Query psy15137
Match_columns 774
No_of_seqs 549 out of 1886
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 21:33:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vqm_A HD4, histone deacetylas 100.0 3.1E-63 1.1E-67 550.9 25.5 255 482-747 152-413 (413)
2 2pqp_A HD7A, histone deacetyla 100.0 6.8E-63 2.3E-67 544.0 23.3 237 482-729 181-420 (421)
3 1zz1_A Histone deacetylase-lik 100.0 2.6E-52 8.9E-57 457.2 21.6 221 482-722 136-365 (369)
4 3ew8_A HD8, histone deacetylas 100.0 4.2E-50 1.4E-54 439.8 24.7 278 381-692 16-328 (388)
5 1c3p_A Protein (HDLP (histone 100.0 9.8E-50 3.3E-54 437.7 26.4 211 482-726 123-339 (375)
6 3q9b_A Acetylpolyamine amidohy 100.0 9.4E-50 3.2E-54 431.3 19.5 187 481-688 151-341 (341)
7 3men_A Acetylpolyamine aminohy 100.0 2.6E-49 8.9E-54 430.1 21.2 186 482-689 171-360 (362)
8 4a69_A Histone deacetylase 3,; 100.0 5.1E-49 1.8E-53 431.1 21.5 192 480-692 125-320 (376)
9 3max_A HD2, histone deacetylas 100.0 3E-48 1E-52 423.1 21.7 191 480-692 125-319 (367)
10 4iej_A DNA methyltransferase 1 100.0 9.9E-41 3.4E-45 295.2 5.4 88 115-203 2-89 (93)
11 3hm5_A DNA methyltransferase 1 100.0 2.1E-37 7.1E-42 275.4 5.3 88 115-203 2-89 (93)
12 4iej_A DNA methyltransferase 1 100.0 6E-30 2.1E-34 226.4 4.5 87 368-455 3-89 (93)
13 3hm5_A DNA methyltransferase 1 99.9 2.6E-27 8.9E-32 210.6 4.4 85 369-454 4-88 (93)
14 1x58_A Hypothetical protein 49 97.0 0.00023 7.8E-09 58.8 1.8 49 144-195 9-57 (62)
15 3osg_A MYB21; transcription-DN 96.3 0.0022 7.5E-08 59.8 3.6 50 144-199 63-112 (126)
16 1x58_A Hypothetical protein 49 96.1 0.0014 4.7E-08 54.1 1.1 48 396-446 9-56 (62)
17 2cu7_A KIAA1915 protein; nucle 95.9 0.003 1E-07 53.3 2.1 54 141-200 7-60 (72)
18 2k9n_A MYB24; R2R3 domain, DNA 95.7 0.0054 1.9E-07 55.5 3.4 52 143-200 53-104 (107)
19 1guu_A C-MYB, MYB proto-oncoge 95.4 0.0065 2.2E-07 47.8 2.3 47 142-194 2-49 (52)
20 3sjm_A Telomeric repeat-bindin 95.2 0.0074 2.5E-07 50.0 2.0 48 144-195 12-60 (64)
21 1gv2_A C-MYB, MYB proto-oncoge 95.0 0.0078 2.7E-07 54.1 1.9 49 142-196 55-103 (105)
22 2din_A Cell division cycle 5-l 94.9 0.016 5.3E-07 48.0 3.3 55 142-203 8-62 (66)
23 1w0t_A Telomeric repeat bindin 94.9 0.0078 2.7E-07 47.7 1.3 48 144-195 3-51 (53)
24 2ckx_A NGTRF1, telomere bindin 94.9 0.01 3.4E-07 51.8 2.1 52 145-198 2-54 (83)
25 1gvd_A MYB proto-oncogene prot 94.5 0.014 4.8E-07 45.9 2.0 47 141-193 1-48 (52)
26 2ltp_A Nuclear receptor corepr 93.4 0.0071 2.4E-07 53.3 0.0 51 141-197 14-64 (89)
27 3osg_A MYB21; transcription-DN 94.3 0.02 6.7E-07 53.3 2.8 49 395-449 62-110 (126)
28 2llk_A Cyclin-D-binding MYB-li 94.3 0.01 3.4E-07 50.6 0.7 44 143-193 23-66 (73)
29 2d9a_A B-MYB, MYB-related prot 94.2 0.016 5.5E-07 46.9 1.7 47 141-193 6-53 (60)
30 1x41_A Transcriptional adaptor 94.2 0.017 5.7E-07 47.0 1.8 47 141-193 6-53 (60)
31 2aje_A Telomere repeat-binding 94.0 0.023 8E-07 51.7 2.6 51 143-195 13-64 (105)
32 2yum_A ZZZ3 protein, zinc fing 93.8 0.015 5.1E-07 49.2 0.8 54 142-201 7-66 (75)
33 1guu_A C-MYB, MYB proto-oncoge 93.7 0.027 9.1E-07 44.2 2.0 46 394-445 2-48 (52)
34 1h8a_C AMV V-MYB, MYB transfor 93.6 0.015 5.2E-07 54.1 0.7 47 143-195 79-125 (128)
35 1ity_A TRF1; helix-turn-helix, 93.6 0.025 8.7E-07 47.1 1.8 48 144-195 11-59 (69)
36 3zqc_A MYB3; transcription-DNA 93.6 0.028 9.6E-07 52.6 2.3 49 144-198 55-103 (131)
37 2k9n_A MYB24; R2R3 domain, DNA 93.5 0.033 1.1E-06 50.2 2.6 51 395-451 53-103 (107)
38 2cqr_A RSGI RUH-043, DNAJ homo 93.5 0.031 1.1E-06 47.6 2.2 47 143-195 18-68 (73)
39 2juh_A Telomere binding protei 93.4 0.023 7.7E-07 53.0 1.4 52 144-197 18-70 (121)
40 2cu7_A KIAA1915 protein; nucle 93.3 0.036 1.2E-06 46.7 2.3 51 393-449 7-57 (72)
41 3sjm_A Telomeric repeat-bindin 93.2 0.03 1E-06 46.3 1.7 48 395-446 11-59 (64)
42 1gv2_A C-MYB, MYB proto-oncoge 92.9 0.039 1.3E-06 49.4 2.2 46 395-446 56-101 (105)
43 2elk_A SPCC24B10.08C protein; 92.5 0.048 1.6E-06 44.1 1.9 47 142-193 8-55 (58)
44 2roh_A RTBP1, telomere binding 92.5 0.038 1.3E-06 51.5 1.5 51 144-196 32-83 (122)
45 2llk_A Cyclin-D-binding MYB-li 92.5 0.033 1.1E-06 47.4 1.0 47 393-446 21-67 (73)
46 1gvd_A MYB proto-oncogene prot 92.5 0.055 1.9E-06 42.4 2.2 47 393-445 1-48 (52)
47 2d9a_A B-MYB, MYB-related prot 92.2 0.053 1.8E-06 43.8 1.9 48 393-446 6-54 (60)
48 2ckx_A NGTRF1, telomere bindin 92.2 0.051 1.7E-06 47.4 1.8 50 397-448 2-52 (83)
49 2ltp_A Nuclear receptor corepr 91.2 0.029 1E-06 49.3 0.0 51 393-449 14-64 (89)
50 2cjj_A Radialis; plant develop 91.8 0.077 2.6E-06 47.2 2.6 52 144-201 9-64 (93)
51 1w0t_A Telomeric repeat bindin 91.6 0.076 2.6E-06 41.9 2.1 47 396-446 3-50 (53)
52 1x41_A Transcriptional adaptor 91.4 0.065 2.2E-06 43.5 1.5 47 393-445 6-53 (60)
53 2din_A Cell division cycle 5-l 91.4 0.083 2.9E-06 43.5 2.2 50 393-449 7-56 (66)
54 2dim_A Cell division cycle 5-l 91.3 0.071 2.4E-06 44.5 1.7 48 141-194 7-55 (70)
55 2yus_A SWI/SNF-related matrix- 91.2 0.062 2.1E-06 46.3 1.3 44 143-192 18-61 (79)
56 1h89_C C-MYB, MYB proto-oncoge 91.2 0.048 1.7E-06 52.5 0.6 53 137-195 100-156 (159)
57 2aje_A Telomere repeat-binding 91.0 0.095 3.3E-06 47.6 2.4 54 392-447 10-64 (105)
58 2cqr_A RSGI RUH-043, DNAJ homo 90.9 0.089 3E-06 44.7 1.9 47 394-446 17-67 (73)
59 2elk_A SPCC24B10.08C protein; 90.8 0.078 2.7E-06 42.8 1.5 46 395-445 9-55 (58)
60 3zqc_A MYB3; transcription-DNA 90.6 0.12 4.1E-06 48.3 2.7 53 388-446 43-99 (131)
61 1h8a_C AMV V-MYB, MYB transfor 90.3 0.13 4.4E-06 47.8 2.7 47 394-446 78-124 (128)
62 2juh_A Telomere binding protei 90.3 0.072 2.5E-06 49.6 0.9 55 392-448 14-69 (121)
63 1ity_A TRF1; helix-turn-helix, 89.8 0.12 3.9E-06 43.1 1.7 49 394-446 9-58 (69)
64 2cjj_A Radialis; plant develop 89.3 0.17 6E-06 44.9 2.5 52 395-452 8-63 (93)
65 2dim_A Cell division cycle 5-l 88.5 0.17 5.9E-06 42.1 1.8 48 393-446 7-55 (70)
66 2eqr_A N-COR1, N-COR, nuclear 88.4 0.17 5.8E-06 41.3 1.7 43 144-192 13-55 (61)
67 1wgx_A KIAA1903 protein; MYB D 88.2 0.16 5.3E-06 43.3 1.4 45 143-193 8-56 (73)
68 1ug2_A 2610100B20RIK gene prod 88.0 0.25 8.4E-06 43.6 2.5 52 396-453 34-88 (95)
69 2roh_A RTBP1, telomere binding 87.9 0.27 9.2E-06 45.8 2.9 59 388-448 24-83 (122)
70 2yum_A ZZZ3 protein, zinc fing 87.8 0.1 3.5E-06 44.0 0.0 48 393-446 6-59 (75)
71 2cqq_A RSGI RUH-037, DNAJ homo 87.5 0.15 5.3E-06 43.1 1.0 45 143-194 8-56 (72)
72 1h89_C C-MYB, MYB proto-oncoge 86.4 0.3 1E-05 46.8 2.5 47 394-446 109-155 (159)
73 2yus_A SWI/SNF-related matrix- 86.2 0.18 6.3E-06 43.4 0.7 46 394-445 17-62 (79)
74 1ug2_A 2610100B20RIK gene prod 83.7 0.44 1.5E-05 42.1 2.0 50 145-200 35-87 (95)
75 1wgx_A KIAA1903 protein; MYB D 82.2 0.45 1.5E-05 40.5 1.4 45 395-445 8-56 (73)
76 2eqr_A N-COR1, N-COR, nuclear 81.2 0.54 1.9E-05 38.2 1.5 44 395-444 12-55 (61)
77 2cqq_A RSGI RUH-037, DNAJ homo 81.0 0.44 1.5E-05 40.3 0.9 44 395-445 8-55 (72)
78 4eef_G F-HB80.4, designed hema 79.1 0.56 1.9E-05 39.9 1.0 41 144-190 21-65 (74)
79 2lr8_A CAsp8-associated protei 77.6 0.56 1.9E-05 39.3 0.0 44 396-446 15-61 (70)
80 2iw5_B Protein corest, REST co 75.3 3.6 0.00012 42.1 5.7 86 338-448 95-180 (235)
81 4eef_G F-HB80.4, designed hema 68.8 1.6 5.3E-05 37.2 1.1 44 395-442 20-65 (74)
82 2lr8_A CAsp8-associated protei 66.0 1.6 5.6E-05 36.5 0.0 44 145-195 16-62 (70)
83 2iw5_B Protein corest, REST co 56.1 3.6 0.00012 42.1 1.3 45 143-193 133-177 (235)
84 2yqk_A Arginine-glutamic acid 49.3 7.6 0.00026 31.7 2.0 45 142-191 8-52 (63)
85 2gm2_A Conserved hypothetical 38.3 13 0.00044 34.8 2.0 27 309-335 85-113 (132)
86 3dff_A Teicoplanin pseudoaglyc 37.7 44 0.0015 34.6 6.1 34 600-633 131-164 (273)
87 2fvt_A Conserved hypothetical 37.6 13 0.00044 35.0 1.8 27 309-335 88-116 (135)
88 2fi9_A Outer membrane protein; 35.3 14 0.00049 34.2 1.7 27 309-335 89-117 (128)
89 2ab1_A Hypothetical protein; H 34.5 15 0.00051 33.8 1.7 26 309-334 83-110 (122)
90 3dfi_A Pseudoaglycone deacetyl 34.1 61 0.0021 33.3 6.5 35 599-633 127-161 (270)
91 2ebi_A DNA binding protein GT- 33.2 24 0.00082 30.0 2.7 59 143-203 4-72 (86)
92 3hdg_A Uncharacterized protein 31.7 2.4E+02 0.0082 24.0 9.4 22 526-547 8-29 (137)
93 3bfv_A CAPA1, CAPB2, membrane 30.8 4.3E+02 0.015 26.6 13.8 16 525-540 111-126 (271)
94 3la6_A Tyrosine-protein kinase 30.6 1.5E+02 0.0052 30.5 8.9 15 525-539 121-135 (286)
95 2crg_A Metastasis associated p 30.4 22 0.00076 29.5 2.0 48 144-197 9-56 (70)
96 2yqk_A Arginine-glutamic acid 29.9 23 0.0008 28.7 2.0 46 393-443 7-52 (63)
97 4hf7_A Putative acylhydrolase; 28.7 65 0.0022 30.9 5.3 27 598-628 63-89 (209)
98 1ign_A Protein (RAP1); RAP1,ye 27.7 24 0.00081 36.4 2.0 47 143-195 8-60 (246)
99 4b4c_A Chromodomain-helicase-D 27.7 31 0.0011 34.0 2.8 45 144-193 8-55 (211)
100 1ign_A Protein (RAP1); RAP1,ye 26.6 23 0.00079 36.5 1.7 44 395-444 8-57 (246)
101 4h08_A Putative hydrolase; GDS 26.5 2.4E+02 0.0083 26.2 9.0 29 596-628 57-85 (200)
102 2xag_B REST corepressor 1; ami 25.4 76 0.0026 35.8 5.7 90 330-444 334-423 (482)
103 3trt_A Vimentin; cytoskeleton, 21.0 1.6E+02 0.0053 24.4 5.6 33 324-356 44-76 (77)
104 1ofc_X ISWI protein; nuclear p 20.9 1.5E+02 0.0053 31.4 6.7 60 129-195 91-156 (304)
105 4a69_C Nuclear receptor corepr 20.2 43 0.0015 29.4 1.9 44 143-192 43-86 (94)
No 1
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=3.1e-63 Score=550.89 Aligned_cols=255 Identities=53% Similarity=0.954 Sum_probs=233.0
Q ss_pred hccCcccccC-Ccccchh--hhhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEccc
Q psy15137 482 FERTPEQCGT-GAGLGFN--INIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHR 558 (774)
Q Consensus 482 ~~Rtp~~~~~-~~glgf~--~nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH~ 558 (774)
+.|||+||+. ..++||| ||+|+ ||.|++.. ++++||||||||||||||||+|||+||+|||+|+|+
T Consensus 152 ~vrppGHHA~~~~a~GFC~~Nnvai---------aa~~~~~~--~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~ 220 (413)
T 2vqm_A 152 VVRPPGHHAEESTPMGFCYFNSVAV---------AAKLLQQR--LSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHR 220 (413)
T ss_dssp CCCSCCTTCBTTBCBTTBSSCHHHH---------HHHHHHHH--SCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEE
T ss_pred ecccccccCcCCCCCCccccchHHH---------HHHHHHHh--cCCCeEEEEecccCCCccHHHHHhcCcccccccchh
Confidence 5799999984 4445555 46666 78888875 468999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCCCC
Q psy15137 559 HDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLG 638 (774)
Q Consensus 559 ~~~g~fyPgtG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~plg 638 (774)
+++++||||||..+|+|.|.|.|+|+||||+.|++++++|++|+.+|+.+|+|++++|+||+||||||||+|.+|||+||
T Consensus 221 ~~~~~f~pgtG~~~e~G~g~g~g~~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg 300 (413)
T 2vqm_A 221 YDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLG 300 (413)
T ss_dssp CGGGCSTTCCCCTTCCCSGGGTTCEEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTC
T ss_pred ccCCCCCCCCCCHHHcCCCcccccccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCC
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred ccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCCCCCchhhccCCcHHHHHHHHHHHHHH
Q psy15137 639 GYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTIAIQ 718 (774)
Q Consensus 639 ~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~~l~~~~~~~~~~~~a~~~l~~v~~~~ 718 (774)
+|+||+++|++++++|+++|+||++++|||||++.++++|+.+++++|+|.+.++++...+...|+.+++++|++++++|
T Consensus 301 ~~~lt~~~~~~~~~~l~~~a~~~~v~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~p~~~~~~~p~~~~~~~~~~v~~~~ 380 (413)
T 2vqm_A 301 GYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIH 380 (413)
T ss_dssp CCCBCHHHHHHHHHHHHTSGGGCEEEEECCCCCHHHHHHHHHHHHHHHTTCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHhcCCCEEEEeCcCCChHHHHHHHHHHHHHHcCCCCCCCChhhhhcCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888887777889999999999999999
Q ss_pred hccCCCCcccccccCccccc----hhhhhHHHH
Q psy15137 719 VSHWPVLKRSAHTITWSALS----AAEDNETVS 747 (774)
Q Consensus 719 ~~~W~~l~~~~~~~~~s~~~----~~~~~~~~~ 747 (774)
++||+||++....+..+..| +.+|.||||
T Consensus 381 ~~~W~~l~~~~~~~~~~~~~~~~~~~~e~e~v~ 413 (413)
T 2vqm_A 381 SKYWRCLQRTTSTAGRSLIEAQTCENEEAETVT 413 (413)
T ss_dssp HTTCGGGTSCCCCTTSCHHHHHHTTCC------
T ss_pred HHHhhhhhcchhhcCcCcchhhhhcchhccccC
Confidence 99999999999999988876 678999986
No 2
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=6.8e-63 Score=544.05 Aligned_cols=237 Identities=56% Similarity=1.017 Sum_probs=218.8
Q ss_pred hccCcccccC-Ccccchhh--hhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEccc
Q psy15137 482 FERTPEQCGT-GAGLGFNI--NIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHR 558 (774)
Q Consensus 482 ~~Rtp~~~~~-~~glgf~~--nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH~ 558 (774)
++||||||++ ..++|||+ |+|+ ||.||++. ++++||+|||||||||||||+|||+||+|||||||+
T Consensus 181 ~~rPpGHHA~~~~a~GFC~fNnvAi---------Aa~~l~~~--~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S~H~ 249 (421)
T 2pqp_A 181 VVRPPGHHADHSTAMGFCFFNSVAI---------ACRQLQQQ--SKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHR 249 (421)
T ss_dssp CCSSCCTTCBTTBCBTTBSSCHHHH---------HHHHHHHH--STTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEE
T ss_pred eCCCCCCCCCCCCCCcchhhCHHHH---------HHHHHHHh--cCCCeEEEEecCCCCChhHHHHhcCCCCEEEEeccc
Confidence 5799999984 44455554 6666 88999875 468999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCCCC
Q psy15137 559 HDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLG 638 (774)
Q Consensus 559 ~~~g~fyPgtG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~plg 638 (774)
+++|+||||||..+++|.|.|.|||||||||.|++++++|++|+.+|+.+|+|++++|+||+||||||||+|.+|+||||
T Consensus 250 ~~~g~~yPgtG~~~e~G~g~g~g~~vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~dpLg 329 (421)
T 2pqp_A 250 HDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLG 329 (421)
T ss_dssp CGGGTSTTCCCCTTCCCCGGGTTCEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGC
T ss_pred CCCCCCCCCCCChhhccCCCCccceeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcccccccccccC
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred ccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCCCCCchhhccCCcHHHHHHHHHHHHHH
Q psy15137 639 GYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTIAIQ 718 (774)
Q Consensus 639 ~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~~l~~~~~~~~~~~~a~~~l~~v~~~~ 718 (774)
+|+||+++|++++++|+.+|+||+|++|||||++.+|++++.+|+++|+|.++++++.......|+.+++++|++|+.+|
T Consensus 330 ~~~lt~~~y~~~~~~l~~~a~grvv~vlEGGY~l~~l~~~~~a~~~~L~g~~~~~l~~~~~~~~p~~~a~~~i~~v~~~~ 409 (421)
T 2pqp_A 330 GYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVH 409 (421)
T ss_dssp CCBBCHHHHHHHHHHHTTSGGGCEEEEECSCCCHHHHHHHHHHHHHHHTTCCCCGGGCGGGGSCCCHHHHHHHHHHHHHH
T ss_pred CceeCHHHHHHHHHHHHHHcCCCEEEEECCCCChHHHHHHHHHHHHHHcCCCCCCCcccccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988777665556779999999999999999
Q ss_pred hccCCCCcccc
Q psy15137 719 VSHWPVLKRSA 729 (774)
Q Consensus 719 ~~~W~~l~~~~ 729 (774)
++||+||++.+
T Consensus 410 ~~yW~~l~~~~ 420 (421)
T 2pqp_A 410 SKYWGCMQRLA 420 (421)
T ss_dssp TTTCGGGCC--
T ss_pred HHHhHHHHhhc
Confidence 99999999865
No 3
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=2.6e-52 Score=457.20 Aligned_cols=221 Identities=32% Similarity=0.530 Sum_probs=191.3
Q ss_pred hccCcccccC-Ccccchhh--hhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEccc
Q psy15137 482 FERTPEQCGT-GAGLGFNI--NIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHR 558 (774)
Q Consensus 482 ~~Rtp~~~~~-~~glgf~~--nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH~ 558 (774)
++||||||+. ..++|||+ |+|+ ||.||+++ ++++||+|||||||||||||+|||+||+|||+|+|+
T Consensus 136 ~~rppGHHA~~~~a~GFC~fNnvAi---------Aa~~l~~~--~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~ 204 (369)
T 1zz1_A 136 LVNPPGHHAPHNAAMGFCIFNNTSV---------AAGYARAV--LGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQ 204 (369)
T ss_dssp CCSSCCTTCCTTCCBTTBSSCHHHH---------HHHHHHHT--SCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEE
T ss_pred EecCCccCcCCCCCCCchHhhHHHH---------HHHHHHHh--cCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccC
Confidence 6899999985 44556654 6666 89999875 468999999999999999999999999999999999
Q ss_pred cCCCCCCC-CCCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCCC
Q psy15137 559 HDDGNFFP-GTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPL 637 (774)
Q Consensus 559 ~~~g~fyP-gtG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~pl 637 (774)
++ ||| +||..+++|.|.|.|+++|||||.| ++|++|+.+|+.+|+|++++|+||+||||||||+|.+| ||
T Consensus 205 ~~---~yP~~tG~~~e~G~g~g~g~~vNvPL~~g----~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~D--pL 275 (369)
T 1zz1_A 205 HL---CFPPDSGYSTERGAGNGHGYNINVPLPPG----SGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLD--PL 275 (369)
T ss_dssp TT---SSSTTCCCTTCCCCGGGTTCEEEEEECTT----CBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTC--TT
T ss_pred CC---CCCCCCCcccccCCCCCCceEEeeecCCC----CCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCC--CC
Confidence 74 899 9999999999999999999998765 99999999999999999999999999999999999999 89
Q ss_pred CccccCHHHHHHHHHHHhhhc----CCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCCCCCchh-hccCCcHHHHHHHH
Q psy15137 638 GGYKLSPACFGYMTQQLMTLA----DGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEE-LTRSPCLKAVETLQ 712 (774)
Q Consensus 638 g~~~lt~~~y~~l~~~l~~la----~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~~l~~~~-~~~~~~~~a~~~l~ 712 (774)
|+|+||+++|.++++.|+++| +||++++|||||++.+++.++.+++++|+|.++.+.+... ..+.|..+..+.++
T Consensus 276 g~l~lt~~g~~~~~~~l~~~a~~~~~g~vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~p~~~~~~~~~~~~~~~~~~ 355 (369)
T 1zz1_A 276 ARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLPDPYHEFLAGMGGNTLLDAER 355 (369)
T ss_dssp CCCBBCHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCTTTHHHHHHHHHHHHHCCCCCCCTTHHHHHTTCCCSCCHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCCCCEEEEECCCCCccHHHHHHHHHHHHHhCCCCCCCchhHHHhhccccchHHHHH
Confidence 999999999999999999874 8999999999999999999999999999998752211111 11334445566677
Q ss_pred HHHHHHhccC
Q psy15137 713 KTIAIQVSHW 722 (774)
Q Consensus 713 ~v~~~~~~~W 722 (774)
+++...+++|
T Consensus 356 ~~i~~~~~~~ 365 (369)
T 1zz1_A 356 AAIEEIVPLL 365 (369)
T ss_dssp HHHHTTGGGG
T ss_pred HHHHHHHHHh
Confidence 7777777777
No 4
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=4.2e-50 Score=439.78 Aligned_cols=278 Identities=20% Similarity=0.359 Sum_probs=214.3
Q ss_pred cccCCchHHhhhcCCCCCchhhhhHHHHHHhHcCcce-eEEEcccCCCCCCCCCCHHHHHhhhhhhhHHHHhhcc-----
Q psy15137 381 LSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRF-IVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRG----- 454 (774)
Q Consensus 381 v~~ytd~eY~~~L~~~~WtreETd~Lf~Lc~~fDlR~-ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L~~~r~----- 454 (774)
+.=+.+++|..|-...--.-+-...+.++++.++|-- +.+ + .|.+.|.|+|. |+|+-.. |..++.
T Consensus 16 ~~~~y~~~~~~~~~~HPe~P~Rl~~i~~ll~~~gl~~~~~~---~----~p~~At~e~L~-~vHs~~Y-i~~l~~~~~~~ 86 (388)
T 3ew8_A 16 PVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRI---V----KPKVASMEEMA-TFHTDAY-LQHLQKVSQEG 86 (388)
T ss_dssp CEEECCHHHHHHHTTCTTSTTHHHHHHHHHHHTTGGGGSEE---E----CCCCCCHHHHT-TTSCHHH-HHHHHHHHHHC
T ss_pred EEEEEChHHhccCCCCCCCcHHHHHHHHHHHHcCCcccCeE---e----CCCCCCHHHHH-hhCCHHH-HHHHHHhcccc
Confidence 3345667777765433334455678889999998631 111 1 14568999998 7876542 222211
Q ss_pred c-------ccCCC------------------CCcccccHHHHHHHHHHHHHHhccCcc-cccC-Ccccchhh--hhhhcc
Q psy15137 455 T-------ECSGG------------------NEPKLFDAEHEKKRKEQLKRLFERTPE-QCGT-GAGLGFNI--NIAWSG 505 (774)
Q Consensus 455 ~-------~~s~g------------------~~~~~fd~~~E~eRK~~l~~l~~Rtp~-~~~~-~~glgf~~--nia~~g 505 (774)
. ....+ +...+.+...+.+ ....++|++| ||+. ..++|||+ |||+
T Consensus 87 ~~~~~~~~~~~lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~----~~~Ai~~pGG~HHA~~~~a~GFC~~Ndiai-- 160 (388)
T 3ew8_A 87 DDDHPDSIEYGLGYLCPATEGIFDYAAAIGGATITAAQCLIDGM----CKVAINWSGGWHHAKKDEASGFCYLNDAVL-- 160 (388)
T ss_dssp --------CCSCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTS----CSEEEETTCCCTTCBTTBCBTTBSSCHHHH--
T ss_pred cccchhhhhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCC----CceeeecCCcccceeecCCCCchhhhHHHH--
Confidence 0 00001 1111122222111 1234778888 8874 44555554 6666
Q ss_pred cCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEccccCCCCCCCCCCCCCccCCCCCCcceee
Q psy15137 506 ALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNIN 585 (774)
Q Consensus 506 g~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH~~~~g~fyPgtG~~~e~G~g~g~G~~vN 585 (774)
||.+|+. +.+||||||||||||||||+|||+||+|||+|+|+++.+ ||||||..+++|.|.|.||+||
T Consensus 161 -------Aa~~l~~----~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~-~fPgtG~~~e~G~g~g~g~~vN 228 (388)
T 3ew8_A 161 -------GILRLRR----KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVN 228 (388)
T ss_dssp -------HHHHHTT----TCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTT-CTTCCCCTTCCCCGGGTTSEEE
T ss_pred -------HHHHHHh----cCCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCC-CCCCCCCcccccCCCCcceeee
Confidence 7888874 368999999999999999999999999999999998654 9999999999999999999999
Q ss_pred eccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCCCCccccCHHHHHHHHHHHhhhcCCcEEEE
Q psy15137 586 IAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLA 665 (774)
Q Consensus 586 vpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~plg~~~lt~~~y~~l~~~l~~la~grvv~v 665 (774)
||||.| ++|++|+.+|+.+|.|++++|+||+||||||||+|.+| |||+|+||+++|.++++.|+++ +.|++++
T Consensus 229 vPL~~G----~~d~~y~~~~~~~l~p~~~~F~PdlIvvsaG~Da~~~D--pLg~l~lt~~g~~~~~~~l~~~-~~p~l~~ 301 (388)
T 3ew8_A 229 VPIQDG----IQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGD--PMCSFNMTPVGIGKCLKYILQW-QLATLIL 301 (388)
T ss_dssp EEECTT----CCHHHHHHHHHHHHHHHHHHHCCSEEEEECCSTTBTTC--TTCCCCBCHHHHHHHHHHHHTT-CCEEEEE
T ss_pred ccCCCC----CCHHHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCC--CCCCCcCCHHHHHHHHHHHHhc-CCCEEEE
Confidence 998765 89999999999999999999999999999999999999 8999999999999999999987 5799999
Q ss_pred eCCCCCchhHHHHHHHHHHHHcCCCCC
Q psy15137 666 LEGGYDLPSMCDSAEACVRALLGDAPP 692 (774)
Q Consensus 666 LEGGY~~~~l~~~~~a~v~~Llg~~~~ 692 (774)
+||||++.++++||..++..|+|.+.+
T Consensus 302 ~gGGY~~~~var~w~~~~~~l~g~~l~ 328 (388)
T 3ew8_A 302 GGGGYNLANTARCWTYLTGVILGKTLS 328 (388)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHTCCCC
T ss_pred ECCCCChhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999998754
No 5
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=9.8e-50 Score=437.67 Aligned_cols=211 Identities=25% Similarity=0.319 Sum_probs=183.2
Q ss_pred hccCcc--cccC-Ccccchhh--hhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEc
Q psy15137 482 FERTPE--QCGT-GAGLGFNI--NIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSI 556 (774)
Q Consensus 482 ~~Rtp~--~~~~-~~glgf~~--nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSi 556 (774)
..|+|| ||+. ..++|||+ |+|+ ||.+|+++ +.+||||||||||||||||+|||+||+|||+||
T Consensus 123 a~~ppGG~HHA~~~~a~GFC~fNnvAi---------Aa~~l~~~---g~~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~Si 190 (375)
T 1c3p_A 123 AFNPAGGMHHAFKSRANGFCYINNPAV---------GIEYLRKK---GFKRILYIDLDAHHCDGVQEAFYDTDQVFVLSL 190 (375)
T ss_dssp EEETTCCCTTCBTTBCBTTBSSCHHHH---------HHHHHHHT---TCCCEEEEECSSSCCHHHHHHHTTCSSEEEEEE
T ss_pred eeecCcccceeeeccCCCceeecHHHH---------HHHHHHHh---CCCeEEEEecCCCCCHHHHHHhccCCCEEEEec
Confidence 358999 9884 44555554 6666 88999865 468999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCccC-CCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCC
Q psy15137 557 HRHDDGNFFPGTGGPIECG-TGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPP 635 (774)
Q Consensus 557 H~~~~g~fyPgtG~~~e~G-~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~ 635 (774)
|+++ ..||||||..+++| .|.|.|+++|||||.| ++|++|+.+|+.+|.|++++|+||+||||||||+|.+|
T Consensus 191 H~~~-~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g----~~D~~yl~a~~~~l~p~l~~F~PdlIvvsaG~Da~~~D-- 263 (375)
T 1c3p_A 191 HQSP-EYAFPFEKGFLEEIGEGKGKGYNLNIPLPKG----LNDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLED-- 263 (375)
T ss_dssp EECT-TTSTTSSSCCTTCCCCGGGTTSEEEEEECTT----CCHHHHHHHHHHHHHHHHHHCCCSEEEEECCSTTBTTC--
T ss_pred ccCC-CCCCCCCCCccccCCcCCCCceEEEEeCCCC----CCHHHHHHHHHHHHHHHHHHhCCCEEEEECCccccCCC--
Confidence 9975 45899999999999 9999999999998765 99999999999999999999999999999999999999
Q ss_pred CCCccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCCCCCchhhccCCcHHHHHHHHHHH
Q psy15137 636 PLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTI 715 (774)
Q Consensus 636 plg~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~~l~~~~~~~~~~~~a~~~l~~v~ 715 (774)
|||+|+||+++|.++++.|++++. +++++|||||++.++++|+.+++++|+|.+.++.- |. ...+.
T Consensus 264 pLg~l~lt~~g~~~~~~~l~~~a~-~vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~l-------p~-~~~~~----- 329 (375)
T 1c3p_A 264 YLSKFNLSNVAFLKAFNIVREVFG-EGVYLGGGGYHPYALARAWTLIWCELSGREVPEKL-------NN-KAKEL----- 329 (375)
T ss_dssp TTCSCCBCHHHHHHHHHHHHHHHC-SCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSSC-------CH-HHHHH-----
T ss_pred CCCCcccCHHHHHHHHHHHHHhcc-ceEEEECCCCChHHHHHHHHHHHHHHcCCCCCccC-------CH-HHHHH-----
Confidence 899999999999999999999985 59999999999999999999999999998754321 11 12222
Q ss_pred HHHhccCCCCc
Q psy15137 716 AIQVSHWPVLK 726 (774)
Q Consensus 716 ~~~~~~W~~l~ 726 (774)
.+..+|++..
T Consensus 330 -~~~~~~~~~~ 339 (375)
T 1c3p_A 330 -LKSIDFEEFD 339 (375)
T ss_dssp -HHHSCCCCSS
T ss_pred -HHhcCccccc
Confidence 2568999885
No 6
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=9.4e-50 Score=431.33 Aligned_cols=187 Identities=25% Similarity=0.384 Sum_probs=169.3
Q ss_pred HhccCcccccC-Ccccchh--hhhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEcc
Q psy15137 481 LFERTPEQCGT-GAGLGFN--INIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIH 557 (774)
Q Consensus 481 l~~Rtp~~~~~-~~glgf~--~nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH 557 (774)
.++||||||+. ..++||| ||+|+ ||.+|++. |.+||+|||||||||||||+|||+||+|||+|+|
T Consensus 151 al~rppGHHA~~~~a~GFC~~Nnvai---------Aa~~l~~~---g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H 218 (341)
T 3q9b_A 151 SLCRPPGHHAGIDMFGGYCFINNAAV---------AAQRLLDK---GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLH 218 (341)
T ss_dssp ECCSSCCTTCBTTBBBTTBSSCHHHH---------HHHHHHHT---TCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEE
T ss_pred ecCCCCCCCCCCCCCCCccccCHHHH---------HHHHHHHc---CCCeEEEEecCCCCCcchhHHhcCCCCEEEEecc
Confidence 36899999984 4445555 46666 88999874 5899999999999999999999999999999999
Q ss_pred ccCCCCCCCC-CCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCC
Q psy15137 558 RHDDGNFFPG-TGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPP 636 (774)
Q Consensus 558 ~~~~g~fyPg-tG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~p 636 (774)
+++ +.|||+ ||..+|+|.|.|.|+++|||||.| ++|++|+.+|+.+ +|.+++|+||+||||||||+|.+| |
T Consensus 219 ~~~-~~~yP~~tG~~~e~G~g~g~g~~vNvpL~~g----~~d~~y~~~~~~~-l~~l~~f~Pd~ivvsaG~D~~~~D--p 290 (341)
T 3q9b_A 219 GDP-AEAFPHFLGYAEETGKGAGAGTTANYPMGRG----TPYSVWGEALTDS-LKRIAAFGAEAIVVSLGVDTFEQD--P 290 (341)
T ss_dssp ECG-GGSTTCSSCCTTCCCCGGGTTCEEEEEECTT----CBHHHHHHHHHHH-HHHHHHHTCSCEEEEECCTTBTTC--T
T ss_pred CCC-ccCCCCCCCcccccCCCCCCceeEeeecCCC----CChHHHHHHHHHH-HHHHHhhCCCEEEEeCCccccCCC--C
Confidence 964 469999 999999999999999999998765 8999999999986 477899999999999999999999 8
Q ss_pred CCccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcC
Q psy15137 637 LGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLG 688 (774)
Q Consensus 637 lg~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg 688 (774)
||+|+||+++|.++++.|+++ ++|++++|||||++.+|+.|+.+++++|.|
T Consensus 291 lg~~~lt~~~~~~~~~~l~~~-~~~~v~vleGGY~~~~l~~~~~~~l~g~~~ 341 (341)
T 3q9b_A 291 ISFFKLTSPDYITMGRTIAAS-GVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341 (341)
T ss_dssp TCCCBBCTTHHHHHHHHHHTT-SSCEEEEECCCCCCTTHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHHh-CCCEEEEECCCCChHHHHHHHHHHHHHhcC
Confidence 999999999999999999998 479999999999999999999999999865
No 7
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=2.6e-49 Score=430.13 Aligned_cols=186 Identities=29% Similarity=0.485 Sum_probs=168.7
Q ss_pred hccCcccccC-Ccccchh--hhhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEEccc
Q psy15137 482 FERTPEQCGT-GAGLGFN--INIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHR 558 (774)
Q Consensus 482 ~~Rtp~~~~~-~~glgf~--~nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iSiH~ 558 (774)
++|||+||+. ..++||| ||+|+ ||.+|++. .+||+|||||||||||||+|||+||+|||+|||+
T Consensus 171 l~rPpGHHA~~~~a~GFC~fNnvAi---------Aa~~l~~~----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~ 237 (362)
T 3men_A 171 LCRPPGHHARVDAAGGFCYLNNAAI---------AAQALRAR----HARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHG 237 (362)
T ss_dssp CCSSCCTTCBTTBBBTTBSSCHHHH---------HHHHHTTT----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEE
T ss_pred eCCCCCCCCCCCCCCCccccCHHHH---------HHHHHHHc----CCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecC
Confidence 6799999984 4445555 56666 88998864 5899999999999999999999999999999999
Q ss_pred cCCCCCCCC-CCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCCCC
Q psy15137 559 HDDGNFFPG-TGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPL 637 (774)
Q Consensus 559 ~~~g~fyPg-tG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~pl 637 (774)
++ +.|||+ ||..+|+|.|.|.|++||||||.| ++|++|+.+|+.+ +|++++|+||+||||||||+|.+| ||
T Consensus 238 ~~-~~~yP~~tG~~~e~G~g~g~g~~vNvPL~~g----~~d~~yl~~~~~~-l~~l~~f~PdlIvvsaG~Da~~~D--pl 309 (362)
T 3men_A 238 DP-TNFYPAVAGFDDERGAGEGLGYNVNLPMPHG----SSEAAFFERVDDA-LRELRRFAPDALVLSLGFDVYRDD--PQ 309 (362)
T ss_dssp CC-TTSTTCSSCCTTCCCSGGGTTSEEEEEECTT----BCHHHHHHHHHHH-HHHHHHHCCSEEEEEECSTTBTTC--TT
T ss_pred CC-ccCCCCCCCccccccCCCCCceeEeeccCCC----CChHHHHHHHHHH-HHHHHhcCCCEEEEECcccCcCCC--CC
Confidence 64 569999 999999999999999999998765 8999999999986 578899999999999999999999 89
Q ss_pred CccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCC
Q psy15137 638 GGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGD 689 (774)
Q Consensus 638 g~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~ 689 (774)
|+++||+++|.++++.|+++ ++|++++|||||++.+|++|+.+++++|.|.
T Consensus 310 g~l~lt~~~~~~~~~~l~~~-~~~~v~vleGGY~~~~l~~~~~a~l~~l~~~ 360 (362)
T 3men_A 310 SQVAVTTDGFGRLGHLIGAL-RLPTVIVQEGGYHIESLEANARSFFGGFGAL 360 (362)
T ss_dssp CCBCBCHHHHHHHHHHHHTT-CCCEEEEECCCCCHHHHHHHHHHHHHHHTC-
T ss_pred CCccCCHHHHHHHHHHHHhh-CCCEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998 4899999999999999999999999999863
No 8
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.1e-49 Score=431.06 Aligned_cols=192 Identities=22% Similarity=0.372 Sum_probs=172.9
Q ss_pred HHhccCcc-cccC-Ccccchhh--hhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEE
Q psy15137 480 RLFERTPE-QCGT-GAGLGFNI--NIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLS 555 (774)
Q Consensus 480 ~l~~Rtp~-~~~~-~~glgf~~--nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iS 555 (774)
..++++++ ||+. ..++|||+ |+|+ ||.+|++. .+||||||||||||||||+|||+||+|||+|
T Consensus 125 ~A~~~~gG~HHA~~~~a~GFC~~NdvAi---------Aa~~l~~~----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S 191 (376)
T 4a69_A 125 IAINWAGGLHHAKKFEASGFCYVNDIVI---------GILELLKY----HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191 (376)
T ss_dssp EEEETTCCCTTCBTTBCBTTBSSCHHHH---------HHHHHTTT----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEE
T ss_pred eeeeCCCCCCcCCcCCCCcchhhhHHHH---------HHHHHHHh----CCcEEEEeccCCCCcchhhHhcCCCCEEEEe
Confidence 34677775 8874 44555654 6666 78888753 4899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCC
Q psy15137 556 IHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPP 635 (774)
Q Consensus 556 iH~~~~g~fyPgtG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~ 635 (774)
+|+++. .||||||..+|+|.|.|.|++||||||.| ++|++|+.+|+.+|.|++++|+||+||||||||+|.+|
T Consensus 192 ~H~~~~-~~fPgtG~~~e~G~g~g~g~~vNvPL~~G----~~D~~yl~~~~~~l~p~~~~f~Pd~IvvsaG~Da~~~D-- 264 (376)
T 4a69_A 192 FHKYGN-YFFPGTGDMYEVGAESGRYYCLNVPLRDG----IDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCD-- 264 (376)
T ss_dssp EEECST-TCTTCCCCTTCCCCGGGTTSEEEEEECTT----CBHHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTC--
T ss_pred cccCCC-cCCCCCCCccccCCCCCCceeEeeecCCC----CCHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccCCCCC--
Confidence 999864 39999999999999999999999998765 99999999999999999999999999999999999999
Q ss_pred CCCccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCC
Q psy15137 636 PLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPP 692 (774)
Q Consensus 636 plg~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~ 692 (774)
|||+|+||+++|+++++.++++ ++|+++++||||++.++++||..++..|+|.+.+
T Consensus 265 pLg~l~Lt~~g~~~~~~~l~~~-~~p~v~v~eGGY~~~~var~w~~~~a~l~g~~~~ 320 (376)
T 4a69_A 265 RLGCFNLSIRGHGECVEYVKSF-NIPLLVLGGGGYTVRNVARCWTYETSLLVEEAIS 320 (376)
T ss_dssp SSCCCBBCHHHHHHHHHHHHTT-CCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCeecCHHHHHHHHHHHHHc-CCCEEEEECCCCChhHHHHHHHHHHHHhcCCCcc
Confidence 8999999999999999999987 6899999999999999999999999999997644
No 9
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=3e-48 Score=423.15 Aligned_cols=191 Identities=23% Similarity=0.410 Sum_probs=173.2
Q ss_pred HHhccCcc-cccC-Ccccchhh--hhhhcccCCchHHhHHHHHhcCCCCcCeeEEEeccCcCcchHHHHhhcCCceEEEE
Q psy15137 480 RLFERTPE-QCGT-GAGLGFNI--NIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLS 555 (774)
Q Consensus 480 ~l~~Rtp~-~~~~-~~glgf~~--nia~~gg~hha~~aa~yL~~~~~~~~~RVlIVD~DvHHGnGTq~iF~~dp~Vl~iS 555 (774)
..++|++| ||+. ..++|||+ |+|+ ||.++++. .+||||||||||||||||+|||+||+|||+|
T Consensus 125 ~Ai~~pgG~HHA~~~~a~GFC~~Ndvai---------Aa~~l~~~----~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S 191 (367)
T 3max_A 125 MAVNWAGGLHHAKKSEASGFCYVNDIVL---------AILELLKY----HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 191 (367)
T ss_dssp EEEETTCCCTTCBTTBCBTTBCSCHHHH---------HHHHHTTT----CSCEEEEECSSSCCHHHHHHTTTCSSEEEEE
T ss_pred eEecCCCCCCcCCcCCCCCchhhhHHHH---------HHHHHHHc----CCcEEEEecCCCCCchhhHHhcCCCCEEEEe
Confidence 34789998 8874 44555654 6666 78888753 4899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCCcceeeeccCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCCCC
Q psy15137 556 IHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPP 635 (774)
Q Consensus 556 iH~~~~g~fyPgtG~~~e~G~g~g~G~~vNvpl~~gl~~~~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~Dp~ 635 (774)
+|+++ .||||||..+++|.|.|.|++||||||.| ++|++|+.+|+.+|.|++++|+||+||||||||+|.+|
T Consensus 192 ~H~~~--~~fPgtg~~~e~G~g~g~g~~vNvPL~~g----~~d~~y~~~~~~~~~~~~~~f~Pd~ivvsaG~D~~~~D-- 263 (367)
T 3max_A 192 FHKYG--EYFPGTGDLRDIGAGKGKYYAVNFPMRDG----IDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD-- 263 (367)
T ss_dssp EEECS--SCTTCCCCTTCCCCGGGTTCEEEEEECTT----CCHHHHHHHHHHHHHHHHHHHCCSEEEEECCGGGBTTC--
T ss_pred cccCC--CCCCCCCCccccCCCCCCceEEEEecCCC----CCHHHHHHHHHHHHHHHHHHhCCCEEEEECCccCcCCC--
Confidence 99973 69999999999999999999999998765 89999999999999999999999999999999999999
Q ss_pred CCCccccCHHHHHHHHHHHhhhcCCcEEEEeCCCCCchhHHHHHHHHHHHHcCCCCC
Q psy15137 636 PLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPP 692 (774)
Q Consensus 636 plg~~~lt~~~y~~l~~~l~~la~grvv~vLEGGY~~~~l~~~~~a~v~~Llg~~~~ 692 (774)
|||+|+||+++|.++++.++++ ++|+++++||||++.++++||..+...++|.+.+
T Consensus 264 plg~~~lt~~g~~~~~~~~~~~-~~p~v~~~eGGY~~~~var~wt~~ta~~~~~~i~ 319 (367)
T 3max_A 264 RLGCFNLTVKGHAKCVEVVKTF-NLPLLMLGGGGYTIRNVARCWTYETAVALDCEIP 319 (367)
T ss_dssp SSCCCCBCHHHHHHHHHHHHTT-CCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCeeeCHHHHHHHHHHHHhc-CCCEEEEeCCCCChhHHHHHHHHHHHHHhhcccc
Confidence 8999999999999999999886 7899999999999999999999999999998755
No 10
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=100.00 E-value=9.9e-41 Score=295.20 Aligned_cols=88 Identities=60% Similarity=1.157 Sum_probs=72.3
Q ss_pred CCCCCCccccccccccccCHHHHHhhcCCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15137 115 GKEYPFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194 (774)
Q Consensus 115 ~~~y~FakfN~~~~i~~yt~eeY~~~l~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~ 194 (774)
+++|||||||++|+||+||+|||++||++++||+|||||||+||++|||||+||+|||+++++. .|||||||+|||+||
T Consensus 2 ~~~y~FakfN~~v~ip~yt~eEY~~~L~~~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~~-~RtvEdLK~RYY~V~ 80 (93)
T 4iej_A 2 GKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK-KRSVEDLKERYYHIC 80 (93)
T ss_dssp ------------CCCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTSC-CCCHHHHHHHHHHHH
T ss_pred CCCCCccccCCcCCCcccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCCC-CCCHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999987654 499999999999999
Q ss_pred HHHHhhcCC
Q psy15137 195 HTLAKMRGT 203 (774)
Q Consensus 195 ~~l~~~r~~ 203 (774)
++|+++|++
T Consensus 81 ~~l~~~r~~ 89 (93)
T 4iej_A 81 AKLANVRAV 89 (93)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHhhCC
Confidence 999999987
No 11
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=275.41 Aligned_cols=88 Identities=60% Similarity=1.157 Sum_probs=71.0
Q ss_pred CCCCCCccccccccccccCHHHHHhhcCCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15137 115 GKEYPFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194 (774)
Q Consensus 115 ~~~y~FakfN~~~~i~~yt~eeY~~~l~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~ 194 (774)
+++|||||||++++||+||+|||++||++++||+|||||||+||++|||||+||+|||++++++. |||||||+|||+||
T Consensus 2 ~~~y~fakfN~~~~i~~yt~eeY~~~L~~~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~~-Rt~EdLK~RyY~v~ 80 (93)
T 3hm5_A 2 GKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKK-RSVEDLKERYYHIC 80 (93)
T ss_dssp -------------CCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSCC-CCHHHHHHHHHHHH
T ss_pred CCCCCchhccccCCCCccCHHHHHHHcCCCCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCCC-CCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999876544 99999999999999
Q ss_pred HHHHhhcCC
Q psy15137 195 HTLAKMRGT 203 (774)
Q Consensus 195 ~~l~~~r~~ 203 (774)
++|+++|..
T Consensus 81 ~~l~~~r~~ 89 (93)
T 3hm5_A 81 AKLANVRAV 89 (93)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHhcCC
Confidence 999999963
No 12
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=99.96 E-value=6e-30 Score=226.42 Aligned_cols=87 Identities=49% Similarity=0.885 Sum_probs=71.6
Q ss_pred cccCCcccccccccccCCchHHhhhcCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhH
Q psy15137 368 FQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCY 447 (774)
Q Consensus 368 ~~~p~~~~~~t~~v~~ytd~eY~~~L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~ 447 (774)
.++|++.||....|++||++||+++|++++||+|||||||+||++|||||+||+|||++.++ ..|||||||+|||+||+
T Consensus 3 ~~y~FakfN~~v~ip~yt~eEY~~~L~~~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~-~~RtvEdLK~RYY~V~~ 81 (93)
T 4iej_A 3 KDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQF-KKRSVEDLKERYYHICA 81 (93)
T ss_dssp -----------CCCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTS-CCCCHHHHHHHHHHHHH
T ss_pred CCCCccccCCcCCCcccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCC-CCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999998754 36999999999999999
Q ss_pred HHHhhccc
Q psy15137 448 TLAKMRGT 455 (774)
Q Consensus 448 ~L~~~r~~ 455 (774)
+|+++|++
T Consensus 82 ~l~~~r~~ 89 (93)
T 4iej_A 82 KLANVRAV 89 (93)
T ss_dssp HHHHHTC-
T ss_pred HHHHhhCC
Confidence 99999865
No 13
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.6e-27 Score=210.63 Aligned_cols=85 Identities=51% Similarity=0.915 Sum_probs=70.5
Q ss_pred ccCCcccccccccccCCchHHhhhcCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHH
Q psy15137 369 QIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYT 448 (774)
Q Consensus 369 ~~p~~~~~~t~~v~~ytd~eY~~~L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~ 448 (774)
++|++.||....|++||++||+++|+++.||+|||||||+||++|||||+||+|||++.+++ .|||||||+|||+||++
T Consensus 4 ~y~fakfN~~~~i~~yt~eeY~~~L~~~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~-~Rt~EdLK~RyY~v~~~ 82 (93)
T 3hm5_A 4 DYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK-KRSVEDLKERYYHICAK 82 (93)
T ss_dssp -----------CCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSC-CCCHHHHHHHHHHHHHH
T ss_pred CCCchhccccCCCCccCHHHHHHHcCCCCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCC-CCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999987544 59999999999999999
Q ss_pred HHhhcc
Q psy15137 449 LAKMRG 454 (774)
Q Consensus 449 L~~~r~ 454 (774)
|.+.|+
T Consensus 83 l~~~r~ 88 (93)
T 3hm5_A 83 LANVRA 88 (93)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 999885
No 14
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=96.98 E-value=0.00023 Score=58.76 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=44.0
Q ss_pred CCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
..||.||+.+|++..++|+-.|--|..-|.+ ...||-=|||+||+.+.+
T Consensus 9 ~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f---~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 9 KDFTKEEVNYLFHGVKTMGNHWNSILWSFPF---QKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHSCC---CTTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhHhHHHHHHhCCC---ccCcccchHHHHHHHHHh
Confidence 4799999999999999999999999998865 245999999999998876
No 15
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=96.29 E-value=0.0022 Score=59.81 Aligned_cols=50 Identities=20% Similarity=0.381 Sum_probs=44.6
Q ss_pred CCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q psy15137 144 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAK 199 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~ 199 (774)
..||.||...|+++.++|+-+|-.|+..+. +||-.++|.||+.+.+++-.
T Consensus 63 ~~WT~eEd~~L~~~v~~~G~~W~~Ia~~l~------gRt~~~~k~rw~~l~~k~~~ 112 (126)
T 3osg_A 63 TPWTAEEDALLVQKIQEYGRQWAIIAKFFP------GRTDIHIKNRWVTISNKLGI 112 (126)
T ss_dssp SCCCHHHHHHHHHHHHHHCSCHHHHHTTST------TCCHHHHHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHHHHHCcCHHHHHHHcC------CCCHHHHHHHHHHHHHhcCC
Confidence 479999999999999999999999997652 49999999999999997643
No 16
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=96.13 E-value=0.0014 Score=54.12 Aligned_cols=48 Identities=19% Similarity=0.242 Sum_probs=43.2
Q ss_pred CCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 396 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 396 ~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
..||.||+..|++..++|+-.|--|...|.+ ...||-=|||+||+...
T Consensus 9 ~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f---~~~RT~VdLKdk~r~L~ 56 (62)
T 1x58_A 9 KDFTKEEVNYLFHGVKTMGNHWNSILWSFPF---QKGRRAVDLAHKYHRLI 56 (62)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHSCC---CTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhHhHHHHHHhCCC---ccCcccchHHHHHHHHH
Confidence 5899999999999999999999999988875 34799999999998765
No 17
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=95.86 E-value=0.003 Score=53.29 Aligned_cols=54 Identities=22% Similarity=0.172 Sum_probs=47.6
Q ss_pred cCCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKM 200 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~ 200 (774)
+....||.||-..|+++.+.|+-+|-.|+..+. .||-.+.|.||+...++.++.
T Consensus 7 ~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~------~Rt~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 7 GYSVKWTIEEKELFEQGLAKFGRRWTKISKLIG------SRTVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHHS------SSCHHHHHHHHHHHHHHHSCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHhc
Confidence 345689999999999999999999999999762 399999999999999888765
No 18
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=95.74 E-value=0.0054 Score=55.49 Aligned_cols=52 Identities=15% Similarity=0.302 Sum_probs=46.5
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKM 200 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~ 200 (774)
...||.||-..|++++..|+-+|-.|+..+. +||-.++|.||+.+.+++.+.
T Consensus 53 ~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l~------gRt~~~~k~rw~~l~r~~~~~ 104 (107)
T 2k9n_A 53 TDPWSPEEDMLLDQKYAEYGPKWNKISKFLK------NRSDNNIRNRWMMIARHRAKH 104 (107)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSCHHHHHHHHS------SSCHHHHHHHHHHHHHHHHSS
T ss_pred ccccCHHHHHHHHHHHHHhCcCHHHHHHHCC------CCCHHHHHHHHHHHHhhHHHh
Confidence 4589999999999999999999999998662 499999999999999987654
No 19
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=95.39 E-value=0.0065 Score=47.80 Aligned_cols=47 Identities=26% Similarity=0.340 Sum_probs=41.3
Q ss_pred CCCCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15137 142 QSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~ 194 (774)
+...||.||-..|.+++++|+- +|-.|+..+. .||-.+.++||+.+-
T Consensus 2 ~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~------~Rt~~qcr~Rw~~~L 49 (52)
T 1guu_A 2 GKTRWTREEDEKLKKLVEQNGTDDWKVIANYLP------NRTDVQCQHRWQKVL 49 (52)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTST------TCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcC------CCCHHHHHHHHHHHc
Confidence 4568999999999999999998 9999998873 399999999998764
No 20
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=95.17 E-value=0.0074 Score=50.02 Aligned_cols=48 Identities=19% Similarity=0.334 Sum_probs=41.4
Q ss_pred CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
..||.||.+.|.+++++|+- +|-.|+.-+.. ..||--++|+||..+.+
T Consensus 12 ~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~----~~Rt~~qcr~Rw~nl~k 60 (64)
T 3sjm_A 12 QKWTVEESEWVKAGVQKYGEGNWAAISKNYPF----VNRTAVMIKDRWRTMKR 60 (64)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCC----SSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHccCCCchHHHHhhcCC----CCCCHHHHHHHHHHHhc
Confidence 47999999999999999995 89999987642 24999999999987754
No 21
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=95.03 E-value=0.0078 Score=54.05 Aligned_cols=49 Identities=20% Similarity=0.395 Sum_probs=42.3
Q ss_pred CCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15137 142 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHT 196 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~ 196 (774)
+...||.||-..|++++++|+-+|-.|+..+ + +||-.++|.||+...++
T Consensus 55 ~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l-----~-gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 55 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-----P-GRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCCHHHHHHHHHHHHHHSSCHHHHHTTC-----T-TCCHHHHHHHHHHHTC-
T ss_pred cccCCCHHHHHHHHHHHHHhCCCHHHHHHHc-----C-CCCHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999765 2 49999999999987654
No 22
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.91 E-value=0.016 Score=47.96 Aligned_cols=55 Identities=20% Similarity=0.351 Sum_probs=47.5
Q ss_pred CCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCC
Q psy15137 142 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMRGT 203 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~r~~ 203 (774)
+...||.||-..|+++.+.|.-+|-.|+. +. .||-.+.|+||....+..+..-..
T Consensus 8 ~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~------gRt~~qcr~Rw~~~l~~~~~~~~~ 62 (66)
T 2din_A 8 KKTEWSREEEEKLLHLAKLMPTQWRTIAP-II------GRTAAQCLEHYEFLLDKAAQRDSG 62 (66)
T ss_dssp SCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH------SSCHHHHHHHHHHHHHHHHHSSSC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc------CcCHHHHHHHHHHHhChHhcCCCC
Confidence 34579999999999999999999999999 63 399999999999998887765443
No 23
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=94.88 E-value=0.0078 Score=47.68 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=41.9
Q ss_pred CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
..||.||...|.+++++|+. +|-.|+..+.. . .||--++++||..+.+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~---~-~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKF---N-NRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCC---S-SCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCC---C-CCCHHHHHHHHHHHHc
Confidence 46999999999999999995 99999998742 1 4999999999998765
No 24
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=94.86 E-value=0.01 Score=51.84 Aligned_cols=52 Identities=23% Similarity=0.313 Sum_probs=43.5
Q ss_pred CCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy15137 145 TWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLA 198 (774)
Q Consensus 145 ~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~ 198 (774)
.||.||.+.|.+++++|+. +|-.|...|.. -+ ..||--|||+||....++-.
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~-~~-~~RT~~~lKdrWrnllk~~~ 54 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFD-NA-DHRTYVDLKDKWKTLVHTAS 54 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCT-TC-TTSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhcc-cc-CCCCHHHHHHHHHHHHHhcc
Confidence 5999999999999999999 99999987431 12 35999999999999887543
No 25
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=94.52 E-value=0.014 Score=45.92 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=40.8
Q ss_pred cCCCCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
|+...||.||...|.+++++|+- +|-.|+..+. .||-.+.++||...
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~------~Rt~~qcr~Rw~~~ 48 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLK------GRIGKQCRERWHNH 48 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTST------TCCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHcC------CCCHHHHHHHHHHH
Confidence 34568999999999999999997 6999998862 49999999999864
No 26
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=93.43 E-value=0.0071 Score=53.27 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=44.3
Q ss_pred cCCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTL 197 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l 197 (774)
+....||.||-..|+++.+.|+-+|-.|+..+. +||..+.|.|||...+++
T Consensus 14 ~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~------gRt~~q~k~r~~~~lrk~ 64 (89)
T 2ltp_A 14 LYFQGWTEEEMGTAKKGLLEHGRNWSAIARMVG------SKTVSQCKNFYFNYKKRQ 64 (89)
Confidence 344579999999999999999999999998762 499999999999877654
No 27
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=94.30 E-value=0.02 Score=53.33 Aligned_cols=49 Identities=24% Similarity=0.450 Sum_probs=43.2
Q ss_pred CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHH
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTL 449 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L 449 (774)
...||.||...|+++.+.|+-+|-.|+.. +| .||-.++|+||+.+.+++
T Consensus 62 ~~~WT~eEd~~L~~~v~~~G~~W~~Ia~~-----l~-gRt~~~~k~rw~~l~~k~ 110 (126)
T 3osg_A 62 HTPWTAEEDALLVQKIQEYGRQWAIIAKF-----FP-GRTDIHIKNRWVTISNKL 110 (126)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSCHHHHHTT-----ST-TCCHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHCcCHHHHHHH-----cC-CCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999988875 23 599999999999988665
No 28
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=94.27 E-value=0.01 Score=50.62 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=40.3
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
...||.||-+.|++|.++|+-+|-.|+..+ . ||--++|.||+.+
T Consensus 23 k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-g------Rt~~q~knRw~~L 66 (73)
T 2llk_A 23 VGKYTPEEIEKLKELRIKHGNDWATIGAAL-G------RSASSVKDRCRLM 66 (73)
T ss_dssp CCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-T------SCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-C------CCHHHHHHHHHHH
Confidence 358999999999999999999999999987 2 9999999999965
No 29
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=94.20 E-value=0.016 Score=46.93 Aligned_cols=47 Identities=21% Similarity=0.393 Sum_probs=41.1
Q ss_pred cCCCCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
++...||.||...|.+++++|+. +|-.|+..+. .||--+.|+||+.+
T Consensus 6 ~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~------~Rt~~qcr~Rw~~~ 53 (60)
T 2d9a_A 6 SGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFP------NRTDQQCQYRWLRV 53 (60)
T ss_dssp CCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCS------SSCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcc------CCCHHHHHHHHHHH
Confidence 34467999999999999999995 9999999873 39999999999865
No 30
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=94.19 E-value=0.017 Score=47.02 Aligned_cols=47 Identities=17% Similarity=0.334 Sum_probs=40.9
Q ss_pred cCCCCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
+....||.||-..|.++++.|+. +|-.|+.... .||-.+.++||...
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~------~Rt~~qcr~r~~~~ 53 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMC------TKTKEECEKHYMKY 53 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHT------TSCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhC------CCCHHHHHHHHHHH
Confidence 34568999999999999999995 9999998873 39999999999864
No 31
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=94.01 E-value=0.023 Score=51.66 Aligned_cols=51 Identities=20% Similarity=0.244 Sum_probs=43.4
Q ss_pred CCCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
-..||.||+..|.+.+++|+- +|--|...|.. .+ ..||--|||+||....+
T Consensus 13 r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~-~f-~~RT~v~lKdrWrnllk 64 (105)
T 2aje_A 13 RRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFE-DA-DHRTYVDLKDKWKTLVH 64 (105)
T ss_dssp CCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSS-ST-TCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCChHHHHHHhcc-cc-CCCCHHHHHHHHHHHHh
Confidence 347999999999999999998 99999987631 23 35999999999988876
No 32
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.77 E-value=0.015 Score=49.25 Aligned_cols=54 Identities=22% Similarity=0.283 Sum_probs=45.6
Q ss_pred CCCCCChhHHHHHHHHhhhcC------cceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q psy15137 142 QSPTWTRAETDHLFDLCHRFD------LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMR 201 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fd------lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~r 201 (774)
....||.||-..|.++.+.|+ -+|-.|+.-.. .||..+.++||.....++++..
T Consensus 7 ~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~------~Rt~~qcr~r~~~~l~~~~k~g 66 (75)
T 2yum_A 7 GNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELG------NRTAKQVASQVQKYFIKLTKAG 66 (75)
T ss_dssp CSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHS------SSCHHHHHHHHHHHHGGGSTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhC------CCCHHHHHHHHHHHHHHHHhcC
Confidence 345799999999999999999 79999998873 3999999999987776665543
No 33
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=93.66 E-value=0.027 Score=44.21 Aligned_cols=46 Identities=28% Similarity=0.418 Sum_probs=39.7
Q ss_pred CCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
....||.+|...|.++++.|+- +|-.|+..+ + .||-.+.++||+.+
T Consensus 2 ~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~-----~-~Rt~~qcr~Rw~~~ 48 (52)
T 1guu_A 2 GKTRWTREEDEKLKKLVEQNGTDDWKVIANYL-----P-NRTDVQCQHRWQKV 48 (52)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTS-----T-TCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc-----C-CCCHHHHHHHHHHH
Confidence 4568999999999999999998 999888873 3 49999999999765
No 34
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=93.65 E-value=0.015 Score=54.08 Aligned_cols=47 Identities=21% Similarity=0.396 Sum_probs=41.5
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
...||.||-..|+++.++|+-+|-.|+..+ + +||-.++|.||+...+
T Consensus 79 ~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l-----~-gRt~~~~k~r~~~~~~ 125 (128)
T 1h8a_C 79 KTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-----P-GRTDNAVKNHWNSTMR 125 (128)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSCHHHHGGGS-----T-TCCHHHHHHHHHTTTT
T ss_pred cccCCHHHHHHHHHHHHHHCcCHHHHHHHC-----C-CCCHHHHHHHHHHHHh
Confidence 458999999999999999999999999765 2 4999999999997654
No 35
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=93.57 E-value=0.025 Score=47.14 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=42.2
Q ss_pred CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
..||.||...|.+++++|+. +|-.|+..+.+ . .||--++|+||..+.+
T Consensus 11 ~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~---~-~Rt~~qcr~Rw~~~l~ 59 (69)
T 1ity_A 11 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKF---N-NRTSVMLKDRWRTMKK 59 (69)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCC---S-SCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCc---C-CCCHHHHHHHHHHHcC
Confidence 47999999999999999995 99999998842 1 4999999999998766
No 36
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=93.56 E-value=0.028 Score=52.57 Aligned_cols=49 Identities=22% Similarity=0.375 Sum_probs=42.7
Q ss_pred CCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLA 198 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~ 198 (774)
..||.||-..|+++..+|+-+|-.|+..+ + +||--++|.||++..++-+
T Consensus 55 ~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l-----~-gRt~~~~k~rw~~~l~~~~ 103 (131)
T 3zqc_A 55 HAWTPEEDETIFRNYLKLGSKWSVIAKLI-----P-GRTDNAIKNRWNSSISKRI 103 (131)
T ss_dssp SCCCHHHHHHHHHHHHHSCSCHHHHTTTS-----T-TCCHHHHHHHHHHTTGGGC
T ss_pred CCCCHHHHHHHHHHHHHHCcCHHHHHHHc-----C-CCCHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999765 2 4999999999998766543
No 37
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=93.47 E-value=0.033 Score=50.25 Aligned_cols=51 Identities=16% Similarity=0.294 Sum_probs=44.6
Q ss_pred CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHHHh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAK 451 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L~~ 451 (774)
...||.||...|++++..|+-+|-.|+..+ | .||-.++|+||+...+.+.+
T Consensus 53 ~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l-----~-gRt~~~~k~rw~~l~r~~~~ 103 (107)
T 2k9n_A 53 TDPWSPEEDMLLDQKYAEYGPKWNKISKFL-----K-NRSDNNIRNRWMMIARHRAK 103 (107)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSCHHHHHHHH-----S-SSCHHHHHHHHHHHHHHHHS
T ss_pred ccccCHHHHHHHHHHHHHhCcCHHHHHHHC-----C-CCCHHHHHHHHHHHHhhHHH
Confidence 469999999999999999999999988753 3 59999999999998877654
No 38
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=93.46 E-value=0.031 Score=47.56 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=41.2
Q ss_pred CCCCChhHHHHHHHHhhhcC----cceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fd----lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
...||.+|...|..+...|+ -||-.|+.... .||.++.|.||..+..
T Consensus 18 ~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vp------GRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 18 EEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP------SKSKEDCIARYKLLVS 68 (73)
T ss_dssp SCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS------SSCHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHH
Confidence 45799999999999999999 69999988862 4999999999987654
No 39
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=93.43 E-value=0.023 Score=52.99 Aligned_cols=52 Identities=25% Similarity=0.315 Sum_probs=44.9
Q ss_pred CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTL 197 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l 197 (774)
..||.||.+.|.+++++|+- +|--|...+.+. ++ .||--|||+||....+.-
T Consensus 18 ~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~-f~-~RT~v~lKdRWrnllk~~ 70 (121)
T 2juh_A 18 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDN-AD-HRTYVDLKDKWKTLVHTA 70 (121)
T ss_dssp CCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSC-CS-SCCSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccc-cC-CCCHHHHHHHHHHHHhhh
Confidence 47999999999999999998 999999887532 33 499999999999988753
No 40
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=93.26 E-value=0.036 Score=46.67 Aligned_cols=51 Identities=22% Similarity=0.137 Sum_probs=43.8
Q ss_pred cCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHH
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTL 449 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L 449 (774)
+....||.||...|+++.+.|+-+|-.|+..+ | .||..++|+||+......
T Consensus 7 ~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~-----~-~Rt~~q~k~r~~~~l~~~ 57 (72)
T 2cu7_A 7 GYSVKWTIEEKELFEQGLAKFGRRWTKISKLI-----G-SRTVLQVKSYARQYFKNK 57 (72)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHH-----S-SSCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHc-----C-CCCHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999998853 3 499999999999776554
No 41
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=93.20 E-value=0.03 Score=46.32 Aligned_cols=48 Identities=19% Similarity=0.331 Sum_probs=40.4
Q ss_pred CCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
-..||.||+..|.+++++|+- .|-.|+..+.. ..||-.++++||..+.
T Consensus 11 k~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~----~~Rt~~qcr~Rw~nl~ 59 (64)
T 3sjm_A 11 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPF----VNRTAVMIKDRWRTMK 59 (64)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCC----SSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHccCCCchHHHHhhcCC----CCCCHHHHHHHHHHHh
Confidence 358999999999999999995 89988876542 2599999999997654
No 42
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=92.94 E-value=0.039 Score=49.40 Aligned_cols=46 Identities=22% Similarity=0.421 Sum_probs=40.4
Q ss_pred CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
...||.||...|++++..|+-+|-.|+.. +| .||-.++|+||+...
T Consensus 56 ~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~-----l~-gRt~~~~k~rw~~~~ 101 (105)
T 1gv2_A 56 KTSWTEEEDRIIYQAHKRLGNRWAEIAKL-----LP-GRTDNAIKNHWNSTM 101 (105)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSCHHHHHTT-----CT-TCCHHHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHHHHHhCCCHHHHHHH-----cC-CCCHHHHHHHHHHHH
Confidence 46899999999999999999999888875 33 599999999998764
No 43
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=92.48 E-value=0.048 Score=44.05 Aligned_cols=47 Identities=23% Similarity=0.364 Sum_probs=40.2
Q ss_pred CCCCCChhHHHHHHHHhhhcC-cceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 142 QSPTWTRAETDHLFDLCHRFD-LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fd-lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
....||.||-..|.+++++|+ -+|-.|+.... ..||-.+.++||..+
T Consensus 8 ~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~-----~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 8 FDENWGADEELLLIDACETLGLGNWADIADYVG-----NARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHC-----SSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHC-----CCCCHHHHHHHHHHH
Confidence 346799999999999999999 69999988762 149999999999764
No 44
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=92.48 E-value=0.038 Score=51.52 Aligned_cols=51 Identities=25% Similarity=0.316 Sum_probs=42.9
Q ss_pred CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHT 196 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~ 196 (774)
..||.||.+.|.+++++|+- +|--|...+.. .+ ..||--|||+||....+.
T Consensus 32 ~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~-~~-~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 32 RPFTVAEVELLVEAVEHLGTGRWRDVKFRAFE-NV-HHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHS-SS-CCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCChHHHHHHhcc-cc-CCCCHHHHHHHHHHHHhh
Confidence 46999999999999999998 99999887521 12 359999999999888764
No 45
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=92.47 E-value=0.033 Score=47.42 Aligned_cols=47 Identities=17% Similarity=0.216 Sum_probs=41.5
Q ss_pred cCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
+....||.||...|++|..+|+-+|-.|+..+ .||-.++|+||+.+.
T Consensus 21 i~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-------gRt~~q~knRw~~L~ 67 (73)
T 2llk_A 21 NHVGKYTPEEIEKLKELRIKHGNDWATIGAAL-------GRSASSVKDRCRLMK 67 (73)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-------TSCHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-------CCCHHHHHHHHHHHH
Confidence 34579999999999999999999999999874 399999999998654
No 46
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=92.46 E-value=0.055 Score=42.42 Aligned_cols=47 Identities=23% Similarity=0.438 Sum_probs=39.7
Q ss_pred cCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
|....||.+|...|.++++.|+- +|-.|+..+ + .||-.+.++||...
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~-----~-~Rt~~qcr~Rw~~~ 48 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL-----K-GRIGKQCRERWHNH 48 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS-----T-TCCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHc-----C-CCCHHHHHHHHHHH
Confidence 34568999999999999999997 698888863 2 59999999999754
No 47
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=92.22 E-value=0.053 Score=43.83 Aligned_cols=48 Identities=23% Similarity=0.432 Sum_probs=40.9
Q ss_pred cCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
+....||.||...|.++++.|+. +|-.|+..+ + .||-.+.++||+.+-
T Consensus 6 ~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~-----~-~Rt~~qcr~Rw~~~l 54 (60)
T 2d9a_A 6 SGKVKWTHEEDEQLRALVRQFGQQDWKFLASHF-----P-NRTDQQCQYRWLRVL 54 (60)
T ss_dssp CCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHC-----S-SSCHHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc-----c-CCCHHHHHHHHHHHc
Confidence 45578999999999999999995 999888873 3 499999999997653
No 48
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=92.20 E-value=0.051 Score=47.37 Aligned_cols=50 Identities=22% Similarity=0.267 Sum_probs=41.5
Q ss_pred CCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHH
Q psy15137 397 TWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYT 448 (774)
Q Consensus 397 ~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~ 448 (774)
.||.||+..|.+.+++|+. +|-.|...|.. .++ .||-.|||+||....+.
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~-~~~-~RT~~~lKdrWrnllk~ 52 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFD-NAD-HRTYVDLKDKWKTLVHT 52 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCT-TCT-TSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhcc-ccC-CCCHHHHHHHHHHHHHh
Confidence 5999999999999999999 99888876431 133 69999999999887743
No 49
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=91.18 E-value=0.029 Score=49.29 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=43.7
Q ss_pred cCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHH
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTL 449 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L 449 (774)
+....||.+|...|+++...|+-+|-.|+... + .||..++++||+...+++
T Consensus 14 ~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l-----~-gRt~~q~k~r~~~~lrk~ 64 (89)
T 2ltp_A 14 LYFQGWTEEEMGTAKKGLLEHGRNWSAIARMV-----G-SKTVSQCKNFYFNYKKRQ 64 (89)
Confidence 45579999999999999999999999998862 3 599999999999776543
No 50
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=91.84 E-value=0.077 Score=47.20 Aligned_cols=52 Identities=17% Similarity=0.348 Sum_probs=44.4
Q ss_pred CCCChhHHHHHHHHhhhcC----cceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q psy15137 144 PTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMR 201 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fd----lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~r 201 (774)
..||.||-..|..+...|+ -||-.|+.... .||.++.|.||-.....+....
T Consensus 9 ~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vp------GRT~~q~k~ry~~l~~dv~~ie 64 (93)
T 2cjj_A 9 RPWSAKENKAFERALAVYDKDTPDRWANVARAVE------GRTPEEVKKHYEILVEDIKYIE 64 (93)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999997 68999988872 4999999999999988764443
No 51
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=91.58 E-value=0.076 Score=41.88 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=40.2
Q ss_pred CCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 396 PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 396 ~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
..||.||+..|.++++.|+. +|-.|+..+.. ..||-.++++||..+.
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~----~~Rt~~qcr~Rw~~~~ 50 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKF----NNRTSVMLKDRWRTMK 50 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCC----SSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCC----CCCCHHHHHHHHHHHH
Confidence 57999999999999999995 99998887542 1599999999998765
No 52
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=91.40 E-value=0.065 Score=43.50 Aligned_cols=47 Identities=17% Similarity=0.335 Sum_probs=39.9
Q ss_pred cCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
+....||.+|...|.++++.|+. +|-.|+... + .||..+.++||...
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~-----~-~Rt~~qcr~r~~~~ 53 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFGNWQDVANQM-----C-TKTKEECEKHYMKY 53 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHH-----T-TSCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHh-----C-CCCHHHHHHHHHHH
Confidence 44568999999999999999995 898888864 3 49999999999754
No 53
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.36 E-value=0.083 Score=43.52 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=42.4
Q ss_pred cCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHH
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTL 449 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L 449 (774)
+....||.||...|+++.+.|+-+|-.|+. +- .||-.+.++||.......
T Consensus 7 ~~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~------gRt~~qcr~Rw~~~l~~~ 56 (66)
T 2din_A 7 GKKTEWSREEEEKLLHLAKLMPTQWRTIAP-II------GRTAAQCLEHYEFLLDKA 56 (66)
T ss_dssp SSCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH------SSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc------CcCHHHHHHHHHHHhChH
Confidence 345689999999999999999999988888 42 399999999998776444
No 54
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.32 E-value=0.071 Score=44.45 Aligned_cols=48 Identities=15% Similarity=0.254 Sum_probs=41.9
Q ss_pred cCCCCCChhHHHHHHHHhhhcC-cceeEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15137 141 LQSPTWTRAETDHLFDLCHRFD-LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194 (774)
Q Consensus 141 l~~~~Wt~eETd~Lf~Lc~~fd-lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~ 194 (774)
++...||.||-..|.+++++|+ -+|-.|+.... .||-.+.++||+.+-
T Consensus 7 ~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~------~Rt~~qcr~Rw~~~L 55 (70)
T 2dim_A 7 GKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH------RKSAKQCKARWYEWL 55 (70)
T ss_dssp STTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHST------TCCHHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhc------CCCHHHHHHHHHHHc
Confidence 4456899999999999999999 79999999873 499999999998753
No 55
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=91.20 E-value=0.062 Score=46.33 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=39.0
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 192 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~ 192 (774)
...||.||...|.++.+.|+-+|--|+.... .||.++.++||..
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v~------~RT~~qcr~r~~~ 61 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYKDDWNKVSEHVG------SRTQDECILHFLR 61 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSSSCHHHHHHHHS------SCCHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHhCCCHHHHHHHcC------CCCHHHHHHHHHH
Confidence 4579999999999999999999999988762 3999999999964
No 56
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=91.18 E-value=0.048 Score=52.49 Aligned_cols=53 Identities=21% Similarity=0.407 Sum_probs=45.0
Q ss_pred HHhhcC----CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 137 YLQELQ----SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 137 Y~~~l~----~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
|..+|. ...||.||-.-|+++.++|+-+|-.|+..+ + +||-.++|.||++..+
T Consensus 100 w~~~l~p~~~~~~WT~eEd~~L~~~~~~~g~~W~~Ia~~l-----~-gRt~~~~knr~~~~~r 156 (159)
T 1h89_C 100 WHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-----P-GRTDNAIKNHWNSTMR 156 (159)
T ss_dssp HHHTTCTTSCCSCCCHHHHHHHHHHHHHHCSCHHHHHTTS-----T-TCCHHHHHHHHHTTTC
T ss_pred HHHHhCccccccCCChHHHHHHHHHHHHHCCCHHHHHHHC-----C-CCCHHHHHHHHHHHHh
Confidence 666664 358999999999999999999999999765 2 4999999999997654
No 57
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=91.03 E-value=0.095 Score=47.63 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=44.3
Q ss_pred hcCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhhH
Q psy15137 392 ELQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCY 447 (774)
Q Consensus 392 ~L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~ 447 (774)
...-..||.||+..|.+.+++|+- +|-.|...+.. .|+ .||--|||+||.....
T Consensus 10 rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~-~f~-~RT~v~lKdrWrnllk 64 (105)
T 2aje_A 10 RRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFE-DAD-HRTYVDLKDKWKTLVH 64 (105)
T ss_dssp CCCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSS-STT-CCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhcc-ccC-CCCHHHHHHHHHHHHh
Confidence 345679999999999999999999 99888886532 233 6999999999987763
No 58
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=90.89 E-value=0.089 Score=44.75 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=39.8
Q ss_pred CCCCCchhhhhHHHHHHhHcC----cceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fD----lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
....||.+|...|.++...|+ -||-.|+.. +| .||.++.++||..+.
T Consensus 17 ~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~-----vp-GRT~~qcr~Ry~~L~ 67 (73)
T 2cqr_A 17 AEEPWTQNQQKLLELALQQYPRGSSDCWDKIARC-----VP-SKSKEDCIARYKLLV 67 (73)
T ss_dssp SSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGG-----CS-SSCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHH-----cC-CCCHHHHHHHHHHHH
Confidence 346899999999999999998 688888876 23 599999999997665
No 59
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=90.83 E-value=0.078 Score=42.79 Aligned_cols=46 Identities=24% Similarity=0.378 Sum_probs=38.8
Q ss_pred CCCCchhhhhHHHHHHhHcC-cceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFD-LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fD-lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
...||.+|...|+++++.|+ -+|-.|+... +..||..+.++||..+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~-----~~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYV-----GNARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHH-----CSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHH-----CCCCCHHHHHHHHHHH
Confidence 46899999999999999999 6898887763 3359999999999654
No 60
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=90.60 E-value=0.12 Score=48.27 Aligned_cols=53 Identities=23% Similarity=0.456 Sum_probs=44.0
Q ss_pred HHhhhcC----CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 388 EYLQELQ----SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 388 eY~~~L~----~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
-|..+|. ...||.+|...|+++...|+-+|-.|+.. +| .||-.++|+||+...
T Consensus 43 Rw~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~-----l~-gRt~~~~k~rw~~~l 99 (131)
T 3zqc_A 43 RWFNHLDPAVVKHAWTPEEDETIFRNYLKLGSKWSVIAKL-----IP-GRTDNAIKNRWNSSI 99 (131)
T ss_dssp HHHHHTSTTCCCSCCCHHHHHHHHHHHHHSCSCHHHHTTT-----ST-TCCHHHHHHHHHHTT
T ss_pred HHhhccCccccCCCCCHHHHHHHHHHHHHHCcCHHHHHHH-----cC-CCCHHHHHHHHHHHH
Confidence 4555554 46899999999999999999999888875 23 599999999998766
No 61
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=90.33 E-value=0.13 Score=47.77 Aligned_cols=47 Identities=21% Similarity=0.416 Sum_probs=40.8
Q ss_pred CCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
....||.||...|+++...|+-+|-.|+.. +| .||-.++|+||+...
T Consensus 78 ~~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~-----l~-gRt~~~~k~r~~~~~ 124 (128)
T 1h8a_C 78 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKL-----LP-GRTDNAVKNHWNSTM 124 (128)
T ss_dssp CCSCCCHHHHHHHHHHHHHHCSCHHHHGGG-----ST-TCCHHHHHHHHHTTT
T ss_pred ccccCCHHHHHHHHHHHHHHCcCHHHHHHH-----CC-CCCHHHHHHHHHHHH
Confidence 346899999999999999999999988875 33 599999999998764
No 62
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=90.28 E-value=0.072 Score=49.62 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=46.1
Q ss_pred hcCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHH
Q psy15137 392 ELQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYT 448 (774)
Q Consensus 392 ~L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~ 448 (774)
...-..||.||++.|.+++++|+- +|-.|...+.+. |+ .||--|||+||......
T Consensus 14 rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~-f~-~RT~v~lKdRWrnllk~ 69 (121)
T 2juh_A 14 RRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDN-AD-HRTYVDLKDKWKTLVHT 69 (121)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSC-CS-SCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccc-cC-CCCHHHHHHHHHHHHhh
Confidence 345579999999999999999999 999888876542 33 69999999999888754
No 63
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=89.83 E-value=0.12 Score=43.10 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=41.5
Q ss_pred CCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
.-..||.||...|.++++.|+. +|-.|+..+.+ ..||-.++++||..+.
T Consensus 9 ~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~----~~Rt~~qcr~Rw~~~l 58 (69)
T 1ity_A 9 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKF----NNRTSVMLKDRWRTMK 58 (69)
T ss_dssp SCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCC----SSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCc----CCCCHHHHHHHHHHHc
Confidence 3468999999999999999995 99999887542 1599999999998765
No 64
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=89.30 E-value=0.17 Score=44.92 Aligned_cols=52 Identities=17% Similarity=0.315 Sum_probs=42.5
Q ss_pred CCCCchhhhhHHHHHHhHcC----cceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHHHhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKM 452 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fD----lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L~~~ 452 (774)
...||.+|...|..+...|+ -||-.|+.. .| .||.++.+.||......+..+
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~-----vp-GRT~~q~k~ry~~l~~dv~~i 63 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARA-----VE-GRTPEEVKKHYEILVEDIKYI 63 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHH-----ST-TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHH-----cC-CCCHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999996 578777776 34 499999999999887665443
No 65
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.45 E-value=0.17 Score=42.08 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=41.1
Q ss_pred cCCCCCchhhhhHHHHHHhHcC-cceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFD-LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fD-lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
++...||.+|...|.++++.|+ -+|-.|+... + .||..+.++||+.+-
T Consensus 7 ~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l-----~-~Rt~~qcr~Rw~~~L 55 (70)
T 2dim_A 7 GKGGVWRNTEDEILKAAVMKYGKNQWSRIASLL-----H-RKSAKQCKARWYEWL 55 (70)
T ss_dssp STTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHS-----T-TCCHHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHh-----c-CCCHHHHHHHHHHHc
Confidence 4567999999999999999999 6998888873 2 599999999997653
No 66
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.37 E-value=0.17 Score=41.26 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=37.9
Q ss_pred CCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 192 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~ 192 (774)
+.||.||-..+.+....|+=+|-.|+ ++- + .||+.|+..+||.
T Consensus 13 ~~WT~eE~~~F~~~~~~~gk~w~~Ia-~~l----~-~rt~~~~v~~Yy~ 55 (61)
T 2eqr_A 13 NVWTDHEKEIFKDKFIQHPKNFGLIA-SYL----E-RKSVPDCVLYYYL 55 (61)
T ss_dssp CSCCHHHHHHHHHHHHHSTTCHHHHH-HHC----T-TSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCHHHHH-HHc----C-CCCHHHHHHHHHH
Confidence 47999999999999999999999998 442 2 4999999999986
No 67
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=88.21 E-value=0.16 Score=43.31 Aligned_cols=45 Identities=16% Similarity=0.212 Sum_probs=37.3
Q ss_pred CCCCChhHHHHHHHHhhhcCc----ceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDL----RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdl----r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
+..||.+|-.-|-+-+..|+. ||-.|++.. + .||+||.+.||-..
T Consensus 8 ~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V-----~-gKT~eE~~~hY~~l 56 (73)
T 1wgx_A 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV-----G-SRSPEECQRKYMEN 56 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHT-----T-TSCHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHc-----C-CCCHHHHHHHHHHH
Confidence 457999999999999999997 677777665 2 39999999999754
No 68
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=87.96 E-value=0.25 Score=43.64 Aligned_cols=52 Identities=17% Similarity=0.349 Sum_probs=43.0
Q ss_pred CCCchhhhhHHHHHHhHcCc---ceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHHHHhhc
Q psy15137 396 PTWTRAETDHLFDLCHRFDL---RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMR 453 (774)
Q Consensus 396 ~~WtreETd~Lf~Lc~~fDl---R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~L~~~r 453 (774)
--|||+|..-++.-|++=+- .|.+|+-.. ..|+.+++++|||.....+.++.
T Consensus 34 vlWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L------~Nks~nqV~~RFq~Lm~Lf~~~~ 88 (95)
T 1ug2_A 34 VLWTREADRVILTMCQEQGAQPHTFSVISQQL------GNKTPVEVSHRFRELMQLFHTAC 88 (95)
T ss_dssp SSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHCS
T ss_pred EEeccccCHHHHHHHHhcCCChhHHHHHHHHH------ccCCHHHHHHHHHHHHHHHHHHh
Confidence 37999999999999999876 787777763 25999999999999987666654
No 69
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=87.90 E-value=0.27 Score=45.81 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=46.2
Q ss_pred HHhhhcCCCCCchhhhhHHHHHHhHcCc-ceeEEEcccCCCCCCCCCCHHHHHhhhhhhhHH
Q psy15137 388 EYLQELQSPTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYT 448 (774)
Q Consensus 388 eY~~~L~~~~WtreETd~Lf~Lc~~fDl-R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~ 448 (774)
+....-.-..||.||++.|.+.+++|+- +|-.|...+.. .| ..||--|||+||......
T Consensus 24 ~~~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~-~~-~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 24 DFGQRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFE-NV-HHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHS-SS-CCCCHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhcc-cc-CCCCHHHHHHHHHHHHhh
Confidence 3344455679999999999999999998 99888876421 13 369999999999877743
No 70
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.81 E-value=0.1 Score=44.02 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=40.3
Q ss_pred cCCCCCchhhhhHHHHHHhHcC------cceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFD------LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fD------lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
+....||.||...|.++.+.|+ -+|-.|+... + .||..+.++||....
T Consensus 6 ~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~-----~-~Rt~~qcr~r~~~~l 59 (75)
T 2yum_A 6 SGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADEL-----G-NRTAKQVASQVQKYF 59 (75)
T ss_dssp CCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHH-----S-SSCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHh-----C-CCCHHHHHHHHHHHH
Confidence 3456899999999999999999 7999888863 3 499999999996444
No 71
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=87.55 E-value=0.15 Score=43.12 Aligned_cols=45 Identities=20% Similarity=0.363 Sum_probs=37.5
Q ss_pred CCCCChhHHHHHHHHhhhcC----cceeEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fd----lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~ 194 (774)
...||.||-..|-.++..|+ =||-.|+.-. .||++|.|.||=...
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-------gRt~~eV~~~y~~L~ 56 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-------GRSVTDVTTKAKQLK 56 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-------TSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-------CCCHHHHHHHHHHHH
Confidence 35799999999999999997 5888888764 299999999875443
No 72
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=86.41 E-value=0.3 Score=46.84 Aligned_cols=47 Identities=21% Similarity=0.423 Sum_probs=40.9
Q ss_pred CCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
....||.+|...|+++...|+-+|..|+.. +| .||-.++|.||+...
T Consensus 109 ~~~~WT~eEd~~L~~~~~~~g~~W~~Ia~~-----l~-gRt~~~~knr~~~~~ 155 (159)
T 1h89_C 109 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKL-----LP-GRTDNAIKNHWNSTM 155 (159)
T ss_dssp CCSCCCHHHHHHHHHHHHHHCSCHHHHHTT-----ST-TCCHHHHHHHHHTTT
T ss_pred cccCCChHHHHHHHHHHHHHCCCHHHHHHH-----CC-CCCHHHHHHHHHHHH
Confidence 457899999999999999999999988875 33 599999999998754
No 73
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=86.15 E-value=0.18 Score=43.35 Aligned_cols=46 Identities=17% Similarity=0.269 Sum_probs=39.6
Q ss_pred CCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 394 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 394 ~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
....||.+|...|.++.+.|+-+|-.|+... + .||.++.++||...
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v-----~-~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYKDDWNKVSEHV-----G-SRTQDECILHFLRL 62 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSSSCHHHHHHHH-----S-SCCHHHHHHHHTTS
T ss_pred cCCCcCHHHHHHHHHHHHHhCCCHHHHHHHc-----C-CCCHHHHHHHHHHh
Confidence 4579999999999999999998898888753 3 49999999999755
No 74
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=83.73 E-value=0.44 Score=42.07 Aligned_cols=50 Identities=18% Similarity=0.417 Sum_probs=40.3
Q ss_pred CCChhHHHHHHHHhhhcCc---ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q psy15137 145 TWTRAETDHLFDLCHRFDL---RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKM 200 (774)
Q Consensus 145 ~Wt~eETd~Lf~Lc~~fdl---r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~ 200 (774)
-|||||-.-++.-|++=+- +|.+|+-.-. +||-+++++|||...+-+-..
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~------Nks~nqV~~RFq~Lm~Lf~~~ 87 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQLG------NKTPVEVSHRFRELMQLFHTA 87 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHC
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHHc------cCCHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999765 7777666652 399999999999998744333
No 75
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=82.25 E-value=0.45 Score=40.50 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=35.0
Q ss_pred CCCCchhhhhHHHHHHhHcCc----ceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDL----RFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDl----R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
+..||++|...|-.-+..|+. ||-.|++. .|. ||+||.+.||-..
T Consensus 8 ~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~-----V~g-KT~eE~~~hY~~l 56 (73)
T 1wgx_A 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAA-----VGS-RSPEECQRKYMEN 56 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHH-----TTT-SCHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHH-----cCC-CCHHHHHHHHHHH
Confidence 468999999999898999987 56555554 343 9999999888544
No 76
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.20 E-value=0.54 Score=38.20 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=37.9
Q ss_pred CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 444 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~ 444 (774)
...||.+|-..+.+....|+=+|-.|+.. .| .||+.++.++||.
T Consensus 12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~-----l~-~rt~~~~v~~Yy~ 55 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHPKNFGLIASY-----LE-RKSVPDCVLYYYL 55 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHSTTCHHHHHHH-----CT-TSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCHHHHHHH-----cC-CCCHHHHHHHHHH
Confidence 36899999999999999999999888843 23 5999999988885
No 77
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=80.99 E-value=0.44 Score=40.30 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=35.6
Q ss_pred CCCCchhhhhHHHHHHhHcC----cceeEEEcccCCCCCCCCCCHHHHHhhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFD----LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fD----lR~ivI~DRy~~~~~~~~RtvEDLK~RYY~V 445 (774)
...||.+|...|-.++..|+ =||-.|+... .||++|++.||-..
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-------gRt~~eV~~~y~~L 55 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-------GRSVTDVTTKAKQL 55 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-------TSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-------CCCHHHHHHHHHHH
Confidence 46899999999999999997 5777777652 39999999877433
No 78
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=79.13 E-value=0.56 Score=39.90 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=31.7
Q ss_pred CCCChhHHHHHHHHhhhcCc----ceeEEEeccCCCCCCCCCCHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDL----RFIVIHDRYDTNKFPTSRTIEDLKQRY 190 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdl----r~~vI~DRy~~~~~~~~Rt~EdLK~Ry 190 (774)
..||++|-.-|=.....|+- ||-.|+... ++||+||.|.+|
T Consensus 21 ~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~V------pGKT~eEVk~hY 65 (74)
T 4eef_G 21 RPWKFSENIAFEIALSFTNKDTPDRWKKVAQYV------KGRTPEEVKKHY 65 (74)
T ss_dssp -CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGS------CSSCHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHc------CCCCHHHHHHHH
Confidence 47999999999889999998 454444443 249999999887
No 79
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=77.58 E-value=0.56 Score=39.29 Aligned_cols=44 Identities=14% Similarity=0.363 Sum_probs=37.6
Q ss_pred CCCchhhhhHHHHHHhHcCc---ceeEEEcccCCCCCCCCCCHHHHHhhhhhhh
Q psy15137 396 PTWTRAETDHLFDLCHRFDL---RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 446 (774)
Q Consensus 396 ~~WtreETd~Lf~Lc~~fDl---R~ivI~DRy~~~~~~~~RtvEDLK~RYY~V~ 446 (774)
--|||||..-++.-|++=+- .|..|+-.. .||.+++++||-...
T Consensus 15 vlWTReeDR~IL~~cq~~G~s~~tfa~iA~~L-------nks~~QV~~RF~~Lm 61 (70)
T 2lr8_A 15 ILWTRNDDRVILLECQKRGPSSKTFAYLAAKL-------DKNPNQVSERFQQLM 61 (70)
Confidence 36999999999999999888 898888763 489999999996554
No 80
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=75.34 E-value=3.6 Score=42.09 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=62.5
Q ss_pred HHHHHHHHhhhHHHHHHhhhhccccCCCCccccCCcccccccccccCCchHHhhhcCCCCCchhhhhHHHHHHhHcCcce
Q psy15137 338 LYELKQALDNYQFELQSLKHQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRF 417 (774)
Q Consensus 338 L~elrka~~~~E~El~~lr~~~ea~~~~~~~~~p~~~~~~t~~v~~ytd~eY~~~L~~~~WtreETd~Lf~Lc~~fDlR~ 417 (774)
|.-|++++++..+-+..|+++.+..... +-.| ++-. -....||.+|...+.+..+.|+-.|
T Consensus 95 i~sLkrqIq~~kQ~~~~L~~~~~~~Ie~--~R~p------------e~~~-----k~s~~WTeEE~~lFleAl~kYGKDW 155 (235)
T 2iw5_B 95 LVSVKRQIQNIKQTNSALKEKLDGGIEP--YRLP------------EVIQ-----KCNARWTTEEQLLAVQAIRKYGRDF 155 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTTTGG--GCCC------------CCCC-----CCCSSCCHHHHHHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc--ccCC------------CCCC-----ccCCCCCHHHHHHHHHHHHHHCcCH
Confidence 6677888888888888888888643211 0001 1111 2367999999999999999999999
Q ss_pred eEEEcccCCCCCCCCCCHHHHHhhhhhhhHH
Q psy15137 418 IVIHDRYDTNKFPTSRTIEDLKQRYYFVCYT 448 (774)
Q Consensus 418 ivI~DRy~~~~~~~~RtvEDLK~RYY~V~~~ 448 (774)
-.|+.-. + .||+.+.|..||.--++
T Consensus 156 ~~IAk~V-----g-TKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 156 QAISDVI-----G-NKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp HHHHHHH-----S-SCCHHHHHHHHHHTTTT
T ss_pred HHHHHHc-----C-CCCHHHHHHHHHHHHHH
Confidence 9988852 2 49999999999855543
No 81
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=68.83 E-value=1.6 Score=37.22 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=30.2
Q ss_pred CCCCchhhhhHHHHHHhHcCcceeEEEcccCCCC--CCCCCCHHHHHhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNK--FPTSRTIEDLKQRY 442 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~--~~~~RtvEDLK~RY 442 (774)
+..||++|-..|=.....|+--- -|||+..- .| .+|++|++.+|
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~t---pdRWekIA~~Vp-GKT~eEVk~hY 65 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDT---PDRWKKVAQYVK-GRTPEEVKKHY 65 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSC---CSSSTTTGGGSC-SSCHHHHHGGG
T ss_pred CCCCCHHHHHHHHHHHHHCCCCC---CcHHHHHHHHcC-CCCHHHHHHHH
Confidence 45899999887777788888743 35665321 24 49999999555
No 82
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=66.04 E-value=1.6 Score=36.52 Aligned_cols=44 Identities=14% Similarity=0.388 Sum_probs=36.5
Q ss_pred CCChhHHHHHHHHhhhcCc---ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 145 TWTRAETDHLFDLCHRFDL---RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 145 ~Wt~eETd~Lf~Lc~~fdl---r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
-||+||-.-++.-|++=+- .|..|+-.- +||-+++++||=...+
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~L-------nks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKL-------DKNPNQVSERFQQLMK 62 (70)
Confidence 4999999999999999887 888888554 2889999999866544
No 83
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=56.12 E-value=3.6 Score=42.11 Aligned_cols=45 Identities=16% Similarity=0.280 Sum_probs=39.6
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
...||.||...+.+..+.|+=.|--|+.-- + .||+.+.|..||.-
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~V-----g-TKT~~QcKnfY~~~ 177 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDVI-----G-NKSVVQVKNFFVNY 177 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH-----S-SCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc-----C-CCCHHHHHHHHHHH
Confidence 567999999999999999999999998874 2 49999999999843
No 84
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.26 E-value=7.6 Score=31.65 Aligned_cols=45 Identities=18% Similarity=0.354 Sum_probs=36.4
Q ss_pred CCCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHH
Q psy15137 142 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYY 191 (774)
Q Consensus 142 ~~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY 191 (774)
..+.||.||.....+-...|+=.|.-|+--+- +.||+.|+..=||
T Consensus 8 ~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-----~~Kt~~~~v~fYY 52 (63)
T 2yqk_A 8 IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELL-----PNKETGELITFYY 52 (63)
T ss_dssp CCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSC-----TTSCHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHhCccHHHHHHHHc-----CCCcHHHHHHHHh
Confidence 45789999999888999999999988864231 2499999997777
No 85
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=38.34 E-value=13 Score=34.79 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=23.6
Q ss_pred HHHHHcC--CCCCChHHHHHHHHHHHHHH
Q psy15137 309 QTLIDLG--LNPIPTEEIVTHYNELRSDM 335 (774)
Q Consensus 309 ~~L~elg--~~p~pT~~ic~~~n~LR~di 335 (774)
+.|.+.| +..|+|.+.|..||-|.++.
T Consensus 85 ~~l~~~GI~vE~m~T~aAcrTyNiL~~Eg 113 (132)
T 2gm2_A 85 AACLTRGIGLEAMTNAAAARTYNVLASEG 113 (132)
T ss_dssp HHHHHHTCEEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeCHHHHHHHHHHHHhCC
Confidence 7899999 55799999999999998763
No 86
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=37.72 E-value=44 Score=34.56 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCC
Q psy15137 600 EYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGH 633 (774)
Q Consensus 600 ~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~D 633 (774)
.+...+...|..++++++||+||.-.|.|.|.++
T Consensus 131 ~~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpDH 164 (273)
T 3dff_A 131 DLVGEVADDIRSIIDEFDPTLVVTCAAIGEHPDH 164 (273)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECCCCCCChHH
Confidence 4566777778889999999999999999988765
No 87
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=37.55 E-value=13 Score=34.95 Aligned_cols=27 Identities=19% Similarity=0.353 Sum_probs=23.5
Q ss_pred HHHHHcC--CCCCChHHHHHHHHHHHHHH
Q psy15137 309 QTLIDLG--LNPIPTEEIVTHYNELRSDM 335 (774)
Q Consensus 309 ~~L~elg--~~p~pT~~ic~~~n~LR~di 335 (774)
+.|.+.| +..|+|.+.|..||-|.++.
T Consensus 88 ~~l~~~GI~vE~M~T~aAcrTyNiL~~Eg 116 (135)
T 2fvt_A 88 EALRGVNVVLDTMQTGPAIRTYNIMIGER 116 (135)
T ss_dssp HHHHTTTCEEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeCHHHHHHHHHHHHhCC
Confidence 7899999 55799999999999998763
No 88
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=35.26 E-value=14 Score=34.19 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=23.5
Q ss_pred HHHHHcC--CCCCChHHHHHHHHHHHHHH
Q psy15137 309 QTLIDLG--LNPIPTEEIVTHYNELRSDM 335 (774)
Q Consensus 309 ~~L~elg--~~p~pT~~ic~~~n~LR~di 335 (774)
+.|.+.| +..|+|.+.|..||-|.++.
T Consensus 89 ~~l~~~GI~vE~m~T~aAcrtyNiL~~Eg 117 (128)
T 2fi9_A 89 VLLWEKRISSDTMSTGAAVRTFNVLLAED 117 (128)
T ss_dssp HHHHHTTCEEEEECHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCEEEEeCHHHHHHHHHHHHhCC
Confidence 7899999 55799999999999998763
No 89
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=34.51 E-value=15 Score=33.85 Aligned_cols=26 Identities=31% Similarity=0.466 Sum_probs=23.0
Q ss_pred HHHHHcC--CCCCChHHHHHHHHHHHHH
Q psy15137 309 QTLIDLG--LNPIPTEEIVTHYNELRSD 334 (774)
Q Consensus 309 ~~L~elg--~~p~pT~~ic~~~n~LR~d 334 (774)
+.|++.| +..|+|.+.|..||-|.++
T Consensus 83 ~~l~~~gI~ve~m~T~~A~rtyN~L~~E 110 (122)
T 2ab1_A 83 EYLKKHGIDVRVLQTEQAVKEYNALVAQ 110 (122)
T ss_dssp HHHHHTTCEEEEECHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeCHHHHHHHHHHHHhC
Confidence 7899999 5579999999999999875
No 90
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=34.13 E-value=61 Score=33.33 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEecCCCCCCCC
Q psy15137 599 AEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGH 633 (774)
Q Consensus 599 ~~yl~af~~vl~pi~~~f~PdlIlVsaGfDa~~~D 633 (774)
..+...+...|..++++++||+|+.-.|.|.|.++
T Consensus 127 ~~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpDH 161 (270)
T 3dfi_A 127 HDLVAAIREDIESMIAECDPTLVLTCVAIGKHPDH 161 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEeCCCCCCChhH
Confidence 34556677778899999999999999999988665
No 91
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=33.20 E-value=24 Score=30.03 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=42.9
Q ss_pred CCCCChhHHHHHHHHhhhcCcce----------eEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCC
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRF----------IVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMRGT 203 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~----------~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l~~~r~~ 203 (774)
.+.||.+||.-|+++....+.+| -.|+++-...++ .||.+..++++=.+.+.+-..+..
T Consensus 4 ~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~--~rs~~qC~~K~~nL~k~Yk~~k~~ 72 (86)
T 2ebi_A 4 AETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGF--DRSPDMCTDKWRNLLKEFKKAKHH 72 (86)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHCSCSSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 36799999999999999877764 333333211112 399999999998888888877765
No 92
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=31.68 E-value=2.4e+02 Score=23.99 Aligned_cols=22 Identities=9% Similarity=-0.165 Sum_probs=18.4
Q ss_pred CeeEEEeccCcCcchHHHHhhc
Q psy15137 526 QYFPFRCWDVHHGNGTQQIFYS 547 (774)
Q Consensus 526 ~RVlIVD~DvHHGnGTq~iF~~ 547 (774)
-||+|||=|.....+.+.++..
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~ 29 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISN 29 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHT
T ss_pred cEEEEEeCCHHHHHHHHHHHHh
Confidence 5799999988888888888864
No 93
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=30.83 E-value=4.3e+02 Score=26.64 Aligned_cols=16 Identities=6% Similarity=-0.251 Sum_probs=13.0
Q ss_pred cCeeEEEeccCcCcch
Q psy15137 525 TQYFPFRCWDVHHGNG 540 (774)
Q Consensus 525 ~~RVlIVD~DvHHGnG 540 (774)
.+||++||.|...++-
T Consensus 111 G~rVLLID~D~~~~~l 126 (271)
T 3bfv_A 111 GYKTLIVDGDMRKPTQ 126 (271)
T ss_dssp TCCEEEEECCSSSCCH
T ss_pred CCeEEEEeCCCCCccH
Confidence 3689999999987653
No 94
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=30.58 E-value=1.5e+02 Score=30.46 Aligned_cols=15 Identities=13% Similarity=0.137 Sum_probs=12.7
Q ss_pred cCeeEEEeccCcCcc
Q psy15137 525 TQYFPFRCWDVHHGN 539 (774)
Q Consensus 525 ~~RVlIVD~DvHHGn 539 (774)
.+||++||.|...|+
T Consensus 121 G~rVLLID~D~~~~~ 135 (286)
T 3la6_A 121 NKRVLLIDCDMRKGY 135 (286)
T ss_dssp TCCEEEEECCTTTCC
T ss_pred CCCEEEEeccCCCCC
Confidence 368999999998765
No 95
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=30.42 E-value=22 Score=29.49 Aligned_cols=48 Identities=15% Similarity=0.342 Sum_probs=38.7
Q ss_pred CCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTL 197 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~~l 197 (774)
+.||.||.....+-...|+=.|.-|+--+- +.+|+.|+..=|| ..++-
T Consensus 9 ~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-----~~Kt~~~~v~fYY-~wKkt 56 (70)
T 2crg_A 9 EEWSASEACLFEEALEKYGKDFNDIRQDFL-----PWKSLTSIIEYYY-MWKTT 56 (70)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-----SSSCHHHHHHHHH-HHHTC
T ss_pred CCCCHHHHHHHHHHHHHhCccHHHHHHHHc-----CCCCHHHHHHHHH-hhcCC
Confidence 579999998888889999999999974342 2499999998888 56543
No 96
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.89 E-value=23 Score=28.68 Aligned_cols=46 Identities=20% Similarity=0.412 Sum_probs=35.8
Q ss_pred cCCCCCchhhhhHHHHHHhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhh
Q psy15137 393 LQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYY 443 (774)
Q Consensus 393 L~~~~WtreETd~Lf~Lc~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY 443 (774)
+..+.||.+|...-.+-...|+=.|--|+.-+ .+ .+|+.|+.+-||
T Consensus 7 ~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~----v~-~Kt~~~~v~fYY 52 (63)
T 2yqk_A 7 GIEKCWTEDEVKRFVKGLRQYGKNFFRIRKEL----LP-NKETGELITFYY 52 (63)
T ss_dssp CCCCSCCHHHHHHHHHHHHHTCSCHHHHHHHS----CT-TSCHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHhCccHHHHHHHH----cC-CCcHHHHHHHHh
Confidence 44579999999988888999999987776421 12 599999996666
No 97
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.70 E-value=65 Score=30.87 Aligned_cols=27 Identities=30% Similarity=0.596 Sum_probs=18.5
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEecCCC
Q psy15137 598 DAEYLAAFRTIVMPVAKEFDPQIVLVSAGFD 628 (774)
Q Consensus 598 D~~yl~af~~vl~pi~~~f~PdlIlVsaGfD 628 (774)
-.+.+.-|...+ -.++||+|+|..|..
T Consensus 63 t~~~l~r~~~~v----~~~~Pd~vvi~~G~N 89 (209)
T 4hf7_A 63 SYQFLLRFREDV----INLSPALVVINAGTN 89 (209)
T ss_dssp HHHHHHHHHHHT----GGGCCSEEEECCCHH
T ss_pred HHHHHHHHHHHH----HhcCCCEEEEEeCCC
Confidence 345555555433 457999999999973
No 98
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=27.74 E-value=24 Score=36.40 Aligned_cols=47 Identities=17% Similarity=0.353 Sum_probs=39.3
Q ss_pred CCCCChhHHHHHHHHhhhcCcc------eeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLR------FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr------~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
-..||.||-..|+++.++|.-+ |-.|+- +- ++||--.+|+||..--+
T Consensus 8 k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk-~L-----pGRT~nsIRnRw~~~L~ 60 (246)
T 1ign_A 8 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISH-YV-----PNHTGNSIRHRFRVYLS 60 (246)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTT-TS-----TTSCHHHHHHHHHHTTG
T ss_pred CCCCCHHHHHHHHHHHHHhCcCccccccHHHHHH-Hc-----CCCCHHHHHHHHHHHHh
Confidence 3579999999999999999887 999984 32 24999999999988433
No 99
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=27.71 E-value=31 Score=33.99 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=30.9
Q ss_pred CCCChhHHHHHHHHhhhcC---cceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Q psy15137 144 PTWTRAETDHLFDLCHRFD---LRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 193 (774)
Q Consensus 144 ~~Wt~eETd~Lf~Lc~~fd---lr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v 193 (774)
.+||+.|+..|..-|.+|+ -||=-|..- .... .+|.||+++ ||.+
T Consensus 8 ~~~t~~E~r~fira~~kfG~~~~r~~~I~~d---a~L~-~Ks~~~v~~-y~~~ 55 (211)
T 4b4c_A 8 KGFSDAEIRRFIKSYKKFGGPLERLDAIARD---AELV-DKSETDLRR-LGEL 55 (211)
T ss_dssp CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHH---TTCT-TSCHHHHHH-HHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCchhHHHHHHHH---hccC-CCCHHHHHH-HHHH
Confidence 3799999999999999998 244333221 1122 389999995 5554
No 100
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=26.56 E-value=23 Score=36.48 Aligned_cols=44 Identities=18% Similarity=0.405 Sum_probs=37.7
Q ss_pred CCCCchhhhhHHHHHHhHcCcc------eeEEEcccCCCCCCCCCCHHHHHhhhhh
Q psy15137 395 SPTWTRAETDHLFDLCHRFDLR------FIVIHDRYDTNKFPTSRTIEDLKQRYYF 444 (774)
Q Consensus 395 ~~~WtreETd~Lf~Lc~~fDlR------~ivI~DRy~~~~~~~~RtvEDLK~RYY~ 444 (774)
-..||.||...|+++.+++.-+ |-.|+-- .| .||-..+|+||..
T Consensus 8 k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~-----Lp-GRT~nsIRnRw~~ 57 (246)
T 1ign_A 8 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHY-----VP-NHTGNSIRHRFRV 57 (246)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTT-----ST-TSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHH-----cC-CCCHHHHHHHHHH
Confidence 3589999999999999999887 8888753 23 5999999999976
No 101
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=26.46 E-value=2.4e+02 Score=26.16 Aligned_cols=29 Identities=17% Similarity=0.382 Sum_probs=20.2
Q ss_pred CCcHHHHHHHHHHHHHHHHhcCCCEEEEecCCC
Q psy15137 596 MGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFD 628 (774)
Q Consensus 596 ~gD~~yl~af~~vl~pi~~~f~PdlIlVsaGfD 628 (774)
++....+..+.. .+...+||+|+|..|..
T Consensus 57 ~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~N 85 (200)
T 4h08_A 57 VGDPALIEELAV----VLKNTKFDVIHFNNGLH 85 (200)
T ss_dssp TTCHHHHHHHHH----HHHHSCCSEEEECCCSS
T ss_pred ccHHHHHHHHHH----HHhcCCCCeEEEEeeeC
Confidence 445555555544 34578999999999964
No 102
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=25.42 E-value=76 Score=35.83 Aligned_cols=90 Identities=18% Similarity=0.250 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhhhccccCCCCccccCCcccccccccccCCchHHhhhcCCCCCchhhhhHHHHH
Q psy15137 330 ELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDL 409 (774)
Q Consensus 330 ~LR~di~~L~elrka~~~~E~El~~lr~~~ea~~~~~~~~~p~~~~~~t~~v~~ytd~eY~~~L~~~~WtreETd~Lf~L 409 (774)
.||.--.-|..|++++++..+....|+..... + +.+.. +....+ -....||.+|...+.+.
T Consensus 334 ~l~~~d~el~slk~qvq~~kq~~s~~~~~~~~---g----~~~~r--~~e~~~----------~~~~~WT~eE~~~f~~a 394 (482)
T 2xag_B 334 VLRQLDMELVSVKRQIQNIKQTNSALKEKLDG---G----IEPYR--LPEVIQ----------KCNARWTTEEQLLAVQA 394 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---T----TGGGC--CCCCCC----------CCCSCCCHHHHHHHHHH
T ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHHhhhc---c----ccccc--CCcccc----------ccCCCCCHHHHHHHHHH
Confidence 34544455788888888888888888665532 1 11111 110101 24589999999999999
Q ss_pred HhHcCcceeEEEcccCCCCCCCCCCHHHHHhhhhh
Q psy15137 410 CHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 444 (774)
Q Consensus 410 c~~fDlR~ivI~DRy~~~~~~~~RtvEDLK~RYY~ 444 (774)
.+.|+=.|--|++-. ..+|+...|..||.
T Consensus 395 l~~yGkdw~~IA~~V------gTKT~~Qvk~fy~~ 423 (482)
T 2xag_B 395 IRKYGRDFQAISDVI------GNKSVVQVKNFFVN 423 (482)
T ss_dssp HHHHTTCHHHHHHHH------SSCCHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHh------CCCCHHHHHHHHHH
Confidence 999999998888752 24899999976653
No 103
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=21.01 E-value=1.6e+02 Score=24.37 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q psy15137 324 IVTHYNELRSDMVLLYELKQALDNYQFELQSLK 356 (774)
Q Consensus 324 ic~~~n~LR~di~~L~elrka~~~~E~El~~lr 356 (774)
+...-..|+..-.-+.++|+.++.++.||+++|
T Consensus 44 ~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 44 ANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334455666666778899999999999999987
No 104
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=20.86 E-value=1.5e+02 Score=31.37 Aligned_cols=60 Identities=17% Similarity=0.271 Sum_probs=41.6
Q ss_pred ccccCHHH---HHhhcCC--CCCChhHHHHHHHHhhhcCc-ceeEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q psy15137 129 IPTYTDTE---YLQELQS--PTWTRAETDHLFDLCHRFDL-RFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCH 195 (774)
Q Consensus 129 i~~yt~ee---Y~~~l~~--~~Wt~eETd~Lf~Lc~~fdl-r~~vI~DRy~~~~~~~~Rt~EdLK~RyY~v~~ 195 (774)
...+|+|| -+++|.. .+||+.+-.....-|.+|+- .|--|+.= . .+.|+||+ .|||.|-=
T Consensus 91 ~~~LTeeE~~eKe~Ll~eGF~~W~rrdf~~Fi~a~~kyGr~~~~~IA~e-----v-~~Kt~eEV-~~Y~~vFw 156 (304)
T 1ofc_X 91 AEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKD-----V-EGKTPEEV-IEYNAVFW 156 (304)
T ss_dssp CCCCCHHHHHHHHHHTTSSCTTCCHHHHHHHHHHHHHHCTTCHHHHTTS-----S-TTCCHHHH-HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHHhCHHHHHHHHHH-----h-cCCCHHHH-HHHHHHHH
Confidence 44589887 5677765 48999999999999999984 11112211 1 23788888 77877754
No 105
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=20.18 E-value=43 Score=29.36 Aligned_cols=44 Identities=16% Similarity=0.318 Sum_probs=37.5
Q ss_pred CCCCChhHHHHHHHHhhhcCcceeEEEeccCCCCCCCCCCHHHHHHHHHH
Q psy15137 143 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 192 (774)
Q Consensus 143 ~~~Wt~eETd~Lf~Lc~~fdlr~~vI~DRy~~~~~~~~Rt~EdLK~RyY~ 192 (774)
-+.||.||-....+-...|+=.|..|++-- +.||+.|+-+=||.
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l------~~Kt~~~cV~~YY~ 86 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFL------ERKTVAECVLYYYL 86 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTC------TTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHc------CCCCHHHHHHHHhc
Confidence 367999999999999999999999996543 24999999998884
Done!