RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15133
(229 letters)
>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Dog (Canis familiaris) [TaxId: 9615]}
Length = 337
Score = 163 bits (414), Expect = 7e-50
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 25/233 (10%)
Query: 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLL 65
F + N I VD+ Q + + GA +AQ+ LS + P ++ L+
Sbjct: 94 NMFKVEEVNCICVDWKKGSQ-TSYTQAANNVRVVGAQVAQMLSMLSAN-YSYSPSQVQLI 151
Query: 66 GWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAAG 125
G S+GAH+AG + LGRITGLDP +Q + LD TDA FVDVIHT A
Sbjct: 152 GHSLGAHVAGEAGSRT---PGLGRITGLDPVEASFQGTPEEVRLDPTDADFVDVIHTDAA 208
Query: 126 VL------GQWGPSGHADYYVNGGTSQPGCGSFSI-------------IEQLSCDHTKVT 166
L G GH D++ NGG PGC ++ + ++C+H +
Sbjct: 209 PLIPFLGFGTSQQMGHLDFFPNGGEEMPGCKKNALSQIVDLDGIWEGTRDFVACNHLRSY 268
Query: 167 PYFIESINTKRGFWAAPCPNRFYYNLGWCDS-PETQYVEMGERANPNSLIPYP 218
Y+ ESI GF + PC + + C P+ +MG A+ ++
Sbjct: 269 KYYSESILNPDGFASYPCASYRAFESNKCFPCPDQGCPQMGHYADKFAVKTSD 321
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 338
Score = 161 bits (409), Expect = 4e-49
Identities = 70/233 (30%), Positives = 96/233 (41%), Gaps = 24/233 (10%)
Query: 6 AYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLL 65
F N I VD+ Q S++ GA IA L LS G PE +HL+
Sbjct: 94 KMFQVEKVNCICVDWRRGSRTEYT-QASYNTRVVGAEIAFLVQVLSTE-MGYSPENVHLI 151
Query: 66 GWSIGAHIAGLTANYVEKGRKLGRITGLDPTIIFYQTNNKTKDLDSTDALFVDVIHTAAG 125
G S+GAH+ G + +GRITGLDP +Q + LD +DA+FVDVIHT +
Sbjct: 152 GHSLGAHVVGEAGRRL--EGHVGRITGLDPAEPCFQGLPEEVRLDPSDAMFVDVIHTDSA 209
Query: 126 VL------GQWGPSGHADYYVNGGTSQPGCG-------------SFSIIEQLSCDHTKVT 166
+ G GH D++ NGG PGC ++C+H +
Sbjct: 210 PIIPYLGFGMSQKVGHLDFFPNGGKEMPGCQKNILSTIVDINGIWEGTQNFVACNHLRSY 269
Query: 167 PYFIESINTKRGFWAAPCPNRFYYNLGWCDS-PETQYVEMGERANPNSLIPYP 218
Y+ SI GF PC + + C PE +MG A+
Sbjct: 270 KYYASSILNPDGFLGYPCSSYEKFQQNDCFPCPEEGCPKMGHYADQFEGKTAT 322
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 30.7 bits (68), Expect = 0.11
Identities = 10/78 (12%), Positives = 20/78 (25%), Gaps = 10/78 (12%)
Query: 5 IAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYL---SQHPRGVPPEK 61
Y ++V D S S + L + +
Sbjct: 52 AEYLSTNGFHVFRYDSLH-------HVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQN 104
Query: 62 LHLLGWSIGAHIAGLTAN 79
+ L+ S+ A +A +
Sbjct: 105 IGLIAASLSARVAYEVIS 122
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 27.0 bits (59), Expect = 2.0
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 12/92 (13%)
Query: 5 IAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHL 64
I + Y + + + + ++ G KL +
Sbjct: 53 IPLSTQLGYTPCWISPPP-----------FMLNDTQVNTEYMVNAITALYAGSGNNKLPV 101
Query: 65 LGWSIGAHIAGLTANYV-EKGRKLGRITGLDP 95
L WS G +A + K+ R+ P
Sbjct: 102 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAP 133
>d3e11a1 d.92.1.17 (A:1-113) Uncharacterized protein Acel_2062
{Acidothermus cellulolyticus [TaxId: 28049]}
Length = 113
Score = 26.2 bits (58), Expect = 2.0
Identities = 7/25 (28%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
Query: 43 IAQLAYYLSQHPRGVPPEKLHLLGW 67
+ ++A++ G+ E+LH LG+
Sbjct: 94 VHEIAHHF-----GIDDERLHELGY 113
>d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei
[TaxId: 51453]}
Length = 207
Score = 26.6 bits (58), Expect = 2.3
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 15 VIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKLHLLGWSIGAHIA 74
+ Y + IS++ S A ++ P +L L+G+S GA I
Sbjct: 38 SEAIVYPACGGQASCGGISYANSVVNG-TNAAAAAINNFHNSCPDTQLVLVGYSQGAQIF 96
Query: 75 GLTANYVEKGRKLGRITGLD 94
+ T +
Sbjct: 97 DNALCGGGDPGEGITNTAVP 116
>d2hqxa1 b.34.9.1 (A:8-97) P100 co-activator, SND1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 90
Score = 23.7 bits (51), Expect = 8.8
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 5 IAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLA 47
+V +DYG+ V+P + SP+F+ + A
Sbjct: 47 EKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQA 89
>d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase
{Saccharopolyspora erythraea [TaxId: 1836]}
Length = 255
Score = 24.7 bits (53), Expect = 9.3
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 3 RPIAYFHKGDYNVIVVDYGSLVVVPCIDQISWSPSFAGACIAQLAYYLSQHPRGVPPEKL 62
+A +G V V P ++ PS A A A + + P
Sbjct: 61 TRLAGALRGIAPVRAVPQ------PGYEEGEPLPSSMAAVAAVQADAVIRTQGDKP---F 111
Query: 63 HLLGWSIGAHIAGLTAN-YVEKGRKLGRITGLDP 95
+ G S GA +A A +++G + +D
Sbjct: 112 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDV 145
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.445
Gapped
Lambda K H
0.267 0.0456 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 930,009
Number of extensions: 43435
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 17
Length of query: 229
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 147
Effective length of database: 1,281,736
Effective search space: 188415192
Effective search space used: 188415192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.1 bits)