCCCCCcccCCCcceeecCCcCCCCCCCCCc-ccccccc
Q psy15133 83 KGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAAGVLGQWGPSGHADYYVNGGTSQPGCGSFSI-IEQLSCD 161 (229)
Q Consensus 83 ~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~~~~G~~~~~Gh~DfypNgG~~QPgC~~~~~-~~~~~Cs 161 (229)
++|+||++||||+|+|....+..||+++||+||||||||++.+|+..|+||+|||||||..||||..... .....||
T Consensus 135 --~~v~~iv~LDPa~p~f~~~~~~~rl~~~dA~~V~vihT~~~~~G~~~~~gh~dfypngg~~QpgC~~~~~~~~~~~Cs 212 (275)
T cd00707 135 --GKLGRITGLDPAGPLFSGADPEDRLDPSDAQFVDVIHTDGGLLGFSQPIGHADFYPNGGRDQPGCPKDILSSDFVACS 212 (275)
T ss_pred --CccceeEEecCCcccccCCCcccccCCCCCCeEEEEEeCCCCCCccccccceEeccCCCCCCCCCCCccccccccccc
Confidence 7999999999999999988888999999999999999999999999999999999999999999986421 1246899
Q ss_pred ccchHHHHHhhhcCCCCeEEeeCCChhhhhcCCCCCCCCCccccCCccCCCCC-ccceeecCC
Q psy15133 162 HTKVTPYFIESINTKRGFWAAPCPNRFYYNLGWCDSPETQYVEMGERANPNSL-IPYPFEYGS 223 (229)
Q Consensus 162 H~ra~~~f~eSi~~~~~f~a~~C~s~~~~~~~~C~~~~~~~~~MG~~~~~~~~-g~y~~~~~~ 223 (229)
|.||++||+|||.++++|+|++|++|.+|+.+.|..+...+..||++++...+ |.||+.|.+
T Consensus 213 H~ra~~~~~esi~~~~~f~a~~C~~~~~~~~~~C~~~~~~~~~mG~~~~~~~~~G~~~~~T~~ 275 (275)
T cd00707 213 HQRAVHYFAESILSPCGFVAYPCSSYDEFLAGKCFPCGSGCVRMGYHADRFRREGKFYLKTNA 275 (275)
T ss_pred hHHHHHHHHHHccCCCCceeEeCCCHHHHhcCCCCCCCCCCcccCCccCCCCCCceEEEEcCC
Confidence 99999999999999999999999999999999998765357899999999987 999998863
No 4
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.33 E-value=6.4e-12 Score=101.31 Aligned_cols=110 Identities=31% Similarity=0.476 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc--cCCccccccccCCccccccCCCcccCcCCCCCC
Q psy15133 38 FAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE--KGRKLGRITGLDPTIIFYQTNNKTKDLDSTDAL 115 (229)
Q Consensus 38 ~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~--~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~ 115 (229)
.+...+...++.+. ...+..+++++||||||+||..++..+. ...++.++++++|+.+....... ..+.+.++.
T Consensus 9 ~~~~~i~~~~~~~~---~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~-~~~~~~~~~ 84 (153)
T cd00741 9 SLANLVLPLLKSAL---AQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE-DRLDPSDAL 84 (153)
T ss_pred HHHHHHHHHHHHHH---HHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH-HhhhccCCc
Confidence 34444444444432 1236789999999999999999999987 12478999999999998754321 357788999
Q ss_pred eEEEEEcCCCCCCCc------ccCCCcceeecCCcCCCCCCC
Q psy15133 116 FVDVIHTAAGVLGQW------GPSGHADYYVNGGTSQPGCGS 151 (229)
Q Consensus 116 fVdvIHT~~~~~G~~------~~~Gh~DfypNgG~~QPgC~~ 151 (229)
+|..||++.+.++.. ...+..+||.|++..++-|..
T Consensus 85 ~~~~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (153)
T cd00741 85 FVDRIVNDNDIVPRLPPGGEGYPHGGAEFYINGGKSQPGCCK 126 (153)
T ss_pred cEEEEEECCCccCCCCCCcCCCeecceEEEECCCCCCCcccc
Confidence 999999999877665 567899999999877776654
No 5
>PLN02965 Probable pheophorbidase
Probab=99.10 E-value=1.9e-10 Score=99.18 Aligned_cols=82 Identities=17% Similarity=0.156 Sum_probs=64.9
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPP-EKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~-~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
|...+|+||++|+++++.+..-.....+....++.+.++|+.| +. ++++||||||||.||..++...+ ++
T Consensus 26 L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~~lvGhSmGG~ia~~~a~~~p--~~ 96 (255)
T PLN02965 26 LDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-------PPDHKVILVGHSIGGGSVTEALCKFT--DK 96 (255)
T ss_pred HhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-------CCCCCEEEEecCcchHHHHHHHHhCc--hh
Confidence 4456799999999999987522122345666777777777766 33 59999999999999999999887 99
Q ss_pred cccccccCCccc
Q psy15133 87 LGRITGLDPTII 98 (229)
Q Consensus 87 v~rIt~LDPAgp 98 (229)
|.+++.++++.+
T Consensus 97 v~~lvl~~~~~~ 108 (255)
T PLN02965 97 ISMAIYVAAAMV 108 (255)
T ss_pred eeEEEEEccccC
Confidence 999999999754
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.09 E-value=2.8e-10 Score=100.58 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=65.6
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhh-cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQ-ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~-a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
+|.+.+|+||++|+++++.+..-.. ..++....++.+.++++.| +.++++||||||||.||..++...+ +
T Consensus 68 ~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p--~ 138 (302)
T PRK00870 68 ILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-------DLTDVTLVCQDWGGLIGLRLAAEHP--D 138 (302)
T ss_pred HHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-------CCCCEEEEEEChHHHHHHHHHHhCh--h
Confidence 3555689999999999998742111 2245566777777777766 4678999999999999999999877 8
Q ss_pred ccccccccCCcccc
Q psy15133 86 KLGRITGLDPTIIF 99 (229)
Q Consensus 86 ~v~rIt~LDPAgp~ 99 (229)
+|.+|+.++|+.|.
T Consensus 139 ~v~~lvl~~~~~~~ 152 (302)
T PRK00870 139 RFARLVVANTGLPT 152 (302)
T ss_pred heeEEEEeCCCCCC
Confidence 99999999986543
No 7
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.09 E-value=3.1e-10 Score=99.65 Aligned_cols=80 Identities=8% Similarity=-0.032 Sum_probs=66.3
Q ss_pred CCeEEEEEcCCCCCCCcchh------hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccC
Q psy15133 11 GDYNVIVVDYGSLVVVPCID------QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKG 84 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~------~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~ 84 (229)
.+++||++|+++++.+.... ...++....++.+.++|+.| ..+++|||||||||.||..++...|
T Consensus 54 ~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p-- 124 (294)
T PLN02824 54 KSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAP-- 124 (294)
T ss_pred hCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhCh--
Confidence 45899999999999876321 12456788888888888877 3589999999999999999999887
Q ss_pred CccccccccCCcccc
Q psy15133 85 RKLGRITGLDPTIIF 99 (229)
Q Consensus 85 ~~v~rIt~LDPAgp~ 99 (229)
++|.+|+.++|+.+.
T Consensus 125 ~~v~~lili~~~~~~ 139 (294)
T PLN02824 125 ELVRGVMLINISLRG 139 (294)
T ss_pred hheeEEEEECCCccc
Confidence 999999999997543
No 8
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.04 E-value=1e-09 Score=89.01 Aligned_cols=80 Identities=23% Similarity=0.135 Sum_probs=65.5
Q ss_pred cCCeEEEEEcCCCCCCCcchhh-cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQ-ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLG 88 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~-a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~ 88 (229)
.++++||++|+++.+.+..... ........++.+.++++.+ ..++++|||||+||.++..++...+ ++|.
T Consensus 22 ~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~ 92 (228)
T PF12697_consen 22 ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-------GIKKVILVGHSMGGMIALRLAARYP--DRVK 92 (228)
T ss_dssp HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-------TTSSEEEEEETHHHHHHHHHHHHSG--GGEE
T ss_pred hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-------ccccccccccccccccccccccccc--cccc
Confidence 3799999999999998764322 2345666777777777776 3389999999999999999999887 8999
Q ss_pred cccccCCccc
Q psy15133 89 RITGLDPTII 98 (229)
Q Consensus 89 rIt~LDPAgp 98 (229)
+++.++|...
T Consensus 93 ~~vl~~~~~~ 102 (228)
T PF12697_consen 93 GLVLLSPPPP 102 (228)
T ss_dssp EEEEESESSS
T ss_pred cceeeccccc
Confidence 9999999874
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.00 E-value=1.1e-09 Score=95.43 Aligned_cols=78 Identities=15% Similarity=0.089 Sum_probs=64.6
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++++||++|.++++.+.. +....+....++.+.++++.| ..++++||||||||.||..++...+ ++|.+|
T Consensus 50 ~~~~vi~~Dl~G~G~S~~-~~~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p--~~v~~l 119 (276)
T TIGR02240 50 PDLEVIAFDVPGVGGSST-PRHPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYP--ERCKKL 119 (276)
T ss_pred cCceEEEECCCCCCCCCC-CCCcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCH--HHhhhe
Confidence 469999999999998752 223345677778888888776 4678999999999999999999987 899999
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.++|+..
T Consensus 120 vl~~~~~~ 127 (276)
T TIGR02240 120 ILAATAAG 127 (276)
T ss_pred EEeccCCc
Confidence 99999753
No 10
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.00 E-value=1.8e-09 Score=89.21 Aligned_cols=75 Identities=20% Similarity=0.243 Sum_probs=63.3
Q ss_pred eEEEEEcCCCCCCCcc---hhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccc
Q psy15133 13 YNVIVVDYGSLVVVPC---IDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~---y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~r 89 (229)
|+||++||++.+.+.. ..........+.+.+..+++.| +.+++++|||||||.++..++...| ++|++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~vG~S~Gg~~~~~~a~~~p--~~v~~ 71 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-------GIKKINLVGHSMGGMLALEYAAQYP--ERVKK 71 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-------TTSSEEEEEETHHHHHHHHHHHHSG--GGEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-------CCCCeEEEEECCChHHHHHHHHHCc--hhhcC
Confidence 6899999999998763 3345566777788888777766 5677999999999999999999988 89999
Q ss_pred ccccCCc
Q psy15133 90 ITGLDPT 96 (229)
Q Consensus 90 It~LDPA 96 (229)
|+.+.|+
T Consensus 72 lvl~~~~ 78 (230)
T PF00561_consen 72 LVLISPP 78 (230)
T ss_dssp EEEESES
T ss_pred cEEEeee
Confidence 9999886
No 11
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.98 E-value=1.7e-09 Score=91.39 Aligned_cols=76 Identities=17% Similarity=0.032 Sum_probs=59.6
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
+|+||++||++++.+.... ..+....++.+.++++.+ ..++++||||||||.||..++.+.+ +.+|.+|+
T Consensus 27 ~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~-------~~~~~~lvG~S~Gg~va~~~a~~~~-~~~v~~lv 96 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSY-------NILPYWLVGYSLGGRIAMYYACQGL-AGGLCGLI 96 (242)
T ss_pred CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHc-------CCCCeEEEEECHHHHHHHHHHHhCC-cccccEEE
Confidence 6999999999999875322 235666666776666654 5789999999999999999998875 24599999
Q ss_pred ccCCcc
Q psy15133 92 GLDPTI 97 (229)
Q Consensus 92 ~LDPAg 97 (229)
.++|..
T Consensus 97 l~~~~~ 102 (242)
T PRK11126 97 VEGGNP 102 (242)
T ss_pred EeCCCC
Confidence 887764
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.96 E-value=1.3e-09 Score=94.24 Aligned_cols=81 Identities=22% Similarity=0.191 Sum_probs=59.9
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
+...+|+||++|+++++.+.............++.+.++++.| +.++++||||||||.||..++.+.+ ++|
T Consensus 56 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v 126 (282)
T TIGR03343 56 FVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-------DIEKAHLVGNSMGGATALNFALEYP--DRI 126 (282)
T ss_pred HHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-------CCCCeeEEEECchHHHHHHHHHhCh--Hhh
Confidence 3345799999999999987532111111112345555665554 6789999999999999999998877 899
Q ss_pred ccccccCCcc
Q psy15133 88 GRITGLDPTI 97 (229)
Q Consensus 88 ~rIt~LDPAg 97 (229)
.+++.++|++
T Consensus 127 ~~lvl~~~~~ 136 (282)
T TIGR03343 127 GKLILMGPGG 136 (282)
T ss_pred ceEEEECCCC
Confidence 9999999874
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.94 E-value=2.8e-09 Score=93.62 Aligned_cols=75 Identities=11% Similarity=0.008 Sum_probs=62.6
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
+++||++|+++++.++ .+...+.....++++..+++.| ..+++|||||||||.||..++.+.| ++|.+|+
T Consensus 53 ~~~via~D~~G~G~S~-~~~~~~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~li 122 (295)
T PRK03592 53 LGRCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHP--DRVRGIA 122 (295)
T ss_pred CCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhCh--hheeEEE
Confidence 4699999999999875 2223356677788888888877 4589999999999999999999987 9999999
Q ss_pred ccCCc
Q psy15133 92 GLDPT 96 (229)
Q Consensus 92 ~LDPA 96 (229)
.++|.
T Consensus 123 l~~~~ 127 (295)
T PRK03592 123 FMEAI 127 (295)
T ss_pred EECCC
Confidence 99983
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.93 E-value=3.5e-09 Score=90.01 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=61.0
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++++||++|+++++.+.. . ........++++.++++.| ..++++||||||||.+|..++...+ ++|.++
T Consensus 41 ~~~~vi~~D~~G~G~s~~-~-~~~~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~--~~v~~l 109 (255)
T PRK10673 41 NDHDIIQVDMRNHGLSPR-D-PVMNYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAP--DRIDKL 109 (255)
T ss_pred hCCeEEEECCCCCCCCCC-C-CCCCHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCH--hhcceE
Confidence 569999999999987752 2 2345566677777777665 5678999999999999999998877 899999
Q ss_pred cccCCcc
Q psy15133 91 TGLDPTI 97 (229)
Q Consensus 91 t~LDPAg 97 (229)
+.+|++.
T Consensus 110 vli~~~~ 116 (255)
T PRK10673 110 VAIDIAP 116 (255)
T ss_pred EEEecCC
Confidence 9999754
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.92 E-value=3.5e-09 Score=94.77 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=67.6
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+|+|+++|+++++.+..............+++..+++.|.. .......+++|+||||||.||..++...+ ++
T Consensus 82 ~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~p--~~ 158 (330)
T PLN02298 82 FLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLANP--EG 158 (330)
T ss_pred HHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcCc--cc
Confidence 3556789999999999998753222233566778889999998862 22233457999999999999999988876 88
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|.+|+.+.|..
T Consensus 159 v~~lvl~~~~~ 169 (330)
T PLN02298 159 FDGAVLVAPMC 169 (330)
T ss_pred ceeEEEecccc
Confidence 99999998864
No 16
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.91 E-value=4.2e-09 Score=96.29 Aligned_cols=79 Identities=14% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHh-hcccCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTAN-YVEKGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~-~~~~~~~v~r 89 (229)
++|+||++|+++++.+.......++....++.+.++++.| ..++++||||||||.||..++. ..+ ++|.+
T Consensus 113 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~~P--~rV~~ 183 (360)
T PLN02679 113 KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASESTR--DLVRG 183 (360)
T ss_pred cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhcCh--hhcCE
Confidence 4799999999999987532122345667777777777766 4579999999999999988775 445 89999
Q ss_pred ccccCCccc
Q psy15133 90 ITGLDPTII 98 (229)
Q Consensus 90 It~LDPAgp 98 (229)
|+.++|++.
T Consensus 184 LVLi~~~~~ 192 (360)
T PLN02679 184 LVLLNCAGG 192 (360)
T ss_pred EEEECCccc
Confidence 999999864
No 17
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.90 E-value=3.6e-09 Score=95.72 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=61.3
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCc-eEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEK-LHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~-ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
|..++|+||++|+++++.+.. ........++.+.++++.| ++++ ++||||||||.||..++.+.+ ++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ll~~l-------~l~~~~~lvG~SmGG~vA~~~A~~~P--~~ 162 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSLD---VPIDTADQADAIALLLDAL-------GIARLHAFVGYSYGALVGLQFASRHP--AR 162 (343)
T ss_pred cCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHHHc-------CCCcceEEEEECHHHHHHHHHHHHCh--Hh
Confidence 334579999999999876531 2234556677777777766 4656 479999999999999999987 99
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|.+|+.++|+.
T Consensus 163 V~~LvLi~s~~ 173 (343)
T PRK08775 163 VRTLVVVSGAH 173 (343)
T ss_pred hheEEEECccc
Confidence 99999999874
No 18
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.90 E-value=5.1e-09 Score=88.65 Aligned_cols=82 Identities=18% Similarity=0.092 Sum_probs=62.4
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhc--ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQI--SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKG 84 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a--~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~ 84 (229)
+|...+++||++|+++++.+..-... ..++..+++.+..+++.+ ..++++||||||||.||..++...+
T Consensus 48 ~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~liG~S~Gg~ia~~~a~~~p-- 118 (288)
T TIGR01250 48 LLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-------GLDKFYLLGHSWGGMLAQEYALKYG-- 118 (288)
T ss_pred HHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-------CCCcEEEEEeehHHHHHHHHHHhCc--
Confidence 34445799999999999876521111 245666777776666655 4567999999999999999998877
Q ss_pred CccccccccCCcc
Q psy15133 85 RKLGRITGLDPTI 97 (229)
Q Consensus 85 ~~v~rIt~LDPAg 97 (229)
++|.+++.++|+.
T Consensus 119 ~~v~~lvl~~~~~ 131 (288)
T TIGR01250 119 QHLKGLIISSMLD 131 (288)
T ss_pred cccceeeEecccc
Confidence 8999999988764
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.88 E-value=6.3e-09 Score=87.03 Aligned_cols=79 Identities=18% Similarity=0.128 Sum_probs=61.9
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
.+++||++|.++++.+..-.....+....++.+.++++.+ ..++++||||||||.+|..++...+ ++|.+|
T Consensus 38 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~--~~v~~~ 108 (257)
T TIGR03611 38 QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYP--ERLLSL 108 (257)
T ss_pred hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHCh--HHhHHh
Confidence 4699999999999876432222345666677777777665 4678999999999999999998876 789999
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.+++...
T Consensus 109 i~~~~~~~ 116 (257)
T TIGR03611 109 VLINAWSR 116 (257)
T ss_pred eeecCCCC
Confidence 99987543
No 20
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.88 E-value=5.1e-09 Score=92.49 Aligned_cols=78 Identities=10% Similarity=0.071 Sum_probs=60.6
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++|+||++||++++.+..-..........++.+.++++.+ +.++++|+||||||.||..++...+ ++|.+|
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvG~S~Gg~va~~~a~~~p--~~v~~l 129 (286)
T PRK03204 59 DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-------GLDRYLSMGQDWGGPISMAVAVERA--DRVRGV 129 (286)
T ss_pred CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-------CCCCEEEEEECccHHHHHHHHHhCh--hheeEE
Confidence 4599999999999977522111234566677777777665 5678999999999999999998877 899999
Q ss_pred cccCCcc
Q psy15133 91 TGLDPTI 97 (229)
Q Consensus 91 t~LDPAg 97 (229)
+.++|..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9988753
No 21
>PLN02578 hydrolase
Probab=98.86 E-value=7.3e-09 Score=94.31 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=64.3
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++++|+++|+++++.+.. +...+.....++++.++++.+ ..++++||||||||.||..++.+.+ ++|.++
T Consensus 111 ~~~~v~~~D~~G~G~S~~-~~~~~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p--~~v~~l 180 (354)
T PLN02578 111 KKYKVYALDLLGFGWSDK-ALIEYDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYP--ELVAGV 180 (354)
T ss_pred cCCEEEEECCCCCCCCCC-cccccCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhCh--HhcceE
Confidence 469999999999987752 223345566677788777776 2478999999999999999999987 999999
Q ss_pred cccCCcccc
Q psy15133 91 TGLDPTIIF 99 (229)
Q Consensus 91 t~LDPAgp~ 99 (229)
+.++|++++
T Consensus 181 vLv~~~~~~ 189 (354)
T PLN02578 181 ALLNSAGQF 189 (354)
T ss_pred EEECCCccc
Confidence 999998753
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.86 E-value=7.4e-09 Score=85.51 Aligned_cols=78 Identities=17% Similarity=0.073 Sum_probs=61.7
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
.+++|+++|+++.+.+.. .....+....++.+.++++.+ +.++++||||||||.+|-.++...+ ++|.++
T Consensus 38 ~~~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p--~~v~~l 107 (251)
T TIGR02427 38 PDFRVLRYDKRGHGLSDA-PEGPYSIEDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRP--DRVRAL 107 (251)
T ss_pred cccEEEEecCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCH--HHhHHH
Confidence 579999999999987742 222345666777777777665 4578999999999999999888876 899999
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.++|+..
T Consensus 108 i~~~~~~~ 115 (251)
T TIGR02427 108 VLSNTAAK 115 (251)
T ss_pred hhccCccc
Confidence 99998754
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.85 E-value=6.3e-09 Score=91.68 Aligned_cols=84 Identities=15% Similarity=0.121 Sum_probs=62.0
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+|+||++|+++++.+..-+....+....++.+.++|+.|. ..++++||||||||.|+..++..++ ++
T Consensus 40 ~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~------~~~~v~lvGhS~GG~v~~~~a~~~p--~~ 111 (273)
T PLN02211 40 LMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP------ENEKVILVGHSAGGLSVTQAIHRFP--KK 111 (273)
T ss_pred HHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC------CCCCEEEEEECchHHHHHHHHHhCh--hh
Confidence 455668999999999998653211122445555666666666542 2479999999999999999998876 89
Q ss_pred cccccccCCccc
Q psy15133 87 LGRITGLDPTII 98 (229)
Q Consensus 87 v~rIt~LDPAgp 98 (229)
|.+++.+++..+
T Consensus 112 v~~lv~~~~~~~ 123 (273)
T PLN02211 112 ICLAVYVAATML 123 (273)
T ss_pred eeEEEEeccccC
Confidence 999999987543
No 24
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.85 E-value=8.4e-09 Score=93.44 Aligned_cols=88 Identities=13% Similarity=0.008 Sum_probs=65.5
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
|...+|+||++|+++++.+..-.....+...+.+.+.++++.|.. .......+++|+||||||.||..++...+ ++|
T Consensus 111 l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~-~~~~~~~~~~LvGhSmGG~val~~a~~~p--~~v 187 (349)
T PLN02385 111 IASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKG-NPEFRGLPSFLFGQSMGGAVALKVHLKQP--NAW 187 (349)
T ss_pred HHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHh-ccccCCCCEEEEEeccchHHHHHHHHhCc--chh
Confidence 445689999999999998752111112455667777777777741 12344568999999999999999998876 899
Q ss_pred ccccccCCccc
Q psy15133 88 GRITGLDPTII 98 (229)
Q Consensus 88 ~rIt~LDPAgp 98 (229)
.++++++|+..
T Consensus 188 ~glVLi~p~~~ 198 (349)
T PLN02385 188 DGAILVAPMCK 198 (349)
T ss_pred hheeEeccccc
Confidence 99999998754
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.80 E-value=8.7e-09 Score=88.40 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=53.8
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++|+||++|+++++.+..+. ..+.. ++++.+. .+..+++|||||||||.||-.++...+ ++|.+|
T Consensus 38 ~~~~vi~~Dl~G~G~S~~~~--~~~~~-------~~~~~l~----~~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~l 102 (256)
T PRK10349 38 SHFTLHLVDLPGFGRSRGFG--ALSLA-------DMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHP--ERVQAL 102 (256)
T ss_pred cCCEEEEecCCCCCCCCCCC--CCCHH-------HHHHHHH----hcCCCCeEEEEECHHHHHHHHHHHhCh--HhhheE
Confidence 45999999999999875332 22322 2222332 124589999999999999999998876 999999
Q ss_pred cccCCcc
Q psy15133 91 TGLDPTI 97 (229)
Q Consensus 91 t~LDPAg 97 (229)
+.++|+.
T Consensus 103 ili~~~~ 109 (256)
T PRK10349 103 VTVASSP 109 (256)
T ss_pred EEecCcc
Confidence 9999953
No 26
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.79 E-value=1.6e-08 Score=86.47 Aligned_cols=78 Identities=14% Similarity=0.077 Sum_probs=60.3
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
+++||++|+++++.+..-.....+....++.+.++++.+ ..++++||||||||.+|..++...+ .++.+|+
T Consensus 54 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~v 124 (278)
T TIGR03056 54 SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-------GLSPDGVIGHSAGAAIALRLALDGP--VTPRMVV 124 (278)
T ss_pred CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-------CCCCceEEEECccHHHHHHHHHhCC--cccceEE
Confidence 599999999999876421111345666677777766654 4578999999999999999998876 8899999
Q ss_pred ccCCccc
Q psy15133 92 GLDPTII 98 (229)
Q Consensus 92 ~LDPAgp 98 (229)
.+++...
T Consensus 125 ~~~~~~~ 131 (278)
T TIGR03056 125 GINAALM 131 (278)
T ss_pred EEcCccc
Confidence 9998643
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=98.79 E-value=2e-08 Score=90.45 Aligned_cols=85 Identities=15% Similarity=0.001 Sum_probs=65.1
Q ss_pred cccCCeEEEEEcCCCCCCCcchhh-----cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQ-----ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~-----a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
|...+++|+++||++++.+..... ...+.....+.+..+++.+. ...+..+++|+||||||.||..++...+
T Consensus 77 l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~l~GhSmGG~ia~~~a~~~p 153 (330)
T PRK10749 77 LFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEI---QPGPYRKRYALAHSMGGAILTLFLQRHP 153 (330)
T ss_pred HHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHH---hcCCCCCeEEEEEcHHHHHHHHHHHhCC
Confidence 456789999999999998752211 11245667778888887764 1345689999999999999998887766
Q ss_pred cCCccccccccCCcc
Q psy15133 83 KGRKLGRITGLDPTI 97 (229)
Q Consensus 83 ~~~~v~rIt~LDPAg 97 (229)
++|.+++.+.|+.
T Consensus 154 --~~v~~lvl~~p~~ 166 (330)
T PRK10749 154 --GVFDAIALCAPMF 166 (330)
T ss_pred --CCcceEEEECchh
Confidence 8999999999874
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.79 E-value=1.9e-08 Score=82.66 Aligned_cols=78 Identities=17% Similarity=0.136 Sum_probs=55.9
Q ss_pred CCeEEEEEcCCCCCCCcchhh-cccChHHHHHH-HHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQ-ISWSPSFAGAC-IAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLG 88 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~-a~~~~~~vg~~-la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~ 88 (229)
.+++|+++||++.+.+..... .........+. +..+++ .++.++++|+||||||.+|-.++...+ ++|.
T Consensus 26 ~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~G~S~Gg~ia~~~a~~~~--~~v~ 96 (251)
T TIGR03695 26 PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLD-------QLGIEPFFLVGYSMGGRIALYYALQYP--ERVQ 96 (251)
T ss_pred ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHH-------HcCCCeEEEEEeccHHHHHHHHHHhCc--hhee
Confidence 689999999999987643211 11223333333 333333 235689999999999999999999887 8899
Q ss_pred cccccCCcc
Q psy15133 89 RITGLDPTI 97 (229)
Q Consensus 89 rIt~LDPAg 97 (229)
+++.++|..
T Consensus 97 ~lil~~~~~ 105 (251)
T TIGR03695 97 GLILESGSP 105 (251)
T ss_pred eeEEecCCC
Confidence 999998864
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.76 E-value=2.3e-08 Score=95.51 Aligned_cols=78 Identities=18% Similarity=0.143 Sum_probs=59.3
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHH-HHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIA-QLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLG 88 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la-~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~ 88 (229)
+.+|+||++||++++.++.-....+..+...+.+. .+++.+ +.++++||||||||.||..++...| ++|.
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-------g~~k~~LVGhSmGG~iAl~~A~~~P--e~V~ 300 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-------KVKSFHIVAHSLGCILALALAVKHP--GAVK 300 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-------CCCCEEEEEECHHHHHHHHHHHhCh--Hhcc
Confidence 36899999999999987532122234455555553 444443 5789999999999999999999887 8999
Q ss_pred cccccCCc
Q psy15133 89 RITGLDPT 96 (229)
Q Consensus 89 rIt~LDPA 96 (229)
+|+.++|+
T Consensus 301 ~LVLi~~~ 308 (481)
T PLN03087 301 SLTLLAPP 308 (481)
T ss_pred EEEEECCC
Confidence 99999984
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=98.76 E-value=2.4e-08 Score=86.53 Aligned_cols=85 Identities=16% Similarity=0.008 Sum_probs=59.8
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+++||++|+++++.+..............+++.+.+..+. .....++++||||||||.||..++...+ ++
T Consensus 47 ~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~---~~~~~~~~~lvG~S~GG~ia~~~a~~~p--~~ 121 (276)
T PHA02857 47 NISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIK---STYPGVPVFLLGHSMGATISILAAYKNP--NL 121 (276)
T ss_pred HHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHH---hhCCCCCEEEEEcCchHHHHHHHHHhCc--cc
Confidence 355668999999999999875322112222223344444455443 1234568999999999999999998876 78
Q ss_pred cccccccCCc
Q psy15133 87 LGRITGLDPT 96 (229)
Q Consensus 87 v~rIt~LDPA 96 (229)
|.+|+.+.|.
T Consensus 122 i~~lil~~p~ 131 (276)
T PHA02857 122 FTAMILMSPL 131 (276)
T ss_pred cceEEEeccc
Confidence 9999999985
No 31
>PRK06489 hypothetical protein; Provisional
Probab=98.76 E-value=2.5e-08 Score=90.87 Aligned_cols=79 Identities=13% Similarity=0.008 Sum_probs=57.2
Q ss_pred cCCeEEEEEcCCCCCCCcchhh------cccChHHHHHHHHHHH-HHHhcCCCCCCCCceE-EEEecHHHHHHHHHHhhc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQ------ISWSPSFAGACIAQLA-YYLSQHPRGVPPEKLH-LLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~------a~~~~~~vg~~la~~i-~~L~~~~~~~~~~~ih-lIGhSLGAhIAg~~g~~~ 81 (229)
..+|+||++|+++++.+..-.. ..++....++.+..++ +. +++++++ ||||||||.||..++.+.
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~-------lgi~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEG-------LGVKHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHh-------cCCCceeEEEEECHHHHHHHHHHHhC
Confidence 4679999999999997742111 0234444444443322 33 3667886 899999999999999998
Q ss_pred ccCCccccccccCCcc
Q psy15133 82 EKGRKLGRITGLDPTI 97 (229)
Q Consensus 82 ~~~~~v~rIt~LDPAg 97 (229)
| ++|.+++.++++.
T Consensus 176 P--~~V~~LVLi~s~~ 189 (360)
T PRK06489 176 P--DFMDALMPMASQP 189 (360)
T ss_pred c--hhhheeeeeccCc
Confidence 7 9999999998863
No 32
>PRK07581 hypothetical protein; Validated
Probab=98.75 E-value=2e-08 Score=90.32 Aligned_cols=86 Identities=14% Similarity=0.118 Sum_probs=60.0
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhc--ccCh-----HHHHHHHHHHHHHHhcCCCCCCCCc-eEEEEecHHHHHHHHHHh
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQI--SWSP-----SFAGACIAQLAYYLSQHPRGVPPEK-LHLLGWSIGAHIAGLTAN 79 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a--~~~~-----~~vg~~la~~i~~L~~~~~~~~~~~-ihlIGhSLGAhIAg~~g~ 79 (229)
|...+|+||++|+++++.+..-... .+.. ..++++++.+...|. ..+++++ +|||||||||.||..++.
T Consensus 67 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~lgi~~~~~lvG~S~GG~va~~~a~ 143 (339)
T PRK07581 67 LDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT---EKFGIERLALVVGWSMGAQQTYHWAV 143 (339)
T ss_pred cCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH---HHhCCCceEEEEEeCHHHHHHHHHHH
Confidence 4456899999999999977421110 1111 124555555333332 1346789 589999999999999999
Q ss_pred hcccCCccccccccCCccc
Q psy15133 80 YVEKGRKLGRITGLDPTII 98 (229)
Q Consensus 80 ~~~~~~~v~rIt~LDPAgp 98 (229)
+.| ++|.+|+.++.+..
T Consensus 144 ~~P--~~V~~Lvli~~~~~ 160 (339)
T PRK07581 144 RYP--DMVERAAPIAGTAK 160 (339)
T ss_pred HCH--HHHhhheeeecCCC
Confidence 988 99999999987643
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.72 E-value=2.9e-08 Score=92.43 Aligned_cols=84 Identities=17% Similarity=0.080 Sum_probs=57.6
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHH-HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACI-AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~l-a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~r 89 (229)
.+|+|+++||++++.+..............+.+ ..+.+.+. .+++++++|+||||||.||..++...+ ++|.+
T Consensus 130 ~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~----~l~~~~~~lvGhS~GG~la~~~a~~~p--~~v~~ 203 (402)
T PLN02894 130 SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK----AKNLSNFILLGHSFGGYVAAKYALKHP--EHVQH 203 (402)
T ss_pred hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH----HcCCCCeEEEEECHHHHHHHHHHHhCc--hhhcE
Confidence 359999999999987752211111222222222 22223332 336679999999999999999998877 89999
Q ss_pred ccccCCccccc
Q psy15133 90 ITGLDPTIIFY 100 (229)
Q Consensus 90 It~LDPAgp~f 100 (229)
++.++|++...
T Consensus 204 lvl~~p~~~~~ 214 (402)
T PLN02894 204 LILVGPAGFSS 214 (402)
T ss_pred EEEECCccccC
Confidence 99999987543
No 34
>KOG4409|consensus
Probab=98.69 E-value=1.4e-08 Score=92.46 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=62.5
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
..||.++||.+.+.++. +.-..+... ..-+|++.+.+-...++++++.|+||||||.+|..+|..+| ++|+.|+
T Consensus 116 ~~~vyaiDllG~G~SSR-P~F~~d~~~---~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyP--erV~kLi 189 (365)
T KOG4409|consen 116 IRNVYAIDLLGFGRSSR-PKFSIDPTT---AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYP--ERVEKLI 189 (365)
T ss_pred cCceEEecccCCCCCCC-CCCCCCccc---chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhCh--HhhceEE
Confidence 78999999999998752 111111111 11256666653345789999999999999999999999988 9999999
Q ss_pred ccCCccccc
Q psy15133 92 GLDPTIIFY 100 (229)
Q Consensus 92 ~LDPAgp~f 100 (229)
+.||+|.--
T Consensus 190 LvsP~Gf~~ 198 (365)
T KOG4409|consen 190 LVSPWGFPE 198 (365)
T ss_pred Eeccccccc
Confidence 999998543
No 35
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.68 E-value=6.9e-08 Score=85.66 Aligned_cols=85 Identities=19% Similarity=0.111 Sum_probs=65.1
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
.|...+|+|+++|+++++.+..... ........+++...++.|. . .+.++++|+||||||.||..++...+ ++
T Consensus 51 ~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~--~--~~~~~v~LvG~SmGG~vAl~~A~~~p--~~ 123 (266)
T TIGR03101 51 AFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLI--E--QGHPPVTLWGLRLGALLALDAANPLA--AK 123 (266)
T ss_pred HHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHH--h--cCCCCEEEEEECHHHHHHHHHHHhCc--cc
Confidence 3456789999999999987642211 2244455677777788885 1 24679999999999999999888876 88
Q ss_pred cccccccCCccc
Q psy15133 87 LGRITGLDPTII 98 (229)
Q Consensus 87 v~rIt~LDPAgp 98 (229)
+.+++.++|+..
T Consensus 124 v~~lVL~~P~~~ 135 (266)
T TIGR03101 124 CNRLVLWQPVVS 135 (266)
T ss_pred cceEEEeccccc
Confidence 999999999743
No 36
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.68 E-value=5.7e-08 Score=90.26 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=64.2
Q ss_pred CCeEEEEEcCCCCCCCcchhh---cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQ---ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~---a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
++++||++||++++.+..-.. ..++....++.+.++++.| ..++++|||||+||.||..++...+ ++|
T Consensus 152 ~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P--~~v 222 (383)
T PLN03084 152 KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHP--DKI 222 (383)
T ss_pred cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhCh--Hhh
Confidence 579999999999998752211 1345667788888888777 4578999999999999999999887 999
Q ss_pred ccccccCCccc
Q psy15133 88 GRITGLDPTII 98 (229)
Q Consensus 88 ~rIt~LDPAgp 98 (229)
.+++.++|+.+
T Consensus 223 ~~lILi~~~~~ 233 (383)
T PLN03084 223 KKLILLNPPLT 233 (383)
T ss_pred cEEEEECCCCc
Confidence 99999999754
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.66 E-value=7.8e-08 Score=87.28 Aligned_cols=82 Identities=15% Similarity=-0.057 Sum_probs=62.1
Q ss_pred ccccCCeEEEEEcCCC--CCCCcc---------hh--hcccChHHHHHHHHHHHHHHhcCCCCCCCCc-eEEEEecHHHH
Q psy15133 7 YFHKGDYNVIVVDYGS--LVVVPC---------ID--QISWSPSFAGACIAQLAYYLSQHPRGVPPEK-LHLLGWSIGAH 72 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~--~a~~~~---------y~--~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~-ihlIGhSLGAh 72 (229)
.|..++|+||++|.++ ++.+.. |. ...+.+...++.+.++++.| ++++ ++||||||||.
T Consensus 67 ~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~l~G~S~Gg~ 139 (351)
T TIGR01392 67 AIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL-------GIEQIAAVVGGSMGGM 139 (351)
T ss_pred CcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc-------CCCCceEEEEECHHHH
Confidence 3446789999999998 544321 10 01245667777777777665 5678 99999999999
Q ss_pred HHHHHHhhcccCCccccccccCCcc
Q psy15133 73 IAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 73 IAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
||..++...+ ++|.+++.++++.
T Consensus 140 ia~~~a~~~p--~~v~~lvl~~~~~ 162 (351)
T TIGR01392 140 QALEWAIDYP--ERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHCh--HhhheEEEEccCC
Confidence 9999998887 9999999999864
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.64 E-value=1e-07 Score=84.79 Aligned_cols=81 Identities=15% Similarity=-0.002 Sum_probs=60.3
Q ss_pred cccCCeEEEEEcCCCCCCCcchh-hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCID-QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~-~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+...+++||++|+++++.+..-. ....+...+.+.+..+++.| +++++++|||||||.|+..++...+ ++
T Consensus 49 ~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-------~~~~~~lvG~S~GG~ia~~~a~~~p--~~ 119 (306)
T TIGR01249 49 FDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-------GIKNWLVFGGSWGSTLALAYAQTHP--EV 119 (306)
T ss_pred cCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-------CCCCEEEEEECHHHHHHHHHHHHCh--Hh
Confidence 34467999999999998775211 01223445566666665554 5678999999999999999998887 89
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|.+++.++++.
T Consensus 120 v~~lvl~~~~~ 130 (306)
T TIGR01249 120 VTGLVLRGIFL 130 (306)
T ss_pred hhhheeecccc
Confidence 99999998754
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.58 E-value=1.5e-07 Score=84.79 Aligned_cols=76 Identities=21% Similarity=0.147 Sum_probs=59.1
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
.|+|+++|+++++.+.. .....+...+++.+.++++.+ ++++++||||||||.+|..++...+ .+|.+++
T Consensus 157 ~~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~~--~~v~~lv 226 (371)
T PRK14875 157 GRPVIALDLPGHGASSK-AVGAGSLDELAAAVLAFLDAL-------GIERAHLVGHSMGGAVALRLAARAP--QRVASLT 226 (371)
T ss_pred CCEEEEEcCCCCCCCCC-CCCCCCHHHHHHHHHHHHHhc-------CCccEEEEeechHHHHHHHHHHhCc--hheeEEE
Confidence 49999999999987632 122345566666666666544 5678999999999999999888866 8999999
Q ss_pred ccCCcc
Q psy15133 92 GLDPTI 97 (229)
Q Consensus 92 ~LDPAg 97 (229)
.++|.+
T Consensus 227 ~~~~~~ 232 (371)
T PRK14875 227 LIAPAG 232 (371)
T ss_pred EECcCC
Confidence 999874
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.58 E-value=1e-07 Score=78.51 Aligned_cols=73 Identities=16% Similarity=0.158 Sum_probs=52.5
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++++||++|+++++.+... ...+...+. +.+..+ ..++++||||||||.+|..++.+.+ ++|.+|
T Consensus 29 ~~~~vi~~d~~G~G~s~~~--~~~~~~~~~----~~~~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~ 93 (245)
T TIGR01738 29 AHFTLHLVDLPGHGRSRGF--GPLSLADAA----EAIAAQ-------APDPAIWLGWSLGGLVALHIAATHP--DRVRAL 93 (245)
T ss_pred cCeEEEEecCCcCccCCCC--CCcCHHHHH----HHHHHh-------CCCCeEEEEEcHHHHHHHHHHHHCH--Hhhhee
Confidence 4699999999999976421 112222222 222222 1268999999999999999998877 889999
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.+++...
T Consensus 94 il~~~~~~ 101 (245)
T TIGR01738 94 VTVASSPC 101 (245)
T ss_pred eEecCCcc
Confidence 99998753
No 41
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.54 E-value=2.7e-07 Score=85.01 Aligned_cols=83 Identities=13% Similarity=-0.068 Sum_probs=61.6
Q ss_pred cccCCeEEEEEcCCC--CCCCcc----------hhh--cccChHHHHHHHHHHHHHHhcCCCCCCCCc-eEEEEecHHHH
Q psy15133 8 FHKGDYNVIVVDYGS--LVVVPC----------IDQ--ISWSPSFAGACIAQLAYYLSQHPRGVPPEK-LHLLGWSIGAH 72 (229)
Q Consensus 8 l~~~d~nVI~vDw~~--~a~~~~----------y~~--a~~~~~~vg~~la~~i~~L~~~~~~~~~~~-ihlIGhSLGAh 72 (229)
|..++|+||++|+.+ ++++.. |.. ..++....++.+.++++.| ++++ ++||||||||.
T Consensus 87 l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-------~~~~~~~lvG~S~Gg~ 159 (379)
T PRK00175 87 IDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL-------GITRLAAVVGGSMGGM 159 (379)
T ss_pred cCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh-------CCCCceEEEEECHHHH
Confidence 335689999999877 322210 000 1345667777777777766 5678 59999999999
Q ss_pred HHHHHHhhcccCCccccccccCCcccc
Q psy15133 73 IAGLTANYVEKGRKLGRITGLDPTIIF 99 (229)
Q Consensus 73 IAg~~g~~~~~~~~v~rIt~LDPAgp~ 99 (229)
||..++...+ ++|.+|+.+|++.+.
T Consensus 160 ia~~~a~~~p--~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 160 QALEWAIDYP--DRVRSALVIASSARL 184 (379)
T ss_pred HHHHHHHhCh--HhhhEEEEECCCccc
Confidence 9999999987 999999999987643
No 42
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.48 E-value=2.1e-07 Score=84.56 Aligned_cols=82 Identities=13% Similarity=0.149 Sum_probs=59.6
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHH-HHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFA-GACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~v-g~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
+|...+|+|+++||++.+.+.. ..+.... .+.+.+.++.+.+ ..+.+++++|||||||.++..++...+ +
T Consensus 89 ~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~---~~~~~~i~lvGhS~GG~i~~~~~~~~~--~ 159 (350)
T TIGR01836 89 GLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICR---TSKLDQISLLGICQGGTFSLCYAALYP--D 159 (350)
T ss_pred HHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHH---HhCCCcccEEEECHHHHHHHHHHHhCc--h
Confidence 3556789999999988764321 2233333 3446677777752 335689999999999999999888776 7
Q ss_pred ccccccccCCcc
Q psy15133 86 KLGRITGLDPTI 97 (229)
Q Consensus 86 ~v~rIt~LDPAg 97 (229)
+|.+++.+.|.-
T Consensus 160 ~v~~lv~~~~p~ 171 (350)
T TIGR01836 160 KIKNLVTMVTPV 171 (350)
T ss_pred heeeEEEecccc
Confidence 899999997654
No 43
>KOG4178|consensus
Probab=98.43 E-value=6.2e-07 Score=81.18 Aligned_cols=101 Identities=23% Similarity=0.199 Sum_probs=73.5
Q ss_pred cccCCeEEEEEcCCCCCCCcchhh-cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQ-ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~-a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
|....++||++|.++.+.+..-.. ..+++..+...+..+|+.| ..++++|+||++||-||..++..+| ++
T Consensus 67 la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-------g~~k~~lvgHDwGaivaw~la~~~P--er 137 (322)
T KOG4178|consen 67 LASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-------GLKKAFLVGHDWGAIVAWRLALFYP--ER 137 (322)
T ss_pred hhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-------ccceeEEEeccchhHHHHHHHHhCh--hh
Confidence 344459999999999998752222 3455667777777777766 5899999999999999999999988 99
Q ss_pred cccccccCCccccccCCCcccCcCCCCCCeEEEEE
Q psy15133 87 LGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIH 121 (229)
Q Consensus 87 v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIH 121 (229)
|.+++.+.-..+ .+..++++..-|.|.+-..
T Consensus 138 v~~lv~~nv~~~----~p~~~~~~~~~~~f~~~~y 168 (322)
T KOG4178|consen 138 VDGLVTLNVPFP----NPKLKPLDSSKAIFGKSYY 168 (322)
T ss_pred cceEEEecCCCC----CcccchhhhhccccCccce
Confidence 999998876655 2224455555555554433
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.40 E-value=9.4e-07 Score=79.44 Aligned_cols=87 Identities=16% Similarity=0.073 Sum_probs=63.3
Q ss_pred ccccCCeEEEEEcCCCCCCCcc-hhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPC-IDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~-y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
.|...+|.|++.||++++.+.. -.........+-..+..+++.+. ......+++|+||||||-||..+....+ .
T Consensus 56 ~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~---~~~~~~p~~l~gHSmGg~Ia~~~~~~~~--~ 130 (298)
T COG2267 56 DLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIA---EPDPGLPVFLLGHSMGGLIALLYLARYP--P 130 (298)
T ss_pred HHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHh---ccCCCCCeEEEEeCcHHHHHHHHHHhCC--c
Confidence 3567899999999999998851 11112223444555666666653 1245679999999999999999998876 7
Q ss_pred ccccccccCCccc
Q psy15133 86 KLGRITGLDPTII 98 (229)
Q Consensus 86 ~v~rIt~LDPAgp 98 (229)
+|.++++.-|+-.
T Consensus 131 ~i~~~vLssP~~~ 143 (298)
T COG2267 131 RIDGLVLSSPALG 143 (298)
T ss_pred cccEEEEECcccc
Confidence 8888888887743
No 45
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.40 E-value=9.9e-07 Score=82.26 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=61.6
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~ 86 (229)
|...+|+|+++||++++.+..-...........+.+..+++.|.. ..+..+++|+||||||.+|..++.+ + ...+
T Consensus 159 L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~---~~~~~~i~lvGhSmGG~ial~~a~~-p~~~~~ 234 (395)
T PLN02652 159 LTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRS---ENPGVPCFLFGHSTGGAVVLKAASY-PSIEDK 234 (395)
T ss_pred HHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHH---hCCCCCEEEEEECHHHHHHHHHHhc-cCcccc
Confidence 556789999999999997652111122445666788888888852 2233479999999999999988753 3 1247
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|..|+...|+.
T Consensus 235 v~glVL~sP~l 245 (395)
T PLN02652 235 LEGIVLTSPAL 245 (395)
T ss_pred cceEEEECccc
Confidence 89999988874
No 46
>PLN00021 chlorophyllase
Probab=98.38 E-value=1.1e-06 Score=79.59 Aligned_cols=89 Identities=17% Similarity=0.005 Sum_probs=53.5
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc---cC
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE---KG 84 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~---~~ 84 (229)
|...++.|+++|+.+.+... ..........+.+.+.+.+..+......+++++++|+||||||++|-.++...+ ..
T Consensus 75 Las~G~~VvapD~~g~~~~~-~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~ 153 (313)
T PLN00021 75 IASHGFIVVAPQLYTLAGPD-GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLP 153 (313)
T ss_pred HHhCCCEEEEecCCCcCCCC-chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccc
Confidence 44567999999998754321 111011111222222222222210012457789999999999999999987765 12
Q ss_pred CccccccccCCcc
Q psy15133 85 RKLGRITGLDPTI 97 (229)
Q Consensus 85 ~~v~rIt~LDPAg 97 (229)
.++..++++||..
T Consensus 154 ~~v~ali~ldPv~ 166 (313)
T PLN00021 154 LKFSALIGLDPVD 166 (313)
T ss_pred cceeeEEeecccc
Confidence 4789999999963
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.37 E-value=1.5e-06 Score=76.57 Aligned_cols=82 Identities=16% Similarity=0.077 Sum_probs=60.8
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
.|...+++|+++|+++++.+... ........+++...++.|.+ .--..++++|+||||||.+|..++.. + .+
T Consensus 52 ~l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~--~~~g~~~i~l~G~S~Gg~~a~~~a~~-~--~~ 123 (274)
T TIGR03100 52 RLAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFRE--AAPHLRRIVAWGLCDAASAALLYAPA-D--LR 123 (274)
T ss_pred HHHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHh--hCCCCCcEEEEEECHHHHHHHHHhhh-C--CC
Confidence 35567899999999999987522 12344556777788888852 11135789999999999999988754 2 58
Q ss_pred cccccccCCc
Q psy15133 87 LGRITGLDPT 96 (229)
Q Consensus 87 v~rIt~LDPA 96 (229)
|..|+.++|.
T Consensus 124 v~~lil~~p~ 133 (274)
T TIGR03100 124 VAGLVLLNPW 133 (274)
T ss_pred ccEEEEECCc
Confidence 9999999875
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.35 E-value=1.1e-06 Score=82.28 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=60.7
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+|+|+++|+++.+.+..... ..+..... ..+++.|. ....++.++|.++||||||++|..++...+ .+
T Consensus 217 ~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~---~avld~l~-~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p--~r 289 (414)
T PRK05077 217 YLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLLH---QAVLNALP-NVPWVDHTRVAAFGFRFGANVAVRLAYLEP--PR 289 (414)
T ss_pred HHHhCCCEEEEECCCCCCCCCCCCc-cccHHHHH---HHHHHHHH-hCcccCcccEEEEEEChHHHHHHHHHHhCC--cC
Confidence 4667789999999999887643211 11222222 34566664 223568899999999999999999987755 78
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|..++.++|.-
T Consensus 290 i~a~V~~~~~~ 300 (414)
T PRK05077 290 LKAVACLGPVV 300 (414)
T ss_pred ceEEEEECCcc
Confidence 99999998764
No 49
>KOG2564|consensus
Probab=98.25 E-value=1.6e-06 Score=77.33 Aligned_cols=86 Identities=19% Similarity=0.101 Sum_probs=63.4
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
++..+-+..++++|+++++.+-.-.......+...+++..+|+.|. +-.+.+|.||||||||.||-+.+..-. -.
T Consensus 96 el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~f----ge~~~~iilVGHSmGGaIav~~a~~k~-lp 170 (343)
T KOG2564|consen 96 ELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELF----GELPPQIILVGHSMGGAIAVHTAASKT-LP 170 (343)
T ss_pred HHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHh----ccCCCceEEEeccccchhhhhhhhhhh-ch
Confidence 3445667889999999999875433444556778888888888885 456788999999999999987664321 12
Q ss_pred ccccccccCCc
Q psy15133 86 KLGRITGLDPT 96 (229)
Q Consensus 86 ~v~rIt~LDPA 96 (229)
.+..||.+|-.
T Consensus 171 sl~Gl~viDVV 181 (343)
T KOG2564|consen 171 SLAGLVVIDVV 181 (343)
T ss_pred hhhceEEEEEe
Confidence 47777777764
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.24 E-value=2.9e-06 Score=91.48 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=61.6
Q ss_pred CCeEEEEEcCCCCCCCcchh-------hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCID-------QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEK 83 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~-------~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~ 83 (229)
++++||++|+++++.+..-. ....+.+.+++.+.++++.| ..++++||||||||.||..++.+.+
T Consensus 1396 ~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-------~~~~v~LvGhSmGG~iAl~~A~~~P- 1467 (1655)
T PLN02980 1396 GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-------TPGKVTLVGYSMGARIALYMALRFS- 1467 (1655)
T ss_pred CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-------CCCCEEEEEECHHHHHHHHHHHhCh-
Confidence 46999999999998764211 11335667777777777765 4679999999999999999999887
Q ss_pred CCccccccccCCcc
Q psy15133 84 GRKLGRITGLDPTI 97 (229)
Q Consensus 84 ~~~v~rIt~LDPAg 97 (229)
++|.+++.+++..
T Consensus 1468 -~~V~~lVlis~~p 1480 (1655)
T PLN02980 1468 -DKIEGAVIISGSP 1480 (1655)
T ss_pred -HhhCEEEEECCCC
Confidence 8999999998753
No 51
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.19 E-value=5.1e-06 Score=67.14 Aligned_cols=74 Identities=24% Similarity=0.180 Sum_probs=56.2
Q ss_pred eEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccc
Q psy15133 13 YNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITG 92 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~ 92 (229)
++|+.+|+++++.+. .. ........+.+..+++.+ ..++++|+|||+||.++..++...+ .++.+++.
T Consensus 51 ~~~~~~d~~g~g~s~--~~-~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~~~~~~~~~p--~~~~~~v~ 118 (282)
T COG0596 51 YRVIAPDLRGHGRSD--PA-GYSLSAYADDLAALLDAL-------GLEKVVLVGHSMGGAVALALALRHP--DRVRGLVL 118 (282)
T ss_pred eEEEEecccCCCCCC--cc-cccHHHHHHHHHHHHHHh-------CCCceEEEEecccHHHHHHHHHhcc--hhhheeeE
Confidence 999999999888774 00 111222355666666655 4556999999999999999999987 79999999
Q ss_pred cCCccc
Q psy15133 93 LDPTII 98 (229)
Q Consensus 93 LDPAgp 98 (229)
++|..+
T Consensus 119 ~~~~~~ 124 (282)
T COG0596 119 IGPAPP 124 (282)
T ss_pred ecCCCC
Confidence 998765
No 52
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.18 E-value=4e-06 Score=72.88 Aligned_cols=107 Identities=17% Similarity=0.172 Sum_probs=76.6
Q ss_pred eEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-c-C-----C
Q psy15133 13 YNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-K-G-----R 85 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~-~-----~ 85 (229)
..||.+.|+..+....|.....+...-+..++++|..|.+ .....+||||+||||+.|...+-+.+. . . .
T Consensus 49 ~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~---~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~ 125 (233)
T PF05990_consen 49 GVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLAR---APGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKA 125 (233)
T ss_pred ceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh---ccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHh
Confidence 3899999999887666877777788889999999999962 346789999999999999988876654 1 1 3
Q ss_pred ccccccccCCcccc--ccCCCcccCcCCCCCCeEEEEEcCCC
Q psy15133 86 KLGRITGLDPTIIF--YQTNNKTKDLDSTDALFVDVIHTAAG 125 (229)
Q Consensus 86 ~v~rIt~LDPAgp~--f~~~~~~~rL~~~DA~fVdvIHT~~~ 125 (229)
++..|+.+-|.-+. |... ..++. .-++-|-|.++..+
T Consensus 126 ~~~~viL~ApDid~d~f~~~--~~~~~-~~~~~itvy~s~~D 164 (233)
T PF05990_consen 126 RFDNVILAAPDIDNDVFRSQ--LPDLG-SSARRITVYYSRND 164 (233)
T ss_pred hhheEEEECCCCCHHHHHHH--HHHHh-hcCCCEEEEEcCCc
Confidence 67788888776554 2211 11221 23466666666543
No 53
>PLN02511 hydrolase
Probab=98.16 E-value=3.1e-06 Score=78.48 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=54.4
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc--
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK-- 86 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~-- 86 (229)
...+|+||++|+++++.++.... ........+++.++++.|.. ..+..++++|||||||.|+..++.+.+ ++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~-~~~~~~~~~Dl~~~i~~l~~---~~~~~~~~lvG~SlGg~i~~~yl~~~~--~~~~ 199 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTP-QFYSASFTGDLRQVVDHVAG---RYPSANLYAAGWSLGANILVNYLGEEG--ENCP 199 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCc-CEEcCCchHHHHHHHHHHHH---HCCCCCEEEEEechhHHHHHHHHHhcC--CCCC
Confidence 45789999999999987753211 11112234567777777751 234468999999999999988777665 44
Q ss_pred cccccccC
Q psy15133 87 LGRITGLD 94 (229)
Q Consensus 87 v~rIt~LD 94 (229)
|..++++.
T Consensus 200 v~~~v~is 207 (388)
T PLN02511 200 LSGAVSLC 207 (388)
T ss_pred ceEEEEEC
Confidence 66666554
No 54
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.14 E-value=1.5e-05 Score=67.17 Aligned_cols=79 Identities=20% Similarity=0.136 Sum_probs=58.5
Q ss_pred eEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCcccccc
Q psy15133 13 YNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGRIT 91 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt 91 (229)
++|+.+++++..... ....+++.++...++-|.... +-..++|+|||+||.||-.+++++. .+.++.+|+
T Consensus 28 ~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~------~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~ 98 (229)
T PF00975_consen 28 IGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQ------PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLI 98 (229)
T ss_dssp EEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHT------SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEE
T ss_pred EEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhC------CCCCeeehccCccHHHHHHHHHHHHHhhhccCceE
Confidence 899999999886332 223455666655555554442 2239999999999999999999997 567799999
Q ss_pred ccCCccccc
Q psy15133 92 GLDPTIIFY 100 (229)
Q Consensus 92 ~LDPAgp~f 100 (229)
.+|...|..
T Consensus 99 liD~~~p~~ 107 (229)
T PF00975_consen 99 LIDSPPPSI 107 (229)
T ss_dssp EESCSSTTC
T ss_pred EecCCCCCc
Confidence 999777765
No 55
>PRK11071 esterase YqiA; Provisional
Probab=98.13 E-value=8.1e-06 Score=68.50 Aligned_cols=64 Identities=19% Similarity=0.174 Sum_probs=46.9
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
.+++|+++|++++. ...++.+.++++.+ ..++++||||||||.||..++...+ . ++
T Consensus 31 ~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~~--~---~~ 86 (190)
T PRK11071 31 PDIEMIVPQLPPYP------------ADAAELLESLVLEH-------GGDPLGLVGSSLGGYYATWLSQCFM--L---PA 86 (190)
T ss_pred CCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-------CCCCeEEEEECHHHHHHHHHHHHcC--C---CE
Confidence 47999999999652 12344444454443 4578999999999999999998875 2 46
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.++|+..
T Consensus 87 vl~~~~~~ 94 (190)
T PRK11071 87 VVVNPAVR 94 (190)
T ss_pred EEECCCCC
Confidence 77888744
No 56
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.13 E-value=3.6e-06 Score=65.35 Aligned_cols=72 Identities=19% Similarity=0.281 Sum_probs=53.0
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
|.+.+++|+++|+++.+.+... ..+.++++.+.+ ...+.+++.|+||||||.++..++... .+|
T Consensus 22 l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~v 85 (145)
T PF12695_consen 22 LAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRA--GYPDPDRIILIGHSMGGAIAANLAARN---PRV 85 (145)
T ss_dssp HHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHH--HHCTCCEEEEEEETHHHHHHHHHHHHS---TTE
T ss_pred HHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHh--hcCCCCcEEEEEEccCcHHHHHHhhhc---cce
Confidence 4556999999999988865211 133444444310 112789999999999999999998864 489
Q ss_pred ccccccCC
Q psy15133 88 GRITGLDP 95 (229)
Q Consensus 88 ~rIt~LDP 95 (229)
..++.+.|
T Consensus 86 ~~~v~~~~ 93 (145)
T PF12695_consen 86 KAVVLLSP 93 (145)
T ss_dssp SEEEEESE
T ss_pred eEEEEecC
Confidence 99999999
No 57
>PRK05855 short chain dehydrogenase; Validated
Probab=98.07 E-value=1.1e-05 Score=76.60 Aligned_cols=77 Identities=12% Similarity=0.145 Sum_probs=52.3
Q ss_pred cCCeEEEEEcCCCCCCCcchh-hcccChHHHHHHHHHHHHHHhcCCCCCCCC-ceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCID-QISWSPSFAGACIAQLAYYLSQHPRGVPPE-KLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~-~a~~~~~~vg~~la~~i~~L~~~~~~~~~~-~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
..+++||++|+++++.+..-. .........++.+..+++.+ .++ +++||||||||.++..++.......++
T Consensus 49 ~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v 121 (582)
T PRK05855 49 ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV-------SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRI 121 (582)
T ss_pred hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh-------CCCCcEEEEecChHHHHHHHHHhCccchhhh
Confidence 457999999999999774211 11345677788888888876 234 499999999999997776552212344
Q ss_pred cccccc
Q psy15133 88 GRITGL 93 (229)
Q Consensus 88 ~rIt~L 93 (229)
..++.+
T Consensus 122 ~~~~~~ 127 (582)
T PRK05855 122 ASFTSV 127 (582)
T ss_pred hhheec
Confidence 444443
No 58
>KOG1454|consensus
Probab=98.06 E-value=1.4e-05 Score=72.73 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=53.6
Q ss_pred CeEEEEEcCCCCCCCcchhhcc-cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQIS-WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~-~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++.|.++|..+++.+...+... +..+.....+-.+.. .+..+++||+||||||.+|..+|..+| +.|..|
T Consensus 86 ~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~-------~~~~~~~~lvghS~Gg~va~~~Aa~~P--~~V~~l 156 (326)
T KOG1454|consen 86 GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVK-------EVFVEPVSLVGHSLGGIVALKAAAYYP--ETVDSL 156 (326)
T ss_pred ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHH-------hhcCcceEEEEeCcHHHHHHHHHHhCc--ccccce
Confidence 5899999999988443333222 223333333322222 345677999999999999999999998 999999
Q ss_pred cccCCcc
Q psy15133 91 TGLDPTI 97 (229)
Q Consensus 91 t~LDPAg 97 (229)
++||=.+
T Consensus 157 v~~~~~~ 163 (326)
T KOG1454|consen 157 VLLDLLG 163 (326)
T ss_pred eeecccc
Confidence 9777333
No 59
>PRK10985 putative hydrolase; Provisional
Probab=98.05 E-value=8.4e-06 Score=73.38 Aligned_cols=86 Identities=9% Similarity=0.033 Sum_probs=53.2
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+++|+++|+++.+.++.-......... .+++..+++.|.+ ..+.++++++||||||.|+..+....+...+
T Consensus 82 ~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~-~~D~~~~i~~l~~---~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~ 157 (324)
T PRK10985 82 AAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGE-TEDARFFLRWLQR---EFGHVPTAAVGYSLGGNMLACLLAKEGDDLP 157 (324)
T ss_pred HHHHCCCEEEEEeCCCCCCCccCCcceECCCc-hHHHHHHHHHHHH---hCCCCCEEEEEecchHHHHHHHHHhhCCCCC
Confidence 35678999999999998755421111111111 2455666666642 2355789999999999976655444331124
Q ss_pred cccccccCCc
Q psy15133 87 LGRITGLDPT 96 (229)
Q Consensus 87 v~rIt~LDPA 96 (229)
|.+++.+.|.
T Consensus 158 ~~~~v~i~~p 167 (324)
T PRK10985 158 LDAAVIVSAP 167 (324)
T ss_pred ccEEEEEcCC
Confidence 7777777664
No 60
>PRK10566 esterase; Provisional
Probab=97.98 E-value=2.3e-05 Score=66.88 Aligned_cols=74 Identities=12% Similarity=-0.040 Sum_probs=49.5
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccC-------hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHh
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWS-------PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTAN 79 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~-------~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~ 79 (229)
+|...+|+|+++|+++.+.+.. ...... .....+.+..+++.|.+ ...++.++++|+||||||++|..++.
T Consensus 49 ~l~~~G~~v~~~d~~g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 49 ALAQAGFRVIMPDAPMHGARFS-GDEARRLNHFWQILLQNMQEFPTLRAAIRE-EGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHhCCCEEEEecCCcccccCC-CccccchhhHHHHHHHHHHHHHHHHHHHHh-cCCcCccceeEEeecccHHHHHHHHH
Confidence 4566789999999998765310 000000 11223455666777752 23478899999999999999999887
Q ss_pred hcc
Q psy15133 80 YVE 82 (229)
Q Consensus 80 ~~~ 82 (229)
..+
T Consensus 127 ~~~ 129 (249)
T PRK10566 127 RHP 129 (249)
T ss_pred hCC
Confidence 654
No 61
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.98 E-value=2.1e-05 Score=73.27 Aligned_cols=81 Identities=21% Similarity=0.068 Sum_probs=60.0
Q ss_pred ccccCCeEEEEEcCCCCCC--Ccc----------------hh--hcccChHHHHHHHHHHHHHHhcCCCCCCCCceE-EE
Q psy15133 7 YFHKGDYNVIVVDYGSLVV--VPC----------------ID--QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLH-LL 65 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~--~~~----------------y~--~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ih-lI 65 (229)
.|....|-||++|.-+... +|+ |. ....+++..++.+.++++.| ++++++ ||
T Consensus 94 ~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l-------gi~~~~~vv 166 (389)
T PRK06765 94 AIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL-------GIARLHAVM 166 (389)
T ss_pred CcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc-------CCCCceEEE
Confidence 4667889999999875432 111 10 11245666677777776655 678997 99
Q ss_pred EecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 66 GWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 66 GhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
||||||.||...+.+.| ++|.+|+.+..+
T Consensus 167 G~SmGG~ial~~a~~~P--~~v~~lv~ia~~ 195 (389)
T PRK06765 167 GPSMGGMQAQEWAVHYP--HMVERMIGVIGN 195 (389)
T ss_pred EECHHHHHHHHHHHHCh--HhhheEEEEecC
Confidence 99999999999999988 999999999665
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.96 E-value=1.3e-05 Score=77.57 Aligned_cols=82 Identities=9% Similarity=0.121 Sum_probs=54.2
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHH-----HHhhc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGL-----TANYV 81 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~-----~g~~~ 81 (229)
||..++++|+++||++.+.+..... -..++.+.+.+.|+.+. ...+.+++|+|||||||.++.. ++...
T Consensus 215 ~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~---~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~ 288 (532)
T TIGR01838 215 WLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVE---AITGEKQVNCVGYCIGGTLLSTALAYLAARGD 288 (532)
T ss_pred HHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHH---HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCC
Confidence 4556789999999998775431110 11234445666666664 1347789999999999998633 33232
Q ss_pred ccCCccccccccCCc
Q psy15133 82 EKGRKLGRITGLDPT 96 (229)
Q Consensus 82 ~~~~~v~rIt~LDPA 96 (229)
+ ++|..+|.+...
T Consensus 289 ~--~rv~slvll~t~ 301 (532)
T TIGR01838 289 D--KRIKSATFFTTL 301 (532)
T ss_pred C--CccceEEEEecC
Confidence 3 689999987654
No 63
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.95 E-value=1.5e-05 Score=72.26 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=57.2
Q ss_pred ccccCCeEEEEEcCCCCCCCcchh---hcccChHHHHHHHHHHHHHHhcCC----------------CCCC-CCceEEEE
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCID---QISWSPSFAGACIAQLAYYLSQHP----------------RGVP-PEKLHLLG 66 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~---~a~~~~~~vg~~la~~i~~L~~~~----------------~~~~-~~~ihlIG 66 (229)
+|...+++|+++|+++++.+.... ....+...+.+++.++++.+.++. ...+ -..+.|+|
T Consensus 69 ~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 69 NFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 456789999999999999764221 111345666777777777664100 0111 24699999
Q ss_pred ecHHHHHHHHHHhhcc-cC-----CccccccccCCc
Q psy15133 67 WSIGAHIAGLTANYVE-KG-----RKLGRITGLDPT 96 (229)
Q Consensus 67 hSLGAhIAg~~g~~~~-~~-----~~v~rIt~LDPA 96 (229)
|||||.|+..++..++ .. ..|..++.+-|+
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccc
Confidence 9999999998876543 10 135555555554
No 64
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.95 E-value=1.6e-05 Score=66.76 Aligned_cols=88 Identities=15% Similarity=0.127 Sum_probs=60.6
Q ss_pred cccccCCeEEEEEcCCCCCCCc-chhh-cccC-hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVP-CIDQ-ISWS-PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~-~y~~-a~~~-~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.||...+|.|+.+|.++.+... .+.. ...+ -....+++.+.++.|.+ ...+++++|.|+|||.||++|..++...+
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~iD~~ri~i~G~S~GG~~a~~~~~~~~ 86 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK-QYYIDPDRIGIMGHSYGGYLALLAATQHP 86 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH-TTSEEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc-cccccceeEEEEcccccccccchhhcccc
Confidence 4677899999999999876432 1111 1111 12334566777788863 34789999999999999999999998765
Q ss_pred cCCccccccccCCc
Q psy15133 83 KGRKLGRITGLDPT 96 (229)
Q Consensus 83 ~~~~v~rIt~LDPA 96 (229)
++...++...|.
T Consensus 87 --~~f~a~v~~~g~ 98 (213)
T PF00326_consen 87 --DRFKAAVAGAGV 98 (213)
T ss_dssp --CGSSEEEEESE-
T ss_pred --eeeeeeecccee
Confidence 777777776664
No 65
>PRK13604 luxD acyl transferase; Provisional
Probab=97.87 E-value=3.6e-05 Score=69.75 Aligned_cols=85 Identities=20% Similarity=0.194 Sum_probs=58.7
Q ss_pred cccccCCeEEEEEcCCCC-CCCc-chhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhccc
Q psy15133 6 AYFHKGDYNVIVVDYGSL-VVVP-CIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEK 83 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~-a~~~-~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~ 83 (229)
.||...+++|+..|++++ +.+. .+.... +..-..++...|++|.+ . ..+++.|+||||||-+|-.++..
T Consensus 58 ~~La~~G~~vLrfD~rg~~GeS~G~~~~~t--~s~g~~Dl~aaid~lk~--~--~~~~I~LiG~SmGgava~~~A~~--- 128 (307)
T PRK13604 58 EYLSSNGFHVIRYDSLHHVGLSSGTIDEFT--MSIGKNSLLTVVDWLNT--R--GINNLGLIAASLSARIAYEVINE--- 128 (307)
T ss_pred HHHHHCCCEEEEecCCCCCCCCCCccccCc--ccccHHHHHHHHHHHHh--c--CCCceEEEEECHHHHHHHHHhcC---
Confidence 367789999999999765 5442 231111 11123566677888862 2 45789999999999998766654
Q ss_pred CCccccccccCCccccc
Q psy15133 84 GRKLGRITGLDPTIIFY 100 (229)
Q Consensus 84 ~~~v~rIt~LDPAgp~f 100 (229)
.++.-++.+-|+..+-
T Consensus 129 -~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 129 -IDLSFLITAVGVVNLR 144 (307)
T ss_pred -CCCCEEEEcCCcccHH
Confidence 3488899998887643
No 66
>PLN02872 triacylglycerol lipase
Probab=97.85 E-value=1.7e-05 Score=74.07 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=61.2
Q ss_pred cccCCeEEEEEcCCCCCCCc---chhh---c--ccChHHHH-HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHH
Q psy15133 8 FHKGDYNVIVVDYGSLVVVP---CIDQ---I--SWSPSFAG-ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTA 78 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~---~y~~---a--~~~~~~vg-~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g 78 (229)
|...+|.|+++||++...+. .+.. . .......+ .++.++|+.+.+ ...+++++|||||||.++..+.
T Consensus 103 La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~----~~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 103 LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS----ITNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh----ccCCceEEEEECHHHHHHHHHh
Confidence 55678999999999864220 0110 0 13345666 788999999852 2347999999999999887555
Q ss_pred hhcc-cCCccccccccCCccccc
Q psy15133 79 NYVE-KGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 79 ~~~~-~~~~v~rIt~LDPAgp~f 100 (229)
..+ ..++|..+++|.|+..+-
T Consensus 179 -~~p~~~~~v~~~~~l~P~~~~~ 200 (395)
T PLN02872 179 -TQPNVVEMVEAAALLCPISYLD 200 (395)
T ss_pred -hChHHHHHHHHHHHhcchhhhc
Confidence 333 225799999999997653
No 67
>KOG2382|consensus
Probab=97.83 E-value=3e-05 Score=70.29 Aligned_cols=87 Identities=15% Similarity=0.032 Sum_probs=67.1
Q ss_pred cccccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHH-HHHHHHHhhcc
Q psy15133 4 PIAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGA-HIAGLTANYVE 82 (229)
Q Consensus 4 ~~a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGA-hIAg~~g~~~~ 82 (229)
.+++-+.-+..|++||.+.+|.++. ....+...++..+..||+.-. ......++.|+|||||| +++.......+
T Consensus 72 ~k~Ls~~l~~~v~~vd~RnHG~Sp~--~~~h~~~~ma~dv~~Fi~~v~---~~~~~~~~~l~GHsmGG~~~~m~~t~~~p 146 (315)
T KOG2382|consen 72 AKNLSRKLGRDVYAVDVRNHGSSPK--ITVHNYEAMAEDVKLFIDGVG---GSTRLDPVVLLGHSMGGVKVAMAETLKKP 146 (315)
T ss_pred HHHhcccccCceEEEecccCCCCcc--ccccCHHHHHHHHHHHHHHcc---cccccCCceecccCcchHHHHHHHHHhcC
Confidence 3445556667999999999999874 346677788888888887652 12357899999999999 77777776665
Q ss_pred cCCccccccccCCcc
Q psy15133 83 KGRKLGRITGLDPTI 97 (229)
Q Consensus 83 ~~~~v~rIt~LDPAg 97 (229)
..+.|++.+|-+.
T Consensus 147 --~~~~rliv~D~sP 159 (315)
T KOG2382|consen 147 --DLIERLIVEDISP 159 (315)
T ss_pred --cccceeEEEecCC
Confidence 8899999999775
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.79 E-value=7.3e-05 Score=65.81 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=34.1
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
+++.+++.|+||||||++|..++...+ +.+..++++.|+
T Consensus 134 ~~~~~~~~~~G~S~GG~~a~~~a~~~p--~~~~~~~~~~~~ 172 (275)
T TIGR02821 134 PLDGERQGITGHSMGGHGALVIALKNP--DRFKSVSAFAPI 172 (275)
T ss_pred CCCCCceEEEEEChhHHHHHHHHHhCc--ccceEEEEECCc
Confidence 678899999999999999999998877 788888877666
No 69
>PRK10162 acetyl esterase; Provisional
Probab=97.79 E-value=4.3e-05 Score=68.94 Aligned_cols=82 Identities=20% Similarity=0.073 Sum_probs=51.2
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-c---CC
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-K---GR 85 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~---~~ 85 (229)
..++.||.|||+..-.. .|+.+..+...+-+.+.+..+ ..+++.++|.|+|+|+||++|..++..+. . +.
T Consensus 110 ~~g~~Vv~vdYrlape~-~~p~~~~D~~~a~~~l~~~~~-----~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~ 183 (318)
T PRK10162 110 YSGCTVIGIDYTLSPEA-RFPQAIEEIVAVCCYFHQHAE-----DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCG 183 (318)
T ss_pred HcCCEEEEecCCCCCCC-CCCCcHHHHHHHHHHHHHhHH-----HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCcc
Confidence 35899999999854332 254432222222222222111 23778899999999999999999987654 1 14
Q ss_pred ccccccccCCcc
Q psy15133 86 KLGRITGLDPTI 97 (229)
Q Consensus 86 ~v~rIt~LDPAg 97 (229)
++..++.+.|..
T Consensus 184 ~~~~~vl~~p~~ 195 (318)
T PRK10162 184 KVAGVLLWYGLY 195 (318)
T ss_pred ChhheEEECCcc
Confidence 567777776654
No 70
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.76 E-value=6.8e-05 Score=63.31 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=58.4
Q ss_pred cccCCeEEEEEcCCCCCCCc-c---hhhcc-cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVP-C---IDQIS-WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~-~---y~~a~-~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+.+.++.|+++|.++.+... + +.... .....-...+.++++.|.+ ...++.+++.|+|||+||.+|..++...+
T Consensus 39 a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~id~~~i~l~G~S~Gg~~a~~~a~~~p 117 (212)
T TIGR01840 39 ADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA-NYSIDPNRVYVTGLSAGGGMTAVLGCTYP 117 (212)
T ss_pred HHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH-hcCcChhheEEEEECHHHHHHHHHHHhCc
Confidence 44578999999998764221 1 11100 0011123445677777762 34788899999999999999999998876
Q ss_pred cCCccccccccCCcc
Q psy15133 83 KGRKLGRITGLDPTI 97 (229)
Q Consensus 83 ~~~~v~rIt~LDPAg 97 (229)
+++..++.+....
T Consensus 118 --~~~~~~~~~~g~~ 130 (212)
T TIGR01840 118 --DVFAGGASNAGLP 130 (212)
T ss_pred --hhheEEEeecCCc
Confidence 7788887776543
No 71
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.75 E-value=9.5e-05 Score=63.93 Aligned_cols=83 Identities=16% Similarity=0.256 Sum_probs=52.6
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~r 89 (229)
..++++.+|+........-.....+.+.+.+.+..+++.+. ...-+.+++.||||||||-||-.+....+ ...+|..
T Consensus 38 ~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~--~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~ 115 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYK--SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKT 115 (225)
T ss_pred cceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhh--hccCCCCceEEEEEchhhHHHHHHHhccccccccEEE
Confidence 35899999997764332101111233445555555444442 23557899999999999999988776543 2357888
Q ss_pred ccccCC
Q psy15133 90 ITGLDP 95 (229)
Q Consensus 90 It~LDP 95 (229)
|+.|..
T Consensus 116 iitl~t 121 (225)
T PF07819_consen 116 IITLGT 121 (225)
T ss_pred EEEEcC
Confidence 888764
No 72
>KOG1455|consensus
Probab=97.73 E-value=0.00012 Score=65.85 Aligned_cols=90 Identities=14% Similarity=0.038 Sum_probs=66.5
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
|...++-|.++||.+++.+.-....+.+...+.+++-.+++.+.. .....--..-|.||||||.||..++..-| +..
T Consensus 78 l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p--~~w 154 (313)
T KOG1455|consen 78 LAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALKDP--NFW 154 (313)
T ss_pred HHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhhCC--ccc
Confidence 556789999999999998864333455667777777777776542 22334446789999999999999998855 777
Q ss_pred ccccccCCccccc
Q psy15133 88 GRITGLDPTIIFY 100 (229)
Q Consensus 88 ~rIt~LDPAgp~f 100 (229)
...++.-|.-+.-
T Consensus 155 ~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 155 DGAILVAPMCKIS 167 (313)
T ss_pred ccceeeecccccC
Confidence 8888877765443
No 73
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.66 E-value=9.3e-05 Score=71.60 Aligned_cols=88 Identities=18% Similarity=0.053 Sum_probs=64.9
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+|.|+++|.++.+.+..-. .... ....+++.++|++|.+ ......+|.++|||+||.++..++...+ .+
T Consensus 48 ~l~~~Gy~vv~~D~RG~g~S~g~~-~~~~-~~~~~D~~~~i~~l~~--q~~~~~~v~~~G~S~GG~~a~~~a~~~~--~~ 121 (550)
T TIGR00976 48 WFVAQGYAVVIQDTRGRGASEGEF-DLLG-SDEAADGYDLVDWIAK--QPWCDGNVGMLGVSYLAVTQLLAAVLQP--PA 121 (550)
T ss_pred HHHhCCcEEEEEeccccccCCCce-EecC-cccchHHHHHHHHHHh--CCCCCCcEEEEEeChHHHHHHHHhccCC--Cc
Confidence 456789999999999988764211 1111 3456788888999862 2334479999999999999999998865 78
Q ss_pred cccccccCCccccc
Q psy15133 87 LGRITGLDPTIIFY 100 (229)
Q Consensus 87 v~rIt~LDPAgp~f 100 (229)
|..|+...+..-++
T Consensus 122 l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 122 LRAIAPQEGVWDLY 135 (550)
T ss_pred eeEEeecCcccchh
Confidence 88888877775544
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=97.66 E-value=8.8e-05 Score=65.82 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=34.1
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
.++.++++|+||||||++|..++.+.+ +++..++++.|.
T Consensus 139 ~~~~~~~~i~G~S~GG~~a~~~a~~~p--~~~~~~~~~~~~ 177 (283)
T PLN02442 139 QLDTSRASIFGHSMGGHGALTIYLKNP--DKYKSVSAFAPI 177 (283)
T ss_pred hcCCCceEEEEEChhHHHHHHHHHhCc--hhEEEEEEECCc
Confidence 467899999999999999999998876 888888888776
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.65 E-value=9.9e-05 Score=76.18 Aligned_cols=82 Identities=18% Similarity=0.254 Sum_probs=48.3
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|....++|+++||..-.....+. ..+.......+.+.++.+. .+..+++|||||||||.++..++...+ +++
T Consensus 94 ~L~~~g~~v~~~d~G~~~~~~~~~--~~~l~~~i~~l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa~~~-~~~ 166 (994)
T PRK07868 94 ILHRAGLDPWVIDFGSPDKVEGGM--ERNLADHVVALSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAAYRR-SKD 166 (994)
T ss_pred HHHHCCCEEEEEcCCCCChhHcCc--cCCHHHHHHHHHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHHhcC-CCc
Confidence 455678999999995322111110 1122211223334444332 123468999999999999977665433 368
Q ss_pred cccccccCC
Q psy15133 87 LGRITGLDP 95 (229)
Q Consensus 87 v~rIt~LDP 95 (229)
|.+|+.+++
T Consensus 167 v~~lvl~~~ 175 (994)
T PRK07868 167 IASIVTFGS 175 (994)
T ss_pred cceEEEEec
Confidence 999987544
No 76
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.63 E-value=0.00017 Score=64.61 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=67.5
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
+|...+.+||.+.|++++.++.|+.-.++-..-..++..|++.| ++. +++..||||.|.-.|..++..++
T Consensus 57 ~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l-----~i~-~~~i~~gHSrGcenal~la~~~~---- 126 (297)
T PF06342_consen 57 PLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDEL-----GIK-GKLIFLGHSRGCENALQLAVTHP---- 126 (297)
T ss_pred HHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHc-----CCC-CceEEEEeccchHHHHHHHhcCc----
Confidence 46778999999999999998877766666666677888888887 444 78999999999999999998764
Q ss_pred cccccccCCccc
Q psy15133 87 LGRITGLDPTII 98 (229)
Q Consensus 87 v~rIt~LDPAgp 98 (229)
+-.++.+.|.|-
T Consensus 127 ~~g~~lin~~G~ 138 (297)
T PF06342_consen 127 LHGLVLINPPGL 138 (297)
T ss_pred cceEEEecCCcc
Confidence 567888888874
No 77
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.48 E-value=0.00066 Score=55.04 Aligned_cols=81 Identities=17% Similarity=0.048 Sum_probs=54.1
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~r 89 (229)
++++|+.+|.++...... .......+...+.+.+... ....+++++|||+||.+|..++..+. .+.++..
T Consensus 24 ~~~~v~~~~~~g~~~~~~---~~~~~~~~~~~~~~~l~~~------~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~ 94 (212)
T smart00824 24 GRRDVSALPLPGFGPGEP---LPASADALVEAQAEAVLRA------AGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAA 94 (212)
T ss_pred CCccEEEecCCCCCCCCC---CCCCHHHHHHHHHHHHHHh------cCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcE
Confidence 468999999988765421 1222333333333333322 13457999999999999999998775 3467888
Q ss_pred ccccCCccccc
Q psy15133 90 ITGLDPTIIFY 100 (229)
Q Consensus 90 It~LDPAgp~f 100 (229)
++.+|+..|..
T Consensus 95 l~~~~~~~~~~ 105 (212)
T smart00824 95 VVLLDTYPPGD 105 (212)
T ss_pred EEEEccCCCCC
Confidence 88888876643
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.39 E-value=0.00065 Score=60.09 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=63.9
Q ss_pred cCCeEEEEEcCCCCCCCcchh-----hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-c
Q psy15133 10 KGDYNVIVVDYGSLVVVPCID-----QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-K 83 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~-----~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~ 83 (229)
...+.|+++...++...+.-. ...++...--+.-.++|+.+.. .....-.+++|||||+||.|+..+-++++ .
T Consensus 30 ~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~-~~~~~~~~liLiGHSIGayi~levl~r~~~~ 108 (266)
T PF10230_consen 30 NPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP-QKNKPNVKLILIGHSIGAYIALEVLKRLPDL 108 (266)
T ss_pred CCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh-hhcCCCCcEEEEeCcHHHHHHHHHHHhcccc
Confidence 368999999999987664321 1122333333333444444431 11125678999999999999999999875 3
Q ss_pred CCccccccccCCccccccCCCcccCcC
Q psy15133 84 GRKLGRITGLDPTIIFYQTNNKTKDLD 110 (229)
Q Consensus 84 ~~~v~rIt~LDPAgp~f~~~~~~~rL~ 110 (229)
..+|.+..+|=|.---...++...+|.
T Consensus 109 ~~~V~~~~lLfPTi~~ia~Sp~G~~l~ 135 (266)
T PF10230_consen 109 KFRVKKVILLFPTIEDIAKSPNGRRLT 135 (266)
T ss_pred CCceeEEEEeCCccccccCCchhHHHH
Confidence 468999999988755444333333444
No 79
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.35 E-value=0.00016 Score=60.21 Aligned_cols=81 Identities=22% Similarity=0.210 Sum_probs=53.8
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcC--CCCCCCCceEEEEecHHHHHHHHHHhhcc-c-
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQH--PRGVPPEKLHLLGWSIGAHIAGLTANYVE-K- 83 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~--~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~- 83 (229)
....++.|+++|++-.-.. .|+ ..-+++.+.+++|.++ ..+++.++|.|+|+|-|||+|..++.... .
T Consensus 25 a~~~g~~v~~~~Yrl~p~~-~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~ 96 (211)
T PF07859_consen 25 AAERGFVVVSIDYRLAPEA-PFP-------AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG 96 (211)
T ss_dssp HHHHTSEEEEEE---TTTS-STT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred HhhccEEEEEeeccccccc-ccc-------ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc
Confidence 3346899999999854322 133 2335555555665421 12688999999999999999999998766 2
Q ss_pred CCccccccccCCc
Q psy15133 84 GRKLGRITGLDPT 96 (229)
Q Consensus 84 ~~~v~rIt~LDPA 96 (229)
..+++.++.+.|.
T Consensus 97 ~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 97 LPKPKGIILISPW 109 (211)
T ss_dssp TCHESEEEEESCH
T ss_pred ccchhhhhccccc
Confidence 2357888888884
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.21 E-value=0.0017 Score=54.91 Aligned_cols=84 Identities=17% Similarity=0.119 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccccCCCcccCcCCCCCC
Q psy15133 36 PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQTNNKTKDLDSTDAL 115 (229)
Q Consensus 36 ~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~ 115 (229)
+....+.|.++|+.+. ..+++.++|.|+|+|.||.+|..++.+.+ ++++.+++|-...|..... ..+.......
T Consensus 83 i~~s~~~l~~li~~~~--~~~i~~~ri~l~GFSQGa~~al~~~l~~p--~~~~gvv~lsG~~~~~~~~--~~~~~~~~~~ 156 (216)
T PF02230_consen 83 IEESAERLDELIDEEV--AYGIDPSRIFLGGFSQGAAMALYLALRYP--EPLAGVVALSGYLPPESEL--EDRPEALAKT 156 (216)
T ss_dssp HHHHHHHHHHHHHHHH--HTT--GGGEEEEEETHHHHHHHHHHHCTS--STSSEEEEES---TTGCCC--HCCHCCCCTS
T ss_pred HHHHHHHHHHHHHHHH--HcCCChhheehhhhhhHHHHHHHHHHHcC--cCcCEEEEeeccccccccc--cccccccCCC
Confidence 3445667778888765 34799999999999999999999999987 8999999998877765322 2222222244
Q ss_pred eEEEEEcCCC
Q psy15133 116 FVDVIHTAAG 125 (229)
Q Consensus 116 fVdvIHT~~~ 125 (229)
-|=++|-..+
T Consensus 157 pi~~~hG~~D 166 (216)
T PF02230_consen 157 PILIIHGDED 166 (216)
T ss_dssp -EEEEEETT-
T ss_pred cEEEEecCCC
Confidence 5667775543
No 81
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.14 E-value=0.0013 Score=57.05 Aligned_cols=83 Identities=16% Similarity=0.122 Sum_probs=64.1
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
.||+..+|.|-+.-+++++..+-- -...+.+.--+.+-.-.++|. ....+.|.++|.||||-+|+.+|.+++
T Consensus 36 r~L~e~GyTv~aP~ypGHG~~~e~-fl~t~~~DW~~~v~d~Y~~L~----~~gy~eI~v~GlSmGGv~alkla~~~p--- 107 (243)
T COG1647 36 RYLNENGYTVYAPRYPGHGTLPED-FLKTTPRDWWEDVEDGYRDLK----EAGYDEIAVVGLSMGGVFALKLAYHYP--- 107 (243)
T ss_pred HHHHHCCceEecCCCCCCCCCHHH-HhcCCHHHHHHHHHHHHHHHH----HcCCCeEEEEeecchhHHHHHHHhhCC---
Confidence 578889999999999999986511 122344555566666667775 336789999999999999999999986
Q ss_pred ccccccccCCcc
Q psy15133 86 KLGRITGLDPTI 97 (229)
Q Consensus 86 ~v~rIt~LDPAg 97 (229)
+++|+.|.++-
T Consensus 108 -~K~iv~m~a~~ 118 (243)
T COG1647 108 -PKKIVPMCAPV 118 (243)
T ss_pred -ccceeeecCCc
Confidence 78898887764
No 82
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.14 E-value=0.00047 Score=58.47 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=65.5
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc--cC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE--KG 84 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~--~~ 84 (229)
-|.+.++.||.||=. .|.-.......++.+++++|+... .....+++.|||.|.||=|.=++-.++| ..
T Consensus 24 ~l~~~G~~VvGvdsl------~Yfw~~rtP~~~a~Dl~~~i~~y~---~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r 94 (192)
T PF06057_consen 24 ALAKQGVPVVGVDSL------RYFWSERTPEQTAADLARIIRHYR---ARWGRKRVVLIGYSFGADVLPFIYNRLPAALR 94 (192)
T ss_pred HHHHCCCeEEEechH------HHHhhhCCHHHHHHHHHHHHHHHH---HHhCCceEEEEeecCCchhHHHHHhhCCHHHH
Confidence 367788999999943 233334455678889999998875 2557789999999999999999999998 56
Q ss_pred CccccccccCCcc
Q psy15133 85 RKLGRITGLDPTI 97 (229)
Q Consensus 85 ~~v~rIt~LDPAg 97 (229)
.+|..++.|-|+.
T Consensus 95 ~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 95 ARVAQVVLLSPST 107 (192)
T ss_pred hheeEEEEeccCC
Confidence 8899999999984
No 83
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.12 E-value=0.0013 Score=68.80 Aligned_cols=79 Identities=18% Similarity=0.113 Sum_probs=59.3
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~r 89 (229)
.+++|+.+|.++..... ......+.+++.+.+.+..+. ...+++|+||||||.||..++.++. .+.++..
T Consensus 1093 ~~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~------~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~ 1163 (1296)
T PRK10252 1093 PQWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQ------PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAF 1163 (1296)
T ss_pred CCCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEechhhHHHHHHHHHHHHcCCceeE
Confidence 57999999998876432 223456677777777666552 2347999999999999999999875 3578999
Q ss_pred ccccCCccc
Q psy15133 90 ITGLDPTII 98 (229)
Q Consensus 90 It~LDPAgp 98 (229)
++.+|+..+
T Consensus 1164 l~l~~~~~~ 1172 (1296)
T PRK10252 1164 LGLLDTWPP 1172 (1296)
T ss_pred EEEecCCCc
Confidence 999987544
No 84
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.09 E-value=0.0013 Score=60.35 Aligned_cols=69 Identities=17% Similarity=0.134 Sum_probs=54.3
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+.-+.||++.++++-+.+... .+...+...-...++.|.++..|+.+++|.+-||||||-|++.+-+.-
T Consensus 168 k~~~aNvl~fNYpGVg~S~G~----~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 168 KELGANVLVFNYPGVGSSTGP----PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHcCCcEEEECCCccccCCCC----CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 456789999999999876433 244666666677788887445699999999999999999999876653
No 85
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.08 E-value=0.0016 Score=65.84 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=50.4
Q ss_pred cccCCeEEEEEcCCCCCCCcc----------------h------hhcccChHHHHHHHHHHHHHHh------cC---CCC
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPC----------------I------DQISWSPSFAGACIAQLAYYLS------QH---PRG 56 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~----------------y------~~a~~~~~~vg~~la~~i~~L~------~~---~~~ 56 (229)
|...+|.||++|+++++.+.. | ..++.+.+....++..+...|. .. ...
T Consensus 472 La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~ 551 (792)
T TIGR03502 472 LAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINV 551 (792)
T ss_pred HHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 555679999999998887621 1 1123466776677777767663 00 012
Q ss_pred CCCCceEEEEecHHHHHHHHHHhh
Q psy15133 57 VPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 57 ~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
++..+++++||||||.|+-.+...
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHh
Confidence 556799999999999999877754
No 86
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.05 E-value=0.00064 Score=59.55 Aligned_cols=124 Identities=16% Similarity=0.057 Sum_probs=70.4
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCcccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGR 89 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~r 89 (229)
.+..+++|.|++.+.-..- ....++..+++.|+.-|.- -..-..+-+.||||||.||=.+++++. .+..+..
T Consensus 32 ~~iel~avqlPGR~~r~~e-p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~ 104 (244)
T COG3208 32 ADIELLAVQLPGRGDRFGE-PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRA 104 (244)
T ss_pred chhheeeecCCCcccccCC-cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcce
Confidence 4788999999988754211 1233444455444433331 122346999999999999999999986 1111222
Q ss_pred ccccCCccccccCCCcccCcCCCCCCeEEEEE----cCCC------CCCCcccCCCcceeecCC
Q psy15133 90 ITGLDPTIIFYQTNNKTKDLDSTDALFVDVIH----TAAG------VLGQWGPSGHADYYVNGG 143 (229)
Q Consensus 90 It~LDPAgp~f~~~~~~~rL~~~DA~fVdvIH----T~~~------~~G~~~~~Gh~DfypNgG 143 (229)
+...--..|..... ......+|++|++-|= |+.. ..-+..|+=.+||....+
T Consensus 105 lfisg~~aP~~~~~--~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~ 166 (244)
T COG3208 105 LFISGCRAPHYDRG--KQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALES 166 (244)
T ss_pred EEEecCCCCCCccc--CCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcc
Confidence 22222223322221 2344567787776443 2211 123345777789988876
No 87
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.04 E-value=0.0014 Score=58.02 Aligned_cols=78 Identities=22% Similarity=0.138 Sum_probs=52.9
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGRI 90 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rI 90 (229)
+.-|..++-++..... +-..+...+++....-|..+. +--.++|+|+||||-||-.+|+++. .++.|.++
T Consensus 26 ~~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~Q------P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L 96 (257)
T COG3319 26 LLPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQ------PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFL 96 (257)
T ss_pred CceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhC------CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEE
Confidence 3566777766654221 112233333333333333332 4458999999999999999999987 67899999
Q ss_pred cccCCccc
Q psy15133 91 TGLDPTII 98 (229)
Q Consensus 91 t~LDPAgp 98 (229)
+.||+..+
T Consensus 97 ~llD~~~~ 104 (257)
T COG3319 97 GLLDAVPP 104 (257)
T ss_pred EEeccCCC
Confidence 99999988
No 88
>PRK11460 putative hydrolase; Provisional
Probab=96.98 E-value=0.0017 Score=55.99 Aligned_cols=53 Identities=21% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
+.+.++++.+. ...+++.++++|+|||+||.+|..++...+ +.++.++++-+.
T Consensus 85 ~~l~~~i~~~~-~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~--~~~~~vv~~sg~ 137 (232)
T PRK11460 85 PTFIETVRYWQ-QQSGVGASATALIGFSQGAIMALEAVKAEP--GLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHHHH-HhcCCChhhEEEEEECHHHHHHHHHHHhCC--CcceEEEEeccc
Confidence 44555566654 234778889999999999999999887765 677777777543
No 89
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.92 E-value=0.0015 Score=62.04 Aligned_cols=74 Identities=4% Similarity=-0.123 Sum_probs=46.9
Q ss_pred EEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc--cCCccccccccC
Q psy15133 17 VVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE--KGRKLGRITGLD 94 (229)
Q Consensus 17 ~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~--~~~~v~rIt~LD 94 (229)
..|..+++-+..+. .......+.++++|+.+.+ ..+.++++||||||||.++-.+....+ -.+.|++++.|
T Consensus 125 ~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~---~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~l- 197 (440)
T PLN02733 125 GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYK---ASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAI- 197 (440)
T ss_pred CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHH---HcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEE-
Confidence 55666655432111 1123344677777777642 234578999999999999998776654 12457888888
Q ss_pred Cccc
Q psy15133 95 PTII 98 (229)
Q Consensus 95 PAgp 98 (229)
|+|
T Consensus 198 -a~P 200 (440)
T PLN02733 198 -AAP 200 (440)
T ss_pred -CCC
Confidence 555
No 90
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.87 E-value=0.0018 Score=57.72 Aligned_cols=87 Identities=17% Similarity=0.053 Sum_probs=53.9
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~r 89 (229)
.-++=||+.++........+ .-......|.+.+.+-++.+.-..-..+++++-|+|||-||..|-.++..+.+.-++..
T Consensus 71 SHGfIVVAPQl~~~~~p~~~-~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsa 149 (307)
T PF07224_consen 71 SHGFIVVAPQLYTLFPPDGQ-DEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSA 149 (307)
T ss_pred hcCeEEEechhhcccCCCch-HHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhh
Confidence 35666777777654332111 11122334444444444443211225578999999999999999887765544578999
Q ss_pred ccccCCcc
Q psy15133 90 ITGLDPTI 97 (229)
Q Consensus 90 It~LDPAg 97 (229)
|+||||..
T Consensus 150 LIGiDPV~ 157 (307)
T PF07224_consen 150 LIGIDPVA 157 (307)
T ss_pred eecccccC
Confidence 99999963
No 91
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.81 E-value=0.0022 Score=58.57 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=49.4
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHH-HHHHHHHhhc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGA-HIAGLTANYV 81 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGA-hIAg~~g~~~ 81 (229)
+.++.+.|+++||++.+.+.+...--++.. .-++++.+++.|. ......++..+|+|||| ++|-+.|++-
T Consensus 100 ~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G-~t~D~~~~l~~l~---~~~~~r~~~avG~SLGgnmLa~ylgeeg 170 (345)
T COG0429 100 LSRRGWLVVVFHFRGCSGEANTSPRLYHSG-ETEDIRFFLDWLK---ARFPPRPLYAVGFSLGGNMLANYLGEEG 170 (345)
T ss_pred HHhcCCeEEEEecccccCCcccCcceeccc-chhHHHHHHHHHH---HhCCCCceEEEEecccHHHHHHHHHhhc
Confidence 345669999999999987764221111111 1267788888885 24477899999999999 8888888763
No 92
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.80 E-value=0.0029 Score=61.64 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=52.9
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHH----HHhhcc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGL----TANYVE 82 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~----~g~~~~ 82 (229)
||..+++.|.+|||..-.... .........+.|.+-|+.+.+ .-+.++++++|+||||-++.. ++...+
T Consensus 242 ~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~---~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~ 314 (560)
T TIGR01839 242 YCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRA---ITGSRDLNLLGACAGGLTCAALVGHLQALGQ 314 (560)
T ss_pred HHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHH---hcCCCCeeEEEECcchHHHHHHHHHHHhcCC
Confidence 566789999999998865432 122222222466666666642 336789999999999999985 333332
Q ss_pred cCCccccccccC
Q psy15133 83 KGRKLGRITGLD 94 (229)
Q Consensus 83 ~~~~v~rIt~LD 94 (229)
.++|+.+|.|-
T Consensus 315 -~~~V~sltlla 325 (560)
T TIGR01839 315 -LRKVNSLTYLV 325 (560)
T ss_pred -CCceeeEEeee
Confidence 13799988653
No 93
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.75 E-value=0.0031 Score=58.20 Aligned_cols=109 Identities=16% Similarity=0.214 Sum_probs=73.1
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-c-----C
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-K-----G 84 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~-----~ 84 (229)
-+.-.|++-|+..++...|......+..-...++.+|+.|. ...+.++||||.||||..+...+=+++- . +
T Consensus 145 ~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La---~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~ 221 (377)
T COG4782 145 NDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLA---TDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLP 221 (377)
T ss_pred CCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHH---hCCCCceEEEEEecchHHHHHHHHHHHhccCCcchh
Confidence 34567888999999877777666667777889999999996 2446899999999999999999887765 1 2
Q ss_pred CccccccccCCccc--cccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 85 RKLGRITGLDPTII--FYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 85 ~~v~rIt~LDPAgp--~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
.+|+.++.--|-.= .|.. ....+.+-|..|-...--|.
T Consensus 222 ~ki~nViLAaPDiD~DVF~~--Q~~~mg~~~~~ft~~~s~dD 261 (377)
T COG4782 222 AKIKNVILAAPDIDVDVFSS--QIAAMGKPDPPFTLFVSRDD 261 (377)
T ss_pred hhhhheEeeCCCCChhhHHH--HHHHhcCCCCCeeEEecccc
Confidence 34555554333211 1111 12235556666666555443
No 94
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.75 E-value=0.0008 Score=52.53 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=36.1
Q ss_pred CCceEEEEecHHHHHHHHHHhhcccCCc--cccccccCCccccccCCCcccCcCCCCC-CeEEEEEcC
Q psy15133 59 PEKLHLLGWSIGAHIAGLTANYVEKGRK--LGRITGLDPTIIFYQTNNKTKDLDSTDA-LFVDVIHTA 123 (229)
Q Consensus 59 ~~~ihlIGhSLGAhIAg~~g~~~~~~~~--v~rIt~LDPAgp~f~~~~~~~rL~~~DA-~fVdvIHT~ 123 (229)
..++.+.||||||-+|..++..+..... -.++..+--+.|-..+......++..-. .+..++|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~~~~~~~~iv~~~ 130 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSLFNRNIFRIVNQN 130 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHHTSCGEEEEEETT
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhhCCCeEEEEEECC
Confidence 4799999999999999999988761111 1333334334444433222223332222 466666655
No 95
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.73 E-value=0.0022 Score=55.66 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=32.1
Q ss_pred CceEEEEecHHHHHHHHHHhhcc--cCCccccccccCCcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE--KGRKLGRITGLDPTI 97 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~--~~~~v~rIt~LDPAg 97 (229)
.++.|.||||||.+|-+++.... ...||.++...|..|
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 36999999999999999998865 236889999999865
No 96
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.66 E-value=0.0025 Score=59.92 Aligned_cols=89 Identities=18% Similarity=0.188 Sum_probs=58.1
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
.||...++++++||-++.+.++.++. ..+...+- ..+|++|.+ ..-++.++|.++|.|+||++|-.+|..-+ .
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~~l-~~D~~~l~---~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~AvRlA~le~--~ 284 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKWPL-TQDSSRLH---QAVLDYLAS-RPWVDHTRVGAWGFSFGGYYAVRLAALED--P 284 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHH---HHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHTT--T
T ss_pred HHHHhCCCEEEEEccCCCcccccCCC-CcCHHHHH---HHHHHHHhc-CCccChhheEEEEeccchHHHHHHHHhcc--c
Confidence 35667899999999999997754432 22333333 445666652 33678889999999999999999987644 7
Q ss_pred ccccccccCCc-ccccc
Q psy15133 86 KLGRITGLDPT-IIFYQ 101 (229)
Q Consensus 86 ~v~rIt~LDPA-gp~f~ 101 (229)
||+.++.+.|. --+|.
T Consensus 285 RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 285 RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp T-SEEEEES---SCGGH
T ss_pred ceeeEeeeCchHhhhhc
Confidence 99999998886 33443
No 97
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.62 E-value=0.0039 Score=55.27 Aligned_cols=80 Identities=23% Similarity=0.141 Sum_probs=52.3
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcC--CC-----CCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQH--PR-----GVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~--~~-----~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.-+|=||.+|+...... +...-.+.+++++++|.+. .. ..+++++.|.|||-||.+|-.++....
T Consensus 42 ShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 42 SHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred hCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 35788999996553321 1112234445555554321 11 247889999999999999987776652
Q ss_pred ---cCCccccccccCCcc
Q psy15133 83 ---KGRKLGRITGLDPTI 97 (229)
Q Consensus 83 ---~~~~v~rIt~LDPAg 97 (229)
...++..+++|||.-
T Consensus 114 ~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 114 SSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccceeEEEEecccc
Confidence 125899999999975
No 98
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.56 E-value=0.0018 Score=56.02 Aligned_cols=70 Identities=21% Similarity=0.236 Sum_probs=41.7
Q ss_pred ccccCCeE---EEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 7 YFHKGDYN---VIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 7 ~l~~~d~n---VI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+|+..+|. |.+++|................+.+ +.|++||+...+ .-.. +|.|||||||+-||=++-+..
T Consensus 24 ~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~-~~l~~fI~~Vl~---~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 24 YLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESA-KQLRAFIDAVLA---YTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHH-HHHHHHHHHHHH---HHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHcCCCcceeEeccCCCCCCCCcccccccchhhH-HHHHHHHHHHHH---hhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 56667788 8999997766533222222233443 788899888652 1244 999999999999888776653
No 99
>KOG1552|consensus
Probab=96.53 E-value=0.0041 Score=54.94 Aligned_cols=77 Identities=23% Similarity=0.170 Sum_probs=54.6
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccc
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~r 89 (229)
+-++||+..|+++.+.+..-+ +..|+ -+++....+.|. +..| +.++|.|.|+|+|+..+-.+|.+.+ +..
T Consensus 86 ~ln~nv~~~DYSGyG~S~G~p-sE~n~---y~Di~avye~Lr-~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~----~~a 155 (258)
T KOG1552|consen 86 FLNCNVVSYDYSGYGRSSGKP-SERNL---YADIKAVYEWLR-NRYG-SPERIILYGQSIGTVPTVDLASRYP----LAA 155 (258)
T ss_pred cccceEEEEecccccccCCCc-ccccc---hhhHHHHHHHHH-hhcC-CCceEEEEEecCCchhhhhHhhcCC----cce
Confidence 358999999999998875332 22233 345555667775 3446 8999999999999999888777742 666
Q ss_pred ccccCCc
Q psy15133 90 ITGLDPT 96 (229)
Q Consensus 90 It~LDPA 96 (229)
++..-|-
T Consensus 156 lVL~SPf 162 (258)
T KOG1552|consen 156 VVLHSPF 162 (258)
T ss_pred EEEeccc
Confidence 6665553
No 100
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.41 E-value=0.0066 Score=51.82 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=22.7
Q ss_pred CCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 57 VPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 57 ~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.+..++.+.||||||-+|..++..+.
T Consensus 125 ~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 125 YPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCCceEEEEccCHHHHHHHHHHHHHH
Confidence 35678999999999999999998875
No 101
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=96.38 E-value=0.0062 Score=54.27 Aligned_cols=70 Identities=21% Similarity=0.108 Sum_probs=46.5
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
++...++-|++||++-.-.. .|+.+. ..+-+.+..+.+... ..+.++++|-|.|+|-|||+|..++....
T Consensus 105 ~~~~~g~~vv~vdYrlaPe~-~~p~~~---~d~~~a~~~l~~~~~--~~g~dp~~i~v~GdSAGG~La~~~a~~~~ 174 (312)
T COG0657 105 LAAAAGAVVVSVDYRLAPEH-PFPAAL---EDAYAAYRWLRANAA--ELGIDPSRIAVAGDSAGGHLALALALAAR 174 (312)
T ss_pred HHHHcCCEEEecCCCCCCCC-CCCchH---HHHHHHHHHHHhhhH--hhCCCccceEEEecCcccHHHHHHHHHHH
Confidence 34567899999999865443 254433 222222222222221 23789999999999999999999998875
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=96.27 E-value=0.0082 Score=50.65 Aligned_cols=38 Identities=29% Similarity=0.418 Sum_probs=30.6
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f 100 (229)
..+++.|||.||||..|..++.+++ ++. +.+.||-..+
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~----~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYG----LPA-VLINPAVRPY 94 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhC----CCE-EEEcCCCCHH
Confidence 4556999999999999999998875 444 8889986443
No 103
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.15 E-value=0.012 Score=55.38 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=51.3
Q ss_pred ccccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-c
Q psy15133 5 IAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-K 83 (229)
Q Consensus 5 ~a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~ 83 (229)
+++|. ++.|.++||......+ ......+.....+.|.++|+.+ +.+ +||+|.++||-.+..+...+. .
T Consensus 124 ~~Ll~--g~dVYl~DW~~p~~vp-~~~~~f~ldDYi~~l~~~i~~~-------G~~-v~l~GvCqgG~~~laa~Al~a~~ 192 (406)
T TIGR01849 124 EALLP--DHDVYITDWVNARMVP-LSAGKFDLEDYIDYLIEFIRFL-------GPD-IHVIAVCQPAVPVLAAVALMAEN 192 (406)
T ss_pred HHHhC--CCcEEEEeCCCCCCCc-hhcCCCCHHHHHHHHHHHHHHh-------CCC-CcEEEEchhhHHHHHHHHHHHhc
Confidence 34444 8999999998776443 2223333333335666666544 555 999999999999887777664 1
Q ss_pred --CCcccccccc
Q psy15133 84 --GRKLGRITGL 93 (229)
Q Consensus 84 --~~~v~rIt~L 93 (229)
+.+++.+|.+
T Consensus 193 ~~p~~~~sltlm 204 (406)
T TIGR01849 193 EPPAQPRSMTLM 204 (406)
T ss_pred CCCCCcceEEEE
Confidence 2468888864
No 104
>KOG4627|consensus
Probab=96.09 E-value=0.014 Score=50.58 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=44.5
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccc
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLG 88 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~ 88 (229)
.+.+|.|..||+.--- -.......-.+....++++.+ .--..+++.+-|||-|||+|..+-.+.. ..+|.
T Consensus 94 ~~~gY~vasvgY~l~~-------q~htL~qt~~~~~~gv~filk--~~~n~k~l~~gGHSaGAHLa~qav~R~r-~prI~ 163 (270)
T KOG4627|consen 94 VRRGYRVASVGYNLCP-------QVHTLEQTMTQFTHGVNFILK--YTENTKVLTFGGHSAGAHLAAQAVMRQR-SPRIW 163 (270)
T ss_pred hhcCeEEEEeccCcCc-------ccccHHHHHHHHHHHHHHHHH--hcccceeEEEcccchHHHHHHHHHHHhc-CchHH
Confidence 4578999999885211 111222333444555666542 2335567999999999999988776643 23444
Q ss_pred cccc
Q psy15133 89 RITG 92 (229)
Q Consensus 89 rIt~ 92 (229)
.+..
T Consensus 164 gl~l 167 (270)
T KOG4627|consen 164 GLIL 167 (270)
T ss_pred HHHH
Confidence 4433
No 105
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=96.08 E-value=0.016 Score=48.77 Aligned_cols=84 Identities=19% Similarity=0.194 Sum_probs=52.5
Q ss_pred cccCCeEEEEEcCCCCCC-Cc-chhhcccC--------hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHH
Q psy15133 8 FHKGDYNVIVVDYGSLVV-VP-CIDQISWS--------PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLT 77 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~-~~-~y~~a~~~--------~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~ 77 (229)
|...+|.|+++|+-.... .+ .+...... ...+.+.+...++.|.+ ...++.++|-+||+|+||.+|-.+
T Consensus 37 lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~-~~~~~~~kig~vGfc~GG~~a~~~ 115 (218)
T PF01738_consen 37 LAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA-QPEVDPGKIGVVGFCWGGKLALLL 115 (218)
T ss_dssp HHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC-TTTCEEEEEEEEEETHHHHHHHHH
T ss_pred HHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-ccccCCCcEEEEEEecchHHhhhh
Confidence 445679999999854443 11 11111111 23455666677888872 234678999999999999999998
Q ss_pred HhhcccCCccccccccCC
Q psy15133 78 ANYVEKGRKLGRITGLDP 95 (229)
Q Consensus 78 g~~~~~~~~v~rIt~LDP 95 (229)
+... .++...+..=|
T Consensus 116 a~~~---~~~~a~v~~yg 130 (218)
T PF01738_consen 116 AARD---PRVDAAVSFYG 130 (218)
T ss_dssp HCCT---TTSSEEEEES-
T ss_pred hhhc---cccceEEEEcC
Confidence 8764 35666666555
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=96.03 E-value=0.01 Score=50.91 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f 100 (229)
+.++++|..+. .+.+++.+++.++|||=||.||..++...+ ..+.+++++-|.-|.-
T Consensus 81 ~~~~~~l~~~~-~~~gi~~~~ii~~GfSqGA~ial~~~l~~~--~~~~~ail~~g~~~~~ 137 (207)
T COG0400 81 EKLAEFLEELA-EEYGIDSSRIILIGFSQGANIALSLGLTLP--GLFAGAILFSGMLPLE 137 (207)
T ss_pred HHHHHHHHHHH-HHhCCChhheEEEecChHHHHHHHHHHhCc--hhhccchhcCCcCCCC
Confidence 44455555554 345899999999999999999999999987 8999999999988764
No 107
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.02 E-value=0.019 Score=54.78 Aligned_cols=72 Identities=18% Similarity=0.117 Sum_probs=48.8
Q ss_pred CCeEEEEEcCC-CCCCCcch-hhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 11 GDYNVIVVDYG-SLVVVPCI-DQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 11 ~d~nVI~vDw~-~~a~~~~y-~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
...|||.+|.+ +.+.+... .....+...+++++.++|+.+.+.-..+...+++|+|||+|||++-.++.++.
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 45899999986 33332110 11233456788888888887642222455689999999999999988887763
No 108
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.94 E-value=0.0057 Score=53.70 Aligned_cols=73 Identities=19% Similarity=0.214 Sum_probs=46.5
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhc--ccChHHH-HHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQI--SWSPSFA-GACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a--~~~~~~v-g~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+++.+..+.|++.|+++.+.+..-... .....+. -.++..-|..|. +.++--....||||+|||+.|.++..-
T Consensus 51 ~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~---~~~~~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 51 AAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALK---KALPGHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred HHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHH---hhCCCCceEEeeccccceeecccccCc
Confidence 345678999999999998876321111 0111111 133444455554 123445789999999999999999763
No 109
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=95.90 E-value=0.02 Score=48.84 Aligned_cols=58 Identities=22% Similarity=0.422 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccccC
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQT 102 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f~~ 102 (229)
++..+-+++|.+ ...++.++|-|+|.|.||-+|..+|.+++ +|..++++.|....|..
T Consensus 4 Eyfe~Ai~~L~~-~p~v~~~~Igi~G~SkGaelALllAs~~~---~i~avVa~~ps~~~~~~ 61 (213)
T PF08840_consen 4 EYFEEAIDWLKS-HPEVDPDKIGIIGISKGAELALLLASRFP---QISAVVAISPSSVVFQG 61 (213)
T ss_dssp HHHHHHHHHHHC-STTB--SSEEEEEETHHHHHHHHHHHHSS---SEEEEEEES--SB--SS
T ss_pred HHHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHHHHhcCC---CccEEEEeCCceeEecc
Confidence 345566788873 34778899999999999999999999985 89999999999888764
No 110
>KOG3724|consensus
Probab=95.54 E-value=0.028 Score=56.64 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=50.0
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCC---CCCceEEEEecHHHHHHHHHHhhcc-cCC
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGV---PPEKLHLLGWSIGAHIAGLTANYVE-KGR 85 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~---~~~~ihlIGhSLGAhIAg~~g~~~~-~~~ 85 (229)
...+...+||..+.-.-.+=......+++|-+.|-..+.... .+... .+.+|.||||||||-||-.+.-.-. ..+
T Consensus 130 ~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr-~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~ 208 (973)
T KOG3724|consen 130 PFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYR-GEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQG 208 (973)
T ss_pred ccccceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhh-cccccCCCCCceEEEEeccchhHHHHHHHhhhhhccc
Confidence 456788899987643221111112235566666665555443 22223 3788999999999999977663321 246
Q ss_pred ccccccccC
Q psy15133 86 KLGRITGLD 94 (229)
Q Consensus 86 ~v~rIt~LD 94 (229)
-|..|+-|-
T Consensus 209 sVntIITls 217 (973)
T KOG3724|consen 209 SVNTIITLS 217 (973)
T ss_pred hhhhhhhhc
Confidence 677777653
No 111
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.50 E-value=0.028 Score=52.39 Aligned_cols=72 Identities=13% Similarity=0.117 Sum_probs=47.7
Q ss_pred CeEEEE--EcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhccc----CC
Q psy15133 12 DYNVIV--VDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEK----GR 85 (229)
Q Consensus 12 d~nVI~--vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~----~~ 85 (229)
+.++.+ -||+..-. ........|.++|+.+. ...-+++.||||||||.++-.+=+..+. .+
T Consensus 82 ~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~----~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~ 148 (389)
T PF02450_consen 82 GKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAY----KKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDK 148 (389)
T ss_pred CCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHH----HhcCCcEEEEEeCCCchHHHHHHHhccchhhHHh
Confidence 344444 48874432 11234466777777765 2235799999999999999887766641 24
Q ss_pred ccccccccCCc
Q psy15133 86 KLGRITGLDPT 96 (229)
Q Consensus 86 ~v~rIt~LDPA 96 (229)
.|.+++.|-|.
T Consensus 149 ~i~~~i~i~~p 159 (389)
T PF02450_consen 149 YIKRFISIGTP 159 (389)
T ss_pred hhhEEEEeCCC
Confidence 68998888654
No 112
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.38 E-value=0.027 Score=48.04 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=37.6
Q ss_pred HHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 45 QLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 45 ~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
+++-.+.+ ...+..++.-|+|+||||..|..++.+.| +..+.+.++.|+
T Consensus 101 el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~P--d~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHP--DLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHST--TTESEEEEESEE
T ss_pred cchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCc--cccccccccCcc
Confidence 44444432 22444444899999999999999999987 899999999987
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=95.37 E-value=0.03 Score=49.54 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc--c-CCccccccccCCcccc
Q psy15133 35 SPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE--K-GRKLGRITGLDPTIIF 99 (229)
Q Consensus 35 ~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~--~-~~~v~rIt~LDPAgp~ 99 (229)
+...-++.+...|..|.+ ....+++-+|||||||-++-.+..... . -.+|.+++.| |+|+
T Consensus 81 ~~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~I--a~pf 143 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTI--AGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEE--S--T
T ss_pred CHHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEe--cccc
Confidence 345678899999999973 567899999999999999987665543 1 1267777777 4454
No 114
>PLN02408 phospholipase A1
Probab=95.32 E-value=0.028 Score=52.27 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=38.4
Q ss_pred CceEEEEecHHHHHHHHHHhhcc-cCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE-KGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
-+|++.||||||.+|-.+|-.+. .......++..-=++|-..+....+.++....++.-|+|.+.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~~~~lRVvN~~D 265 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQGTKVLRIVNSDD 265 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEEeCCC
Confidence 36999999999999999998876 111111233333334444333333444444456667777664
No 115
>KOG4391|consensus
Probab=95.12 E-value=0.0054 Score=53.50 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=54.8
Q ss_pred cccccccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 2 SRPIAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 2 ~~~~a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
++-+-+..+-+.||++|++++.+.+..-+... ....-+ -..|+.|. ..-..+-.++.|.|-||||.||-.++...
T Consensus 96 ~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~-GL~lDs---~avldyl~-t~~~~dktkivlfGrSlGGAvai~lask~ 170 (300)
T KOG4391|consen 96 PIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE-GLKLDS---EAVLDYLM-TRPDLDKTKIVLFGRSLGGAVAIHLASKN 170 (300)
T ss_pred hHHHHHHHHcCceEEEEEeeccccCCCCcccc-ceeccH---HHHHHHHh-cCccCCcceEEEEecccCCeeEEEeeccc
Confidence 34455666778999999999999875332211 111112 22366665 23477888999999999999998888765
Q ss_pred ccCCcccccc
Q psy15133 82 EKGRKLGRIT 91 (229)
Q Consensus 82 ~~~~~v~rIt 91 (229)
. .++..|+
T Consensus 171 ~--~ri~~~i 178 (300)
T KOG4391|consen 171 S--DRISAII 178 (300)
T ss_pred h--hheeeee
Confidence 4 5544443
No 116
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.08 E-value=0.032 Score=47.68 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 35 SPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 35 ~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.++..|+.+++-|....+ .......+|.+|||||||-|+=+|-....
T Consensus 54 gI~~~g~rL~~eI~~~~~-~~~~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIK-DYESKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred hhHHHHHHHHHHHHHhcc-ccccccccceEEEecccHHHHHHHHHHhh
Confidence 456677777665555431 12223468999999999999987766554
No 117
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.95 E-value=0.011 Score=54.58 Aligned_cols=126 Identities=16% Similarity=0.141 Sum_probs=74.6
Q ss_pred hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc---cCCccccccccCCccccccCCCccc
Q psy15133 31 QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE---KGRKLGRITGLDPTIIFYQTNNKTK 107 (229)
Q Consensus 31 ~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~---~~~~v~rIt~LDPAgp~f~~~~~~~ 107 (229)
.+....+.+|..||+.|..- ...--+++||||||||-|.-..-+.+. ..+.|..++.+-. |.-.+...-.
T Consensus 196 ~a~~rA~~aG~~LA~~L~~~-----~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga--pv~~~~~~W~ 268 (345)
T PF05277_consen 196 VAKDRAEKAGKVLADALLSR-----NQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA--PVPSDPEEWR 268 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----cCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC--CCCCCHHHHH
Confidence 34445567888888776543 225557999999999999988887776 1233677777642 2221111111
Q ss_pred CcCC-CCCCeEEEEEcCCCCCCCcccCCCcceeecC-C-cCC---CCCCCCCccccccccccc
Q psy15133 108 DLDS-TDALFVDVIHTAAGVLGQWGPSGHADYYVNG-G-TSQ---PGCGSFSIIEQLSCDHTK 164 (229)
Q Consensus 108 rL~~-~DA~fVdvIHT~~~~~G~~~~~Gh~DfypNg-G-~~Q---PgC~~~~~~~~~~CsH~r 164 (229)
.+.. -.-.+|.+.-.|...|++..+.-...+-+.| + ... |++.+.+.. ....+|..
T Consensus 269 ~~r~vVsGr~vN~YS~~D~vL~~lyr~~~~~~~vaGl~~v~~~~~~~veNvdvs-~lV~gH~~ 330 (345)
T PF05277_consen 269 KIRSVVSGRLVNVYSENDWVLGFLYRASSLGLSVAGLQPVESMGVPGVENVDVS-DLVSGHLD 330 (345)
T ss_pred HHHHHccCeEEEEecCcHHHHHHHHHhcccCcccceecceeccccCCceeeeCc-cccCCHHH
Confidence 2222 3356777776666677877665555555666 3 233 666554322 23456764
No 118
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=94.65 E-value=0.091 Score=48.75 Aligned_cols=81 Identities=14% Similarity=-0.037 Sum_probs=53.6
Q ss_pred ccccCCeEEEEEcCCCCC--CCcc---------hhh--cccChHHHHHHHHHHHHHHhcCCCCCCCCceE-EEEecHHHH
Q psy15133 7 YFHKGDYNVIVVDYGSLV--VVPC---------IDQ--ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLH-LLGWSIGAH 72 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a--~~~~---------y~~--a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ih-lIGhSLGAh 72 (229)
-+....|-||++|--+.. ++.. |-. ....+++..+.-..+++ .+++++++ +||-||||.
T Consensus 87 ~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~-------~LGI~~l~avvGgSmGGM 159 (368)
T COG2021 87 PIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLD-------ALGIKKLAAVVGGSMGGM 159 (368)
T ss_pred CCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHH-------hcCcceEeeeeccChHHH
Confidence 366788999999975443 2210 100 11223333222233334 44788997 999999999
Q ss_pred HHHHHHhhcccCCccccccccCCc
Q psy15133 73 IAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 73 IAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
.|..-+..+| ++|.+++.|--+
T Consensus 160 qaleWa~~yP--d~V~~~i~ia~~ 181 (368)
T COG2021 160 QALEWAIRYP--DRVRRAIPIATA 181 (368)
T ss_pred HHHHHHHhCh--HHHhhhheeccc
Confidence 9999999987 999999988664
No 119
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.58 E-value=0.1 Score=45.23 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
..|+.+|+.+. ....+++++|++.|+|.||.++-.++..+| +.+..+-
T Consensus 79 ~~i~~lv~~v~-~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p--d~faa~a 126 (220)
T PF10503_consen 79 AFIAALVDYVA-ARYNIDPSRVYVTGLSNGGMMANVLACAYP--DLFAAVA 126 (220)
T ss_pred hhHHHHHHhHh-hhcccCCCceeeEEECHHHHHHHHHHHhCC--ccceEEE
Confidence 46788888886 345999999999999999999999998887 6655433
No 120
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.58 E-value=0.092 Score=44.04 Aligned_cols=84 Identities=15% Similarity=0.112 Sum_probs=56.7
Q ss_pred eEEEEEcCCCCCCC-cchhhcc--cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcccc
Q psy15133 13 YNVIVVDYGSLVVV-PCIDQIS--WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 13 ~nVI~vDw~~~a~~-~~y~~a~--~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~r 89 (229)
-.|-+|-|-+.-.- .....+. ...+.-+..|..|++-|.. ..-+...+++||||.|.-++|.+.+... ..+..
T Consensus 61 ~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~~gl~a--~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vdd 136 (177)
T PF06259_consen 61 GSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFLDGLRA--THGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDD 136 (177)
T ss_pred CCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHHHHhhh--hcCCCCCEEEEEecchhHHHHHHhhhCC--CCccc
Confidence 36777777543221 1111111 1245678889999999962 2345679999999999999999998843 67888
Q ss_pred ccccCCccccc
Q psy15133 90 ITGLDPTIIFY 100 (229)
Q Consensus 90 It~LDPAgp~f 100 (229)
|+.+-..|...
T Consensus 137 vv~~GSPG~g~ 147 (177)
T PF06259_consen 137 VVLVGSPGMGV 147 (177)
T ss_pred EEEECCCCCCC
Confidence 88877665543
No 121
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.56 E-value=0.044 Score=50.16 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcccc
Q psy15133 38 FAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIF 99 (229)
Q Consensus 38 ~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~ 99 (229)
..++++...|..... ....+++.||||||||-++-++...++.+.+|.++|.|-+.-..
T Consensus 108 ~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 108 VRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 345666666655431 23458999999999999999988887644789999988776443
No 122
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.54 E-value=0.053 Score=51.21 Aligned_cols=79 Identities=9% Similarity=0.209 Sum_probs=53.7
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChH-HHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPS-FAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR 85 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~-~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~ 85 (229)
||.+.+..|.+|||..-... .+..+.. ++-+.+.+-|+... .-...++|++||++.||-++..+..+++ .+
T Consensus 134 ~l~~~g~~vfvIsw~nPd~~----~~~~~~edYi~e~l~~aid~v~---~itg~~~InliGyCvGGtl~~~ala~~~-~k 205 (445)
T COG3243 134 WLLEQGLDVFVISWRNPDAS----LAAKNLEDYILEGLSEAIDTVK---DITGQKDINLIGYCVGGTLLAAALALMA-AK 205 (445)
T ss_pred HHHHcCCceEEEeccCchHh----hhhccHHHHHHHHHHHHHHHHH---HHhCccccceeeEecchHHHHHHHHhhh-hc
Confidence 56678899999999765433 3333433 23244444444443 1235689999999999999998888887 23
Q ss_pred cccccccc
Q psy15133 86 KLGRITGL 93 (229)
Q Consensus 86 ~v~rIt~L 93 (229)
+|+.+|.|
T Consensus 206 ~I~S~T~l 213 (445)
T COG3243 206 RIKSLTLL 213 (445)
T ss_pred ccccceee
Confidence 48888876
No 123
>PLN02454 triacylglycerol lipase
Probab=94.39 E-value=0.073 Score=50.22 Aligned_cols=41 Identities=27% Similarity=0.223 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCC--ceEEEEecHHHHHHHHHHhhcc
Q psy15133 39 AGACIAQLAYYLSQHPRGVPPE--KLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 39 vg~~la~~i~~L~~~~~~~~~~--~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+-++|-..|+.|.+ ..+-+ +|++.||||||.+|-.+|-.+.
T Consensus 208 ~r~qvl~~V~~l~~---~Yp~~~~sI~vTGHSLGGALAtLaA~di~ 250 (414)
T PLN02454 208 ARSQLLAKIKELLE---RYKDEKLSIVLTGHSLGASLATLAAFDIV 250 (414)
T ss_pred HHHHHHHHHHHHHH---hCCCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 44455555566652 12223 4999999999999999997664
No 124
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.37 E-value=0.068 Score=44.58 Aligned_cols=64 Identities=20% Similarity=0.176 Sum_probs=35.0
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhh
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
....|..|+|+.......|..++ ..=...+.++|+... ..-+-.++.|+|+|.||+|++.+...
T Consensus 38 ~~~~~~~V~YpA~~~~~~y~~S~---~~G~~~~~~~i~~~~---~~CP~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPNSYGDSV---AAGVANLVRLIEEYA---ARCPNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp CEEEEEE--S---SCGGSCHHHH---HHHHHHHHHHHHHHH---HHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred CeeEEEecCCCCCCCcccccccH---HHHHHHHHHHHHHHH---HhCCCCCEEEEecccccHHHHHHHHh
Confidence 45677778887655432343222 111223333333332 12345699999999999999999877
No 125
>PLN02802 triacylglycerol lipase
Probab=94.08 E-value=0.071 Score=51.42 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=38.1
Q ss_pred ceEEEEecHHHHHHHHHHhhcc-cCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 61 KLHLLGWSIGAHIAGLTANYVE-KGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 61 ~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
+|++.||||||.+|-.+|-.+. .......|+..-=++|-..+....++++....++.-|+|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~~~~~~~~RVVN~~D 395 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLNARGVKVLRVVNAQD 395 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEecCCC
Confidence 7999999999999999998775 111111233333334433332223344444556777777654
No 126
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=93.97 E-value=0.16 Score=44.41 Aligned_cols=84 Identities=14% Similarity=0.003 Sum_probs=57.9
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
+...+|.||++|-++.+.|.-..... .+.-+++..+.|++|.+ ...+-.+|=++|.|-+|.++..++..-+ ..|
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~~--Qpws~G~VGm~G~SY~G~~q~~~A~~~~--p~L 126 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIAA--QPWSNGKVGMYGISYGGFTQWAAAARRP--PHL 126 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHHH--CTTEEEEEEEEEETHHHHHHHHHHTTT---TTE
T ss_pred HHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHHh--CCCCCCeEEeeccCHHHHHHHHHHhcCC--CCc
Confidence 56779999999999988775322111 34456888999999973 3555568999999999999999998654 566
Q ss_pred ccccccCCcc
Q psy15133 88 GRITGLDPTI 97 (229)
Q Consensus 88 ~rIt~LDPAg 97 (229)
+.|+...+..
T Consensus 127 kAi~p~~~~~ 136 (272)
T PF02129_consen 127 KAIVPQSGWS 136 (272)
T ss_dssp EEEEEESE-S
T ss_pred eEEEecccCC
Confidence 6666555443
No 127
>PRK04940 hypothetical protein; Provisional
Probab=93.95 E-value=0.15 Score=43.01 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=28.0
Q ss_pred CceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
+++.|||+||||.-|-.++.++. + +-+.++||-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----C-CEEEECCCC
Confidence 57999999999999999998875 3 677888884
No 128
>KOG1515|consensus
Probab=93.94 E-value=0.17 Score=46.51 Aligned_cols=91 Identities=19% Similarity=0.125 Sum_probs=60.9
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHH-HhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc----c
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYY-LSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE----K 83 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~-L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~----~ 83 (229)
..-+..|+.||++-.-..+ ++.+- ++.-..+--+.+. +. ..+++++++-|.|-|-||.||-.++.++. .
T Consensus 120 ~~~~~vvvSVdYRLAPEh~-~Pa~y---~D~~~Al~w~~~~~~~--~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~ 193 (336)
T KOG1515|consen 120 AELNCVVVSVDYRLAPEHP-FPAAY---DDGWAALKWVLKNSWL--KLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLS 193 (336)
T ss_pred HHcCeEEEecCcccCCCCC-CCccc---hHHHHHHHHHHHhHHH--HhCCCcccEEEEccCccHHHHHHHHHHHhhccCC
Confidence 3567899999998665543 54332 2333344444443 32 35999999999999999999999998765 1
Q ss_pred CCccccccccCCccccccCCCc
Q psy15133 84 GRKLGRITGLDPTIIFYQTNNK 105 (229)
Q Consensus 84 ~~~v~rIt~LDPAgp~f~~~~~ 105 (229)
.-+|..++.+=|.--..+...+
T Consensus 194 ~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 194 KPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred CcceEEEEEEecccCCCCCCCH
Confidence 3567777777766544444333
No 129
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=93.90 E-value=0.2 Score=47.13 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=35.7
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
..+.++..|+|+||||-.|.+++.+.+ ++.+++.++.|+-
T Consensus 284 ~~d~~~~~IaG~S~GGl~AL~~al~~P--d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 284 SDDADRTVVAGQSFGGLAALYAGLHWP--ERFGCVLSQSGSF 323 (411)
T ss_pred CCCccceEEEEEChHHHHHHHHHHhCc--ccccEEEEeccce
Confidence 346788999999999999999999987 9999999999874
No 130
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.90 E-value=0.18 Score=43.85 Aligned_cols=88 Identities=20% Similarity=0.250 Sum_probs=55.6
Q ss_pred ccccCCeEEEEEcCCC-CCCCcchh------hc----ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHH
Q psy15133 7 YFHKGDYNVIVVDYGS-LVVVPCID------QI----SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAG 75 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~-~a~~~~y~------~a----~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg 75 (229)
.|..++|-|+++|.=. .+...... .. ......+-..+...+++|.+ ......++|-++|+|+||++|.
T Consensus 49 rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~-~~~~~~~~ig~~GfC~GG~~a~ 127 (236)
T COG0412 49 RLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLAR-QPQVDPKRIGVVGFCMGGGLAL 127 (236)
T ss_pred HHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh-CCCCCCceEEEEEEcccHHHHH
Confidence 3667899999999632 22211111 10 01124556677777888862 2237789999999999999999
Q ss_pred HHHhhcccCCccccccccCCccc
Q psy15133 76 LTANYVEKGRKLGRITGLDPTII 98 (229)
Q Consensus 76 ~~g~~~~~~~~v~rIt~LDPAgp 98 (229)
.++...+ +|...+..-|..+
T Consensus 128 ~~a~~~~---~v~a~v~fyg~~~ 147 (236)
T COG0412 128 LAATRAP---EVKAAVAFYGGLI 147 (236)
T ss_pred HhhcccC---CccEEEEecCCCC
Confidence 9997742 4555555444433
No 131
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=93.74 E-value=0.09 Score=43.55 Aligned_cols=53 Identities=15% Similarity=0.051 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHH-hhcccCCccccccccCCccc
Q psy15133 39 AGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTA-NYVEKGRKLGRITGLDPTII 98 (229)
Q Consensus 39 vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g-~~~~~~~~v~rIt~LDPAgp 98 (229)
+.+.+..+-+.|. . ..+++.|||||||...+..+. .... .+|+.+.++-|.-+
T Consensus 39 ~~~W~~~l~~~i~----~-~~~~~ilVaHSLGc~~~l~~l~~~~~--~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 39 LDEWVQALDQAID----A-IDEPTILVAHSLGCLTALRWLAEQSQ--KKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHCCH----C--TTTEEEEEETHHHHHHHHHHHHTCC--SSEEEEEEES--SC
T ss_pred HHHHHHHHHHHHh----h-cCCCeEEEEeCHHHHHHHHHHhhccc--ccccEEEEEcCCCc
Confidence 3345555544442 2 345699999999999998877 5544 88999998877755
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=93.73 E-value=0.034 Score=51.81 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=28.5
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
.+++++|.++|||+||..|..+++.- .++..-+.|||..
T Consensus 224 rlD~~~i~~~GHSFGGATa~~~l~~d---~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 224 RLDLSRIGLAGHSFGGATALQALRQD---TRFKAGILLDPWM 262 (379)
T ss_dssp -EEEEEEEEEEETHHHHHHHHHHHH----TT--EEEEES---
T ss_pred hcchhheeeeecCchHHHHHHHHhhc---cCcceEEEeCCcc
Confidence 34578999999999999999888764 5789999999985
No 133
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=93.35 E-value=0.15 Score=47.73 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=47.4
Q ss_pred ccccCCeEEEEEcCCCCCCCc---------ch--hhcccCh--------HHHHHHHHHHHHHHhcCCCCCCCCceEEEEe
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVP---------CI--DQISWSP--------SFAGACIAQLAYYLSQHPRGVPPEKLHLLGW 67 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~---------~y--~~a~~~~--------~~vg~~la~~i~~L~~~~~~~~~~~ihlIGh 67 (229)
+|.+.+|=||++|-.+.+.-. +| .....+. .......-..+++|. ....++.++|-++||
T Consensus 155 ~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~-slpeVD~~RIG~~Gf 233 (390)
T PF12715_consen 155 QLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLA-SLPEVDPDRIGCMGF 233 (390)
T ss_dssp HHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHC-T-TTEEEEEEEEEEE
T ss_pred HHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHh-cCcccCccceEEEee
Confidence 467889999999976655321 11 1111111 112233344667775 334889999999999
Q ss_pred cHHHHHHHHHHhhcccCCcccc
Q psy15133 68 SIGAHIAGLTANYVEKGRKLGR 89 (229)
Q Consensus 68 SLGAhIAg~~g~~~~~~~~v~r 89 (229)
||||..+..+|..- +||.-
T Consensus 234 SmGg~~a~~LaALD---dRIka 252 (390)
T PF12715_consen 234 SMGGYRAWWLAALD---DRIKA 252 (390)
T ss_dssp GGGHHHHHHHHHH----TT--E
T ss_pred cccHHHHHHHHHcc---hhhHh
Confidence 99999999999763 56643
No 134
>PLN02310 triacylglycerol lipase
Probab=93.33 E-value=0.13 Score=48.57 Aligned_cols=63 Identities=14% Similarity=0.080 Sum_probs=35.0
Q ss_pred CceEEEEecHHHHHHHHHHhhcccCCccc--cccccCCccccccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVEKGRKLG--RITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~~~~~v~--rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
-+|+|.||||||.+|-.+|..+. .... .++..-=+.|-..+....++++....++.-|+|...
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~--~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~D 273 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA--TTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQD 273 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH--HhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECCC
Confidence 47999999999999999997654 1111 122222222322221112334444455677777664
No 135
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.19 E-value=0.14 Score=49.50 Aligned_cols=65 Identities=17% Similarity=0.126 Sum_probs=35.4
Q ss_pred CceEEEEecHHHHHHHHHHhhcc-cCCccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE-KGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
-+|+|.||||||.+|..+|-.+. ....+..++..-=+.|-..+....++++.-...+.-|+|..-
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~~D 383 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVNKQD 383 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEECCC
Confidence 37999999999999999996654 111111233222233333222222233333445666666554
No 136
>PLN02847 triacylglycerol lipase
Probab=93.17 E-value=0.14 Score=50.31 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=24.9
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcccCCcccccc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRIT 91 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt 91 (229)
+--++.|+||||||-||..++..+........++
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~ 282 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILREQKEFSSTT 282 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHhcCCCCCCce
Confidence 3348999999999999999998775222344444
No 137
>PLN02571 triacylglycerol lipase
Probab=93.05 E-value=0.15 Score=48.08 Aligned_cols=22 Identities=32% Similarity=0.457 Sum_probs=19.6
Q ss_pred ceEEEEecHHHHHHHHHHhhcc
Q psy15133 61 KLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 61 ~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+|++.||||||.+|-.+|-.+.
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHH
Confidence 6899999999999999987653
No 138
>PLN00413 triacylglycerol lipase
Probab=93.00 E-value=0.15 Score=48.87 Aligned_cols=24 Identities=33% Similarity=0.465 Sum_probs=20.6
Q ss_pred CCCceEEEEecHHHHHHHHHHhhc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+-.++++.||||||.+|..++..+
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHH
Confidence 456899999999999999998653
No 139
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=92.93 E-value=0.46 Score=48.28 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=59.6
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCC-------------CCCCCCceEEEEecHHHH
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHP-------------RGVPPEKLHLLGWSIGAH 72 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~-------------~~~~~~~ihlIGhSLGAh 72 (229)
.|+...+|+|+++|-++.+.+.-... ... +.-.+.....|++|..+. ......+|-++|.|+||.
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT-TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc-cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 46777899999999999876643221 111 233456677888886211 122357999999999999
Q ss_pred HHHHHHhhcccCCccccccccCCc
Q psy15133 73 IAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 73 IAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
++-.++..-+ ..++.|+...+.
T Consensus 351 ~~~~aAa~~p--p~LkAIVp~a~i 372 (767)
T PRK05371 351 LPNAVATTGV--EGLETIIPEAAI 372 (767)
T ss_pred HHHHHHhhCC--CcceEEEeeCCC
Confidence 9998877654 567777765444
No 140
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=92.54 E-value=0.29 Score=41.91 Aligned_cols=82 Identities=21% Similarity=0.109 Sum_probs=52.1
Q ss_pred cccCCeEEEEEcCCCCCCCcc-hhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPC-IDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~-y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
|...++.++..|+++-+.+.- +-.. +..+ ++.+..+++|. ...-......|+|+|.||.||+.++.+.+ +.
T Consensus 56 l~~~G~atlRfNfRgVG~S~G~fD~G---iGE~-~Da~aaldW~~--~~hp~s~~~~l~GfSFGa~Ia~~la~r~~--e~ 127 (210)
T COG2945 56 LVKRGFATLRFNFRGVGRSQGEFDNG---IGEL-EDAAAALDWLQ--ARHPDSASCWLAGFSFGAYIAMQLAMRRP--EI 127 (210)
T ss_pred HHhCCceEEeecccccccccCcccCC---cchH-HHHHHHHHHHH--hhCCCchhhhhcccchHHHHHHHHHHhcc--cc
Confidence 567889999999998776531 2111 2233 23345567775 22223334589999999999999999876 44
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
..-|..+=|..
T Consensus 128 ~~~is~~p~~~ 138 (210)
T COG2945 128 LVFISILPPIN 138 (210)
T ss_pred cceeeccCCCC
Confidence 44444444443
No 141
>KOG3101|consensus
Probab=92.49 E-value=0.035 Score=48.28 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 40 GACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 40 g~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
...+.+|.+.|......+++.++-|.|||||||=|...+.+- +.|-..+.+.-|-
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn--~~kykSvSAFAPI 175 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN--PSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcC--cccccceeccccc
Confidence 334455555554223477888999999999999776655443 3788888887774
No 142
>KOG2385|consensus
Probab=92.45 E-value=0.12 Score=50.07 Aligned_cols=109 Identities=19% Similarity=0.155 Sum_probs=70.7
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc---cCCccccccccCCccccccCCCcccCcC-
Q psy15133 35 SPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE---KGRKLGRITGLDPTIIFYQTNNKTKDLD- 110 (229)
Q Consensus 35 ~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~---~~~~v~rIt~LDPAgp~f~~~~~~~rL~- 110 (229)
.....|+.+|+.+.. ...+.-.|+||||||||-|--..-..+. .-+-|.+++.+-.--|. ++...+.
T Consensus 427 Ra~kaG~lLAe~L~~-----r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~----k~~~w~k~ 497 (633)
T KOG2385|consen 427 RADKAGELLAEALCK-----RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT----KAKLWLKA 497 (633)
T ss_pred HHHHHHHHHHHHHHH-----hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC----CHHHHHHH
Confidence 345678888876643 2446678999999999999875555443 12456666666432221 1122222
Q ss_pred -C-CCCCeEEEEEcCCCCCCCcccCCCcceeecCCcCCCCCCCC
Q psy15133 111 -S-TDALFVDVIHTAAGVLGQWGPSGHADYYVNGGTSQPGCGSF 152 (229)
Q Consensus 111 -~-~DA~fVdvIHT~~~~~G~~~~~Gh~DfypNgG~~QPgC~~~ 152 (229)
. =.-.||.+.-|+...||+.-+.--.-|-.=+|.+||-|...
T Consensus 498 r~vVsGRFVNgYs~nDW~L~~lfRa~s~~~~avaGi~~~~~i~g 541 (633)
T KOG2385|consen 498 RSVVSGRFVNGYSTNDWTLGYLFRASSAQFGAVAGIPQPICIPG 541 (633)
T ss_pred HhheecceeeeeecchHHHHHHHHHhhcccccccCCCccccCCC
Confidence 1 12489999999998888775555555655567889999754
No 143
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=92.44 E-value=0.37 Score=44.58 Aligned_cols=51 Identities=25% Similarity=0.242 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
.....++++|. .. +..++-|.|.|||||+|..+|...+ ..|.-+-.|-|..
T Consensus 160 ~E~~~Ll~Wl~--~~--G~~~~g~~G~SmGG~~A~laa~~~p--~pv~~vp~ls~~s 210 (348)
T PF09752_consen 160 LESRALLHWLE--RE--GYGPLGLTGISMGGHMAALAASNWP--RPVALVPCLSWSS 210 (348)
T ss_pred HHHHHHHHHHH--hc--CCCceEEEEechhHhhHHhhhhcCC--CceeEEEeecccC
Confidence 34466778886 22 5569999999999999999999887 6677666666643
No 144
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.44 E-value=0.11 Score=48.95 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=57.7
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc--cC
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE--KG 84 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~--~~ 84 (229)
.|++.++.||-||=- .|.=.....+.++.+++++|++-. ...+..++.|||+|.||-|-=++=++++ +.
T Consensus 282 ~l~~~gvpVvGvdsL------RYfW~~rtPe~~a~Dl~r~i~~y~---~~w~~~~~~liGySfGADvlP~~~n~L~~~~r 352 (456)
T COG3946 282 ALQKQGVPVVGVDSL------RYFWSERTPEQIAADLSRLIRFYA---RRWGAKRVLLIGYSFGADVLPFAYNRLPPATR 352 (456)
T ss_pred HHHHCCCceeeeehh------hhhhccCCHHHHHHHHHHHHHHHH---HhhCcceEEEEeecccchhhHHHHHhCCHHHH
Confidence 477888999998832 232234455678999999999874 3567889999999999999999888887 33
Q ss_pred Ccccccccc
Q psy15133 85 RKLGRITGL 93 (229)
Q Consensus 85 ~~v~rIt~L 93 (229)
++|.-++.|
T Consensus 353 ~~v~~~~ll 361 (456)
T COG3946 353 QRVRMVSLL 361 (456)
T ss_pred HHHHHHHHH
Confidence 455555544
No 145
>PLN02324 triacylglycerol lipase
Probab=92.12 E-value=0.24 Score=46.78 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=19.3
Q ss_pred ceEEEEecHHHHHHHHHHhhc
Q psy15133 61 KLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 61 ~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+|++.||||||.+|-.+|-.+
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 699999999999999999765
No 146
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.79 E-value=1 Score=39.09 Aligned_cols=84 Identities=19% Similarity=0.146 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCCCc-chhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhccc-----CC
Q psy15133 12 DYNVIVVDYGSLVVVP-CIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEK-----GR 85 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~-~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~-----~~ 85 (229)
++++..|+|+..-.-. .. ....--..|++-++.+...+. ...-.-+++.++|+|.||.||+.+.+++.. ..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~-~~~t~~~Sv~~G~~~L~~ai~--~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~ 78 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGI-GSPTYDESVAEGVANLDAAIR--AAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPD 78 (225)
T ss_pred CcceEEecCCchhcCcCCC-CCCccchHHHHHHHHHHHHHH--hhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcC
Confidence 5788889987632100 00 000011234555566666664 111266889999999999999999988751 12
Q ss_pred ccccccccCCccc
Q psy15133 86 KLGRITGLDPTII 98 (229)
Q Consensus 86 ~v~rIt~LDPAgp 98 (229)
.+.=+..=||..|
T Consensus 79 ~l~fVl~gnP~rp 91 (225)
T PF08237_consen 79 DLSFVLIGNPRRP 91 (225)
T ss_pred ceEEEEecCCCCC
Confidence 4555555677665
No 147
>PLN02162 triacylglycerol lipase
Probab=91.78 E-value=0.25 Score=47.29 Aligned_cols=24 Identities=29% Similarity=0.350 Sum_probs=20.4
Q ss_pred CCCceEEEEecHHHHHHHHHHhhc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+..++++.||||||.+|-.++..+
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHH
Confidence 446899999999999999987654
No 148
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.72 E-value=0.54 Score=42.65 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=50.9
Q ss_pred ccccccCCeEEEEEc-----CCCCCCCcchhhc--ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHH
Q psy15133 5 IAYFHKGDYNVIVVD-----YGSLVVVPCIDQI--SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLT 77 (229)
Q Consensus 5 ~a~l~~~d~nVI~vD-----w~~~a~~~~y~~a--~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~ 77 (229)
|++-.++++=|...| |.....--+|..+ ...+.+|+ .|.+++..|. ++.++++++|++.|-|-||.+|..+
T Consensus 84 d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVg-flr~lva~l~-~~~gidp~RVyvtGlS~GG~Ma~~l 161 (312)
T COG3509 84 DALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVG-FLRALVAKLV-NEYGIDPARVYVTGLSNGGRMANRL 161 (312)
T ss_pred hhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHH-HHHHHHHHHH-HhcCcCcceEEEEeeCcHHHHHHHH
Confidence 444566777777776 4222111122111 33455554 5677777776 4569999999999999999999999
Q ss_pred Hhhcc
Q psy15133 78 ANYVE 82 (229)
Q Consensus 78 g~~~~ 82 (229)
+-..+
T Consensus 162 ac~~p 166 (312)
T COG3509 162 ACEYP 166 (312)
T ss_pred HhcCc
Confidence 98876
No 149
>PLN02753 triacylglycerol lipase
Probab=91.69 E-value=0.24 Score=48.10 Aligned_cols=66 Identities=17% Similarity=0.130 Sum_probs=36.8
Q ss_pred CCceEEEEecHHHHHHHHHHhhcc-cC-C-----ccccccccCCccccccCCCcccCcCCCCCCeEEEEEcCC
Q psy15133 59 PEKLHLLGWSIGAHIAGLTANYVE-KG-R-----KLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAA 124 (229)
Q Consensus 59 ~~~ihlIGhSLGAhIAg~~g~~~~-~~-~-----~v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~~ 124 (229)
.-+|++.||||||.+|-.+|-.+. .+ . +.-.|+..-=+.|-..+.....+++....++.-|+|..-
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~~D 383 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNVRFKDRMEELGVKVLRVVNVHD 383 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCHHHHHHHHhcCCCEEEEEeCCC
Confidence 458999999999999999987653 00 0 111122222233333222222334433456677777664
No 150
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=91.40 E-value=0.48 Score=42.42 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=50.7
Q ss_pred cCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcC-C-CCCCC-CceEEEEecHHHHHHHHHHhhcc-cCC
Q psy15133 10 KGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQH-P-RGVPP-EKLHLLGWSIGAHIAGLTANYVE-KGR 85 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~-~-~~~~~-~~ihlIGhSLGAhIAg~~g~~~~-~~~ 85 (229)
..+|.|++.|+.+.+. .|... +.-|..+-+.|+...+. . .++.. .++-|+|||=||+-++.++..-+ .-.
T Consensus 24 ~~GyaVv~pDY~Glg~--~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 24 ARGYAVVAPDYEGLGT--PYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HCCCEEEecCCCCCCC--cccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 4689999999988876 35432 23344444444443211 1 24443 58999999999999998875433 112
Q ss_pred ccc-cccccCCcccc
Q psy15133 86 KLG-RITGLDPTIIF 99 (229)
Q Consensus 86 ~v~-rIt~LDPAgp~ 99 (229)
.+. +|.|--..+|-
T Consensus 98 eL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPP 112 (290)
T ss_pred ccccceeEEeccCCc
Confidence 233 45555445543
No 151
>KOG2984|consensus
Probab=90.84 E-value=0.16 Score=44.07 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=53.3
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChH---HHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPS---FAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLG 88 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~---~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~ 88 (229)
.+.||+.|-++.+.+- -++-..-+. .-+++.-.+++ .++++++.|.|.|=||-.|-.+|...+ ++|.
T Consensus 71 ~~TivawDPpGYG~Sr-PP~Rkf~~~ff~~Da~~avdLM~-------aLk~~~fsvlGWSdGgiTalivAak~~--e~v~ 140 (277)
T KOG2984|consen 71 QVTIVAWDPPGYGTSR-PPERKFEVQFFMKDAEYAVDLME-------ALKLEPFSVLGWSDGGITALIVAAKGK--EKVN 140 (277)
T ss_pred ceEEEEECCCCCCCCC-CCcccchHHHHHHhHHHHHHHHH-------HhCCCCeeEeeecCCCeEEEEeeccCh--hhhh
Confidence 3899999999988763 122122222 22344444444 447899999999999999999988877 8999
Q ss_pred cccccCCc
Q psy15133 89 RITGLDPT 96 (229)
Q Consensus 89 rIt~LDPA 96 (229)
|++-.-.+
T Consensus 141 rmiiwga~ 148 (277)
T KOG2984|consen 141 RMIIWGAA 148 (277)
T ss_pred hheeeccc
Confidence 99876554
No 152
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=90.28 E-value=1.1 Score=40.87 Aligned_cols=85 Identities=14% Similarity=0.038 Sum_probs=52.0
Q ss_pred ccCCeEEEEEcCCCCC-CCcchh------------hcccC------hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecH
Q psy15133 9 HKGDYNVIVVDYGSLV-VVPCID------------QISWS------PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSI 69 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a-~~~~y~------------~a~~~------~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSL 69 (229)
...++-|+.+|.++.+ .+..+. ....+ .+.+-.+.-..++.|. ....++.++|.+.|.|.
T Consensus 106 a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~-slpevD~~rI~v~G~Sq 184 (320)
T PF05448_consen 106 AAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLR-SLPEVDGKRIGVTGGSQ 184 (320)
T ss_dssp HHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHH-TSTTEEEEEEEEEEETH
T ss_pred ccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHH-hCCCcCcceEEEEeecC
Confidence 4578899999998877 221110 11111 1223344555567776 23477889999999999
Q ss_pred HHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 70 GAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 70 GAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
||.++..++..- .+|.+....-|+.
T Consensus 185 GG~lal~~aaLd---~rv~~~~~~vP~l 209 (320)
T PF05448_consen 185 GGGLALAAAALD---PRVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHHHS---ST-SEEEEESESS
T ss_pred chHHHHHHHHhC---ccccEEEecCCCc
Confidence 999999998763 4677777666654
No 153
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=90.18 E-value=0.53 Score=39.60 Aligned_cols=57 Identities=18% Similarity=0.265 Sum_probs=43.7
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 34 WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 34 ~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
...+...+.++++-+.+. . -...+.||+||||.-.+...+.... .+|.-+..+-|+-
T Consensus 38 w~~P~~~dWi~~l~~~v~----a-~~~~~vlVAHSLGc~~v~h~~~~~~--~~V~GalLVAppd 94 (181)
T COG3545 38 WEAPVLDDWIARLEKEVN----A-AEGPVVLVAHSLGCATVAHWAEHIQ--RQVAGALLVAPPD 94 (181)
T ss_pred CCCCCHHHHHHHHHHHHh----c-cCCCeEEEEecccHHHHHHHHHhhh--hccceEEEecCCC
Confidence 345567888898888885 1 2445999999999999999888876 6787777776654
No 154
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=90.01 E-value=0.59 Score=41.67 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=35.3
Q ss_pred CCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 55 RGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 55 ~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
...+.++..|+||||||-++.++....| ...++....-|+-
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~~p--~~F~~y~~~SPSl 172 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLTYP--DCFGRYGLISPSL 172 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhcCc--chhceeeeecchh
Confidence 3667788999999999999999998876 7888888888873
No 155
>PLN02761 lipase class 3 family protein
Probab=89.86 E-value=0.43 Score=46.35 Aligned_cols=23 Identities=26% Similarity=0.369 Sum_probs=20.1
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-+|++.||||||.+|-.+|-.+.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 37999999999999999997653
No 156
>PLN02934 triacylglycerol lipase
Probab=89.80 E-value=0.45 Score=46.05 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=20.6
Q ss_pred CCCceEEEEecHHHHHHHHHHhhc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+-.++++.||||||.+|-.++..+
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHH
Confidence 456899999999999999998654
No 157
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.79 E-value=0.82 Score=43.23 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=29.2
Q ss_pred CCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccC
Q psy15133 55 RGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLD 94 (229)
Q Consensus 55 ~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LD 94 (229)
.|.++++|+|+|||-||+.+..+...-.....+.|.+.+-
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~s 210 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQS 210 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhc
Confidence 3789999999999999999988765422123456666554
No 158
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=89.72 E-value=0.95 Score=41.42 Aligned_cols=71 Identities=17% Similarity=0.142 Sum_probs=48.1
Q ss_pred CCeEEEEEcCCCCCCCcchhh----cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQ----ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~----a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+..|||-||.+.+.-.+ |.. ...+...+++++.+||+.+...-..+.-.+++|.|-|-|||-+-.++.++-
T Consensus 84 ~~an~l~iD~PvGtGfS-~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFS-YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp GTSEEEEE--STTSTT--EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccceEEEeecCceEEe-eccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 45899999987654322 221 234677889999888877652222556668999999999999877777764
No 159
>KOG1838|consensus
Probab=89.63 E-value=0.52 Score=44.45 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=42.1
Q ss_pred ccCCeEEEEEcCCCCCCCcchh---hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHH
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCID---QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGL 76 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~---~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~ 76 (229)
++.+|+|+++.-++.+.++--+ .-..++ .++.++++.+. ...+..++..+|+||||.|-..
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t----~Dl~~~v~~i~---~~~P~a~l~avG~S~Gg~iL~n 214 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTPRLFTAGWT----EDLREVVNHIK---KRYPQAPLFAVGFSMGGNILTN 214 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCCceeecCCH----HHHHHHHHHHH---HhCCCCceEEEEecchHHHHHH
Confidence 4677999999999976543110 112233 55667777775 3557789999999999998654
No 160
>PLN02719 triacylglycerol lipase
Probab=89.58 E-value=0.44 Score=46.20 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=20.2
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-+|++.||||||.+|-.+|-.+.
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~ 320 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVA 320 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHH
Confidence 37999999999999999987664
No 161
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=89.25 E-value=0.54 Score=33.97 Aligned_cols=41 Identities=12% Similarity=-0.100 Sum_probs=27.6
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHH
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLA 47 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i 47 (229)
+|...+++|++.|+++++.+........+...+-+++.+|+
T Consensus 38 ~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 38 FLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred HHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 57789999999999999998632222334455555555443
No 162
>KOG2624|consensus
Probab=88.80 E-value=0.23 Score=46.88 Aligned_cols=54 Identities=20% Similarity=0.254 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCccccccccCCcc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGRITGLDPTI 97 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt~LDPAg 97 (229)
.+|..+|+.+.+ .-+.+++|.||||.|.-+.-.+...-+ ...||+.+.+|-|+.
T Consensus 145 yDLPA~IdyIL~---~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 145 YDLPAMIDYILE---KTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cCHHHHHHHHHH---hccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 456667777652 226799999999999987766555443 347899999999997
No 163
>KOG2112|consensus
Probab=88.07 E-value=1.1 Score=38.59 Aligned_cols=59 Identities=25% Similarity=0.287 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccc
Q psy15133 36 PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTII 98 (229)
Q Consensus 36 ~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp 98 (229)
....++.++.+++.-. ..+++.++|-+-|+|+||.+|.+++-.++ ..+.-+.++-+-.|
T Consensus 71 ~~~aa~~i~~Li~~e~--~~Gi~~~rI~igGfs~G~a~aL~~~~~~~--~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEP--ANGIPSNRIGIGGFSQGGALALYSALTYP--KALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHHHHHHHHH--HcCCCccceeEcccCchHHHHHHHHhccc--cccceeeccccccc
Confidence 3456677788887765 46999999999999999999999999886 77777777665555
No 164
>COG0627 Predicted esterase [General function prediction only]
Probab=87.47 E-value=0.9 Score=41.48 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=24.7
Q ss_pred CceEEEEecHHHHHHHHHHhhcccCCcccccccc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGL 93 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~L 93 (229)
++--++|||||||=|..+|.+.+ ++......+
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~p--d~f~~~sS~ 183 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKHP--DRFKSASSF 183 (316)
T ss_pred CCceeEEEeccchhhhhhhhhCc--chhceeccc
Confidence 47899999999999999888875 555544443
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=86.91 E-value=2 Score=38.96 Aligned_cols=81 Identities=11% Similarity=-0.013 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccccC-CCcccCcCCCCCCe
Q psy15133 38 FAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQT-NNKTKDLDSTDALF 116 (229)
Q Consensus 38 ~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f~~-~~~~~rL~~~DA~f 116 (229)
.+-..|...+.++. ..+..++.||||+.||..+-.+-...+ ...+..++.++|-.|--.. ....+.|..-.---
T Consensus 175 ~~~ari~Aa~~~~~----~~~~~~ivlIg~G~gA~~~~~~la~~~-~~~~daLV~I~a~~p~~~~n~~l~~~la~l~iPv 249 (310)
T PF12048_consen 175 RLFARIEAAIAFAQ----QQGGKNIVLIGHGTGAGWAARYLAEKP-PPMPDALVLINAYWPQPDRNPALAEQLAQLKIPV 249 (310)
T ss_pred HHHHHHHHHHHHHH----hcCCceEEEEEeChhHHHHHHHHhcCC-CcccCeEEEEeCCCCcchhhhhHHHHhhccCCCE
Confidence 45667777777775 335667999999999998876655544 3568899999998776544 22233444444444
Q ss_pred EEEEEcC
Q psy15133 117 VDVIHTA 123 (229)
Q Consensus 117 VdvIHT~ 123 (229)
.|+++.+
T Consensus 250 LDi~~~~ 256 (310)
T PF12048_consen 250 LDIYSAD 256 (310)
T ss_pred EEEecCC
Confidence 4554444
No 166
>KOG1553|consensus
Probab=86.14 E-value=1.6 Score=40.78 Aligned_cols=63 Identities=22% Similarity=0.285 Sum_probs=43.1
Q ss_pred CeEEEEEcCCCCCCCc--chhhcccChHHHHHHHHHH-HHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 12 DYNVIVVDYGSLVVVP--CIDQISWSPSFAGACIAQL-AYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~--~y~~a~~~~~~vg~~la~~-i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.|.|+--+.++++.+. .|+. |+....+.+-+| |+.| +...++|.|.|+|.||.-+..+|..+|
T Consensus 268 gYsvLGwNhPGFagSTG~P~p~---n~~nA~DaVvQfAI~~L-----gf~~edIilygWSIGGF~~~waAs~YP 333 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPYPV---NTLNAADAVVQFAIQVL-----GFRQEDIILYGWSIGGFPVAWAASNYP 333 (517)
T ss_pred CceeeccCCCCccccCCCCCcc---cchHHHHHHHHHHHHHc-----CCCccceEEEEeecCCchHHHHhhcCC
Confidence 4666666667776553 2433 333333333333 3434 889999999999999999999999987
No 167
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=86.10 E-value=0.9 Score=44.90 Aligned_cols=75 Identities=17% Similarity=0.151 Sum_probs=47.7
Q ss_pred cccccCCeEEEEEcCCCCCCCc-chhhcc---cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVP-CIDQIS---WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~-~y~~a~---~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
.+|...+|.|+.+|.++-.-.. .+.++. ..... -+++-+.+++|. ....++.++++|.|||-||.++..++...
T Consensus 417 q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~-~~D~~~~~~~l~-~~~~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 417 QVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD-LEDLIAAVDALV-KLPLVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc-HHHHHHHHHHHH-hCCCcChHHeEEeccChHHHHHHHHHhcC
Confidence 3566789999999998644210 111111 11112 234444456664 24477889999999999999999888664
Q ss_pred c
Q psy15133 82 E 82 (229)
Q Consensus 82 ~ 82 (229)
+
T Consensus 495 ~ 495 (620)
T COG1506 495 P 495 (620)
T ss_pred c
Confidence 3
No 168
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=85.28 E-value=1.5 Score=39.85 Aligned_cols=84 Identities=20% Similarity=0.120 Sum_probs=45.3
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCC-CCCCceEEEEecHHHHHHHHHHhhcc---c
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRG-VPPEKLHLLGWSIGAHIAGLTANYVE---K 83 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~-~~~~~ihlIGhSLGAhIAg~~g~~~~---~ 83 (229)
|...++.|+.+-++.--.. | .......=++.|+++|+.|.....| .+.++|.|+|||-|.|.+..+-.... .
T Consensus 59 L~~~~wsl~q~~LsSSy~G--~--G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~ 134 (303)
T PF08538_consen 59 LEETGWSLFQVQLSSSYSG--W--GTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPS 134 (303)
T ss_dssp HT-TT-EEEEE--GGGBTT--S---S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---
T ss_pred hccCCeEEEEEEecCccCC--c--CcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcccc
Confidence 4556888888887542111 1 1112233356778888888621112 47899999999999999998877654 1
Q ss_pred CCccccccccCC
Q psy15133 84 GRKLGRITGLDP 95 (229)
Q Consensus 84 ~~~v~rIt~LDP 95 (229)
..+|..++.--|
T Consensus 135 ~~~VdG~ILQAp 146 (303)
T PF08538_consen 135 RPPVDGAILQAP 146 (303)
T ss_dssp CCCEEEEEEEEE
T ss_pred ccceEEEEEeCC
Confidence 245666665444
No 169
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=85.13 E-value=3.3 Score=37.33 Aligned_cols=79 Identities=11% Similarity=0.009 Sum_probs=54.4
Q ss_pred cCCeEEEEEcCCCCCCCc-chhhc--ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 10 KGDYNVIVVDYGSLVVVP-CIDQI--SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~-~y~~a--~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
.+++.|+=||-++....- ..+.. .-++..+|+.|.+.++.+ +++.+..+|--.||.|-...|-..+ ++
T Consensus 53 ~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~p--~~ 123 (283)
T PF03096_consen 53 LQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKHP--ER 123 (283)
T ss_dssp HTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHSG--GG
T ss_pred hhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccCc--cc
Confidence 467899999998864321 11111 224678888888888888 5789999999999999999998887 99
Q ss_pred cccccccCCcc
Q psy15133 87 LGRITGLDPTI 97 (229)
Q Consensus 87 v~rIt~LDPAg 97 (229)
|..++++.|..
T Consensus 124 V~GLiLvn~~~ 134 (283)
T PF03096_consen 124 VLGLILVNPTC 134 (283)
T ss_dssp EEEEEEES---
T ss_pred eeEEEEEecCC
Confidence 99999988863
No 170
>KOG3975|consensus
Probab=84.88 E-value=1.7 Score=38.84 Aligned_cols=70 Identities=17% Similarity=0.126 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccccccCCCcccCcCC
Q psy15133 39 AGACIAQLAYYLSQHPRGV-PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQTNNKTKDLDS 111 (229)
Q Consensus 39 vg~~la~~i~~L~~~~~~~-~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f~~~~~~~rL~~ 111 (229)
+.++|-.-+.++.+ -+ .-.+++|||||.||.+...+-...+....|.+..+|=|.----..++...|+.+
T Consensus 91 L~~QV~HKlaFik~---~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~ 161 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKE---YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK 161 (301)
T ss_pred hhhHHHHHHHHHHH---hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee
Confidence 45566666666652 22 235899999999999998877654334678888888665433333333344443
No 171
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=84.82 E-value=1.5 Score=39.22 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc---cCCccccccccCCccccc
Q psy15133 37 SFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE---KGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 37 ~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~---~~~~v~rIt~LDPAgp~f 100 (229)
..-...+...+..|. ...+.+++.+|||||||--.-++...+. .-..|..++.|+ +|+-
T Consensus 116 ~~~s~wlk~~msyL~---~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~--gpfN 177 (288)
T COG4814 116 LDQSKWLKKAMSYLQ---KHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLA--GPFN 177 (288)
T ss_pred hhHHHHHHHHHHHHH---HhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEec--cccc
Confidence 345678888888896 3678899999999999976666554443 123688888884 5554
No 172
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=84.61 E-value=2.3 Score=39.73 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=47.2
Q ss_pred CeEEEEEcCCCCC---CCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCC---
Q psy15133 12 DYNVIVVDYGSLV---VVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGR--- 85 (229)
Q Consensus 12 d~nVI~vDw~~~a---~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~--- 85 (229)
+.-|+++|++-.. ....|+. .+ .++.+..+.|.+ ..+.++|+|+|-|-|||+|-.+-+++....
T Consensus 154 ~~SILvLDYsLt~~~~~~~~yPt------QL-~qlv~~Y~~Lv~---~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~ 223 (374)
T PF10340_consen 154 EVSILVLDYSLTSSDEHGHKYPT------QL-RQLVATYDYLVE---SEGNKNIILMGDSAGGNLALSFLQYLKKPNKLP 223 (374)
T ss_pred CCeEEEEeccccccccCCCcCch------HH-HHHHHHHHHHHh---ccCCCeEEEEecCccHHHHHHHHHHHhhcCCCC
Confidence 5689999998665 3333442 22 333444566652 225689999999999999988877775111
Q ss_pred ccccccccCCc
Q psy15133 86 KLGRITGLDPT 96 (229)
Q Consensus 86 ~v~rIt~LDPA 96 (229)
.-++++++-|.
T Consensus 224 ~Pk~~iLISPW 234 (374)
T PF10340_consen 224 YPKSAILISPW 234 (374)
T ss_pred CCceeEEECCC
Confidence 13455555554
No 173
>KOG2369|consensus
Probab=84.48 E-value=1 Score=43.13 Aligned_cols=39 Identities=15% Similarity=0.109 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
..++++|+... +--+-+++.||+||||+.+.-+.=+..+
T Consensus 166 ~kLK~~iE~~~---~~~G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 166 SKLKKKIETMY---KLNGGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHH---HHcCCCceEEEecCCccHHHHHHHhccc
Confidence 34455555443 1223489999999999999988877765
No 174
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=84.33 E-value=0.88 Score=41.43 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=24.0
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-.+-.++.|-||||||.+|..+|.++.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC
Confidence 346679999999999999999999985
No 175
>KOG4540|consensus
Probab=84.33 E-value=0.88 Score=41.43 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=24.0
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-.+-.++.|-||||||.+|..+|.++.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC
Confidence 346679999999999999999999985
No 176
>KOG4667|consensus
Probab=82.76 E-value=1.6 Score=38.23 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=51.6
Q ss_pred cccccCCeEEEEEcCCCCCCCc--chhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVP--CIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~--~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+.|.++.+-++.+|+++.+.+. +|+ .+.+..++++...++.+. ++...=-.++|||=|+-|+-..+..+.
T Consensus 56 ~~~e~~gis~fRfDF~GnGeS~gsf~~---Gn~~~eadDL~sV~q~~s----~~nr~v~vi~gHSkGg~Vvl~ya~K~~ 127 (269)
T KOG4667|consen 56 KALEKEGISAFRFDFSGNGESEGSFYY---GNYNTEADDLHSVIQYFS----NSNRVVPVILGHSKGGDVVLLYASKYH 127 (269)
T ss_pred HHHHhcCceEEEEEecCCCCcCCcccc---CcccchHHHHHHHHHHhc----cCceEEEEEEeecCccHHHHHHHHhhc
Confidence 3577899999999999988764 332 233445588888888885 223233378999999999998887775
No 177
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=81.70 E-value=1.4 Score=43.64 Aligned_cols=37 Identities=8% Similarity=-0.018 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhh
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
..|.++|+.+.+ .-+-+++.|||||||++++-+.=+.
T Consensus 197 ~rLK~lIE~ay~---~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 197 SRLKSNIELMVA---TNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHHH---HcCCCeEEEEEeCCchHHHHHHHHh
Confidence 446666666541 1124789999999999999875443
No 178
>KOG4569|consensus
Probab=79.84 E-value=1.9 Score=39.50 Aligned_cols=65 Identities=17% Similarity=0.064 Sum_probs=39.3
Q ss_pred CCceEEEEecHHHHHHHHHHhhcc-cCCc-cccccccCCccccccCCCcccCcCCCCCCeEEEEEcC
Q psy15133 59 PEKLHLLGWSIGAHIAGLTANYVE-KGRK-LGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTA 123 (229)
Q Consensus 59 ~~~ihlIGhSLGAhIAg~~g~~~~-~~~~-v~rIt~LDPAgp~f~~~~~~~rL~~~DA~fVdvIHT~ 123 (229)
--+|.+-||||||.+|..++..+- .+.+ -.+++.+-=..|-+.+..-.+.++..-...--|||..
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn~~fa~~~d~~~~~s~Rvv~~~ 236 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGNLAFAEWHDELVPYSFRVVHRR 236 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcccHHHHHHHHhhCCcEEEEEcCC
Confidence 457999999999999999998775 1111 1244444445565544333344444445555555544
No 179
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=77.95 E-value=1.3 Score=27.20 Aligned_cols=26 Identities=31% Similarity=0.659 Sum_probs=16.0
Q ss_pred ceeecCCcCCCCCCCCCccccccccccc
Q psy15133 137 DYYVNGGTSQPGCGSFSIIEQLSCDHTK 164 (229)
Q Consensus 137 DfypNgG~~QPgC~~~~~~~~~~CsH~r 164 (229)
+|-=| ..||||.+.=.-...-.||.|
T Consensus 9 ~FvCn--T~QPGC~nvCyD~~fPiSh~R 34 (34)
T smart00037 9 DFVCN--TQQPGCENVCYDQAFPISHVR 34 (34)
T ss_pred hceec--CCCCCccceeccccccCccCC
Confidence 66666 789999863211234467765
No 180
>KOG2931|consensus
Probab=76.26 E-value=8.1 Score=35.27 Aligned_cols=77 Identities=13% Similarity=-0.027 Sum_probs=55.8
Q ss_pred CCeEEEEEcCCCCCCC-cchhhc--ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCcc
Q psy15133 11 GDYNVIVVDYGSLVVV-PCIDQI--SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKL 87 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~-~~y~~a--~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v 87 (229)
+.+.|+-||-+++... +..+.. .-..+.+|+.|-..++.+ +++.+.-+|---||.|-...|...| +||
T Consensus 77 ~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~hp--~rV 147 (326)
T KOG2931|consen 77 EHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNHP--ERV 147 (326)
T ss_pred hheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-------CcceEEEecccccHHHHHHHHhcCh--hhe
Confidence 3489999999876432 111111 123556676666666655 7889999999999999999998887 999
Q ss_pred ccccccCCc
Q psy15133 88 GRITGLDPT 96 (229)
Q Consensus 88 ~rIt~LDPA 96 (229)
..|+++.|-
T Consensus 148 ~GLvLIn~~ 156 (326)
T KOG2931|consen 148 LGLVLINCD 156 (326)
T ss_pred eEEEEEecC
Confidence 999987654
No 181
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=75.04 E-value=3.1 Score=38.76 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=21.1
Q ss_pred CCCCCceEEEEecHHHHHHHHHHh
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTAN 79 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~ 79 (229)
.++..+|-++|||+||+.+..++.
T Consensus 155 ~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 155 RLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred ccCccceEEEecccccHHHHHhcc
Confidence 678899999999999999988654
No 182
>COG3150 Predicted esterase [General function prediction only]
Probab=72.42 E-value=9.9 Score=32.07 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=29.2
Q ss_pred CCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcccccc
Q psy15133 59 PEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQ 101 (229)
Q Consensus 59 ~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f~ 101 (229)
-++.-|||-||||.-|-.+|.+.. =|-+.++||---++
T Consensus 58 ~~~p~ivGssLGGY~At~l~~~~G-----irav~~NPav~P~e 95 (191)
T COG3150 58 DESPLIVGSSLGGYYATWLGFLCG-----IRAVVFNPAVRPYE 95 (191)
T ss_pred CCCceEEeecchHHHHHHHHHHhC-----ChhhhcCCCcCchh
Confidence 345999999999999999998875 24567888854443
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=70.57 E-value=12 Score=36.32 Aligned_cols=43 Identities=21% Similarity=0.133 Sum_probs=31.4
Q ss_pred CCCCCCceEEEEecHHHHHHHHHHhhcc-cCCccccccccCCccc
Q psy15133 55 RGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGRITGLDPTII 98 (229)
Q Consensus 55 ~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rIt~LDPAgp 98 (229)
.|=+++||+|+|+|-||+.+-.+-.. | ..+-..|.+++-|+..
T Consensus 175 FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 175 FGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 37799999999999999977554322 2 2356777777777654
No 184
>KOG1551|consensus
Probab=70.20 E-value=5.5 Score=36.05 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCC
Q psy15133 42 CIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDP 95 (229)
Q Consensus 42 ~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDP 95 (229)
.|+++...+. .+...++.++-|+|-||||-+|..+|...+ ..|..+--|.|
T Consensus 178 ~I~E~~~lf~-Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q--~Pva~~p~l~~ 228 (371)
T KOG1551|consen 178 TIQEFVKLFT-WSSADGLGNLNLVGRSMGGDIANQVGSLHQ--KPVATAPCLNS 228 (371)
T ss_pred HHHHHHHhcc-cccccCcccceeeeeecccHHHHhhcccCC--CCccccccccc
Confidence 3445444332 245667889999999999999999999776 45555555554
No 185
>KOG2565|consensus
Probab=70.18 E-value=15 Score=34.72 Aligned_cols=69 Identities=13% Similarity=0.107 Sum_probs=47.5
Q ss_pred eEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 13 YNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
++||+.-.++.+-+..-..--.+.-.+ |.+++.|+ ..++.+++.|=|--.|+-|+..++..+| ++|..+
T Consensus 189 FEVI~PSlPGygwSd~~sk~GFn~~a~----ArvmrkLM---lRLg~nkffiqGgDwGSiI~snlasLyP--enV~Gl 257 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSKTGFNAAAT----ARVMRKLM---LRLGYNKFFIQGGDWGSIIGSNLASLYP--ENVLGL 257 (469)
T ss_pred EEEeccCCCCcccCcCCccCCccHHHH----HHHHHHHH---HHhCcceeEeecCchHHHHHHHHHhhcc--hhhhHh
Confidence 799999999888654222222233344 44444443 2447899999999999999999999988 554433
No 186
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=67.82 E-value=5.8 Score=34.26 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=23.3
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcccCCccccccccC
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLD 94 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LD 94 (229)
..+.|+||+.|||-.+|..+-+.. ++.+-+++.
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~----~~~~aiAIN 87 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGI----PFKRAIAIN 87 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccC----CcceeEEEE
Confidence 467999999999999987764433 344555543
No 187
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=66.89 E-value=9.1 Score=36.39 Aligned_cols=70 Identities=11% Similarity=-0.052 Sum_probs=42.8
Q ss_pred CCeEEEEEcCCCCCCCcchhhc----ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQI----SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a----~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+..|||-||-+.+.-.+ |... ..+.. .++++.+||..+.+.-..+...+++|+|.|-|||.+-.++.++.
T Consensus 114 ~~anllfiDqPvGtGfS-y~~~~~~~~~d~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~ 187 (433)
T PLN03016 114 KMANIIFLDQPVGSGFS-YSKTPIDKTGDIS-EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEIS 187 (433)
T ss_pred hcCcEEEecCCCCCCcc-CCCCCCCccCCHH-HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHH
Confidence 45899999987654322 3211 11222 33566666555431112344568999999999998888777664
No 188
>KOG3847|consensus
Probab=66.54 E-value=2.6 Score=38.87 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=28.6
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
.++.+++.+||||.||..+-+....- .+..--++||..
T Consensus 237 nl~~s~~aViGHSFGgAT~i~~ss~~---t~FrcaI~lD~W 274 (399)
T KOG3847|consen 237 NLDTSQAAVIGHSFGGATSIASSSSH---TDFRCAIALDAW 274 (399)
T ss_pred chhhhhhhheeccccchhhhhhhccc---cceeeeeeeeee
Confidence 45567889999999999887766543 356777888865
No 189
>COG4099 Predicted peptidase [General function prediction only]
Probab=65.55 E-value=9 Score=35.25 Aligned_cols=46 Identities=13% Similarity=0.106 Sum_probs=34.0
Q ss_pred HHHHH-HHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccc
Q psy15133 44 AQLAY-YLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITG 92 (229)
Q Consensus 44 a~~i~-~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~ 92 (229)
-++|+ .|. ....++-++|++||.|+||.-+..+...+| +....++.
T Consensus 253 idli~~vla-s~ynID~sRIYviGlSrG~~gt~al~~kfP--dfFAaa~~ 299 (387)
T COG4099 253 IDLILEVLA-STYNIDRSRIYVIGLSRGGFGTWALAEKFP--DFFAAAVP 299 (387)
T ss_pred HHHHHHHHh-hccCcccceEEEEeecCcchhhHHHHHhCc--hhhheeee
Confidence 34444 454 345889999999999999999999988887 55544443
No 190
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=65.45 E-value=18 Score=32.60 Aligned_cols=68 Identities=12% Similarity=-0.036 Sum_probs=41.7
Q ss_pred eEEEEEcCCCCCCCcchhhc----ccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 13 YNVIVVDYGSLVVVPCIDQI----SWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 13 ~nVI~vDw~~~a~~~~y~~a----~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.|||-||-+.+.--+ |... ..+...+ +++-.+|+.+.+.--.+.-.++||.|-|-|||-.=.++.++.
T Consensus 2 aNvLfiDqPvGvGfS-y~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~ 73 (319)
T PLN02213 2 ANIIFLDQPVGSGFS-YSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEIS 73 (319)
T ss_pred ccEEEecCCCCCCCC-CCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHH
Confidence 489999998554322 3211 1122233 555555554431122556678999999999998877777663
No 191
>KOG2029|consensus
Probab=65.34 E-value=14 Score=36.76 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=39.2
Q ss_pred cCCeEEEEEcCCCCCCCcc--hhhcccChHHHHHHHHHHHHHHhcCCCCCC-CCceEEEEecHHHHHH
Q psy15133 10 KGDYNVIVVDYGSLVVVPC--IDQISWSPSFAGACIAQLAYYLSQHPRGVP-PEKLHLLGWSIGAHIA 74 (229)
Q Consensus 10 ~~d~nVI~vDw~~~a~~~~--y~~a~~~~~~vg~~la~~i~~L~~~~~~~~-~~~ihlIGhSLGAhIA 74 (229)
.++.+||.+++...-. .+ |-.+...-+.++...-+|++.|. ..+++ -..|.-|||||||-.+
T Consensus 476 ~p~~Rii~l~Y~Tsit-~w~~~~p~e~~r~sl~~Rs~~lleql~--~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 476 YPKSRIIGLEYTTSIT-DWRARCPAEAHRRSLAARSNELLEQLQ--AAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred CccceEEEeecccchh-hhcccCcccchhhHHHHHHHHHHHHHH--HhccCCCCceEEEecccchHHH
Confidence 4668899988765221 11 11122223456666678888886 34776 5578899999999443
No 192
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=64.54 E-value=8.7 Score=34.91 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=32.9
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
..+.-.|+|-||||-+|..+|..++ ++.+++...-|.-
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~P--e~FG~V~s~Sps~ 212 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHP--ERFGHVLSQSGSF 212 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCc--hhhceeeccCCcc
Confidence 3456789999999999999999998 8999999887764
No 193
>PLN02633 palmitoyl protein thioesterase family protein
Probab=64.20 E-value=14 Score=33.80 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=24.7
Q ss_pred CceEEEEecHHHHHHHHHHhhcccCCcccccccc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGL 93 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~L 93 (229)
+-+|+||||=||+++=.+..+.+...+|..++-|
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 4699999999999997777676511256666655
No 194
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=63.46 E-value=11 Score=37.78 Aligned_cols=72 Identities=22% Similarity=0.278 Sum_probs=48.0
Q ss_pred HHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccc-----------cCCccccccCCCcccCcCCCCCCe
Q psy15133 48 YYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITG-----------LDPTIIFYQTNNKTKDLDSTDALF 116 (229)
Q Consensus 48 ~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~-----------LDPAgp~f~~~~~~~rL~~~DA~f 116 (229)
+.|.+ ..-.+.+++.++|-|-||.++|.++..-| +....|++ |||.-|+-... -.+.=++.|+++
T Consensus 516 ~~Lv~-~g~~~~~~i~a~GGSAGGmLmGav~N~~P--~lf~~iiA~VPFVDvltTMlD~slPLT~~E-~~EWGNP~d~e~ 591 (682)
T COG1770 516 RHLVK-EGYTSPDRIVAIGGSAGGMLMGAVANMAP--DLFAGIIAQVPFVDVLTTMLDPSLPLTVTE-WDEWGNPLDPEY 591 (682)
T ss_pred HHHHH-cCcCCccceEEeccCchhHHHHHHHhhCh--hhhhheeecCCccchhhhhcCCCCCCCccc-hhhhCCcCCHHH
Confidence 44541 23446789999999999999999998876 77777764 77777775332 123334456666
Q ss_pred EEEEEcC
Q psy15133 117 VDVIHTA 123 (229)
Q Consensus 117 VdvIHT~ 123 (229)
=+.|-+-
T Consensus 592 y~yikSY 598 (682)
T COG1770 592 YDYIKSY 598 (682)
T ss_pred HHHHhhc
Confidence 5555544
No 195
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=63.35 E-value=11 Score=31.72 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=26.8
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCcccccccc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGL 93 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~L 93 (229)
++.-..+.+-||||||-+|..++..+. -.|.-++.|
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~--A~i~~L~cl 120 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ--APIDGLVCL 120 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc--CCcceEEEe
Confidence 334457899999999999999999876 444444444
No 196
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=61.01 E-value=25 Score=31.20 Aligned_cols=67 Identities=16% Similarity=0.168 Sum_probs=37.8
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCC--ceEEEEecHHHHHHHHHHhhcc
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPE--KLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~--~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
..++|-||+.=+...- .+...| +.+-+..-.-++.|.+ ..++... .+.=||||||+-+-..++..+.
T Consensus 44 a~~Gy~ViAtPy~~tf--DH~~~A----~~~~~~f~~~~~~L~~-~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 44 ADRGYAVIATPYVVTF--DHQAIA----REVWERFERCLRALQK-RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HhCCcEEEEEecCCCC--cHHHHH----HHHHHHHHHHHHHHHH-hcCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 3567888877664321 122222 2233333333455541 2244433 5677999999999999887764
No 197
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=60.76 E-value=7 Score=33.80 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=15.1
Q ss_pred CCCceEEEEecHHHHHHHHH
Q psy15133 58 PPEKLHLLGWSIGAHIAGLT 77 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~ 77 (229)
+.+.|.++|||||--=.-+.
T Consensus 233 ~i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CCCEEEEEeCCCchhhHHHH
Confidence 56899999999986544443
No 198
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=58.71 E-value=25 Score=31.49 Aligned_cols=71 Identities=20% Similarity=0.190 Sum_probs=41.3
Q ss_pred cccccCCeEEEEEcCCCCC-CCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 6 AYFHKGDYNVIVVDYGSLV-VVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a-~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
.||...+++||..|-..+. .+..- -.......-.+.+...+++|. .-+..++-||.-||-|-||-.++...
T Consensus 51 ~YL~~NGFhViRyDsl~HvGlSsG~-I~eftms~g~~sL~~V~dwl~----~~g~~~~GLIAaSLSaRIAy~Va~~i 122 (294)
T PF02273_consen 51 EYLSANGFHVIRYDSLNHVGLSSGD-INEFTMSIGKASLLTVIDWLA----TRGIRRIGLIAASLSARIAYEVAADI 122 (294)
T ss_dssp HHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHH----HTT---EEEEEETTHHHHHHHHTTTS
T ss_pred HHHhhCCeEEEeccccccccCCCCC-hhhcchHHhHHHHHHHHHHHH----hcCCCcchhhhhhhhHHHHHHHhhcc
Confidence 4788999999999976543 21100 111223344567888889996 44678999999999999999988764
No 199
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=56.08 E-value=29 Score=34.26 Aligned_cols=85 Identities=14% Similarity=0.043 Sum_probs=56.0
Q ss_pred ccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCc
Q psy15133 7 YFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRK 86 (229)
Q Consensus 7 ~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~ 86 (229)
++...+|-||.+|-++-+.++--..-... + =+++-.+.|++|. .....-.+|-++|.|-+|...-.++..-+
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~-~-E~~Dg~D~I~Wia--~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~p---- 146 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESS-R-EAEDGYDTIEWLA--KQPWSNGNVGMLGLSYLGFTQLAAAALQP---- 146 (563)
T ss_pred eeecCceEEEEecccccccCCcccceecc-c-cccchhHHHHHHH--hCCccCCeeeeecccHHHHHHHHHHhcCC----
Confidence 56778999999999887766421111111 1 2345577788886 23556678999999999999999887654
Q ss_pred cccccccCCccccc
Q psy15133 87 LGRITGLDPTIIFY 100 (229)
Q Consensus 87 v~rIt~LDPAgp~f 100 (229)
+.|.++-|....+
T Consensus 147 -PaLkai~p~~~~~ 159 (563)
T COG2936 147 -PALKAIAPTEGLV 159 (563)
T ss_pred -chheeeccccccc
Confidence 3444444544433
No 200
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=55.90 E-value=16 Score=32.84 Aligned_cols=77 Identities=8% Similarity=0.005 Sum_probs=36.1
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
.+.-|..|+........-...--.++....+.+.+.|.... .+. +-+|+||||=||+++=.+..+.+ ...|..+
T Consensus 36 PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p----~L~-~G~~~IGfSQGgl~lRa~vq~c~-~~~V~nl 109 (279)
T PF02089_consen 36 PGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDP----ELA-NGFNAIGFSQGGLFLRAYVQRCN-DPPVHNL 109 (279)
T ss_dssp TT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-G----GGT-T-EEEEEETCHHHHHHHHHHH-T-SS-EEEE
T ss_pred CCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhCh----hhh-cceeeeeeccccHHHHHHHHHCC-CCCceeE
Confidence 56677777776543210000001122223333444343321 121 57999999999999977777765 3456655
Q ss_pred ccc
Q psy15133 91 TGL 93 (229)
Q Consensus 91 t~L 93 (229)
+.|
T Consensus 110 ISl 112 (279)
T PF02089_consen 110 ISL 112 (279)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 201
>PLN02209 serine carboxypeptidase
Probab=55.27 E-value=23 Score=33.73 Aligned_cols=70 Identities=10% Similarity=-0.039 Sum_probs=41.7
Q ss_pred CCeEEEEEcCCCCCCCcchhh----cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQ----ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~----a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
...|||-||-+.+.--+ |.. ...+. ..++.+.+||..+.+.--.....+++|.|.|-|||-+=.++..+.
T Consensus 116 ~~anllfiDqPvGtGfS-y~~~~~~~~~~~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~ 189 (437)
T PLN02209 116 KTANIIFLDQPVGSGFS-YSKTPIERTSDT-SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEIS 189 (437)
T ss_pred hcCcEEEecCCCCCCcc-CCCCCCCccCCH-HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHH
Confidence 45799999976654322 211 11222 334666666655431112344468999999999997666666553
No 202
>PRK10115 protease 2; Provisional
Probab=54.55 E-value=31 Score=34.71 Aligned_cols=83 Identities=10% Similarity=-0.039 Sum_probs=52.4
Q ss_pred cccCCeEEEEEcCCCCCCCc--chhhcccCh-HHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccC
Q psy15133 8 FHKGDYNVIVVDYGSLVVVP--CIDQISWSP-SFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKG 84 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~--~y~~a~~~~-~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~ 84 (229)
|...++-|+.++.++.+... ++......- ...-+++...++.|.+ ..-.+++++-+.|-|-||-+++.+..+.|
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~~~~~P-- 546 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVAINQRP-- 546 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHHHhcCh--
Confidence 44578999999998876432 121111100 0112334444566652 34578999999999999999999887765
Q ss_pred Ccccccccc
Q psy15133 85 RKLGRITGL 93 (229)
Q Consensus 85 ~~v~rIt~L 93 (229)
++.+-++..
T Consensus 547 dlf~A~v~~ 555 (686)
T PRK10115 547 ELFHGVIAQ 555 (686)
T ss_pred hheeEEEec
Confidence 555555543
No 203
>PLN02606 palmitoyl-protein thioesterase
Probab=53.35 E-value=28 Score=31.81 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=24.0
Q ss_pred CceEEEEecHHHHHHHHHHhhcccCCcccccccc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGL 93 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~L 93 (229)
+-+|+||||=||+++=.+..+.+...+|..++-|
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISl 128 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSL 128 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEe
Confidence 4699999999999997766666511245555544
No 204
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=52.74 E-value=71 Score=29.77 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=44.9
Q ss_pred CCeEEEEEcCCCCCCCcchhh-cc-----cChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQ-IS-----WSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~-a~-----~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-+.-||++..+-.|.+..+.. .. -+++..-++++.|++.+.......+-.++.++|-|.||.+|..+-..+|
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 345678888777776632221 11 1345566788888888862222334458999999999999999998887
No 205
>KOG4372|consensus
Probab=52.48 E-value=3.3 Score=39.08 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=33.2
Q ss_pred cccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 32 ISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 32 a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
....+..+|..+++.+..-. ...++++|-.|||||||-++-++=.++.
T Consensus 125 T~~Gv~~lG~Rla~~~~e~~---~~~si~kISfvghSLGGLvar~AIgyly 172 (405)
T KOG4372|consen 125 TFDGVDVLGERLAEEVKETL---YDYSIEKISFVGHSLGGLVARYAIGYLY 172 (405)
T ss_pred ccccceeeecccHHHHhhhh---hccccceeeeeeeecCCeeeeEEEEeec
Confidence 34456678888888644322 1345899999999999988877644443
No 206
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=50.89 E-value=14 Score=31.10 Aligned_cols=21 Identities=33% Similarity=0.417 Sum_probs=17.4
Q ss_pred eEEEEecHHHHHHHHHHhhcc
Q psy15133 62 LHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 62 ihlIGhSLGAhIAg~~g~~~~ 82 (229)
.-|||||.||-+|..+.....
T Consensus 104 dGvlGFSQGA~lAa~ll~~~~ 124 (212)
T PF03959_consen 104 DGVLGFSQGAALAALLLALQQ 124 (212)
T ss_dssp SEEEEETHHHHHHHHHHHHHH
T ss_pred EEEEeecHHHHHHHHHHHHHH
Confidence 469999999999998886543
No 207
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.92 E-value=28 Score=31.69 Aligned_cols=88 Identities=15% Similarity=0.009 Sum_probs=57.1
Q ss_pred ccCCeEEEEEcCCCCCCC----cchhhcc-------------cC---hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEec
Q psy15133 9 HKGDYNVIVVDYGSLVVV----PCIDQIS-------------WS---PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWS 68 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~----~~y~~a~-------------~~---~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhS 68 (229)
...+|-|+.+|-++.+.+ ..++... .+ .+.|-.++.+.++.|. +-..++.++|-+-|-|
T Consensus 106 a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~-sl~~vde~Ri~v~G~S 184 (321)
T COG3458 106 AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILA-SLDEVDEERIGVTGGS 184 (321)
T ss_pred cccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHh-ccCccchhheEEeccc
Confidence 457889999998887655 2232220 01 1233445556666665 2237889999999999
Q ss_pred HHHHHHHHHHhhcccCCccccccccCCccccc
Q psy15133 69 IGAHIAGLTANYVEKGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 69 LGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f 100 (229)
-||.||..++..- .||++..+.=|-.--|
T Consensus 185 qGGglalaaaal~---~rik~~~~~~Pfl~df 213 (321)
T COG3458 185 QGGGLALAAAALD---PRIKAVVADYPFLSDF 213 (321)
T ss_pred cCchhhhhhhhcC---hhhhcccccccccccc
Confidence 9999998888653 4777776665544333
No 208
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=46.73 E-value=12 Score=35.09 Aligned_cols=86 Identities=14% Similarity=0.021 Sum_probs=44.9
Q ss_pred cccCCeEEEEEcCCCCCCCcc---hhhcc-cChHHHHHHHHHHHHHHhcC--CCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPC---IDQIS-WSPSFAGACIAQLAYYLSQH--PRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~---y~~a~-~~~~~vg~~la~~i~~L~~~--~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+..++.=||.+.++-+..... ..... .|.... ++++. |+++.++ ..|=++++|+|.|||-||..++..-..-
T Consensus 152 ~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~-Dq~~A-L~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp 229 (535)
T PF00135_consen 152 AASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLL-DQRLA-LKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP 229 (535)
T ss_dssp HHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHH-HHHHH-HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG
T ss_pred ccCCCEEEEEecccccccccccccccccCchhhhhh-hhHHH-HHHHHhhhhhcccCCcceeeeeecccccccceeeecc
Confidence 345667777777765331100 00111 343322 22222 3443321 3366899999999999999998866542
Q ss_pred ccCCccccccccCC
Q psy15133 82 EKGRKLGRITGLDP 95 (229)
Q Consensus 82 ~~~~~v~rIt~LDP 95 (229)
...+...|.+..-+
T Consensus 230 ~~~~LF~raI~~SG 243 (535)
T PF00135_consen 230 SSKGLFHRAILQSG 243 (535)
T ss_dssp GGTTSBSEEEEES-
T ss_pred cccccccccccccc
Confidence 13456777776665
No 209
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=46.10 E-value=36 Score=29.70 Aligned_cols=25 Identities=32% Similarity=0.488 Sum_probs=19.5
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
|+.+ -.++|||||--.|..++..+.
T Consensus 80 Gi~p--~~~~GhSlGE~aA~~~ag~~~ 104 (298)
T smart00827 80 GVRP--DAVVGHSLGEIAAAYVAGVLS 104 (298)
T ss_pred CCcc--cEEEecCHHHHHHHHHhCCCC
Confidence 5544 589999999999988876553
No 210
>KOG1516|consensus
Probab=44.72 E-value=70 Score=30.64 Aligned_cols=26 Identities=31% Similarity=0.403 Sum_probs=21.8
Q ss_pred CCCCCCCceEEEEecHHHHHHHHHHh
Q psy15133 54 PRGVPPEKLHLLGWSIGAHIAGLTAN 79 (229)
Q Consensus 54 ~~~~~~~~ihlIGhSLGAhIAg~~g~ 79 (229)
..|=++++|+|+|||-||..+.+..-
T Consensus 189 ~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 189 SFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred hcCCCCCeEEEEeechhHHHHHHHhc
Confidence 34779999999999999999977543
No 211
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=44.33 E-value=55 Score=32.31 Aligned_cols=54 Identities=17% Similarity=0.062 Sum_probs=42.4
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccc
Q psy15133 35 SPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITG 92 (229)
Q Consensus 35 ~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~ 92 (229)
....|....+.|++.+. ...=+..+..|||..-||+.+..++...| ++++-|+.
T Consensus 117 Tl~DV~~ae~~Fv~~V~--~~hp~~~kp~liGnCQgGWa~~mlAA~~P--d~~gplvl 170 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVA--ERHPDAPKPNLIGNCQGGWAAMMLAALRP--DLVGPLVL 170 (581)
T ss_pred cHHHHHHHHHHHHHHHH--HhCCCCCCceEEeccHHHHHHHHHHhcCc--CccCceee
Confidence 45678888889998875 22223348999999999999999999887 88887774
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=43.81 E-value=62 Score=27.82 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhh
Q psy15133 40 GACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 40 g~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
++..+.|-.+|.+.+.| ..+.|+|||=|+.+.-.+=+.
T Consensus 78 ~DV~~AF~~yL~~~n~G---RPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 78 SDVRAAFDYYLANYNNG---RPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHhcCCC---CCEEEEEeChHHHHHHHHHHH
Confidence 45556666666522222 579999999999988776554
No 213
>KOG4840|consensus
Probab=42.44 E-value=29 Score=30.77 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=49.5
Q ss_pred ccccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHH-hhccc
Q psy15133 5 IAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTA-NYVEK 83 (229)
Q Consensus 5 ~a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g-~~~~~ 83 (229)
+.||....+-+|.+-.+..-.. | .....+.-.+.|..+|+.|. ..+.+. +|.|+|||-|-|=..++- ....
T Consensus 59 ~~~lde~~wslVq~q~~Ssy~G--~--Gt~slk~D~edl~~l~~Hi~--~~~fSt-~vVL~GhSTGcQdi~yYlTnt~~- 130 (299)
T KOG4840|consen 59 NRYLDENSWSLVQPQLRSSYNG--Y--GTFSLKDDVEDLKCLLEHIQ--LCGFST-DVVLVGHSTGCQDIMYYLTNTTK- 130 (299)
T ss_pred HHHHhhccceeeeeeccccccc--c--ccccccccHHHHHHHHHHhh--ccCccc-ceEEEecCccchHHHHHHHhccc-
Confidence 3456666677766654322110 1 11223334577888888775 345544 999999999999776654 2222
Q ss_pred CCccccccccCCc
Q psy15133 84 GRKLGRITGLDPT 96 (229)
Q Consensus 84 ~~~v~rIt~LDPA 96 (229)
+.+|..-++.-|.
T Consensus 131 ~r~iraaIlqApV 143 (299)
T KOG4840|consen 131 DRKIRAAILQAPV 143 (299)
T ss_pred hHHHHHHHHhCcc
Confidence 3556666666554
No 214
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=40.78 E-value=22 Score=34.61 Aligned_cols=81 Identities=14% Similarity=-0.028 Sum_probs=43.8
Q ss_pred CeEEEEEcCCCCCCCcc--hhhcccChHHHHHHHHHHHHHHhcC--CCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCc
Q psy15133 12 DYNVIVVDYGSLVVVPC--IDQISWSPSFAGACIAQLAYYLSQH--PRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRK 86 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~--y~~a~~~~~~vg~~la~~i~~L~~~--~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~ 86 (229)
..++|-+|.+-+.-... =.....+...+++++-.+++.+.+. ...-...+.||+|-|-|||=+-.+|..+. ...-
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred CCceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 35799999654432110 0112233334444444433332210 11223478999999999999988888876 1112
Q ss_pred cccccc
Q psy15133 87 LGRITG 92 (229)
Q Consensus 87 v~rIt~ 92 (229)
+++++.
T Consensus 226 ~~~~~n 231 (498)
T COG2939 226 LNGNVN 231 (498)
T ss_pred cCCceE
Confidence 455553
No 215
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=39.97 E-value=52 Score=28.88 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=18.5
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
..-.++|||+|--.|..++..+.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~~s 98 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGVLT 98 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCCCC
Confidence 55689999999998888876553
No 216
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=39.40 E-value=31 Score=30.75 Aligned_cols=25 Identities=20% Similarity=0.183 Sum_probs=19.8
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
++..-.++|||||=..|..++..+.
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aaG~ls 106 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAAGALS 106 (318)
T ss_dssp THCESEEEESTTHHHHHHHHTTSSS
T ss_pred ccccceeeccchhhHHHHHHCCccc
Confidence 3566678999999999998876654
No 217
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=39.15 E-value=65 Score=25.88 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+.+++.|. +.++.++ +++|-|.||.+|..++...
T Consensus 16 ~Gvl~~L~--~~~~~~d--~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALE--EAGIPID--IVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHH--HcCCCee--EEEEECHHHHHHHHHHcCC
Confidence 55567775 2355443 8999999999999988653
No 218
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.56 E-value=73 Score=27.18 Aligned_cols=34 Identities=29% Similarity=0.349 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+-+++.|. +.++.++ .++|-|.||-+|..++...
T Consensus 16 ~GvL~aL~--e~gi~~~--~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 16 LGFLAALL--EMGLEPS--AISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHH--HcCCCce--EEEEeCHHHHHHHHHHcCC
Confidence 44567775 3456554 7999999999999988643
No 219
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=35.95 E-value=63 Score=27.98 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=18.2
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
..-.++|||||=..|..++..+.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~ls 105 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGALD 105 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCCCC
Confidence 34579999999998888876554
No 220
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.74 E-value=76 Score=28.77 Aligned_cols=67 Identities=21% Similarity=0.106 Sum_probs=36.9
Q ss_pred cccccCCeEEEEEcCCCCCCCcchhhcccChHHHHHH----HHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHH
Q psy15133 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGAC----IAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGL 76 (229)
Q Consensus 6 a~l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~----la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~ 76 (229)
.|+..+|.-++++=++-.-+-..|..........++. |.+-+..|- .-.-.+++|.|-||||.-+-.
T Consensus 55 E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP----~~~RPkL~l~GeSLGa~g~~~ 125 (289)
T PF10081_consen 55 EYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLP----EDRRPKLYLYGESLGAYGGEA 125 (289)
T ss_pred HHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCC----cccCCeEEEeccCccccchhh
Confidence 3667788888888887654432232222222223322 222223331 113457999999999985443
No 221
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=34.21 E-value=49 Score=29.95 Aligned_cols=20 Identities=25% Similarity=0.172 Sum_probs=16.6
Q ss_pred EEEEecHHHHHHHHHHhhcc
Q psy15133 63 HLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 63 hlIGhSLGAhIAg~~g~~~~ 82 (229)
.++|||||=..|..++..+.
T Consensus 127 ~~~GHSlGE~aA~~~AG~ls 146 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGALS 146 (343)
T ss_pred eeeeccHHHHHHHHHhCCCC
Confidence 68999999999888886553
No 222
>KOG4389|consensus
Probab=33.24 E-value=55 Score=32.14 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=40.5
Q ss_pred ccCCeEEEEEcCCCCCCCcc----hhhcccChHHHHHHHHHHHHHHhcC--CCCCCCCceEEEEecHHHH
Q psy15133 9 HKGDYNVIVVDYGSLVVVPC----IDQISWSPSFAGACIAQLAYYLSQH--PRGVPPEKLHLLGWSIGAH 72 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~----y~~a~~~~~~vg~~la~~i~~L~~~--~~~~~~~~ihlIGhSLGAh 72 (229)
.++++=|+.+.++-++-..- -+.+..|+...-++|| |+++.++ ..|=++++|.|.|-|-||.
T Consensus 163 ~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLA--l~WV~~Ni~aFGGnp~~vTLFGESAGaA 230 (601)
T KOG4389|consen 163 AVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLA--LQWVQENIAAFGGNPSRVTLFGESAGAA 230 (601)
T ss_pred eeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHH--HHHHHHhHHHhCCCcceEEEeccccchh
Confidence 34555555556665553322 2367778888888887 4555422 3377999999999999974
No 223
>KOG1283|consensus
Probab=32.92 E-value=86 Score=29.27 Aligned_cols=75 Identities=12% Similarity=0.029 Sum_probs=54.3
Q ss_pred ccccccCCeEEEEEcCCCCCCCcchh----hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhh
Q psy15133 5 IAYFHKGDYNVIVVDYGSLVVVPCID----QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANY 80 (229)
Q Consensus 5 ~a~l~~~d~nVI~vDw~~~a~~~~y~----~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~ 80 (229)
-.+|+ +.+++.||-+.++-.. |. ....+...+|.++.++++.+......+....+||+--|-||.+|-..|+.
T Consensus 66 ~TWlk--~adllfvDnPVGaGfS-yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 66 WTWLK--DADLLFVDNPVGAGFS-YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred chhhh--hccEEEecCCCcCcee-eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 34454 4679999998876432 21 12335678899999998887633346677789999999999999998887
Q ss_pred cc
Q psy15133 81 VE 82 (229)
Q Consensus 81 ~~ 82 (229)
+-
T Consensus 143 l~ 144 (414)
T KOG1283|consen 143 LD 144 (414)
T ss_pred HH
Confidence 64
No 224
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=32.58 E-value=68 Score=30.43 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 42 CIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 42 ~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
.-.-+++.|. +.++.++ .++|-|.||.||..++..-
T Consensus 87 ~hiGVLkaL~--E~gl~p~--vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 87 FHIGVLKALF--EANLLPR--IISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHHHHH--HcCCCCC--EEEEECHHHHHHHHHHcCC
Confidence 3344567775 3466664 7999999999999888753
No 225
>COG3675 Predicted lipase [Lipid metabolism]
Probab=32.46 E-value=19 Score=32.81 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=20.2
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-.+-++|||.|+.|++..|-++.
T Consensus 175 Yrig~tghS~g~aii~vrGtyfe 197 (332)
T COG3675 175 YRIGITGHSSGGAIICVRGTYFE 197 (332)
T ss_pred eEEEEEeecCCccEEEEeccchh
Confidence 45789999999999999999665
No 226
>KOG2281|consensus
Probab=32.22 E-value=60 Score=32.97 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=47.9
Q ss_pred ccccccccCCeEEEEEcCCCCCCCcchhhcc--cC--hHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHH
Q psy15133 3 RPIAYFHKGDYNVIVVDYGSLVVVPCIDQIS--WS--PSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTA 78 (229)
Q Consensus 3 ~~~a~l~~~d~nVI~vDw~~~a~~~~y~~a~--~~--~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g 78 (229)
+|=.+|...+|-|+++|-++-+.-.--.... .+ .-.+-+++-. +++|.+...-+++++|-+-|+|-||.++...-
T Consensus 667 lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeg-lq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L 745 (867)
T KOG2281|consen 667 LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEG-LQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGL 745 (867)
T ss_pred hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHH-HHHHHHhcCcccchheeEeccccccHHHHHHh
Confidence 4455677789999999998876532111100 00 0112222222 34444222356899999999999999998766
Q ss_pred hhcc
Q psy15133 79 NYVE 82 (229)
Q Consensus 79 ~~~~ 82 (229)
.+.|
T Consensus 746 ~~~P 749 (867)
T KOG2281|consen 746 AQYP 749 (867)
T ss_pred hcCc
Confidence 5655
No 227
>PF03283 PAE: Pectinacetylesterase
Probab=31.83 E-value=74 Score=29.55 Aligned_cols=55 Identities=25% Similarity=0.329 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCCCC-CCCceEEEEecHHHHHHHHHHhhcccCCccc---cccccCCccccccC
Q psy15133 44 AQLAYYLSQHPRGV-PPEKLHLLGWSIGAHIAGLTANYVEKGRKLG---RITGLDPTIIFYQT 102 (229)
Q Consensus 44 a~~i~~L~~~~~~~-~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~---rIt~LDPAgp~f~~ 102 (229)
..+|+.|.. .++ ..++|.|-|.|-||--+.+-...+. ++++ ++.+|.=+|.+++.
T Consensus 141 ~avl~~l~~--~gl~~a~~vlltG~SAGG~g~~~~~d~~~--~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 141 RAVLDDLLS--NGLPNAKQVLLTGCSAGGLGAILHADYVR--DRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHH--hcCcccceEEEeccChHHHHHHHHHHHHH--HHhccCceEEEeccccccccc
Confidence 345566652 233 4789999999999998887776665 4444 67777777777654
No 228
>KOG3043|consensus
Probab=31.04 E-value=42 Score=29.53 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=42.1
Q ss_pred ccCCeEEEEEcCCCC---C---CCcchh--hcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHH
Q psy15133 9 HKGDYNVIVVDYGSL---V---VVPCID--QISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAG 75 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~---a---~~~~y~--~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg 75 (229)
.-.+|+|++.|+-++ . ....++ .-..+.+..-+.+..+++.|.. .-...+|=++|+.+||-++=
T Consensus 64 A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~---~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 64 ALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN---HGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred hcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH---cCCcceeeEEEEeecceEEE
Confidence 346899999997554 1 111111 1123344566888899999962 22468999999999997653
No 229
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=30.04 E-value=83 Score=30.95 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=18.6
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
|+.++ .++|||||=..|..++..+
T Consensus 263 GI~Pd--av~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIKPD--FALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCC--EEeecCHHHHHHHHHhCCC
Confidence 55544 8999999988888777665
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=29.94 E-value=73 Score=30.64 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcc
Q psy15133 55 RGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTI 97 (229)
Q Consensus 55 ~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAg 97 (229)
.+..++.-+..|.|-||.-+..+++++| +-..-|++-.||-
T Consensus 110 Yg~~p~~sY~~GcS~GGRqgl~~AQryP--~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 110 YGKAPKYSYFSGCSTGGRQGLMAAQRYP--EDFDGILAGAPAI 150 (474)
T ss_pred hCCCCCceEEEEeCCCcchHHHHHHhCh--hhcCeEEeCCchH
Confidence 4778999999999999999999999998 8889999999994
No 231
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.57 E-value=1.3e+02 Score=25.31 Aligned_cols=34 Identities=32% Similarity=0.328 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+-+++.|. +.++.++ .++|-|.||-+|..++...
T Consensus 14 ~Gvl~aL~--e~g~~~d--~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 14 AGVLKALA--EAGIEPD--IISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHH--HcCCCCC--EEEEECHHHHHHHHHHcCC
Confidence 44567775 3455433 8999999999999888754
No 232
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=27.77 E-value=1.3e+02 Score=24.42 Aligned_cols=34 Identities=26% Similarity=0.111 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+.+++.|. +.++.+ =.++|=|.||.+|..++...
T Consensus 15 ~Gvl~~L~--e~~~~~--d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 15 IGALKALE--EAGILK--KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHH--HcCCCc--ceEEEECHHHHHHHHHHcCC
Confidence 45667775 235544 58899999999999888654
No 233
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=27.60 E-value=82 Score=25.34 Aligned_cols=35 Identities=31% Similarity=0.219 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+-+++.|. +.++. --.++|-|.||.+|..++...+
T Consensus 14 ~Gvl~aL~--e~gi~--~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALR--ERGPL--IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHH--HcCCC--CCEEEEECHHHHHHHHHHcCCC
Confidence 44567775 23444 5588999999999999987654
No 234
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=27.46 E-value=1.5e+02 Score=25.42 Aligned_cols=37 Identities=27% Similarity=0.177 Sum_probs=27.0
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 43 IAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 43 la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
-+-+++.|. +.++.++--.++|-|.||-+|..++...
T Consensus 14 h~GVl~~L~--e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 14 HLGVLSLLI--EAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHH--HcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 344567775 3466655668999999999998887654
No 235
>KOG2100|consensus
Probab=27.30 E-value=1.6e+02 Score=30.08 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=50.1
Q ss_pred cccCCeEEEEEcCCCCCCCc-chh-hcccCh--HHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhccc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVP-CID-QISWSP--SFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEK 83 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~-~y~-~a~~~~--~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~ 83 (229)
....++-|+.||-++-+... -+. ....+. ..|-+++.. ++.+.+ ..-++.+++-|.|+|-||.++..+-..-+
T Consensus 554 ~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~-~~~~~~-~~~iD~~ri~i~GwSyGGy~t~~~l~~~~- 630 (755)
T KOG2100|consen 554 VSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEA-VKKVLK-LPFIDRSRVAIWGWSYGGYLTLKLLESDP- 630 (755)
T ss_pred hccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHH-HHHHHh-cccccHHHeEEeccChHHHHHHHHhhhCc-
Confidence 45677888889987765332 111 111111 122233222 233321 23789999999999999999988766643
Q ss_pred CCccccc-cccCCc
Q psy15133 84 GRKLGRI-TGLDPT 96 (229)
Q Consensus 84 ~~~v~rI-t~LDPA 96 (229)
+++-+- +++.|.
T Consensus 631 -~~~fkcgvavaPV 643 (755)
T KOG2100|consen 631 -GDVFKCGVAVAPV 643 (755)
T ss_pred -CceEEEEEEecce
Confidence 444444 677775
No 236
>PRK07877 hypothetical protein; Provisional
Probab=26.10 E-value=62 Score=33.00 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=30.1
Q ss_pred CCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCccc
Q psy15133 58 PPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTII 98 (229)
Q Consensus 58 ~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp 98 (229)
.-.+|-|||-++|+++|-++++. +-+++|+..|.--.
T Consensus 106 ~~~~V~IvG~GlGs~~a~~Lara----GvvG~l~lvD~D~v 142 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAE----GLCGELRLADFDTL 142 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHc----cCCCeEEEEcCCEE
Confidence 45789999999999999998866 22489999987644
No 237
>KOG3967|consensus
Probab=26.07 E-value=58 Score=28.77 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=32.5
Q ss_pred CCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCc
Q psy15133 56 GVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 56 ~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
....+++.++.||-||-....+-.+++..++|-.|-.-|.+
T Consensus 186 pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 186 PAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred ccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 45789999999999999998888888744566666666665
No 238
>KOG2551|consensus
Probab=23.48 E-value=43 Score=29.30 Aligned_cols=17 Identities=53% Similarity=0.716 Sum_probs=15.3
Q ss_pred EEEEecHHHHHHHHHHh
Q psy15133 63 HLLGWSIGAHIAGLTAN 79 (229)
Q Consensus 63 hlIGhSLGAhIAg~~g~ 79 (229)
=|||||=||.+|+.++.
T Consensus 107 GllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAG 123 (230)
T ss_pred cccccchhHHHHHHhhc
Confidence 37999999999999887
No 239
>KOG1202|consensus
Probab=23.34 E-value=1.2e+02 Score=33.33 Aligned_cols=53 Identities=21% Similarity=0.222 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccccccCCcccc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIF 99 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~ 99 (229)
+-+|+.+. +-.+....+|+|.|.|+-++-..+..++..+-...++.||-+.-.
T Consensus 2169 ~~yirqir---kvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2169 AYYIRQIR---KVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred HHHHHHHH---hcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 44566664 233566899999999999999999888722234448899988543
No 240
>KOG2183|consensus
Probab=23.29 E-value=1.7e+02 Score=28.28 Aligned_cols=41 Identities=20% Similarity=0.154 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 41 ACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 41 ~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
++.|++|.+|.+ ..+..-..|..+|-|-||.+|...=..+|
T Consensus 149 ADfA~ll~~lK~-~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 149 ADFAELLTFLKR-DLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred HHHHHHHHHHhh-ccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 456888898973 34666778999999999998877655554
No 241
>PRK12467 peptide synthase; Provisional
Probab=22.76 E-value=1.8e+02 Score=35.40 Aligned_cols=82 Identities=22% Similarity=0.254 Sum_probs=50.4
Q ss_pred CeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc-cCCccccc
Q psy15133 12 DYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE-KGRKLGRI 90 (229)
Q Consensus 12 d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~-~~~~v~rI 90 (229)
+..|+.+.......... .....+.++...++.+.... .....++.|+|+||.+|-.+++.+. .++.+.-+
T Consensus 3718 ~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~------~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~ 3788 (3956)
T PRK12467 3718 DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQ------AKGPYGLLGWSLGGTLARLVAELLEREGESEAFL 3788 (3956)
T ss_pred CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhc------cCCCeeeeeeecchHHHHHHHHHHHHcCCceeEE
Confidence 45666665544432221 11123444555555555553 3346899999999999999888776 45666666
Q ss_pred cccCCccccccC
Q psy15133 91 TGLDPTIIFYQT 102 (229)
Q Consensus 91 t~LDPAgp~f~~ 102 (229)
..+|...|.+..
T Consensus 3789 ~~~~~~~~~~~~ 3800 (3956)
T PRK12467 3789 GLFDNTLPLPDE 3800 (3956)
T ss_pred EEEecccccccc
Confidence 667777776643
No 242
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.52 E-value=1.2e+02 Score=28.66 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcccCCccccc
Q psy15133 42 CIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVEKGRKLGRI 90 (229)
Q Consensus 42 ~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~~~~~v~rI 90 (229)
.-+-.++.|. +.++.++ .++|-|.||.||..++..-+ +.+.++
T Consensus 81 ~h~GVlkaL~--e~gllp~--iI~GtSAGAivaalla~~t~--~el~~~ 123 (407)
T cd07232 81 YHFGVVKALL--DADLLPN--VISGTSGGSLVAALLCTRTD--EELKQL 123 (407)
T ss_pred HHHHHHHHHH--hCCCCCC--EEEEECHHHHHHHHHHcCCH--HHHHHH
Confidence 3344566775 3455543 49999999999999997533 455444
No 243
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=22.26 E-value=1.3e+02 Score=25.35 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=43.9
Q ss_pred CCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecH----HHHHHHHHHhhcccCCc
Q psy15133 11 GDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSI----GAHIAGLTANYVEKGRK 86 (229)
Q Consensus 11 ~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSL----GAhIAg~~g~~~~~~~~ 86 (229)
+--.|+.+|-..... ++...+++.|+++++.. + -++.|+|||. |..+++.+|.++. -.-
T Consensus 76 G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~-------~-p~lVL~~~t~~~~~grdlaprlAarLg-a~l 138 (202)
T cd01714 76 GADRAILVSDRAFAG--------ADTLATAKALAAAIKKI-------G-VDLILTGKQSIDGDTGQVGPLLAELLG-WPQ 138 (202)
T ss_pred CCCEEEEEecccccC--------CChHHHHHHHHHHHHHh-------C-CCEEEEcCCcccCCcCcHHHHHHHHhC-CCc
Confidence 334566665544332 23455666777766544 3 3699999998 8899999999886 345
Q ss_pred cccccccC
Q psy15133 87 LGRITGLD 94 (229)
Q Consensus 87 v~rIt~LD 94 (229)
+.-.+.|+
T Consensus 139 vsdv~~l~ 146 (202)
T cd01714 139 ITYVSKIE 146 (202)
T ss_pred cceEEEEE
Confidence 66666664
No 244
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=22.08 E-value=1.7e+02 Score=27.90 Aligned_cols=23 Identities=26% Similarity=0.186 Sum_probs=20.7
Q ss_pred CceEEEEecHHHHHHHHHHhhcc
Q psy15133 60 EKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 60 ~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
-++.++|+|-||.+|-.+++--|
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP 206 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAP 206 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCc
Confidence 37889999999999999998876
No 245
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.95 E-value=1.5e+02 Score=27.37 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=24.0
Q ss_pred HHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 45 QLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 45 ~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
-.++.|. +.++.++ .+.|-|.||.||+.++...
T Consensus 85 GVlkaL~--e~gl~p~--~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 85 GVVRTLV--EHQLLPR--VIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHH--HcCCCCC--EEEEECHHHHHHHHHHcCC
Confidence 3456665 3466554 5999999999999998753
No 246
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=21.60 E-value=1.9e+02 Score=23.23 Aligned_cols=34 Identities=26% Similarity=0.196 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+-+++.|. +.++.+ =.++|-|.||.+|..++...
T Consensus 16 ~Gvl~~L~--e~g~~~--d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 16 IGVLRALE--EEGIEI--DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHH--HCCCCe--eEEEEeCHHHHHHHHHHcCC
Confidence 44567775 235543 37899999999998887654
No 247
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.34 E-value=98 Score=29.78 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=40.0
Q ss_pred ccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 9 HKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 9 ~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
+...+.|++||-.+--... . +.+.+ +..+ ..-+.|+.+-+|=-+|=||-|...|+.|.
T Consensus 179 k~~~~DvvIvDTAGRl~id---e---------~Lm~E-l~~I---k~~~~P~E~llVvDam~GQdA~~~A~aF~ 236 (451)
T COG0541 179 KEEGYDVVIVDTAGRLHID---E---------ELMDE-LKEI---KEVINPDETLLVVDAMIGQDAVNTAKAFN 236 (451)
T ss_pred HHcCCCEEEEeCCCccccc---H---------HHHHH-HHHH---HhhcCCCeEEEEEecccchHHHHHHHHHh
Confidence 4566899999986543221 0 11122 2222 23668999999999999999999999987
No 248
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=21.27 E-value=1.6e+02 Score=26.01 Aligned_cols=41 Identities=32% Similarity=0.384 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhc
Q psy15133 39 AGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 39 vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~ 81 (229)
+.+.|.....+|.++ -.+-++|.|+|+|=||.+|=.++..+
T Consensus 73 ~~~~I~~ay~~l~~~--~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKN--YEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhc--cCCcceEEEEecCccHHHHHHHHHHH
Confidence 445556666666522 23567899999999999998887665
No 249
>PF15486 DUF4644: Domain of unknown function (DUF4644)
Probab=21.24 E-value=81 Score=25.69 Aligned_cols=61 Identities=21% Similarity=0.300 Sum_probs=41.4
Q ss_pred CCCcceeec----C-CcCCCCCCCCCc--cccccccccchHHHHHhhhcCCCCeEEeeCCChh--hhhcCCCCC
Q psy15133 133 SGHADYYVN----G-GTSQPGCGSFSI--IEQLSCDHTKVTPYFIESINTKRGFWAAPCPNRF--YYNLGWCDS 197 (229)
Q Consensus 133 ~Gh~DfypN----g-G~~QPgC~~~~~--~~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~--~~~~~~C~~ 197 (229)
-||.|.=|| | |..|+-|..... -+.+.=-|.|...+|..+=.. .|-+|+|.. .+..+.|..
T Consensus 10 p~h~d~PpnIYEGGLGaqq~qCps~qGSKPKNFRLRHLrgLalYLpghmq----pagQceSHwlgrLmag~Clp 79 (161)
T PF15486_consen 10 PSHPDTPPNIYEGGLGAQQQQCPSAQGSKPKNFRLRHLRGLALYLPGHMQ----PAGQCESHWLGRLMAGGCLP 79 (161)
T ss_pred CCCCCCCcchhcccccccCCCCCCCCCCCCcchhhHhhhhhhhhccCCCC----cccchhHHHHHHHHhCCCCC
Confidence 456666666 5 688999986431 122345799999988766433 677898854 457788886
No 250
>KOG0780|consensus
Probab=20.78 E-value=1.3e+02 Score=28.91 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=38.2
Q ss_pred cccCCeEEEEEcCCCCCCCcchhhcccChHHHHHHHHHHHHHHhcCCCCCCCCceEEEEecHHHHHHHHHHhhcc
Q psy15133 8 FHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIAGLTANYVE 82 (229)
Q Consensus 8 l~~~d~nVI~vDw~~~a~~~~y~~a~~~~~~vg~~la~~i~~L~~~~~~~~~~~ihlIGhSLGAhIAg~~g~~~~ 82 (229)
++++++.||+||-++--... + ....++++- .+.+.|+++.+|=-+.=||-|-.-++.|+
T Consensus 179 fKke~fdvIIvDTSGRh~qe-~-----------sLfeEM~~v----~~ai~Pd~vi~VmDasiGQaae~Qa~aFk 237 (483)
T KOG0780|consen 179 FKKENFDVIIVDTSGRHKQE-A-----------SLFEEMKQV----SKAIKPDEIIFVMDASIGQAAEAQARAFK 237 (483)
T ss_pred HHhcCCcEEEEeCCCchhhh-H-----------HHHHHHHHH----HhhcCCCeEEEEEeccccHhHHHHHHHHH
Confidence 35789999999998654332 0 112222221 23667888888777777777777777776
No 251
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=20.34 E-value=1.1e+02 Score=23.64 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=25.4
Q ss_pred ceEEEEec-HHHHHHHHHHhhcccCCccccccccCCccccc
Q psy15133 61 KLHLLGWS-IGAHIAGLTANYVEKGRKLGRITGLDPTIIFY 100 (229)
Q Consensus 61 ~ihlIGhS-LGAhIAg~~g~~~~~~~~v~rIt~LDPAgp~f 100 (229)
++.|||-. +|+.++-.+++. -+++|+.+|+-..-.
T Consensus 1 ~VliiG~GglGs~ia~~L~~~-----Gv~~i~ivD~d~v~~ 36 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARS-----GVGKITLIDFDTVEL 36 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHC-----CCCEEEEEcCCCcCc
Confidence 46778876 788877777654 368999999885443
No 252
>cd04479 RPA3 RPA3: A subfamily of OB folds similar to human RPA3 (also called RPA14). RPA3 is the smallest subunit of Replication protein A (RPA). RPA is a nuclear ssDNA binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). RPA3 is believed to have a structural role in assembly of the RPA heterotrimer.
Probab=20.19 E-value=1.2e+02 Score=22.66 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhcccCCccccccccCCc
Q psy15133 70 GAHIAGLTANYVEKGRKLGRITGLDPT 96 (229)
Q Consensus 70 GAhIAg~~g~~~~~~~~v~rIt~LDPA 96 (229)
|+++..+.|+... -|++++.+|+.
T Consensus 7 ~~~L~~f~gk~V~---ivGkV~~~~~~ 30 (101)
T cd04479 7 GAMLSQFVGKTVR---IVGKVEKVDGD 30 (101)
T ss_pred HHHHHhhCCCEEE---EEEEEEEecCC
Confidence 5677777777663 67888888876
No 253
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.03 E-value=1.9e+02 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.115 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCCCCCce-EEEEecHHHHHHHHHHhhc
Q psy15133 44 AQLAYYLSQHPRGVPPEKL-HLLGWSIGAHIAGLTANYV 81 (229)
Q Consensus 44 a~~i~~L~~~~~~~~~~~i-hlIGhSLGAhIAg~~g~~~ 81 (229)
+-+++.|. +.++. ++ +++|-|.||-+|..++...
T Consensus 14 ~Gvl~al~--e~~~~--~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 14 AGVLDAFL--EAGIR--PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHH--HcCCC--CCCEEEEECHHHHhHHHHHhCC
Confidence 55567775 23443 35 8899999999998876554
Done!