RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15140
         (227 letters)



>d1hi9a_ c.99.1.1 (A:) Zn-dependent D-aminopeptidase DppA {Bacillus
           subtilis [TaxId: 1423]}
          Length = 274

 Score = 29.0 bits (65), Expect = 0.44
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 12  QALNDESKPWAPFLTLAEQKTGVKRIYIVLDSGTMTISEIRENLNQALN--DESKPWAP 68
                E++   P +T A  K  + R  +   S       + E    AL   D+ KP  P
Sbjct: 155 DRAAKEAEELIPNVTTAAVKQTISRSAVKCLSPAKRGRLLTEKTAFALQNKDKVKPLTP 213


>d1g73a_ a.7.4.1 (A:) Smac/diablo {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 157

 Score = 26.0 bits (57), Expect = 3.2
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)

Query: 190 PKFLEHESFINSAFTKATDSAVKF---ATAKILEAEK 223
           P  L  E+ +  A +  TDS        T  ++EA  
Sbjct: 10  PHSLSSEALMRRAVSLVTDSTSTDLSQTTYALIEAIT 46


>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206
          {Streptomyces coelicolor [TaxId: 1902]}
          Length = 200

 Score = 25.8 bits (56), Expect = 4.2
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 1  MTISEIRENLNQALNDESKPWAPFLTLAEQKTGVKRIYIVLDSGTMTISEIRENLNQALN 60
          +T+ E  E   +   D   P  P      + TGV+  +IV            E+ N+   
Sbjct: 15 ITMEETLELARRRHTDH--PQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYE 72

Query: 61 DESKPWA 67
           E+K   
Sbjct: 73 REAKSRV 79


>d1w6ka2 a.102.4.2 (A:100-378) Lanosterol synthase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 279

 Score = 25.2 bits (55), Expect = 6.3
 Identities = 12/55 (21%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 137 WVVFALFSIVEYPAEFILSIFPFYWLIKCIFFI-----WCFAPMENNGSIFIYNR 186
           W  F L  +  Y  E + ++FP  WL            WC          + Y  
Sbjct: 93  WGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAV 147


>d1v0ea1 b.68.1.2 (A:245-760) Endo-alpha-sialidase {Bacteriophage
           K1F [TaxId: 344021]}
          Length = 516

 Score = 25.4 bits (55), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 182 FIYNRII-RPKFLEHESFINSAFTKATDS 209
           F+Y RI  +P +   E F+     K TD+
Sbjct: 50  FVYERIPGQPLYYASEEFVQGELFKITDT 78


>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila
           melanogaster [TaxId: 7227]}
          Length = 106

 Score = 24.1 bits (52), Expect = 9.2
 Identities = 7/61 (11%), Positives = 20/61 (32%), Gaps = 7/61 (11%)

Query: 145 IVEYPAEFILSIFPFYWLIKCIFFI------WCFAPMENNGSIFIYNRIIRPKFLEHESF 198
           +++  A+F   + P  +    +         + F  + +  +  +       +F  H  F
Sbjct: 34  VIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEF-SHPFF 92

Query: 199 I 199
            
Sbjct: 93  K 93


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0418    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 825,801
Number of extensions: 37060
Number of successful extensions: 130
Number of sequences better than 10.0: 1
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 11
Length of query: 227
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 145
Effective length of database: 1,281,736
Effective search space: 185851720
Effective search space used: 185851720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 51 (24.2 bits)