Your job contains 1 sequence.
>psy15134
MSEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQ
IFVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEA
IPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM
GPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKFSR
FFFPFSFFVLNILYWTSFL
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15134
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037950 - symbol:HisCl1 "Histamine-gated chloride ... 703 2.6e-96 2
FB|FBgn0003011 - symbol:ort "ora transientless" species:7... 400 2.6e-63 3
MGI|MGI:95750 - symbol:Glra4 "glycine receptor, alpha 4 s... 339 1.5e-43 3
UNIPROTKB|F1RYC5 - symbol:LOC100525376 "Uncharacterized p... 339 3.0e-43 3
UNIPROTKB|E1BHI1 - symbol:GLRA4 "Uncharacterized protein"... 339 6.2e-43 3
UNIPROTKB|F1PC16 - symbol:GLRA1 "Uncharacterized protein"... 334 7.9e-43 3
MGI|MGI:95747 - symbol:Glra1 "glycine receptor, alpha 1 s... 334 7.9e-43 3
RGD|2704 - symbol:Glra1 "glycine receptor, alpha 1" speci... 334 1.0e-42 3
UNIPROTKB|P57695 - symbol:GLRA1 "Glycine receptor subunit... 334 2.6e-42 3
UNIPROTKB|P23415 - symbol:GLRA1 "Glycine receptor subunit... 334 2.6e-42 3
UNIPROTKB|Q14C71 - symbol:GLRA1 "GLRA1 protein" species:9... 334 2.6e-42 3
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 334 3.3e-42 3
UNIPROTKB|E9PT06 - symbol:Glra1 "Glycine receptor subunit... 334 2.3e-41 3
ZFIN|ZDB-GENE-020402-2 - symbol:glra4b "glycine receptor,... 334 3.2e-41 3
UNIPROTKB|Q5JXX5 - symbol:GLRA4 "Glycine receptor subunit... 338 2.2e-40 2
UNIPROTKB|E2RCM7 - symbol:GLRA4 "Uncharacterized protein"... 341 2.8e-40 2
ZFIN|ZDB-GENE-010410-3 - symbol:glra4a "glycine receptor,... 339 3.6e-40 2
RGD|1564103 - symbol:Glra4 "glycine receptor, alpha 4" sp... 339 4.6e-40 2
UNIPROTKB|F1NEM1 - symbol:GLRA4 "Uncharacterized protein"... 338 5.8e-40 2
UNIPROTKB|F1NMN1 - symbol:GLRA3 "Uncharacterized protein"... 338 5.8e-40 2
WB|WBGene00008022 - symbol:lgc-41 species:6239 "Caenorhab... 291 2.3e-39 4
UNIPROTKB|Q8N1C3 - symbol:GABRG1 "Gamma-aminobutyric acid... 313 2.9e-39 3
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 341 4.0e-39 2
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 341 4.0e-39 2
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 341 4.0e-39 2
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 341 4.0e-39 2
UNIPROTKB|F1SQV0 - symbol:GLRA2 "Uncharacterized protein"... 341 4.0e-39 2
UNIPROTKB|K7GSI6 - symbol:GLRA2 "Uncharacterized protein"... 341 4.0e-39 2
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 341 4.0e-39 2
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 341 4.0e-39 2
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 341 4.0e-39 2
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 341 6.5e-39 2
UNIPROTKB|F1S3S9 - symbol:GABRG1 "Uncharacterized protein... 300 4.4e-38 3
WB|WBGene00001587 - symbol:ggr-2 species:6239 "Caenorhabd... 298 9.5e-38 3
UNIPROTKB|F1NID8 - symbol:GABRG2 "Gamma-aminobutyric acid... 291 3.4e-37 3
UNIPROTKB|F1NVG2 - symbol:GABRG2 "Gamma-aminobutyric acid... 291 5.3e-37 3
UNIPROTKB|A8MWU7 - symbol:GABRG2 "cDNA FLJ59748, highly s... 286 5.3e-37 3
UNIPROTKB|P21548 - symbol:GABRG2 "Gamma-aminobutyric acid... 294 8.5e-37 3
FB|FBgn0024963 - symbol:GluClalpha "GluClalpha" species:7... 299 1.4e-36 3
UNIPROTKB|F1NES8 - symbol:GABRE "Uncharacterized protein"... 285 1.4e-36 3
MGI|MGI:103156 - symbol:Gabrg1 "gamma-aminobutyric acid (... 295 1.5e-36 3
UNIPROTKB|E2RSQ0 - symbol:GABRG2 "Uncharacterized protein... 289 1.5e-36 3
WB|WBGene00021437 - symbol:lgc-42 species:6239 "Caenorhab... 324 1.7e-36 2
WB|WBGene00001586 - symbol:ggr-1 species:6239 "Caenorhabd... 288 1.8e-36 3
UNIPROTKB|E2RH22 - symbol:GABRG1 "Uncharacterized protein... 293 1.8e-36 3
ZFIN|ZDB-GENE-091118-65 - symbol:gabrg2 "gamma-aminobutyr... 288 2.5e-36 3
UNIPROTKB|G1K310 - symbol:GABRE "Uncharacterized protein"... 285 2.5e-36 3
UNIPROTKB|F1M4V9 - symbol:Gabrg2 "Gamma-aminobutyric acid... 286 2.6e-36 3
MGI|MGI:95623 - symbol:Gabrg2 "gamma-aminobutyric acid (G... 289 3.7e-36 3
UNIPROTKB|Q6PW52 - symbol:Gabrg2 "GABA-A gamma2 long isof... 289 3.7e-36 3
UNIPROTKB|F1MIG7 - symbol:GABRG2 "Gamma-aminobutyric acid... 288 5.0e-36 3
UNIPROTKB|P22300 - symbol:GABRG2 "Gamma-aminobutyric acid... 288 5.0e-36 3
UNIPROTKB|P34904 - symbol:GABRG4 "Gamma-aminobutyric acid... 285 6.0e-36 3
RGD|621732 - symbol:Gabrg1 "gamma-aminobutyric acid (GABA... 290 6.3e-36 3
RGD|61966 - symbol:Gabrg2 "gamma-aminobutyric acid (GABA)... 286 6.5e-36 3
UNIPROTKB|P18507 - symbol:GABRG2 "Gamma-aminobutyric acid... 286 6.7e-36 3
UNIPROTKB|G3MYR4 - symbol:GABRG2 "Gamma-aminobutyric acid... 285 8.9e-36 3
UNIPROTKB|F1RR72 - symbol:GABRG2 "Uncharacterized protein... 285 8.9e-36 3
UNIPROTKB|Q7LZ70 - symbol:GABRG1 "Uncharacterized protein... 289 1.1e-35 3
UNIPROTKB|F5HB82 - symbol:GABRG2 "Gamma-aminobutyric acid... 289 1.2e-35 3
UNIPROTKB|E1C779 - symbol:GABRG3 "Uncharacterized protein... 295 1.6e-35 3
UNIPROTKB|Q99928 - symbol:GABRG3 "Gamma-aminobutyric acid... 291 9.1e-35 3
UNIPROTKB|F1NH12 - symbol:GLRA1 "Uncharacterized protein"... 338 1.0e-34 2
WB|WBGene00000232 - symbol:avr-14 species:6239 "Caenorhab... 315 1.3e-34 2
WB|WBGene00001593 - symbol:glc-3 species:6239 "Caenorhabd... 308 1.5e-34 2
WB|WBGene00000233 - symbol:avr-15 species:6239 "Caenorhab... 315 3.3e-34 2
WB|WBGene00020767 - symbol:lgc-40 species:6239 "Caenorhab... 285 4.7e-34 3
UNIPROTKB|F6Q4V7 - symbol:GABRG1 "Uncharacterized protein... 287 5.6e-34 2
WB|WBGene00001512 - symbol:gab-1 species:6239 "Caenorhabd... 302 8.1e-34 3
ZFIN|ZDB-GENE-010410-2 - symbol:glrba "gylcine receptor, ... 307 9.6e-34 2
UNIPROTKB|I3L720 - symbol:GABRA2 "Uncharacterized protein... 250 1.8e-33 3
ZFIN|ZDB-GENE-111215-5 - symbol:gabrb2l "gamma-aminobutyr... 296 4.9e-33 2
UNIPROTKB|G5E635 - symbol:GABRR2 "Gamma-aminobutyric acid... 276 5.0e-33 3
ZFIN|ZDB-GENE-991117-1 - symbol:glra1 "glycine receptor, ... 336 7.9e-33 2
WB|WBGene00017389 - symbol:lgc-38 species:6239 "Caenorhab... 268 1.2e-32 3
MGI|MGI:95624 - symbol:Gabrg3 "gamma-aminobutyric acid (G... 293 1.3e-32 2
RGD|621735 - symbol:Gabrg3 "gamma-aminobutyric acid (GABA... 293 1.3e-32 2
UNIPROTKB|E7EV50 - symbol:GABRB2 "Gamma-aminobutyric acid... 292 1.3e-32 2
UNIPROTKB|Q9GJS9 - symbol:GLRB "Glycine receptor subunit ... 296 1.9e-32 2
ZFIN|ZDB-GENE-040801-106 - symbol:glrbb "glycine receptor... 299 2.1e-32 2
ZFIN|ZDB-GENE-081105-170 - symbol:gabrd "gamma-aminobutyr... 257 2.4e-32 3
UNIPROTKB|Q90590 - symbol:GABARB "Uncharacterized protein... 290 2.4e-32 2
MGI|MGI:95751 - symbol:Glrb "glycine receptor, beta subun... 295 2.4e-32 2
RGD|2706 - symbol:Glrb "glycine receptor, beta" species:1... 295 2.4e-32 2
UNIPROTKB|E2QS67 - symbol:GLRB "Uncharacterized protein" ... 295 2.5e-32 2
UNIPROTKB|P48167 - symbol:GLRB "Glycine receptor subunit ... 295 2.5e-32 2
UNIPROTKB|E1BW41 - symbol:LOC100858201 "Uncharacterized p... 289 2.6e-32 2
UNIPROTKB|F1PEG2 - symbol:GABRB1 "Uncharacterized protein... 288 3.4e-32 2
UNIPROTKB|F5GXV5 - symbol:GABRB1 "Gamma-aminobutyric acid... 288 3.4e-32 2
UNIPROTKB|P47870 - symbol:GABRB2 "Gamma-aminobutyric acid... 297 4.0e-32 2
UNIPROTKB|F1P037 - symbol:GLRB "Uncharacterized protein" ... 292 4.4e-32 2
UNIPROTKB|E1BFC0 - symbol:GABRB2 "Gamma-aminobutyric acid... 297 4.5e-32 2
ZFIN|ZDB-GENE-090313-230 - symbol:si:dkey-20i10.4 "si:dke... 295 4.9e-32 2
UNIPROTKB|F1PEH3 - symbol:GABRA2 "Uncharacterized protein... 250 5.0e-32 3
MGI|MGI:95620 - symbol:Gabrb2 "gamma-aminobutyric acid (G... 296 5.2e-32 2
UNIPROTKB|F1MAU5 - symbol:GABRB3 "Uncharacterized protein... 286 5.5e-32 2
RGD|61856 - symbol:Gabra2 "gamma-aminobutyric acid (GABA)... 251 6.0e-32 3
UNIPROTKB|F1P9P9 - symbol:GABRA4 "Uncharacterized protein... 261 6.2e-32 3
UNIPROTKB|P47869 - symbol:GABRA2 "Gamma-aminobutyric acid... 250 6.4e-32 3
MGI|MGI:95614 - symbol:Gabra2 "gamma-aminobutyric acid (G... 250 6.4e-32 3
WARNING: Descriptions of 211 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0037950 [details] [associations]
symbol:HisCl1 "Histamine-gated chloride channel subunit 1"
species:7227 "Drosophila melanogaster" [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=ISS]
[GO:0019182 "histamine-gated chloride channel activity"
evidence=NAS] [GO:0019183 "histamine-gated chloride channel
complex" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043052 "thermotaxis"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0043052 HSSP:P23415
InterPro:IPR015680 PANTHER:PTHR18945:SF26 FlyBase:FBgn0037950
EMBL:AF467953 ProteinModelPortal:Q8T9R9 SMR:Q8T9R9 STRING:Q8T9R9
PRIDE:Q8T9R9 InParanoid:Q8T9R9 OrthoDB:EOG41G1KM
ArrayExpress:Q8T9R9 Bgee:Q8T9R9 Uniprot:Q8T9R9
Length = 426
Score = 703 (252.5 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 139/201 (69%), Positives = 160/201 (79%)
Query: 60 QIFVKIKYSI-CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP 118
Q+ + Y+ C GNFTC+A+VFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP
Sbjct: 230 QLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP 289
Query: 119 EAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN 178
EAIPARVT+GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN
Sbjct: 290 EAIPARVTVGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN 349
Query: 179 YMGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKX 238
+MGP+ATKAMKGYS+E++ +++D+ K+ SI PQ Y TFC+G A+YIDK
Sbjct: 350 FMGPVATKAMKGYSDENI-SDLDDLKSALQHHRESIIEPQ---YDTFCHGHATAIYIDKF 405
Query: 239 XXXXXXXXXXVLNILYWTSFL 259
+LNI+YWT+FL
Sbjct: 406 SRFFFPFSFFILNIVYWTTFL 426
Score = 274 (101.5 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 47/66 (71%), Positives = 55/66 (83%)
Query: 1 MSEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQ 60
MSE+YRILDV+WL +IWR DCFFKNAKKVTFHEMSIPNHY+W+YHDKTL YMS T +
Sbjct: 122 MSEQYRILDVDWLHSIWRADCFFKNAKKVTFHEMSIPNHYIWVYHDKTLFYMSKLTLVLW 181
Query: 61 IFVKIK 66
+K +
Sbjct: 182 CALKFE 187
>FB|FBgn0003011 [details] [associations]
symbol:ort "ora transientless" species:7227 "Drosophila
melanogaster" [GO:0019182 "histamine-gated chloride channel
activity" evidence=ISS;NAS] [GO:0019183 "histamine-gated chloride
channel complex" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045472 "response to ether" evidence=IMP]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0009636 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030534 GO:GO:0043052
GO:GO:0045472 eggNOG:NOG295166 InterPro:IPR015680
PANTHER:PTHR18945:SF26 ChiTaRS:oc EMBL:AY672639
ProteinModelPortal:A1KYB3 SMR:A1KYB3 STRING:A1KYB3 PRIDE:A1KYB3
FlyBase:FBgn0003011 InParanoid:A1KYB3 OrthoDB:EOG4F4QSD Bgee:A1KYB3
GO:GO:0019182 Uniprot:A1KYB3
Length = 485
Score = 400 (145.9 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 71/108 (65%), Positives = 92/108 (85%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C GNFTC+ VVF L+RRL Y++F+TYIP+ +IV+MSW+SFWIKPEA PARVTLGV
Sbjct: 214 CTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGV 273
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
TSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS C+VFVF++LME+ ++N
Sbjct: 274 TSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLIN 321
Score = 232 (86.7 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 38/56 (67%), Positives = 48/56 (85%)
Query: 1 MSEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
M++EYR+L+V+WL+N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LYM T
Sbjct: 95 MTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLT 150
Score = 44 (20.5 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 232 ALYIDKXXXXXXXXXXXVLNILYWTSF 258
A+YID+ LN +YW F
Sbjct: 455 AIYIDRSSRVLFPALFASLNGIYWCVF 481
Score = 36 (17.7 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 51 YMSNCTAFIQIFVKIKYSICMNAVL 75
+MS CT F+ ++Y + +N VL
Sbjct: 302 FMSVCTVFV-FMALMEYCL-INIVL 324
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 339 (124.4 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 104 (41.7 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 118 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 176
Score = 44 (20.5 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 16/58 (27%), Positives = 20/58 (34%)
Query: 208 PTRSRSITIPQVPMYPTFCNGREIA-LYIDKXXXXXXXXXXX------VLNILYWTSF 258
P SI PQ P P G + LY+D+ V NI YW +
Sbjct: 388 PMEGSSIYSPQPPT-PLLKEGETMRKLYVDRAKRIDTISRAVFPFTFLVFNIFYWVVY 444
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 339 (124.4 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 233 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 340
Score = 104 (41.7 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 177
Score = 41 (19.5 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 208 PTRSRSITIPQVPMYPTFCNGREIA-LYIDKXXXXXXXXXXX------VLNILYWTSF 258
P I PQ P+ P G + LY+D+ + NI YW +
Sbjct: 389 PIEGSGIYSPQPPV-PLLREGETLRKLYVDQAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 339 (124.4 bits), Expect = 6.2e-43, Sum P(3) = 6.2e-43
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 233 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 340
Score = 104 (41.7 bits), Expect = 6.2e-43, Sum P(3) = 6.2e-43
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 177
Score = 38 (18.4 bits), Expect = 6.2e-43, Sum P(3) = 6.2e-43
Identities = 14/58 (24%), Positives = 19/58 (32%)
Query: 208 PTRSRSITIPQVPMYPTFCNGREIA-LYIDKXXXXXXXXXXX------VLNILYWTSF 258
P I PQ P P G + LY+D+ + NI YW +
Sbjct: 389 PMEGSGIYSPQPPA-PLLREGETMRKLYVDQAKRIDTISRAVFPFTFLIFNIFYWVVY 445
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 334 (122.6 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 51 (23.0 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + NN N P S+S P+ M F + A IDK
Sbjct: 377 MGPACLQAKDGISVKGANNN--NTTNPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 427
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 428 RIGFPMAFLIFNMFYW 443
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 334 (122.6 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 51 (23.0 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + NN N P S+S P+ M F + A IDK
Sbjct: 377 MGPACLQAKDGISVKGANNN--NTTNPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 427
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 428 RIGFPMAFLIFNMFYW 443
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 334 (122.6 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 50 (22.7 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + NN N P S+S P+ M F + A IDK
Sbjct: 377 MGPACLQAKDGISVKGANNN--NTTNPAPAPSKS---PE-EMRKLFI---QRAKKIDKIS 427
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 428 RIGFPMAFLIFNMFYW 443
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 334 (122.6 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 46 (21.3 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 21/76 (27%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + N+ N P S+S P+ M F + A IDK
Sbjct: 377 MGPACLQAKDGISVKGANNS--NTTNPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 427
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 428 RIGFPMAFLIFNMFYW 443
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 334 (122.6 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 46 (21.3 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 21/76 (27%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + N+ N P S+S P+ M F + A IDK
Sbjct: 377 MGPACLQAKDGISVKGANNS--NTTNPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 427
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 428 RIGFPMAFLIFNMFYW 443
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 334 (122.6 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 143 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 202
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 203 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 250
Score = 95 (38.5 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 30 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 78
Score = 46 (21.3 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 21/76 (27%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + N+ N P S+S P+ M F + A IDK
Sbjct: 286 MGPACLQAKDGISVKGANNS--NTTNPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 336
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 337 RIGFPMAFLIFNMFYW 352
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 334 (122.6 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 213 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 272
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 273 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 320
Score = 95 (38.5 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 100 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 148
Score = 45 (20.9 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 21/76 (27%), Positives = 28/76 (36%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + N N P S+S P+ M F + A IDK
Sbjct: 364 MGPACLQAKDGISVKGANNTTT---NPPPAPSKS---PE-EMRKLFI---QRAKKIDKIS 413
Query: 240 XXXXXXXXXVLNILYW 255
+ N+ YW
Sbjct: 414 RIGFPMAFLIFNMFYW 429
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 334 (122.6 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI F+L R++GY+L YIPS LIV++SWISFWI +A PARV LG+
Sbjct: 226 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 285
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 286 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 333
Score = 95 (38.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
LD + L +IW+PD FF N K FHE++ N L + + +LY T
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRIT 161
Score = 37 (18.1 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 180 MGPIATKAMKGYSEEDLRNN 199
MGP +A G S + NN
Sbjct: 383 MGPACLQAKDGISVKGANNN 402
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 334 (122.6 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 61/108 (56%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS L V++SW+SFWI +A PARV LG+
Sbjct: 276 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGI 335
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 336 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 383
Score = 105 (42.0 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 163 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLK 221
Score = 37 (18.1 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 230 EIALYIDKXXXXXXXXXXXVLNILYWTSF 258
E A ID V N+ YW ++
Sbjct: 495 EQAKRIDTISRAVFPLSFLVFNVFYWVTY 523
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 338 (124.0 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 61/108 (56%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 233 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A +N
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAIN 340
Score = 108 (43.1 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDLK 177
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 62/108 (57%), Positives = 83/108 (76%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV+LG+
Sbjct: 233 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGI 292
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 340
Score = 104 (41.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 177
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 339 (124.4 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 105 (42.0 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLK 177
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 339 (124.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 104 (41.7 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 118 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 176
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 338 (124.0 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 62/108 (57%), Positives = 81/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 230 CTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 289
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ+ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 290 TTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 337
Score = 104 (41.7 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 116 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 174
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 338 (124.0 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 61/101 (60%), Positives = 81/101 (80%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+T++LT+
Sbjct: 235 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 295 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 335
Score = 104 (41.7 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FHE++ N L ++ + +LY T + + +K
Sbjct: 113 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLK 171
>WB|WBGene00008022 [details] [associations]
symbol:lgc-41 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000231336 KO:K05397
EMBL:Z50027 RefSeq:NP_001123116.1 UniGene:Cel.11219
ProteinModelPortal:A7LPG1 SMR:A7LPG1 EnsemblMetazoa:C39B10.2b
GeneID:183331 KEGG:cel:CELE_C39B10.2 UCSC:C39B10.2b CTD:183331
WormBase:C39B10.2b eggNOG:NOG296808 InParanoid:A7LPG1 OMA:YFANARQ
NextBio:920750 ArrayExpress:A7LPG1 Uniprot:A7LPG1
Length = 564
Score = 291 (107.5 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 53/115 (46%), Positives = 79/115 (68%)
Query: 66 KYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARV 125
+Y++ N+ +F+C++ L R +GY+L +YIP+ LIV++SW+SFWI A+PARV
Sbjct: 215 QYALTENSYKSDDFSCLSGNLFLSRSIGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARV 274
Query: 126 TLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
TL T+L++L T + LP VSY KAID+W +C FVF +L+EFA +N+YM
Sbjct: 275 TLSFTTLVSLTTLGNGLRFGLPQVSYAKAIDLWYGACMFFVFCALLEFATINSYM 329
Score = 112 (44.5 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIKY 67
+ IW PD +F NA++ +F E+++PN L++ D T+ Y CT + + ++Y
Sbjct: 104 KQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAYSCRCTLTVACSLNLRY 157
Score = 40 (19.1 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 232 ALYIDKXXXXXXXXXXXVLNILYWTSFL 259
AL IDK + N+ YW +L
Sbjct: 528 ALKIDKSCRYLFPAAFLLWNVFYWWYYL 555
Score = 37 (18.1 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 177 NNYMGPIATKAMKGYSEEDLRNNV--DEFKNLD 207
N Y G K+ +GY + D ++ + K +D
Sbjct: 413 NRYRGLKTEKSPRGYGKPDTVQDILSERIKFID 445
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 313 (115.2 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 66/178 (37%), Positives = 108/178 (60%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ S + + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 240 FVGLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 299
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN---- 177
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++
Sbjct: 300 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTS 359
Query: 178 NYMGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFC-NGREIALY 234
N G ATK K ++ + + L P + I++PQ Y C G++ A +
Sbjct: 360 NQKGKTATKDRKLKNKASMTPGLHPGSTLIPMNN--ISVPQEDDYGYQCLEGKDCASF 415
Score = 98 (39.6 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L +++D +LY T + ++++
Sbjct: 134 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 192
Score = 37 (18.1 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWVGYL 463
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 165 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 224
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 225 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 272
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 52 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 110
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 165 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 224
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 225 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 272
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 52 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 110
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 341 (125.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 93 (37.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 341 (125.1 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 62/108 (57%), Positives = 82/108 (75%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C G FTCI V F+L R++GY+L YIPS LIV++SW+SFWI +A PARV LG+
Sbjct: 232 CTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 291
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T++LT+ TQ++ S+ SLP VSYVKAIDIWM+ C +FVF +L+E+A VN
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVN 339
Score = 91 (37.1 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
LD + L +IW+PD FF N K FH+++ N L + +LY T + + +K
Sbjct: 119 LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLK 177
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 300 (110.7 bits), Expect = 4.4e-38, Sum P(3) = 4.4e-38
Identities = 60/161 (37%), Positives = 100/161 (62%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ + ++ + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 217 FVGLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 276
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 277 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT- 335
Query: 182 PIATKAMKGYSEEDLRNNVDEFKNLDPTRS----RSITIPQ 218
+ K K E +N L P + S+T+PQ
Sbjct: 336 --SNKKAKTTRERKPKNKASMSSGLHPGSTLIPMNSLTLPQ 374
Score = 98 (39.6 bits), Expect = 4.4e-38, Sum P(3) = 4.4e-38
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L +++D +LY T + ++++
Sbjct: 111 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 169
Score = 37 (18.1 bits), Expect = 4.4e-38, Sum P(3) = 4.4e-38
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 416 IDSYSRIFFPTAFALFNLVYWVGYL 440
>WB|WBGene00001587 [details] [associations]
symbol:ggr-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 EMBL:FO080451 GeneID:191637
KEGG:cel:CELE_C45B2.4 CTD:191637 RefSeq:NP_001024472.2
ProteinModelPortal:Q2WF65 EnsemblMetazoa:C45B2.4a.1
EnsemblMetazoa:C45B2.4a.2 UCSC:C45B2.4b.2 WormBase:C45B2.4a
InParanoid:Q2WF65 OMA:IAMNDTA NextBio:949770 ArrayExpress:Q2WF65
Uniprot:Q2WF65
Length = 546
Score = 298 (110.0 bits), Expect = 9.5e-38, Sum P(3) = 9.5e-38
Identities = 50/109 (45%), Positives = 79/109 (72%)
Query: 69 ICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLG 128
+C G ++C+ F ++R + +H+ +Y+P+ LIVV+SW SFW+ EA+PARV+L
Sbjct: 214 LCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPARVSLA 273
Query: 129 VTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
+T+LLTL+TQ ++ +LP VSY+KAID+WM +C +FVF ++EF +VN
Sbjct: 274 ITTLLTLSTQANAARMALPEVSYMKAIDVWMGACMMFVFGVMIEFTIVN 322
Score = 107 (42.7 bits), Expect = 9.5e-38, Sum P(3) = 9.5e-38
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 2 SEEYRIL--DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
+E R+L D L +W+PD +F NA+ FHE++ PN +W+ D ++LY
Sbjct: 95 NETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 146
Score = 44 (20.5 bits), Expect = 9.5e-38, Sum P(3) = 9.5e-38
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 184 ATKAMKGYSEEDLRNNVDE-FKNL---DPTRSR---SITIPQVPMYPTFCNGREIALYID 236
A+ + G +R E KN D +R + S I Q+ + GR A ID
Sbjct: 461 ASSPLMGNGRAHVRYGAAEKMKNRKCNDSSRKKEKWSSAIKQIQKHKKIA-GRNRAKKID 519
Query: 237 KXXXXXXXXXXXVLNILYWTSFL 259
+ + N+ YW +L
Sbjct: 520 QTSRWIFPLTFIIFNLTYWIYYL 542
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 291 (107.5 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 50/104 (48%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V FNL RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 220 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 279
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 280 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 323
Score = 99 (39.9 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 100 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 148
Score = 39 (18.8 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 426 LFNLVYWVSYL 436
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 291 (107.5 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 50/104 (48%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V FNL RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 235 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 338
Score = 99 (39.9 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 115 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 163
Score = 39 (18.8 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 433 LFNLVYWVSYL 443
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 286 (105.7 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 162 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 221
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 222 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 265
Score = 99 (39.9 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 42 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 90
Score = 39 (18.8 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 360 LFNLVYWVSYL 370
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 294 (108.6 bits), Expect = 8.5e-37, Sum P(3) = 8.5e-37
Identities = 59/142 (41%), Positives = 94/142 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V FNL RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 256 GDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 375
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 376 LLRMFSFKAPTID-IRPRSATI 396
Score = 99 (39.9 bits), Expect = 8.5e-37, Sum P(3) = 8.5e-37
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 136 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 184
Score = 39 (18.8 bits), Expect = 8.5e-37, Sum P(3) = 8.5e-37
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 462 LFNLVYWVSYL 472
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 299 (110.3 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 60/139 (43%), Positives = 88/139 (63%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C + G ++C+ V +R Y+L YIP ++V++SW+SFW+ A+PARV+LGV
Sbjct: 222 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGV 281
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA-M 188
T+LLT+ATQ + SLPPVSY KAID+W C FVF +L+EFA+VN + KA M
Sbjct: 282 TTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANM 341
Query: 189 KGYSEEDLRNNVDEFKNLD 207
S + R ++++ +LD
Sbjct: 342 HKESMKKKRRDLEQ-ASLD 359
Score = 89 (36.4 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 6 RILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
+ L + +W PD FF N K+ FH + +PN Y+ ++ + ++LY
Sbjct: 108 KYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLY 153
Score = 37 (18.1 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 4/11 (36%), Positives = 10/11 (90%)
Query: 249 VLNILYWTSFL 259
+ N++YW+++L
Sbjct: 439 LFNLVYWSTYL 449
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 285 (105.4 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 51/105 (48%), Positives = 77/105 (73%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L RR+GY TYIP L VV+SW+SFWIK ++ PAR +LG+T++LT+
Sbjct: 213 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 272
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
T +T S++ LP VSY+ A+D+++S C +FVF +LME+A +N +G
Sbjct: 273 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVG 317
Score = 101 (40.6 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
L+ N + IW PD FF+N+K+ H ++ PN L +++D +LY T + ++++
Sbjct: 93 LNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQ 151
Score = 37 (18.1 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ NI+YW ++L
Sbjct: 418 LFNIVYWIAYL 428
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 295 (108.9 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 60/161 (37%), Positives = 99/161 (61%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ S ++ + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 240 FVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 299
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 300 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTS 359
Query: 182 PIATKAMKGYSEEDLRNNVDEFKNLDPTRS----RSITIPQ 218
K +G L+N L + SI++PQ
Sbjct: 360 NNKGKTTRG---RKLKNKTSASPGLHAGSTLIPMNSISLPQ 397
Score = 96 (38.9 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L ++ D +LY T + ++++
Sbjct: 134 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 192
Score = 37 (18.1 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWVGYL 463
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 289 (106.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 58/142 (40%), Positives = 94/142 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 354
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 355 LLRMFSFKAPTID-IRPRSATI 375
Score = 99 (39.9 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 115 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 163
Score = 39 (18.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 441 LFNLVYWVSYL 451
>WB|WBGene00021437 [details] [associations]
symbol:lgc-42 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000231336 EMBL:FO081640
RefSeq:NP_497489.3 ProteinModelPortal:Q9N517 SMR:Q9N517
DIP:DIP-26084N IntAct:Q9N517 MINT:MINT-1049455
EnsemblMetazoa:Y39A3B.2 GeneID:189722 KEGG:cel:CELE_Y39A3B.2
UCSC:Y39A3B.2 CTD:189722 WormBase:Y39A3B.2 eggNOG:NOG290789
InParanoid:Q9N517 OMA:CHIAIDR NextBio:943412 Uniprot:Q9N517
Length = 412
Score = 324 (119.1 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 73/201 (36%), Positives = 107/201 (53%)
Query: 67 YSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVT 126
Y++ N+ +G F+C+ + L+R +G+HL +YIP+ LIV +SW+SFWI A+PARV+
Sbjct: 206 YTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVS 265
Query: 127 LGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM------ 180
L T+LLTL+TQ + +LP VSY KAID + C +F+F L+EFA VN+YM
Sbjct: 266 LSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVCMLFIFGVLLEFAAVNSYMRRANKY 325
Query: 181 GPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVP--MYPTFCNGREIALYIDKX 238
+A K Y + + + D PT+ MY R+ AL IDK
Sbjct: 326 NHMAEKIQSAYGGKPIIADYDSDYEEGPTKYYGNLNKNSAHLMYKALKFSRK-ALSIDKA 384
Query: 239 XXXXXXXXXXVLNILYWTSFL 259
+ N+ YW +L
Sbjct: 385 ARFAFPCVFAIFNVFYWLYYL 405
Score = 85 (35.0 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+E + D + L IW PD +F NA+ FH++++ N +++ T+ Y + T
Sbjct: 82 TEHVLVNDKDILDKIWLPDLYFANARTAYFHKVTVHNFNMFISPQGTISYGTRVT 136
>WB|WBGene00001586 [details] [associations]
symbol:ggr-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 EMBL:Z46791 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 PIR:T19145 RefSeq:NP_496306.2
ProteinModelPortal:Q09453 SMR:Q09453 PaxDb:Q09453
EnsemblMetazoa:C09G5.1 GeneID:191636 KEGG:cel:CELE_C09G5.1
UCSC:C09G5.1 CTD:191636 WormBase:C09G5.1 eggNOG:NOG307434
InParanoid:Q09453 KO:K05397 OMA:REITHHI NextBio:949766
Uniprot:Q09453
Length = 473
Score = 288 (106.4 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 60/149 (40%), Positives = 95/149 (63%)
Query: 65 IKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPAR 124
IK+ + G ++ F++ R + +H+ +YIP++LIV++SW SFW+ EA+P R
Sbjct: 220 IKFYTKRDKYATGIWSSAVAEFHVDREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPGR 279
Query: 125 VTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG-PI 183
V+L +T+LLTLATQ++ ++ +LP S VKAID+WM +C FVF +++EF VVN + +
Sbjct: 280 VSLSITTLLTLATQSSAARMALPQASDVKAIDVWMGTCMAFVFSAMIEFTVVNYCVRRKV 339
Query: 184 ATKAM-KGYSEE--DL----RNNVDEFKN 205
TK +G SE+ D+ R D+F N
Sbjct: 340 RTKIKPRGLSEQVHDMVAQYREKKDKFNN 368
Score = 100 (40.3 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
+W PD +F NA+ +FH+++ PN +W+Y + T+ Y
Sbjct: 121 LWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWY 156
Score = 42 (19.8 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 189 KGYSEEDLR--NNVDEF--KNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXXXXXXX 244
+ + ++++R N F ++L PT R ++ R+ A ID+
Sbjct: 390 RNFEKKEVREMNQASLFVRRSLLPTSKRKTIEDRINRVE---ENRKNAQKIDRYSRALFP 446
Query: 245 XXXXVLNILYWTSFL 259
+ NI YW +L
Sbjct: 447 LAFIIFNIFYWIYYL 461
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 293 (108.2 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 60/160 (37%), Positives = 99/160 (61%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ S ++ + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 243 FVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 302
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 303 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFT- 361
Query: 182 PIATKAMKGYSEEDLRNNVDEFKNLDPTRS----RSITIP 217
+ K K L+N L P + SI++P
Sbjct: 362 --SNKKGKTTRNRKLKNKSSMSPGLHPGSTLIPMNSISLP 399
Score = 98 (39.6 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L +++D +LY T + ++++
Sbjct: 137 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 195
Score = 37 (18.1 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 442 IDSYSRIFFPTAFALFNLVYWVGYL 466
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 288 (106.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 51/119 (42%), Positives = 86/119 (72%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ + + + G++ + V F+L RR+GY TYIP LIVV+SW+SFWI +A+
Sbjct: 242 FVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV 360
Score = 101 (40.6 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T + +K+
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLKL 194
Score = 39 (18.8 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW S+L
Sbjct: 443 IDSYARIFFPTAFGLFNVVYWFSYL 467
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 285 (105.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 51/105 (48%), Positives = 77/105 (73%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L RR+GY TYIP L VV+SW+SFWIK ++ PAR +LG+T++LT+
Sbjct: 222 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 281
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
T +T S++ LP VSY+ A+D+++S C +FVF +LME+A +N +G
Sbjct: 282 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVG 326
Score = 101 (40.6 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
L+ N + IW PD FF+N+K+ H ++ PN L +++D +LY T + ++++
Sbjct: 102 LNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQ 160
Score = 37 (18.1 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ NI+YW ++L
Sbjct: 427 LFNIVYWIAYL 437
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 286 (105.7 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 235 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 295 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 338
Score = 99 (39.9 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 115 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 163
Score = 39 (18.8 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 433 LFNLVYWVSYL 443
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 289 (106.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 58/142 (40%), Positives = 94/142 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 375
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 376 LLRMFSFKAPTID-IRPRSATI 396
Score = 99 (39.9 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 136 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 184
Score = 39 (18.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 462 LFNLVYWVSYL 472
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 289 (106.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 58/142 (40%), Positives = 94/142 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 375
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 376 LLRMFSFKAPTID-IRPRSATI 396
Score = 99 (39.9 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 136 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 184
Score = 39 (18.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 462 LFNLVYWVSYL 472
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 288 (106.4 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 58/142 (40%), Positives = 93/142 (65%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 376
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 377 LLRMFSFKAPTID-IRPRSATI 397
Score = 99 (39.9 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 463 LFNLVYWVSYL 473
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 288 (106.4 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 58/142 (40%), Positives = 93/142 (65%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 376
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 377 LLRMFSFKAPTID-IRPRSATI 397
Score = 99 (39.9 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 463 LFNLVYWVSYL 473
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 285 (105.4 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 51/105 (48%), Positives = 77/105 (73%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L RR+GY TYIP L VV+SW+SFWIK ++ PAR +LG+T++LT+
Sbjct: 240 GEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMT 299
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG 181
T +T S++ LP VSY+ A+D+++S C +FVF +LME+A +N +G
Sbjct: 300 TLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVG 344
Score = 101 (40.6 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
L+ N + IW PD FF+N+K+ H ++ PN L +++D +LY T + ++++
Sbjct: 120 LNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQ 178
Score = 37 (18.1 bits), Expect = 6.0e-36, Sum P(3) = 6.0e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ NI+YW ++L
Sbjct: 445 LFNIVYWIAYL 455
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 290 (107.1 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 51/118 (43%), Positives = 85/118 (72%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ S ++ + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 240 FVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 299
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 300 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYF 357
Score = 96 (38.9 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L ++ D +LY T + ++++
Sbjct: 134 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 192
Score = 37 (18.1 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWVGYL 463
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 286 (105.7 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 315
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 316 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 359
Score = 99 (39.9 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 136 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 184
Score = 39 (18.8 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 454 LFNLVYWVSYL 464
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 286 (105.7 bits), Expect = 6.7e-36, Sum P(3) = 6.7e-36
Identities = 49/104 (47%), Positives = 80/104 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 257 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 360
Score = 99 (39.9 bits), Expect = 6.7e-36, Sum P(3) = 6.7e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 6.7e-36, Sum P(3) = 6.7e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 455 LFNLVYWVSYL 465
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 285 (105.4 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 49/104 (47%), Positives = 79/104 (75%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 360
Score = 99 (39.9 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 455 LFNLVYWVSYL 465
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 285 (105.4 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 49/104 (47%), Positives = 79/104 (75%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 257 GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++
Sbjct: 317 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV 360
Score = 99 (39.9 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 455 LFNLVYWVSYL 465
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 289 (106.8 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 51/118 (43%), Positives = 85/118 (72%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ + ++ L G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 236 FVGLRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 295
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 296 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYF 353
Score = 96 (38.9 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L ++ D +LY T + ++++
Sbjct: 130 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 188
Score = 36 (17.7 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID + N++YW +L
Sbjct: 438 IDSYSRIFFPTAFALFNLVYWIGYL 462
>UNIPROTKB|F5HB82 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IEA] [GO:0060077 "inhibitory synapse" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0005254 KO:K05186 CTD:2566 UniGene:Hs.7195
GeneID:2566 KEGG:hsa:2566 HGNC:HGNC:4087 GenomeRNAi:2566
NextBio:10145 OMA:GFTSQKS EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
IPI:IPI00396250 RefSeq:NP_944493.2 ProteinModelPortal:F5HB82
SMR:F5HB82 PRIDE:F5HB82 Ensembl:ENST00000414552 UCSC:uc010jjc.3
ArrayExpress:F5HB82 Bgee:F5HB82 Uniprot:F5HB82
Length = 515
Score = 289 (106.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 58/142 (40%), Positives = 94/142 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ ++V F+L RR+GY TYIP LIVV+SW+SFWI +A+PAR +LG+T++LT+
Sbjct: 297 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMT 356
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T +T +++SLP VSYV A+D+++S C +FVF +L+E+ ++ ++ K +++
Sbjct: 357 TLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNP 416
Query: 197 RNNVDEFK--NLDPTRSRSITI 216
+ FK +D R RS TI
Sbjct: 417 LLRMFSFKAPTID-IRPRSATI 437
Score = 99 (39.9 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD FF+N+KK H ++ PN L +++D +LY T
Sbjct: 137 LNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLT 185
Score = 39 (18.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 249 VLNILYWTSFL 259
+ N++YW S+L
Sbjct: 503 LFNLVYWVSYL 513
>UNIPROTKB|E1C779 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005440
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:RGRIHID EMBL:AC145944
EMBL:AADN02017655 EMBL:AADN02017656 EMBL:AADN02017657
EMBL:AADN02017658 IPI:IPI00811977 ProteinModelPortal:E1C779
Ensembl:ENSGALT00000030259 Uniprot:E1C779
Length = 465
Score = 295 (108.9 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 56/120 (46%), Positives = 82/120 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F+L RR+GY TYIP L VV+SW+SFWIK +A PAR LG+T++LT+
Sbjct: 238 GDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG---PIATKAMKGYSE 193
T +T +++SLP VSYV A+D++++ C +FVF +LME+A +N Y P TK K E
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPNCTKKKKSVRE 357
Score = 85 (35.0 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD F+N+K H ++ PN L +++D +LY T
Sbjct: 118 LNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLT 166
Score = 38 (18.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 233 LYIDKXXXXXXXXXXXVLNILYWTSFL 259
L +D + N++YW +L
Sbjct: 437 LELDSYSRVFFHTSFLLFNLIYWVGYL 463
>UNIPROTKB|Q99928 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR005437
InterPro:IPR005440 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0042493 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000231337 HOVERGEN:HBG051707 KO:K05186 EMBL:S82769
EMBL:AF269144 EMBL:AF269135 EMBL:AF269136 EMBL:AF269137
EMBL:AF269138 EMBL:AF269139 EMBL:AF269140 EMBL:AF269141
EMBL:AF269142 EMBL:AF269143 EMBL:AH009226 IPI:IPI00294459
RefSeq:NP_150092.2 UniGene:Hs.569475 ProteinModelPortal:Q99928
SMR:Q99928 STRING:Q99928 PhosphoSite:Q99928 DMDM:13959689
PRIDE:Q99928 Ensembl:ENST00000333743 GeneID:2567 KEGG:hsa:2567
UCSC:uc001zbf.3 CTD:2567 GeneCards:GC15P027216 H-InvDB:HIX0026811
HGNC:HGNC:4088 MIM:600233 neXtProt:NX_Q99928 PharmGKB:PA28502
eggNOG:NOG300758 InParanoid:Q99928 OMA:RGRIHID PhylomeDB:Q99928
BindingDB:Q99928 ChEMBL:CHEMBL2739 GenomeRNAi:2567 NextBio:10153
ArrayExpress:Q99928 Bgee:Q99928 CleanEx:HS_GABRG3
Genevestigator:Q99928 Uniprot:Q99928
Length = 467
Score = 291 (107.5 bits), Expect = 9.1e-35, Sum P(3) = 9.1e-35
Identities = 61/151 (40%), Positives = 91/151 (60%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F L RR+GY TYIP L VV+SW+SFWIK +A PAR LG+T++LT+
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 297
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG---PIATKAMKGYSE 193
T +T +++SLP VSYV A+D++++ C +FVF +LME+A +N Y P TK
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPTTTKKTTSLLH 357
Query: 194 EDLRNNVDEFKNLDPTRSRSITIPQVPMYPT 224
D + E +L + S+ + P PT
Sbjct: 358 PDSSRWIPERISLQAPSNYSLLDMRPP--PT 386
Score = 85 (35.0 bits), Expect = 9.1e-35, Sum P(3) = 9.1e-35
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD F+N+K H ++ PN L +++D +LY T
Sbjct: 118 LNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLT 166
Score = 36 (17.7 bits), Expect = 9.1e-35, Sum P(3) = 9.1e-35
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 233 LYIDKXXXXXXXXXXXVLNILYWTSFL 259
L +D + N++YW +L
Sbjct: 439 LELDSYSRVFFPTSFLLFNLVYWVGYL 465
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 338 (124.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + +K + +++ Q +K + + C G FTCI F+L R++GY+
Sbjct: 195 NDLIFEWQEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYY 254
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SWISFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 255 LIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAI 314
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 315 DIWMAVCLLFVFSALLEYAAVN 336
Score = 54 (24.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 24/76 (31%), Positives = 29/76 (38%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G S + NN N P SRS P+ M F + A IDK
Sbjct: 372 MGPACLQAKDGISVKGANNN--NTANPVPPPSRS---PE-EMRKLFI---QRAKKIDKIS 422
Query: 240 XXXXXXXXXVLNILYW 255
+ NI YW
Sbjct: 423 RIGFPMAFLIFNIFYW 438
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 315 (115.9 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 54/110 (49%), Positives = 77/110 (70%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C + G ++C VV LRR Y+L YIP ++VV+SW+SFW+ +A+PARV+LGV
Sbjct: 231 CTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGV 290
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T+LLT+ TQ + LPPVSY+KA+D+W+ C F+F +L+E+AVVN Y
Sbjct: 291 TTLLTMTTQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALLEYAVVNYY 340
Score = 76 (31.8 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
Q IW PD FF+N K+ H + PN + ++ + +LY
Sbjct: 123 QQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILY 160
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 308 (113.5 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 53/109 (48%), Positives = 77/109 (70%)
Query: 68 SICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
++C + G ++C+ V LRR+ Y+L YIPS ++V++SW+SFW+ A+PARVTL
Sbjct: 220 TLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTL 279
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
GVT+LLT+ TQ + LPPVSY KAID+W+ +C F+F +L+EFA V
Sbjct: 280 GVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAWV 328
Score = 88 (36.0 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIKY 67
Q IW PD FF+N K+ H++ PN + ++ D +LY + + + ++Y
Sbjct: 114 QQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQY 167
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 315 (115.9 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 52/107 (48%), Positives = 78/107 (72%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C + G+++C+ + LRR+ Y+L YIPS ++V++SW+SFWI A+PARVTLGV
Sbjct: 444 CTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGV 503
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
T+LLT+ TQ++ LPPV+Y+KAID+W+ +C F+F +L+EFA V
Sbjct: 504 TTLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFAWV 550
Score = 88 (36.0 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIKY 67
Q IW PD FF+N K+ H + PN + ++ D T+LY + + + ++Y
Sbjct: 336 QEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHLQY 389
>WB|WBGene00020767 [details] [associations]
symbol:lgc-40 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 HSSP:P23415
HOGENOM:HOG000231336 KO:K05397 EMBL:FO081414 PIR:T16935
RefSeq:NP_508428.2 ProteinModelPortal:Q22741 SMR:Q22741
IntAct:Q22741 MINT:MINT-214095 TCDB:1.A.9.6.4 PaxDb:Q22741
EnsemblMetazoa:T24D8.1 GeneID:188854 KEGG:cel:CELE_T24D8.1
UCSC:T24D8.1 CTD:188854 WormBase:T24D8.1 eggNOG:NOG328391
InParanoid:Q22741 OMA:VISWFNF NextBio:940332 Uniprot:Q22741
Length = 494
Score = 285 (105.4 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 48/111 (43%), Positives = 77/111 (69%)
Query: 65 IKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPAR 124
I+ C G ++C+ +F + R + +H+ TY+P+ALIVV+SW +FW++ ++ PAR
Sbjct: 215 IRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDSAPAR 274
Query: 125 VTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAV 175
V+L +T+LLT++TQ + +LP VSY+KAID+WM SC FVF ++EF +
Sbjct: 275 VSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSCMAFVFGVMIEFTI 325
Score = 80 (33.2 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
+ D+ + +W PD +F NA+ F +++ N +W+Y + + Y
Sbjct: 104 VRDLTVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 148
Score = 45 (20.9 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 228 GREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
GR +A ID+ + N+ YW+ +L
Sbjct: 460 GRRVAQRIDERCRIVFPMIFLLFNVAYWSFYL 491
>UNIPROTKB|F6Q4V7 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:DAAA02017594
EMBL:DAAA02017595 EMBL:DAAA02017596 EMBL:DAAA02017597
IPI:IPI00715159 Ensembl:ENSBTAT00000016309 Uniprot:F6Q4V7
Length = 354
Score = 287 (106.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 50/118 (42%), Positives = 85/118 (72%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
FV ++ + ++ + G++ + + F+L RR+GY TYIP L VV+SW+SFWI +A+
Sbjct: 217 FVGLRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 276
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
PAR +LG+T++LT+ T +T +++SLP VSYV A+D+++S C +FVF +LME+ ++ +
Sbjct: 277 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYF 334
Score = 98 (39.6 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 7 ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI 65
+L+ N + IW PD FF+N++K H ++ PN L +++D +LY T + ++++
Sbjct: 111 MLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 169
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 302 (111.4 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 56/106 (52%), Positives = 81/106 (76%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ +++VF LRR +GY +F TY+P LIV++SW+SFWI EA ARV LG+T++LT+
Sbjct: 246 GSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMT 305
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMG 181
T +T +QSLP +SYVK+IDI++ C VFVF +L+E+A VN +Y G
Sbjct: 306 TISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYWG 351
Score = 69 (29.3 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIK 66
QNIW PD F N K HE++ N L + D + Y T+ + + ++
Sbjct: 133 QNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLR 185
Score = 40 (19.1 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 229 REIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
R++ L IDK V N+ YW+ ++
Sbjct: 517 RDVNL-IDKYSRVVFPVCFIVFNLFYWSYYM 546
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 307 (113.1 bits), Expect = 9.6e-34, Sum P(2) = 9.6e-34
Identities = 65/151 (43%), Positives = 95/151 (62%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
IKY+ C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 237 IKYANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 296
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG-P 182
RV LG+ S+L+L+++ T LP VSYVKAIDIWM +C ++ F SL+E+AVV + P
Sbjct: 297 RVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWMIACLLYGFASLVEYAVVQVMLNSP 356
Query: 183 IATKAMKGYSEEDLRNNVDEFKNLDPTRSRS 213
+A K E + E +N P ++ S
Sbjct: 357 KRIEAEKIKMAE--KEKAREKENKTPAKTNS 385
Score = 83 (34.3 bits), Expect = 9.6e-34, Sum P(2) = 9.6e-34
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D Q +W+PD FF N K FH+++ N L+++ + +L
Sbjct: 129 VDPKMFQCLWKPDLFFANEKNANFHDVTQENILLFIFRNGDVL 171
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 250 (93.1 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 112 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 171
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 172 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 231
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 232 FIAVCYAFVFSALIEFATVNYF 253
Score = 104 (41.7 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 26 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 77
Score = 36 (17.7 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 333 IDRMSRIVFPVLFGTFNLVYWATYL 357
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 296 (109.3 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 59/151 (39%), Positives = 96/151 (63%)
Query: 62 FVKIKYS-ICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y I N V G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 212 FSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 271
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A+VN
Sbjct: 272 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNYI 331
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTR 210
+ K +E + N ++ + +DP +
Sbjct: 332 FFGRGPQQQKKAAERASKANNEKMR-MDPNK 361
Score = 80 (33.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 109 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 152
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 276 (102.2 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 57/142 (40%), Positives = 91/142 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 173 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 232
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+++
Sbjct: 233 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLQEKNM 291
Query: 197 -RNNVDEFKNLDPTRSRSITIP 217
R NV + TR R+ P
Sbjct: 292 SRENVS--MTFEQTRDRAKGFP 311
Score = 73 (30.8 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 46 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRIT 100
Score = 38 (18.4 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 388 IDKYSRLIFPASYIFFNLIYWSVF 411
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 336 (123.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/142 (45%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + +K + +++ Q +K + + C G FTCI F+L R++GY+
Sbjct: 203 NDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYY 262
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 263 LIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAI 322
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 323 DIWMAVCLLFVFSALLEYAAVN 344
Score = 38 (18.4 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXX 239
MGP +A G + + NN N P + T+ + M F + A ID
Sbjct: 380 MGPACLQAKDGMAIKGNNNNAPTSTN-PPEK----TVEE--MRKLFISR---AKRIDTVS 429
Query: 240 XXXXXXXXXVLNILYWTSF 258
+ NI YW ++
Sbjct: 430 RVAFPLVFLIFNIFYWITY 448
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 268 (99.4 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN++ + F +R +G++L Y PS+LIVV+SW+SFW+ EA+ ARV +GVT++LT+
Sbjct: 242 GNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T T + SLP VSYVK++D+++ C VF SL+E+A + M
Sbjct: 302 TLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGYLM 345
Score = 83 (34.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 3 EEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYL 41
E+ + ++ ++ IW PD FF N KK FHE + N +L
Sbjct: 118 EDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFL 156
Score = 44 (20.5 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 15/77 (19%), Positives = 32/77 (41%)
Query: 187 AMKGYSEEDLRNNVDEFKNLD---PTRSRSITIPQVPMYP-TFCNGREIALYIDKXXXXX 242
+MK Y ++ + + ++D P S + +P +P P G+ +D
Sbjct: 383 SMKNYQNNNIHHRPSD-GHVDQRIPLLSM-VPMPPIPFKPQNGAWGKVRPAQVDLFSRFA 440
Query: 243 XXXXXXVLNILYWTSFL 259
+ +I+YWT ++
Sbjct: 441 FPIFFVIFHIVYWTYYI 457
>MGI|MGI:95624 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
MGI:MGI:95624 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:X59300 EMBL:AC102098 EMBL:AC102129 EMBL:AC116146
EMBL:AC134844 EMBL:AC156610 EMBL:AC158550 EMBL:CH466599
IPI:IPI00118860 PIR:S16915 RefSeq:NP_032100.2 UniGene:Mm.434343
ProteinModelPortal:P27681 STRING:P27681 PhosphoSite:P27681
PRIDE:P27681 Ensembl:ENSMUST00000068911 GeneID:14407 KEGG:mmu:14407
UCSC:uc009hdz.1 InParanoid:P27681 BindingDB:P27681
ChEMBL:CHEMBL4236 NextBio:285977 Genevestigator:P27681
GermOnline:ENSMUSG00000055026 Uniprot:P27681
Length = 467
Score = 293 (108.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 52/103 (50%), Positives = 77/103 (74%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F L RR+GY TYIP L VV+SW+SFWIK +A PAR TLG+T++LT+
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T +T +++SLP VSYV A+D++++ C +FVF +LME+A +N Y
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
Score = 85 (35.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD F+N+K H ++ PN L +++D +LY T
Sbjct: 118 LNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLT 166
>RGD|621735 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor, gamma
3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
RGD:621735 GO:GO:0005886 GO:GO:0042493 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:M81142 EMBL:X63324 IPI:IPI00200810 PIR:S19317
RefSeq:NP_077346.3 UniGene:Rn.10369 ProteinModelPortal:P28473
SMR:P28473 Ensembl:ENSRNOT00000019971 GeneID:79211 KEGG:rno:79211
UCSC:RGD:621735 InParanoid:P28473 BindingDB:P28473 ChEMBL:CHEMBL336
NextBio:614604 ArrayExpress:P28473 Genevestigator:P28473
GermOnline:ENSRNOG00000014862 Uniprot:P28473
Length = 467
Score = 293 (108.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 52/103 (50%), Positives = 77/103 (74%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F L RR+GY TYIP L VV+SW+SFWIK +A PAR TLG+T++LT+
Sbjct: 238 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMT 297
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T +T +++SLP VSYV A+D++++ C +FVF +LME+A +N Y
Sbjct: 298 TLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
Score = 85 (35.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ N + IW PD F+N+K H ++ PN L +++D +LY T
Sbjct: 118 LNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLT 166
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 292 (107.8 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 61/154 (39%), Positives = 97/154 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 147 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 206
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 207 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 266
Query: 180 M---GPIATK--AMKGYSEEDLRNNVDEFKNLDP 208
GP K A K S + + +D K +DP
Sbjct: 267 FFGRGPQRQKKAAEKAASANNEKMRLDVNK-MDP 299
Score = 80 (33.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 44 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 87
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 296 (109.3 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 69/169 (40%), Positives = 101/169 (59%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV----NNY 179
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ +C +F F SL+E+AVV NN
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNP 357
Query: 180 MGPIATKAMKGYSEEDLRN--NVDEFKNLDPTRSRSITIPQVPMYPTFC 226
A KA +E+ + NV + KN S + I + + T C
Sbjct: 358 KRVEAEKARIAKAEQAVGKGGNVAK-KNTVNGASTPVHISTLQVGETRC 405
Score = 83 (34.3 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 299 (110.3 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 56/113 (49%), Positives = 80/113 (70%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 237 IEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 296
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+L+++ T LP VSYVKAIDIW+ +C +F F SL+E+AVV
Sbjct: 297 RVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVV 349
Score = 79 (32.9 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ + +L
Sbjct: 129 VDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVL 171
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 257 (95.5 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 47/104 (45%), Positives = 71/104 (68%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 237 MNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLGIT 296
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFA 174
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A
Sbjct: 297 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYA 340
Score = 100 (40.3 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY S T+ +
Sbjct: 122 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITSTV 173
Score = 38 (18.4 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 4/10 (40%), Positives = 9/10 (90%)
Query: 249 VLNILYWTSF 258
V+N++YW ++
Sbjct: 458 VVNVIYWVAY 467
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 290 (107.1 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 63/167 (37%), Positives = 100/167 (59%)
Query: 62 FVKIKYS-ICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y I N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 210 FSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 269
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 270 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 329
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSI--TIPQVPMYPT 224
+ K +E+ N ++ + +D + R I T MY T
Sbjct: 330 FFGRGPQRQKKAAEKAASANNEKLR-MDVNKDRRIIGTYHCPEMYST 375
Score = 80 (33.2 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 295 (108.9 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 55/113 (48%), Positives = 80/113 (70%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ +C +F F SL+E+AVV
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVV 350
Score = 83 (34.3 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 295 (108.9 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 55/113 (48%), Positives = 80/113 (70%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ +C +F F SL+E+AVV
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVV 350
Score = 83 (34.3 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 295 (108.9 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 55/113 (48%), Positives = 80/113 (70%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ +C +F F SL+E+AVV
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVV 350
Score = 83 (34.3 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 295 (108.9 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 55/113 (48%), Positives = 80/113 (70%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ +C +F F SL+E+AVV
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVV 350
Score = 83 (34.3 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 289 (106.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 56/142 (39%), Positives = 90/142 (63%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F ++Y + V+ G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 132 FSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYD 191
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN
Sbjct: 192 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYI 251
Query: 180 MGPIATKAMKGYSEEDLRNNVD 201
+ K +E+ + N D
Sbjct: 252 FFGKGPQRQKKLAEKSAKANND 273
Score = 80 (33.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 29 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 72
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 288 (106.4 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 143 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 202
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG S++D
Sbjct: 203 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGASKQD 260
Query: 196 LRNN 199
N
Sbjct: 261 QSAN 264
Score = 80 (33.2 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 23 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 66
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 288 (106.4 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 158 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 217
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG S++D
Sbjct: 218 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGASKQD 275
Query: 196 LRNN 199
N
Sbjct: 276 QSAN 279
Score = 80 (33.2 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 38 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 81
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 297 (109.6 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 67/176 (38%), Positives = 110/176 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 269
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 270 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 329
Query: 180 M---GPIATK--AMKGYS--EEDLRNNVDE--FKNL--DPTRSRSITIPQVPMYPT 224
GP K A K S E +R +V++ +K++ + T+ RS+ P + PT
Sbjct: 330 FFGRGPQRQKKAAEKAASANNEKMRLDVNKIFYKDIKQNGTQYRSLWDPTGNLSPT 385
Score = 80 (33.2 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 292 (107.8 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 55/113 (48%), Positives = 79/113 (69%)
Query: 65 IKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 123
I+Y C G +TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A A
Sbjct: 238 IEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAA 297
Query: 124 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
RV LG+ S+L+LA++ T LP VSYVKA+D+W+ C +F F SL+E+AVV
Sbjct: 298 RVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVCLLFGFASLVEYAVV 350
Score = 84 (34.6 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 297 (109.6 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 67/176 (38%), Positives = 110/176 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 217 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 276
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 277 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 336
Query: 180 M---GPIATK--AMKGYS--EEDLRNNVDE--FKNL--DPTRSRSITIPQVPMYPT 224
GP K A K S E +R +V++ +K++ + T+ RS+ P + PT
Sbjct: 337 FFGRGPQRQKKAAEKAASANNEKMRLDVNKIFYKDIKQNGTQYRSLWDPTGNLSPT 392
Score = 80 (33.2 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 114 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 157
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 295 (108.9 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 63/149 (42%), Positives = 94/149 (63%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F I Y V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 218 FSIIDYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYD 277
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAIDI++ C VFVFL+L+E+A VN
Sbjct: 278 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYI 337
Query: 180 M---GP-----IATKAMKGYSEED-LRNN 199
GP +A KA K +E+ L +N
Sbjct: 338 FFGRGPHLQKKVAEKAAKSNNEKSRLESN 366
Score = 79 (32.9 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 116 LDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLY 159
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 250 (93.1 bits), Expect = 5.0e-32, Sum P(3) = 5.0e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 187 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 246
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 247 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 306
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 307 FIAVCYAFVFSALIEFATVNYF 328
Score = 104 (41.7 bits), Expect = 5.0e-32, Sum P(3) = 5.0e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 101 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 152
Score = 36 (17.7 bits), Expect = 5.0e-32, Sum P(3) = 5.0e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 408 IDRMSRIVFPVLFGTFNLVYWATYL 432
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 296 (109.3 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 66/177 (37%), Positives = 111/177 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 269
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 270 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 329
Query: 180 M---GP-----IATKAMKGYSEEDLRNNVDE--FKNL--DPTRSRSITIPQVPMYPT 224
GP A KA +E+ +R +V++ +K++ + T+ RS+ P + PT
Sbjct: 330 FFGRGPQRQKKAAEKAANANNEK-MRLDVNKMFYKDIKQNGTQYRSLWDPTGDLSPT 385
Score = 80 (33.2 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 286 (105.7 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 57/143 (39%), Positives = 89/143 (62%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 139 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 198
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 199 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 258
Query: 188 MKGYSEEDLRNNVDEFKNLDPTR 210
K +E++ + D K D R
Sbjct: 259 QKKLAEKNAKAKNDRSKG-DSNR 280
Score = 80 (33.2 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 28 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 71
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 251 (93.4 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNPSDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 103 (41.3 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L+ + IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 113 LNNSMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 261 (96.9 bits), Expect = 6.2e-32, Sum P(3) = 6.2e-32
Identities = 50/123 (40%), Positives = 79/123 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 149 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 208
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y I + K S +
Sbjct: 209 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNIQMEKAKRKSSK 267
Query: 195 DLR 197
L+
Sbjct: 268 ALQ 270
Score = 93 (37.8 bits), Expect = 6.2e-32, Sum P(3) = 6.2e-32
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 26 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 77
Score = 36 (17.7 bits), Expect = 6.2e-32, Sum P(3) = 6.2e-32
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 429 IDKYARILFPVTFGAFNMVYWVVYL 453
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 250 (93.1 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 250 (93.1 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 250 (93.1 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 250 (93.1 bits), Expect = 6.5e-32, Sum P(3) = 6.5e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 6.5e-32, Sum P(3) = 6.5e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 6.5e-32, Sum P(3) = 6.5e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 418 IDRMSRIVFPVLFGTFNLVYWATYL 442
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 292 (107.8 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 61/154 (39%), Positives = 97/154 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 208 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 267
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 268 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 327
Query: 180 M---GPIATK--AMKGYSEEDLRNNVDEFKNLDP 208
GP K A K S + + +D K +DP
Sbjct: 328 FFGRGPQRQKKAAEKAASANNEKMRLDVNK-MDP 360
Score = 80 (33.2 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 105 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 148
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 292 (107.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 61/154 (39%), Positives = 97/154 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 269
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 270 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 329
Query: 180 M---GPIATK--AMKGYSEEDLRNNVDEFKNLDP 208
GP K A K S + + +D K +DP
Sbjct: 330 FFGRGPQRQKKAAEKAASANNEKMRLDVNK-MDP 362
Score = 80 (33.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 250 (93.1 bits), Expect = 7.2e-32, Sum P(3) = 7.2e-32
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 141 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 200
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 201 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 260
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 261 FIAVCYAFVFSALIEFATVNYF 282
Score = 104 (41.7 bits), Expect = 7.2e-32, Sum P(3) = 7.2e-32
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 55 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 106
Score = 36 (17.7 bits), Expect = 7.2e-32, Sum P(3) = 7.2e-32
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 422 IDRMSRIVFPVLFGTFNLVYWATYL 446
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 284 (105.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 155 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 214
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 215 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 274
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 275 QKKLAEKTAKAKNDRSKS 292
Score = 80 (33.2 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 44 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 87
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 284 (105.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 134 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 193
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 194 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 253
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 254 QKKLAEKTAKAKNDRSKS 271
Score = 80 (33.2 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 23 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 66
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 284 (105.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 148 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 207
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 208 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 267
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 268 QKKLAEKTAKAKNDRSKS 285
Score = 80 (33.2 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 37 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 80
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 290 (107.1 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 65/154 (42%), Positives = 96/154 (62%)
Query: 79 FTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQ 138
+TC+ V+F LRR++G+++ Y P+ LIVV+SW+SFWI P+A ARV LG+ S+L+LA++
Sbjct: 253 YTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASE 312
Query: 139 NTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV----NNYMGPIATKAMKGYSEE 194
T LP VSYVKA+D+W+ +C +F F SL+E+AVV NN A KA +E+
Sbjct: 313 CTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIAKAEQ 372
Query: 195 DLRN--NVDEFKNLDPTRSRSITIPQVPMYPTFC 226
+ NV + KN S + I + + T C
Sbjct: 373 AVGKGGNVAK-KNTVNGASTPVHISTLQVGETRC 405
Score = 83 (34.3 bits), Expect = 9.4e-32, Sum P(2) = 9.4e-32
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 50
+D + +W+PD FF N K FH+++ N L+++ D +L
Sbjct: 130 VDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>UNIPROTKB|E2R3M6 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 CTD:2563 KO:K05184
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861 RefSeq:XP_546729.3
ProteinModelPortal:E2R3M6 Ensembl:ENSCAFT00000030791 GeneID:489609
KEGG:cfa:489609 NextBio:20862765 Uniprot:E2R3M6
Length = 456
Score = 257 (95.5 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F+LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 226 MNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGIT 285
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFA 174
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A
Sbjct: 286 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYA 329
Score = 94 (38.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 111 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 162
Score = 36 (17.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 4/9 (44%), Positives = 8/9 (88%)
Query: 250 LNILYWTSF 258
+N+LYW ++
Sbjct: 446 VNVLYWAAY 454
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 248 (92.4 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + +I V G +T + F+L+R++GY +
Sbjct: 201 YIWTYNASDSVQVAPDGSRLNQYDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVI 260
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 261 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 320
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 321 FIAVCYAFVFSALIEFATVNYF 342
Score = 104 (41.7 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 115 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 166
Score = 36 (17.7 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 423 IDRMSRIVFPVLFGTFNLVYWATYL 447
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 264 (98.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 49/119 (41%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA K S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISK 357
Score = 93 (37.8 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVYL 540
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 264 (98.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 49/119 (41%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA K S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISK 357
Score = 93 (37.8 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVYL 540
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 264 (98.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 49/119 (41%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA K S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISK 357
Score = 93 (37.8 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVYL 540
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 289 (106.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 60/154 (38%), Positives = 97/154 (62%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 210 FSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 269
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 270 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 329
Query: 180 M---GPIATK--AMKGYSEEDLRNNVDEFKNLDP 208
GP K A K + + + +D K +DP
Sbjct: 330 FFGRGPQRQKKAAEKAANANNEKMRLDVNK-MDP 362
Score = 80 (33.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 150
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 289 (106.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 56/142 (39%), Positives = 90/142 (63%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F ++Y + V+ G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 211 FSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYD 270
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN
Sbjct: 271 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYI 330
Query: 180 MGPIATKAMKGYSEEDLRNNVD 201
+ K +E+ + N D
Sbjct: 331 FFGKGPQRQKKLAEKSAKANND 352
Score = 80 (33.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>ZFIN|ZDB-GENE-040426-1692 [details] [associations]
symbol:gabra6a "gamma-aminobutyric acid (GABA) A
receptor, alpha 6a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-040426-1692
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR628344 EMBL:CU062437
IPI:IPI00800523 Ensembl:ENSDART00000054982 Bgee:E7FGS3
Uniprot:E7FGS3
Length = 435
Score = 255 (94.8 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 48/103 (46%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G ++ V F L+R+LGYHL TYIP ++VV+S +SFWI E++PAR G+T++LT+
Sbjct: 220 GLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMT 279
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP VSY A+D +++ C FV +L+EFA VN Y
Sbjct: 280 TLSISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNYY 322
Score = 90 (36.7 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + IW PD FF+NA+K H M+ PN + + T+ Y T
Sbjct: 95 ILPLNNRMVDKIWTPDTFFRNARKSLAHNMTSPNKLFRIMQNGTVFYTMRLT 146
Score = 38 (18.4 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK + N++YW +L
Sbjct: 399 IDKYSRILFPLAFGIFNLVYWYIYL 423
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 301 (111.0 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 59/118 (50%), Positives = 83/118 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY +F TY+PS LIV++SW+SFWI EA ARV LG+T++LT+
Sbjct: 241 GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSE 193
T +T + SLP +SYVKAIDI++ C VFVF +L+E+A VN Y G A K +K E
Sbjct: 301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKE 358
Score = 68 (29.0 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKIKY 67
L ++ + IW PD FF N K H+++ N + L D + Y T + + + Y
Sbjct: 123 LSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHY 182
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 246 (91.7 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATYL 441
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 288 (106.4 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG S++D
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGASKQD 345
Query: 196 LRNN 199
N
Sbjct: 346 QSAN 349
Score = 80 (33.2 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 288 (106.4 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG S++D
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGASKQD 345
Query: 196 LRNN 199
N
Sbjct: 346 QSAN 349
Score = 80 (33.2 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 288 (106.4 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG S++D
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGASKQD 345
Query: 196 LRNN 199
N
Sbjct: 346 QSAN 349
Score = 80 (33.2 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 288 (106.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 65/157 (41%), Positives = 97/157 (61%)
Query: 62 FVKIKYS-ICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y I N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 211 FSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 270
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVF++L+E+A+VN
Sbjct: 271 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYI 330
Query: 180 M---GPIATK--AMKGYS--EEDLR---NNVDEFKNL 206
GP K A K S E LR N +D +N+
Sbjct: 331 FFGRGPQRQKKAAEKAASANNEKLRMDVNKMDPHENI 367
Score = 80 (33.2 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 287 (106.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 57/141 (40%), Positives = 88/141 (62%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ +++ F ++R +GY + TY+PS LI ++SW+SFWI +A ARV LGVT++LT+
Sbjct: 227 GSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 286
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN + K SE
Sbjct: 287 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGPRQQKKQSERIS 346
Query: 197 RNNVDEFKNLDPTRSRSITIP 217
+ N +E + R R P
Sbjct: 347 KAN-NERHRYEEKRVREQVDP 366
Score = 82 (33.9 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 107 LDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLY 150
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 250 (93.1 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
Score = 36 (17.7 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 477 IDRMSRIVFPVLFGTFNLVYWATYL 501
>UNIPROTKB|F1Q344 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861
Ensembl:ENSCAFT00000035570 Uniprot:F1Q344
Length = 488
Score = 257 (95.5 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F+LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 258 MNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGIT 317
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFA 174
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A
Sbjct: 318 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYA 361
Score = 94 (38.1 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 143 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 194
Score = 36 (17.7 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 4/9 (44%), Positives = 8/9 (88%)
Query: 250 LNILYWTSF 258
+N+LYW ++
Sbjct: 478 VNVLYWAAY 486
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 263 (97.6 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 55/135 (40%), Positives = 85/135 (62%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 179 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 238
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + E+ L
Sbjct: 239 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQER-----KEQKL 292
Query: 197 RNNVDEFKNLDPTRS 211
R + L P R+
Sbjct: 293 REKLPCTSGLPPPRT 307
Score = 67 (28.6 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 106
Score = 40 (19.1 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 368 IDKYSRIIFPAAYILFNLIYWSIF 391
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 260 (96.6 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 50/118 (42%), Positives = 80/118 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 173 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 232
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 233 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLQEK 289
Score = 73 (30.8 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 46 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRIT 100
Score = 38 (18.4 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 368 IDKYSRLIFPASYIFFNLIYWSVF 391
>UNIPROTKB|E2QVM5 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
CTD:2564 KO:K05185 OMA:LYTIRMT EMBL:AAEX03027052 RefSeq:XP_549340.3
Ensembl:ENSCAFT00000030414 GeneID:492220 KEGG:cfa:492220
NextBio:20864837 Uniprot:E2QVM5
Length = 488
Score = 280 (103.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 48/101 (47%), Positives = 75/101 (74%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G+FT + + FN+ RR G+ F Y+PS++ ++SW+SFWIK ++ PAR +LG+TS+LT+
Sbjct: 257 GDFTVMTLYFNVSRRFGFVAFQNYVPSSVTTMLSWVSFWIKRDSAPARTSLGITSVLTMT 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+++ P VSY+ A+D +++ C VF F +LMEFAV+N
Sbjct: 317 TLGTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLN 357
Score = 89 (36.4 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S E +L+ N + +W PD F+N+K+ H +++PN + ++ D +LY T
Sbjct: 131 SFESFVLNGNMVSQLWIPDTVFRNSKRTQEHVITMPNQMVRIHKDGKVLYTIRMT 185
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 287 (106.1 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 56/144 (38%), Positives = 89/144 (61%)
Query: 62 FVKIKYSICMNAVLLGNFTC----IAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIK 117
F ++Y + V+ C +++ F L+R +GY + TY+PS LI ++SW+SFWI
Sbjct: 211 FSIVEYRLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWIN 270
Query: 118 PEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
+A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN
Sbjct: 271 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVN 330
Query: 178 NYMGPIATKAMKGYSEEDLRNNVD 201
+ K +E+ + N D
Sbjct: 331 YIFFGKGPQRQKKLAEKSAKANND 354
Score = 80 (33.2 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 246 (91.7 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 425 IDKMSRIIFPLLFGTFNLVYWATYL 449
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 246 (91.7 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 425 IDKMSRIVFPVLFGTFNLVYWATYL 449
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 241 (89.9 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 337
Score = 103 (41.3 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
Score = 41 (19.5 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 16/83 (19%), Positives = 31/83 (37%)
Query: 177 NNYMGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYID 236
NN AT + + + + ++P + T P P TF + +I D
Sbjct: 365 NNTYTAAATSYTPNIARDPGLATIAKSATIEPKEVKPETKPAEPK-KTFNSVSKI----D 419
Query: 237 KXXXXXXXXXXXVLNILYWTSFL 259
+ + N++YW ++L
Sbjct: 420 RLSRIAFPLLFGIFNLVYWATYL 442
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 246 (91.7 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 426 IDKMSRIVFPVLFGTFNLVYWATYL 450
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 246 (91.7 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 426 IDKMSRIIFPVLFGTFNLVYWATYL 450
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 246 (91.7 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 426 IDKMSRIVFPILFGTFNLVYWATYL 450
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 246 (91.7 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 427 IDKMSRIIFPVLFGTFNLVYWATYL 451
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 246 (91.7 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 42/103 (40%), Positives = 71/103 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 242 GEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 302 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 344
Score = 100 (40.3 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 128 IWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLT 168
Score = 39 (18.8 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 427 IDKMSRIVFPILFGTFNLVYWATYL 451
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 258 (95.9 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 48/101 (47%), Positives = 73/101 (72%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 151 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 210
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 211 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 251
Score = 70 (29.7 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 24 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRIT 78
Score = 40 (19.1 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 340 IDKYSRIIFPAAYILFNLIYWSIF 363
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 261 (96.9 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 48/119 (40%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA + S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMEKAKRKTSK 357
Score = 93 (37.8 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 519 IDKYARILFPVTFGAFNMVYWVVYL 543
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 110 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 169
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 170 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 229
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 230 DIWMAVCLLFVFSALLEYAAVN 251
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 157 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 216
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 217 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 276
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 277 DIWMAVCLLFVFSALLEYAAVN 298
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 109 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 168
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 169 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 228
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 229 DIWMAVCLLFVFSALLEYAAVN 250
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + D+ + ++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 260 (96.6 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 48/119 (40%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA + S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSK 357
Score = 93 (37.8 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 518 IDKYARILFPVTFGAFNMVYWVVYL 542
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 260 (96.6 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 48/119 (40%), Positives = 77/119 (64%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSE 193
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + KA + S+
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSK 357
Score = 93 (37.8 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVN--WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N + +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 116 ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLT 167
Score = 36 (17.7 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 518 IDKYARILFPVTFGAFNMVYWVVYL 542
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 245 (91.3 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +M+ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 258 (95.9 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 45/105 (42%), Positives = 72/105 (68%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+LRR++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 238 ITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 297
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN +
Sbjct: 298 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 342
Score = 94 (38.1 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L +W PD FF+N KK H M+ PN + + T+LY T
Sbjct: 115 ILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRLT 166
Score = 37 (18.1 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 213 SITIPQVPMYPTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
S P VP P +G IDK N++YW +L
Sbjct: 501 SAVTPPVP--PASHSGTS---KIDKYARILFPVTFGAFNMVYWVVYL 542
>RGD|2648 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor, alpha 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079
PRINTS:PR01616 PROSITE:PS00236 RGD:2648 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991 IPI:IPI00197343 PIR:A34130
UniGene:Rn.10367 ProteinModelPortal:P20236 IntAct:P20236
STRING:P20236 PRIDE:P20236 InParanoid:P20236 BindingDB:P20236
ChEMBL:CHEMBL328 NextBio:604953 ArrayExpress:P20236
Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 245 (91.3 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +M+ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 456 VDKISRIIFPVLFAIFNLVYWATYV 480
>UNIPROTKB|P20236 [details] [associations]
symbol:Gabra3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
RGD:2648 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991
IPI:IPI00197343 PIR:A34130 UniGene:Rn.10367
ProteinModelPortal:P20236 IntAct:P20236 STRING:P20236 PRIDE:P20236
InParanoid:P20236 BindingDB:P20236 ChEMBL:CHEMBL328 NextBio:604953
ArrayExpress:P20236 Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 245 (91.3 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +M+ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 4.7e-31, Sum P(3) = 4.7e-31
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 456 VDKISRIIFPVLFAIFNLVYWATYV 480
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 241 (89.9 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 213 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 272
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 273 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 315
Score = 102 (41.0 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 87 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 139
Score = 39 (18.8 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 406 VDKMSRIVFPVLFAIFNLVYWATYV 430
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 288 (106.4 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 57/143 (39%), Positives = 91/143 (63%)
Query: 69 ICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
I N V G++ +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 217 ISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 276
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 277 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 336
Query: 188 MKGYSEEDLRNNVDEFKNLDPTR 210
K +E+ N ++ + DP +
Sbjct: 337 QKKAAEKAATANNEKLRP-DPNK 358
Score = 80 (33.2 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 106 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 149
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 66/142 (46%), Positives = 97/142 (68%)
Query: 38 NHYLWLYHDKTLLYMSNCTAFIQIFVKIKYSI--CMNAVLLGNFTCIAVVFNLRRRLGYH 95
N ++ + +K + +++ Q +K + + C G FTCI V F+L R++GY+
Sbjct: 197 NDLIFEWQEKGPVQVADGLTLPQFILKDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 256
Query: 96 LFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAI 155
L YIPS LIV++SW+SFWI +A PARV LG+T++LT+ TQ++ S+ SLP VSYVKAI
Sbjct: 257 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSLPKVSYVKAI 316
Query: 156 DIWMSSCSVFVFLSLMEFAVVN 177
DIWM+ C +FVF +L+E+A VN
Sbjct: 317 DIWMAVCLLFVFSALLEYAAVN 338
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 288 (106.4 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 61/152 (40%), Positives = 93/152 (61%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + Y + V+ G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +
Sbjct: 245 FSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD 304
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
A ARV LG+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN
Sbjct: 305 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYI 364
Query: 180 M---GPIATK--AMKGYSEEDLRNNVDEFKNL 206
GP K A K + RN D K++
Sbjct: 365 FFGRGPQMQKKLAEKAEKANNDRNKYDGNKSV 396
Score = 80 (33.2 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 142 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 185
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 285 (105.4 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 49/101 (48%), Positives = 76/101 (75%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ +++ F ++R +GY + TY+PS LI ++SW+SFWI +A ARV LGVT++LT+
Sbjct: 229 GSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMT 288
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN
Sbjct: 289 TINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVN 329
Score = 82 (33.9 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 109 LDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLY 152
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 248 (92.4 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 215 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 274
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y + T+ K ++
Sbjct: 275 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNLQTQKAKRKAQFAA 333
Query: 197 RNNVDEFKNLDPTRSRSITIP 217
V K +P + + P
Sbjct: 334 PPTVTISKATEPLEAEIVLHP 354
Score = 96 (38.9 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN + + T+LY T
Sbjct: 90 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLT 141
Score = 36 (17.7 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 210 RSRSITIPQVPMYPTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
+S +T P P+ P F G ID+ N++YW +L
Sbjct: 388 QSTPVTPP--PLSPAF-GGTS---KIDQYSRILFPVAFAGFNLVYWVVYL 431
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 284 (105.0 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 219 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 278
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 279 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 338
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 339 QKKLAEKTAKAKNDRSKS 356
Score = 80 (33.2 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 284 (105.0 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 219 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 278
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 279 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 338
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 339 QKKLAEKTAKAKNDRSKS 356
Score = 80 (33.2 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 284 (105.0 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 219 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 278
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 279 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 338
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 339 QKKLAEKTAKAKNDRSKS 356
Score = 80 (33.2 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 284 (105.0 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 55/124 (44%), Positives = 84/124 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV LG+T++LT+
Sbjct: 228 GAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMT 287
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNN-YMGPIATKAMKGYSEED 195
T +T +++LP + YVKAIDI++ C VFVFL+L+E+A VN + G K KG ++D
Sbjct: 288 TISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQK--KGAGKQD 345
Query: 196 LRNN 199
N
Sbjct: 346 QSAN 349
Score = 80 (33.2 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 108 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 151
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 248 (92.4 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y + T+ K ++
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNLQTQKAKRKAQFAA 343
Query: 197 RNNVDEFKNLDPTRSRSITIP 217
V K +P + + P
Sbjct: 344 PPTVTISKATEPLEAEIVLHP 364
Score = 96 (38.9 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN + + T+LY T
Sbjct: 100 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLT 151
Score = 36 (17.7 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 210 RSRSITIPQVPMYPTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
+S +T P P+ P F G ID+ N++YW +L
Sbjct: 398 QSTPVTPP--PLSPAF-GGTS---KIDQYSRILFPVAFAGFNLVYWVVYL 441
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 240 (89.5 bits), Expect = 8.3e-31, Sum P(3) = 8.3e-31
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G +T + F L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 280 GQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 339
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 340 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 382
Score = 105 (42.0 bits), Expect = 8.3e-31, Sum P(3) = 8.3e-31
Identities = 22/42 (52%), Positives = 23/42 (54%)
Query: 15 NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
NIW PD FF N KK H M+ PN L L D TLLY T
Sbjct: 165 NIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLT 206
Score = 39 (18.8 bits), Expect = 8.3e-31, Sum P(3) = 8.3e-31
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW ++L
Sbjct: 457 IDKMSRIVFPVLFGTFNLVYWATYL 481
>UNIPROTKB|G5E9Z6 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH471069 GO:GO:0006821
UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352
EMBL:AC093745 EMBL:AC095060 EMBL:AC104072 ProteinModelPortal:G5E9Z6
SMR:G5E9Z6 Ensembl:ENST00000515082 ArrayExpress:G5E9Z6 Bgee:G5E9Z6
Uniprot:G5E9Z6
Length = 367
Score = 250 (93.1 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 47/142 (33%), Positives = 86/142 (60%)
Query: 40 YLWLYHDKTLLYMSNCTAFIQIFVKIKYSICMNAVL--LGNFTCIAVVFNLRRRLGYHLF 97
Y+W Y+ + ++ + + + + SI + G +T + F+L+R++GY +
Sbjct: 196 YIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVI 255
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
TY+P + V++S +SFW+ E++PAR GVT++LT+ T + ++ SLP V+Y A+D
Sbjct: 256 QTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDW 315
Query: 158 WMSSCSVFVFLSLMEFAVVNNY 179
+++ C FVF +L+EFA VN +
Sbjct: 316 FIAVCYAFVFSALIEFATVNYF 337
Score = 104 (41.7 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 24/52 (46%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 ILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLT 161
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 250 (93.1 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 45/113 (39%), Positives = 75/113 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++G+ L TYIP + V+++ +SFWI E++PAR G+T++LT+
Sbjct: 224 GEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMT 283
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMK 189
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + A K ++
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELR 336
Score = 91 (37.1 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N K+ H M+ PN + + T+LY T
Sbjct: 99 ILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLT 150
Score = 36 (17.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
IDK N++YW +L
Sbjct: 410 IDKYSRILFPLSFGAFNLVYWIVYL 434
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 241 (89.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 241 (89.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 241 (89.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATYV 479
>MGI|MGI:95615 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 MGI:MGI:95615 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2556 OrthoDB:EOG4X0MSC EMBL:M86568
IPI:IPI00110601 RefSeq:NP_032093.3 UniGene:Mm.102286
UniGene:Mm.447666 ProteinModelPortal:P26049 SMR:P26049
STRING:P26049 PhosphoSite:P26049 PaxDb:P26049 PRIDE:P26049
Ensembl:ENSMUST00000055966 GeneID:14396 KEGG:mmu:14396
InParanoid:P26049 BindingDB:P26049 ChEMBL:CHEMBL3387 NextBio:285931
Bgee:P26049 Genevestigator:P26049 GermOnline:ENSMUSG00000031343
Uniprot:P26049
Length = 492
Score = 241 (89.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 260 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 319
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 320 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 362
Score = 102 (41.0 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 24/53 (45%), Positives = 28/53 (52%)
Query: 6 RILDVNWL--QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+IL +N L IW PD FF N KK H M+ PN L L + TLLY T
Sbjct: 134 KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLT 186
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
+DK + N++YW +++
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATYV 479
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 284 (105.0 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 69 ICMNAVLL-GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTL 127
+ N V G + +++ F L+R +GY + TY+PS LI ++SW+SFWI +A ARV L
Sbjct: 275 VSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 334
Query: 128 GVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
G+T++LT+ T NT +++LP + YVKAID+++ C VFVFL+L+E+A VN +
Sbjct: 335 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQR 394
Query: 188 MKGYSEEDLRNNVDEFKN 205
K +E+ + D K+
Sbjct: 395 QKKLAEKTAKAKNDRSKS 412
Score = 80 (33.2 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD +W PD +F N KK H +++ N + L+ D T+LY
Sbjct: 164 LDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 207
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 241 (89.9 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 337
Score = 99 (39.9 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + + TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLT 161
Score = 37 (18.1 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ N++YW ++L
Sbjct: 421 IDRIARIAFPLLFGTFNLVYWATYL 445
>MGI|MGI:95622 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor,
subunit delta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 MGI:MGI:95622 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN EMBL:AH001900 EMBL:S42882
IPI:IPI00323796 PIR:A36303 PIR:I52630 RefSeq:NP_032098.2
UniGene:Mm.388925 ProteinModelPortal:P22933 SMR:P22933
STRING:P22933 PhosphoSite:P22933 PRIDE:P22933
Ensembl:ENSMUST00000030925 GeneID:14403 KEGG:mmu:14403
InParanoid:P22933 BindingDB:P22933 ChEMBL:CHEMBL3907 NextBio:285959
Bgee:P22933 Genevestigator:P22933 GermOnline:ENSMUSG00000029054
Uniprot:P22933
Length = 449
Score = 263 (97.6 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 54/135 (40%), Positives = 83/135 (61%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 226 MNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGIT 285
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN---NYMGP--IAT 185
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A + +Y
Sbjct: 286 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKKRKAKV 345
Query: 186 KAMKGYSEEDLRNNV 200
K K +E D+RN +
Sbjct: 346 KVTKPRAEMDVRNAI 360
Score = 95 (38.5 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI-K 66
LD ++ +W PD F NAK FH++++ N + L D +LY T+ + + + K
Sbjct: 111 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLAK 170
Query: 67 YSI 69
Y +
Sbjct: 171 YPL 173
>UNIPROTKB|E2RSN3 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:HSDSKYH
EMBL:AAEX03003042 Ensembl:ENSCAFT00000027311 NextBio:20862356
Uniprot:E2RSN3
Length = 550
Score = 249 (92.7 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 48/140 (34%), Positives = 82/140 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 242 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 301
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y + T+ K ++
Sbjct: 302 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNLQTQKAKRRAQNAA 360
Query: 197 RNNVDEFKNLDPTRSRSITI 216
V K +P + + +
Sbjct: 361 SPPVTISKATEPLEAEIVLV 380
Score = 96 (38.9 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN + + T+LY T
Sbjct: 117 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLT 168
Score = 36 (17.7 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 210 RSRSITIPQVPMYPTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
+S +T P P+ P F G ID+ N++YW +L
Sbjct: 497 QSTPVTPP--PLSPAF-GGTS---KIDQYSRILFPVAFAGFNLVYWVVYL 540
>RGD|61901 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor, delta"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 RGD:61901 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN EMBL:L08496 EMBL:BC087714 EMBL:M35162
IPI:IPI00192644 PIR:A34625 RefSeq:NP_058985.1 UniGene:Rn.10927
ProteinModelPortal:P18506 STRING:P18506 Ensembl:ENSRNOT00000022246
GeneID:29689 KEGG:rno:29689 GeneTree:ENSGT00630000089571
InParanoid:P18506 BindingDB:P18506 ChEMBL:CHEMBL337 NextBio:610071
ArrayExpress:P18506 Genevestigator:P18506
GermOnline:ENSRNOG00000016385 Uniprot:P18506
Length = 449
Score = 263 (97.6 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 54/135 (40%), Positives = 83/135 (61%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 226 MNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGIT 285
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN---NYMGP--IAT 185
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A + +Y
Sbjct: 286 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKKRKAKV 345
Query: 186 KAMKGYSEEDLRNNV 200
K K +E D+RN +
Sbjct: 346 KVTKPRAEMDVRNAI 360
Score = 94 (38.1 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 111 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 162
>ZFIN|ZDB-GENE-080303-26 [details] [associations]
symbol:zgc:171544 "zgc:171544" species:7955 "Danio
rerio" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008100 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236
ZFIN:ZDB-GENE-080303-26 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:AL732488
EMBL:BX248124 EMBL:CT573003 IPI:IPI00886548
ProteinModelPortal:F1QZB5 Ensembl:ENSDART00000076322 OMA:GSVANTE
Bgee:F1QZB5 Uniprot:F1QZB5
Length = 447
Score = 239 (89.2 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 48/133 (36%), Positives = 82/133 (61%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+ + F L+R + Y + TY+PS+ +VV+SW+SFWI ++PAR+ +GVT++LT+
Sbjct: 221 GNYPKLIFHFKLKRSILYFILETYVPSSALVVLSWVSFWISQSSVPARICIGVTTVLTMT 280
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN--NYMGPIATKAMKGYSE 193
T ++ SLP + ++KAID+++ C F+F +L+E+AV + P A A Y +
Sbjct: 281 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYAVAHFCTLHQPNAANAYM-YGQ 339
Query: 194 EDLRNNVDEFKNL 206
E ++ DE +
Sbjct: 340 E-MQEREDEMNGI 351
Score = 80 (33.2 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI-K 66
LD ++ +W PD F ++KK H++++ N + ++ + T+LY T + + + K
Sbjct: 101 LDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACSMDLTK 160
Query: 67 YSICMNAVLL 76
Y + +L
Sbjct: 161 YPMDRQTCML 170
Score = 55 (24.4 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 225 FCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
+C E YID ++N+LYWT +L
Sbjct: 411 YCCKVENPHYIDNYSRLTFPLSFVIINLLYWTYYL 445
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 260 (96.6 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 50/118 (42%), Positives = 80/118 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 218 GWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 277
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 278 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLREK 334
Score = 71 (30.1 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 98 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRIT 145
Score = 37 (18.1 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 412 IDKYSRLIFPGTYIFFNLIYWSVF 435
>UNIPROTKB|E1BQL4 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AADN02040874 IPI:IPI00599008
Ensembl:ENSGALT00000001958 Uniprot:E1BQL4
Length = 430
Score = 260 (96.6 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F+LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 202 MNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLGIT 261
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFA 174
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A
Sbjct: 262 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYA 305
Score = 94 (38.1 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 87 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 138
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 260 (96.6 bits), Expect = 5.9e-30, Sum P(3) = 5.9e-30
Identities = 50/118 (42%), Positives = 80/118 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 246 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 305
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 306 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLQEK 362
Score = 73 (30.8 bits), Expect = 5.9e-30, Sum P(3) = 5.9e-30
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 119 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRIT 173
Score = 38 (18.4 bits), Expect = 5.9e-30, Sum P(3) = 5.9e-30
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVF 464
>UNIPROTKB|O14764 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid receptor subunit
delta" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006810 GO:GO:0034707
GO:GO:0005254 Orphanet:307 HOVERGEN:HBG051707 HOGENOM:HOG000231335
EMBL:AF016917 EMBL:AL391845 EMBL:BC033801 IPI:IPI00375475
RefSeq:NP_000806.2 UniGene:Hs.113882 ProteinModelPortal:O14764
SMR:O14764 IntAct:O14764 MINT:MINT-1461496 STRING:O14764
PhosphoSite:O14764 PRIDE:O14764 DNASU:2563 Ensembl:ENST00000378585
GeneID:2563 KEGG:hsa:2563 UCSC:uc001aip.2 CTD:2563
GeneCards:GC01P001950 HGNC:HGNC:4084 MIM:137163 MIM:613060
neXtProt:NX_O14764 Orphanet:36387 Orphanet:1606 PharmGKB:PA28498
eggNOG:NOG308574 InParanoid:O14764 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN PhylomeDB:O14764 BindingDB:O14764
ChEMBL:CHEMBL3591 GenomeRNAi:2563 NextBio:10127 Bgee:O14764
CleanEx:HS_GABRD Genevestigator:O14764 GermOnline:ENSG00000187730
Uniprot:O14764
Length = 452
Score = 261 (96.9 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 53/135 (39%), Positives = 84/135 (62%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F+LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 226 MNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGIT 285
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN---NYMGP--IAT 185
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A + +Y
Sbjct: 286 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKKQKAKV 345
Query: 186 KAMKGYSEEDLRNNV 200
K + +E D+RN +
Sbjct: 346 KVSRPRAEMDVRNAI 360
Score = 94 (38.1 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 111 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 162
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 79/236 (33%), Positives = 121/236 (51%)
Query: 40 YLWLYHDKTLLY--MSNCTAFIQIFVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLF 97
YLW H L +S+ Q+ + C + G ++C+ L+R ++L
Sbjct: 221 YLWKEHSPLQLKVGLSSSLPSFQL-TNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLL 279
Query: 98 HTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDI 157
YIPS ++V++SW+SFW AIPARVTLGVT+LLT+ Q+ LPPVSY+KAID+
Sbjct: 280 QLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDV 339
Query: 158 WMSSCSVFVFLSLMEFAVVN---NYMGPIATKAM--KGYSE----EDLRNNVDE--FKNL 206
W+ +C F+F +L+EFA+VN N G + KA + +E ++L N+V F
Sbjct: 340 WIGACMTFIFCALLEFALVNHIANKQG-VERKARTEREKAEIPLLQNLHNDVPTKVFNQE 398
Query: 207 DPTRSRSITIPQVPMY----PTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSF 258
+ R+ + Q+ + T +I+ +D V NILYW+ F
Sbjct: 399 EKVRTVPLNRRQMNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 263 (97.6 bits), Expect = 9.7e-30, Sum P(3) = 9.7e-30
Identities = 55/135 (40%), Positives = 85/135 (62%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 266 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 325
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + E+ L
Sbjct: 326 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQER-----KEQKL 379
Query: 197 RNNVDEFKNLDPTRS 211
R + L P R+
Sbjct: 380 REKLPCTSGLPPPRT 394
Score = 67 (28.6 bits), Expect = 9.7e-30, Sum P(3) = 9.7e-30
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 193
Score = 40 (19.1 bits), Expect = 9.7e-30, Sum P(3) = 9.7e-30
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 455 IDKYSRIIFPAAYILFNLIYWSIF 478
>UNIPROTKB|A2VE38 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid (GABA) A receptor,
delta" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008098 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01722 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN
GeneTree:ENSGT00630000089571 EMBL:DAAA02043224 EMBL:BC133557
IPI:IPI00710785 RefSeq:NP_001075184.1 UniGene:Bt.25568
Ensembl:ENSBTAT00000011434 GeneID:508711 KEGG:bta:508711
InParanoid:A2VE38 NextBio:20868645 Uniprot:A2VE38
Length = 450
Score = 259 (96.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 54/138 (39%), Positives = 84/138 (60%)
Query: 71 MNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 130
MN G F +++ F+LRR G ++ +Y+PS L+V MSW+SFWI A+PARV+LG+T
Sbjct: 225 MNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGIT 284
Query: 131 SLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN---NYMGPIATKA 187
++LT+ T ++ SLP S +KA+D++ C VFVF +L+E+A + +Y KA
Sbjct: 285 TVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKKQKAKA 344
Query: 188 MKGYSEEDLRNNVDEFKN 205
++ R +D KN
Sbjct: 345 KAKVKVKEQRAEMD-VKN 361
Score = 94 (38.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD F NAK FH++++ N + L D +LY T+ +
Sbjct: 110 LDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 161
>WB|WBGene00021146 [details] [associations]
symbol:lgc-45 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231336 KO:K05397
EMBL:FO081775 PIR:F88103 RefSeq:NP_494579.1 UniGene:Cel.14158
ProteinModelPortal:O44917 SMR:O44917 EnsemblMetazoa:W10G11.16
GeneID:189344 KEGG:cel:CELE_W10G11.16 UCSC:W10G11.16 CTD:189344
WormBase:W10G11.16 eggNOG:NOG308614 InParanoid:O44917 OMA:FTILGHE
NextBio:942068 Uniprot:O44917
Length = 327
Score = 243 (90.6 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 41/114 (35%), Positives = 76/114 (66%)
Query: 60 QIFV-KIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP 118
++++ + + + C N G F+C+ VF L+R +G+H+ TYIP++L ++ SW+ W+
Sbjct: 132 ELYIDRYETTTCPNERKSGAFSCLRAVFRLKRDVGFHIAQTYIPTSLALMFSWVGVWLPE 191
Query: 119 EAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLME 172
E + R+ + +T LLTL+T++ +++ LP VSY+KAID+W + FVF +L++
Sbjct: 192 EFMEGRIGVAITVLLTLSTESAGAREHLPSVSYLKAIDLWFGFITGFVFFTLLQ 245
Score = 101 (40.6 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 13 LQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
L+ IWRPD FF NAK+ FHE++ N + ++ D +LY
Sbjct: 34 LEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 72
>UNIPROTKB|I3LPL5 [details] [associations]
symbol:I3LPL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:CU928257
Ensembl:ENSSSCT00000022596 OMA:LRIMEDG Uniprot:I3LPL5
Length = 355
Score = 241 (89.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 237 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 296
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN +
Sbjct: 297 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF 339
Score = 103 (41.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 112 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 163
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 256 (95.2 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 48/101 (47%), Positives = 72/101 (71%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 209 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 268
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 269 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 67 (28.6 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 89 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 136
Score = 40 (19.1 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 398 IDKYSRIIFPAAYILFNLIYWSIF 421
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 256 (95.2 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 48/101 (47%), Positives = 72/101 (71%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 209 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 268
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 269 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 67 (28.6 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 89 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 136
Score = 40 (19.1 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 398 IDKYSRIIFPAAYILFNLIYWSIF 421
>ZFIN|ZDB-GENE-040724-212 [details] [associations]
symbol:gabrr1 "gamma-aminobutyric acid (GABA)
receptor, rho 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-040724-212 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
OrthoDB:EOG4RJG1G EMBL:BX537249 EMBL:BX248418 IPI:IPI00509581
RefSeq:NP_001020724.1 UniGene:Dr.92000 SMR:Q5TZ16
Ensembl:ENSDART00000012376 GeneID:568984 KEGG:dre:568984
eggNOG:NOG244283 InParanoid:Q5TZ16 OMA:ENIMLRI NextBio:20889441
Uniprot:Q5TZ16
Length = 466
Score = 259 (96.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 50/120 (41%), Positives = 79/120 (65%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 251 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 310
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + + L
Sbjct: 311 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVN-YLSTLQERKERSQNSRQL 369
Score = 70 (29.7 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 131 DGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYSLRVT 178
Score = 39 (18.8 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + NI+YW+ +
Sbjct: 441 IDKYSRVIFPGAYTLFNIIYWSIY 464
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 259 (96.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 50/118 (42%), Positives = 80/118 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 269 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 328
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 329 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKSQEK 385
Score = 73 (30.8 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 142 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRIT 196
Score = 38 (18.4 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 464 IDKYSRLIFPASYIFFNLIYWSVF 487
>UNIPROTKB|P28476 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0007601 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 EMBL:M86868 EMBL:AL121833 EMBL:BC130352
EMBL:BC130354 IPI:IPI00293005 PIR:A38079 RefSeq:NP_002034.3
UniGene:Hs.719891 ProteinModelPortal:P28476 STRING:P28476
PhosphoSite:P28476 DMDM:306526281 PRIDE:P28476 DNASU:2570
Ensembl:ENST00000402938 GeneID:2570 KEGG:hsa:2570 UCSC:uc003pnb.2
GeneCards:GC06M089967 H-InvDB:HIX0200918 HGNC:HGNC:4091
HPA:HPA016467 MIM:137162 neXtProt:NX_P28476 PharmGKB:PA28506
InParanoid:P28476 OMA:GFRIFQN PhylomeDB:P28476 BindingDB:P28476
ChEMBL:CHEMBL2375 ChiTaRS:GABRR2 GenomeRNAi:2570 NextBio:10165
ArrayExpress:P28476 Bgee:P28476 Genevestigator:P28476
GermOnline:ENSG00000111886 Uniprot:P28476
Length = 465
Score = 259 (96.2 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 51/118 (43%), Positives = 79/118 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT+
Sbjct: 246 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMT 305
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSYVKA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 306 TIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLREK 362
Score = 70 (29.7 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 119 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRIT 173
Score = 38 (18.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVF 464
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 259 (96.2 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 50/121 (41%), Positives = 81/121 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 251 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 310
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + + +
Sbjct: 311 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERRERKLRDRAV 369
Query: 197 R 197
R
Sbjct: 370 R 370
Score = 70 (29.7 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 131 DGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVT 178
Score = 38 (18.4 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ +
Sbjct: 451 IDKYSRMIFPGAYIIFNLIYWSVY 474
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 245 (91.3 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 44/111 (39%), Positives = 72/111 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + + KA
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKA 335
Score = 106 (42.4 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN L H+ T+LY T
Sbjct: 100 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLT 151
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 245 (91.3 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 44/111 (39%), Positives = 72/111 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + + KA
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKA 335
Score = 106 (42.4 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN L H+ T+LY T
Sbjct: 100 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLT 151
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 252 (93.8 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 48/118 (40%), Positives = 80/118 (67%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+ ++LT++
Sbjct: 246 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMS 305
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY++A+DI++ VFVFLS++E+A VN Y+ + + + + E+
Sbjct: 306 TIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVN-YLTTLQEQKERKFREK 362
Score = 72 (30.4 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 119 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRIT 173
Score = 42 (19.8 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK V N++YW+ F
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVF 464
>UNIPROTKB|F1ND89 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01671 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:RMMVQLA EMBL:AADN02002380 EMBL:AADN02002378 EMBL:AADN02002379
IPI:IPI00595666 Ensembl:ENSGALT00000025445 Uniprot:F1ND89
Length = 438
Score = 256 (95.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 48/101 (47%), Positives = 72/101 (71%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 227 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 286
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 287 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 327
Score = 67 (28.6 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 107 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 154
Score = 39 (18.8 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 414 IDKYSRIIFPGAYILFNLIYWSIF 437
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 274 (101.5 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 51/104 (49%), Positives = 73/104 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN++ +A R +GY+L YIPS LIVV+SW+SFW+ A PARV LGVT++LT+
Sbjct: 250 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 309
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T + + +LP +SYVK+ID+++ +C V VF SL+E+A V YM
Sbjct: 310 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG-YM 352
Score = 80 (33.2 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 12 WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
+++NIW PD FF N K+ FH + N ++ ++H ++
Sbjct: 134 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSI 171
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 258 (95.9 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 48/101 (47%), Positives = 73/101 (72%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 271 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 330
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 331 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 371
Score = 70 (29.7 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 2 SEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
S + D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 144 SNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRIT 198
Score = 38 (18.4 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK N++YW+ F
Sbjct: 466 IDKYSRLIFPASYIFFNLIYWSVF 489
>FB|FBgn0033558 [details] [associations]
symbol:CG12344 species:7227 "Drosophila melanogaster"
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016935 "glycine-gated chloride channel complex"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 EMBL:AE013599 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 EMBL:AY094938
RefSeq:NP_610619.2 UniGene:Dm.19411 SMR:Q8SWZ1 MINT:MINT-798498
EnsemblMetazoa:FBtr0088246 GeneID:36145 KEGG:dme:Dmel_CG12344
UCSC:CG12344-RA FlyBase:FBgn0033558 eggNOG:NOG293640
InParanoid:Q8SWZ1 OMA:LVTCMLT OrthoDB:EOG4TTF0J GenomeRNAi:36145
NextBio:797075 Uniprot:Q8SWZ1
Length = 449
Score = 278 (102.9 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 51/101 (50%), Positives = 73/101 (72%)
Query: 76 LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTL 135
+GNF+ + V F R++G+HL T+ PS+L+V++SW SFW+ +AIP RVTL VT +LTL
Sbjct: 230 VGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTL 289
Query: 136 ATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
T T + +PPV+YVKA+D+WM+ C + VF +L EF VV
Sbjct: 290 VTMFTGAD--IPPVAYVKALDLWMAGCMLSVFAALAEFVVV 328
Score = 67 (28.6 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 3 EEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
++Y L +N W+PD +F N+K ++ + LY +KT+ Y + A I
Sbjct: 105 DDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAII 161
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 268 (99.4 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 60/156 (38%), Positives = 94/156 (60%)
Query: 66 KYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARV 125
K + C + G ++C+ V L R + L YIPS+++V ++W+S+WI ++ ARV
Sbjct: 238 KNASCTSKTNTGTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARV 297
Query: 126 TLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIAT 185
L + +LLT+ T + +LPPVSY K+IDIW+ +C VF+F SL+E+AVVN Y+G +
Sbjct: 298 PLAIVTLLTMITTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLIEYAVVN-YVGILDE 356
Query: 186 -KAMKGYSEEDLR-NNVDEFKNLDPTRSRSITI-PQ 218
+ MK + R +NV E N + +S+T PQ
Sbjct: 357 HRQMKKAACNRSRLSNVIENDNFGESL-QSLTFSPQ 391
Score = 82 (33.9 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 1 MSEEYR---ILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
+S +YR + V Q++W PD FF+N K +H ++ N +L + D L+Y
Sbjct: 119 LSSDYRNFEFIHVARDQSLWIPDTFFQNEKNGWYHMLNQENRFLKIRSDGKLIY 172
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 274 (101.5 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 51/104 (49%), Positives = 73/104 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN++ +A R +GY+L YIPS LIVV+SW+SFW+ A PARV LGVT++LT+
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T + + +LP +SYVK+ID+++ +C V VF SL+E+A V YM
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG-YM 354
Score = 80 (33.2 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 12 WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
+++NIW PD FF N K+ FH + N ++ ++H ++
Sbjct: 136 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSI 173
>WB|WBGene00009790 [details] [associations]
symbol:lgc-44 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 KO:K05397 EMBL:Z81085 PIR:T22315
RefSeq:NP_505954.2 ProteinModelPortal:P90876 SMR:P90876
PaxDb:P90876 EnsemblMetazoa:F46F3.2 GeneID:179600
KEGG:cel:CELE_F46F3.2 UCSC:F46F3.2 CTD:179600 WormBase:F46F3.2
eggNOG:NOG309025 HOGENOM:HOG000022498 InParanoid:P90876 OMA:HIANTYI
NextBio:906102 Uniprot:P90876
Length = 618
Score = 257 (95.5 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 45/100 (45%), Positives = 68/100 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G ++C+ F + R +GYH+ +TYIP+A+ VV SWIS W+ E + R+ + +T LTL+
Sbjct: 442 GVYSCLEAKFYMHREVGYHIANTYIPTAICVVFSWISVWLPEEFVEGRIFVSLTVFLTLS 501
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
+N +++ LP VSYVKAIDIW S FVFL++++ VV
Sbjct: 502 AENNSAKEELPKVSYVKAIDIWFGFTSTFVFLTMLQALVV 541
Score = 98 (39.6 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 1 MSEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHD 46
+S + D +L+ IWRPD F N+K TFH+++ N YL+++ D
Sbjct: 313 LSRPILVNDYTFLKMIWRPDPIFTNSKYSTFHKVTYLNFYLFIFPD 358
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 257 (95.5 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 50/118 (42%), Positives = 79/118 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 267 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 326
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 327 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLREK 383
Score = 67 (28.6 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 194
Score = 40 (19.1 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIF 479
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 257 (95.5 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 50/118 (42%), Positives = 79/118 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 267 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 326
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 327 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLREK 383
Score = 67 (28.6 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 194
Score = 40 (19.1 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIF 479
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 257 (95.5 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 50/118 (42%), Positives = 79/118 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV LG+T++LT++
Sbjct: 267 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMS 326
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEE 194
T T S+P VSY+KA+DI++ VFVFLS++E+A VN Y+ + + + E+
Sbjct: 327 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN-YLTTVQERKERKLREK 383
Score = 67 (28.6 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L + D +LY T
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVT 194
Score = 40 (19.1 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK + N++YW+ F
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIF 479
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 261 (96.9 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 46/115 (40%), Positives = 76/115 (66%)
Query: 75 LLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLT 134
+ G + + V F+L+R++GY + TYIP + V++S +SFWI E++PAR G+T++LT
Sbjct: 239 ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT 298
Query: 135 LATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMK 189
+ T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + A +A +
Sbjct: 299 MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQAERAKR 353
Score = 91 (37.1 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L +W PD FF+N K+ H M+ PN + + T+LY T
Sbjct: 116 ILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLT 167
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 273 (101.2 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 50/104 (48%), Positives = 73/104 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN++ +A R +GY+L YIPS LIV++SW+SFW+ A PARV LGVT++LT+
Sbjct: 252 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
T + + +LP +SYVK+ID+++ +C V VF SL+E+A V YM
Sbjct: 312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG-YM 354
Score = 80 (33.2 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 12 WLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
+++NIW PD FF N K+ FH + N ++ ++H ++
Sbjct: 136 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSI 173
>RGD|68320 [details] [associations]
symbol:Gabre "gamma-aminobutyric acid (GABA) A receptor, epsilon"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=TAS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008099 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01723 PROSITE:PS00236 RGD:68320 GO:GO:0005886 GO:GO:0042493
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
GO:GO:0006821 HOVERGEN:HBG051707 EMBL:AF255612 EMBL:U92284
IPI:IPI00191361 UniGene:Rn.54455 ProteinModelPortal:Q9ES14
PRIDE:Q9ES14 eggNOG:NOG148905 BindingDB:Q9ES14 ChEMBL:CHEMBL306
ArrayExpress:Q9ES14 Genevestigator:Q9ES14 Uniprot:Q9ES14
Length = 506
Score = 256 (95.2 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 46/102 (45%), Positives = 73/102 (71%)
Query: 76 LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTL 135
+G+F + FN+ RR G+ +F YIPS++ ++SW+SFWIK EA AR ++GV+S+LT+
Sbjct: 262 VGDFMVMTFFFNVSRRFGFIVFQNYIPSSVTTMLSWVSFWIKIEAAAARASVGVSSVLTM 321
Query: 136 ATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
AT T S+++ P VSY+ A+D +++ C V F +L+EF V+N
Sbjct: 322 ATLGTFSRKNFPRVSYLTALDFYIAICFVLCFCTLLEFTVLN 363
Score = 93 (37.8 bits), Expect = 7.1e-29, Sum P(2) = 7.1e-29
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 4 EYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
E IL N + +W PD FF+N+K+ ++++IPN ++ D +LY T
Sbjct: 139 ETLILHGNVVSQLWIPDTFFRNSKRTQEYDITIPNQMALIHKDGKVLYTVRMT 191
>WB|WBGene00018880 [details] [associations]
symbol:acc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 EMBL:FO080828
EMBL:AY849796 PIR:T16458 RefSeq:NP_508810.2 UniGene:Cel.25513
ProteinModelPortal:G5EDN0 SMR:G5EDN0 EnsemblMetazoa:F55D10.5
GeneID:186307 KEGG:cel:CELE_F55D10.5 CTD:186307 WormBase:F55D10.5
OMA:KMIPART NextBio:931382 Uniprot:G5EDN0
Length = 517
Score = 252 (93.8 bits), Expect = 9.2e-29, Sum P(3) = 9.2e-29
Identities = 57/167 (34%), Positives = 86/167 (51%)
Query: 62 FVKIKYSICMNAVLL--GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
FV YS + + G + + + F RR G+++F YIP+ L + +SWISF + P+
Sbjct: 242 FVMSNYSTSLKHEIYPAGVWNELTMTFVFSRRYGWYIFQAYIPTYLTIFISWISFCLGPK 301
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
IPAR LGV SLL L Q ++LP VSYVKA+D+WM C FVF SL+E A++ +
Sbjct: 302 MIPARTMLGVNSLLALTFQFGNIMRNLPRVSYVKALDVWMLVCLTFVFCSLLELAIIGSM 361
Query: 180 MGPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSITIPQVPMYPTFC 226
+ + ++D + + T S ++ P P C
Sbjct: 362 GARSENRQAQQQKQQDEEATKHQKGRENSTCSHLMSPSSCPNSPRIC 408
Score = 70 (29.7 bits), Expect = 9.2e-29, Sum P(3) = 9.2e-29
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 4 EYRI-LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
+Y + L+ L IW+P+ F N+K H+ N +L +Y + T+
Sbjct: 133 KYNLSLNSEILDQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV 179
Score = 43 (20.2 bits), Expect = 9.2e-29, Sum P(3) = 9.2e-29
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ + NI+YWT +L
Sbjct: 489 IDRLSMIMFPGLFTLFNIIYWTYYL 513
>WB|WBGene00013914 [details] [associations]
symbol:lgc-37 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:Z93372 KO:K05175
GeneTree:ENSGT00540000070314 EMBL:Z93397 HSSP:P23415 PIR:T18791
RefSeq:NP_499662.2 ProteinModelPortal:G5ECN1 SMR:G5ECN1
IntAct:G5ECN1 EnsemblMetazoa:ZC482.5 GeneID:176694
KEGG:cel:CELE_ZC482.5 CTD:176694 WormBase:ZC482.5 OMA:NIAGGLY
NextBio:893624 Uniprot:G5ECN1
Length = 483
Score = 246 (91.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 43/100 (43%), Positives = 71/100 (71%)
Query: 78 NFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLAT 137
N + + V F L+R+ GY++ Y P L+VVMSW+SFWI EA PARV+LG+ ++L+++T
Sbjct: 241 NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST 300
Query: 138 QNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
+ LP VS+ A+D+++ +C VF+F +++E+AV+N
Sbjct: 301 IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVIN 340
Score = 72 (30.4 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 13 LQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHD------KTLLYMSNCTAFIQIF 62
L++IW PD + +N +K H +++PN + D + L S C F++ F
Sbjct: 124 LKDIWIPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVSQRLTIRSRCQMFLKKF 179
Score = 44 (20.5 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 224 TFCNG--REIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
T NG E+ ID + N+ YW ++L
Sbjct: 428 TLRNGDPAEVVNKIDNFSKLAFPTLYIIFNVFYWVAYL 465
Score = 37 (18.1 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 183 IATKAMKGYSEEDLRNNVDEFKNLD-PT 209
IA K ++ ++ N +D F L PT
Sbjct: 424 IAKKTLRNGDPAEVVNKIDNFSKLAFPT 451
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 249 (92.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 46/101 (45%), Positives = 72/101 (71%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+ ++LT++
Sbjct: 246 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMS 305
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY++A+DI++ VFVFLS++E+A VN
Sbjct: 306 TIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVN 346
Score = 69 (29.3 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N L ++ D +LY T
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRIT 173
Score = 42 (19.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSF 258
IDK V N++YW+ F
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVF 464
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 234 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 293
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 294 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 345
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 346 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 381
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 109 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 234 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 293
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 294 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 345
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 346 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 381
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 109 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 160
>UNIPROTKB|E1C7Q7 [details] [associations]
symbol:E1C7Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AADN02046491 EMBL:AADN02046492 EMBL:AADN02046493
EMBL:AADN02046494 EMBL:AADN02046495 IPI:IPI00602664
ProteinModelPortal:E1C7Q7 Ensembl:ENSGALT00000011429 OMA:VKNPYHI
Uniprot:E1C7Q7
Length = 437
Score = 235 (87.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 41/102 (40%), Positives = 70/102 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F L+R + Y + TY+PS L+VV+SW+SFWI ++PAR+ +GVT++LT+
Sbjct: 223 GRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIGVTTVLTMT 282
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T ++ SLP + ++KAID+++ C F+F +L+E+AV +
Sbjct: 283 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVAH 324
Score = 84 (34.6 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFVKI-K 66
LD ++ +W PD F ++KK H++++ N + +Y + T+LY T + + + K
Sbjct: 103 LDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIRITTTVACSMDLTK 162
Query: 67 Y 67
Y
Sbjct: 163 Y 163
Score = 40 (19.1 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 234 YIDKXXXXXXXXXXXVLNILYWTSFL 259
+ID ++N+ YW +L
Sbjct: 410 HIDNYARFSFPLSFIIINVFYWVYYL 435
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 346
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 347 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 382
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 346
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 347 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 382
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 346
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 347 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 382
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 242 (90.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 56/156 (35%), Positives = 91/156 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + F+L+R++GY + TY+P + V++S +SFW+ E++PAR GVT++LT+
Sbjct: 235 GEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT 294
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP V+Y A+D +++ C FVF +L+EFA VN + TK +GY+ D
Sbjct: 295 TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF-----TK--RGYAW-DG 346
Query: 197 RNNVDEF--KNLDPTRSRSITI-PQVPMY-PTFCNG 228
++ V E K DP ++ T P Y P G
Sbjct: 347 KSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARG 382
Score = 103 (41.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
+L +N L IW PD FF N KK H M++PN L + D TLLY T
Sbjct: 110 VLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLT 161
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 247 (92.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL 196
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y + T+ K ++
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNLQTQKAKRKAQIAA 343
Query: 197 RNNVDEFKNLDPTRSRSITIP 217
V K +P + + P
Sbjct: 344 SPPVTIAKATEPLEAEIVLHP 364
Score = 96 (38.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN + + T+LY T
Sbjct: 100 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLT 151
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 245 (91.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 44/111 (39%), Positives = 72/111 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + + KA
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKA 335
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN L + T+LY T
Sbjct: 100 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLT 151
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 245 (91.3 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 44/111 (39%), Positives = 72/111 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 224 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 283
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKA 187
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + + KA
Sbjct: 284 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKA 334
Score = 97 (39.2 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN L + T+LY T
Sbjct: 99 ILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLT 150
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 248 (92.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 44/113 (38%), Positives = 73/113 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 225 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 284
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMK 189
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN + +AM+
Sbjct: 285 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQRAMR 337
Score = 94 (38.1 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
IL +N L IW PD FF+N KK H M+ PN + + T+LY T
Sbjct: 100 ILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLT 151
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 246 (91.7 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 45/113 (39%), Positives = 73/113 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + V F+L+R++GY + Y P + V++S +SFWI E++PAR G+T++LT+
Sbjct: 212 GEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT 271
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMK 189
T + ++ SLP VSY A+D +++ C FVF +L+EFA VN Y + T+ K
Sbjct: 272 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVN-YFTNLQTQKAK 323
Score = 94 (38.1 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 7 ILDVNWLQ--NIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
IL +N L IW PD FF+N KK H M+ PN + + T+LY
Sbjct: 91 ILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILY 137
>FB|FBgn0030707 [details] [associations]
symbol:CG8916 species:7227 "Drosophila melanogaster"
[GO:0004890 "GABA-A receptor activity" evidence=ISS] [GO:0006811
"ion transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 KO:K05175
GeneTree:ENSGT00540000070314 UniGene:Dm.26639 GeneID:32553
KEGG:dme:Dmel_CG8916 FlyBase:FBgn0030707 GenomeRNAi:32553
NextBio:779103 EMBL:BT022901 RefSeq:NP_573090.3 SMR:Q9VXL9
EnsemblMetazoa:FBtr0301232 UCSC:CG8916-RA InParanoid:Q9VXL9
OMA:ATCPMEL OrthoDB:EOG4573P3 Uniprot:Q9VXL9
Length = 612
Score = 231 (86.4 bits), Expect = 4.4e-28, Sum P(3) = 4.4e-28
Identities = 46/103 (44%), Positives = 67/103 (65%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G+F+ + V FNL+R GY L Y+P LIVV+SW+SFWI EA RV+L VTS+LTL+
Sbjct: 300 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLS 359
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T + S+ LP V Y A+D ++ ++ +L+EFA V+ +
Sbjct: 360 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 402
Score = 92 (37.4 bits), Expect = 4.4e-28, Sum P(3) = 4.4e-28
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
L + L IWRPD +F N K H +++PN L L + +LY T
Sbjct: 180 LSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLT 228
Score = 42 (19.8 bits), Expect = 4.4e-28, Sum P(3) = 4.4e-28
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 226 CNGREIALYIDKXXXXXXXXXXXVLNILYWTSF 258
C ++L ID+ LN+LYW ++
Sbjct: 567 CYVNSVSL-IDRVARIAFPMSFAFLNLLYWWAY 598
>WB|WBGene00001592 [details] [associations]
symbol:glc-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886
GO:GO:0009792 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706
HOGENOM:HOG000231336 EMBL:U14525 EMBL:FO080262 PIR:S50865
RefSeq:NP_491470.1 UniGene:Cel.19753 ProteinModelPortal:Q17328
SMR:Q17328 DIP:DIP-27494N MINT:MINT-1047253 PaxDb:Q17328
EnsemblMetazoa:F25F8.2 GeneID:172103 KEGG:cel:CELE_F25F8.2
UCSC:F25F8.2 CTD:172103 WormBase:F25F8.2 InParanoid:Q17328
KO:K05273 OMA:NIMIRML BindingDB:Q17328 ChEMBL:CHEMBL5527
DrugBank:DB00602 NextBio:874023 Uniprot:Q17328
Length = 434
Score = 260 (96.6 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 44/108 (40%), Positives = 69/108 (63%)
Query: 70 CMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGV 129
C + G++ C+ + +R+ Y+L Y P+ +IV++SW+SFWI + RV LGV
Sbjct: 223 CTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGV 282
Query: 130 TSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T+LLT+ T + LPPVSYVK +D+W+ +C FVF +L+E+A V+
Sbjct: 283 TTLLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVS 330
Score = 76 (31.8 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 14 QNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMS------NCTAFIQIFVKIKY 67
+++W PD FF K H + + N +L +Y D +LY S +C +Q++ + Y
Sbjct: 114 KSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLY-PLDY 172
Query: 68 SIC 70
C
Sbjct: 173 QSC 175
>WB|WBGene00017314 [details] [associations]
symbol:lgc-39 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080529 GeneTree:ENSGT00540000070314
PIR:T32486 RefSeq:NP_504821.3 ProteinModelPortal:O17402 SMR:O17402
IntAct:O17402 EnsemblMetazoa:F09G2.5 GeneID:184265
KEGG:cel:CELE_F09G2.5 UCSC:F09G2.5 CTD:184265 WormBase:F09G2.5
eggNOG:NOG274676 HOGENOM:HOG000021541 InParanoid:O17402 OMA:LAHNCTH
NextBio:924130 Uniprot:O17402
Length = 563
Score = 269 (99.8 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 56/155 (36%), Positives = 91/155 (58%)
Query: 79 FTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQ 138
++CI ++R + +H+ TYIP+ ++V +SW+SFW+ P A PAR++L +TSLLTL T
Sbjct: 323 WSCIQGYIVMKRLVLFHIIQTYIPTGMLVSISWMSFWLDPRASPARISLTITSLLTLTTM 382
Query: 139 NTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDL-- 196
+ ++Q LP VSY+KA+DIW++ +FL L+E++ V+ YM TK S ++
Sbjct: 383 SNGARQDLPQVSYIKALDIWLTFSQALIFLVLLEYSFVSYYM----TKRTTDCSHRNMFY 438
Query: 197 RNNVDEFKNLDPTRSRSITIPQVPMYPTFCNGREI 231
V E K + R +SI P+ G ++
Sbjct: 439 EERVQECKREEKAR-KSIVNNNKPVIANNTEGSDL 472
Score = 74 (31.1 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 16 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHD----KTL-LYMS-NCTAFIQIFVKIKYSI 69
IW PD +F N+K E++ PN + +Y D KT+ L ++ +C +++F + Y
Sbjct: 203 IWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDGLIFKTMRLDVTLSCMMDLKLF-PLDYQE 261
Query: 70 CMNAVLLGNFTCIAVVFNLRRR 91
C + + +F I + NL R
Sbjct: 262 C--PLTIQSFAYIEQIVNLTWR 281
>UNIPROTKB|E5RI57 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00980228 ProteinModelPortal:E5RI57 SMR:E5RI57
Ensembl:ENST00000519598 ArrayExpress:E5RI57 Bgee:E5RI57
Uniprot:E5RI57
Length = 349
Score = 246 (91.7 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T S+ SLP + ++KAID+++ C FVF +L+E+AV +
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAH 328
Score = 82 (33.9 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|E2RS87 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
CTD:2568 KO:K05189 OMA:ISESDMD EMBL:AAEX03003017 RefSeq:XP_546242.3
ProteinModelPortal:E2RS87 Ensembl:ENSCAFT00000026815 GeneID:489124
KEGG:cfa:489124 NextBio:20862340 Uniprot:E2RS87
Length = 440
Score = 252 (93.8 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 51/131 (38%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G S+E
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKD-RGTSKE 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 VEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 254 (94.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 47/103 (45%), Positives = 75/103 (72%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + + TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 257 GWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 316
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNY 179
T T S+P VSYVKA+DI++ + +FVFLS++E+A VN +
Sbjct: 317 TIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYF 359
Score = 82 (33.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 6 RILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
R D ++ IW PD FF ++K+ H+ ++ N L ++ D +LY T
Sbjct: 135 RTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRIT 185
>UNIPROTKB|F1PHI6 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AAEX03002173
Ensembl:ENSCAFT00000015775 OMA:HERINLH Uniprot:F1PHI6
Length = 277
Score = 289 (106.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 54/113 (47%), Positives = 78/113 (69%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F L RR+GY TYIP L VV+SW+SFWIK +A PAR LG+T++LT+
Sbjct: 48 GDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMT 107
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMG---PIATK 186
T +T ++ SLP VSYV A+D++++ C +FVF +LME+A +N Y P TK
Sbjct: 108 TLSTIARNSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPTTTK 160
Score = 36 (17.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 233 LYIDKXXXXXXXXXXXVLNILYWTSFL 259
L +D + N++YW +L
Sbjct: 249 LELDSYSRVFFPTSFLLFNLVYWVGYL 275
>RGD|621564 [details] [associations]
symbol:Gabrr3 "gamma-aminobutyric acid (GABA) A receptor, rho 3"
species:10116 "Rattus norvegicus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 RGD:621564 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 CTD:200959 EMBL:D50671 IPI:IPI00199472 PIR:S65756
RefSeq:NP_620252.1 UniGene:Rn.10670 ProteinModelPortal:P50573
Ensembl:ENSRNOT00000002281 GeneID:192258 KEGG:rno:192258
UCSC:RGD:621564 InParanoid:P50573 OMA:MDFTMTF OrthoDB:EOG41G343
BindingDB:P50573 ChEMBL:CHEMBL5454 NextBio:622926
Genevestigator:P50573 GermOnline:ENSRNOG00000001679 Uniprot:P50573
Length = 464
Score = 256 (95.2 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 51/126 (40%), Positives = 84/126 (66%)
Query: 86 FNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQS 145
F LRR + + + TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++T T S
Sbjct: 258 FVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIVTGVSAS 317
Query: 146 LPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGPIATKAMKGYSEEDLRNNVDEFKN 205
+P VSYVKA+D++M S+FVFLS++E+A VN Y+ + + + + + R + N
Sbjct: 318 MPQVSYVKAVDVYMWVSSLFVFLSVIEYAAVN-YLTTV-----EEWKQLNRRGKISGMYN 371
Query: 206 LDPTRS 211
+D ++
Sbjct: 372 IDAVQA 377
Score = 79 (32.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFV 63
D +Q IW PD FF ++K+ H+ ++ N L ++ D +L+ T F+
Sbjct: 129 DRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAMCFM 183
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 251 (93.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 50/131 (38%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI E++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G +++
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKD-RGPAKD 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 SEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 251 (93.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 50/131 (38%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI E++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G +++
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKD-RGPAKD 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 SEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|F6XRX3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 Ensembl:ENSCAFT00000030427
EMBL:AAEX03027062 Uniprot:F6XRX3
Length = 643
Score = 219 (82.2 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 43/101 (42%), Positives = 67/101 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F ++R + +L Y P+ L V+SWISFW+ E+ ARVT+G+TS+L L
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
N+ + LP V+ +KAIDI+M C +FVFLSL+E+ +N
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLLEYVYIN 350
Score = 97 (39.2 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD L+ +W PDC+F N+K H++++ N L+ D T+ Y
Sbjct: 130 LDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRY 173
Score = 46 (21.3 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 160 SSCSVFVFLSLME-FAVVNNYMGPIATKAMKGYSEEDLRNNVDEFKNLDPTR-SRSITIP 217
+SCS+ SL + V + Y+ K ++ Y + R N +F L+ + S S +
Sbjct: 535 ASCSLDEIRSLPDDIRVESGYLD--LEKQLR-YDLYNWRPNAKKFMRLNRRKDSNSESDD 591
Query: 218 QVPMYP--TFCNGREIALY-------IDKXXXXXXXXXXXVLNILYWTSFL 259
P P +F G L+ +DK V NI+YW L
Sbjct: 592 SCPPSPGCSFTEGFSSKLFDPDYVPKVDKWSRILFPLAFVVFNIVYWAYHL 642
>UNIPROTKB|E2QVJ3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 PANTHER:PTHR18945:SF87
Ensembl:ENSCAFT00000030427 Uniprot:E2QVJ3
Length = 649
Score = 219 (82.2 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 43/101 (42%), Positives = 67/101 (66%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G++ + + F ++R + +L Y P+ L V+SWISFW+ E+ ARVT+G+TS+L L
Sbjct: 250 GSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARVTVGLTSMLILN 309
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
N+ + LP V+ +KAIDI+M C +FVFLSL+E+ +N
Sbjct: 310 AINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLLEYVYIN 350
Score = 97 (39.2 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
LD L+ +W PDC+F N+K H++++ N L+ D T+ Y
Sbjct: 130 LDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRY 173
Score = 46 (21.3 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 160 SSCSVFVFLSLME-FAVVNNYMGPIATKAMKGYSEEDLRNNVDEFKNLDPTR-SRSITIP 217
+SCS+ SL + V + Y+ K ++ Y + R N +F L+ + S S +
Sbjct: 541 ASCSLDEIRSLPDDIRVESGYLD--LEKQLR-YDLYNWRPNAKKFMRLNRRKDSNSESDD 597
Query: 218 QVPMYP--TFCNGREIALY-------IDKXXXXXXXXXXXVLNILYWTSFL 259
P P +F G L+ +DK V NI+YW L
Sbjct: 598 SCPPSPGCSFTEGFSSKLFDPDYVPKVDKWSRILFPLAFVVFNIVYWAYHL 648
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 258 (95.9 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 48/101 (47%), Positives = 73/101 (72%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + L TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 209 GWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 268
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T T S+P VSY+KA+DI++ VFVFLS++E+A VN
Sbjct: 269 TIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN 309
Score = 72 (30.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
D ++ IW PD FF ++K+ H+ + N + +Y D +LY T
Sbjct: 89 DGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLRVT 136
>FB|FBgn0036727 [details] [associations]
symbol:CG7589 species:7227 "Drosophila melanogaster"
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0006911
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 EMBL:BT022869 EMBL:BT022900
RefSeq:NP_648984.2 UniGene:Dm.27164 SMR:Q9VVH4
EnsemblMetazoa:FBtr0075221 EnsemblMetazoa:FBtr0333690 GeneID:39949
KEGG:dme:Dmel_CG7589 UCSC:CG7589-RA FlyBase:FBgn0036727
InParanoid:Q9VVH4 OMA:ASPPRIM OrthoDB:EOG4GMSC8 GenomeRNAi:39949
NextBio:816227 Uniprot:Q9VVH4
Length = 509
Score = 258 (95.9 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 41/101 (40%), Positives = 71/101 (70%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN++ ++ NL+R +G++L Y+PS +IV +SW+SFW++ +A P R+ LG +++L+
Sbjct: 252 GNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFI 311
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T ++ ++LP VSY+K ++W C+ F+F SL+EFA VN
Sbjct: 312 TLSSSQSKNLPKVSYIKVSEVWFLGCTFFIFGSLVEFAFVN 352
Score = 56 (24.8 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 223 PTFCN--GREIALYIDKXXXXXXXXXXXVLNILYWT 256
PTF +EIA++ID+ N LYWT
Sbjct: 469 PTFTTMTPQEIAMWIDRRSRFLFPAMFLAFNALYWT 504
Score = 37 (18.1 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 14 QNIWRPDCFFKNAKK 28
+ +W P FF N ++
Sbjct: 130 ERLWLPHIFFANERE 144
>WB|WBGene00006784 [details] [associations]
symbol:unc-49 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0043058 "regulation of backward locomotion" evidence=IMP]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0031594
GO:GO:0007626 GO:GO:0043058 GeneTree:ENSGT00630000089685
EMBL:Z50016 UniGene:Cel.18075 GeneID:176472 KEGG:cel:CELE_T21C12.1
CTD:176472 NextBio:892718 UCSC:T21C12.1b RefSeq:NP_001022781.2
ProteinModelPortal:Q22637 SMR:Q22637 PRIDE:Q22637
EnsemblMetazoa:T21C12.1a WormBase:T21C12.1a InParanoid:Q22637
ArrayExpress:Q22637 Uniprot:Q22637
Length = 1095
Score = 282 (104.3 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 65/214 (30%), Positives = 115/214 (53%)
Query: 1 MSEEYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQ 60
M ++ L++ +++ PD F N + + I +++ H+K + +
Sbjct: 176 MDSQHCKLEIESCKSLCSPDIFSPNGYSI----LDI----MYVSHEKKSVSTESYELPQF 227
Query: 61 IFVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEA 120
+ IK + G ++ + F +R +G+++ Y+PS LIVV+SW+SFW+ +A
Sbjct: 228 VLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFWLSRDA 287
Query: 121 IPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYM 180
PARV LGVT++LT+ T T + S+P VSYVK+IDI++ C + VF SL+E+A V Y+
Sbjct: 288 TPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAAVG-YI 346
Query: 181 GPIATKAMKGYSEEDLRNNVDEFKNLDPTRSRSI 214
K ++ E + + ++L P R+ S+
Sbjct: 347 SK-RMKLVRARKESRMLTPLPHLESLPPKRTLSV 379
Score = 261 (96.9 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 55/135 (40%), Positives = 85/135 (62%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + +A+ L R +G++ + IPS LIV +SW+SFW+ EA PARV LGVT++LT+
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVNNYMGP---IATKAMKGYSE 193
T T + S+P VSYVK +D++++ C V VF SL+E+A+V+ YM + + + +E
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVS-YMNKRLVLRREKRRKAAE 619
Query: 194 EDLRNNVDEFKNLDP 208
+ RN + F N P
Sbjct: 620 QQQRNEMPMF-NASP 633
Score = 217 (81.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 41/115 (35%), Positives = 70/115 (60%)
Query: 62 FVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAI 121
F KI + + G ++ + V F R G++ + P++L+VV+SWISFWI ++
Sbjct: 871 FTKICQKRTLASTSSGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSA 930
Query: 122 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
P+R +G ++LT T + + LPPV+YVKA+D+++ C + V L+L+E+A V
Sbjct: 931 PSRTLIGTMTVLTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALIEYACV 985
Score = 86 (35.3 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 10 VNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMS 53
V++L +W+PD FF N KK FH + N +L + D T+ Y S
Sbjct: 116 VDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTV-YTS 158
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 248 (92.4 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 49/131 (37%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G +++
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKD-RGPAKD 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 SEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|F1LP68 [details] [associations]
symbol:Gabre "Gamma-aminobutyric acid receptor subunit
epsilon" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008099 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236
RGD:68320 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00540000070314
IPI:IPI01016305 Ensembl:ENSRNOT00000039949 ArrayExpress:F1LP68
Uniprot:F1LP68
Length = 914
Score = 250 (93.1 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 47/115 (40%), Positives = 76/115 (66%)
Query: 63 VKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIP 122
V ++ + N +F + FN+ RR G+ +F YIPS++ ++SW+SFWIK EA
Sbjct: 659 VNVRTKVIFNPFC--DFMVMTFFFNVSRRFGFIVFQNYIPSSVTTMLSWVSFWIKIEAAA 716
Query: 123 ARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
AR ++GV+S+LT+AT T S+++ P VSY+ A+D +++ C V F +L+EF V+N
Sbjct: 717 ARASVGVSSVLTMATLGTFSRKNFPRVSYLTALDFYIAICFVLCFCTLLEFTVLN 771
Score = 93 (37.8 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 4 EYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
E IL N + +W PD FF+N+K+ ++++IPN ++ D +LY T
Sbjct: 547 ETLILHGNVVSQLWIPDTFFRNSKRTQEYDITIPNQMALIHKDGKVLYTVRMT 599
>UNIPROTKB|O00591 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:U95367 EMBL:AF009702
EMBL:AF009694 EMBL:AF009695 EMBL:AF009696 EMBL:AF009697
EMBL:AF009698 EMBL:AF009699 EMBL:AF009700 EMBL:AF009701
EMBL:AK292901 EMBL:BC074810 EMBL:BC074865 EMBL:BC109105
EMBL:BC109106 IPI:IPI00012181 RefSeq:NP_055026.1 UniGene:Hs.26225
ProteinModelPortal:O00591 SMR:O00591 STRING:O00591
PhosphoSite:O00591 PaxDb:O00591 PRIDE:O00591
Ensembl:ENST00000265294 Ensembl:ENST00000518525 GeneID:2568
KEGG:hsa:2568 UCSC:uc003mau.3 GeneCards:GC05P170143 HGNC:HGNC:4089
HPA:CAB014883 MIM:602729 neXtProt:NX_O00591 PharmGKB:PA28503
InParanoid:O00591 PhylomeDB:O00591 BindingDB:O00591
ChEMBL:CHEMBL3506 GenomeRNAi:2568 NextBio:10157 ArrayExpress:O00591
Bgee:O00591 CleanEx:HS_GABRP Genevestigator:O00591
GermOnline:ENSG00000094755 Uniprot:O00591
Length = 440
Score = 247 (92.0 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 48/120 (40%), Positives = 82/120 (68%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F LRR + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G ++E
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKD-RGTTKE 345
Score = 82 (33.9 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|F1NHG7 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:AADN02032647 EMBL:AADN02032648
EMBL:AADN02032649 EMBL:AADN02032650 EMBL:AADN02032651
IPI:IPI00576866 Ensembl:ENSGALT00000023288 OMA:ASGMYNI
Uniprot:F1NHG7
Length = 427
Score = 250 (93.1 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 56/164 (34%), Positives = 98/164 (59%)
Query: 42 WLYHDKTLL---YMSNCTAFIQIFVKIKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFH 98
W + +++L ++S FI+ F + + G + + + F LRR + + +
Sbjct: 174 WKHGNESLSTDEHISLSQFFIEEF-SASSGLAFYSSTAGWYNRLFINFALRRHIFFFVLQ 232
Query: 99 TYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIW 158
+Y P+ L+V++SW+SFWI A+PARV+LG+T++LT++T T S+P VSY+KA+D++
Sbjct: 233 SYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYIKAVDVY 292
Query: 159 MSSCSVFVFLSLMEFAVVNNYMGPIAT-KAMKGYSEEDLRNNVD 201
+ +FVFLS++E+A VN Y+ I K +K + N+D
Sbjct: 293 LWISFLFVFLSVIEYAAVN-YLTTIEERKQLKKRGKASGMYNID 335
Score = 76 (31.8 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 51
D ++ IW PD FF ++K+ H+ ++ N L +Y D +L+
Sbjct: 89 DGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLF 131
>WB|WBGene00003386 [details] [associations]
symbol:mod-1 species:6239 "Caenorhabditis elegans"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IDA] [GO:0007210 "serotonin receptor
signaling pathway" evidence=IMP;IDA] [GO:0042595 "behavioral
response to starvation" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0004993 "serotonin receptor activity" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005887
GO:GO:0004993 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0005254
GO:GO:0042595 GeneTree:ENSGT00540000070314 EMBL:FO081551
HOGENOM:HOG000016259 UniGene:Cel.8029 GeneID:179269
KEGG:cel:CELE_K06C4.6 CTD:179269 UCSC:K06C4.6a NextBio:904636
EMBL:AF303088 RefSeq:NP_741580.1 ProteinModelPortal:Q9GQ00
SMR:Q9GQ00 TCDB:1.A.9.6.1 EnsemblMetazoa:K06C4.6a.1
EnsemblMetazoa:K06C4.6a.2 WormBase:K06C4.6a InParanoid:Q9GQ00
OMA:NITMETR ArrayExpress:Q9GQ00 Uniprot:Q9GQ00
Length = 489
Score = 245 (91.3 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 47/117 (40%), Positives = 75/117 (64%)
Query: 62 FVKIKYSICMNAVLLGN--FTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPE 119
F + YS +L N + + V F +RR G+++ Y+P+ L +++SW+SF ++P+
Sbjct: 207 FDMVHYSTKKETLLYPNGYWDQLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCMEPK 266
Query: 120 AIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV 176
A+PAR T+G++SLL L Q ++LP VSYVKA+D+WM C FVF +++E A V
Sbjct: 267 ALPARTTVGISSLLALTFQFGNILKNLPRVSYVKAMDVWMLGCISFVFGTMVELAFV 323
Score = 57 (25.1 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
++ L IW P+ N+K+ T H N + LY + T+
Sbjct: 106 METRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTV 147
Score = 44 (20.5 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 220 PMYPTFCNGREIALYIDKXXXXXXXXXXXVLNILYWTSFL 259
P P+ C R +DK + N++YW +L
Sbjct: 441 PPPPSGCLARFHPEAVDKFSIVAFPLAFTMFNLVYWWHYL 480
>UNIPROTKB|E9PSQ4 [details] [associations]
symbol:Gabre "Gamma-aminobutyric acid receptor subunit
epsilon" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008099 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236
RGD:68320 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GeneTree:ENSGT00540000070314
IPI:IPI00212045 Ensembl:ENSRNOT00000022431 ArrayExpress:E9PSQ4
Uniprot:E9PSQ4
Length = 989
Score = 249 (92.7 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 45/100 (45%), Positives = 71/100 (71%)
Query: 78 NFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLAT 137
+F + FN+ RR G+ +F YIPS++ ++SW+SFWIK EA AR ++GV+S+LT+AT
Sbjct: 747 DFMVMTFFFNVSRRFGFIVFQNYIPSSVTTMLSWVSFWIKIEAAAARASVGVSSVLTMAT 806
Query: 138 QNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T S+++ P VSY+ A+D +++ C V F +L+EF V+N
Sbjct: 807 LGTFSRKNFPRVSYLTALDFYIAICFVLCFCTLLEFTVLN 846
Score = 93 (37.8 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 4 EYRILDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCT 56
E IL N + +W PD FF+N+K+ ++++IPN ++ D +LY T
Sbjct: 622 ETLILHGNVVSQLWIPDTFFRNSKRTQEYDITIPNQMALIHKDGKVLYTVRMT 674
>UNIPROTKB|Q5EA06 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 HSSP:P23415
GeneTree:ENSGT00630000089571 EMBL:BT020763 IPI:IPI00707024
RefSeq:NP_001015618.1 UniGene:Bt.25960 ProteinModelPortal:Q5EA06
Ensembl:ENSBTAT00000003604 GeneID:517459 KEGG:bta:517459 CTD:2568
eggNOG:NOG255582 InParanoid:Q5EA06 KO:K05189 OMA:ISESDMD
OrthoDB:EOG4N04F2 NextBio:20872445 Uniprot:Q5EA06
Length = 440
Score = 245 (91.3 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 49/131 (37%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F L+R + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G ++E
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKD-RGKAKE 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 VEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>UNIPROTKB|F1RRX8 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
KO:K05189 OMA:ISESDMD EMBL:CU856091 RefSeq:XP_003134108.1
Ensembl:ENSSSCT00000026800 GeneID:100525792 KEGG:ssc:100525792
Uniprot:F1RRX8
Length = 440
Score = 245 (91.3 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 49/131 (37%), Positives = 85/131 (64%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
GN+T + + F L+R + Y + TY+PS +VV+SW+SFWI +++PAR +GVT++L++
Sbjct: 227 GNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMT 286
Query: 137 TQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFAVVN-NYMGPIATKAMKGYSEE 194
T S+ SLP + ++KAID+++ C FVF +L+E+AV + + + +A K +G ++E
Sbjct: 287 TLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKD-RGKAKE 345
Query: 195 DLRNNVDEFKN 205
N+ N
Sbjct: 346 VEEVNITNIIN 356
Score = 82 (33.9 bits), Expect = 6.6e-27, Sum P(2) = 6.6e-27
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD ++ +W PD + +KK HE+++ N + L+ + T+LY T +
Sbjct: 107 LDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTV 158
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 228 (85.3 bits), Expect = 7.4e-27, Sum P(3) = 7.4e-27
Identities = 45/117 (38%), Positives = 75/117 (64%)
Query: 60 QIFVKIKYSICMNAVL-LGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKP 118
Q V+ Y+ AV G + + + F LRR + + + TY+PS L+VV+SW+SFWI
Sbjct: 226 QYSVESYYTSVTKAVYETGLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQ 285
Query: 119 EAIPARVTLGVTSLLTLATQNTQSQQSLPPVS-YVKAIDIWMSSCSVFVFLSLMEFA 174
++PAR +GVT++LT+ T ++ SLP + ++KAID+++ C F+F +L+E+A
Sbjct: 286 SSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYA 342
Score = 80 (33.2 bits), Expect = 7.4e-27, Sum P(3) = 7.4e-27
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFI 59
LD + +W PD F ++K+ H++++ N + ++ + T+LY TA I
Sbjct: 124 LDGRLVSLLWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATI 175
Score = 37 (18.1 bits), Expect = 7.4e-27, Sum P(3) = 7.4e-27
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 235 IDKXXXXXXXXXXXVLNILYWTSFL 259
ID+ ++NI YW +L
Sbjct: 438 IDRHARILFPMAFLLINIFYWLYYL 462
>WB|WBGene00013517 [details] [associations]
symbol:lgc-52 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:AL132862
RefSeq:NP_502839.2 UniGene:Cel.28442 ProteinModelPortal:Q9NA62
SMR:Q9NA62 EnsemblMetazoa:Y73F8A.2 GeneID:190669
KEGG:cel:CELE_Y73F8A.2 UCSC:Y73F8A.2 CTD:190669 WormBase:Y73F8A.2
eggNOG:NOG86111 InParanoid:Q9NA62 OMA:PNILLMI NextBio:946574
Uniprot:Q9NA62
Length = 434
Score = 268 (99.4 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 65/198 (32%), Positives = 104/198 (52%)
Query: 65 IKYSICMNAVLLGNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPAR 124
I Y A G + ++V + R G+++ Y+P+ + V +SWI+FW+ +A+PAR
Sbjct: 236 ITYGSVTEAYTAGMWHRLSVSIHFERLYGFYILQMYLPTYISVFISWIAFWMDTKALPAR 295
Query: 125 VTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVV--NNYMGP 182
+TL V+SL+ L Q +SLP SYVKAIDIWM SC F+F SL+E A+V N+ M
Sbjct: 296 ITLSVSSLMALTFQFGNIVKSLPKASYVKAIDIWMFSCVGFIFFSLIELAIVAYNDKMHD 355
Query: 183 IATKAMKGYSEEDLRNN-VDEFKNLDPTRSRSITIPQVPMYPTFCNGREIALYIDKXXXX 241
+ ++ S +L +N + ++ + T RS V + G E+ ID+
Sbjct: 356 QRLREVR-CSVGNLNSNGIGQYNS---TTRRSF----VELSARRAKGSELGASIDRVASM 407
Query: 242 XXXXXXXVLNILYWTSFL 259
+ N++YW +L
Sbjct: 408 LFPTMFALFNLVYWAYYL 425
Score = 54 (24.1 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 8 LDVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 49
LD + +W P+ N+K H+ PN L ++ + T+
Sbjct: 128 LDHDMEPKLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTI 169
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 249 (92.7 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 45/101 (44%), Positives = 74/101 (73%)
Query: 77 GNFTCIAVVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLA 136
G + + + F LRR + + + TY P+ L+V++SW+SFWI A+PARV+LG+T++LT++
Sbjct: 252 GWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 311
Query: 137 TQNTQSQQSLPPVSYVKAIDIWMSSCSVFVFLSLMEFAVVN 177
T + S+P VSY+KA+D+++ S+FVFLS++E+A VN
Sbjct: 312 TILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVN 352
Score = 76 (31.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 9 DVNWLQNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSNCTAFIQIFV 63
D ++ IW PD FF ++K+ H+ ++ N L ++ D ++L+ T F+
Sbjct: 132 DHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSAMCFM 186
WARNING: HSPs involving 61 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.138 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 248 0.00079 114 3 11 22 0.49 32
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 311
No. of states in DFA: 615 (65 KB)
Total size of DFA: 219 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.82u 0.08s 22.90t Elapsed: 00:00:07
Total cpu time: 22.86u 0.08s 22.94t Elapsed: 00:00:08
Start: Thu Aug 15 12:29:27 2013 End: Thu Aug 15 12:29:35 2013
WARNINGS ISSUED: 2