BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15138
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D2XV59|GTPB1_RAT GTP-binding protein 1 OS=Rattus norvegicus GN=Gtpbp1 PE=1 SV=1
Length = 669
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L+SPT EQ+D L +++ +D G GETIY IG G DG E GL + EAS AT++S+A
Sbjct: 67 LVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQ 126
Query: 169 LEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELD 228
+EAD +LLR+R+ G YL+RKRV DFLE+RVAVVGNVDAGKSTLLGVLTHGELD
Sbjct: 127 IEADVILLRERQESGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELD 186
Query: 229 NGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAK 286
NGRG ARQKLFRHKHE+ESGRTSSVGNDILGFDS GNVVNKP+ GSL+W KICE+S+K
Sbjct: 187 NGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSSK 246
Query: 287 VITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
VITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 247 VITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 278
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 273 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 330
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 331 SPGCRKIPVL 340
>sp|O08582|GTPB1_MOUSE GTP-binding protein 1 OS=Mus musculus GN=Gtpbp1 PE=1 SV=2
Length = 668
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L+SPT EQ+D L +++ +D G GETIY IG G DG E GL + EAS AT++S+A
Sbjct: 67 LVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQ 126
Query: 169 LEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELD 228
+EAD +LLR+R+ G YL+RKRV DFLE+RVAVVGNVDAGKSTLLGVLTHGELD
Sbjct: 127 IEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELD 186
Query: 229 NGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAK 286
NGRG ARQKLFRHKHE+ESGRTSSVGNDILGFDS GNVVNKP+ GSL+W KICE+S+K
Sbjct: 187 NGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSSK 246
Query: 287 VITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
VITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 247 VITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 278
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 273 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 330
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 331 SPGCRKIPVL 340
>sp|Q58DC5|GTPB1_BOVIN GTP-binding protein 1 OS=Bos taurus GN=GTPBP1 PE=2 SV=2
Length = 669
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L+SPT EQ+D L +++ +D G GETIY IG G DG E GL + EAS AT++S+A
Sbjct: 67 LVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQ 126
Query: 169 LEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELD 228
+EAD +LLR+R+ G YL+RKRV DFLE+RVAVVGNVDAGKSTLLGVLTHGELD
Sbjct: 127 IEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELD 186
Query: 229 NGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAK 286
NGRG ARQKLFRHKHE+ESGRTSSVGNDILGFDS GNVVNKP+ GSL+W KICE+S K
Sbjct: 187 NGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTK 246
Query: 287 VITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
VITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 247 VITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 278
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 273 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 330
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 331 SPGCRKIPVL 340
>sp|O00178|GTPB1_HUMAN GTP-binding protein 1 OS=Homo sapiens GN=GTPBP1 PE=1 SV=3
Length = 669
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L+SPT EQ+D L +++ +D G GETIY IG G DG E GL + EAS AT++S+A
Sbjct: 67 LVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQ 126
Query: 169 LEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELD 228
+EAD +LLR+R+ G YL+RKRV DFLE+RVAVVGNVDAGKSTLLGVLTHGELD
Sbjct: 127 IEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELD 186
Query: 229 NGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAK 286
NGRG ARQKLFRHKHE+ESGRTSSVGNDILGFDS GNVVNKP+ GSL+W KICE+S K
Sbjct: 187 NGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTK 246
Query: 287 VITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
VITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 247 VITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 278
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 273 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 330
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 331 SPGCRKIPVL 340
>sp|Q5R8Q7|GTPB1_PONAB GTP-binding protein 1 (Fragment) OS=Pongo abelii GN=GTPBP1 PE=2
SV=2
Length = 602
Score = 300 bits (769), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 110 ISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATTL 169
+SPT EQ+D L +++ +D G G TIY IG G DG E GL + EAS AT++S+A +
Sbjct: 1 VSPTSEQYDSLLRQMWERMDEGCGGTIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQI 60
Query: 170 EADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELDN 229
EAD +LLR+R+ G YL+RKRV DFLE+RVAVVGNVDAGKSTLLGVLTHGELDN
Sbjct: 61 EADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDN 120
Query: 230 GRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAKV 287
GRG ARQKLFRHKHE+ESGRTSSVGNDILGFDS GNVVNKP+ GSL+W KICE+S KV
Sbjct: 121 GRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKV 180
Query: 288 ITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
ITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 181 ITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 211
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 206 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 263
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 264 SPGCRKIPVL 273
>sp|Q5XGS8|GTPB1_XENLA GTP-binding protein 1 OS=Xenopus laevis GN=gtpbp1 PE=2 SV=1
Length = 654
Score = 298 bits (763), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 172/212 (81%), Gaps = 2/212 (0%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L+SP+ EQ+D L +++ +D GRGETIY IG G DG E GL + EASVAT+ S+A
Sbjct: 56 LVSPSAEQYDSLLHQLRDRMDEGRGETIYVIGQGSDGTEYGLNEADMEASVATVTSMAEQ 115
Query: 169 LEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELD 228
+ AD +LLR+ + G YL+RK V DFLE+RVAVVGNVDAGKSTLLGVLTHGELD
Sbjct: 116 IVADMILLREHQEAGGKVQDYLVRKSVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELD 175
Query: 229 NGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEH--GSLDWVKICERSAK 286
NGRG ARQKLFRHKHE+ESGRTSSVGNDILGFD+ G VVNKP++ GSL+W KICE+S+K
Sbjct: 176 NGRGFARQKLFRHKHEIESGRTSSVGNDILGFDNHGQVVNKPDNHGGSLEWTKICEKSSK 235
Query: 287 VITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
+ITFIDLAGHE+YLKTTVFGMTGH+PDF MLM
Sbjct: 236 IITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 267
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D ML VG+NAGIVGMTKEHLGLALAL+VPVFVVVTKIDMCP N+LQ+TLKLL R+LK
Sbjct: 262 DFCMLM--VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLK 319
Query: 97 SPGCRKVPVM 106
SPGCRK+PV+
Sbjct: 320 SPGCRKIPVL 329
>sp|Q17045|AGP1_ASCSU GTP-binding protein AGP-1 OS=Ascaris suum GN=AGP-1 PE=2 SV=1
Length = 591
Score = 224 bits (570), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 141/198 (71%), Gaps = 3/198 (1%)
Query: 124 IKSLIDNGRGETIYDIGIG-QDGGENGLKPDEYEASVATLQSLATTLEADCVLLRQRKLD 182
IKS++ G GE I ++G+ D + GL +E + + + L L ++
Sbjct: 58 IKSMLCCGEGEAIVELGVSIYDDTQKGLSKEELQIAEERHKQLMNQSNISSSHLVTKRCG 117
Query: 183 NGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHK 242
+ T +L+R V++ DF+E+RVAVVGNVDAGKSTLLGVLTH LD+GRG AR+KLFRHK
Sbjct: 118 DLYTSFHLIRDSVDADDFIEVRVAVVGNVDAGKSTLLGVLTHSALDDGRGQARRKLFRHK 177
Query: 243 HEMESGRTSSVGNDILGFDSVGNVVNKPE--HGSLDWVKICERSAKVITFIDLAGHERYL 300
HE ESGRTSSVGNDILGF G +VNKP+ G+LDWV IC SAKVITFIDLAGHE+YL
Sbjct: 178 HEFESGRTSSVGNDILGFSMDGQIVNKPDVHSGNLDWVSICRDSAKVITFIDLAGHEKYL 237
Query: 301 KTTVFGMTGHVPDFGMLM 318
KTT+FGMTGH PD+ MLM
Sbjct: 238 KTTIFGMTGHAPDYTMLM 255
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 8/88 (9%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D++ML VG+NAGI+GMTKEHL LAL+LSVPVFVVVTKIDMCP VL +TL+ L R++K
Sbjct: 250 DYTMLM--VGSNAGIIGMTKEHLSLALSLSVPVFVVVTKIDMCPDQVLAETLRNLDRLMK 307
Query: 97 SPGCRKVPVMNCLISPTEEQFDLLQKKI 124
SPG RK+P+ P D++Q+ +
Sbjct: 308 SPGVRKLPL------PMRSMDDVVQRAL 329
>sp|Q9BX10|GTPB2_HUMAN GTP-binding protein 2 OS=Homo sapiens GN=GTPBP2 PE=2 SV=1
Length = 602
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 153/216 (70%), Gaps = 9/216 (4%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L++P++ +F+ L ++K + GRGE +Y IG+ +G GL +E AS+ TL +A
Sbjct: 74 LVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEK 133
Query: 169 LEADCVLLRQRKLD------NGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVL 222
+ AD +LR+R++D +T + L+RK ++Q FL++RVAV+GNVD+GKSTLLGVL
Sbjct: 134 VGADITVLREREVDYDSDMPRKIT-EVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVL 192
Query: 223 THGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICE 282
T GELDNGRG AR LFRH HE++SGRTSS+ +ILGF+S G VVN + + + +ICE
Sbjct: 193 TQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAE--EICE 250
Query: 283 RSAKVITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
S+K+ITFIDLAGH +YL TT+FG+T + PD +L+
Sbjct: 251 SSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLL 286
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRKVP 104
V AN GI G T+EHLGLALAL VP F+VV+KID+C ++ T++ L R+LK PGC KVP
Sbjct: 287 VSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVP 346
Query: 105 VM 106
++
Sbjct: 347 ML 348
>sp|Q3UJK4|GTPB2_MOUSE GTP-binding protein 2 OS=Mus musculus GN=Gtpbp2 PE=2 SV=1
Length = 602
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 153/216 (70%), Gaps = 9/216 (4%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLATT 168
L++P++ +F+ L ++K + GRGE +Y IG+ +G GL +E AS+ TL +A
Sbjct: 74 LVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEK 133
Query: 169 LEADCVLLRQRKLD------NGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVL 222
+ AD +LR+R++D +T + L+RK ++Q FL++RVAV+GNVD+GKSTLLGVL
Sbjct: 134 VGADITVLREREVDYDSDVPRKIT-EVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVL 192
Query: 223 THGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICE 282
T GELDNGRG AR LFRH HE++SGRTSS+ +ILGF+S G VVN + + + +ICE
Sbjct: 193 TQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAE--EICE 250
Query: 283 RSAKVITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
S+K+ITFIDLAGH +YL TT+FG+T + PD +L+
Sbjct: 251 SSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLL 286
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRKVP 104
V AN GI G T+EHLGLALAL VP F+VV+K+D+C ++ T++ L R+LK PGC KVP
Sbjct: 287 VSANTGIAGTTREHLGLALALKVPFFIVVSKVDLCAKTTVERTVRQLERVLKQPGCHKVP 346
Query: 105 VM 106
++
Sbjct: 347 ML 348
>sp|Q18905|CGP1_CAEEL GTP-binding protein cgp-1 OS=Caenorhabditis elegans GN=cgp-1 PE=2
SV=2
Length = 613
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 147/219 (67%), Gaps = 9/219 (4%)
Query: 109 LISPTEEQFDLLQKKIKSLIDNGRGETIYDIGI----GQDGGENGLKPDEYE-ASVATLQ 163
L+ T E + ++ + G GE + ++G ++GL ++ + A+ A L+
Sbjct: 40 LLRSTPEDVEKYMIHVRKQLMEGEGECLVELGAPINSNSKNPKSGLSEEDLDKAADAQLK 99
Query: 164 SLATTLEADCVLLRQRKLDNG--LTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGV 221
L ++R+++ G T +++R +DF+E RVAVVGNVDAGKSTLLGV
Sbjct: 100 ILEKIPAVGTKVIRRKQTGGGSLFTEVWIIRDPPTEKDFIEARVAVVGNVDAGKSTLLGV 159
Query: 222 LTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVGNVVNKPE--HGSLDWVK 279
LTH LD+GRG AR KLFRHKHE ESGRTSSVGNDILGFD GN+VNKP+ + +LDWV+
Sbjct: 160 LTHSALDDGRGAARTKLFRHKHEFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQ 219
Query: 280 ICERSAKVITFIDLAGHERYLKTTVFGMTGHVPDFGMLM 318
I AK++TFIDLAGHE+YLKTT+FGMTGH+PD+ MLM
Sbjct: 220 IGSDCAKLVTFIDLAGHEKYLKTTIFGMTGHMPDYTMLM 258
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Query: 37 DHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILK 96
D++ML +GAN GI+G TKEHL LAL+L VPV++VVTKIDMCP N+L++T+K + R+++
Sbjct: 253 DYTMLM--IGANMGIIGTTKEHLSLALSLHVPVYLVVTKIDMCPANILEETMKNITRLVR 310
Query: 97 SPGCRKVPVM 106
S +K+P++
Sbjct: 311 S--AKKLPIL 318
>sp|Q5UR72|YR624_MIMIV Putative GTP-binding protein R624 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R624 PE=3 SV=1
Length = 480
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 28/126 (22%)
Query: 193 KRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSS 252
+++ES ++ V+GNVDAGKS+ +GV+ LD+G G+AR + + KHE E+GRTS+
Sbjct: 29 EKIESSKYV-----VLGNVDAGKSSFVGVMKKCILDDGNGYARSLIAKTKHEKETGRTST 83
Query: 253 VGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHERYLKTTVFGMTGHVP 312
S +VN E + T IDL GHE+YLKTT+FG+TG
Sbjct: 84 --------QSSHYIVNNGE---------------ITTLIDLCGHEKYLKTTMFGITGLFC 120
Query: 313 DFGMLM 318
D+G+++
Sbjct: 121 DYGLVI 126
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 45 VGANAGI--VGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRK 102
V AN+ + G+T EH+ L A +P V+VTKID+CP N+L +LK + S +K
Sbjct: 127 VSANSTLEARGVTMEHISLLNANRIPFIVIVTKIDICPENILI-SLKKKFDYIASKSKKK 185
Query: 103 VPVMNCLISPTEEQFD--LLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVA 160
+ +EE+F+ L++ + LID+ + + + + + G ++
Sbjct: 186 I----LYFEDSEEEFNGSYLKESHQILIDSFQNRKTFVMPVIMVSNKTG-------HNIN 234
Query: 161 TLQSLATTLEADCVLLRQR--KLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTL 218
++ L T++++ L R+ K N L+ +Y + ++S +V G
Sbjct: 235 FVRELLTSIKSRSYLERKGLIKPMNKLSDKYPMIMYIDSS------FSVPG--------- 279
Query: 219 LGVLTHGELDNGRGHARQKLF 239
+G++ G + G QKLF
Sbjct: 280 IGIVLSGTVKYGSIKVGQKLF 300
>sp|Q6AXM7|HBS1L_RAT HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1
Length = 679
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 21/157 (13%)
Query: 158 SVATLQSLATTLEADCV---LLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVDAG 214
S A SL T+ E C L + KL + + L KR + L + V+G+VDAG
Sbjct: 210 STAHPPSLQTSEELGCTPTPLRKSGKLRQQIDVKAGLEKRQGGKQLLNL--VVIGHVDAG 267
Query: 215 KSTLLGVLTH--GELDNGRGHARQKLFRHKHEMES---GRTSSVGNDILGFDSVGNVVNK 269
KSTL+G + + G ++ K HK+E ES G+ S +L D G +
Sbjct: 268 KSTLMGHMLYLLGNVN--------KRTMHKYEQESKKAGKASFAYAWVL--DETGEERER 317
Query: 270 PEHGSLDWVKICERSAKVITFIDLAGHERYLKTTVFG 306
+ K E + KV+T +D GH+ ++ + G
Sbjct: 318 GVTMDVGMTKF-ETTTKVVTLMDAPGHKDFIPNMITG 353
>sp|A3MV69|EF1A_PYRCJ Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=tuf PE=3 SV=1
Length = 444
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 203 IRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDS 262
I +AVVG+VD GKSTL+G L + G+ +K F+ EM +G + F
Sbjct: 18 INLAVVGHVDNGKSTLVGRLLYET-----GYVDEKAFKEIEEM----AKKMGKEDFAFAW 68
Query: 263 VGNVVNKP-EHG-SLDWVKICERSAKV-ITFIDLAGHERYLKTTVFGMT 308
+ + + E G +++ + + K+ IT IDL GH ++K + G +
Sbjct: 69 ILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGAS 117
>sp|Q18KI6|IF2G_HALWD Translation initiation factor 2 subunit gamma OS=Haloquadratum
walsbyi (strain DSM 16790) GN=eif2g PE=3 SV=1
Length = 409
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL+ L+ D +H EM+ G + +G F
Sbjct: 9 EVNIGLVGHVDHGKTTLVQALSGSWTD-----------QHSEEMKRGISIRLGYADATFR 57
Query: 262 SVGNVVNKPEHGSLDWVKI---CERSAKVITFIDLAGHERYLKTTVFG 306
+ N +N PE ++D + + ++F+D GHE + T + G
Sbjct: 58 MISN-INPPEGYTVDETGPDGEPTETLRTVSFVDAPGHETLMATMLSG 104
>sp|A4WKK8|EF1A_PYRAR Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=tuf PE=3 SV=1
Length = 444
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 203 IRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDS 262
I +AVVG+VD GKSTL+G L + G+ +K F+ EM +G + F
Sbjct: 18 INLAVVGHVDNGKSTLVGRLLYET-----GYVDEKGFKEIEEM----AKKMGKEDFAFAW 68
Query: 263 VGNVVNKP-EHG-SLDWVKICERSAKV-ITFIDLAGHERYLKTTVFGMT 308
+ + + E G +++ + + K+ IT IDL GH ++K + G +
Sbjct: 69 ILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGAS 117
>sp|A1RRJ3|EF1A_PYRIL Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=tuf PE=3 SV=1
Length = 444
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 203 IRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDS 262
+ +AV+G+VD GKSTL+G L + G+ +K F+ EM +G + F
Sbjct: 18 LNLAVIGHVDNGKSTLVGRLLYET-----GYVDEKAFKEIEEM----AKKMGKEDFAFAW 68
Query: 263 VGNVVNKP-EHG-SLDWVKICERSAKV-ITFIDLAGHERYLKTTVFGMT 308
+ + + E G +++ + + K+ IT IDL GH ++K + G +
Sbjct: 69 ILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGAS 117
>sp|Q2KHZ2|HBS1L_BOVIN HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1
Length = 686
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 191 LRKRVESQDFLEIR--------VAVVGNVDAGKSTLLGVLTH--GELDNGRGHARQKLFR 240
LR++++ + LE R + V+G+VDAGKSTL+G L + G+++ K
Sbjct: 243 LRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVN--------KRTM 294
Query: 241 HKHEMES---GRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHE 297
HK+E ES G+ S +L D G + + K E KVIT +D GH+
Sbjct: 295 HKYEQESKKAGKASFAYAWVL--DETGEERERGVTMDVGMTKF-ETKTKVITLMDAPGHK 351
Query: 298 RYLKTTVFG 306
++ + G
Sbjct: 352 DFIPNMITG 360
>sp|Q5R6Y0|HBS1L_PONAB HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1
Length = 684
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 191 LRKRVESQDFLEIR--------VAVVGNVDAGKSTLLGVLTH--GELDNGRGHARQKLFR 240
LR++++ + LE R + V+G+VDAGKSTL+G + + G ++ K
Sbjct: 241 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNIN--------KRTM 292
Query: 241 HKHEMES---GRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHE 297
HK+E ES G+ S +L D G + + K E + KVIT +D GH+
Sbjct: 293 HKYEQESKKAGKASFAYAWVL--DETGEERERGVTMDVGMTKF-ETTTKVITLMDAPGHK 349
Query: 298 RYLKTTVFG 306
++ + G
Sbjct: 350 DFIPNMITG 358
>sp|Q9Y450|HBS1L_HUMAN HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1
Length = 684
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 191 LRKRVESQDFLEIR--------VAVVGNVDAGKSTLLGVLTH--GELDNGRGHARQKLFR 240
LR++++ + LE R + V+G+VDAGKSTL+G + + G ++ K
Sbjct: 241 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNIN--------KRTM 292
Query: 241 HKHEMES---GRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHE 297
HK+E ES G+ S +L D G + + K E + KVIT +D GH+
Sbjct: 293 HKYEQESKKAGKASFAYAWVL--DETGEERERGVTMDVGMTKF-ETTTKVITLMDAPGHK 349
Query: 298 RYLKTTVFG 306
++ + G
Sbjct: 350 DFIPNMITG 358
>sp|Q69ZS7|HBS1L_MOUSE HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2
Length = 682
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 191 LRKRVESQDFLEIR--------VAVVGNVDAGKSTLLGVLTH--GELDNGRGHARQKLFR 240
LR++++ + LE R + V+G+VDAGKSTL+G + + G ++ K
Sbjct: 239 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVN--------KRTM 290
Query: 241 HKHEMES---GRTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHE 297
HK+E ES G+ S +L D G + + K E + KVIT +D GH+
Sbjct: 291 HKYEQESKKAGKASFAYAWVL--DETGEERERGVTMDVGMTKF-ETTTKVITLMDAPGHK 347
Query: 298 RYLKTTVFG 306
++ + G
Sbjct: 348 DFIPNMITG 356
>sp|O93729|EF1A_PYRAE Elongation factor 1-alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tuf
PE=3 SV=1
Length = 444
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 203 IRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDS 262
I +AVVG+VD GKSTL+G L + G+ +K + EM +G + F
Sbjct: 18 INLAVVGHVDNGKSTLVGRLLYET-----GYVDEKALKEIEEM----AKKIGKEDFAFAW 68
Query: 263 VGNVVNKP-EHG-SLDWVKICERSAKV-ITFIDLAGHERYLKTTVFGMT 308
+ + + E G +++ + + K+ IT IDL GH ++K + G +
Sbjct: 69 ILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGAS 117
>sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1
PE=1 SV=1
Length = 595
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 184 GLTGQYLLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKH 243
G T YL+ K ++ L+ RVA+VG AGKSTLL ++T GEL G R RH H
Sbjct: 388 GYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMT-GELHPTEGMVR----RHNH 442
>sp|B9LSM6|IF2G_HALLT Translation initiation factor 2 subunit gamma OS=Halorubrum
lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 /
ACAM 34) GN=eif2g PE=3 SV=1
Length = 412
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL+ L+ D +H EM+ G + +G F
Sbjct: 9 EVNIGLVGHVDHGKTTLVQALSGSWTD-----------QHSEEMKRGISIRLGYADATFR 57
Query: 262 SVGNVVNKPEHGSLDWVKICERSA-----KVITFIDLAGHERYLKTTVFGMT 308
V+ PE ++D + CE + + ++F+D GHE + T + G +
Sbjct: 58 RCPG-VDAPECYTVD--EECEDGSESEPIRTVSFVDAPGHETLMATMLSGAS 106
>sp|Q9D9H8|CB069_MOUSE UPF0565 protein C2orf69 homolog OS=Mus musculus PE=2 SV=3
Length = 365
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 193 KRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLF----RHKHEMESG 248
+R +D ++ + V D +S L +LT E D+ F ++ HE+ +
Sbjct: 41 ERGSPEDSHRLQRSTVPGSDPQRSNELLLLTSREGDSPEQRHHVLYFPGDVQNYHEIMTR 100
Query: 249 RTSSVGNDILGFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHERYLKTTVFGMT 308
+ + +++ ++ + S WV C R + + ++ ++K+ +FG
Sbjct: 101 HPENYQWENWSLENIATILARRFPNSYIWVIKCSR----MHLHKFSCYDNFVKSNMFGAP 156
Query: 309 GHVPDFGMLMH 319
H PDFG H
Sbjct: 157 EHTPDFGAFKH 167
>sp|Q5WFU2|IF2_BACSK Translation initiation factor IF-2 OS=Bacillus clausii (strain
KSM-K16) GN=infB PE=3 SV=1
Length = 761
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKID---MCPPNVLQ--------------DT 87
V A+ G++ TKE + A A VP+ V V KID P V+Q DT
Sbjct: 342 VAADDGVMPQTKEAISHAKAAEVPIIVAVNKIDKETASPDRVMQELTEFELVPEAWGGDT 401
Query: 88 LKLLVRILKSPGCRKVPVMNCLISPTEEQFDLLQKK------IKSLIDNGRG 133
+ + V L G ++ M L++ EE F K +++ +D GRG
Sbjct: 402 IFVNVSALTGEGIDELIEMILLVAEVEE-FKANPDKLATGTVVEAQLDKGRG 452
>sp|Q9Y9C1|IF2G_AERPE Translation initiation factor 2 subunit gamma OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=eif2g PE=3 SV=2
Length = 414
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVG---NDIL 258
E+ + VVG+VD GK+TL+ LT RH E+ G T +G ++
Sbjct: 10 EVNIGVVGHVDHGKTTLVQALTG-----------VWTMRHSEEIRRGMTIKLGYADGEVW 58
Query: 259 GFDSVGNVVNKPEHGSLDWVKICERSA-----KVITFIDLAGHERYLKTTVFG 306
+ G PE S + V C+ A + ++++D GHE + T + G
Sbjct: 59 ECEGCGF----PERFSPEPVCECDPQASASLRRRVSYVDAPGHEILMATMLSG 107
>sp|A9BHA7|EFTU_PETMO Elongation factor Tu OS=Petrotoga mobilis (strain DSM 10674 / SJ95)
GN=tuf PE=3 SV=1
Length = 399
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVV-VTKIDMCPPNVLQDTLKLLVRIL----KSPG 99
V A G++ T+EH+ LA ++VP VV + K+DM L D +++ VR L + PG
Sbjct: 106 VAATDGVMPQTREHVLLARQVNVPALVVFINKVDMVDDEELIDLVEMEVRDLLNSYEFPG 165
Query: 100 CRKVPVM--NCLISPTEEQFD-LLQKKIKSLID 129
+VPV+ + L + E+ D +KI L+D
Sbjct: 166 -DEVPVIRGSALKALEEDNPDGPWTQKIYELMD 197
>sp|Q9HLA7|IF2G_THEAC Translation initiation factor 2 subunit gamma OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=eif2g PE=3 SV=1
Length = 411
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 203 IRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGND----IL 258
+ + +VG+VD GKSTL LT + D H E++ G + +G
Sbjct: 12 VNIGMVGHVDHGKSTLTLALTGTKTDT-----------HSEEIKRGISIKLGYADTPIYR 60
Query: 259 GFDSVGNVVNKPEHGSLDWVKICERSAKVITFIDLAGHERYLKTTVFG 306
+DS GNV E G + C+ +VI+ +D GHE + T + G
Sbjct: 61 CYDSSGNVHYTREKG-----ENCDLE-RVISIVDAPGHETLMATMLSG 102
>sp|O50340|EFTU_FERIS Elongation factor Tu OS=Fervidobacterium islandicum GN=tuf PE=3
SV=1
Length = 399
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVV-VTKIDMCPPNVLQDTLKLLVRILKS----PG 99
+ A G + T+EH+ LA ++VP +V + K+DM P L D +++ VR L S PG
Sbjct: 106 LAATDGPMPQTREHVLLARQVNVPAMIVFINKVDMVDPE-LVDLVEMEVRDLLSKYEFPG 164
Query: 100 CRKVPV-----MNCLISPTEEQFDLLQKKIKSLID 129
+VPV + + +P + D K IK L+D
Sbjct: 165 -DEVPVVRGSALKAIEAPNDPN-DPAYKPIKELLD 197
>sp|O29663|IF2G_ARCFU Translation initiation factor 2 subunit gamma OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2g PE=3 SV=1
Length = 424
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL+ L+ D RH E++ G + +G F
Sbjct: 25 EVNIGLVGHVDHGKTTLVAALSGVWTD-----------RHSEELKRGISIKLGYADATFR 73
Query: 262 SVGNVVNKPEHGSLDWVKICE------RSAKVITFIDLAGHERYLKTTVFG 306
PE +++ +IC + ++F+D GHE + T + G
Sbjct: 74 KCPE-CEPPEAYTVE--EICPIHGVETEILRTVSFVDSPGHEMLMATMLSG 121
>sp|Q7NGF9|DER_GLOVI GTPase Der OS=Gloeobacter violaceus (strain PCC 7421) GN=der PE=3
SV=1
Length = 455
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 190 LLRKRVESQDFLEIRVAVVGNVDAGKSTLLGVLTHGE 226
L + + E Q+ E+RV++VG + GKS+LL L GE
Sbjct: 165 LPKDQPEEQELPELRVSIVGRPNVGKSSLLNALVGGE 201
>sp|C3K705|SURE_PSEFS 5'-nucleotidase SurE OS=Pseudomonas fluorescens (strain SBW25)
GN=surE PE=3 SV=1
Length = 249
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 105 VMNCLISPTEEQFDLLQKKIKSLIDNGRGETIYDIGIGQDGGENGLKPDEYEASVAT-LQ 163
+ N IS D + I SL+D+ + I +G + G++ L Y +VA L+
Sbjct: 56 LANGFISVNGTPTDCVHLAINSLLDHEPDLVVSGINLGANLGDDVL----YSGTVAAALE 111
Query: 164 SLATTLEADCVLLRQRKLDNGLTGQYLLRKRVESQDFLEIRVAVVGNVD 212
A R+LDN T Y RK VE+ L++ V NV+
Sbjct: 112 GRFLGRTAFAFSFASRQLDNLPTAAYFARKLVEAHATLDLPPRTVLNVN 160
>sp|Q975N8|IF2G_SULTO Translation initiation factor 2 subunit gamma OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=eif2g PE=3 SV=2
Length = 418
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + VVG+VD GK+TL+ +T G K H E++ G T +G
Sbjct: 9 EVNIGVVGHVDHGKTTLVQAIT--------GVWTSK---HSEELKRGMTIKLGYAEASIG 57
Query: 262 SVGNVVNKPEHGSLDWVKICERSA--------KVITFIDLAGHERYLKTTVFG 306
N NKPE ++ C + + ++FID GHE + T + G
Sbjct: 58 VCPN-CNKPEAYVTEYS--CNQCGSDEKPQFLRKVSFIDAPGHEILMATMLSG 107
>sp|Q980A5|IF2G_SULSO Translation initiation factor 2 subunit gamma OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=eif2g PE=1 SV=1
Length = 415
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + VVG+VD GK+TL+ +T G K H E++ G T +G
Sbjct: 9 EVNIGVVGHVDHGKTTLVQAIT--------GIWTSK---HSEELKRGMTIKLGYAETNI- 56
Query: 262 SVGNVVNKPEH----------GSLDWVKICERSAKVITFIDLAGHERYLKTTVFG 306
V KPE GS D K R I+FID GHE + T + G
Sbjct: 57 GVCESCKKPEAYVTEPSCKSCGSDDEPKFLRR----ISFIDAPGHEVLMATMLSG 107
>sp|Q57918|SELB_METJA Selenocysteine-specific elongation factor OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=selB PE=3 SV=1
Length = 469
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRKVP 104
V A G T EHL + L++P VV+ KID+ ++ T + +IL S K
Sbjct: 94 VDAKEGPKTQTGEHLLVLDLLNIPTIVVINKIDIANDEEIKRTEMFMKQILNSTINLKNS 153
Query: 105 VMNCLISPTEEQFDLLQKKIKSLIDN 130
+ + + T E L+K++K+L+D+
Sbjct: 154 KIIKISAKTGEGIGELKKELKNLLDS 179
>sp|Q3IMM5|IF2G_NATPD Translation initiation factor 2 subunit gamma OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=eif2g PE=3
SV=1
Length = 409
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL+ L+ GE + +H EM+ G + +G F
Sbjct: 9 EVNIGLVGHVDHGKTTLVESLS-GEWTD----------QHSEEMKRGISIRLGYADATFR 57
Query: 262 SVGNVVNKPEHGSLDWVKICERSA-----KVITFIDLAGHERYLKTTVFG 306
+++P+ +++ + C + + ++F+D GHE + T + G
Sbjct: 58 ECPE-LDEPDRYTVE--ETCPDGSESEHLRTVSFVDAPGHETLMATMLSG 104
>sp|B4MRZ9|CLP1_DROWI Protein CLP1 homolog OS=Drosophila willistoni GN=cbc PE=3 SV=1
Length = 425
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 27/139 (19%)
Query: 109 LISPTEEQFDLLQKKIKSLID--NGRGETIYDIGIGQDGGENGLKPDEYEASVATLQSLA 166
L S +E +F++ QK +K L+ NG E G +K +YE + ++
Sbjct: 13 LESDSELRFEIEQKDVKVLVTLVNGFAELF---------GTELVKKKKYEFGMGAKVAIF 63
Query: 167 TTLEADCVLLRQRKLDNGLTG------QYL--------LRKRVESQDFLEIRVAVVGNVD 212
T CVL Q K+D QY+ R+ E +D VVG +D
Sbjct: 64 TY--QGCVLHVQGKMDVCYVSKETPMVQYVNCHAALEQFRQEAEEKDACGPVAMVVGPMD 121
Query: 213 AGKSTLLGVLTHGELDNGR 231
GKSTL +L + + GR
Sbjct: 122 VGKSTLCRILLNYAVRVGR 140
>sp|Q5UYS2|IF2G_HALMA Translation initiation factor 2 subunit gamma OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=eif2g PE=3 SV=1
Length = 409
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL+ L+ GE + +H EM+ G + +G F
Sbjct: 8 EVNIGLVGHVDHGKTTLVQALS-GEWTD----------QHSEEMKRGISIRLGYADATFR 56
Query: 262 SVGNVVNKPEHGSLDWVKICERSA------KVITFIDLAGHERYLKTTVFG 306
+PE ++D + C+ + ++F+D GHE + T + G
Sbjct: 57 RCPE-AEEPEAFTVD--EHCDDHDVDTDHLRTVSFVDAPGHETLMATMLSG 104
>sp|O59410|IF2G_PYRHO Translation initiation factor 2 subunit gamma OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2g PE=3 SV=1
Length = 411
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL LT D H E+ G T +G
Sbjct: 11 EVNIGMVGHVDHGKTTLTKALTGVWTDT-----------HSEELRRGITIKIGF------ 53
Query: 262 SVGNVVNKPEHGSLDWVKICERSA------KVITFIDLAGHERYLKTTVFGMT 308
+ + P G +C + ++FID GHE + T + G +
Sbjct: 54 ADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGAS 106
>sp|B6YW69|IF2G_THEON Translation initiation factor 2 subunit gamma OS=Thermococcus
onnurineus (strain NA1) GN=eif2g PE=3 SV=1
Length = 410
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL LT D H E+ G T +G
Sbjct: 11 EVNIGMVGHVDHGKTTLTKALTGIWTDT-----------HSEELRRGITIKIGF------ 53
Query: 262 SVGNVVNKPEHGSLDWVKICERSA------KVITFIDLAGHERYLKTTVFGMT 308
+ + P G IC + ++FID GHE + T + G +
Sbjct: 54 ADAEIRKCPSCGRYSTSPICPYCGHETEFERRVSFIDAPGHEALMTTMLAGAS 106
>sp|Q3AFV0|HFLX_CARHZ GTPase HflX OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hflX PE=3 SV=1
Length = 414
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 205 VAVVGNVDAGKSTLLGVLTHGELDNGRG-HARQKLFRHKHEMESGRTSSVGNDILGFDSV 263
VA+VG +AGKSTLL LT G G A KLF T G +L D+V
Sbjct: 193 VALVGYTNAGKSTLLNALT------GAGVLAEDKLFATLDPTVRKLTLPGGQKLLLIDTV 246
Query: 264 GNVVNKP 270
G + N P
Sbjct: 247 GFIENMP 253
>sp|Q1LLR6|IF2_RALME Translation initiation factor IF-2 OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=infB PE=3 SV=1
Length = 979
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPN 82
V A+ G++ TKE + A A VP+ V +TK+D N
Sbjct: 559 VAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDKPEAN 596
>sp|Q9V1G0|IF2G_PYRAB Translation initiation factor 2 subunit gamma OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2g PE=1 SV=1
Length = 411
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL LT D H E+ G T +G
Sbjct: 11 EVNIGMVGHVDHGKTTLTKALTGVWTDT-----------HSEELRRGITIKIGF------ 53
Query: 262 SVGNVVNKPEHGSLDWVKICERSA------KVITFIDLAGHERYLKTTVFGMT 308
+ + P G +C + ++FID GHE + T + G +
Sbjct: 54 ADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGAS 106
>sp|A7HBL7|EFTU_ANADF Elongation factor Tu OS=Anaeromyxobacter sp. (strain Fw109-5)
GN=tuf1 PE=3 SV=1
Length = 396
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVV-VTKIDMCPPNVLQDTLKLLVRILKS----PG 99
V A G + T+EH+ LA + VP VV + K+DM L D ++L VR L S PG
Sbjct: 106 VSAADGPMPQTREHILLARQVGVPYMVVFLNKVDMVDDKELLDLVELEVRELLSEYEFPG 165
Query: 100 CRKVPVM--NCLISPTEEQFDLLQKKIKSLID 129
++P++ + L + ++ +L + I+ L+D
Sbjct: 166 -NEIPIVKGSALKALEGDKSELGEPAIQQLLD 196
>sp|Q8RAS5|HFLX_THETN GTPase HflX OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=hflX PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 205 VAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFDSVG 264
VA+VG +AGKSTLL LT + + KLF G +++ D+VG
Sbjct: 216 VAIVGYTNAGKSTLLNALTGAD-----AYVEDKLFATLDPTARKLVLPSGREVILTDTVG 270
Query: 265 NVVNKPEHGSLDWVKICERSAKVITFIDLAGH 296
+ P D V+ + + + + + DL H
Sbjct: 271 FIRKLPH----DLVEAFKSTLEEVKYADLLLH 298
>sp|Q5JDL3|IF2G_PYRKO Translation initiation factor 2 subunit gamma OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2g PE=3 SV=1
Length = 410
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 202 EIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGFD 261
E+ + +VG+VD GK+TL LT D H E+ G T +G
Sbjct: 11 EVNIGMVGHVDHGKTTLTKALTGIWTDT-----------HSEELRRGITIKIGF------ 53
Query: 262 SVGNVVNKPEHGSLDWVKICERSA------KVITFIDLAGHERYLKTTVFGMT 308
+ + P G +C + ++FID GHE + T + G +
Sbjct: 54 ADAEIRKCPHCGKYSTSPVCPYCGHETEFERRVSFIDAPGHEALMTTMLAGAS 106
>sp|Q01SX2|EFTU_SOLUE Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076)
GN=tuf1 PE=3 SV=1
Length = 395
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVV-VTKIDMCPPNVLQDTLKLLVR-ILKS 97
V A G + T+EH+ LA + VP VV + K+DM + L D ++L VR +LKS
Sbjct: 107 VAATDGPMPQTREHILLARQVGVPYIVVAMNKVDMVDDSELLDLVELEVRELLKS 161
>sp|Q6L202|EF1A_PICTO Elongation factor 1-alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tuf PE=3
SV=1
Length = 424
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 34 SPADHSMLQSKVGANAGIVGMTKEHLGLALALSVPVFV-VVTKIDMCPP-------NVLQ 85
S AD ++L G++ TKEH LA L VP + VV K+D P N ++
Sbjct: 107 SQADAAVLVVSAREGEGVMAQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVK 166
Query: 86 DTL-KLLVRILKSPGCRKVPVM 106
D + KLL I G + VP++
Sbjct: 167 DEITKLLTPI----GFKNVPII 184
>sp|P57066|LOLD_VIBCH Lipoprotein-releasing system ATP-binding protein LolD OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=lolD PE=3 SV=1
Length = 228
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 205 VAVVGNVDAGKSTLLGVLTHGELDNGRGHARQKLFRHKHEMESGRTSSVGNDILGF 260
V+++G+ +GKSTLL +L G LD+ + L + H++ S + + + N LGF
Sbjct: 37 VSIIGSSGSGKSTLLHIL--GALDDASEGQVEFLGQSLHQLSSNKQAKIRNQHLGF 90
>sp|B2UAA3|IF2_RALPJ Translation initiation factor IF-2 OS=Ralstonia pickettii (strain
12J) GN=infB PE=3 SV=1
Length = 964
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 45 VGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPN 82
V A+ G++ TKE + A A VP+ V +TK+D N
Sbjct: 544 VAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDKPEAN 581
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,014,925
Number of Sequences: 539616
Number of extensions: 5191591
Number of successful extensions: 22450
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 22337
Number of HSP's gapped (non-prelim): 182
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)