Your job contains 1 sequence.
>psy15137
MTSDIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNR
DAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYPF
ARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTS
RTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEE
QMLLAELKKIEIRRKERDRKTQDLQKLMTAADMQADNRKTDKKMPPKRKLTHQIRPRSLD
TSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYE
AVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVI
HDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKR
LFERTPEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNG
TQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAE
YLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADG
KVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTIAIQVS
HWPVLKRSAHTITWSALSAAEDNETVSAMASLSMNKKHLQVEDLLCTIPMMDIL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15137
(774 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q1LZ99 - symbol:DMAP1 "DNA methyltransferase 1 ... 837 2.3e-99 2
UNIPROTKB|E2R9T9 - symbol:DMAP1 "Uncharacterized protein"... 837 2.3e-99 2
UNIPROTKB|Q9NPF5 - symbol:DMAP1 "DNA methyltransferase 1-... 837 2.3e-99 2
MGI|MGI:1913483 - symbol:Dmap1 "DNA methyltransferase 1-a... 837 2.3e-99 2
RGD|1311295 - symbol:Dmap1 "DNA methyltransferase 1-assoc... 834 4.7e-99 2
ZFIN|ZDB-GENE-040426-748 - symbol:dmap1 "DNA methyltransf... 838 6.0e-99 2
UNIPROTKB|F1LX38 - symbol:F1LX38 "Uncharacterized protein... 798 9.9e-95 2
FB|FBgn0034537 - symbol:DMAP1 "DMAP1" species:7227 "Droso... 767 1.0e-92 2
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 877 4.0e-90 2
UNIPROTKB|Q5TG40 - symbol:DMAP1 "DNA methyltransferase 1-... 837 1.5e-83 1
UNIPROTKB|E1C4L9 - symbol:DMAP1 "Uncharacterized protein"... 826 2.2e-82 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 753 1.5e-76 2
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 741 1.5e-75 2
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 749 3.1e-74 1
UNIPROTKB|Q5TG39 - symbol:DMAP1 "DNA methyltransferase 1-... 649 1.2e-73 2
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 736 7.5e-73 1
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 735 1.6e-72 1
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 736 1.8e-72 1
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 735 1.9e-72 1
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 736 1.9e-72 1
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 732 2.0e-72 1
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 735 2.1e-72 1
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 735 2.4e-72 1
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 729 4.1e-72 1
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 732 5.0e-72 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 725 2.8e-71 1
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 721 2.9e-71 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 720 3.7e-71 1
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 719 4.8e-71 1
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 700 6.0e-71 2
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 717 7.7e-71 1
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 709 9.2e-71 2
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 709 9.5e-71 2
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 707 1.2e-70 2
UNIPROTKB|Q5TG38 - symbol:DMAP1 "DNA methyltransferase 1-... 714 1.6e-70 1
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 707 1.7e-70 2
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 706 2.4e-70 2
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 711 3.3e-70 1
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 711 3.3e-70 1
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 711 3.3e-70 1
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 703 5.1e-70 2
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 708 7.0e-70 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 708 7.0e-70 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 707 8.9e-70 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 709 1.8e-69 1
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 693 5.8e-68 1
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 678 7.8e-68 2
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 685 4.9e-67 1
UNIPROTKB|I3LNQ2 - symbol:DMAP1 "Uncharacterized protein"... 649 1.2e-63 1
WB|WBGene00013676 - symbol:ekl-4 species:6239 "Caenorhabd... 541 3.5e-52 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 546 7.8e-51 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 508 1.0e-47 2
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 504 7.4e-47 2
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 499 4.8e-46 2
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 499 5.1e-46 2
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 490 5.3e-45 2
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 484 1.8e-44 2
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 472 2.0e-44 2
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 478 2.2e-43 1
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 475 2.8e-43 2
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 466 8.8e-43 2
UNIPROTKB|Q5TG37 - symbol:DMAP1 "DNA methyltransferase 1-... 455 1.9e-42 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 447 1.5e-41 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 459 1.0e-40 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 434 3.9e-40 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 453 4.6e-40 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 452 1.4e-39 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 452 1.4e-39 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 452 1.4e-39 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 434 2.6e-39 2
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 431 9.2e-38 2
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 429 1.4e-37 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 427 2.9e-37 1
TAIR|locus:2065150 - symbol:AT2G47210 species:3702 "Arabi... 361 4.1e-37 2
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 427 5.8e-37 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 427 5.8e-37 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 417 6.8e-37 2
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 403 2.5e-35 2
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 403 2.5e-35 2
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 405 2.7e-35 2
POMBASE|SPAC9G1.13c - symbol:swc4 "Swr1 complex subunit S... 347 8.4e-34 2
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 389 2.7e-33 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 375 2.2e-31 1
UNIPROTKB|Q5TG36 - symbol:DMAP1 "DNA methyltransferase 1-... 266 3.2e-31 2
UNIPROTKB|G3MZV1 - symbol:G3MZV1 "Uncharacterized protein... 332 4.5e-29 1
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 336 5.4e-28 2
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 303 6.0e-26 1
UNIPROTKB|F1MWS5 - symbol:HDAC9 "Uncharacterized protein"... 312 3.1e-24 1
UNIPROTKB|I3L961 - symbol:I3L961 "Uncharacterized protein... 297 3.3e-24 3
UNIPROTKB|I3LKB5 - symbol:I3LKB5 "Uncharacterized protein... 305 1.6e-23 2
UNIPROTKB|H0YHJ5 - symbol:HDAC7 "Histone deacetylase 7" s... 280 1.8e-23 1
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 267 9.0e-22 1
SGD|S000003234 - symbol:SWC4 "Component of the Swr1p comp... 187 2.8e-21 3
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 255 8.7e-21 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 265 1.3e-20 1
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 246 8.1e-20 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 247 5.3e-19 2
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 247 5.3e-19 2
DICTYBASE|DDB_G0288747 - symbol:DDB_G0288747 "myb domain-... 251 1.5e-18 2
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 250 2.5e-18 1
WARNING: Descriptions of 99 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q1LZ99 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1 associated protein 1"
species:9913 "Bos taurus" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 GO:GO:0005634
GO:GO:0045892 GO:GO:0003682 GO:GO:0008168 CTD:55929
eggNOG:NOG298520 HOVERGEN:HBG051364 KO:K11324 OMA:QMLRHRY
OrthoDB:EOG4J3WH4 PANTHER:PTHR12855 GeneTree:ENSGT00390000016466
HOGENOM:HOG000007018 EMBL:DAAA02009030 EMBL:DAAA02009031
EMBL:BC116128 IPI:IPI00692114 RefSeq:NP_001068814.1
UniGene:Bt.28753 STRING:Q1LZ99 Ensembl:ENSBTAT00000007766
GeneID:508127 KEGG:bta:508127 InParanoid:Q1LZ99 NextBio:20868363
Uniprot:Q1LZ99
Length = 468
Score = 837 (299.7 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 163/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 307 (113.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
Score = 169 (64.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELKQA N ++ELQ L+H++EA+
Sbjct: 343 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEAL 398
>UNIPROTKB|E2R9T9 [details] [associations]
symbol:DMAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0042993 "positive regulation of transcription factor import
into nucleus" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0035267
GO:GO:0043968 GO:GO:0043967 GO:GO:0005657 GO:GO:0042993 CTD:55929
KO:K11324 OMA:QMLRHRY PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 EMBL:AAEX03009798 RefSeq:XP_532609.3
Ensembl:ENSCAFT00000007758 GeneID:475385 KEGG:cfa:475385
NextBio:20851233 Uniprot:E2R9T9
Length = 468
Score = 837 (299.7 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 163/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 307 (113.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
Score = 169 (64.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELKQA N ++ELQ L+H++EA+
Sbjct: 343 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEAL 398
>UNIPROTKB|Q9NPF5 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0040008 "regulation of growth"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=TAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0043968 "histone H2A acetylation"
evidence=IDA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IDA] [GO:0042993 "positive
regulation of transcription factor import into nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001005 InterPro:IPR008468
InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828 SMART:SM00717
GO:GO:0005737 GO:GO:0003714 EMBL:CH471059 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0040008 PROSITE:PS51293 GO:GO:0006306
GO:GO:0005657 GO:GO:0042993 GO:GO:0001103 EMBL:AF265228
EMBL:AL137200 EMBL:AB037846 EMBL:AL136657 EMBL:AM393614
EMBL:AK021605 EMBL:AK289366 EMBL:AL035417 EMBL:BC002855
EMBL:BC008053 EMBL:BX537895 IPI:IPI00219919 RefSeq:NP_001029195.1
RefSeq:NP_001029196.1 RefSeq:NP_061973.1 UniGene:Hs.8008 PDB:3HM5
PDB:4IEJ PDBsum:3HM5 PDBsum:4IEJ ProteinModelPortal:Q9NPF5
SMR:Q9NPF5 IntAct:Q9NPF5 STRING:Q9NPF5 PhosphoSite:Q9NPF5
DMDM:20138031 PaxDb:Q9NPF5 PRIDE:Q9NPF5 DNASU:55929
Ensembl:ENST00000315913 Ensembl:ENST00000361745
Ensembl:ENST00000372289 GeneID:55929 KEGG:hsa:55929 UCSC:uc001clq.1
CTD:55929 GeneCards:GC01P044680 HGNC:HGNC:18291 HPA:CAB033018
MIM:605077 neXtProt:NX_Q9NPF5 PharmGKB:PA134927315 eggNOG:NOG298520
HOVERGEN:HBG051364 InParanoid:Q9NPF5 KO:K11324 OMA:QMLRHRY
OrthoDB:EOG4J3WH4 EvolutionaryTrace:Q9NPF5 GenomeRNAi:55929
NextBio:61337 ArrayExpress:Q9NPF5 Bgee:Q9NPF5 CleanEx:HS_DMAP1
Genevestigator:Q9NPF5 GermOnline:ENSG00000178028 PANTHER:PTHR12855
Uniprot:Q9NPF5
Length = 467
Score = 837 (299.7 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 163/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 307 (113.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
Score = 169 (64.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELKQA N ++ELQ L+H++EA+
Sbjct: 343 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEAL 398
>MGI|MGI:1913483 [details] [associations]
symbol:Dmap1 "DNA methyltransferase 1-associated protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISO]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0042993
"positive regulation of transcription factor import into nucleus"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 MGI:MGI:1913483
GO:GO:0005737 GO:GO:0003714 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0035267 GO:GO:0043968 GO:GO:0043967
GO:GO:0040008 PROSITE:PS51293 GO:GO:0005657 GO:GO:0042993
GO:GO:0001103 CTD:55929 eggNOG:NOG298520 HOVERGEN:HBG051364
KO:K11324 OMA:QMLRHRY OrthoDB:EOG4J3WH4 PANTHER:PTHR12855
EMBL:AF265229 EMBL:AF438610 EMBL:AK005270 EMBL:AK012055
EMBL:BC002321 EMBL:BC045160 IPI:IPI00228601 IPI:IPI00317722
RefSeq:NP_075667.1 UniGene:Mm.29142 ProteinModelPortal:Q9JI44
SMR:Q9JI44 IntAct:Q9JI44 STRING:Q9JI44 PhosphoSite:Q9JI44
PaxDb:Q9JI44 PRIDE:Q9JI44 Ensembl:ENSMUST00000102687 GeneID:66233
KEGG:mmu:66233 GeneTree:ENSGT00390000016466 HOGENOM:HOG000007018
InParanoid:Q9JI44 NextBio:321037 Bgee:Q9JI44 CleanEx:MM_DMAP1
Genevestigator:Q9JI44 GermOnline:ENSMUSG00000009640 Uniprot:Q9JI44
Length = 468
Score = 837 (299.7 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 163/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 307 (113.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
Score = 169 (64.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELKQA N ++ELQ L+H++EA+
Sbjct: 343 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEAL 398
>RGD|1311295 [details] [associations]
symbol:Dmap1 "DNA methyltransferase 1-associated protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005657
"replication fork" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0035267 "NuA4
histone acetyltransferase complex" evidence=IEA;ISO] [GO:0042993
"positive regulation of transcription factor import into nucleus"
evidence=IEA;ISO] [GO:0043967 "histone H4 acetylation"
evidence=IEA;ISO] [GO:0043968 "histone H2A acetylation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR001005
InterPro:IPR008468 InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828
SMART:SM00717 RGD:1311295 GO:GO:0005634 GO:GO:0045892 GO:GO:0003682
GO:GO:0008168 CTD:55929 eggNOG:NOG298520 HOVERGEN:HBG051364
KO:K11324 OrthoDB:EOG4J3WH4 PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 HOGENOM:HOG000007018 EMBL:CH474008
EMBL:BC092651 IPI:IPI00365223 RefSeq:NP_001015006.1
UniGene:Rn.22845 STRING:Q568Y6 Ensembl:ENSRNOT00000026336
GeneID:298447 KEGG:rno:298447 UCSC:RGD:1311295 InParanoid:Q568Y6
NextBio:643696 Genevestigator:Q568Y6 Uniprot:Q568Y6
Length = 468
Score = 834 (298.6 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 162/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD ++
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQYK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 304 (112.1 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 63/132 (47%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD ++ R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQYK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
Score = 169 (64.5 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELKQA N ++ELQ L+H++EA+
Sbjct: 343 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEAL 398
>ZFIN|ZDB-GENE-040426-748 [details] [associations]
symbol:dmap1 "DNA methyltransferase 1 associated
protein 1" species:7955 "Danio rerio" [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0043968 "histone H2A acetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 ZFIN:ZDB-GENE-040426-748
GO:GO:0005634 GO:GO:0045892 GO:GO:0003682 GO:GO:0060041
GO:GO:0008168 CTD:55929 HOVERGEN:HBG051364 KO:K11324
PANTHER:PTHR12855 EMBL:BC048054 IPI:IPI00494563 RefSeq:NP_956549.1
UniGene:Dr.77451 STRING:Q7ZUN3 PRIDE:Q7ZUN3 GeneID:393225
KEGG:dre:393225 NextBio:20814289 ArrayExpress:Q7ZUN3 Bgee:Q7ZUN3
Uniprot:Q7ZUN3
Length = 464
Score = 838 (300.0 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
Identities = 169/299 (56%), Positives = 212/299 (70%)
Query: 3 SDIRDILEL---ERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND- 58
+D+RDILEL + D+ I+++ II DK + + + KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELAGGDNDS-GPISKKDIINSDKKKAKKVTETLTFKRPEGMHREVYALLYSDK 63
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
NRDAPPLLP+D+ QGY+ KAKLG +KVRPWKW+PFSNPARKD A+FHHWRR +EGK+Y
Sbjct: 64 NRDAPPLLPSDTTQGYRTVKAKLGCKKVRPWKWMPFSNPARKDGAIFHHWRRAAEEGKDY 123
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDLC RFDLRFIVIHDRYD ++
Sbjct: 124 PFARFNKTVQVPVYSEQEYQMYLHDDGWTKAETDHLFDLCKRFDLRFIVIHDRYDHQQY- 182
Query: 179 TSRTIEDLKQRYYFVCHTLAKMR-GTECSGGNEPKL--FDAEHEKKRKEQLKRLFERTPE 235
R++EDLK+RYY +C L K+R GT G EPK+ FDA HE++RKEQL+RLF RTPE
Sbjct: 183 RKRSVEDLKERYYCICGKLTKVRAGT----GAEPKIYIFDAGHERRRKEQLERLFNRTPE 238
Query: 236 QVEEEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADM-----QADNRKTDKKMPPKRK 289
QV EE+ L+ EL QDLQKL+TAAD +A+ + T KK+P KR+
Sbjct: 239 QVAEEEYLVQELRKIETRKREREKKAQDLQKLITAADTTTEMRRAERKATKKKLPQKRE 297
Score = 327 (120.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 71/135 (52%), Positives = 87/135 (64%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDLC RFDLR
Sbjct: 112 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQMYLHDDGWTKAETDHLFDLCKRFDLR 169
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMR-GTECSGGNEPKL--FDAEHEKK 473
FIVIHDRYD ++ R++EDLK+RYY +C L K+R GT G EPK+ FDA HE++
Sbjct: 170 FIVIHDRYDHQQY-RKRSVEDLKERYYCICGKLTKVRAGT----GAEPKIYIFDAGHERR 224
Query: 474 RKEQLKRLFERTPEQ 488
RKEQL+RLF RTPEQ
Sbjct: 225 RKEQLERLFNRTPEQ 239
Score = 164 (62.8 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L + G LNP+PTEEIV +NELRSD+VL+YELKQA N ++E Q L+H+Y+A+
Sbjct: 342 QILTEQGVDLNPMPTEEIVQMFNELRSDLVLVYELKQAYGNCEYEQQMLRHRYDAL 397
>UNIPROTKB|F1LX38 [details] [associations]
symbol:F1LX38 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001005 InterPro:IPR008468
InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828 SMART:SM00717
GO:GO:0005634 GO:GO:0045892 GO:GO:0003682 PANTHER:PTHR12855
IPI:IPI00949083 Ensembl:ENSRNOT00000029030 Uniprot:F1LX38
Length = 453
Score = 798 (286.0 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 158/288 (54%), Positives = 202/288 (70%)
Query: 7 DILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDA 62
DILEL E AP+ I+++ II DK + +P++ KRPE M EV+ALL +D RDA
Sbjct: 1 DILELGGPEGGAPSGTISKKDIINPDKKKSKKPSETLTFKRPESMHWEVYALLYSDKRDA 60
Query: 63 PPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYPFAR 122
PPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+YPFAR
Sbjct: 61 PPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYPFAR 120
Query: 123 FNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRT 182
FNK V +P Y+ E L WT+AE DHLFDL RFDLRF+VIHDRYD ++ R+
Sbjct: 121 FNKTVQVPVYSKQEDQLYLHDGAWTKAEADHLFDLSRRFDLRFVVIHDRYDHQQYK-KRS 179
Query: 183 IEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEEQM 242
+EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV EE+
Sbjct: 180 VEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVAEEEY 238
Query: 243 LLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 239 LLQELRKIEARKNELEKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 285
Score = 287 (106.1 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 80/219 (36%), Positives = 111/219 (50%)
Query: 272 DMQADNRKTDKKMPPKRKLTHQIRPRSLDTSVKTTAFQTLIDLG-LNPIPTEE-IVTHYN 329
D+ ++K KK P LT + RP S+ V + D L P T + T
Sbjct: 21 DIINPDKKKSKK--PSETLTFK-RPESMHWEVYALLYSDKRDAPPLLPSDTGQGYRTVKA 77
Query: 330 ELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEY 389
+L S V ++ + + + H A G+ + P F T + E
Sbjct: 78 KLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY--PFARFNKTVQVPVYSKQED 135
Query: 390 LQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTL 449
L WT+AE DHLFDL RFDLRF+VIHDRYD ++ R++EDLK+RYY +C L
Sbjct: 136 QLYLHDGAWTKAEADHLFDLSRRFDLRFVVIHDRYDHQQYK-KRSVEDLKERYYHICAKL 194
Query: 450 AKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQ 488
A +R + P +FDA HE++RKEQL+RL+ RTPEQ
Sbjct: 195 ANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQ 232
Score = 164 (62.8 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 309 QTLIDLG--LNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAV 362
Q L++LG L+P PTEE+V +NELRSD+VLLYELK+A N ++ELQ L+H++EA+
Sbjct: 335 QMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKRACANCEYELQMLQHRHEAL 390
>FB|FBgn0034537 [details] [associations]
symbol:DMAP1 "DMAP1" species:7227 "Drosophila melanogaster"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0043968 "histone
H2A acetylation" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IDA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 EMBL:AE013599
GO:GO:0005634 GO:GO:0045892 GO:GO:0006911 GO:GO:0003682 CTD:55929
eggNOG:NOG298520 KO:K11324 OMA:QMLRHRY PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 EMBL:AY058649 RefSeq:NP_611503.1
UniGene:Dm.4136 SMR:Q7K3D8 IntAct:Q7K3D8 STRING:Q7K3D8
EnsemblMetazoa:FBtr0086232 GeneID:37339 KEGG:dme:Dmel_CG11132
UCSC:CG11132-RA FlyBase:FBgn0034537 InParanoid:Q7K3D8
OrthoDB:EOG4DBRW0 GenomeRNAi:37339 NextBio:803178 Uniprot:Q7K3D8
Length = 433
Score = 767 (275.1 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 161/318 (50%), Positives = 216/318 (67%)
Query: 1 MTSDIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNR 60
M++D+RDIL++ER E+TR++ + K R + K +RPEGM REVFALL D +
Sbjct: 1 MSADVRDILDMERANTPEVTRDSFLATKK-RNFERTK-TASRRPEGMHREVFALLYTDKK 58
Query: 61 DAPPLLPTDS----GQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGK 116
DAPPLLPTD+ G GYK TKA+LGM+KVR W+W PFSNPAR D+AVFHHW+RVTD
Sbjct: 59 DAPPLLPTDTALGIGAGYKETKARLGMKKVRKWEWAPFSNPARNDSAVFHHWKRVTDNST 118
Query: 117 EYPFARFNKQVSIPTYTDTEYLQELQSP--TWTRAETDHLFDLCHRFDLRFIVIHDRYDT 174
+YPFA+FNKQ+ +P+YT TEY L++ W++ +TDHLFDL RFDLRFIV+ DR++
Sbjct: 119 DYPFAKFNKQLEVPSYTMTEYNAHLRNNINNWSKVQTDHLFDLARRFDLRFIVMADRWNR 178
Query: 175 NKFPTSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLF--DAEHEKKRKEQLKRLFER 232
+ T +T+E+LK+RYY V LAK + +E K+F D EHE++RKEQL++LF+R
Sbjct: 179 QQHGT-KTVEELKERYYEVVALLAKAKNQT----SEKKVFVYDVEHERRRKEQLEKLFKR 233
Query: 233 TPEQVEEEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQ---ADN----RKTDKKMP 285
T +QVEEE ML+ E+ TQDLQKL++ AD Q A N RK +KK+
Sbjct: 234 TTQQVEEENMLINEMKKIEARKKERERKTQDLQKLISQADQQNEHASNTPSTRKYEKKLH 293
Query: 286 PKRKLTHQIRPRSLDTSV 303
K+K+ Q RP +D+ V
Sbjct: 294 -KKKVHQQPRPSRVDSVV 310
Score = 236 (88.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 387 TEYLQELQSP--TWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYF 444
TEY L++ W++ +TDHLFDL RFDLRFIV+ DR++ + T +T+E+LK+RYY
Sbjct: 137 TEYNAHLRNNINNWSKVQTDHLFDLARRFDLRFIVMADRWNRQQHGT-KTVEELKERYYE 195
Query: 445 VCYTLAKMRGTECSGGNEPKLF--DAEHEKKRKEQLKRLFERTPEQ 488
V LAK + +E K+F D EHE++RKEQL++LF+RT +Q
Sbjct: 196 VVALLAKAKNQT----SEKKVFVYDVEHERRRKEQLEKLFKRTTQQ 237
Score = 176 (67.0 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 318 PIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPGETFQIPEKIFE- 376
P PTE+I T +NELRSDMVLL EL+ AL +E++SLKHQYEA PG+T IP +
Sbjct: 364 PPPTEDICTSFNELRSDMVLLCELRTALSTCVYEMESLKHQYEAACPGKTLNIPPSLVPI 423
Query: 377 PTSLLSN 383
T L N
Sbjct: 424 KTEALDN 430
Score = 41 (19.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 309 QTLIDLGLNPIPTEEIVTHYNELRSDMVLLYELKQALDN 347
+T LG+ + E N R+D + + K+ DN
Sbjct: 78 ETKARLGMKKVRKWEWAPFSNPARNDSAVFHHWKRVTDN 116
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 877 (313.8 bits), Expect = 4.0e-90, Sum P(2) = 4.0e-90
Identities = 156/230 (67%), Positives = 189/230 (82%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY +LYLSIHRHDDGNFFPGTGGP ECG+GAGLGFN+NI+WSGAL
Sbjct: 1008 WDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGTGGPTECGSGAGLGFNVNISWSGAL 1067
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
NPP+GDAEY+AAFRT+VMP+A+ F+P IVLVS+GFDAA GHP PLGGY +SPACFG+MT+
Sbjct: 1068 NPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGGYHVSPACFGFMTR 1127
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
+L+ LA+GKVVLALEGGYDL ++CDSA+ CVRALLGD P+++ EL R PC A+ TLQ
Sbjct: 1128 ELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAELERPPCQNAINTLQ 1187
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKH 758
KTIAIQ +HWP ++ HT+ SAL +++ET++AMA LSM H
Sbjct: 1188 KTIAIQQTHWPCVRMLEHTVGLSALETLKVEHDESETINAMAGLSMQSMH 1237
Score = 159 (61.0 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 25/34 (73%), Positives = 33/34 (97%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P +CG+GAGLGFN+NI+WSGALNPP+GDAEY+++
Sbjct: 1046 PTECGSGAGLGFNVNISWSGALNPPLGDAEYIAA 1079
Score = 47 (21.6 bits), Expect = 4.0e-90, Sum P(2) = 4.0e-90
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 280 TDKKMPPKRKLTHQI 294
TDKK PPK LT I
Sbjct: 661 TDKKKPPKTVLTSTI 675
>UNIPROTKB|Q5TG40 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR008468
InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828 SMART:SM00717
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0008168 GO:GO:0005657 EMBL:AL035417 UniGene:Hs.8008
HGNC:HGNC:18291 HOVERGEN:HBG051364 PANTHER:PTHR12855
HOGENOM:HOG000007018 IPI:IPI00643843 SMR:Q5TG40 STRING:Q5TG40
Ensembl:ENST00000446292 Uniprot:Q5TG40
Length = 302
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 163/292 (55%), Positives = 210/292 (71%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVE 238
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVA 242
Query: 239 EEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
EE+ LL EL +QDLQKL+TAAD A+ R+T++K P K+KL
Sbjct: 243 EEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAP-KKKL 293
Score = 307 (113.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 229 QLERLYNRTPEQ 240
>UNIPROTKB|E1C4L9 [details] [associations]
symbol:DMAP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0042993 "positive
regulation of transcription factor import into nucleus"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0043968 "histone H2A acetylation" evidence=IEA]
InterPro:IPR001005 InterPro:IPR008468 InterPro:IPR027109
Pfam:PF05499 ProDom:PD492828 SMART:SM00717 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0035267
GO:GO:0043968 GO:GO:0043967 GO:GO:0005657 GO:GO:0042993 OMA:QMLRHRY
PANTHER:PTHR12855 GeneTree:ENSGT00390000016466 EMBL:AADN02012708
IPI:IPI00571181 Ensembl:ENSGALT00000016432 Uniprot:E1C4L9
Length = 331
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 158/291 (54%), Positives = 205/291 (70%)
Query: 3 SDIRDILEL---ERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDN 59
+D+RDILEL E + I ++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGVESENTGTINKKDIINSDKKKSKKSSETLTFKRPEGMHREVYALLYSDK 64
Query: 60 RDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYP 119
+DAPPLLP+D+ QGY+ KAKLG +KVRPWKW+PF+NPARKD A+F+HWRR +EGK+YP
Sbjct: 65 KDAPPLLPSDTTQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFYHWRRAAEEGKDYP 124
Query: 120 FARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPT 179
FARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 FARFNKTVQVPVYSEQEYQMYLHDDAWTKAETDHLFDLARRFDLRFVVIHDRYDHQQFK- 183
Query: 180 SRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEE 239
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV E
Sbjct: 184 KRSVEDLKERYYHICAKLANIRAAPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVAE 242
Query: 240 EQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKL 290
E+ L+ EL TQDLQKL+TAAD + R+ ++K P K+KL
Sbjct: 243 EEYLIQELRKIETRKKEREKRTQDLQKLITAADTTTEQRRAERKAP-KKKL 292
Score = 310 (114.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 112 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQMYLHDDAWTKAETDHLFDLARRFDLR 169
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 170 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANIRAAPGTDLKIP-VFDAGHERRRKE 227
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 228 QLERLYNRTPEQ 239
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 753 (270.1 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 142/229 (62%), Positives = 178/229 (77%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FYSD RVLY+S+HR+DDGNFFPG+G P E GTGAG+GFN+N+A++G L
Sbjct: 839 WDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL 898
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 899 DPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 958
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 959 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 1018
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T +S + A E+ ETV+AMASLS+ K
Sbjct: 1019 KVIEIHSQYWRSLQRLASTAGYSLVEAQKCENEEAETVTAMASLSVAVK 1067
Score = 136 (52.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/34 (64%), Positives = 32/34 (94%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTGAG+GFN+N+A++G L+PPMGDAEYL++
Sbjct: 877 PDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAA 910
Score = 42 (19.8 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 216 AEHEKKRKEQLKRLFE-RTPEQVEEEQMLLA 245
AE +++ EQL R E + E ++++Q LLA
Sbjct: 91 AEFQRQH-EQLSRQHEAQLHEHIKQQQELLA 120
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 741 (265.9 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 139/229 (60%), Positives = 177/229 (77%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FYSD VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 807 WDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 866
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 867 DPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 926
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P +V +++
Sbjct: 927 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPYDNSVRSME 986
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T+ +S + A E+ ETV+AMASLS+ K
Sbjct: 987 KVIDIHSQYWRSLQRLASTVGYSLVEAQKCENEEAETVTAMASLSVGVK 1035
Score = 131 (51.2 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTG G+GFN+N+A++G L+PPMGDAEYL++
Sbjct: 845 PDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAA 878
Score = 42 (19.8 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 216 AEHEKKRKEQLKRLFE-RTPEQVEEEQMLLA 245
AE +++ EQL R E + E ++++Q LLA
Sbjct: 61 AEFQRQH-EQLSRQHEAQLHEHIKQQQELLA 90
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 135/231 (58%), Positives = 179/231 (77%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FYSD VLYLS+HR+DDGNFFPG+G P E G G G+GFN+N+A++G L
Sbjct: 778 WDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGL 837
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
PPMGDA+YLAAF ++VMP+A EF P +VLVS+GFDA GHPPPLGGYKL+ CFGY+T+
Sbjct: 838 EPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFGYLTK 897
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ P+ ++ L + P A+++++
Sbjct: 898 QLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAIQSME 957
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKHL 759
K + +Q +W L+RS T+ +S A E+ ETV+AMASLS+ KH+
Sbjct: 958 KVLEVQSKYWRSLQRSVSTLGYSLREAQRCENEEAETVTAMASLSVANKHM 1008
>UNIPROTKB|Q5TG39 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0043968 "histone H2A acetylation"
evidence=IEA] InterPro:IPR001005 InterPro:IPR027109 SMART:SM00717
GO:GO:0003682 GO:GO:0008168 EMBL:AL035417 UniGene:Hs.8008
HGNC:HGNC:18291 HOVERGEN:HBG051364 PANTHER:PTHR12855
HOGENOM:HOG000007018 IPI:IPI00514540 SMR:Q5TG39 STRING:Q5TG39
Ensembl:ENST00000437511 Uniprot:Q5TG39
Length = 285
Score = 649 (233.5 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 117/187 (62%), Positives = 144/187 (77%)
Query: 61 DAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYPF 120
DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+YPF
Sbjct: 93 DAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYPF 152
Query: 121 ARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTS 180
ARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 153 ARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK-K 211
Query: 181 RTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEE 240
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RTPEQV EE
Sbjct: 212 RSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRTPEQVAEE 270
Query: 241 QMLLAEL 247
+ LL EL
Sbjct: 271 EYLLQEL 277
Score = 307 (113.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 64/132 (48%), Positives = 82/132 (62%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 139 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 196
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 197 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 254
Query: 477 QLKRLFERTPEQ 488
QL+RL+ RTPEQ
Sbjct: 255 QLERLYNRTPEQ 266
Score = 113 (44.8 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLL 66
LL
Sbjct: 65 KNKGSCLL 72
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FYSD VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 423 WDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 482
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 483 DPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTK 542
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 543 QLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 602
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K + I +W L+R+ T S + A E+ ETV+AMASLS+ K
Sbjct: 603 KVMEIHSKYWRCLQRTTSTAGRSLIEAQTCENEEAETVTAMASLSVGVK 651
Score = 131 (51.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTG G+GFN+N+A++G L+PPMGDAEYL++
Sbjct: 461 PDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAA 494
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 735 (263.8 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTGAG+GFN+N+A++G L
Sbjct: 809 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL 868
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYL AFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 869 DPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 928
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + AV +++
Sbjct: 929 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 988
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T+ +S + A E+ ETV+AMASLS+ K
Sbjct: 989 KVIEIHSKYWHSLQRYASTVGYSLVEAQKCENEEAETVTAMASLSVGVK 1037
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTGAG+GFN+N+A++G L+PPMGD EYL++
Sbjct: 847 PDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTA 880
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 736 (264.1 bits), Expect = 1.8e-72, P = 1.8e-72
Identities = 136/229 (59%), Positives = 176/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 832 WDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 891
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 892 DPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 951
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 952 QLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSME 1011
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K + I +W L+R + T+ S + A E+ ETV+AMASLS+ K
Sbjct: 1012 KVMGIHSEYWRCLQRLSPTVGHSLIEAQKCENEEAETVTAMASLSVGVK 1060
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTG G+GFN+N+A++G L+PPMGDAEYL++
Sbjct: 870 PDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAA 903
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 735 (263.8 bits), Expect = 1.9e-72, P = 1.9e-72
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTGAG+GFN+N+A++G L
Sbjct: 817 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL 876
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYL AFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 877 DPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 936
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + AV +++
Sbjct: 937 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 996
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T+ +S + A E+ ETV+AMASLS+ K
Sbjct: 997 KVIEIHSKYWHSLQRYASTVGYSLVEAQKCENEEAETVTAMASLSVGVK 1045
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTGAG+GFN+N+A++G L+PPMGD EYL++
Sbjct: 855 PDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTA 888
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 736 (264.1 bits), Expect = 1.9e-72, P = 1.9e-72
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FYSD VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 839 WDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 898
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 899 DPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTK 958
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 959 QLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 1018
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K + I +W L+R+ T S + A E+ ETV+AMASLS+ K
Sbjct: 1019 KVMEIHSKYWRCLQRTTSTAGRSLIEAQTCENEEAETVTAMASLSVGVK 1067
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTG G+GFN+N+A++G L+PPMGDAEYL++
Sbjct: 877 PDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAA 910
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 136/226 (60%), Positives = 171/226 (75%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E G G+G GFN+N+AW+G L
Sbjct: 742 WDVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGL 801
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHPPPLGGY +S CFGYMTQ
Sbjct: 802 DPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQ 861
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM+LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 862 QLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLE 921
Query: 713 KTIAIQVSHWPVLKRSA-HTITWSAL---SAAEDNETVSAMASLSM 754
I + +W ++R A +W + AE+ E V+A+ASLS+
Sbjct: 922 AVIRVHSEYWGCMQRLASRPDSWVHRVPGADAEEVEAVTALASLSV 967
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 735 (263.8 bits), Expect = 2.1e-72, P = 2.1e-72
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTGAG+GFN+N+A++G L
Sbjct: 826 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL 885
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYL AFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 886 DPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 945
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + AV +++
Sbjct: 946 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 1005
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T+ +S + A E+ ETV+AMASLS+ K
Sbjct: 1006 KVIEIHSKYWHSLQRYASTVGYSLVEAQKCENEEAETVTAMASLSVGVK 1054
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTGAG+GFN+N+A++G L+PPMGD EYL++
Sbjct: 864 PDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTA 897
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 735 (263.8 bits), Expect = 2.4e-72, P = 2.4e-72
Identities = 137/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTGAG+GFN+N+A++G L
Sbjct: 835 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL 894
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYL AFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 895 DPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 954
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G+VVLALEGG+DL ++CD++EACV ALLG+ PL ++ L + AV +++
Sbjct: 955 QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 1014
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K I I +W L+R A T+ +S + A E+ ETV+AMASLS+ K
Sbjct: 1015 KVIEIHSKYWHSLQRYASTVGYSLVEAQKCENEEAETVTAMASLSVGVK 1063
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTGAG+GFN+N+A++G L+PPMGD EYL++
Sbjct: 873 PDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTA 906
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 136/225 (60%), Positives = 169/225 (75%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D RVLY+S+HRHDDGNFFPG+G E GTG+G GFN+N+AW+G L
Sbjct: 687 WDVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGL 746
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQ
Sbjct: 747 DPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQ 806
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM+LA G VVLALEGG+DL ++CD++EACV ALLG+ PLSQE + P L A+ +L+
Sbjct: 807 QLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQKPNLNAIRSLE 866
Query: 713 KTIAIQVSHWPVLKRSAHTIT-W--SALSAAEDNETVSAMASLSM 754
+ + +W ++R A W A + E V+A+ASLS+
Sbjct: 867 AVVRVHRKYWGCMQRLASCPDPWLPRVPGADAEVEAVTALASLSV 911
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 732 (262.7 bits), Expect = 5.0e-72, P = 5.0e-72
Identities = 136/229 (59%), Positives = 175/229 (76%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 831 WDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 890
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 891 EPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 950
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 951 QLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSME 1010
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKK 757
K + I +W L+R + T+ S + A E+ ETV+AMASLS+ K
Sbjct: 1011 KVMDIHSKYWRCLQRLSSTVGHSLIEAQKCEKEEAETVTAMASLSVGVK 1059
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P++ GTG G+GFN+N+A++G L PPMGDAEYL++
Sbjct: 869 PDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAA 902
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 725 (260.3 bits), Expect = 2.8e-71, P = 2.8e-71
Identities = 135/224 (60%), Positives = 174/224 (77%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E GTG G G+NINIAW+G L+
Sbjct: 822 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 881
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
PPMGD EYL AFRT+V PVAKEFDP +VLVSAGFDA GH PPLGGYK++ CFG++T+Q
Sbjct: 882 PPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQ 941
Query: 654 LMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQK 713
LMTLADG VVLALEGG+DL ++CD++EACV ALLG+ PL+++ L ++P + AV +LQK
Sbjct: 942 LMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVISLQK 1001
Query: 714 TIAIQVSHWPVLKRSA--HTITWSALSAAEDNETVSAMASLSMN 755
I IQ +W ++ A + E+ ETVSA+ASL+++
Sbjct: 1002 IIEIQSKYWKSVRMVAVPRGCALAGTQLQEETETVSALASLTVD 1045
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + GTG G G+NINIAW+G L+PPMGD EYL +
Sbjct: 859 PNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEA 892
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 134/225 (59%), Positives = 168/225 (74%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E GTG+G GFN+N+AW+G L
Sbjct: 693 WDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGL 752
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQ
Sbjct: 753 DPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQ 812
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 813 QLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQKPNLSAIRSLE 872
Query: 713 KTIAIQVSHWPVLKRSAHTI-TW--SALSAAEDNETVSAMASLSM 754
+ + +W ++R A +W A + E V+A+ASLS+
Sbjct: 873 AVVRVHRKYWGCMQRLASCPDSWLPRVPGADAEVEAVTALASLSV 917
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 135/226 (59%), Positives = 170/226 (75%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E G G+G GFN+N+AW+G L
Sbjct: 705 WDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGL 764
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQ
Sbjct: 765 DPPMGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQ 824
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM+LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 825 QLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLE 884
Query: 713 KTIAIQVSHWPVLKRSAHTI-TW-SALSAA--EDNETVSAMASLSM 754
I + +W ++R A +W + A E+ E V+A+ASLS+
Sbjct: 885 AVIRVHSKYWGCMQRLASCPDSWVPRVPGADTEEVEAVTALASLSV 930
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 135/226 (59%), Positives = 169/226 (74%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E G G+G GFN+N+AW+G L
Sbjct: 706 WDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGL 765
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQ
Sbjct: 766 DPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQ 825
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 826 QLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLE 885
Query: 713 KTIAIQVSHWPVLKRSAHTI-TW-SALSAA--EDNETVSAMASLSM 754
I + +W ++R A +W + A E+ E V+A+ASLS+
Sbjct: 886 AVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSV 931
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 700 (251.5 bits), Expect = 6.0e-71, Sum P(2) = 6.0e-71
Identities = 130/232 (56%), Positives = 169/232 (72%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW G +
Sbjct: 869 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGV 928
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 929 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 988
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 989 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1048
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW +++ A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1049 KVIEIQSKHWSCVQKFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 1100
Score = 50 (22.7 bits), Expect = 6.0e-71, Sum P(2) = 6.0e-71
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 131 TYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLR------FIVIHDRYDTNKFPTS 180
T+ E+ +QS TW+R + L C R R +H Y T + TS
Sbjct: 701 THVHPEHAGRIQS-TWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTS 755
Score = 45 (20.9 bits), Expect = 2.0e-70, Sum P(2) = 2.0e-70
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 388 EYLQELQSPTWTRAETDHLFDLCHRFDLR------FIVIHDRYDTNKFPTS 432
E+ +QS TW+R + L C R R +H Y T + TS
Sbjct: 706 EHAGRIQS-TWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTS 755
Score = 38 (18.4 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 212 KCWGAHHAS 220
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 136/226 (60%), Positives = 169/226 (74%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQIFY D VLY+S+HRHDDGNFFPG+G E G G G GFN+NIAW+G L
Sbjct: 705 WDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNIAWTGGL 764
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFRT+VMP+A EF P +VLVSAGFDAA GHPPPLGGYK+S CFGYMT+
Sbjct: 765 DPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTK 824
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM+LA G +VLALEGG+DL ++CD++EA L PL +E + + P AV +L+
Sbjct: 825 QLMSLAGGAIVLALEGGHDLTAICDASEAYPSHLSPWQLDPLPEESMRQKPNANAVRSLE 884
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSM 754
I +Q +W ++R A ++ S L A AE+ ETV+A+ASLS+
Sbjct: 885 AVIQVQSKYWVAVQRFASKLSCSFLEAQHHEAEEVETVTALASLSV 930
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 709 (254.6 bits), Expect = 9.2e-71, Sum P(2) = 9.2e-71
Identities = 131/232 (56%), Positives = 169/232 (72%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 858 WDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGV 917
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 918 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 977
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 978 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 1037
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1038 KVIEIQSKHWSCVQRFATGLGCSLQEAQAGETEEAETVSAMALLSVGAEQAQ 1089
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00055
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 896 PEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTA 929
Score = 38 (18.4 bits), Expect = 9.2e-71, Sum P(2) = 9.2e-71
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 203 KCWGAHHAS 211
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 709 (254.6 bits), Expect = 9.5e-71, Sum P(2) = 9.5e-71
Identities = 131/232 (56%), Positives = 171/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 860 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 919
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A+EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 920 DPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 979
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 980 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLE 1039
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1040 KVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQ 1091
Score = 125 (49.1 bits), Expect = 0.00070, P = 0.00070
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 898 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 931
Score = 38 (18.4 bits), Expect = 9.5e-71, Sum P(2) = 9.5e-71
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 203 KCWGAHHAS 211
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 707 (253.9 bits), Expect = 1.2e-70, Sum P(2) = 1.2e-70
Identities = 131/232 (56%), Positives = 170/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 837 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGV 896
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 897 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 956
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 957 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1016
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1017 KVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 1068
Score = 126 (49.4 bits), Expect = 0.00053, P = 0.00053
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 875 PEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTA 908
Score = 38 (18.4 bits), Expect = 1.2e-70, Sum P(2) = 1.2e-70
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 177 KCWGAHHAS 185
>UNIPROTKB|Q5TG38 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0043968 "histone H2A acetylation"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR027109 SMART:SM00717
GO:GO:0003714 GO:GO:0045892 GO:GO:0003682 GO:GO:0008168
GO:GO:0005657 EMBL:AL035417 UniGene:Hs.8008 HGNC:HGNC:18291
HOVERGEN:HBG051364 PANTHER:PTHR12855 HOGENOM:HOG000007018
IPI:IPI00644235 SMR:Q5TG38 STRING:Q5TG38 Ensembl:ENST00000440641
Uniprot:Q5TG38
Length = 237
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 135/235 (57%), Positives = 174/235 (74%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERT 233
R++EDLK+RYY +C LA +R + P +FDA HE++RKEQL+RL+ RT
Sbjct: 185 -KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKEQLERLYNRT 237
Score = 290 (107.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/129 (47%), Positives = 79/129 (61%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F+VIHDRYD +F R++EDLK+RYY +C LA +R + P +FDA HE++RKE
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHICAKLANVRAVPGTDLKIP-VFDAGHERRRKE 228
Query: 477 QLKRLFERT 485
QL+RL+ RT
Sbjct: 229 QLERLYNRT 237
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 707 (253.9 bits), Expect = 1.7e-70, Sum P(2) = 1.7e-70
Identities = 131/232 (56%), Positives = 170/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 864 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGV 923
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 924 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 983
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 984 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1043
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1044 KVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 1095
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00055
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 902 PEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTA 935
Score = 38 (18.4 bits), Expect = 1.7e-70, Sum P(2) = 1.7e-70
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 204 KCWGAHHAS 212
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 706 (253.6 bits), Expect = 2.4e-70, Sum P(2) = 2.4e-70
Identities = 131/232 (56%), Positives = 170/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 872 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 931
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 932 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 991
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 992 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1051
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1052 KVIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 1103
Score = 125 (49.1 bits), Expect = 0.00071, P = 0.00071
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 910 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 943
Score = 38 (18.4 bits), Expect = 2.4e-70, Sum P(2) = 2.4e-70
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 212 KCWGTHHAS 220
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 132/232 (56%), Positives = 169/232 (72%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 655 WDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 714
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 715 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 774
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 775 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 834
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LSM + Q
Sbjct: 835 KVIEIQSKHWSCVQRFATGLGCSLREAQTGEKEEAETVSAMALLSMGAEQAQ 886
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 693 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 726
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 132/232 (56%), Positives = 169/232 (72%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 573 WDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 632
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 633 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 692
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 693 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 752
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LSM + Q
Sbjct: 753 KVIEIQSKHWSCVQRFATGLGCSLREAQTGEKEEAETVSAMALLSMGAEQAQ 804
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 611 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 644
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 132/232 (56%), Positives = 169/232 (72%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 655 WDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 714
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 715 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 774
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 775 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 834
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LSM + Q
Sbjct: 835 KVIEIQSKHWSCVQRFATGLGCSLREAQTGEKEEAETVSAMALLSMGAEQAQ 886
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 693 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 726
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 703 (252.5 bits), Expect = 5.1e-70, Sum P(2) = 5.1e-70
Identities = 130/232 (56%), Positives = 170/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 869 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 928
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 929 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 988
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 989 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1048
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW +++ A + S A E+ ETVSAMA LS+ + Q
Sbjct: 1049 KVIEIQSKHWSCVQKFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 1100
Score = 125 (49.1 bits), Expect = 0.00071, P = 0.00071
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 907 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 940
Score = 38 (18.4 bits), Expect = 5.1e-70, Sum P(2) = 5.1e-70
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 531 RCWDVHHGN 539
+CW HH +
Sbjct: 212 KCWGAHHAS 220
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 134/225 (59%), Positives = 168/225 (74%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E G G+G GFN+N+AW+G L+
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQQ
Sbjct: 199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQ 258
Query: 654 LMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQK 713
LM LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 259 LMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEA 318
Query: 714 TIAIQVSHWPVLKRSAHTI-TW-SALSAA--EDNETVSAMASLSM 754
I + +W ++R A +W + A E+ E V+A+ASLS+
Sbjct: 319 VIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSV 363
Score = 124 (48.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 487 EQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
++ G G+G GFN+N+AW+G L+PPMGD EYL++
Sbjct: 177 DEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAA 209
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 165 FIVIHDRYDTNKFPTSRTIEDL 186
+I +H D N FP S ++++
Sbjct: 158 YISLHRHDDGNFFPGSGAVDEV 179
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 417 FIVIHDRYDTNKFPTSRTIEDL 438
+I +H D N FP S ++++
Sbjct: 158 YISLHRHDDGNFFPGSGAVDEV 179
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 134/227 (59%), Positives = 174/227 (76%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E G G G G+N+NIAW+G L+
Sbjct: 248 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLD 307
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPAC--FGYMT 651
PPMGD EYL AFRT+VMPVA+EFDP +VLVSAGFDA GH PPLGGYK++ C FG++T
Sbjct: 308 PPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLT 367
Query: 652 QQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETL 711
+QLMTLA+G+V LALEGG+DL ++CD++EAC+ ALLG+ P L ++ L +S A +L
Sbjct: 368 KQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAASL 427
Query: 712 QKTIAIQVSHWPVLKRSAHTITWSALSAA---EDNETVSAMASLSMN 755
QKTI IQ +W +K A AL A+ E+ ETVSA+ASL+++
Sbjct: 428 QKTIEIQSKYWKSIKMVA-VARGCALPASQLQEETETVSALASLTVD 473
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + G G G G+N+NIAW+G L+PPMGD EYL +
Sbjct: 285 PNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEA 318
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 131/232 (56%), Positives = 170/232 (73%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WD+HHGNGTQQ FY+D VLY+S+HR+D+GNFFPG+G P E G G G+G+N+N+AW+G +
Sbjct: 409 WDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV 468
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PP+GD EYL AFRT+VMP+A EF P +VLVSAGFDA GH PLGGY ++ CFG++T+
Sbjct: 469 DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTR 528
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLMTLA G+VVLALEGG+DL ++CD++EACV ALL PL + L + P + AV TL+
Sbjct: 529 QLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 588
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALSA----AEDNETVSAMASLSMNKKHLQ 760
K I IQ HW ++R A + S A E+ ETVSAMA LS+ + Q
Sbjct: 589 KVIGIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQ 640
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
PE+ G G G+G+N+N+AW+G ++PP+GD EYL++
Sbjct: 447 PEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 480
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 709 (254.6 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 129/226 (57%), Positives = 174/226 (76%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E G+G G GFNINIAW+G L+
Sbjct: 821 DVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGFNINIAWTGGLD 880
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
PPMGD EYL AFRT++MP A EFDP+IVLVSAGFDA GH PPLGGYK++ CFG++T+Q
Sbjct: 881 PPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQ 940
Query: 654 LMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQK 713
L+ LADG+VVLALEGG+DL ++CD++EAC+ ALLG+ PL ++ + + P + A+ +L+K
Sbjct: 941 LLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKK 1000
Query: 714 TIAIQVSHWPVLKRSAHTITWSALSAA----EDNETVSAMASLSMN 755
T IQ +W ++ + + + + E+ ETVSAMASLS++
Sbjct: 1001 TTEIQSKYWKSVEPYSVPVDCALAESQKREREETETVSAMASLSVD 1046
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + G+G G GFNINIAW+G L+PPMGD EYL++
Sbjct: 858 PNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTA 891
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 693 (249.0 bits), Expect = 5.8e-68, P = 5.8e-68
Identities = 126/185 (68%), Positives = 155/185 (83%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E GTG G G+NINIAW+G L+
Sbjct: 820 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 879
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
PPMGD EYL AFRTIV PVAKEFDP +VLVSAGFDA GH PPLGGYK++ CFG++T+Q
Sbjct: 880 PPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQ 939
Query: 654 LMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQK 713
LMTLADG+VVLALEGG+DL ++CD++EACV ALLG+ PL+++ L +SP + AV +LQK
Sbjct: 940 LMTLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQSPNMNAVISLQK 999
Query: 714 TIAIQ 718
I IQ
Sbjct: 1000 IIEIQ 1004
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + GTG G G+NINIAW+G L+PPMGD EYL +
Sbjct: 857 PNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEA 890
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 678 (243.7 bits), Expect = 7.8e-68, Sum P(2) = 7.8e-68
Identities = 120/185 (64%), Positives = 151/185 (81%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY+D VLY+S+HR+DDGNFFPG+G P E GTG G+GFN+N+A++G L
Sbjct: 838 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGL 897
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGDAEYLAAFRT+VMP+A EF P +VLVS+GFDA GHP PLGGY LS CFGY+T+
Sbjct: 898 DPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK 957
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G++VLALEGG+DL ++CD++EACV ALLG+ PL ++ L + P AV +++
Sbjct: 958 QLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 1017
Query: 713 KTIAI 717
K I I
Sbjct: 1018 KVIEI 1022
Score = 42 (19.8 bits), Expect = 7.8e-68, Sum P(2) = 7.8e-68
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 216 AEHEKKRKEQLKRLFE-RTPEQVEEEQMLLA 245
AE +++ EQL R E + E ++++Q LLA
Sbjct: 91 AEFQRQH-EQLSRQHEAQLHEHIKQQQELLA 120
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 685 (246.2 bits), Expect = 4.9e-67, P = 4.9e-67
Identities = 122/187 (65%), Positives = 148/187 (79%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQQ FY D VLY+S+HRHDDGNFFPG+G E G G+G GFN+N+AW+G L
Sbjct: 762 WDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGL 821
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+PPMGD EYLAAFR +VMP+A+EF P +VLVSAGFDAA GHP PLGGY +S CFGYMTQ
Sbjct: 822 DPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQ 881
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
QLM LA G VVLALEGG+DL ++CD++EACV ALLG+ PLS+E + P L A+ +L+
Sbjct: 882 QLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLE 941
Query: 713 KTIAIQV 719
I + +
Sbjct: 942 AVIRVHM 948
>UNIPROTKB|I3LNQ2 [details] [associations]
symbol:DMAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0042993
"positive regulation of transcription factor import into nucleus"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR008468 InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828
SMART:SM00717 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0035267 GO:GO:0043968 GO:GO:0043967
GO:GO:0005657 GO:GO:0042993 OMA:QMLRHRY PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 Ensembl:ENSSSCT00000028893
Uniprot:I3LNQ2
Length = 332
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 147/338 (43%), Positives = 202/338 (59%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM R+V ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHRDVCALLYSD 64
Query: 59 NRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEY 118
+DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+Y
Sbjct: 65 KKDAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDY 124
Query: 119 PFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 178
PFARFNK V +P Y++ EY L WT+AETDHLFDL RFDLRF+VIHDRYD +F
Sbjct: 125 PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFK 184
Query: 179 TSRTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQ--LKRLFERTPEQ 236
R++EDLK+RYY H + R + +L++ E+ +E+ L+ L + +
Sbjct: 185 -KRSVEDLKERYY---HIXERRRKEQLE-----RLYNRTPEQVAEEEYLLQELRKIEARK 235
Query: 237 VEEEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKTDKKMPPKRKLTHQIR- 295
E E+ AE Q + A A + D K + +++
Sbjct: 236 KEREKDTTAE-QRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKL 294
Query: 296 PRSLDTSVKTTAFQTLIDLG--LNPIPTEEIVTHYNEL 331
P S+ Q L++LG L+P PTEE+V +NEL
Sbjct: 295 PSSVGQKKIKALEQMLLELGVELSPTPTEELVHMFNEL 332
Score = 204 (76.9 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 42/89 (47%), Positives = 53/89 (59%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H A G+ + P F T + + EY L WT+AETDHLFDL RFDLR
Sbjct: 113 HWRRAAEEGKDY--PFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLR 170
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445
F+VIHDRYD +F R++EDLK+RYY +
Sbjct: 171 FVVIHDRYDHQQFK-KRSVEDLKERYYHI 198
Score = 73 (30.8 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 471 EKKRKEQLKRLFERTPEQ 488
E++RKEQL+RL+ RTPEQ
Sbjct: 200 ERRRKEQLERLYNRTPEQ 217
>WB|WBGene00013676 [details] [associations]
symbol:ekl-4 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001005 InterPro:IPR008468
InterPro:IPR027109 Pfam:PF05499 ProDom:PD492828 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0040010
GO:GO:0045892 GO:GO:0040011 GO:GO:0003682 GO:GO:0040035
GO:GO:0040027 eggNOG:NOG298520 KO:K11324 PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 HOGENOM:HOG000007018 GO:GO:0001703
EMBL:AL132876 RefSeq:NP_001122530.1 ProteinModelPortal:A8XQE0
SMR:A8XQE0 IntAct:A8XQE0 STRING:A8XQE0 PaxDb:A8XQE0
EnsemblMetazoa:Y105E8A.17b GeneID:173310 KEGG:cel:CELE_Y105E8A.17
UCSC:Y105E8A.17b CTD:173310 WormBase:Y105E8A.17b InParanoid:A8XQE0
OMA:LEKCKME NextBio:879105 ArrayExpress:A8XQE0 Uniprot:A8XQE0
Length = 488
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 138/397 (34%), Positives = 204/397 (51%)
Query: 28 DKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDAPPLLPTDSGQGYKHTKAKLGMRKVR 87
D T+K ++PEGM RE+F L+ +D ++PTD + YK K + G R VR
Sbjct: 17 DATKKPPKPGTSAPRKPEGMKRELFNLM--SGKDLTAVMPTDVKKTYKQ-KFQTGFRSVR 73
Query: 88 PWKWLPFSNPARKDNAVFHHWRRV--TDEGKEYPFARFNKQVSIPTYTDTEYLQELQSPT 145
+KW+PF+N +R D + HHW R + + YPF+RFNK + IP YTD EY L+
Sbjct: 74 KYKWMPFTNESRDDGLMLHHWVRADKVEAMQPYPFSRFNKVIDIPIYTDDEYENYLKIAK 133
Query: 146 WTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMRGTEC 205
W+R ETD+LFD C FDLR+ +++DR+D KF +RT+EDLK+R+Y + + L +R
Sbjct: 134 WSREETDYLFDTCRMFDLRWPIVYDRFDCKKFNQNRTVEDLKERFYSITYELGILRDPSS 193
Query: 206 SGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEEQMLLAELXXXXXXXXXXXXXTQDLQ 265
S P +DAEHE++RKEQL + + RT EQ++EE+ L AEL DLQ
Sbjct: 194 S----PTAYDAEHERRRKEQLNKQWNRTAEQLQEEEDLTAELRRIELRKKEREKKAHDLQ 249
Query: 266 KLMTAADMQADNRKTDK---KMPPKRKLTHQIRPRSLDTSVKTTAFQTLIDLGLNPIPTE 322
KL+ ++ Q + KRK + + S+ T+ TT F L D+ + +
Sbjct: 250 KLINMSEQQPASPSAGGIGGAASAKRKNAFRTKAGSISTTA-TTFFNPL-DISVTALRFS 307
Query: 323 EIVTHYNELR-SDMVLLYELKQA-LDNYQFELQSLKHQYEAV--HP-GETFQ-IPEKIFE 376
E + R +M L + Q L N + L+ K + V P +T+ +I
Sbjct: 308 EFKSSGAHFRCQEMKLPTNIGQKKLKNIEVVLEKCKMEMNPVASEPIMKTYNDFRSQIML 367
Query: 377 PTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRF 413
L S + E+ EL+S E FD+ RF
Sbjct: 368 AQELKSAMQTAEF--ELESIRTRMQENGKDFDIEPRF 402
Score = 263 (97.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 68/213 (31%), Positives = 103/213 (48%)
Query: 279 KTDKKMPPKRKLTHQIRPRSLDTSVKTTAFQTLIDLGLNPI-PTEEIVTHYNELRSDMVL 337
K K PPK + +P + K F + L + PT+ T+ + ++
Sbjct: 16 KDATKKPPKPGTSAPRKPEGM----KRELFNLMSGKDLTAVMPTDVKKTYKQKFQTGFRS 71
Query: 338 LYELK-QALDNYQFELQSLKHQYEAVHPGETFQ-IPEKIFEPTSLLSNLGDTEYLQELQS 395
+ + K N + + H + E Q P F + D EY L+
Sbjct: 72 VRKYKWMPFTNESRDDGLMLHHWVRADKVEAMQPYPFSRFNKVIDIPIYTDDEYENYLKI 131
Query: 396 PTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGT 455
W+R ETD+LFD C FDLR+ +++DR+D KF +RT+EDLK+R+Y + Y L +R
Sbjct: 132 AKWSREETDYLFDTCRMFDLRWPIVYDRFDCKKFNQNRTVEDLKERFYSITYELGILRDP 191
Query: 456 ECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQ 488
S P +DAEHE++RKEQL + + RT EQ
Sbjct: 192 SSS----PTAYDAEHERRRKEQLNKQWNRTAEQ 220
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 546 (197.3 bits), Expect = 7.8e-51, P = 7.8e-51
Identities = 107/195 (54%), Positives = 133/195 (68%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQ F +D VLY+S+HRHD GNFFPGTG E G G +N+ +SG +
Sbjct: 646 WDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNVPFSGDV 705
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
M D EYLAA+RT++ PV F P ++VSAGFDA GHP LGGY+++P FGYMT+
Sbjct: 706 ---MRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTK 762
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPP--LSQEELTRSPCLKAVET 710
L+ A GKVVLALEGGYDL S+ ++A+ CV+AL+G++ LS L P AVET
Sbjct: 763 SLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPSAVET 822
Query: 711 LQKTIAIQVSHWPVL 725
LQK IAI S+WP L
Sbjct: 823 LQKVIAIHKSYWPAL 837
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 508 (183.9 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 98/196 (50%), Positives = 136/196 (69%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ +F D VLY+S+HR+D G FFP G + G AG GF +N+AW+G
Sbjct: 657 WDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNG 716
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P +GD EYLAA+ +V+P+A EF+P++VLVSAGFDAA G P LGG ++SP C+ ++
Sbjct: 717 ---PRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDP--LGGCQVSPECYAHL 771
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA+G+++L LEGGY+L S+ +S AC R+LLGD+PP L+ L R P +A+ +
Sbjct: 772 THLLMGLANGRIILILEGGYNLISISESMAACTRSLLGDSPPLLT---LLRPPLSRALAS 828
Query: 711 LQKTIAIQVSHWPVLK 726
+ +T I +W L+
Sbjct: 829 IAETTQIHRRYWRSLR 844
Score = 403 (146.9 bits), Expect = 5.4e-34, P = 5.4e-34
Identities = 91/202 (45%), Positives = 117/202 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 262 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 321
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF +++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 322 V---GMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPK--GEMAATPAGFAQL 376
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK++L+LEGGY+L S+ + A + LLGD P PL E +PC A +
Sbjct: 377 THLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGD-PCPLL--EFPGAPCPSAQAS 433
Query: 711 LQKTIAIQVSHWPVLKRSAHTI 732
L + W VL RSA T+
Sbjct: 434 LSCALEALEPFWEVLVRSAETL 455
Score = 64 (27.6 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
QR V + + +GT+ + +P L+ + H ++ L G G G G+
Sbjct: 255 QRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYT 314
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 315 INVPWNQV---GMRDADYIAA 332
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 504 (182.5 bits), Expect = 7.4e-47, Sum P(2) = 7.4e-47
Identities = 100/196 (51%), Positives = 136/196 (69%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ IF D VLY+S+HR+D G FFP G + G AG GF +N+AW+G
Sbjct: 661 WDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNG 720
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P +GDA+YLAA+ +V+P+A EF+P++VLVSAGFDAA G P LGG ++SP + ++
Sbjct: 721 ---PRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDP--LGGCQVSPEGYAHL 775
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA+G+VVL LEGGY+L S+ +S AC R+LLGD PP L+ L+R P A+ +
Sbjct: 776 THLLMGLANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLT---LSRPPLSGALAS 832
Query: 711 LQKTIAIQVSHWPVLK 726
+ +TI + +W L+
Sbjct: 833 ITETIQVHRRYWRSLR 848
Score = 390 (142.3 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 88/202 (43%), Positives = 115/202 (56%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 325
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF +++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 326 V---GMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPK--GEMATTPAGFAQL 380
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK++L+LEGGY+L ++ + A + LLGD P L E +PC A +
Sbjct: 381 THLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPIL---ESPSAPCPSAQAS 437
Query: 711 LQKTIAIQVSHWPVLKRSAHTI 732
L + W VL RSA +
Sbjct: 438 LFCALEALEPFWEVLVRSAEAL 459
Score = 61 (26.5 bits), Expect = 7.4e-47, Sum P(2) = 7.4e-47
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
+R V + + +GT+ + +P L+ + H ++ L G G G G+
Sbjct: 259 ERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYT 318
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 319 INVPWNQV---GMRDADYIAA 336
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 499 (180.7 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 98/196 (50%), Positives = 134/196 (68%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ +F D VLY+S+HR+D G FFP G + G AG GF +N+AW+G
Sbjct: 648 WDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNG 707
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P MGDA+YLAA+ +V+P+A EF+P++VLVSAGFDAA G P LGG ++SP + ++
Sbjct: 708 ---PRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDP--LGGCQVSPEGYAHL 762
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA G+++L LEGGY+L S+ +S AC R+LLGD PP L+ L R P A+ +
Sbjct: 763 THLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLT---LPRPPLSGALAS 819
Query: 711 LQKTIAIQVSHWPVLK 726
+ +TI + +W L+
Sbjct: 820 ITETIQVHRRYWRSLR 835
Score = 395 (144.1 bits), Expect = 4.7e-33, P = 4.7e-33
Identities = 90/213 (42%), Positives = 119/213 (55%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 252 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 311
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF +++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 312 V---GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPK--GEMAATPAGFAQL 366
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK++L+LEGGY+L ++ + A + LLGD P L E +PC A +
Sbjct: 367 THLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPML---ESPGAPCRSAQAS 423
Query: 711 LQKTIAIQVSHWPVLKRSAHTITWSALSAAEDN 743
+ + W VL RS T+ + EDN
Sbjct: 424 VSCALEALEPFWEVLVRSTETVERDNME--EDN 454
Score = 60 (26.2 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
+R V + + +GT+ + +P L+ + H ++ L G G G G+
Sbjct: 245 RRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYT 304
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 305 INVPWNQV---GMRDADYIAA 322
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 499 (180.7 bits), Expect = 5.1e-46, Sum P(2) = 5.1e-46
Identities = 98/196 (50%), Positives = 134/196 (68%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ +F D VLY+S+HR+D G FFP G + G AG GF +N+AW+G
Sbjct: 662 WDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNG 721
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P MGDA+YLAA+ +V+P+A EF+P++VLVSAGFDAA G P LGG ++SP + ++
Sbjct: 722 ---PRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDP--LGGCQVSPEGYAHL 776
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA G+++L LEGGY+L S+ +S AC R+LLGD PP L+ L R P A+ +
Sbjct: 777 THLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLT---LPRPPLSGALAS 833
Query: 711 LQKTIAIQVSHWPVLK 726
+ +TI + +W L+
Sbjct: 834 ITETIQVHRRYWRSLR 849
Score = 395 (144.1 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 90/213 (42%), Positives = 119/213 (55%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 325
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF +++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 326 V---GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPK--GEMAATPAGFAQL 380
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK++L+LEGGY+L ++ + A + LLGD P L E +PC A +
Sbjct: 381 THLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPML---ESPGAPCRSAQAS 437
Query: 711 LQKTIAIQVSHWPVLKRSAHTITWSALSAAEDN 743
+ + W VL RS T+ + EDN
Sbjct: 438 VSCALEALEPFWEVLVRSTETVERDNME--EDN 468
Score = 60 (26.2 bits), Expect = 5.1e-46, Sum P(2) = 5.1e-46
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
+R V + + +GT+ + +P L+ + H ++ L G G G G+
Sbjct: 259 RRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYT 318
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 319 INVPWNQV---GMRDADYIAA 336
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 490 (177.5 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 98/196 (50%), Positives = 131/196 (66%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WD+HHGNGTQ IF D VLY+S+HR+D G FFP G G G GF +N+AW+G
Sbjct: 648 WDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNG 707
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P MGDA+YLAA+ +V+PVA EF+P++VLVSAGFDAA G P LGG ++SP + ++
Sbjct: 708 ---PRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDP--LGGCQVSPEGYAHL 762
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T QLM LA+G ++L LEGGY+L S+ +S AC R+LLGD P L++ R P A +
Sbjct: 763 THQLMGLANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTR---LRPPLSGAQAS 819
Query: 711 LQKTIAIQVSHWPVLK 726
+ KTI + +W L+
Sbjct: 820 ITKTIQVHRRYWRSLR 835
Score = 389 (142.0 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 87/202 (43%), Positives = 115/202 (56%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG G Q F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 252 WDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQ 311
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF +++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 312 V---GMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPK--GEMAATPAGFAQL 366
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA+GK++L+LEGGY+L S+ + A + LLGD P L E +PC A +
Sbjct: 367 THLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVL---ESPGAPCPSAQAS 423
Query: 711 LQKTIAIQVSHWPVLKRSAHTI 732
L T+ W L RS ++
Sbjct: 424 LSCTLEALEPFWESLVRSVESL 445
Score = 59 (25.8 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
QR V + + +G + + +P L+ + H ++ L G G G G+
Sbjct: 245 QRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYT 304
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 305 INVPWNQV---GMQDADYIAA 322
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 484 (175.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 94/196 (47%), Positives = 132/196 (67%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ IF D VLY+S+HR+D G FFP G + G AG+GF +N+ W+G
Sbjct: 647 WDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNG 706
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P MGDA+YLAA+ +V+P+A EF+P++VL+SAGFDAA G P LGG +++P + ++
Sbjct: 707 ---PRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDP--LGGCQVTPEGYAHL 761
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA G+++L LEGGY+L S+ +S AC +LLGD PP L+ L R P A+ +
Sbjct: 762 THLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDPPPQLT---LLRPPQSGALVS 818
Query: 711 LQKTIAIQVSHWPVLK 726
+ + I + +W L+
Sbjct: 819 ISEVIQVHRKYWRSLR 834
Score = 404 (147.3 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 89/201 (44%), Positives = 118/201 (58%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ IF D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWN- 309
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M DA+Y+AAF I++PVA EF PQ+VLV+AGFDA H P G +PA F ++
Sbjct: 310 --QTGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDAL--HGDPKGEMAATPAGFAHL 365
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK++L+LEGGY+L ++ A + LLGD P P+ + + PC A +
Sbjct: 366 THLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGD-PCPMLESCVV--PCASAQTS 422
Query: 711 LQKTIAIQVSHWPVLKRSAHT 731
+ T+ W VL+RS T
Sbjct: 423 IYCTLEALEPFWEVLERSVET 443
Score = 61 (26.5 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
QR V + + +GT+ +P L+ + H + L G G G G+
Sbjct: 244 QRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYT 303
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 304 INVPWN---QTGMRDADYIAA 321
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 472 (171.2 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 98/215 (45%), Positives = 134/215 (62%)
Query: 514 AEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGP 571
A Y S RE + WDVHHGNGTQ IF D VLY+S+HR++DG FFP +
Sbjct: 593 ARYAQSITRESLRVLIVD-WDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANY 651
Query: 572 IECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAA 631
+ G G G G+N+NI W+G MGD EY+AAF +VMP+A+EF P++VLVSAGFDAA
Sbjct: 652 DKVGLGKGRGYNVNIPWNGG---KMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAAR 708
Query: 632 GHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAP 691
G P LGG++++P + ++T QLM+LA G+V++ LEGGY+L S+ +S C LLGD+P
Sbjct: 709 GDP--LGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSP 766
Query: 692 PPLSQEELTRSPCLKAVETLQKTIAIQVSHWPVLK 726
P L + LT A ++ + W L+
Sbjct: 767 PSL--DHLTPLKT-SATVSINNVLRAHAPFWSSLR 798
Score = 425 (154.7 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 87/196 (44%), Positives = 122/196 (62%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S+HR++DG+F+P G+GAG G+NIN+ W+
Sbjct: 229 WDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNK 288
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M +Y+ AF+ +++PVA EF PQ+VLV+AGFDA G P GG ++SP CF +
Sbjct: 289 V---GMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPK--GGMQVSPECFSIL 343
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T L +A G++VLALEGGY+L S + A +R+LLGD P L + +PC A+++
Sbjct: 344 THMLKGVAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPS---SGAPCESALKS 400
Query: 711 LQKTIAIQVSHWPVLK 726
+ KTI+ W L+
Sbjct: 401 ISKTISDLYPFWKSLQ 416
Score = 73 (30.8 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 38/171 (22%), Positives = 69/171 (40%)
Query: 340 ELKQALDNY-QFELQSLKHQYEAV--HPGETFQIPEKIFEPTSLLSNLGDTEYLQ--ELQ 394
EL ++ N + EL++L +Y++V HPG + L+ + ++ +
Sbjct: 128 ELMKSTQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSIN 187
Query: 395 SPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRG 454
P A+ D + C F+ + I RY + QR V + + +G
Sbjct: 188 RPPGHHAQADKMNGFC-MFNN--LAIAARYAQKRHRV--------QRVLIVDWDVHHGQG 236
Query: 455 TECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFNINIAWS 504
+ +P L+ + H + L E G+GAG G+NIN+ W+
Sbjct: 237 IQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWN 287
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 478 (173.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 99/196 (50%), Positives = 129/196 (65%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTG-GPIE-CGTGAGLGFNINIAWSG 590
WD+HHGNGTQ FY D VLY+S+HR+++G F+PGT G E CG G GLG +NI WS
Sbjct: 233 WDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSC 292
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
A MGD +Y+ AF+ +VMPVA EFDP +V+VS GFDAAAG +G + L+PA + +M
Sbjct: 293 A---GMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDH--IGQFLLTPAAYAHM 347
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ LM LADGKV ++LEGGY+L S+ SA A ++LLG P L T C +AV T
Sbjct: 348 TQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLH----TTYACPQAVAT 403
Query: 711 LQKTIAIQVSHWPVLK 726
+ IQ +W ++
Sbjct: 404 INHVTKIQSQYWRCMR 419
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 475 (172.3 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 92/196 (46%), Positives = 129/196 (65%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHGNGTQ IF D VLY+S+HR+D G FFP G + G AG GF +N+ W+G
Sbjct: 650 WDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNG 709
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
P MGDA+YLA + +V+P+A EF+P++VL+SAGFDAA G P LGG +++P + ++
Sbjct: 710 ---PRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDP--LGGCQVTPEGYAHL 764
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA G+++L LEGGY+L S+ +S AC +LLGD PP L+ R P A+ +
Sbjct: 765 THLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTS---LRPPQSGALAS 821
Query: 711 LQKTIAIQVSHWPVLK 726
+ + I + +W L+
Sbjct: 822 ISEVIQVHRKYWRSLR 837
Score = 393 (143.4 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 87/199 (43%), Positives = 117/199 (58%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ IF D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 310
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGG-YKLSPACFGY 649
M DA+Y+AAF I++PVA EF PQ+VLV+AGFDA G P G +PA F +
Sbjct: 311 V---GMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAH 367
Query: 650 MTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVE 709
+T LM LA GK++L+LEGGY+L ++ + LLGD P P+ + + +PC A
Sbjct: 368 LTHFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGD-PCPMLESPV--APCASAQT 424
Query: 710 TLQKTIAIQVSHWPVLKRS 728
++ T+ W VL+RS
Sbjct: 425 SISCTLEALEPFWEVLERS 443
Score = 60 (26.2 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPK-LFDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
QR V + + +GT+ +P L+ + H + L G G G G+
Sbjct: 244 QRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYT 303
Query: 499 INIAWSGALNPPMGDAEYLSS 519
IN+ W+ M DA+Y+++
Sbjct: 304 INVPWNQV---GMRDADYIAA 321
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 466 (169.1 bits), Expect = 8.8e-43, Sum P(2) = 8.8e-43
Identities = 102/238 (42%), Positives = 145/238 (60%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP-GTGGPIEC-GTGAGLGFNINIAWSG 590
WDVHHGNGTQ IF S+ +VLY+S+HR++ G+FFP G G + G GAG GFN+NI W+
Sbjct: 710 WDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWN- 768
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MGD EY AF+ ++MP+A EF+PQ+VLVSAGFDAA G P LGG K++ +G +
Sbjct: 769 --KKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDP--LGGCKVTAEGYGML 824
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGD-APPP-LSQEELTRSPCL--- 705
T L LA G++++ LEGGY++ S+ + C + LLGD P P L L + P +
Sbjct: 825 THWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQ 884
Query: 706 KAVETLQKTIAIQVSHWPVLKRSAHTITWSALSAAEDNETVSAMASLSMNKKHLQVED 763
VE+LQ+ + +Q +HW L+ + + +NE ASL +HL + +
Sbjct: 885 SCVESLQQCLQVQRNHWRSLEFVGRRLPRDPVVGENNNEDFLT-ASL----RHLNISN 937
Score = 392 (143.0 bits), Expect = 8.9e-33, P = 8.9e-33
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
+DVHHG GTQ+ FY+D RV+Y SIHR + G+F+P G+GAG G+N N+ +
Sbjct: 283 YDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNA 342
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M + +YLA F+ +++PVA EF P++++VSAG+DAA G P G +++PAC+ ++
Sbjct: 343 T---GMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPE--GEMEVTPACYPHL 397
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
L+ LAD +V + LEGGY L S+ + A +R+LLGD PPL E P + +
Sbjct: 398 LNPLLRLADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPCPPLV--ETVPLPRAELAQA 455
Query: 711 LQKTIAIQVSHWPVLK 726
L IA+ HW L+
Sbjct: 456 LLSCIAVHRPHWRCLQ 471
Score = 65 (27.9 bits), Expect = 8.8e-43, Sum P(2) = 8.8e-43
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 440 QRYYFVCYTLAKMRGTECSGGNEPKL-FDAEHEKKRKEQLKRLFERTPEQCGTGAGLGFN 498
QR + Y + +GT+ N+P++ + + H + L E G+GAG G+N
Sbjct: 276 QRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYN 335
Query: 499 INIAWSGALNPPMGDAEYLS 518
N+ + M + +YL+
Sbjct: 336 FNVPLNAT---GMTNGDYLA 352
Score = 43 (20.2 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 26/120 (21%), Positives = 49/120 (40%)
Query: 377 PTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIE 436
P L SN LQ L++ T + F +C+ +D + ++ + DT I+
Sbjct: 518 PEKLTSNAAR---LQVLRAETKLSVPS---FKVCYAYDAQMLLHCNLNDTGHPEQPSRIQ 571
Query: 437 DLKQRYYFVCYTLAK-MRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQCGTGAGL 495
+ + + Y L K M+ ++ A H + ++RL R P++ AG+
Sbjct: 572 HIHKMHDD--YGLLKQMKQLSPRAATTDEVCLA-HTRAHVNTVRRLLGREPKELHDAAGI 628
Score = 40 (19.1 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 278 RKTDKKMPPKRKLTHQIRPRSL--DTSVKTTAF--------QTLIDLGLNPI--PTEEI- 324
R T +PP++ ++ R + L +T + +F Q L+ LN P +
Sbjct: 510 RDTAIPLPPEKLTSNAARLQVLRAETKLSVPSFKVCYAYDAQMLLHCNLNDTGHPEQPSR 569
Query: 325 VTHYNELRSDMVLLYELKQ 343
+ H +++ D LL ++KQ
Sbjct: 570 IQHIHKMHDDYGLLKQMKQ 588
>UNIPROTKB|Q5TG37 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0035267 "NuA4
histone acetyltransferase complex" evidence=IEA] [GO:0043967
"histone H4 acetylation" evidence=IEA] [GO:0043968 "histone H2A
acetylation" evidence=IEA] InterPro:IPR027109 GO:GO:0008168
EMBL:AL035417 UniGene:Hs.8008 HGNC:HGNC:18291 PANTHER:PTHR12855
HOGENOM:HOG000198262 HOVERGEN:HBG103379 IPI:IPI00641689 SMR:Q5TG37
STRING:Q5TG37 Ensembl:ENST00000372290 Uniprot:Q5TG37
Length = 132
Score = 455 (165.2 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 86/142 (60%), Positives = 103/142 (72%)
Query: 24 IIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDAPPLLPTDSGQGYKHTKAKLGM 83
II DK + + ++ KRPEGM REV+ALL +D +DAPPLLP+D+GQGY+ KAKLG
Sbjct: 1 IINPDKKKSKKSSETLTFKRPEGMHREVYALLYSDKKDAPPLLPSDTGQGYRTVKAKLGS 60
Query: 84 RKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYPFARFNKQVSIPTYTDTEYLQELQS 143
+KVRPWKW+PF+NPARKD A+F HWRR +EGK+YPFARFNK EY L
Sbjct: 61 KKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYPFARFNK----------EYQLYLHD 110
Query: 144 PTWTRAETDHLFDLCHRFDLRF 165
WT+AETDHLFDL RFDLRF
Sbjct: 111 DAWTKAETDHLFDLSRRFDLRF 132
Score = 106 (42.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 388 EYLQELQSPTWTRAETDHLFDLCHRFDLRF 417
EY L WT+AETDHLFDL RFDLRF
Sbjct: 103 EYQLYLHDDAWTKAETDHLFDLSRRFDLRF 132
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 447 (162.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 86/193 (44%), Positives = 126/193 (65%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQ+IF +K VLY+S+HRH+ GNF+PGTG E G+ G G+ +N+ WS
Sbjct: 312 WDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCG- 370
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+GD +Y+ AF+ +V+P+A F P V++SAGFDAA G P LG ++PA + MTQ
Sbjct: 371 --GVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDP--LGCCDVTPAGYSRMTQ 426
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
L L GK+++ LEGGY+L S+ SA A ++ LLG+ P ++ + +P + ++T+
Sbjct: 427 MLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPE--NELPIATTPSVAGLQTVL 484
Query: 713 KTIAIQVSHWPVL 725
+ IQ+ WP L
Sbjct: 485 DVLNIQLEFWPSL 497
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 459 (166.6 bits), Expect = 1.0e-40, P = 1.0e-40
Identities = 91/192 (47%), Positives = 126/192 (65%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
WDVHHGNG Q+ FY D VLY+S+H + +G+F+PG G CG GAG G N+NI W
Sbjct: 306 WDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPWP- 364
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
+ MGD +Y+ AF +VMP+A+EFDP +V++++GFDAAAG LGG ++PAC+ +M
Sbjct: 365 --SQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDT--LGGCFVTPACYAHM 420
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LMTLA GKV + LEGGY+ S+ SA A + L+G+ P LS T P A+ T
Sbjct: 421 THMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLS---FT-CPSEAAIST 476
Query: 711 LQKTIAIQVSHW 722
+++ +IQ +W
Sbjct: 477 IRRVSSIQSDYW 488
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 434 (157.8 bits), Expect = 3.9e-40, P = 3.9e-40
Identities = 96/215 (44%), Positives = 123/215 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S HR++ G F+P G G G GF +N+ W+
Sbjct: 53 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQ 112
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+YLAAF +++PVA EFDP++VLVSAGFD+A G P G + +P CFG++
Sbjct: 113 V---GMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPE--GQMQATPECFGHL 167
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G+V LEGGY L S+ S VRALLGD PPLS P A+E+
Sbjct: 168 TQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGP---MEPHRSALES 224
Query: 711 LQKTIAIQVSHWPVLKRSAHTITWSALSAAEDNET 745
+Q A Q HW L++ T + + D T
Sbjct: 225 IQSVRAAQAPHWTSLQQQGSAPTPRPGTCSADGRT 259
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 453 (164.5 bits), Expect = 4.6e-40, P = 4.6e-40
Identities = 93/204 (45%), Positives = 128/204 (62%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPG-------TGGPIE-CGTGAGLGFNI 584
WDVHHGNG Q +FY D VLY+S+H + +G F+PG G I CG+G GLG NI
Sbjct: 273 WDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGPGLGRNI 332
Query: 585 NIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSP 644
NI W + MGD EY+AAF+ I+MP+A EF+P +V++SAGFDAAAG LGG ++P
Sbjct: 333 NIGWD---DQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQ--LGGCFVTP 387
Query: 645 ACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPC 704
C+ +MT LM+LA G+V + LEGGY+L ++ SA A R L+G+ PP + SP
Sbjct: 388 PCYAHMTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPPKMGMA----SPK 443
Query: 705 L--KAVETLQKTIAIQVSHWPVLK 726
+ +A L + A Q +W ++
Sbjct: 444 INREAARLLAQVQAYQAPYWECMR 467
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 452 (164.2 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 120/366 (32%), Positives = 186/366 (50%)
Query: 371 PEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 430
PEK +L L ++ L++ R T+ L H + ++ H R T
Sbjct: 447 PEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT---KKMLEHLR-TTETMK 502
Query: 431 TSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTP-EQC 489
+E+ ++ + + T ++ + G + D EK ++ + R P
Sbjct: 503 DEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHA 562
Query: 490 GTGAGLGFNINIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDK 549
GF I N A+Y + R K + WDVHHGNGTQ+IFY D
Sbjct: 563 SASKSSGFCI-------FNNVAVAAKY--AQRRHKAKRVLILDWDVHHGNGTQEIFYEDS 613
Query: 550 RVLYLSIHRHDDGNFFPGTGGP---IECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFR 606
V+Y+SIHRHD GNF+P G P + G GAG G ++N+ +SG MGD EY AF+
Sbjct: 614 NVMYMSIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGV---QMGDNEYQMAFQ 669
Query: 607 TIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLAL 666
++MP+A +F+P +VL+SAGFDAA P LG YK++P F MT QL +LA G+++ L
Sbjct: 670 RVIMPIAYQFNPDLVLISAGFDAAVDDP--LGEYKVTPETFALMTYQLSSLAGGRIITVL 727
Query: 667 EGGYDLPSMCDSAEACVRALLGDAPPPLSQEE----LTRSPCLKA--VETLQKTIAIQVS 720
EGGY+L S+ +SA+A L + +EE T+ +++ ++T+++ A+Q
Sbjct: 728 EGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQK 787
Query: 721 HWPVLK 726
+W +LK
Sbjct: 788 YWSILK 793
Score = 367 (134.2 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPI--ECGTGAGLGFNINIAWSGA 591
DVHHG+GTQ+IFY DKRVLY SIHRH+ G F+P G+G GLG+N N+A
Sbjct: 182 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLA---- 237
Query: 592 LNPP-MGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
LN D++YL+ +++P+A +FDP V++SAGFDA G P LGG L+P + ++
Sbjct: 238 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDP--LGGMCLTPDGYSHI 295
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
L +LA G++++ LEGGY+ + + CVR LLG AP + EL +P V++
Sbjct: 296 LYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI---ELNEAPKESTVDS 352
Query: 711 LQKTIAIQVSHW 722
+++ HW
Sbjct: 353 CVSLVSVLRHHW 364
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 452 (164.2 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 120/366 (32%), Positives = 186/366 (50%)
Query: 371 PEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 430
PEK +L L ++ L++ R T+ L H + ++ H R T
Sbjct: 449 PEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT---KKMLEHLR-TTETMK 504
Query: 431 TSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTP-EQC 489
+E+ ++ + + T ++ + G + D EK ++ + R P
Sbjct: 505 DEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHA 564
Query: 490 GTGAGLGFNINIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDK 549
GF I N A+Y + R K + WDVHHGNGTQ+IFY D
Sbjct: 565 SASKSSGFCI-------FNNVAVAAKY--AQRRHKAKRVLILDWDVHHGNGTQEIFYEDS 615
Query: 550 RVLYLSIHRHDDGNFFPGTGGP---IECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFR 606
V+Y+SIHRHD GNF+P G P + G GAG G ++N+ +SG MGD EY AF+
Sbjct: 616 NVMYMSIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGV---QMGDNEYQMAFQ 671
Query: 607 TIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLAL 666
++MP+A +F+P +VL+SAGFDAA P LG YK++P F MT QL +LA G+++ L
Sbjct: 672 RVIMPIAYQFNPDLVLISAGFDAAVDDP--LGEYKVTPETFALMTYQLSSLAGGRIITVL 729
Query: 667 EGGYDLPSMCDSAEACVRALLGDAPPPLSQEE----LTRSPCLKA--VETLQKTIAIQVS 720
EGGY+L S+ +SA+A L + +EE T+ +++ ++T+++ A+Q
Sbjct: 730 EGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQK 789
Query: 721 HWPVLK 726
+W +LK
Sbjct: 790 YWSILK 795
Score = 367 (134.2 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPI--ECGTGAGLGFNINIAWSGA 591
DVHHG+GTQ+IFY DKRVLY SIHRH+ G F+P G+G GLG+N N+A
Sbjct: 184 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLA---- 239
Query: 592 LNPP-MGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
LN D++YL+ +++P+A +FDP V++SAGFDA G P LGG L+P + ++
Sbjct: 240 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDP--LGGMCLTPDGYSHI 297
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
L +LA G++++ LEGGY+ + + CVR LLG AP + EL +P V++
Sbjct: 298 LYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI---ELNEAPKESTVDS 354
Query: 711 LQKTIAIQVSHW 722
+++ HW
Sbjct: 355 CVSLVSVLRHHW 366
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 452 (164.2 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 120/366 (32%), Positives = 186/366 (50%)
Query: 371 PEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP 430
PEK +L L ++ L++ R T+ L H + ++ H R T
Sbjct: 449 PEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHT---KKMLEHLR-TTETMK 504
Query: 431 TSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTP-EQC 489
+E+ ++ + + T ++ + G + D EK ++ + R P
Sbjct: 505 DEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPGHHA 564
Query: 490 GTGAGLGFNINIAWSGALNPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDK 549
GF I N A+Y + R K + WDVHHGNGTQ+IFY D
Sbjct: 565 SASKSSGFCI-------FNNVAVAAKY--AQRRHKAKRVLILDWDVHHGNGTQEIFYEDS 615
Query: 550 RVLYLSIHRHDDGNFFPGTGGP---IECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFR 606
V+Y+SIHRHD GNF+P G P + G GAG G ++N+ +SG MGD EY AF+
Sbjct: 616 NVMYMSIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGV---QMGDNEYQMAFQ 671
Query: 607 TIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLAL 666
++MP+A +F+P +VL+SAGFDAA P LG YK++P F MT QL +LA G+++ L
Sbjct: 672 RVIMPIAYQFNPDLVLISAGFDAAVDDP--LGEYKVTPETFALMTYQLSSLAGGRIITVL 729
Query: 667 EGGYDLPSMCDSAEACVRALLGDAPPPLSQEE----LTRSPCLKA--VETLQKTIAIQVS 720
EGGY+L S+ +SA+A L + +EE T+ +++ ++T+++ A+Q
Sbjct: 730 EGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAVQQK 789
Query: 721 HWPVLK 726
+W +LK
Sbjct: 790 YWSILK 795
Score = 367 (134.2 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPI--ECGTGAGLGFNINIAWSGA 591
DVHHG+GTQ+IFY DKRVLY SIHRH+ G F+P G+G GLG+N N+A
Sbjct: 184 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLA---- 239
Query: 592 LNPP-MGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
LN D++YL+ +++P+A +FDP V++SAGFDA G P LGG L+P + ++
Sbjct: 240 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDP--LGGMCLTPDGYSHI 297
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
L +LA G++++ LEGGY+ + + CVR LLG AP + EL +P V++
Sbjct: 298 LYHLKSLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSI---ELNEAPKESTVDS 354
Query: 711 LQKTIAIQVSHW 722
+++ HW
Sbjct: 355 CVSLVSVLRHHW 366
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 434 (157.8 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 96/215 (44%), Positives = 123/215 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S HR++ G F+P G G G GF +N+ W+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+YLAAF +++PVA EFDP++VLVSAGFD+A G P G + +P CFG++
Sbjct: 231 V---GMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPE--GQMQATPECFGHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G+V LEGGY L S+ S VRALLGD PPLS P A+E+
Sbjct: 286 TQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGP---MEPHRSALES 342
Query: 711 LQKTIAIQVSHWPVLKRSAHTITWSALSAAEDNET 745
+Q A Q HW L++ T + + D T
Sbjct: 343 IQSVRAAQAPHWTSLQQQGSAPTPRPGTCSADGRT 377
Score = 51 (23.0 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 295 RPRSLDTSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRS-DMVLLYELKQALDNYQFELQ 353
RP L +++ L L P E + S + V L QALD EL+
Sbjct: 27 RPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQALDTQ--ELR 84
Query: 354 SLKHQYEAV--HPGETF 368
+L QY+AV HP TF
Sbjct: 85 ALSGQYDAVYFHPS-TF 100
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 431 (156.8 bits), Expect = 9.2e-38, Sum P(2) = 9.2e-38
Identities = 89/197 (45%), Positives = 120/197 (60%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q +F D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 171 WDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+Y+AAF +++P+A EFDP++VLVSAGFD+A G P G + +P CF ++
Sbjct: 231 V---GMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPE--GQMQATPECFAHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G+V LEGGY L S+ +S V+ LLGD PPLS +PC A+E+
Sbjct: 286 TQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGP---MAPCQSALES 342
Query: 711 LQKTIAIQVSHWPVLKR 727
+Q A Q HW L++
Sbjct: 343 IQSARAAQAPHWKSLQQ 359
Score = 40 (19.1 bits), Expect = 9.2e-38, Sum P(2) = 9.2e-38
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 351 ELQSLKHQYEAV--HPGETF 368
ELQ+L Q++A+ HP TF
Sbjct: 82 ELQALSGQFDAIYFHPS-TF 100
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 429 (156.1 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 90/198 (45%), Positives = 123/198 (62%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP-GTGGPIEC-GTGAGLGFNINIAWSG 590
WD+HHGNGTQ++F+ D RVL S+HRHD G+F+P G G G G G GFNIN+ W
Sbjct: 230 WDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQ 289
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
GDA+YLA + I++PV KEF P I+L+SAGFDAA G P LGG ++P + M
Sbjct: 290 G---GCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDP--LGGCCVTPYGYSVM 344
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
++LM A GK+VLALEGGY+L S+ S+ ACV+ LL D S E + ++
Sbjct: 345 LKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQA 404
Query: 711 LQKTIAIQVSHWPVLKRS 728
+++ + ++WP L S
Sbjct: 405 VRERLC---TYWPSLDAS 419
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 427 (155.4 bits), Expect = 2.9e-37, P = 2.9e-37
Identities = 127/413 (30%), Positives = 202/413 (48%)
Query: 327 HYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPGETFQIPE--KIFEPTSLLSN- 383
HY+ L++ L Y+++ Y ++ + +Y HP + +I KI L+++
Sbjct: 52 HYSPLKTG--LCYDVRM---RYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDP 106
Query: 384 -LGDTEYLQELQSPTWTRAET-DHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQ- 440
L + L +L RA T + + ++ + L FI T K +++ ++
Sbjct: 107 TLSGVDDLGDLMLKIPVRAATSEEILEVHTKEHLEFIE-----STEKMSREELLKETEKG 161
Query: 441 -RYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRL--FERTPEQCGTGAGLGF 497
YF + A R C G E E K + R P+ G G L
Sbjct: 162 DSVYFNNDSYASAR-LPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAG-GFCLFS 219
Query: 498 NINIAWSGAL-NPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSI 556
N+ +A L N P + D WD+HHGNGTQ+ FY D +VLY+S+
Sbjct: 220 NVAVAAKNILKNYPESVRRIMILD------------WDIHHGNGTQKSFYQDDQVLYVSL 267
Query: 557 HRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAK 614
HR + G ++PGT G + G G G GFN NI W +GDAEY+ AF +VMP+ +
Sbjct: 268 HRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVG---GVGDAEYMWAFEQVVMPMGR 324
Query: 615 EFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPS 674
EF P +V++S+GFDAA G +G ++P+C+G+MT L +LA G + + LEGGY+L +
Sbjct: 325 EFKPDLVIISSGFDAADGDT--IGQCHVTPSCYGHMTHMLKSLARGNLCVVLEGGYNLDA 382
Query: 675 MCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTIAIQVSHWPVLKR 727
+ SA + + L+G+ P L + L+ P + +E + K I +Q +W +R
Sbjct: 383 IARSALSVAKVLIGEPPDELP-DPLS-DPKPEVIEMIDKVIRLQSKYWNCFRR 433
>TAIR|locus:2065150 [details] [associations]
symbol:AT2G47210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR008468
InterPro:IPR009057 InterPro:IPR027109 Pfam:PF05499 SMART:SM00717
GO:GO:0005634 GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008168 KO:K11324 PANTHER:PTHR12855 EMBL:AY064024
EMBL:AY096610 EMBL:AB493595 IPI:IPI00547329 RefSeq:NP_850470.1
UniGene:At.27099 ProteinModelPortal:Q8VZL6 SMR:Q8VZL6 IntAct:Q8VZL6
PRIDE:Q8VZL6 EnsemblPlants:AT2G47210.1 GeneID:819334
KEGG:ath:AT2G47210 TAIR:At2g47210 HOGENOM:HOG000264889
InParanoid:Q8VZL6 OMA:VNLKPKV PhylomeDB:Q8VZL6
ProtClustDB:CLSN2680298 Genevestigator:Q8VZL6 Uniprot:Q8VZL6
Length = 441
Score = 361 (132.1 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 82/229 (35%), Positives = 125/229 (54%)
Query: 25 IGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDAPPLLPTDSGQGYKHTKAKLGMR 84
+ + + +K +P K + ++P+G++REV+AL PL+P+ + K+
Sbjct: 17 LSLTQEKKSRPQK-ESHRKPDGISREVYAL----TGGVAPLMPSIDLKRRPPADEKVA-- 69
Query: 85 KVRPWKWLPFSNPARKDNAVFHHWRRVTDEGK---EYPFARFNKQVSIPTYTDTEYLQEL 141
WKWL F+N ARKD+ +HW RV ++ +Y FA++NK V I YTD EY L
Sbjct: 70 ----WKWLSFTNSARKDDLQLYHWVRVVNDVPPTGDYSFAKYNKSVDILKYTDEEYENHL 125
Query: 142 QSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMR 201
WT+ ETD LF+ C FDLRF+VI DR FP SRT+E+LK RYY V L + R
Sbjct: 126 TDSVWTKEETDQLFEFCQNFDLRFVVIADR-----FPVSRTVEELKDRYYSVNRALLRAR 180
Query: 202 G-TECSGGNEPKL---FDAEHEKKRKEQLKRLFERTPEQVEEEQMLLAE 246
+ N P + +D +++RK L + ++ Q +++ +LAE
Sbjct: 181 AQSPADVANHPLMKEPYDITRDRERKRALSMVLSQSRHQEKKDAEILAE 229
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 42/107 (39%), Positives = 57/107 (53%)
Query: 386 DTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFV 445
D EY L WT+ ETD LF+ C FDLRF+VI DR FP SRT+E+LK RYY V
Sbjct: 118 DEEYENHLTDSVWTKEETDQLFEFCQNFDLRFVVIADR-----FPVSRTVEELKDRYYSV 172
Query: 446 CYTLAKMRG-TECSGGNEPKL---FDAEHEKKRKEQLKRLFERTPEQ 488
L + R + N P + +D +++RK L + ++ Q
Sbjct: 173 NRALLRARAQSPADVANHPLMKEPYDITRDRERKRALSMVLSQSRHQ 219
Score = 71 (30.1 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 309 QTLIDLGLN--P-IPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPG 365
QTL DLG+N P +PT+ + + ELR +++ L L++ L + E S + A P
Sbjct: 331 QTLQDLGVNLKPKVPTKTVCDEHLELRKEILTLLNLQKQLQYKESEGSSHREGSYAAMP- 389
Query: 366 ETFQIPEKIFEP 377
+T + +++F P
Sbjct: 390 DTPK--DRVFAP 399
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 427 (155.4 bits), Expect = 5.8e-37, P = 5.8e-37
Identities = 87/196 (44%), Positives = 125/196 (63%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
WD+HHGNGTQ+ FY+D RVLY+S+HR ++G F+PGT G + G G G GF INI W
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRS 364
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
+ M D +Y+ AF I+ PV EFDP +++VS+GFDAA G +G ++PA +GYM
Sbjct: 365 S---GMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDV--IGACHVTPAGYGYM 419
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T L +A GK+ + LEGGY+L S+ SA A + L+G+ PP + +T P +A+E
Sbjct: 420 THTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGE--PP--ENTITLRPQAEAIEV 475
Query: 711 LQKTIAIQVSHWPVLK 726
+ + I IQ ++ L+
Sbjct: 476 VDEVIKIQSKYFKSLR 491
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 427 (155.4 bits), Expect = 5.8e-37, P = 5.8e-37
Identities = 87/196 (44%), Positives = 125/196 (63%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
WD+HHGNGTQ+ FY+D RVLY+S+HR ++G F+PGT G + G G G GF INI W
Sbjct: 305 WDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRS 364
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
+ M D +Y+ AF I+ PV EFDP +++VS+GFDAA G +G ++PA +GYM
Sbjct: 365 S---GMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDV--IGACHVTPAGYGYM 419
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T L +A GK+ + LEGGY+L S+ SA A + L+G+ PP + +T P +A+E
Sbjct: 420 THTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGE--PP--ENTITLRPQAEAIEV 475
Query: 711 LQKTIAIQVSHWPVLK 726
+ + I IQ ++ L+
Sbjct: 476 VDEVIKIQSKYFKSLR 491
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 417 (151.9 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 88/212 (41%), Positives = 124/212 (58%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S HR++ G+F+P G G G GF +N+ W+
Sbjct: 171 WDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+YLAAF +++P+A EFDP++VLVSAGFD+A G P G + +P CF ++
Sbjct: 231 V---GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPE--GQMQATPECFAHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G++ LEGGY L S+ S V+ LLGD PPL + PC A+E+
Sbjct: 286 TQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMV---PCQSALES 342
Query: 711 LQKTIAIQVSHWPVLKRSAHTITWSALSAAED 742
+Q Q +W L+++ + S+ + E+
Sbjct: 343 IQSVQTAQTPYWTSLQQNVAPVLSSSTHSPEE 374
Score = 48 (22.0 bits), Expect = 6.8e-37, Sum P(2) = 6.8e-37
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 334 DMVLLYELKQALDNYQFELQSLKHQYEAV--HPGETF 368
+ + L + Q LD EL +L QY AV HP +TF
Sbjct: 67 EYIALVQKTQTLDKE--ELHALSKQYNAVYFHP-DTF 100
Score = 37 (18.1 bits), Expect = 9.7e-36, Sum P(2) = 9.7e-36
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 75 KHTKAKLGMRKVRPWKW 91
KH K K G++++ W
Sbjct: 155 KHAKQKYGLQRILIVDW 171
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 403 (146.9 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 84/197 (42%), Positives = 119/197 (60%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WD+HHG GTQ IF D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 171 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+Y+AAF +++P+A EF+ ++VLVSAGFD+A G G + +P CF ++
Sbjct: 231 V---GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSE--GQMQATPECFAHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G+V LEGGY L S+ S V+ALLGD PPLS + L+++++
Sbjct: 286 TQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQS 345
Query: 711 LQKTIAIQVSHWPVLKR 727
++ A Q HW L++
Sbjct: 346 VR---AAQAPHWMSLRQ 359
Score = 50 (22.7 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 295 RPRSLDTSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRS-DMVLLYELKQALDNYQFELQ 353
RP L T+++ + L L + E + S + V L QAL ELQ
Sbjct: 27 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTE--ELQ 84
Query: 354 SLKHQYEAV--HPGETF 368
+L Q++AV HP TF
Sbjct: 85 ALSRQFDAVYFHPS-TF 100
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 403 (146.9 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 84/197 (42%), Positives = 119/197 (60%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WD+HHG GTQ IF D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 173 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 232
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+Y+AAF +++P+A EF+ ++VLVSAGFD+A G G + +P CF ++
Sbjct: 233 V---GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSE--GQMQATPECFAHL 287
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
TQ L LA G+V LEGGY L S+ S V+ALLGD PPLS + L+++++
Sbjct: 288 TQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQS 347
Query: 711 LQKTIAIQVSHWPVLKR 727
++ A Q HW L++
Sbjct: 348 VR---AAQAPHWMSLRQ 361
Score = 50 (22.7 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 295 RPRSLDTSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRS-DMVLLYELKQALDNYQFELQ 353
RP L T+++ + L L + E + S + V L QAL ELQ
Sbjct: 29 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTE--ELQ 86
Query: 354 SLKHQYEAV--HPGETF 368
+L Q++AV HP TF
Sbjct: 87 ALSRQFDAVYFHPS-TF 102
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 405 (147.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 90/197 (45%), Positives = 116/197 (58%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S HR++ G+F+P G G GLGF +N+ W+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+Y+AAF +++P+A EFDP++VLVSAGFD+A G P G +P CF ++
Sbjct: 231 V---GMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPE--GQMLATPECFAHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T L LA G+V LEGGY L S+ S VRALLGD PLS P A+E+
Sbjct: 286 THLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDPALPLSGP---MEPHGSALES 342
Query: 711 LQKTIAIQVSHWPVLKR 727
LQ A Q HW L++
Sbjct: 343 LQCVRAAQAPHWVSLQQ 359
Score = 47 (21.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 305 TTAFQTLIDLGLNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQF----ELQSLKHQYE 360
TTA + L GL + + +E +V E L Q ELQ+L +Y+
Sbjct: 32 TTALERLQQHGLKQRCLQLVAREASEAELGLVHSPEYVALLQGTQALGTRELQALSKEYD 91
Query: 361 AV--HPGETF 368
AV HP TF
Sbjct: 92 AVYLHPS-TF 100
>POMBASE|SPAC9G1.13c [details] [associations]
symbol:swc4 "Swr1 complex subunit Swc4" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0003677
"DNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IC] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IDA] [GO:0043486 "histone exchange" evidence=IPI]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043968
"histone H2A acetylation" evidence=IEA] InterPro:IPR001005
InterPro:IPR027109 SMART:SM00717 PomBase:SPAC9G1.13c EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006281
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0035267 GO:GO:0000812 PROSITE:PS51293 eggNOG:NOG298520
KO:K11324 PANTHER:PTHR12855 OMA:KFEMAAK OrthoDB:EOG4ZGSN8
PIR:T39236 RefSeq:NP_593568.2 STRING:O14308
EnsemblFungi:SPAC9G1.13c.1 GeneID:2542412 KEGG:spo:SPAC9G1.13c
NextBio:20803471 Uniprot:O14308
Length = 437
Score = 347 (127.2 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 85/222 (38%), Positives = 117/222 (52%)
Query: 34 QPNKYKKEKRPEGMAREVFALLCNDNRDAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLP 93
Q +K E+RPEG++RE+++LL ++ PL + +K K K+ K + W P
Sbjct: 21 QKSKTPTERRPEGISRELYSLL---GENSAPLAIYQ--KKFKE-KPKVS-HKAKNWVRQP 73
Query: 94 FSNPARKDNAVFHHW--RRVTDEGKEYPFARFNKQVSIPTYTDTEYLQELQSPTWTRAET 151
FS +RKD+ HHW + D Y F +FN + I YTD EY L+ W + ET
Sbjct: 74 FSISSRKDDFTLHHWVLKSEVDSEASYKFEKFNVPLFIIDYTDEEYQNYLKDEDWNKDET 133
Query: 152 DHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMRG--TECSGGN 209
D+LF LC +DLRF VI DRYD K+ RT+EDLK R+Y V + R +
Sbjct: 134 DYLFRLCKDYDLRFFVIADRYDNEKYKKHRTLEDLKDRFYSVSRKILLARNPINSMTAAQ 193
Query: 210 EPKLFDAEHEKK----RKEQLKRLFERTPEQVEEEQMLLAEL 247
L E+ K+ RK+ L L RTPE+V EE+ L EL
Sbjct: 194 SSLLNTMEYNKEQEVIRKKYLIGLASRTPEEVAEEEALFIEL 235
Score = 197 (74.4 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 57/159 (35%), Positives = 79/159 (49%)
Query: 339 YELKQALDNYQFELQSLKHQY--EAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSP 396
+ + D++ LK + EA + E F +P I + T D EY L+
Sbjct: 74 FSISSRKDDFTLHHWVLKSEVDSEASYKFEKFNVPLFIIDYT-------DEEYQNYLKDE 126
Query: 397 TWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC--YTLAK--- 451
W + ETD+LF LC +DLRF VI DRYD K+ RT+EDLK R+Y V LA+
Sbjct: 127 DWNKDETDYLFRLCKDYDLRFFVIADRYDNEKYKKHRTLEDLKDRFYSVSRKILLARNPI 186
Query: 452 --MRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQ 488
M + S N + ++ E E RK+ L L RTPE+
Sbjct: 187 NSMTAAQSSLLNTME-YNKEQEVIRKKYLIGLASRTPEE 224
Score = 71 (30.1 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 1 MTS-DIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDN 59
MTS DIRD+ EL P EI + Q +K E+RPEG++RE+++LL +N
Sbjct: 1 MTSADIRDVFELP---PPEIGNK-----------QKSKTPTERRPEGISRELYSLL-GEN 45
Query: 60 RDAP 63
AP
Sbjct: 46 -SAP 48
Score = 54 (24.1 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 282 KKMPPKRKLTHQIRPRSLDTSVKTTAFQTLIDLGLNP---IPTEEIVTHYNELRSDMVLL 338
+K+ P + Q P ++ S+ + +LG++ +PT + + EL++ +V L
Sbjct: 340 EKLHPGTFVRSQKIP-AIKASLSQRVSSVMTELGVSSRLIMPTAKNFEKFVELQNSIVSL 398
Query: 339 YELKQALDNYQFELQ 353
ELK+ +D E +
Sbjct: 399 LELKRKVDRLSQETE 413
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 389 (142.0 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 83/192 (43%), Positives = 116/192 (60%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTG-GPIEC-GTGAGLGFNINIAWSG 590
WDVHHG GTQ IF D+ VLY S HR++ F+P + G G G GFNIN+ W+
Sbjct: 173 WDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNK 232
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+++YLAAF +++PVA EFDP++VLVS+G+D+ G P G +P F ++
Sbjct: 233 V---GMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPE--GQMNATPEVFAHL 287
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK+ + LEGGY L S+ +S V+ LL D P ++ E +PCL A+E+
Sbjct: 288 THFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGE---MAPCLSAIES 344
Query: 711 LQKTIAIQVSHW 722
+Q A +W
Sbjct: 345 IQNVRAAHKPYW 356
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 375 (137.1 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 85/203 (41%), Positives = 116/203 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGT--GGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q F D VLY S HR++ +F+P G G G GFNIN+ W+
Sbjct: 226 WDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNK 285
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
M +++YLAAF +++PVA EFDP++V+VSAGFD+A G P G P F ++
Sbjct: 286 V---GMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPE--GEMCALPEIFAHL 340
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVET 710
T LM LA GK+ + LEGGY+L S+ S V +LLGD P +S + C A+E+
Sbjct: 341 THLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISG---LGTACDSALES 397
Query: 711 LQKTIAIQVSHWPVLKRSAHTIT 733
+Q +Q S+W K A + T
Sbjct: 398 IQNVRNVQSSYWSSFKHLAQSET 420
>UNIPROTKB|Q5TG36 [details] [associations]
symbol:DMAP1 "DNA methyltransferase 1-associated protein 1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0035267 "NuA4
histone acetyltransferase complex" evidence=IEA] [GO:0043967
"histone H4 acetylation" evidence=IEA] [GO:0043968 "histone H2A
acetylation" evidence=IEA] InterPro:IPR027109 GO:GO:0008168
EMBL:AL035417 UniGene:Hs.8008 HGNC:HGNC:18291 PANTHER:PTHR12855
IPI:IPI00644814 STRING:Q5TG36 Ensembl:ENST00000436069
HOGENOM:HOG000198262 HOVERGEN:HBG103379 Uniprot:Q5TG36
Length = 151
Score = 266 (98.7 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 43/59 (72%), Positives = 52/59 (88%)
Query: 61 DAPPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYP 119
DAPPLLP+D+GQGY+ KAKLG +KVRPWKW+PF+NPARKD A+F HWRR +EGK+YP
Sbjct: 93 DAPPLLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYP 151
Score = 113 (44.8 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 3 SDIRDILEL---ERDAPA-EITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCND 58
+D+RDILEL E DA + I+++ II DK + + ++ KRPEGM REV+ALL +D
Sbjct: 5 ADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSD 64
Query: 59 NRDAPPLL 66
LL
Sbjct: 65 KNKGSCLL 72
>UNIPROTKB|G3MZV1 [details] [associations]
symbol:G3MZV1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR027109 PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 EMBL:DAAA02060349
Ensembl:ENSBTAT00000064920 OMA:STNPACK Uniprot:G3MZV1
Length = 206
Score = 332 (121.9 bits), Expect = 4.5e-29, P = 4.5e-29
Identities = 82/213 (38%), Positives = 120/213 (56%)
Query: 15 APAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDAPPLLPTDSGQGY 74
A I+++ II DK + + + ++ + EV+ +D +D+ LL +D GQG+
Sbjct: 1 ASGTISKKQIIKPDKKKSKKSYEVLAFQKSADVHPEVYRC-SSDKKDS--LLSSD-GQGH 56
Query: 75 KHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHWRRVTDEGKEYPFARFNKQVSIPTYTD 134
+ +AKLG +K PWKW+P +NPA KD A FH WR+ +EGK P F+K V +P +++
Sbjct: 57 RTVRAKLGTKKTWPWKWMPSTNPACKDGAFFH-WRQAAEEGKAVPLPTFDKTV-VPVHSE 114
Query: 135 TEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC 194
EY L T T AET HLFDL F L F++ H +D + T +EDLK+RYY V
Sbjct: 115 QEYQLWLHQDTQTEAETGHLFDLSRCFGLPFVIRH-AWDDRQQLTEPPVEDLKERYYRVW 173
Query: 195 HTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLK 227
R + + P +FDA H ++ KEQLK
Sbjct: 174 P-----RSGQRTDLGVP-VFDAWHWRRWKEQLK 200
Score = 144 (55.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 45/123 (36%), Positives = 64/123 (52%)
Query: 357 HQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETDHLFDLCHRFDLR 416
H +A G+ +P F+ T + + + EY L T T AET HLFDL F L
Sbjct: 88 HWRQAAEEGKAVPLPT--FDKTVVPVH-SEQEYQLWLHQDTQTEAETGHLFDLSRCFGLP 144
Query: 417 FIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRKE 476
F++ H +D + T +EDLK+RYY V + + R T+ P +FDA H ++ KE
Sbjct: 145 FVIRH-AWDDRQQLTEPPVEDLKERYYRV-WPRSGQR-TDLG---VP-VFDAWHWRRWKE 197
Query: 477 QLK 479
QLK
Sbjct: 198 QLK 200
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 336 (123.3 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 77/178 (43%), Positives = 101/178 (56%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q IF D VLY S HR++ GNF+P G G G GF +N+ W+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYM 650
MG+A+YLAAF +++P+A EFDP++VLVSAGFD+A G P G + +P CF ++
Sbjct: 231 V---GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPE--GQMQATPECFAHL 285
Query: 651 TQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQ---EELTRSPCL 705
TQ L LA G++ LE P DS + + D PP S E + SPCL
Sbjct: 286 TQLLQVLAGGRICAVLECPGVYPECSDSPDPSL-----DKPPTNSTCTVAEDSLSPCL 338
Score = 50 (22.7 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 334 DMVLLYELKQALDNYQFELQSLKHQYEAV--HPGETF 368
+ + L + Q LD EL +L QY+AV HP +TF
Sbjct: 67 EYIALVQKTQTLDKE--ELHTLSKQYDAVYFHP-DTF 100
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 303 (111.7 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 51/72 (70%), Positives = 61/72 (84%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E GTG G G+NINIAW+G L+
Sbjct: 51 DVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 110
Query: 594 PPMGDAEYLAAF 605
PPMGD EYL AF
Sbjct: 111 PPMGDIEYLEAF 122
Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + GTG G G+NINIAW+G L+PPMGD EYL +
Sbjct: 88 PNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEA 121
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 312 (114.9 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 52/76 (68%), Positives = 64/76 (84%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHGNGTQQ FY+D +LY+S+HR+D+GNFFPG+G P E GTG G G+NINIAW+G L+
Sbjct: 820 DVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 879
Query: 594 PPMGDAEYLAAFRTIV 609
PPMGD EYL AFR ++
Sbjct: 880 PPMGDIEYLEAFRLVL 895
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 486 PEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
P + GTG G G+NINIAW+G L+PPMGD EYL +
Sbjct: 857 PNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEA 890
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 297 (109.6 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 68/162 (41%), Positives = 92/162 (56%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WD+HHG GTQ IF D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 127 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 186
Query: 591 ALNPPMGDAEYLAAF-RTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGY 649
MG+A+Y+ AF + +++P+A EF+ ++VLVSAGFD+A G G + +P CF +
Sbjct: 187 V---GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSE--GQMQATPECFAH 241
Query: 650 MTQQLMTLADGKVVLALE----GGYDL-PSMCDSAEACVRAL 686
+TQ L LA G+V LE G D P E C AL
Sbjct: 242 LTQLLQVLAGGRVCAVLEVIAAGREDAGPEAEGQREGCEGAL 283
Score = 55 (24.4 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 689 DAPPPLSQEELTRSPCLKAVETLQKTIAIQVSHWPVLKRSA 729
DA P + E R C A++++Q A Q HW L++ A
Sbjct: 267 DAGP---EAEGQREGCEGALQSIQSVRAAQAPHWMSLRQQA 304
Score = 43 (20.2 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 351 ELQSLKHQYEAV--HPGETF 368
ELQ+L Q++AV HP TF
Sbjct: 38 ELQALSRQFDAVYFHPS-TF 56
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 305 (112.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 73/202 (36%), Positives = 106/202 (52%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WD+HHG GTQ IF D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 141 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 200
Query: 591 ALNPPMGDAEYLAAF-RTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGY 649
MG+A+Y+ AF + +++P+A EF+ ++VLVSAGFD+A G G + +P CF +
Sbjct: 201 V---GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSE--GQMQATPECFAH 255
Query: 650 MTQQLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVE 709
+TQ L LA G+V LE + A DA P + P A++
Sbjct: 256 LTQLLQVLAGGRVCAVLE--------------VIAAGREDAGPEAEGQREGMVPHGSALQ 301
Query: 710 TLQKTIAIQVSHWPVLKRSAHT 731
++Q A Q HW L++ +
Sbjct: 302 SIQSVRAAQAPHWMSLRQQGRS 323
Score = 43 (20.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 351 ELQSLKHQYEAV--HPGETF 368
ELQ+L Q++AV HP TF
Sbjct: 52 ELQALSRQFDAVYFHPS-TF 70
>UNIPROTKB|H0YHJ5 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000547259 Uniprot:H0YHJ5
Length = 110
Score = 280 (103.6 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 55/78 (70%), Positives = 63/78 (80%)
Query: 620 IVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLALEGGYDLPSMCDSA 679
+VLVSAGFDAA GHP PLGGY +S CFGYMTQQLM LA G VVLALEGG+DL ++CD++
Sbjct: 3 LVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDAS 62
Query: 680 EACVRALLGDA----PPP 693
EACV ALLG+ PPP
Sbjct: 63 EACVAALLGNRVSRLPPP 80
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 267 (99.0 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 67/174 (38%), Positives = 94/174 (54%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGT+ I+Y VL +SIH+ D + TG + G GAGLGFN+NI L
Sbjct: 179 WDVHHGNGTEAIYYERDDVLTISIHQ--DRCYPHDTGSIDDQGKGAGLGFNMNIP----L 232
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G Y+ A +++P K FD +V+++ GFDA G PL S F MT+
Sbjct: 233 PPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDA--GGFDPLARMMCSAETFREMTR 290
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGD---APPPLSQEELTRSP 703
++M ++DGK+V A EGGY + A + + G A PL+Q + + P
Sbjct: 291 RVMQVSDGKLVAAHEGGYSELYVPFCGHAMLEEMSGSTIHAADPLAQRVMGQQP 344
>SGD|S000003234 [details] [associations]
symbol:SWC4 "Component of the Swr1p complex that incorporates
Htz1p into chromatin" species:4932 "Saccharomyces cerevisiae"
[GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0035267 "NuA4 histone acetyltransferase
complex" evidence=IEA;IPI] [GO:0000123 "histone acetyltransferase
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IDA;IPI] [GO:0043486 "histone exchange" evidence=IPI]
[GO:0000812 "Swr1 complex" evidence=IDA] [GO:0051276 "chromosome
organization" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA;IPI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0034087 "establishment of mitotic sister chromatid cohesion"
evidence=IMP] [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IPI] InterPro:IPR001005
InterPro:IPR009057 InterPro:IPR027109 SMART:SM00717 SGD:S000003234
GO:GO:0006355 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0000812 PROSITE:PS51293 GO:GO:0043486
GO:GO:0034087 eggNOG:NOG298520 KO:K11324 PANTHER:PTHR12855
GeneTree:ENSGT00390000016466 OMA:KFEMAAK OrthoDB:EOG4ZGSN8
EMBL:Z72787 EMBL:AY692656 PIR:S64291 RefSeq:NP_011516.1
ProteinModelPortal:P53201 DIP:DIP-6510N IntAct:P53201
MINT:MINT-675383 STRING:P53201 PaxDb:P53201 PeptideAtlas:P53201
EnsemblFungi:YGR002C GeneID:852885 KEGG:sce:YGR002C CYGD:YGR002c
HOGENOM:HOG000246708 NextBio:972538 Genevestigator:P53201
GermOnline:YGR002C Uniprot:P53201
Length = 476
Score = 187 (70.9 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 41/106 (38%), Positives = 64/106 (60%)
Query: 145 TWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCHTLAKMRGTE 204
+W+ E ++LF+LC ++DLR+ +I DRY N SRT+EDLK+++Y+ C K
Sbjct: 163 SWSFEEIEYLFNLCKKYDLRWFLIFDRYSYNN---SRTLEDLKEKFYYTCRNYFK----- 214
Query: 205 CSGGNEPKL----FDAEHEKKRKEQLKRLFERTPEQVEEEQMLLAE 246
S + P L F AE E +RK+ L+RL R+ ++ EE+ L+ E
Sbjct: 215 ASDPSNPLLSSLNFSAEKEIERKKYLQRLLSRSAAEIAEEEALVVE 260
Score = 163 (62.4 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 347 NYQFELQSL-KHQYEA-VHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQSPTWTRAETD 404
N + S K +YEA ++ E Q K E + N T ++ +W+ E +
Sbjct: 115 NQHLSIPSFTKEEYEAFMNENEGTQ---KSVE-SEKNHNENFTNEKKDESKNSWSFEEIE 170
Query: 405 HLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVCYTLAKMRGTECSGGNEPK 464
+LF+LC ++DLR+ +I DRY N SRT+EDLK+++Y+ C K S + P
Sbjct: 171 YLFNLCKKYDLRWFLIFDRYSYNN---SRTLEDLKEKFYYTCRNYFK-----ASDPSNPL 222
Query: 465 L----FDAEHEKKRKEQLKRLFERT 485
L F AE E +RK+ L+RL R+
Sbjct: 223 LSSLNFSAEKEIERKKYLQRLLSRS 247
Score = 130 (50.8 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 42/142 (29%), Positives = 73/142 (51%)
Query: 2 TSDIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRD 61
+SDI D+L +++ + + + V N+ K + GM RE+F LL +N+
Sbjct: 3 SSDIFDVLNIKQKSRSPTNGQ----VSVPSSSAANRPKPQVT--GMQRELFNLL-GENQ- 54
Query: 62 APPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAV-FHHWRR-----VTDEG 115
PP++ SG +K + L K PW ++ F + +N+V HW + + D
Sbjct: 55 -PPVV-IKSGNNFK--EKMLSTSKPSPWSFVEF----KANNSVTLRHWVKGSKELIGDTP 106
Query: 116 KEYPFARFNKQVSIPTYTDTEY 137
KE P+++FN+ +SIP++T EY
Sbjct: 107 KESPYSKFNQHLSIPSFTKEEY 128
Score = 55 (24.4 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 272 DMQADNRKTDKKMPPKRKLTHQIRPRSLDTSVKTTAFQTLI-----DLGL--NPI-PTEE 323
D +D RK + KL+ + RS S A Q I +L L P+ P+ +
Sbjct: 384 DFNSDERKALGVITHGEKLSPGVYLRSTKLSTFKPALQNKILAILQELSLPSRPVMPSFD 443
Query: 324 IVTHYNELRSDMVLLYELKQALDNYQ 349
++ EL + L +LK+ +D Y+
Sbjct: 444 VMERQEELLKKINTLIDLKKHVDKYE 469
Score = 41 (19.5 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 186 LKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEEQML 243
+KQ+ F H + + S E + K+++++++ +R E EQ+L
Sbjct: 327 MKQQQQFAQHRQLQQLNVKKSEVKEN--LSPKKTKRQRQEMQTALKRKSESAYAEQLL 382
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 255 (94.8 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 63/160 (39%), Positives = 86/160 (53%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQ IFY + VL +SIH+ + F PG+G E G GAG G N+N+ L
Sbjct: 156 WDVHHGNGTQDIFYEREDVLTISIHQ--ENCFPPGSGSGSERGAGAGEGANLNVN----L 209
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G Y+ A +V+P F P++++V+ G DA + PL FGY+T+
Sbjct: 210 LPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDA--NNFDPLSRMTAHSGTFGYLTR 267
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLG 688
+M A+ G++V A EGGY + A VR L G
Sbjct: 268 AVMGAANDLCGGRLVCAHEGGYAEAVVPFCAHEVVRTLAG 307
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 265 (98.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 70/160 (43%), Positives = 88/160 (55%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGTQ IF VL LS+H+ DG F PG GG + G GAGLG NINI L
Sbjct: 184 WDVHHGNGTQSIFEERADVLTLSLHQ--DGCFPPGYGGEQDRGRGAGLGCNINIP----L 237
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G YL A + IV+P + F+P++++V+ G+DA A PL L F MTQ
Sbjct: 238 LPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANA--VDPLARMLLHSDSFREMTQ 295
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLG 688
L A+ G++VL EGGY + A + AL G
Sbjct: 296 CLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSG 335
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 246 (91.7 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 69/184 (37%), Positives = 97/184 (52%)
Query: 508 NPPMGDAEYLSSDGREKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPG 567
N + A L++ G ++ F DVHHGNGTQ F + +VLY+S H++ ++PG
Sbjct: 139 NIAIAAAHALANHGLQRIAIVDF---DVHHGNGTQAAFRRNPQVLYVSTHQYP---WYPG 192
Query: 568 TGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGF 627
TG E G G L +NI + A Y A +P F P++VL+SAGF
Sbjct: 193 TGSAEETGVG-NL---VNIPLPAGTD----SAAYREAVTATALPAIDRFRPELVLISAGF 244
Query: 628 DAAAGHPPPLGGYKLSPACFGYMTQQLMTLAD----GKVVLALEGGYDLPSMCDSAEACV 683
DA PL L+ +G++T +LM LAD G++V ALEGGY L ++ SA A +
Sbjct: 245 DAH--RDDPLADLALTEDDYGWITAELMKLADRHSGGRIVSALEGGYALEALGRSAAAHL 302
Query: 684 RALL 687
R LL
Sbjct: 303 RTLL 306
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 247 (92.0 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGT+ +F D VL +S+H+ N FP G I GAG NIN+ L
Sbjct: 184 WDVHHGNGTEAVFLDDPGVLTISLHQD---NLFPLDSGGIGV-KGAG-NSNINVP----L 234
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G Y AF IV+P F P+++++ G+DA+A PLG LS F +MT+
Sbjct: 235 PPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASA--VDPLGVCMLSSEDFRWMTR 292
Query: 653 QLMTLAD----GKVVLALEGGY 670
Q+MTLAD G++V+ EGGY
Sbjct: 293 QVMTLADKHCQGRIVVTHEGGY 314
Score = 45 (20.9 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 362 VHPGETFQIPE------KIFEPTSL---LSNLGDTEYLQELQSPTWTRAETDHLFDLCHR 412
V P E F+ PE + + T L LS+L E+ ++ DHL +C R
Sbjct: 38 VQPAEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCER 97
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 247 (92.0 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 61/142 (42%), Positives = 81/142 (57%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
WDVHHGNGT+ +F D VL +S+H+ N FP G I GAG NIN+ L
Sbjct: 184 WDVHHGNGTEAVFLDDPGVLTISLHQD---NLFPLDSGGIGV-KGAG-NSNINVP----L 234
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G Y AF IV+P F P+++++ G+DA+A PLG LS F +MT+
Sbjct: 235 PPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASA--VDPLGVCMLSSEDFRWMTR 292
Query: 653 QLMTLAD----GKVVLALEGGY 670
Q+MTLAD G++V+ EGGY
Sbjct: 293 QVMTLADKHCQGRIVVTHEGGY 314
Score = 45 (20.9 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 362 VHPGETFQIPE------KIFEPTSL---LSNLGDTEYLQELQSPTWTRAETDHLFDLCHR 412
V P E F+ PE + + T L LS+L E+ ++ DHL +C R
Sbjct: 38 VQPAEHFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCER 97
>DICTYBASE|DDB_G0288747 [details] [associations]
symbol:DDB_G0288747 "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043968 "histone H2A
acetylation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR027109
SMART:SM00717 dictyBase:DDB_G0288747 GO:GO:0003682
EMBL:AAFI02000122 eggNOG:NOG298520 KO:K11324 PANTHER:PTHR12855
RefSeq:XP_636571.1 EnsemblProtists:DDB0233334 GeneID:8626785
KEGG:ddi:DDB_G0288747 InParanoid:Q54IH7 OMA:ERYYRIQ Uniprot:Q54IH7
Length = 1042
Score = 251 (93.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 81/263 (30%), Positives = 127/263 (48%)
Query: 3 SDIRDILELERDA---PAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDN 59
SD+RDIL A + T A+ + P + K+ P+ ++ L N
Sbjct: 2 SDVRDILVGVSSAVGNKVDNTSTAVESILTNSNTTPKRPPKDT-PKTTMEKLQQTLKNLE 60
Query: 60 RDAPPLLP-TDSGQGYKHTKAKLGMRKVRP-WKWLPFSNPARKDN--AVFHHWRRVTDEG 115
+ P T + G K RK++ W F N +R +N V +HW + T
Sbjct: 61 GETLTFAPSTLTKSGLKEK------RKIKTNWDRKGFRNNSRPNNDGLVLYHWVKSTANE 114
Query: 116 K----EYPFARFNKQVSIPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDR 171
K +Y F++FNK++ I Y + EY L+ W+R +TD L +LC R+D RFI+I DR
Sbjct: 115 KATSIDYKFSKFNKKMEILFYNEEEYDLYLRDEKWSREDTDQLLELCKRYDTRFIIIADR 174
Query: 172 YDTNKFP-----TSR-TIEDLKQRYYFVCHTLAKMRG-TECSGGNEPK---LFDAEHEKK 221
+ N TS+ T+E+LK+RYY + L ++R E P +F+ +E +
Sbjct: 175 FGENNINNNNNNTSKKTVEELKERYYRIQSKLIELRTKAEEDPFQNPLTTYIFNKVYETE 234
Query: 222 RKEQLKRLFERTPEQVEEEQMLL 244
RK Q +LF + E+V EE+ L+
Sbjct: 235 RKIQSDKLFHLSKEEVAEEEQLV 257
Score = 155 (59.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/113 (35%), Positives = 62/113 (54%)
Query: 386 DTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFP-----TSR-TIEDLK 439
+ EY L+ W+R +TD L +LC R+D RFI+I DR+ N TS+ T+E+LK
Sbjct: 137 EEEYDLYLRDEKWSREDTDQLLELCKRYDTRFIIIADRFGENNINNNNNNTSKKTVEELK 196
Query: 440 QRYYFVCYTLAKMRG-TECSGGNEPK---LFDAEHEKKRKEQLKRLFERTPEQ 488
+RYY + L ++R E P +F+ +E +RK Q +LF + E+
Sbjct: 197 ERYYRIQSKLIELRTKAEEDPFQNPLTTYIFNKVYETERKIQSDKLFHLSKEE 249
Score = 61 (26.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 310 TLIDLGLNPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQYE 360
TL DL + +YN+L+ D+++L +L++ ++ + LK Q E
Sbjct: 386 TLFDLHIGRPQNNFSKLYYNDLKEDILILLDLQKYFMEKRYHCEILKSQKE 436
Score = 37 (18.1 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 727 RSAHTITWSALSAAEDNETVSAMASLSMNKKH 758
+S++TI+ S+ N + S+ +S S+NKK+
Sbjct: 304 QSSNTIS----SSNSINSSSSSSSSSSLNKKN 331
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 250 (93.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 61/161 (37%), Positives = 85/161 (52%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
+DVHHGNGT F D + +LS H+ DG++ PGTG + G G G G +N+ G
Sbjct: 238 FDVHHGNGTNDAFTEDPDIFFLSTHQ--DGSY-PGTGKISDIGKGKGEGTTLNLPLPGG- 293
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
GD F I++P A+ F P I+LVSAG+DA PL + + A + + +
Sbjct: 294 ---SGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHV--LDPLANLQFTTATYYSLAK 348
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGD 689
+ LA G+ V LEGGY+L S+ S RALLG+
Sbjct: 349 DIKRLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGE 389
>CGD|CAL0005735 [details] [associations]
symbol:SWC4 species:5476 "Candida albicans" [GO:0035267 "NuA4
histone acetyltransferase complex" evidence=IPI] [GO:0010485 "H4
histone acetyltransferase activity" evidence=IC] [GO:0043967
"histone H4 acetylation" evidence=IC] [GO:0000812 "Swr1 complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0034087
"establishment of mitotic sister chromatid cohesion" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 InterPro:IPR027109 SMART:SM00717 CGD:CAL0005735
GO:GO:0006355 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 SUPFAM:SSF46689 GO:GO:0035267 GO:GO:0043967
PROSITE:PS51293 InterPro:IPR017877 eggNOG:NOG298520 KO:K11324
PANTHER:PTHR12855 EMBL:AACQ01000039 RefSeq:XP_718649.1
STRING:Q5AAJ7 PRIDE:Q5AAJ7 GeneID:3639679 KEGG:cal:CaO19.7492
Uniprot:Q5AAJ7
Length = 635
Score = 179 (68.1 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 146 WTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC-HTLAKMRGTE 204
WT ET HLF+LC F+L++ +IHDR+ P +RT EDLK+++Y +C L +
Sbjct: 307 WTYKETKHLFELCQAFELKWPIIHDRFPN---P-NRTAEDLKEQFYRICIKILENQKNKN 362
Query: 205 CSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEEQMLLAE 246
+ + K + E +RK+ L+ L +RTP ++ EE+ L+ E
Sbjct: 363 QALIDSLKAYCKPRELERKQYLENLLKRTPAEIAEEESLVIE 404
Score = 165 (63.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 54/181 (29%), Positives = 87/181 (48%)
Query: 320 PTEEIVTHYNELRSDMVL---LYELKQALDNYQFELQSLK-HQYEAVHPGETFQIPEKIF 375
PT E +E + D+VL E K + + E ++ + + E + ET + +K
Sbjct: 218 PTVEAKKETDEKKDDVVLKDNTNETKPVTETTKSETETTEQNNSEKTNENETNKTNDKDG 277
Query: 376 EPTSLLSNLGDTE----YLQELQSPT---WTRAETDHLFDLCHRFDLRFIVIHDRYDTNK 428
E S TE +E T WT ET HLF+LC F+L++ +IHDR+
Sbjct: 278 EGNLTKSKDSATEDQSNNKKENDEDTESEWTYKETKHLFELCQAFELKWPIIHDRFPN-- 335
Query: 429 FPTSRTIEDLKQRYYFVCYT-LAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPE 487
P +RT EDLK+++Y +C L + + + K + E +RK+ L+ L +RTP
Sbjct: 336 -P-NRTAEDLKEQFYRICIKILENQKNKNQALIDSLKAYCKPRELERKQYLENLLKRTPA 393
Query: 488 Q 488
+
Sbjct: 394 E 394
Score = 101 (40.6 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 37/146 (25%), Positives = 64/146 (43%)
Query: 3 SDIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDA 62
+DI D+L ++RD + ++ K + K+ GMARE++ L+ +
Sbjct: 4 NDILDVLNIQRDESNQPPKK------KQKSSSTPTLPDGKQLTGMARELYNLV---GPNT 54
Query: 63 PPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHW----------RRVT 112
PP+ + Y K K+ K PW +PF+ P K +HW +
Sbjct: 55 PPI--NLNSNSYTANKEKMKKFKPSPWTRMPFT-P--KQGIELNHWVKGSKELIEQQEFE 109
Query: 113 DEG--KEYPFARFNKQVSIPTYTDTE 136
++G K Y F ++N Q+ IP + D +
Sbjct: 110 EDGTPKPYFFEKYNVQLEIPEFVDED 135
Score = 67 (28.6 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 318 PI-PTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQ 358
PI PT + + Y+EL +V L ++K+A D + E++ +K Q
Sbjct: 591 PIMPTRKTMAKYDELIRSVVTLLDVKKAKDKLESEIKLIKSQ 632
Score = 50 (22.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 216 AEHEKKRKEQLKR-LFERTPEQVEEEQ 241
A EK+RKE+ KR L E+ +Q +++Q
Sbjct: 156 ARREKERKEREKRDLEEKKKKQQQQQQ 182
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 7/28 (25%), Positives = 21/28 (75%)
Query: 215 DAEHEKKRKEQLKRLFERTPE-QVEEEQ 241
D E +KK+++Q ++ ++ P+ Q+++++
Sbjct: 169 DLEEKKKKQQQQQQKSQQNPQNQIKDDE 196
>UNIPROTKB|Q5AAJ7 [details] [associations]
symbol:SWC4 "SWR1-complex protein 4" species:237561
"Candida albicans SC5314" [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IPI] [GO:0043967 "histone H4
acetylation" evidence=IC] [GO:0010485 "H4 histone acetyltransferase
activity" evidence=IC] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR027109 SMART:SM00717 CGD:CAL0005735 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0035267 GO:GO:0043967 PROSITE:PS51293
InterPro:IPR017877 eggNOG:NOG298520 KO:K11324 PANTHER:PTHR12855
EMBL:AACQ01000039 RefSeq:XP_718649.1 STRING:Q5AAJ7 PRIDE:Q5AAJ7
GeneID:3639679 KEGG:cal:CaO19.7492 Uniprot:Q5AAJ7
Length = 635
Score = 179 (68.1 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 146 WTRAETDHLFDLCHRFDLRFIVIHDRYDTNKFPTSRTIEDLKQRYYFVC-HTLAKMRGTE 204
WT ET HLF+LC F+L++ +IHDR+ P +RT EDLK+++Y +C L +
Sbjct: 307 WTYKETKHLFELCQAFELKWPIIHDRFPN---P-NRTAEDLKEQFYRICIKILENQKNKN 362
Query: 205 CSGGNEPKLFDAEHEKKRKEQLKRLFERTPEQVEEEQMLLAE 246
+ + K + E +RK+ L+ L +RTP ++ EE+ L+ E
Sbjct: 363 QALIDSLKAYCKPRELERKQYLENLLKRTPAEIAEEESLVIE 404
Score = 165 (63.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 54/181 (29%), Positives = 87/181 (48%)
Query: 320 PTEEIVTHYNELRSDMVL---LYELKQALDNYQFELQSLK-HQYEAVHPGETFQIPEKIF 375
PT E +E + D+VL E K + + E ++ + + E + ET + +K
Sbjct: 218 PTVEAKKETDEKKDDVVLKDNTNETKPVTETTKSETETTEQNNSEKTNENETNKTNDKDG 277
Query: 376 EPTSLLSNLGDTE----YLQELQSPT---WTRAETDHLFDLCHRFDLRFIVIHDRYDTNK 428
E S TE +E T WT ET HLF+LC F+L++ +IHDR+
Sbjct: 278 EGNLTKSKDSATEDQSNNKKENDEDTESEWTYKETKHLFELCQAFELKWPIIHDRFPN-- 335
Query: 429 FPTSRTIEDLKQRYYFVCYT-LAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFERTPE 487
P +RT EDLK+++Y +C L + + + K + E +RK+ L+ L +RTP
Sbjct: 336 -P-NRTAEDLKEQFYRICIKILENQKNKNQALIDSLKAYCKPRELERKQYLENLLKRTPA 393
Query: 488 Q 488
+
Sbjct: 394 E 394
Score = 101 (40.6 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 37/146 (25%), Positives = 64/146 (43%)
Query: 3 SDIRDILELERDAPAEITREAIIGVDKTRKMQPNKYKKEKRPEGMAREVFALLCNDNRDA 62
+DI D+L ++RD + ++ K + K+ GMARE++ L+ +
Sbjct: 4 NDILDVLNIQRDESNQPPKK------KQKSSSTPTLPDGKQLTGMARELYNLV---GPNT 54
Query: 63 PPLLPTDSGQGYKHTKAKLGMRKVRPWKWLPFSNPARKDNAVFHHW----------RRVT 112
PP+ + Y K K+ K PW +PF+ P K +HW +
Sbjct: 55 PPI--NLNSNSYTANKEKMKKFKPSPWTRMPFT-P--KQGIELNHWVKGSKELIEQQEFE 109
Query: 113 DEG--KEYPFARFNKQVSIPTYTDTE 136
++G K Y F ++N Q+ IP + D +
Sbjct: 110 EDGTPKPYFFEKYNVQLEIPEFVDED 135
Score = 67 (28.6 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 318 PI-PTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLKHQ 358
PI PT + + Y+EL +V L ++K+A D + E++ +K Q
Sbjct: 591 PIMPTRKTMAKYDELIRSVVTLLDVKKAKDKLESEIKLIKSQ 632
Score = 50 (22.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 216 AEHEKKRKEQLKR-LFERTPEQVEEEQ 241
A EK+RKE+ KR L E+ +Q +++Q
Sbjct: 156 ARREKERKEREKRDLEEKKKKQQQQQQ 182
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 7/28 (25%), Positives = 21/28 (75%)
Query: 215 DAEHEKKRKEQLKRLFERTPE-QVEEEQ 241
D E +KK+++Q ++ ++ P+ Q+++++
Sbjct: 169 DLEEKKKKQQQQQQKSQQNPQNQIKDDE 196
>ASPGD|ASPL0000078236 [details] [associations]
symbol:AN4445 species:162425 "Emericella nidulans"
[GO:0000812 "Swr1 complex" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR027109
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:1.10.10.60 PROSITE:PS51293 EMBL:BN001303 InterPro:IPR017877
EMBL:AACD01000077 eggNOG:NOG298520 KO:K11324 PANTHER:PTHR12855
RefSeq:XP_662049.1 ProteinModelPortal:Q5B4T5 PRIDE:Q5B4T5
EnsemblFungi:CADANIAT00006006 GeneID:2872244 KEGG:ani:AN4445.2
HOGENOM:HOG000188643 OMA:KFEMAAK OrthoDB:EOG4ZGSN8 Uniprot:Q5B4T5
Length = 586
Score = 234 (87.4 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 84/250 (33%), Positives = 125/250 (50%)
Query: 27 VDKTRKMQPNKYKK----EKRPEGMAREVFALLCNDNRDAPPLLPTDS---GQGYKHTKA 79
+D + QP +KK EKRPEG+ RE+FALL APP+ ++ G+ TKA
Sbjct: 10 LDLPAEGQPRPHKKQKVVEKRPEGITRELFALL---GERAPPIAINENRYKGRPKWQTKA 66
Query: 80 KLG--MRK----VRPWKWLPFSN--PARKDNAVFHHWRRVTDE---GKEYPFARFNKQVS 128
++ R +R W+ P S PA +D + + +EYPFA++N ++
Sbjct: 67 RVRPCARSDDLVLRHWQREPESTNIPAIEDTRAEGETKEQGEHKTADREYPFAKYNIKLK 126
Query: 129 IPT-YTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYD------TNKFPTS- 180
YT EY + L+S W+R ETD+L DL +DLR++VI DRYD N TS
Sbjct: 127 FSNRYTTDEYNRHLRSEDWSREETDYLMDLVEEYDLRWVVIADRYDFQPQRVDNTEETSS 186
Query: 181 --------RTIEDLKQRYYFVCHTLAKMRGTECSGGNEPKLFDAEHEKKRKEQLKRLFER 232
RT+E +K RYYFV ++ + S +E + FD HE+ K +R ER
Sbjct: 187 ALVPSKQFRTMEQMKARYYFVAASMLALEHPP-SEMSEAE-FDL-HERMMKFDPER--ER 241
Query: 233 TPEQVEEEQM 242
+++ Q+
Sbjct: 242 HRKELAALQL 251
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 388 EYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHDRYD------TNKFPTS--------- 432
EY + L+S W+R ETD+L DL +DLR++VI DRYD N TS
Sbjct: 135 EYNRHLRSEDWSREETDYLMDLVEEYDLRWVVIADRYDFQPQRVDNTEETSSALVPSKQF 194
Query: 433 RTIEDLKQRYYFVCYTLAKMRGTECSGGNEPKLFDAEHEKKRK 475
RT+E +K RYYFV ++ + S +E + FD HE+ K
Sbjct: 195 RTMEQMKARYYFVAASMLALEHPP-SEMSEAE-FDL-HERMMK 234
Score = 48 (22.0 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 319 IPTEEIVTHYNELRSDMVLLYELKQALDNYQFELQSLK 356
+PTE +V + +L + LL + ++ + + E++ L+
Sbjct: 445 MPTERVVKEFEKLIHSVNLLLDARKVAEKVESEIRVLE 482
Score = 46 (21.3 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 329 NELRSDMVLLYELKQALDNYQFELQSLKHQYEAVHPGETFQIPEKIFEPTSLLSNLGDTE 388
+E+R + VLL ELK+ N Q + + Y + +P + T+ ++ G +
Sbjct: 256 DEVREETVLLEELKRITANEQEFVTERRELYSRL------DVPISVSNATNYHNSQGLSH 309
Query: 389 YLQEL 393
LQ L
Sbjct: 310 LLQTL 314
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 13/64 (20%), Positives = 31/64 (48%)
Query: 222 RKEQLKRLFE-RTPEQVEEEQMLLAELXXXXXXXXXXXXXTQDLQKLMTAADMQADNRKT 280
R ++ ++L + ++ Q ++ LAEL ++ +KL+ + ++ D RK
Sbjct: 411 RSDRAQKLTQAKSHVQTQKLASALAELEVPLRLFMPTERVVKEFEKLIHSVNLLLDARKV 470
Query: 281 DKKM 284
+K+
Sbjct: 471 AEKV 474
Score = 41 (19.5 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 224 EQLKRLFERTPEQVEEEQMLLAELXX-XXXXXXXXXXXTQDLQKLMTAADMQADNRK 279
E+LKR+ E V E + L + L +Q L L+ +QAD K
Sbjct: 266 EELKRITANEQEFVTERRELYSRLDVPISVSNATNYHNSQGLSHLLQTL-LQADKSK 321
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 220 (82.5 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 56/159 (35%), Positives = 84/159 (52%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
+DVHHGNGTQ + + + R L ++ + +PG+G P E G + +NI L
Sbjct: 158 FDVHHGNGTQDLLWDEARALLITSQQMP---LWPGSGRPDEDGAHGQI---VNIP----L 207
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
P G AE AA+ P + F P+++++SAGFDA PL S A F ++T
Sbjct: 208 APGTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAH--QDDPLANLNWSTADFAWLTA 265
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALL 687
+L LA G++V LEGGYDL ++ + A V+ L+
Sbjct: 266 ELCALAQELCQGRIVSTLEGGYDLNALAAATRAHVQELI 304
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 228 (85.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 63/171 (36%), Positives = 95/171 (55%)
Query: 533 WDVHHGNGTQQIF--YSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSG 590
+DVH GNGTQ+ + V +SIHR+++G+F+P P + G IN+
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWPNM--P-QTGIYHNYKNTINLP--- 225
Query: 591 ALNP-PMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGY 649
LN + DA+Y A F I++P F P ++LVS+GFDA+ G P G +++PA G+
Sbjct: 226 -LNTIGLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPE--GSMQVTPA--GF 280
Query: 650 MTQQLMTLADGKVVLAL-EGGYDLPSMCDSAEACVRALLGDAPPPLSQEEL 699
T M + G V AL EGGY L ++ +E +RALLG+ P + E++
Sbjct: 281 ATMIRMLIDTGIPVAALLEGGYFLDALAADSEWVLRALLGEEIPRIRVEKI 331
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 218 (81.8 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 62/178 (34%), Positives = 91/178 (51%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
+DVHHGNG Q + +D RV Y+S H+ + FP TG E G + +NI L
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQI---HHFPFTGDSCEDGPFQNI---LNIP----L 209
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
GD+ Y F ++ P ++ P+++LV AG+DA +G LS F +T+
Sbjct: 210 PAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADD--MGEMCLSQQGFAGITR 267
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGDA-PPPLSQ--EELTRSP 703
L AD GK+V +LEGGY + +S A + LL +A PPP ++ EE +P
Sbjct: 268 ALKKTADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALPPPNTKAPEETADTP 325
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 218 (81.8 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 62/178 (34%), Positives = 91/178 (51%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGAL 592
+DVHHGNG Q + +D RV Y+S H+ + FP TG E G + +NI L
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQI---HHFPFTGDSCEDGPFQNI---LNIP----L 209
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
GD+ Y F ++ P ++ P+++LV AG+DA +G LS F +T+
Sbjct: 210 PAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADD--MGEMCLSQQGFAGITR 267
Query: 653 QLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGDA-PPPLSQ--EELTRSP 703
L AD GK+V +LEGGY + +S A + LL +A PPP ++ EE +P
Sbjct: 268 ALKKTADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALPPPNTKAPEETADTP 325
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 211 (79.3 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 56/158 (35%), Positives = 81/158 (51%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+GTQ IFY D VL++S+H+ D +PGTG E GT G IN+ L
Sbjct: 147 DVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYPGTGFIDEAGTPNAYGTTINLP----LP 201
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
P GD E L V+P+ +EF P+ ++ SAG D + PL ++ +G +T+
Sbjct: 202 PGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNH--YSDPLARMAVTARGYGRITEL 259
Query: 654 LMTLADGKVVLALEGGYDLPSMCDSAE-ACVRALLGDA 690
+ D + LEGGY + A + AL G++
Sbjct: 260 IKP--D---LAVLEGGYSIEGALPYVNLAILLALYGES 292
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 218 (81.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/164 (35%), Positives = 89/164 (54%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFF-PGTG---GPIECGTGAGLGFNINIAW 588
+DVHHGNGTQ+I D L++SIH D+ +F PGTG G I+ +G G +NI
Sbjct: 1255 FDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILNIG- 1313
Query: 589 SGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPP-PLGGYKLSPACF 647
L G A +L + ++P + + PQ++ +SAGFD GH P G KL+ +
Sbjct: 1314 ---LKRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFD---GHKDDPTNGLKLNEEDY 1367
Query: 648 GYMTQQLMTLA----DGKVVLALEGGYDLPSMCDSAEACVRALL 687
+T+ + T+A G+++ LEGGY + +S + CV + L
Sbjct: 1368 FVITKMIKTVAFKYCKGRIISVLEGGYGIEKT-NSLQRCVNSHL 1410
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 199 (75.1 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 53/150 (35%), Positives = 82/150 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGG-PIECGTGAGLGFNINIAWS-GA 591
D+HHG G Q+IFY VLY+S+H D NF+PG G E G GAG G+N+N+ + GA
Sbjct: 192 DMHHGQGIQEIFYERADVLYVSVHG-DPTNFYPGVAGFAEERGAGAGEGYNLNLPMAHGA 250
Query: 592 LNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMT 651
+ ++LA + V K FD +++++S GFD P ++ F +
Sbjct: 251 -----SEGDFLARLEQALEAV-KAFDAEVLVLSLGFDIY--ELDPQSKVAVTRDGFAILG 302
Query: 652 QQLMTLADGKVVLALEGGYDLPSMCDSAEA 681
Q++ +L +++ EGGY L S+ D+A A
Sbjct: 303 QRIRSLGLPCLIVQ-EGGYHLESLEDNARA 331
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/163 (32%), Positives = 83/163 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D HHG+G Q+ FY RVL +SIH + G FFPGTG E GTGAG G+++NI L
Sbjct: 170 DAHHGDGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEGETGTGAGTGYSVNIP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
DA ++ AF + P+ ++P +++ G D PL +++ + Y+ +
Sbjct: 224 VAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTF--RTDPLTRLEVTTHSYTYILR 281
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLG-DAPPPL 694
+L L V + GGY+L ++ + + G + PP L
Sbjct: 282 KLKALGIPWVAVG-GGGYNLVNVARAWTLAWGVMNGVELPPRL 323
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/163 (32%), Positives = 83/163 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D HHG+G Q+ FY RVL +SIH + G FFPGTG E GTGAG G+++NI L
Sbjct: 170 DAHHGDGVQEAFYDTDRVLTISIH--ESGMYFFPGTGFEGETGTGAGTGYSVNIP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
DA ++ AF + P+ ++P +++ G D PL +++ + Y+ +
Sbjct: 224 VAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTF--RTDPLTRLEVTTHSYTYILR 281
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLG-DAPPPL 694
+L L V + GGY+L ++ + + G + PP L
Sbjct: 282 KLKALGIPWVAVG-GGGYNLVNVARAWTLAWGVMNGVELPPRL 323
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 65/216 (30%), Positives = 102/216 (47%)
Query: 498 NINIAWSGALN-PPMGDAE---YLSSDGR---EKTQYFPFRCW---DVHHGNGTQQIFYS 547
+I I WSG L+ G+A Y++ ++FP + D+HHG+G QQ FY
Sbjct: 147 DIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYE 206
Query: 548 DKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRT 607
RVL +S H+++ G+FFP TG E G G F +N+ L +GD +Y + F++
Sbjct: 207 SDRVLTVSFHKYN-GDFFPATGNFDENGVKGGKYFALNVP----LEDGIGDEQYTSLFKS 261
Query: 608 IVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLALE 667
I+ P F P +++ G D+ G+ LG + LS G + + +V+
Sbjct: 262 IIEPTINTFQPSAIVLQCGADSL-GYDR-LGVFNLSIHAHGECVRFTRSFNIPMLVVG-G 318
Query: 668 GGYDLPSM----CDSAEACVRALLGDAPPPLSQEEL 699
GGY L ++ C CV + P L +E L
Sbjct: 319 GGYTLRNVARAWCYETSICVNEQI---PSELPRETL 351
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 188 (71.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 39/85 (45%), Positives = 50/85 (58%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGP--IECGTGAGLGFNINIAWSG 590
WDVHHG GTQ F D VLY SIHR++ G F+P G G G G+ IN+ W+
Sbjct: 197 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 256
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKE 615
M DA+Y+AAF +++PVA E
Sbjct: 257 V---GMRDADYIAAFLHVLLPVALE 278
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 193 (73.0 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 46/139 (33%), Positives = 74/139 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H+H G +FPGTG + G G+G + +N+ L
Sbjct: 175 DVHHGDGVEEAFYTTDRVMTVSFHKH--GEYFPGTGDLKDVGAGSGKYYALNVP----LR 228
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ D Y FRTI+ V F P+ V++ G D+ AG LG + L+ G +
Sbjct: 229 DGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDR--LGVFNLTTYGHGKCVEY 286
Query: 654 LMTLADGKVVLALEGGYDL 672
+ + + ++L GGY +
Sbjct: 287 MKSF-NVPLLLVGGGGYTI 304
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 182 (69.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIH-RHDD-GNFFPGTGGPIECGTGAGLGFNINIAWSGA 591
DVH+GNGT + FY+ +VL +S+H H G+ P G E G GLG+N+N+
Sbjct: 182 DVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVP---- 237
Query: 592 LNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMT 651
L GD Y A +V+P + F P +V++ G D++A P G L+ + +
Sbjct: 238 LPNGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPN--GRQSLTMNGYRRIG 295
Query: 652 QQLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGDAPPPLS 695
Q + +A+ G++++ EGGY + A + +L P LS
Sbjct: 296 QIMRGVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLS 343
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 190 (71.9 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 44/137 (32%), Positives = 74/137 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G Q+ FY+ RV+ +S H+++ G FFPGTG E G G+G + IN+ L
Sbjct: 203 DLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGTGSVDEVGIGSGKNYAINVP----LR 257
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ D Y+ F++I+ P+ +F P ++ G D+ G+ LG + L+ G +
Sbjct: 258 DGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSL-GYDR-LGCFNLNIRAHGECVKF 315
Query: 654 LMTLADGKVVLALEGGY 670
+ + +V+ GGY
Sbjct: 316 IKSFGIPMLVVG-GGGY 331
Score = 38 (18.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 347 NYQFELQSLKHQYEAVHPGETFQI 370
+Y + + + Y A+HP + F++
Sbjct: 38 SYHYNPEVSRFHYGALHPMKPFRL 61
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 190 (71.9 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 44/137 (32%), Positives = 74/137 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G Q+ FY+ RV+ +S H+++ G FFPGTG E G G+G + IN+ L
Sbjct: 203 DLHHGDGVQEAFYNTDRVMTVSFHKYN-GEFFPGTGSVDEVGIGSGKNYAINVP----LR 257
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ D Y+ F++I+ P+ +F P ++ G D+ G+ LG + L+ G +
Sbjct: 258 DGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSL-GYDR-LGCFNLNIRAHGECVKF 315
Query: 654 LMTLADGKVVLALEGGY 670
+ + +V+ GGY
Sbjct: 316 IKSFGIPMLVVG-GGGY 331
Score = 38 (18.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 347 NYQFELQSLKHQYEAVHPGETFQI 370
+Y + + + Y A+HP + F++
Sbjct: 38 SYHYNPEVSRFHYGALHPMKPFRL 61
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 180 (68.4 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 56/157 (35%), Positives = 75/157 (47%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPI-ECGTGAGLGFNINIAWSGAL 592
DVHHGNGTQ IFY VL +SIH D F+P G E G G GLG+N+N+ L
Sbjct: 193 DVHHGNGTQGIFYERDDVLTVSIHA-DPARFYPFFWGHAQERGAGRGLGYNLNLP----L 247
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
GD +YL + VA F ++++V+ G DA+ P G ++ F +
Sbjct: 248 ARGTGDDDYLDTLSVALRQVAS-FGSRVLVVALGLDASIDDP--FQGLAITQDGFARIGA 304
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDS-AEACVRALLG 688
L V+ EGGY +CDS + R L G
Sbjct: 305 ALAGTRV-PVLFVQEGGY----LCDSLGDTLTRVLTG 336
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 186 (70.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 498 NINIAWSGAL-----NPPMGDAEYLSS---DGREKTQYFPFRCW---DVHHGNGTQQIFY 546
+I I WSG L N P G Y++ +Y P + D+HHG+G Q+ FY
Sbjct: 148 DIAINWSGGLHHAKKNSPSGFC-YVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 547 SDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFR 606
+ RV LS H+++ G FFPGTG E G G F +N+ L + D Y+ F+
Sbjct: 207 TTDRVFTLSFHKYN-GEFFPGTGDLTEIGCDKGKHFALNVP----LEDGIDDDSYINLFK 261
Query: 607 TIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLAL 666
+IV P+ F P +++ G D+ GH LG + L+ G + + + G +L +
Sbjct: 262 SIVDPLIMTFKPTLIVQQCGADSL-GHDR-LGCFNLNIKAHGECVKFVKSF--GLPMLVV 317
Query: 667 EGG 669
GG
Sbjct: 318 GGG 320
Score = 42 (19.8 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 26/105 (24%), Positives = 43/105 (40%)
Query: 338 LYELKQALD---NYQFELQSLKHQYEAVHPGETFQIPEKIFEPTSLLSNLGDTEYLQELQ 394
L+E A +Y F + + Y HP + F ++ L+S+ G L ++
Sbjct: 17 LFEFNSAYSPRVSYHFNSKVSHYHYGVKHPMKPF----RLMLTDHLVSSYG----LHKIM 68
Query: 395 SPTWTRAET-DHLFDLCHRFD-LRFIVIHDRYDTNKFPTSRTIED 437
TR+ T D L H D + F+ + NK P T+E+
Sbjct: 69 DLYETRSATRDELLQF-HSEDYVNFLSKVSPENANKLPRG-TLEN 111
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 180 (68.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 51/138 (36%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D HHGNGTQ IFY VL+ SIH H + F G ECG GAG GFN N +
Sbjct: 195 DYHHGNGTQSIFYERSDVLFTSIHGHPEAEFPFFLGYADECGEGAGEGFNFNYPLAAGSG 254
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
DA + AA + + +D I++VS G D P + +KL + M ++
Sbjct: 255 ---WDA-WSAALEQACNEIQR-YDADIIVVSLGVDTFKDDP--ISQFKLDSPDYLAMGKR 307
Query: 654 LMTLADGKVVL-ALEGGY 670
+ L GK L +EGGY
Sbjct: 308 IAAL--GKPTLFVMEGGY 323
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G Q+ F + RV+ +S HR G +FPG+G ++ G G G F IN+ A+
Sbjct: 197 DIHHGDGVQEAFNNSDRVMTVSFHRF--GQYFPGSGSIMDKGVGPGKYFAINVPLMAAIR 254
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D YL F +++ V + F+P+ +++ G D+ LG + LS +
Sbjct: 255 ----DEPYLKLFESVISGVEENFNPEAIVLQCGSDSLC--EDRLGQFALSFNAHARAVKY 308
Query: 654 LMTLADGKVVLALEGG-YDLPSM--CDSAEACVRALLG 688
+ +L GK ++ L GG Y L ++ C + E V +LG
Sbjct: 309 VKSL--GKPLMVLGGGGYTLRNVARCWALETGV--ILG 342
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 87 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ 145
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y +++ V + F+P+ V++ G D AG P + + ++P C Y
Sbjct: 146 ----DEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 199
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 200 ILQWQLATLILGG------GGYNL 217
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ S H++ G FFPGTG + G GAG + +N+ L
Sbjct: 186 DVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGELRDIGVGAGKNYAVNVP----LR 239
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ DA Y + F ++ + + + P V++ G D+ +G LG + LS
Sbjct: 240 DGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDR--LGCFNLS 287
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 179 (68.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 39/110 (35%), Positives = 63/110 (57%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H++ G+FFPGTG + G G G +++N+ L
Sbjct: 180 DVHHGDGVEEAFYTTDRVMTVSFHKY--GDFFPGTGDLKDIGAGKGKLYSVNVP----LR 233
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y + F+ I+ V + FDP V++ G D+ G LG + L+
Sbjct: 234 DGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDR--LGPFNLT 281
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 179 (68.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 39/110 (35%), Positives = 63/110 (57%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H++ G+FFPGTG + G G G +++N+ L
Sbjct: 180 DVHHGDGVEEAFYTTDRVMTVSFHKY--GDFFPGTGDLKDIGAGKGKLYSVNVP----LR 233
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y + F+ I+ V + FDP V++ G D+ G LG + L+
Sbjct: 234 DGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDR--LGPFNLT 281
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 188 (71.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 44/114 (38%), Positives = 59/114 (51%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP--GTGGPIECGTGAGLGFNINIAWSG 590
WDVHHG G Q +F D VLY S HR++ G F+P G G GLGF +N+ W+
Sbjct: 171 WDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 591 ALNPPMGDAEYLAAFRTIVMPVAKE----FDPQIVLVSAGFDAAAGHP-PPLGG 639
MG+A+Y+AAF +++P+A E + V G P PPL G
Sbjct: 231 V---GMGNADYVAAFLHLLLPLAFEGGYHLESLAESVCMTVQTLLGDPAPPLSG 281
Score = 127 (49.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 664 LALEGGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQKTIAIQVSHWP 723
LA EGGY L S+ +S V+ LLGD PPLS +PC A+E++Q A Q HW
Sbjct: 249 LAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGP---MAPCQSALESIQSARAAQAPHWK 305
Query: 724 VLKR 727
L++
Sbjct: 306 SLQQ 309
Score = 68 (29.0 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 481 LFERTPEQCGTGAGLGFNINIAWSGALNPPMGDAEYLSS 519
L E + G G GLGF +N+ W+ MG+A+Y+++
Sbjct: 206 LRESDADAVGRGQGLGFTVNLPWNQV---GMGNADYVAA 241
Score = 40 (19.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 351 ELQSLKHQYEAV--HPGETF 368
ELQ+L Q++A+ HP TF
Sbjct: 82 ELQALSGQFDAIYFHPS-TF 100
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 178 (67.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 51/158 (32%), Positives = 77/158 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIEC-GTGAGLGFNINIAWSGAL 592
DVHHG+G +Q F+S RVL +S H++D NFFPGTG P++ G L + A + L
Sbjct: 210 DVHHGDGVEQAFWSTDRVLTVSFHKYDKENFFPGTG-PLDSTGPTHPLNPGAHHAVNVPL 268
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ + D Y+ F+ +V +F P +++ G D+ LG + L+ A G
Sbjct: 269 HDGIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDR--LGCFNLNVAAHGACVA 326
Query: 653 QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGDA 690
T G +L + GG P A A ++L DA
Sbjct: 327 YTKTF--GLPMLVVGGGGYTPRNVSRAWAHETSILIDA 362
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 176 (67.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/140 (32%), Positives = 70/140 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
DVHHG+G Q+ FY RV+ S H++ GN FFPGTG E G +G +++N+ L
Sbjct: 175 DVHHGDGVQEAFYLTDRVMTASFHKY--GNYFFPGTGDMYEIGAESGRYYSVNVP----L 228
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ I+ + + P +++ G D+ AG LG + LS G +
Sbjct: 229 KEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAGDR--LGCFSLSTKGHGECVK 286
Query: 653 QLMTLADGKVVLALEGGYDL 672
+ L +V+ GGY L
Sbjct: 287 FVKELNVPTLVVG-GGGYTL 305
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 174 (66.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVTDIGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y T++ V F+P+ V++ G D AG P + + ++P C Y
Sbjct: 237 ----DEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDP--MCSFNMTPEGVGKCLKY 290
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 291 VLQWQLATLILGG------GGYNL 308
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 53/153 (34%), Positives = 72/153 (47%)
Query: 522 REKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNF-FPGTGGPIECGTGAGL 580
REK + D HHG+G Q +FYSD VL +SIH + G + FPGTG E G GA
Sbjct: 156 REKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSITELGEGAAY 213
Query: 581 GFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHP-PPLGG 639
G INI L P D +L A IV + ++F P I++ G D+ P L
Sbjct: 214 GTKINIP----LEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLAN 269
Query: 640 YKLSPACFGYMTQQLM-TLADGKVVLALEGGYD 671
L+ + +L + G+ + GGYD
Sbjct: 270 TTLAFQESAKLLHELAHEVCGGRWLAGGGGGYD 302
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 53/153 (34%), Positives = 72/153 (47%)
Query: 522 REKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNF-FPGTGGPIECGTGAGL 580
REK + D HHG+G Q +FYSD VL +SIH + G + FPGTG E G GA
Sbjct: 156 REKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISIH--ETGRYLFPGTGSITELGEGAAY 213
Query: 581 GFNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHP-PPLGG 639
G INI L P D +L A IV + ++F P I++ G D+ P L
Sbjct: 214 GTKINIP----LEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLAN 269
Query: 640 YKLSPACFGYMTQQLM-TLADGKVVLALEGGYD 671
L+ + +L + G+ + GGYD
Sbjct: 270 TTLAFQESAKLLHELAHEVCGGRWLAGGGGGYD 302
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 173 (66.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 37/110 (33%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ S H+ G +FPGTG + G G G + +N+ L
Sbjct: 173 DVHHGDGVEEFFYTTDRVMTCSFHKF--GEYFPGTGHIKDTGIGTGKNYAVNVP----LR 226
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y + F+ ++ + + F P+ V++ G D+ AG LG + LS
Sbjct: 227 DGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDR--LGCFNLS 274
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D +Y +++ V F+P+ V++ G D AG P + + ++P G +
Sbjct: 237 ----DEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 654 LMTLADGKVVLALE-GGYDLPSMCDSAEACVRALLGDAPPPLSQEELTRSPCLKAVETLQ 712
++ ++L E GGY+L + +LG + +S CL V L
Sbjct: 291 ILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPDHEVKS-CLSPVSVL- 348
Query: 713 KTIAIQVSHWPVLKRSAHTITWSALS 738
I + +P S + S LS
Sbjct: 349 --IIPYLKAYPFSSHSPPHLAGSMLS 372
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 175 (66.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/136 (33%), Positives = 68/136 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY++ RV+ S H+ G FFPGTG + G G G INI L
Sbjct: 184 DVHHGDGVEEAFYTNDRVMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINIP----LR 237
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ DA Y + F I+ + + + P +++ G D+ +G LG + LS
Sbjct: 238 DGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDR--LGPFNLSMRGHANCVNF 295
Query: 654 LMTLADGKVVLALEGG 669
+ +L G V+ L GG
Sbjct: 296 VRSL--GVPVMVLGGG 309
Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 284 MPPKR-KLTHQ-IRPRSLDTSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRSDMVLLYEL 341
M P R ++ H I L ++ Q +L L T+E + + + D + L+E
Sbjct: 38 MKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFHTDEYIDFIDRVTPDNLHLFER 97
Query: 342 KQALDN 347
+Q + N
Sbjct: 98 EQVIFN 103
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 175 (66.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/136 (33%), Positives = 68/136 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY++ RV+ S H+ G FFPGTG + G G G INI L
Sbjct: 184 DVHHGDGVEEAFYTNDRVMTCSFHKF--GEFFPGTGNLTDIGIGKGKYHAINIP----LR 237
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ DA Y + F I+ + + + P +++ G D+ +G LG + LS
Sbjct: 238 DGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDR--LGPFNLSMRGHANCVNF 295
Query: 654 LMTLADGKVVLALEGG 669
+ +L G V+ L GG
Sbjct: 296 VRSL--GVPVMVLGGG 309
Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 284 MPPKR-KLTHQ-IRPRSLDTSVKTTAFQTLIDLGLNPIPTEEIVTHYNELRSDMVLLYEL 341
M P R ++ H I L ++ Q +L L T+E + + + D + L+E
Sbjct: 38 MKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFHTDEYIDFIDRVTPDNLHLFER 97
Query: 342 KQALDN 347
+Q + N
Sbjct: 98 EQVIFN 103
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H+ G+FFPGTG + G G + +N+ LN
Sbjct: 188 DVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIRDVGAEKGKYYALNVP----LN 241
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
M D + + FR ++ V + + P+ V++ G D+ +G LG + LS
Sbjct: 242 DGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDR--LGCFNLS 289
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y +++ V + F+P+ V++ G D AG P + + ++P C Y
Sbjct: 237 ----DEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 291 ILQWQLATLILGG------GGYNL 308
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDMSDVGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y +++ V + F+P+ V++ G D AG P + + ++P C Y
Sbjct: 237 ----DEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 291 VLQWQLATLILGG------GGYNL 308
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDMSDVGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y +++ V + F+P+ V++ G D AG P + + ++P C Y
Sbjct: 237 ----DEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 291 VLQWQLATLILGG------GGYNL 308
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 169 (64.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ S H++ G FFPGTG + G G G ++N+ L
Sbjct: 185 DVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGELRDIGVGKGKYHSVNVP----LR 238
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ DA Y + F ++ + + + P +++ G D+ +G LG + LS
Sbjct: 239 DGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDR--LGCFNLS 286
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ S H++ G FFPGTG + G G G ++N+ L
Sbjct: 185 DVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGELRDIGVGKGKYHSVNVP----LR 238
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ DA Y + F ++ + + + P +++ G D+ +G LG + LS
Sbjct: 239 DGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDR--LGCFNLS 286
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 166 (63.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 86 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 139
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 140 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 187
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 168 (64.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +NI L
Sbjct: 174 DVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNIP----LR 227
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
M D Y + F I+ V + F P V++ G D+ G LG + L+
Sbjct: 228 DGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDR--LGCFNLT 275
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 44/144 (30%), Positives = 72/144 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 216 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ 274
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
D +Y +++ V F+P+ V++ G D AG P + + ++P C Y
Sbjct: 275 ----DEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 328
Query: 650 MTQ-QLMTLADGKVVLALEGGYDL 672
+ Q QL TL G GGY+L
Sbjct: 329 ILQWQLATLILGG------GGYNL 346
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 167 (63.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 230
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS----PACFGY 649
+ D Y A F+ I+ V + + P V++ G D+ +G LG + L+ C Y
Sbjct: 231 DGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTIKGHAKCVEY 288
Query: 650 MTQQLMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
M + L ++L GGY + ++ C + E V AL P L
Sbjct: 289 MKSFNLPL----LMLG-GGGYTIKNVARCWTFETAV-ALDSTIPNEL 329
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNF-FPGTGGPIECGTGAGLGFNINIAWSGAL 592
D HHG+G Q FY D V +S+H + G + FPGTG E G G G ++ N+ L
Sbjct: 168 DAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGTGAVNERGQGNGYSYSFNVP----L 221
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDA 629
+ D +L ++RT+V VA F P I+L G DA
Sbjct: 222 DAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADA 258
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNF-FPGTGGPIECGTGAGLGFNINIAWSGAL 592
D HHG+G Q FY D V +S+H + G + FPGTG E G G G ++ N+ L
Sbjct: 168 DAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGTGAVNERGQGNGYSYSFNVP----L 221
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDA 629
+ D +L ++RT+V VA F P I+L G DA
Sbjct: 222 DAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADA 258
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 164 (62.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y +++ V F+P+ V++ G D AG P + + ++P G +
Sbjct: 237 ----DERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 654 LMTLADGKVVLALEGGYDL 672
++ ++L GGY+L
Sbjct: 291 ILQWELATLILG-GGGYNL 308
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 164 (62.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDCIQ 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y +++ V F+P+ V++ G D AG P + + ++P G +
Sbjct: 237 ----DERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKY 290
Query: 654 LMTLADGKVVLALEGGYDL 672
++ ++L GGY+L
Sbjct: 291 ILQWELATLILG-GGGYNL 308
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 166 (63.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 176 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 229
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 277
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 166 (63.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 183 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNYP----LR 236
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y A F+ ++ V + F P V++ G D+ +G LG + L+
Sbjct: 237 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDR--LGCFNLT 284
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G Q+ FY RV+ +S H+ G+FFPGTG E G G +++N+ + ++
Sbjct: 179 DVHHGDGVQEAFYLTDRVMTVSFHKFG-GDFFPGTGDIDEIGAKTGKLYSVNVPLADGID 237
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDA 629
D YL F+ ++ V + P ++++ G D+
Sbjct: 238 ----DKNYLNIFKPVIQGVMDYYRPSVIVLQCGADS 269
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G++FPGTG + G G +++N L
Sbjct: 171 DIHHGDGVEEAFYTTDRVMTVSFHKY--GDYFPGTGDVKDIGADKGKYYSLNFP----LK 224
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
+ D Y + FR I+ V + P V++ G D+ G LG + L+ +
Sbjct: 225 DGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDR--LGCFNLTLRGHAQCIEF 282
Query: 654 LMTLADGKVVLALEGGYDLPSM 675
L + VVL GGY + ++
Sbjct: 283 LKSFNVPLVVLG-GGGYTIKNV 303
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 147 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 204
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 205 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 258
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 259 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 299
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 147 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 204
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 205 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 258
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 259 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 299
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY RV+ +S H+ D FFPGTG E G G + IN+ L
Sbjct: 172 DVHHGDGVEEAFYFTDRVMTVSFHKFGD-KFFPGTGDVKEIGEREGKFYAINVP----LK 226
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D+ + FRTI+ V + + P +++ G D+ A LG + LS
Sbjct: 227 DGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDR--LGCFNLS 274
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 235 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 288
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 289 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 329
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 235 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 288
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 289 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 329
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 235 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 288
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 289 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 329
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 48/161 (29%), Positives = 78/161 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
DVHHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 193 DVHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGELRDIGVGQGKYYAVNFP----LR 246
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGY 649
+ D Y + F ++ V + + P+ V++ G D+ +G LG + LS C Y
Sbjct: 247 DGIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDR--LGCFNLSMRGHANCVKY 304
Query: 650 MTQ-QLMTLADGKVVLALEGGYDLPSMCDSAEACVRALLGD 689
+ L TL G GGY + ++ + L+GD
Sbjct: 305 VKSFNLPTLIVGG------GGYTMRNVARTWAFETGILVGD 339
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 239 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 296
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 297 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 350
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 351 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 391
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H+ G++FPGTG + G G+G +++N+ L+
Sbjct: 184 DIHHGDGVEEAFYATDRVMTVSFHKF--GDYFPGTGHIQDIGYGSGKYYSLNVP----LD 237
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS 643
+ D Y F+ I+ V + F P V++ G D+ +G LG + LS
Sbjct: 238 DGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDR--LGCFNLS 285
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 271 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 328
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 329 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 382
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 383 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 423
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/163 (28%), Positives = 79/163 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 235 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 288
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
T ++L GGY + ++ C + E V AL + P L
Sbjct: 289 AKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 329
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 149 (57.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 95 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 148
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDA 629
+ D Y F+ ++ V + P +++ G D+
Sbjct: 149 RDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADS 185
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 158 (60.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYALNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ G LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSL-GRDR-LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 159 (61.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N L
Sbjct: 175 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFP----LR 228
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLS----PACFGY 649
+ D Y F+ I+ V + + P + + G D+ +G LG + L+ C +
Sbjct: 229 DGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDR--LGCFNLTLKGHAKCVEF 286
Query: 650 MTQQLMTLADGKVVLALEGGYDL 672
M Q + L +L GGY +
Sbjct: 287 MKQYNLPL-----LLMGGGGYTI 304
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 155 (59.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 155 (59.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 155 (59.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 155 (59.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ + +VL GGY
Sbjct: 282 YVKSFNIPLLVLG-GGGY 298
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGN-FFPGTGGPIECGTGAGLGFNINIAWSGAL 592
D+HHG+G Q+ FY RV+ +S H++ GN FFPGTG E G +G + +N+ L
Sbjct: 170 DIHHGDGVQEAFYLTDRVMTVSFHKY--GNYFFPGTGDMYEVGAESGRYYCLNVP----L 223
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
+ D Y F+ ++ V + P +++ G D+ LG + LS G +
Sbjct: 224 RDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDR--LGCFNLSIRGHGECVE 281
Query: 653 QLMTLADGKVVLALEGGY 670
+ +VL GGY
Sbjct: 282 FVKGFKIPLLVLG-GGGY 298
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 118 (46.6 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPI 572
+DVHHGNGT++I +D+ +LSIH ++G F+PG+GG +
Sbjct: 1274 FDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYPGSGGGV 1312
Score = 102 (41.0 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 592 LNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDA-AAGHPPPLGGYKLSPACFGYM 650
L+P + +L AF +I++ ++ P+++L+S GFDA H L L + +
Sbjct: 1390 LDPKSSASSFLKAF-SIIIDKLNDYQPELILISCGFDAHMEDH---LASLCLLEENYVEI 1445
Query: 651 TQQLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGD 689
T+ L +AD G++V LEGGY++ ++ A + AL D
Sbjct: 1446 TRSLRRVADRWCKGRLVSILEGGYNINALRQCTIAHLSALSED 1488
Score = 37 (18.1 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 23/97 (23%), Positives = 38/97 (39%)
Query: 261 TQDLQKLMTAADMQADNRKTDKKMPPKRKLTH-QIRPRSLDTSVKTTAFQTL---IDLGL 316
TQ Q ++ QA + + ++ L H Q + ++ + L ID +
Sbjct: 577 TQQAQHILAQQQAQAQQQYIQQLQLQQQTLAHAQSQAAHQAQTLTHSRHNDLLSPIDSQI 636
Query: 317 -NPIPTEEIVTHYNELRSDMVLLYELKQALDNYQFEL 352
PI I THYN S + L L ++ + EL
Sbjct: 637 WAPIQYSWIQTHYNPSSSLLECLKRLINSVVVFSNEL 673
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 124 (48.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 554 LSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVA 613
+S+H+ G FFPGTG + G G G +++N+ + D +Y +++ V
Sbjct: 3 VSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ----DEKYYHICESVLKEVY 57
Query: 614 KEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQLMTLADGKVVLALE-GGYDL 672
F+P+ V++ G D AG P + + ++P G + ++ ++L E GGY+L
Sbjct: 58 IAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNL 115
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/138 (32%), Positives = 65/138 (47%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPG-TGGPIECGTGAGLGFNINIAWSGAL 592
D HHGNGTQ IFY VL++S+H D +P +G E G+GAG G N+N+ L
Sbjct: 195 DFHHGNGTQNIFYDRGDVLFVSLHG-DPAVSYPYFSGHASERGSGAGEGCNLNLP----L 249
Query: 593 NPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQ 652
Y A + + F P++++VS G D P + + L F M Q
Sbjct: 250 PKNTSWQHYRQALE-LACKQLRAFAPELLVVSLGVDTFKDDP--ISHFLLESEDFLGMGQ 306
Query: 653 QLMTLADGKVVLALEGGY 670
+ T+ + +EGGY
Sbjct: 307 IIATVGT-PTLFVMEGGY 323
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 127 (49.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 554 LSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALNPPMGDAEYLAAFRTIVMPVA 613
+S+H+ G FFPGTG + G G G +++N+ + D +Y +++ V
Sbjct: 3 VSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNVPIQDGIQ----DEKYYQICESVLKEVY 57
Query: 614 KEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA----CFGYMTQ-QLMTLADGKVVLALEG 668
+ F+P+ V++ G D AG P + + ++P C Y+ Q QL TL G G
Sbjct: 58 QAFNPKAVVLQLGADTIAGDP--MCSFNMTPVGIGKCLKYILQWQLATLILGG------G 109
Query: 669 GYDL 672
GY+L
Sbjct: 110 GYNL 113
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 162 (62.1 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 522 REKTQYFPFRCWDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLG 581
REK + D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G
Sbjct: 1165 REKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVTDTGLGKGRW 1223
Query: 582 FNINIAWSGALNPPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHP 634
+ +N+ + + D Y F +++ V F+P+ V++ G D AG P
Sbjct: 1224 YAVNVPFEDGVR----DDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDP 1272
Score = 40 (19.1 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 307 AFQTLIDLGLNPIPTEEIVTHYNELRSDMVLLYELKQALDN 347
A Q + +GL P P E+ +T L D + L + QA +N
Sbjct: 846 AHQKHLTVGLPPEPREKTITA--PLPPDQLALL-IDQASEN 883
Score = 38 (18.4 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 226 LKRLFERTPEQVEE 239
L +F +PEQVEE
Sbjct: 337 LDGIFINSPEQVEE 350
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S N FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVS--EVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPACFGYMTQQ 653
D Y F+ I+ V + + P V++ G D+ +G LG + L+ +
Sbjct: 235 ----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVKGHAKCVEV 288
Query: 654 LMTLADGKVVLALEGGYDLPSM--CDSAEACVRALLGDAPPPL 694
+ T ++L GGY + ++ C + E V AL + P L
Sbjct: 289 VKTFNLPLLMLG-GGGYTIRNVARCWTYETAV-ALDCEIPNEL 329
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNIN 585
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N
Sbjct: 151 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVN 200
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G ++ FY+ RV+ +S H++ G +FPGTG + G G G + +N ++
Sbjct: 177 DIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234
Query: 594 PPMGDAEYLAAFRTIVMPVAK-EFDPQIVL 622
D Y F+ ++ + + F ++ L
Sbjct: 235 ----DESYGQIFKPVITKIGEITFPTKVCL 260
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGA- 591
+DVHHGNGT+ I + + + D G F C + + I S
Sbjct: 164 FDVHHGNGTEDIITNH----FNATPEDDKGYLF--------CSSYQYPLYPFEIQESDTP 211
Query: 592 --LNPPMGDAEYLAAFRTIV----MPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA 645
+N P+ FR + +P +F P+++L+SAGFDA + L+ A
Sbjct: 212 PIINTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFDAHI--EDEMSHVSLTEA 269
Query: 646 CFGYMTQQLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGD 689
+ ++T +L +A+ G++V LEGGY ++ S A V L+G+
Sbjct: 270 DYRWITDELKIIAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIGN 317
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGA- 591
+DVHHGNGT+ I + + + D G F C + + I S
Sbjct: 164 FDVHHGNGTEDIITNH----FNATPEDDKGYLF--------CSSYQYPLYPFEIQESDTP 211
Query: 592 --LNPPMGDAEYLAAFRTIV----MPVAKEFDPQIVLVSAGFDAAAGHPPPLGGYKLSPA 645
+N P+ FR + +P +F P+++L+SAGFDA + L+ A
Sbjct: 212 PIINTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFDAHI--EDEMSHVSLTEA 269
Query: 646 CFGYMTQQLMTLAD----GKVVLALEGGYDLPSMCDSAEACVRALLGD 689
+ ++T +L +A+ G++V LEGGY ++ S A V L+G+
Sbjct: 270 DYRWITDELKIIAEEYGKGRIVSVLEGGYAPSALGRSVVAHVNGLIGN 317
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 128 (50.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F K+V SIHR+D G F+PGTG + NI LN
Sbjct: 237 DLHHGDGVENAFKFSKKVATCSIHRYDIG-FYPGTGS-----LKSSRENTYNIPTEKGLN 290
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAA 631
D+ L + IV P+ F P+ +++ G D A
Sbjct: 291 ----DSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLA 324
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 129 IPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHD 170
+ TY D E+++ L P + + D DL IVI +
Sbjct: 103 LTTYHDDEFVKHLMGPRTFLDKNFNKIDKAET-DLTNIVIEE 143
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 128 (50.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINIAWSGALN 593
D+HHG+G + F K+V SIHR+D G F+PGTG + NI LN
Sbjct: 237 DLHHGDGVENAFKFSKKVATCSIHRYDIG-FYPGTGS-----LKSSRENTYNIPTEKGLN 290
Query: 594 PPMGDAEYLAAFRTIVMPVAKEFDPQIVLVSAGFDAAA 631
D+ L + IV P+ F P+ +++ G D A
Sbjct: 291 ----DSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLA 324
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 129 IPTYTDTEYLQELQSPTWTRAETDHLFDLCHRFDLRFIVIHD 170
+ TY D E+++ L P + + D DL IVI +
Sbjct: 103 LTTYHDDEFVKHLMGPRTFLDKNFNKIDKAET-DLTNIVIEE 143
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 533 WDVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFP 566
WDVHHG GTQ IF D VLY S HR++ F+P
Sbjct: 173 WDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWP 206
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINI 586
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNV 229
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 534 DVHHGNGTQQIFYSDKRVLYLSIHRHDDGNFFPGTGGPIECGTGAGLGFNINI 586
D+HHG+G + F +V+ +S+H+ G FFPGTG + G G G +++N+
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGTGDVSDVGLGKGRYYSVNV 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 774 761 0.00091 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 199
No. of states in DFA: 616 (65 KB)
Total size of DFA: 412 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.60u 0.10s 71.70t Elapsed: 00:00:47
Total cpu time: 71.65u 0.11s 71.76t Elapsed: 00:00:49
Start: Thu Aug 15 12:36:08 2013 End: Thu Aug 15 12:36:57 2013
WARNINGS ISSUED: 1