BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15147
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05B21|VGLU1_XENTR Vesicular glutamate transporter 1 OS=Xenopus tropicalis
GN=slc17a7 PE=2 SV=1
Length = 576
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G +I++ RP ++ + +P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 30 GETIELTEEGRPVIKEEKR--QPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|Q1L8X9|VGLU3_DANRE Vesicular glutamate transporter 3 OS=Danio rerio GN=slc17a8 PE=3
SV=2
Length = 590
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 13/54 (24%)
Query: 33 IPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
+ +P+R P P + C L KRY +A L+ +GF ISFG++CNLG A
Sbjct: 55 VAAPKRSP---------PLLDCGCFGLPKRYIIAMLSGLGFCISFGIRCNLGVA 99
>sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a
PE=2 SV=1
Length = 587
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G I++ RP H+ + P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 38 GEVIELTEDGRP--MHMPEKKAPLVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 94
>sp|Q62634|VGLU1_RAT Vesicular glutamate transporter 1 OS=Rattus norvegicus GN=Slc17a7
PE=1 SV=1
Length = 560
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 27 GGPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G ++++ + RP H P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 29 GAETLELSADGRPVTTHTRD--PPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|Q3TXX4|VGLU1_MOUSE Vesicular glutamate transporter 1 OS=Mus musculus GN=Slc17a7 PE=2
SV=2
Length = 560
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 27 GGPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G ++++ + RP H P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 29 GAETLELSADGRPVTTHTRD--PPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|Q6INC8|VGLU1_XENLA Vesicular glutamate transporter 1 OS=Xenopus laevis GN=slc17a7
PE=2 SV=1
Length = 576
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G +I++ +P ++ +K+ +P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 30 GETIELTEEGQPVVKE-EKH-QPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|Q5W8I8|VGL2A_DANRE Vesicular glutamate transporter 2.1 OS=Danio rerio GN=slc17a6b
PE=2 SV=2
Length = 584
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
G +I++ RP I++ P C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 37 GENIELTEDGRPA--QINERKAPLCDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 93
>sp|Q8NDX2|VGLU3_HUMAN Vesicular glutamate transporter 3 OS=Homo sapiens GN=SLC17A8 PE=1
SV=1
Length = 589
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
L KRY +A ++ +GF ISFG++CNLG A
Sbjct: 72 LPKRYIIAIMSGLGFCISFGIRCNLGVA 99
>sp|Q7TSF2|VGLU3_RAT Vesicular glutamate transporter 3 OS=Rattus norvegicus GN=Slc17a8
PE=1 SV=2
Length = 588
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
+ KRY +A ++ +GF ISFG++CNLG A
Sbjct: 72 IPKRYIIAVMSGLGFCISFGIRCNLGVA 99
>sp|Q8BFU8|VGLU3_MOUSE Vesicular glutamate transporter 3 OS=Mus musculus GN=Slc17a8 PE=2
SV=1
Length = 601
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
+ KRY +A ++ +GF ISFG++CNLG A
Sbjct: 85 IPKRYIIAVMSGLGFCISFGIRCNLGVA 112
>sp|A4FV52|VGLU1_BOVIN Vesicular glutamate transporter 1 OS=Bos taurus GN=SLC17A7 PE=2
SV=1
Length = 560
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 50 PEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 50 PVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6
PE=1 SV=1
Length = 582
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 67 LPRRYIIAIMSGLGFCISFGIRCNLGVA 94
>sp|Q8BLE7|VGLU2_MOUSE Vesicular glutamate transporter 2 OS=Mus musculus GN=Slc17a6 PE=1
SV=1
Length = 582
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 67 LPRRYIIAIMSGLGFCISFGIRCNLGVA 94
>sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1
SV=1
Length = 582
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 67 LPRRYIIAIMSGLGFCISFGIRCNLGVA 94
>sp|A6QLI1|VGLU2_BOVIN Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2
SV=1
Length = 582
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 55 LSKRYTMATLTCVGFIISFGMKCNLGFA 82
L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 67 LPRRYIIAIMSGLGFCISFGIRCNLGVA 94
>sp|Q9P2U7|VGLU1_HUMAN Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=1
SV=1
Length = 560
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 50 PEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
P + C L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 50 PVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86
>sp|P34644|EAT4_CAEEL Probable vesicular glutamate transporter eat-4 OS=Caenorhabditis
elegans GN=eat-4 PE=2 SV=2
Length = 576
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 57 KRYTMATLTCVGFIISFGMKCNLGFAK 83
KR+ +A L +GF+ISFG++CN G AK
Sbjct: 68 KRWLLAILANMGFMISFGIRCNFGAAK 94
>sp|Q12407|YD199_YEAST Putative metabolite transport protein YDL199C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YDL199C PE=1
SV=1
Length = 687
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 52 IPCLSKRYTMATLTCVGFII--SFGMKCNLGFAKLQFEGRFP 91
+PC+ KR T+ ++ CV +I SFG+ N F L F R+P
Sbjct: 244 LPCIRKR-TLISIQCVSSVIAYSFGIWINCAFRYLGFAWRYP 284
>sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1
Length = 495
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFA 82
PS +R PL P C S RY +A L+ GF + + ++ NL A
Sbjct: 9 APSDGEEGSDRTPLLQRAPRAEPAPVCCSARYNLAFLSFFGFFVLYSLRVNLSVA 63
>sp|Q10046|YRT3_CAEEL Potential vesicular glutamate transporter T07A5.3
OS=Caenorhabditis elegans GN=T07A5.3 PE=3 SV=1
Length = 544
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 58 RYTMATLTCVGFIISFGMKCNLGFAKLQFEGRF 90
R+ +A L GF ISFG++ N G AK + F
Sbjct: 47 RWQIAILAHFGFAISFGIRSNFGVAKNRMVNNF 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,347,205
Number of Sequences: 539616
Number of extensions: 1708215
Number of successful extensions: 3793
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3771
Number of HSP's gapped (non-prelim): 23
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)