Your job contains 1 sequence.
>psy15151
MSGPATATLEDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQA
QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTST
RQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDI
GGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTF
LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR
TMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI
HSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQ
AKKKANLNYYA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15151
(431 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028684 - symbol:Rpt5 "Regulatory particle triple-... 1955 5.0e-202 1
ZFIN|ZDB-GENE-030131-666 - symbol:psmc3 "proteasome (pros... 1885 1.3e-194 1
UNIPROTKB|F1SID4 - symbol:PSMC3 "Uncharacterized protein"... 1884 1.7e-194 1
UNIPROTKB|P17980 - symbol:PSMC3 "26S protease regulatory ... 1883 2.1e-194 1
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 1882 2.7e-194 1
MGI|MGI:1098754 - symbol:Psmc3 "proteasome (prosome, macr... 1882 2.7e-194 1
RGD|61905 - symbol:Psmc3 "proteasome (prosome, macropain)... 1882 2.7e-194 1
UNIPROTKB|Q6P6U2 - symbol:Psmc3 "26S protease regulatory ... 1882 2.7e-194 1
UNIPROTKB|J9NWA6 - symbol:LOC100687152 "Uncharacterized p... 1851 5.3e-191 1
UNIPROTKB|F1MWE0 - symbol:PSMC3 "Uncharacterized protein"... 1845 2.3e-190 1
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 1839 9.8e-190 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 1765 6.8e-182 1
UNIPROTKB|O76371 - symbol:rpt-5 "Protein RPT-5" species:6... 1765 6.8e-182 1
UNIPROTKB|O42587 - symbol:psmc3-a "26S protease regulator... 1697 1.1e-174 1
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 1682 4.3e-173 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 1663 4.4e-171 1
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 1629 1.8e-167 1
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 1624 6.0e-167 1
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 1622 9.7e-167 1
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 1548 6.8e-159 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 1532 3.3e-157 1
POMBASE|SPAC3A11.12c - symbol:rpt5 "19S proteasome regula... 1515 2.1e-155 1
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 1513 3.5e-155 1
SGD|S000005643 - symbol:RPT5 "ATPase of the 19S regulator... 1511 5.6e-155 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 1500 8.2e-154 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 1500 8.2e-154 1
UNIPROTKB|E9PKD5 - symbol:PSMC3 "26S protease regulatory ... 720 2.0e-134 2
UNIPROTKB|E9PMD8 - symbol:PSMC3 "26S protease regulatory ... 1195 1.7e-121 1
UNIPROTKB|E9PN50 - symbol:PSMC3 "26S protease regulatory ... 699 3.9e-108 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 914 1.0e-91 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 887 7.5e-89 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 882 2.5e-88 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 882 2.5e-88 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 881 3.2e-88 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 881 3.2e-88 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 878 6.7e-88 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 878 6.7e-88 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 878 6.7e-88 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 878 6.7e-88 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 878 6.7e-88 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 878 6.7e-88 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 875 1.4e-87 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 874 1.8e-87 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 872 2.9e-87 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 872 2.9e-87 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 871 3.7e-87 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 869 6.0e-87 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 868 7.7e-87 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 864 2.0e-86 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 818 2.8e-84 2
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 839 9.1e-84 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 836 1.9e-83 1
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 810 5.1e-83 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 830 8.2e-83 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 826 2.2e-82 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 825 2.8e-82 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 824 3.6e-82 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 823 4.5e-82 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 822 5.8e-82 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 822 5.8e-82 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 822 5.8e-82 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 822 5.8e-82 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 822 5.8e-82 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 821 7.4e-82 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 821 7.4e-82 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 820 9.4e-82 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 819 1.2e-81 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 814 4.1e-81 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 813 5.2e-81 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 813 5.2e-81 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 813 5.2e-81 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 812 6.6e-81 1
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 810 1.1e-80 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 810 1.1e-80 1
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 773 2.8e-80 2
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 805 3.7e-80 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 803 6.0e-80 1
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 773 2.5e-79 2
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 773 2.5e-79 2
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 793 6.8e-79 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 790 1.4e-78 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 789 1.8e-78 1
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 786 3.8e-78 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 786 3.8e-78 1
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 785 4.8e-78 1
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 785 4.8e-78 1
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 785 4.8e-78 1
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 785 4.8e-78 1
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 785 4.8e-78 1
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr... 785 4.8e-78 1
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain... 785 4.8e-78 1
UNIPROTKB|E9PS45 - symbol:PSMC3 "26S protease regulatory ... 781 1.3e-77 1
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 780 1.6e-77 1
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 778 2.7e-77 1
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 778 2.7e-77 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 775 5.5e-77 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 774 7.1e-77 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 750 1.4e-76 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 767 3.9e-76 1
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 766 5.0e-76 1
WARNING: Descriptions of 619 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 1955 (693.3 bits), Expect = 5.0e-202, P = 5.0e-202
Identities = 389/425 (91%), Positives = 406/425 (95%)
Query: 8 TLEDSSIWE-GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIR 66
TLED SIWE GEESLG+ ++RMSTD+I SRTRL+DNEIKIMKSEV+RI+HE+QAQNEKI+
Sbjct: 8 TLEDKSIWEDGEESLGEKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIK 67
Query: 67 ENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFL 126
+NTEKIKVNK LPYLVSNVIELLDVDPQ+ E+DG+V LD QRKGKCAVIKTSTRQ YFL
Sbjct: 68 DNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFL 127
Query: 127 PVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQ 186
PVIGLVDAEKLKPGDL GVNKD YLILETLPAEYDARVKAMEVDERPTEQ+SDIGGLDKQ
Sbjct: 128 PVIGLVDAEKLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQ 187
Query: 187 IQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 246
IQELIEAVVLPMTHKEKF NLGI PPKGV+LYGPPGTGKTLLARACAAQTKSTFLKLAGP
Sbjct: 188 IQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGP 247
Query: 247 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 306
QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL
Sbjct: 248 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 307
Query: 307 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 366
NQL+GFSSTADIKVIAATNRVDIL PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN
Sbjct: 308 NQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 366
Query: 367 VSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKAN 426
VS DVN+EELSRSTDDFNGAQCKAVCVEAGMIALRR A VTHEDFMDAIMEVQAKKKAN
Sbjct: 367 VSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKAN 426
Query: 427 LNYYA 431
LNYYA
Sbjct: 427 LNYYA 431
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 1885 (668.6 bits), Expect = 1.3e-194, P = 1.3e-194
Identities = 365/426 (85%), Positives = 397/426 (93%)
Query: 7 ATLEDSSIW-EGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKI 65
++L D S+W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI
Sbjct: 2 SSLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 61
Query: 66 RENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ENTEKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYF
Sbjct: 62 KENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYF 121
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
LPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDK
Sbjct: 122 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDK 181
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAG
Sbjct: 182 QIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 241
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
PQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLEL
Sbjct: 242 PQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 301
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
LNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKM
Sbjct: 302 LNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 361
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKA 425
NV PDVN+EEL+R TDDFNGAQCKAVCVEAGMIALRRGA + HED+M+ I+EVQAKKKA
Sbjct: 362 NVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKA 421
Query: 426 NLNYYA 431
NL YYA
Sbjct: 422 NLQYYA 427
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 1884 (668.3 bits), Expect = 1.7e-194, P = 1.7e-194
Identities = 366/433 (84%), Positives = 400/433 (92%)
Query: 1 MSGPATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHEL 58
+ P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HEL
Sbjct: 14 LESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHEL 73
Query: 59 QAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKT 118
QA +KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKT
Sbjct: 74 QAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKT 133
Query: 119 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYS 178
STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYS
Sbjct: 134 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYS 193
Query: 179 DIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKS 238
DIGGLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+
Sbjct: 194 DIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 253
Query: 239 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 298
TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREV
Sbjct: 254 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREV 313
Query: 299 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 358
QRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIM
Sbjct: 314 QRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIM 373
Query: 359 QIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIME 418
QIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+E
Sbjct: 374 QIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILE 433
Query: 419 VQAKKKANLNYYA 431
VQAKKKANL YYA
Sbjct: 434 VQAKKKANLQYYA 446
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 1883 (667.9 bits), Expect = 2.1e-194, P = 2.1e-194
Identities = 366/433 (84%), Positives = 400/433 (92%)
Query: 1 MSGPATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHEL 58
+ P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HEL
Sbjct: 7 IESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHEL 66
Query: 59 QAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKT 118
QA +KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKT
Sbjct: 67 QAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKT 126
Query: 119 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYS 178
STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYS
Sbjct: 127 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYS 186
Query: 179 DIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKS 238
DIGGLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+
Sbjct: 187 DIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
Query: 239 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 298
TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREV
Sbjct: 247 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREV 306
Query: 299 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 358
QRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIM
Sbjct: 307 QRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIM 366
Query: 359 QIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIME 418
QIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+E
Sbjct: 367 QIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILE 426
Query: 419 VQAKKKANLNYYA 431
VQAKKKANL YYA
Sbjct: 427 VQAKKKANLQYYA 439
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 366/430 (85%), Positives = 399/430 (92%)
Query: 4 PATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQ 61
P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA
Sbjct: 10 PVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAM 69
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTR 121
+KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTR
Sbjct: 70 KDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTR 129
Query: 122 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIG 181
QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIG
Sbjct: 130 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 189
Query: 182 GLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 241
GLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFL
Sbjct: 190 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 249
Query: 242 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 301
KLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRT
Sbjct: 250 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 309
Query: 302 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
MLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIH
Sbjct: 310 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH 369
Query: 362 SRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA 421
SRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+EVQA
Sbjct: 370 SRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 429
Query: 422 KKKANLNYYA 431
KKKANL YYA
Sbjct: 430 KKKANLQYYA 439
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 366/430 (85%), Positives = 399/430 (92%)
Query: 4 PATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQ 61
P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA
Sbjct: 13 PVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAM 72
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTR 121
+KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTR
Sbjct: 73 KDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTR 132
Query: 122 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIG 181
QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIG
Sbjct: 133 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 192
Query: 182 GLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 241
GLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFL
Sbjct: 193 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 252
Query: 242 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 301
KLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRT
Sbjct: 253 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 312
Query: 302 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
MLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIH
Sbjct: 313 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH 372
Query: 362 SRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA 421
SRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+EVQA
Sbjct: 373 SRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 432
Query: 422 KKKANLNYYA 431
KKKANL YYA
Sbjct: 433 KKKANLQYYA 442
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 366/430 (85%), Positives = 399/430 (92%)
Query: 4 PATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQ 61
P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA
Sbjct: 10 PVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAM 69
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTR 121
+KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTR
Sbjct: 70 KDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTR 129
Query: 122 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIG 181
QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIG
Sbjct: 130 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 189
Query: 182 GLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 241
GLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFL
Sbjct: 190 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 249
Query: 242 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 301
KLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRT
Sbjct: 250 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 309
Query: 302 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
MLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIH
Sbjct: 310 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH 369
Query: 362 SRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA 421
SRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+EVQA
Sbjct: 370 SRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 429
Query: 422 KKKANLNYYA 431
KKKANL YYA
Sbjct: 430 KKKANLQYYA 439
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 366/430 (85%), Positives = 399/430 (92%)
Query: 4 PATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQ 61
P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA
Sbjct: 13 PVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAM 72
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTR 121
+KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTR
Sbjct: 73 KDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTR 132
Query: 122 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIG 181
QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIG
Sbjct: 133 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 192
Query: 182 GLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 241
GLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFL
Sbjct: 193 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 252
Query: 242 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 301
KLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRT
Sbjct: 253 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 312
Query: 302 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
MLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIH
Sbjct: 313 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH 372
Query: 362 SRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA 421
SRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA +THED+M+ I+EVQA
Sbjct: 373 SRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 432
Query: 422 KKKANLNYYA 431
KKKANL YYA
Sbjct: 433 KKKANLQYYA 442
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 1851 (656.6 bits), Expect = 5.3e-191, P = 5.3e-191
Identities = 359/422 (85%), Positives = 392/422 (92%)
Query: 12 SSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENT 69
+++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+
Sbjct: 13 ATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENS 72
Query: 70 EKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVI 129
EKIKVNK LPYLVSNVIELLDV P D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVI
Sbjct: 73 EKIKVNKTLPYLVSNVIELLDVHPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 132
Query: 130 GLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQE 189
GLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQE
Sbjct: 133 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 192
Query: 190 LIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 249
L+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLV
Sbjct: 193 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 252
Query: 250 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 309
QMFIGDGAKLVRDAFALAKEKAP+IIFIDELDA GTKRFDSEKAGDREVQRTMLELLNQL
Sbjct: 253 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLNQL 312
Query: 310 DGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSP 369
DGF +KVIAATNRVDILDPALLRSGRLD+KIEFP PNEEARARIMQIHSRKMNVSP
Sbjct: 313 DGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMNVSP 372
Query: 370 DVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNY 429
DVNYEEL+R DDFNGAQCKAVCVEAGMIALRRG +THED+M+ I+EVQAKKKANL Y
Sbjct: 373 DVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYMEGILEVQAKKKANLQY 432
Query: 430 YA 431
YA
Sbjct: 433 YA 434
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 1845 (654.5 bits), Expect = 2.3e-190, P = 2.3e-190
Identities = 366/449 (81%), Positives = 400/449 (89%)
Query: 1 MSGPATATLEDSSIW-EGEES-LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHEL 58
+ P T + +++W E E+ +G+++L+MST++I RTRLLD+EIKIMKSEV+R++HEL
Sbjct: 8 LESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHEL 67
Query: 59 QAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKT 118
QA +KI+EN+EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKT
Sbjct: 68 QAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKT 127
Query: 119 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYS 178
STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYS
Sbjct: 128 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYS 187
Query: 179 DIGGLDKQIQE----------------LIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
DIGGLDKQIQE L+EA+VLPM HKEKF NLGIQPPKGVL+YGPPG
Sbjct: 188 DIGGLDKQIQEVREARHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 247
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDA
Sbjct: 248 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 307
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
IGTKRFDSEKAGDREVQRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDR
Sbjct: 308 IGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 367
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
KIEFP PNEEARARIMQIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRR
Sbjct: 368 KIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 427
Query: 403 GAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
GA +THED+M+ I+EVQAKKKANL YYA
Sbjct: 428 GATELTHEDYMEGILEVQAKKKANLQYYA 456
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 1839 (652.4 bits), Expect = 9.8e-190, P = 9.8e-190
Identities = 357/404 (88%), Positives = 382/404 (94%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 147
LLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK
Sbjct: 61 LLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 120
Query: 148 DSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNL 207
DSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKEKF NL
Sbjct: 121 DSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENL 180
Query: 208 GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALA 267
GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAF+LA
Sbjct: 181 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLA 240
Query: 268 KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRV 327
KEKAP+IIFIDELDAIG KRFDSEKAGDREVQRTMLELLNQLDGF T +KVIAATNRV
Sbjct: 241 KEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRV 300
Query: 328 DILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQ 387
DILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNVSPDVNYEEL+R TDDFNGAQ
Sbjct: 301 DILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQ 360
Query: 388 CKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
CKAVCVEAG+IALRRGA +THED+M+ I+EVQAKKKANL YYA
Sbjct: 361 CKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1765 (626.4 bits), Expect = 6.8e-182, P = 6.8e-182
Identities = 345/416 (82%), Positives = 382/416 (91%)
Query: 16 EGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVN 75
E E+++ ++IL+MST+D+ SRT LLDNEI+IM+SEV RI+H E+I+ENTE+IKVN
Sbjct: 17 EVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVN 76
Query: 76 KNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAE 135
K LPYLVSNV+ELLD++ +TEE+GA VDLDAQ K KCAVIKTSTR TYFLPV+GLVD +
Sbjct: 77 KTLPYLVSNVVELLDLE-DNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPD 134
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
+LKPGDLVGVNKDSYLILE LPAEYD+RVKAMEVDERPTEQYSDIGG DKQIQELIEAVV
Sbjct: 135 ELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVV 194
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
LPMTHK++FVNLGI PPKGVL+YGPPGTGKT++ARA AAQTKSTFLKLAGPQLVQMFIGD
Sbjct: 195 LPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGD 254
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF
Sbjct: 255 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 314
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
DIKVIAATNR+D+LDPALLRSGRLDRKIE PHPNE+ARARIMQIHSRKMNV+ DVN+EE
Sbjct: 315 DDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEE 374
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
L+R TDDFNGAQCKAVCVEAGMIALRR A + HEDFMDAI+EVQAKKKA+LNYYA
Sbjct: 375 LARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1765 (626.4 bits), Expect = 6.8e-182, P = 6.8e-182
Identities = 345/416 (82%), Positives = 382/416 (91%)
Query: 16 EGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVN 75
E E+++ ++IL+MST+D+ SRT LLDNEI+IM+SEV RI+H E+I+ENTE+IKVN
Sbjct: 17 EVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVN 76
Query: 76 KNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAE 135
K LPYLVSNV+ELLD++ +TEE+GA VDLDAQ K KCAVIKTSTR TYFLPV+GLVD +
Sbjct: 77 KTLPYLVSNVVELLDLE-DNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPD 134
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
+LKPGDLVGVNKDSYLILE LPAEYD+RVKAMEVDERPTEQYSDIGG DKQIQELIEAVV
Sbjct: 135 ELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVV 194
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
LPMTHK++FVNLGI PPKGVL+YGPPGTGKT++ARA AAQTKSTFLKLAGPQLVQMFIGD
Sbjct: 195 LPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGD 254
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF
Sbjct: 255 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 314
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
DIKVIAATNR+D+LDPALLRSGRLDRKIE PHPNE+ARARIMQIHSRKMNV+ DVN+EE
Sbjct: 315 DDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEE 374
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
L+R TDDFNGAQCKAVCVEAGMIALRR A + HEDFMDAI+EVQAKKKA+LNYYA
Sbjct: 375 LARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 336/395 (85%), Positives = 361/395 (91%)
Query: 12 SSIWEGEES--LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENT 69
+SIWE E+ LG+++L+MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+
Sbjct: 2 ASIWEETEADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENS 61
Query: 70 EKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVI 129
EKIKVNK LPYLVSNVIELLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVI
Sbjct: 62 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 121
Query: 130 GLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQE 189
GLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQE
Sbjct: 122 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 181
Query: 190 LIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 249
L+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLV
Sbjct: 182 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 241
Query: 250 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 309
QMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL
Sbjct: 242 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 301
Query: 310 DGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSP 369
DGF +KVIAATNRVDILDPALLRSGRLDRKIEFP PNEEARARIMQIHSRKMNVSP
Sbjct: 302 DGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSP 361
Query: 370 DVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
DVNYEEL+R K VEAGMIALRRGA
Sbjct: 362 DVNYEELARCPTISMALSAKQFGVEAGMIALRRGA 396
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 1682 (597.2 bits), Expect = 4.3e-173, P = 4.3e-173
Identities = 326/428 (76%), Positives = 374/428 (87%)
Query: 5 ATATLEDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEK 64
AT +ED+S +E D + MST+DI TRLLDNEI+I+K + R + E + EK
Sbjct: 2 ATPMVEDTSSFEE-----DQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEK 56
Query: 65 IRENTEKIKVNKNLPYLVSNVIELLDVDPQD-TEEDGAVVDLDAQRKGKCAVIKTSTRQT 123
I+EN EKIK+NK LPYLV N++E+L+++P+D EEDGA +DLD+QRKGKC V+KTSTRQT
Sbjct: 57 IKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQT 116
Query: 124 YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGL 183
FLPV+GLVD + LKPGDLVGVNKDSYLIL+TLP+EYD+RVKAMEVDE+PTE Y+DIGGL
Sbjct: 117 IFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGL 176
Query: 184 DKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKL 243
+KQIQEL+EA+VLPMTHKE+F LG++PPKGVLLYGPPGTGKTL+ARACAAQT +TFLKL
Sbjct: 177 EKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKL 236
Query: 244 AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML 303
AGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +GDREVQRTML
Sbjct: 237 AGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML 296
Query: 304 ELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 363
ELLNQLDGFSS IKVIAATNR DILDPAL+RSGRLDRKIEFPHP EEARARI+QIHSR
Sbjct: 297 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 356
Query: 364 KMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKK 423
KMNV PDVN+EEL+RSTDDFNGAQ KAVCVEAGM+ALRR A V HEDF + I++VQAKK
Sbjct: 357 KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416
Query: 424 KANLNYYA 431
KA+LNYYA
Sbjct: 417 KASLNYYA 424
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 1663 (590.5 bits), Expect = 4.4e-171, P = 4.4e-171
Identities = 325/428 (75%), Positives = 374/428 (87%)
Query: 5 ATATLEDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEK 64
ATA ED+S +EG D + M+TDDI +RLL NEI+I+K E R + +L++ EK
Sbjct: 2 ATAMAEDTS-FEG-----DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEK 55
Query: 65 IRENTEKIKVNKNLPYLVSNVIELLDVDPQD-TEEDGAVVDLDAQRKGKCAVIKTSTRQT 123
I+EN EKIK+NK LPYLV N++E+L++ P+D EEDGA +DLD+QRKGKC V+KTSTRQT
Sbjct: 56 IKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQT 115
Query: 124 YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGL 183
FLPV+GLVD + LKPGDLVGVNKDSYLIL+TLP+EYD+RVKAMEVDE+PTE Y+DIGGL
Sbjct: 116 IFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGL 175
Query: 184 DKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKL 243
+KQIQEL+EA+VLPMTHKE+F LGI+PPKGVLLYGPPGTGKTL+ARACAAQT +TFLKL
Sbjct: 176 EKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKL 235
Query: 244 AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML 303
AGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTML
Sbjct: 236 AGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML 295
Query: 304 ELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 363
ELLNQLDGFSS IKVIAATNR DILDPAL+RSGRLDRKIEFPHP EEAR RI+QIHSR
Sbjct: 296 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSR 355
Query: 364 KMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKK 423
KMNV+ DVN+EEL+RSTDDFNGAQ KAVCVEAGM+ALRR A V HEDF + I++VQAKK
Sbjct: 356 KMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415
Query: 424 KANLNYYA 431
KA+LNYYA
Sbjct: 416 KASLNYYA 423
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 325/396 (82%), Positives = 351/396 (88%)
Query: 39 LLDN-EIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPY--LVSNVIELLDVDPQD 95
LL N E + + E M + +A+ + I E K+ + + L+ + I+LLDVDP D
Sbjct: 3 LLPNIESPVTRQEKMATVWD-EAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKLLDVDPND 61
Query: 96 TEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 155
EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET
Sbjct: 62 QEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 121
Query: 156 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGV 215
LP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGV
Sbjct: 122 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 181
Query: 216 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 275
L+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+II
Sbjct: 182 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSII 241
Query: 276 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 335
FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF +KVIAATNRVDILDPALL
Sbjct: 242 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALL 301
Query: 336 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEA 395
RSGRLDRKIEFP PNEEARARIMQIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEA
Sbjct: 302 RSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 361
Query: 396 GMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
GMIALRRGA +THED+M+ I+EVQAKKKANL YYA
Sbjct: 362 GMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 397
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 323/389 (83%), Positives = 352/389 (90%)
Query: 45 KIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDP--QDTEEDGAV 102
+IMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE V Q+ E G+
Sbjct: 2 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQEGEGIGSP 61
Query: 103 VDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDA 162
+ +++K + + T++ QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+
Sbjct: 62 LIYTSRKKEENGLELTNS-QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDS 120
Query: 163 RVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPG
Sbjct: 121 RVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 180
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDA
Sbjct: 181 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 240
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
IGTKRFDSEKAGDREVQRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDR
Sbjct: 241 IGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 300
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
KIEFP PNEEARARIMQIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRR
Sbjct: 301 KIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 360
Query: 403 GAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
GA +THED+M+ I+EVQAKKKANL YYA
Sbjct: 361 GATELTHEDYMEGILEVQAKKKANLQYYA 389
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 322/387 (83%), Positives = 345/387 (89%)
Query: 45 KIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD 104
+IMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE V E +G
Sbjct: 1 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQEGEGIGSP 60
Query: 105 LDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARV 164
L +C + S +TYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP EYD+RV
Sbjct: 61 LVIGDMARCQTVYDS--ETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRV 118
Query: 165 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
KAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTG
Sbjct: 119 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 178
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIG
Sbjct: 179 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 238
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
TKRFDSEKAGDREVQRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDRKI
Sbjct: 239 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 298
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
EFP PNEEARARIMQIHSRKMNVSPDVNYEEL+R TDDFNGAQCKAVCVEAGMIALRRGA
Sbjct: 299 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 358
Query: 405 AIVTHEDFMDAIMEVQAKKKANLNYYA 431
+THED+M+ I+EVQAKKKANL YYA
Sbjct: 359 TELTHEDYMEGILEVQAKKKANLQYYA 385
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 1548 (550.0 bits), Expect = 6.8e-159, P = 6.8e-159
Identities = 302/417 (72%), Positives = 356/417 (85%)
Query: 16 EGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVN 75
E ++ L ++IL ST DI R R+L+NE++IMKSE R++HE EK+++N EKI+ N
Sbjct: 48 EDDDLLDEEILNSSTADIIKRRRMLENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENN 107
Query: 76 KNLPYLVSNVIELLDVDPQ-DTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDA 134
+ LPYLV NV+ELLD+D + + E+GA +DLDA R GK AVIKTSTRQT +LP+IGLVD
Sbjct: 108 RQLPYLVGNVVELLDLDVEAEAAEEGANIDLDATRVGKSAVIKTSTRQTIYLPLIGLVDH 167
Query: 135 EKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAV 194
EKLKPGDL+GVNKDSYLIL+TLPAEYD RVKAMEVDE+PTE+Y+DIGGLDKQI+E++EA+
Sbjct: 168 EKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAI 227
Query: 195 VLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIG 254
V PM E+F LGI+ PKG L+YGPPGTGKTLLARACAA+T +TFLKLAGPQLVQMFIG
Sbjct: 228 VWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIG 287
Query: 255 DGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSS 314
DGAKLVRD FALAKEKAP+IIFIDELDA+GTKRFDSEK+GDREVQRTMLELLNQLDGF+S
Sbjct: 288 DGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFAS 347
Query: 315 TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYE 374
IKV+AATNRVD+LDPALLRSGRLDRKIEFP PNEEARA I+QIHSRKM V VN+
Sbjct: 348 DDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKMTVEDSVNWA 407
Query: 375 ELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK-ANLNYY 430
EL+RSTD+F GAQ KAVCVEAGMIALR+G + + HE+++DAI EVQAKKK N+ Y
Sbjct: 408 ELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQAKKKDTNMGIY 464
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
Identities = 304/428 (71%), Positives = 362/428 (84%)
Query: 8 TLED-SSIWEGEESLGD-DILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKI 65
TLED + + EE++ D +IL ST DI +RT+LLDN+IK+M+SE R++HE E+I
Sbjct: 27 TLEDLENNQQQEENVIDQEILNSSTSDIINRTKLLDNDIKVMRSESQRLNHEKTVMLERI 86
Query: 66 RENTEKIKVNKNLPYLVSNVIELLDVDP-QDTEEDGAVVDLDAQRKGKCAVIKTSTRQTY 124
++N EKI NK LPYLV NV+ELL++D ++ E GA +D+DA R GK AVIKTSTRQT
Sbjct: 87 KDNQEKINNNKQLPYLVGNVVELLNLDADKEASEQGANIDIDAARAGKSAVIKTSTRQTI 146
Query: 125 FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLD 184
FLP+IGLVD KLKP DL+GVNKDSYL+L+TLP+EYD+RVKAMEVDE+PTE YSDIGGLD
Sbjct: 147 FLPMIGLVDPSKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLD 206
Query: 185 KQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 244
KQI+ELIEAVVLPM +KF NLGI+PPKG L+YGPPGTGKTLLARACAAQ+ +TFLKLA
Sbjct: 207 KQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLA 266
Query: 245 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 304
PQLVQMFIGDGAKLVRDAFALAKEKAP IIFIDELDAIGTKRFDS+K+GDREVQRTMLE
Sbjct: 267 APQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLE 326
Query: 305 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 364
LLNQLDGF S +KV+AATNRVD LDPALLRSGRLDRKIEFP P+EEAR +++IH+RK
Sbjct: 327 LLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARK 386
Query: 365 MNVSPD-VNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKK 423
++ + VN+ EL+RSTD+FNGAQ KAV VEAGMIALR G +I+ HEDF++AI EVQA+K
Sbjct: 387 LHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQARK 446
Query: 424 KANLNYYA 431
++N+YA
Sbjct: 447 SKSVNFYA 454
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 1515 (538.4 bits), Expect = 2.1e-155, P = 2.1e-155
Identities = 295/421 (70%), Positives = 351/421 (83%)
Query: 12 SSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEK 71
SS EG + + +IL D++NSRTRLL+N+IK+MKSE R++HE EKI+EN EK
Sbjct: 18 SSNNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEK 77
Query: 72 IKVNKNLPYLVSNVIELLDVDPQDTE-EDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIG 130
I NK LPYLV NV+E+LD+ P + + ++ A + +A R GK AVIKTSTRQT FLP+IG
Sbjct: 78 ISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIG 137
Query: 131 LVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQEL 190
LV+ E+L PGDL+GVNKDSYLI++ LP+EYD+RVKAMEVDE+PTE+YSDIGGL KQI+EL
Sbjct: 138 LVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEEL 197
Query: 191 IEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 250
EA+VLPM +KF LG++PPKG L++GPPGTGKTLLARACAAQ+ +TFLKLA PQLVQ
Sbjct: 198 FEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQ 257
Query: 251 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 310
MFIGDGAKLVRDAFALAKEK+PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD
Sbjct: 258 MFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 317
Query: 311 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 370
GFSS +KVIAATNRVD LDPALLRSGRLDRK+EFP PNEEAR I++IHSRKM + D
Sbjct: 318 GFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDD 377
Query: 371 VNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYY 430
+N+EEL+RSTD++NGA K+VCVEAGMIALR+G + HE FMD I+EVQ +K L Y+
Sbjct: 378 INWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYF 437
Query: 431 A 431
A
Sbjct: 438 A 438
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 297/433 (68%), Positives = 361/433 (83%)
Query: 1 MSGPATATLEDSSIWEGEES--LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHEL 58
MS T T +D S+ + E+ + D+I +M+ D++N + +LL+NE K+++SE + E+
Sbjct: 1 MSNKRTTT-KDESLPQAEKEAVIPDEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEM 59
Query: 59 QAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKT 118
+ ++I+EN +K++VN LP+LV+NV+E++D+ V+D + Q KC V+K
Sbjct: 60 DSIQKRIKENNDKLQVNTQLPHLVANVVEIIDM----------VLDGETQ-PSKCVVVKA 108
Query: 119 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYS 178
STRQT FL G+VD +KL+PGDLVG+NKDSY+IL+TLP EYD+RVKAME+DE+PTE+YS
Sbjct: 109 STRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYS 168
Query: 179 DIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKS 238
DIGGLDKQIQEL+EAVVLPMTHKE+F ++GI+PPKGVL+YGPPGTGKTLLARACAAQT S
Sbjct: 169 DIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNS 228
Query: 239 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 298
T+LKLAGPQLVQMFIGDGAKLVRDAFALAKEK P IIFIDELDAIGTKRFDSE +GDREV
Sbjct: 229 TYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREV 288
Query: 299 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 358
QRTMLELLNQLDGFSS A+IKVIAATNR+DILDPALLRSGRLDRKIEFP PNEEARA I+
Sbjct: 289 QRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHIL 348
Query: 359 QIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIME 418
QIHSRKMNVS DVN++EL+RS++DFNGAQ KAVCVEAGMIALRRG + H DF++ +E
Sbjct: 349 QIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVE 408
Query: 419 VQAKKKANLNYYA 431
V AKKK L YYA
Sbjct: 409 VMAKKKKTLEYYA 421
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 294/433 (67%), Positives = 363/433 (83%)
Query: 7 ATLE--DSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEK 64
ATLE D+ G++ L +IL +ST ++ +R +LLDNEI+I +SE+ R+SHE EK
Sbjct: 2 ATLEELDAQTLPGDDELDQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEK 61
Query: 65 IRENTEKIKVNKNLPYLVSNVIELLDV----DPQDTEE--DGAVVDLDAQRKGKCAVIKT 118
I++N EKIK N+ LPYLV+NV+E++D+ D +++E G V+LD GK AV+KT
Sbjct: 62 IKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKT 121
Query: 119 STRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYS 178
S+RQT FLP++GLVD +KLKP DLVGVNKDSYLIL+TLP+E+D+RVKAMEVDE+PTE YS
Sbjct: 122 SSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYS 181
Query: 179 DIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKS 238
D+GGLDKQI+EL+EA+VLPM +KF ++GI+ PKG L+YGPPGTGKTLLARACAAQT +
Sbjct: 182 DVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNA 241
Query: 239 TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 298
TFLKLA PQLVQM+IG+GAKLVRDAFALAKEKAP IIFIDELDAIGTKRFDSEK+GDREV
Sbjct: 242 TFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREV 301
Query: 299 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 358
QRTMLELLNQLDGFSS +KV+AATNRVD+LDPALLRSGRLDRKIEFP P+E++RA+I+
Sbjct: 302 QRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQIL 361
Query: 359 QIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIME 418
QIHSRKM D+N++EL+RSTD+FNGAQ KAV VEAGMIALR G + V HEDF++ I E
Sbjct: 362 QIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISE 421
Query: 419 VQAKKKANLNYYA 431
VQA+K ++++YA
Sbjct: 422 VQARKSKSVSFYA 434
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 297/434 (68%), Positives = 355/434 (81%)
Query: 13 SIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKI 72
+I+ EE ++I ++S +I +R L+D EIKI+K+E R+ +E + EKI++N EKI
Sbjct: 5 NIFGNEEVNVEEIEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKI 64
Query: 73 KVNKNLPYLVSNVIELLDVDPQDTEED----------------GAVVDLDAQRKGKCAVI 116
+NK LPYLV+NV+E LD++ ++ E + D+D +++GKC VI
Sbjct: 65 HLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVI 124
Query: 117 KTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 176
KTSTRQT FLPV GL+DA +LKPGDLVGVNKDSYLI++ LP EYD RVKAMEV E+P+E
Sbjct: 125 KTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSED 184
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
YSDIGGLDKQI++L+EA+VLPM HKEKF +GI+PPKGVL++GPPGTGKTLLARACA+QT
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+TFLKLAGPQLVQMFIGDGAK+VRDAF LAKEKAPAIIFIDELDAIGTKRFDSE +GDR
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
EVQRTMLELLNQLDGFS+ +KVIAATNR D LDPALLRSGRLDRKIE PHPNEE+RAR
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAI 416
I+QIHSRKMNV DVN+EEL+RSTDDFNGAQ KAVCVEAGMIALRRGA + HEDF++ I
Sbjct: 365 ILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGI 424
Query: 417 MEVQAKKKANLNYY 430
V +KKK+ LNY+
Sbjct: 425 TSVLSKKKSTLNYF 438
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 297/434 (68%), Positives = 355/434 (81%)
Query: 13 SIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKI 72
+I+ EE ++I ++S +I +R L+D EIKI+K+E R+ +E + EKI++N EKI
Sbjct: 5 NIFGNEEVNVEEIEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKI 64
Query: 73 KVNKNLPYLVSNVIELLDVDPQDTEED----------------GAVVDLDAQRKGKCAVI 116
+NK LPYLV+NV+E LD++ ++ E + D+D +++GKC VI
Sbjct: 65 HLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVI 124
Query: 117 KTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 176
KTSTRQT FLPV GL+DA +LKPGDLVGVNKDSYLI++ LP EYD RVKAMEV E+P+E
Sbjct: 125 KTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSED 184
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
YSDIGGLDKQI++L+EA+VLPM HKEKF +GI+PPKGVL++GPPGTGKTLLARACA+QT
Sbjct: 185 YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQT 244
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+TFLKLAGPQLVQMFIGDGAK+VRDAF LAKEKAPAIIFIDELDAIGTKRFDSE +GDR
Sbjct: 245 NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDR 304
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
EVQRTMLELLNQLDGFS+ +KVIAATNR D LDPALLRSGRLDRKIE PHPNEE+RAR
Sbjct: 305 EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRAR 364
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAI 416
I+QIHSRKMNV DVN+EEL+RSTDDFNGAQ KAVCVEAGMIALRRGA + HEDF++ I
Sbjct: 365 ILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGI 424
Query: 417 MEVQAKKKANLNYY 430
V +KKK+ LNY+
Sbjct: 425 TSVLSKKKSTLNYF 438
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 720 (258.5 bits), Expect = 2.0e-134, Sum P(2) = 2.0e-134
Identities = 145/170 (85%), Positives = 153/170 (90%)
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
PTE S + + EL+EA+VLPM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARAC
Sbjct: 130 PTEYDSRVKAM-----ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARAC 184
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
AAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP+IIFIDELDAIGTKRFDSEK
Sbjct: 185 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 244
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
AGDREVQRTMLELLNQLDGF +KVIAATNRVDILDPALLRSGRLDR
Sbjct: 245 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 618 (222.6 bits), Expect = 2.0e-134, Sum P(2) = 2.0e-134
Identities = 121/144 (84%), Positives = 134/144 (93%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 147
LLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK
Sbjct: 61 LLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 120
Query: 148 DSYLILETLPAEYDARVKAMEVDE 171
DSYLILETLP EYD+RVKAME+ E
Sbjct: 121 DSYLILETLPTEYDSRVKAMELVE 144
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 232/260 (89%), Positives = 249/260 (95%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 147
LLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK
Sbjct: 61 LLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 120
Query: 148 DSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNL 207
DSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKEKF NL
Sbjct: 121 DSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENL 180
Query: 208 GIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALA 267
GIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDGAKLVRDAFALA
Sbjct: 181 GIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 240
Query: 268 KEKAPAIIFIDELDAIGTKR 287
KEKAP+IIFIDELDAIGTKR
Sbjct: 241 KEKAPSIIFIDELDAIGTKR 260
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 699 (251.1 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 136/151 (90%), Positives = 143/151 (94%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
+K GVNKDSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VL
Sbjct: 89 IKTSTRQGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVL 148
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
PM HKEKF NLGIQPPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAGPQLVQMFIGDG
Sbjct: 149 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 208
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
AKLVRDAFALAKEKAP+IIFIDELDAIGTKR
Sbjct: 209 AKLVRDAFALAKEKAPSIIFIDELDAIGTKR 239
Score = 390 (142.3 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 76/95 (80%), Positives = 87/95 (91%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQ 122
LLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQ
Sbjct: 61 LLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQ 95
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 188/398 (47%), Positives = 269/398 (67%)
Query: 32 DINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDV 91
+IN + L ++ +K E RI+ EL+++ K+ ++++ +NL + N I ++
Sbjct: 27 EINDNSNLKNDLLKEELQEKARIA-ELESRILKLELEKKELE-RENLQLMKENEILRREL 84
Query: 92 DPQDTEE--DGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDS 149
D G VVD +RK V+K+ST ++ + V V+ + L PG V +N+ +
Sbjct: 85 DRMRVPPLIVGTVVDKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQT 141
Query: 150 YLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGI 209
+++ LP D R KAMEVDERP +Y DIGGL+KQ+QE+ E V LP+ H E F +GI
Sbjct: 142 LTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGI 201
Query: 210 QPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 269
+PPKG+LLYGPPGTGKTLLA+A A +T +TF+++ G +LV+ FIG+GA LV+D F LAKE
Sbjct: 202 EPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKE 261
Query: 270 KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDI 329
KAP+IIFIDE+DAI KR D+ GDREVQRT+++LL ++DGF + D+K+I ATNR DI
Sbjct: 262 KAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDI 321
Query: 330 LDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCK 389
LDPA+LR GR DR IE P P+E+ R I++IH+RKMN++ DVN EE+++ T+ GA+ K
Sbjct: 322 LDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELK 381
Query: 390 AVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANL 427
A+C EAGM A+R VT +DF A+ ++ KKK +
Sbjct: 382 AICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKV 419
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 186/398 (46%), Positives = 263/398 (66%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
M + TR +K++K E RI L ++E IR N E++K P N E
Sbjct: 46 MKLPQVTPHTRC---RLKLLKLE--RIKDYLMMEDEFIR-NQERLK-----PQDEKNEEE 94
Query: 88 LLDVDP-QDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 146
VD + T +V +L+ A++ TS +++ ++ VD ++L+PG V +N
Sbjct: 95 RSKVDDLRGTPM--SVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLN 152
Query: 147 KDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVN 206
+ ++ L + D V M++++ P E Y+DIGGLD QIQE+ E+V LP+TH E +
Sbjct: 153 HKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEE 212
Query: 207 LGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFAL 266
+GI+PPKGV+LYGPPGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +
Sbjct: 213 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRV 272
Query: 267 AKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNR 326
A+E AP+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR
Sbjct: 273 AEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNR 332
Query: 327 VDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGA 386
++ LDPAL+R GR+DRKIEFP P+E+ + RI IH+ +M ++ DVN EL + DD +GA
Sbjct: 333 IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGA 392
Query: 387 QCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK 424
KA+C EAG++ALR VT+EDF + V +KK
Sbjct: 393 DIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 180/384 (46%), Positives = 258/384 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E I N E+IK + + Y+ + +L P G +
Sbjct: 69 LKLLKLE--RIKDYLLLEEEYIT-NQEQIKSSDDKNYVKLKIDDLRG-SPVSV---GTLE 121
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
+L + G +I TS Y++ ++ VD + L+PG V +N + ++ L E D
Sbjct: 122 ELIDENHG---IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPL 178
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI+PPKGV+LYGPPGT
Sbjct: 179 VSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A +T +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+
Sbjct: 239 GKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAV 298
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+++ G+RE+QRTMLELLNQLDGF S D+KVI ATNR+D LDPAL+R GR+DRK
Sbjct: 299 GTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRK 358
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
I+ P+P+ + + RI QIH+ KM +SPDV+ EE S D+ +GA KA+C EAG++ALR
Sbjct: 359 IQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Query: 404 AAIVTHEDFMDAIMEVQAKKKANL 427
+T D A + +KK N+
Sbjct: 419 RMKITQADLRKARDKALFQKKGNI 442
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 180/384 (46%), Positives = 258/384 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E I N E+IK + + Y+ + +L P G +
Sbjct: 69 LKLLKLE--RIKDYLLLEEEYIT-NQEQIKSSDDKNYVKLKIDDLRG-SPVSV---GTLE 121
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
+L + G +I TS Y++ ++ VD + L+PG V +N + ++ L E D
Sbjct: 122 ELIDENHG---IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPL 178
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI+PPKGV+LYGPPGT
Sbjct: 179 VSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGT 238
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A +T +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+
Sbjct: 239 GKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAV 298
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+++ G+RE+QRTMLELLNQLDGF S D+KVI ATNR+D LDPAL+R GR+DRK
Sbjct: 299 GTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRK 358
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
I+ P+P+ + + RI QIH+ KM +SPDV+ EE S D+ +GA KA+C EAG++ALR
Sbjct: 359 IQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Query: 404 AAIVTHEDFMDAIMEVQAKKKANL 427
+T D A + +KK N+
Sbjct: 419 RMKITQADLRKARDKALFQKKGNI 442
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 181/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 59 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 115
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 116 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 169
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 170 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 289
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 290 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 349
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV +EL + DD +GA KA+C EAG++ALR
Sbjct: 350 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 409
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 410 RMKVTNEDFKKSKENVLYKKQ 430
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 181/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 58 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 114
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 115 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 168
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 169 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 228
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 229 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 288
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 289 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 348
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV +EL + DD +GA KA+C EAG++ALR
Sbjct: 349 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 408
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 409 RMKVTNEDFKKSKENVLYKKQ 429
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 180/381 (47%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 176/381 (46%), Positives = 257/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++KSE RI L + E I +N E++K + ++ L P AV
Sbjct: 63 LKLLKSE--RIKDYLLMEQEFI-QNQERLKPQEERQEEERAKVDELRGTPM------AVG 113
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
L+ + A++ T+ +++ ++ VD E+L+PG V +N ++ ++ L + D
Sbjct: 114 SLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPM 173
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M++++ P E Y+D+GGLD+QIQE+ EAV LP+TH E + +GI+PPKGV+LYG PGT
Sbjct: 174 VSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGT 233
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG K+VR+ F +A+E AP+I+FIDE+DA+
Sbjct: 234 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAV 293
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KV+ ATNR++ LDPAL+R GR+DRK
Sbjct: 294 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRK 353
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M + +VN EE + D+ +GA KA+C EAG++ALR
Sbjct: 354 IEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRER 413
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT EDF + V +KK
Sbjct: 414 RMRVTMEDFQKSKENVLYRKK 434
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 177/386 (45%), Positives = 257/386 (66%)
Query: 42 NEIKIMKSEVMRISHELQAQNEKIRE-NTEKIKVNKNLPYLVSN-VIELLDVDPQDTEED 99
++ K+ + ++ RI L + E ++ + + KV++N +IE L DP
Sbjct: 52 SKCKLKQLKLERIKDYLLMEQEFLQNYDLNQPKVDENSKEQADEKIIEELRGDPLTVGNL 111
Query: 100 GAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAE 159
++D D A++ ++ +++ ++ VD KL G V +N + ++ + E
Sbjct: 112 EEIID-DNH-----AIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGE 165
Query: 160 YDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYG 219
D V M+V++ PTE YSDIGGL+ Q+QE+ EA+ LP+TH E + +GI+PPKGV+LYG
Sbjct: 166 VDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYG 225
Query: 220 PPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 279
PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A E AP+I+FIDE
Sbjct: 226 EPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDE 285
Query: 280 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGR 339
+DA+GTKR+DS+ G+RE+QRTMLELLNQLDGF + D+KVI ATNR++ LDPAL+R GR
Sbjct: 286 IDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGR 345
Query: 340 LDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIA 399
+DRKIEFP P+ + + +I +IH+ KMN+S DVN EE S DD +GA KA+C E+G++A
Sbjct: 346 IDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLA 405
Query: 400 LRRGAAIVTHEDFMDAIMEVQAKKKA 425
LR VTH DF A +V +K A
Sbjct: 406 LRERRMRVTHTDFKKAKEKVLYRKTA 431
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 164/311 (52%), Positives = 228/311 (73%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ TS +++ ++ VD + L+PG V +N + ++ L + D V M+V++ P
Sbjct: 48 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 107
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGTGKTLLA+A A
Sbjct: 108 QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 167
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAIGTKR+DS
Sbjct: 168 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG 227
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRKIEFP P+E+
Sbjct: 228 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 287
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ RI QIH+ +M ++ DV ++L + DD +GA KA+C EAG++ALR VT+EDF
Sbjct: 288 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 347
Query: 414 DAIMEVQAKKK 424
+ V KK+
Sbjct: 348 KSKENVLYKKQ 358
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 179/381 (46%), Positives = 256/381 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K + RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKQD--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYG PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M V+ DV+ ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 179/381 (46%), Positives = 253/381 (66%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR+ + + + S V +L P ++
Sbjct: 60 LKLLKQE--RIKDYLLMEEEFIRDQEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M+V++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYG PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M V+ DV ++L + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDFMDAIMEVQAKKK 424
VT+EDF + V KK+
Sbjct: 411 RMKVTNEDFKKSKENVLYKKQ 431
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 176/369 (47%), Positives = 250/369 (67%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
+K++K E RI L + E IR N E++K + + ++ L P ++
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEII 116
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ TS +++ ++ VD + L+PG V +N + ++ L + D
Sbjct: 117 D-DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPL 170
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
V M++++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI+PPKGV+LYGPPGT
Sbjct: 171 VTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E P+I+FIDE+DAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAI 290
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
GTKR+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPAL+R GR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
IEFP P+E+ + RI QIH+ +M ++ DV +EL + DD +GA KA+C EAG++ALR
Sbjct: 351 IEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 404 AAIVTHEDF 412
VT+EDF
Sbjct: 411 RMKVTNEDF 419
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 164/311 (52%), Positives = 226/311 (72%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ +S Y++ ++ VD ++L+PG + ++ ++ L E D V M+V++ P
Sbjct: 124 AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAP 183
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI+PPKGV+LYG PGTGKTLLA+A A
Sbjct: 184 LESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T +TFL++ G +L+Q ++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+
Sbjct: 244 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG 303
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPALLR GR+DRKIEFP P+ +
Sbjct: 304 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R RI QIH+ KM +S DVN EE + D+F+GA KA+C EAG++ALR VTH DF
Sbjct: 364 RRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFK 423
Query: 414 DAIMEVQAKKK 424
A +V KKK
Sbjct: 424 KAKEKVMFKKK 434
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 163/311 (52%), Positives = 226/311 (72%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ +S Y++ ++ VD ++L+PG + ++ ++ L E D V M+V++ P
Sbjct: 124 AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAP 183
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI+PPKGV+LYG PGTGKTLLA+A A
Sbjct: 184 LESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T +TFL++ G +L+Q ++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+
Sbjct: 244 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSG 303
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G+RE+QRTMLELLNQLDGF S D+KVI ATNR++ LDPALLR GR+DRKIEFP P+ +
Sbjct: 304 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R RI QIH+ KM ++ DVN EE + D+F+GA KA+C EAG++ALR VTH DF
Sbjct: 364 RRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFK 423
Query: 414 DAIMEVQAKKK 424
A +V KKK
Sbjct: 424 KAKEKVMFKKK 434
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 818 (293.0 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 170/339 (50%), Positives = 226/339 (66%)
Query: 86 IELLDVDPQDTEEDGAVVD--LDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLV 143
+ LL + E G+ V A K K ++K Y + V VD L G V
Sbjct: 82 VRLLKEEISHLHEQGSHVGEVCKAMDKKK-VLVKNHPDGKYIVDVAASVDISTLAAGTRV 140
Query: 144 GVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEK 203
+ D+Y I E LP++ D V M V++ P Y +GGLD QI+E+ E + LP+ H E
Sbjct: 141 ALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPEL 200
Query: 204 FVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 263
F LGI PKGVLLYGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+GA++VR+
Sbjct: 201 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVREL 260
Query: 264 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAA 323
F +A+E AP+IIF+DE+D+IG+ R + + GD EVQRTMLELLNQLDGF +T +IKVI A
Sbjct: 261 FVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 320
Query: 324 TNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDF 383
TNR+DILD ALLR GR+DRKIEFP P+E+ARA+I++IHSRKMN+ + ++++
Sbjct: 321 TNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGA 380
Query: 384 NGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
+GA+ K+VC EAGM ALR VT EDF A+ +V K
Sbjct: 381 SGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQK 419
Score = 45 (20.9 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 18 EESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEK 64
E+S+ L ++N + RLL EI + + + +A ++K
Sbjct: 63 EKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKK 109
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 175/386 (45%), Positives = 250/386 (64%)
Query: 43 EIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAV 102
++K+++ E RI L + E + N+E +K + +E + +P +
Sbjct: 56 KLKLLRME--RIKDHLLLEEEFV-SNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEI 112
Query: 103 VDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDA 162
+D D A++ + T Y++ ++ VD E L+PG V ++ + I+ L + D
Sbjct: 113 IDDDH------AIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADP 166
Query: 163 RVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
V M++D+ PTE YSDIGGL+ QIQE+ E+V LP+TH E + +GI+PPKGV+LYG PG
Sbjct: 167 MVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPG 226
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTLLA+A A QT +TFL++ G +L+Q ++GDG +L R F +A E AP+I+FIDE+DA
Sbjct: 227 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDA 286
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
IGTKR+DS G+RE+QRTMLELLNQLDGF D+KVI ATN+++ LDPAL+R GR+DR
Sbjct: 287 IGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDR 346
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
KI F +P+ + +I+ IH+ KMN+S DVN E L + DD +GA +A+C EAG++ALR
Sbjct: 347 KILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRE 406
Query: 403 GAAIVTHEDFMDAIMEVQAKK-KANL 427
VT EDF A V K + NL
Sbjct: 407 RRMQVTAEDFKQAKERVMKNKVEENL 432
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 174/378 (46%), Positives = 250/378 (66%)
Query: 47 MKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLD 106
+K ++ HELQ Q + N +++ +N +++ + +L + Q +E G+ V
Sbjct: 32 LKQYYLQHIHELQRQLRQKTNNLNRLEAQRNE---LNSRVRMLREELQLLQEPGSYVGEV 88
Query: 107 AQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVK 165
+ GK V +K Y + + +D K+ P V + DSY++ LP++ D V
Sbjct: 89 VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 148
Query: 166 AMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGK 225
M+V++ P Y IGGLD+QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGK
Sbjct: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 226 TLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGT 285
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 286 KRFDSEKA-GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
R +S GD EVQRTMLELLNQLDGF ++ IKV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
EFP+PNEE+R I++IHSRKMN+ ++ ++++ + +GA+ KAVC EAGM ALR
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
Query: 405 AIVTHEDFMDAIMEVQAK 422
VT EDF A+ +V K
Sbjct: 389 VHVTQEDFEMAVAKVMKK 406
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 810 (290.2 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 154/315 (48%), Positives = 220/315 (69%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++ Y++ ++ VD L+PG V ++ + ++ L + D V M++D+ P
Sbjct: 122 AIVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSP 181
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
TE Y+DIGGL+ QIQE+ E+V LP+TH E + +GI+PPKGV+LYG PGTGKTLLA+A A
Sbjct: 182 TESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVA 241
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
QT +TFL++ G +L+Q ++GDG +L R F +A + AP+I+FIDE+DAIGTKR++S
Sbjct: 242 NQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSG 301
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G+RE+QRTMLELLNQLDGF DIKVI ATN+++ LDPAL+R GR+DRKI F +P+
Sbjct: 302 GEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANT 361
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ +I+ IH+ KM+++ DVN +E+ DD +GA KA+C EAG++ALR V EDF
Sbjct: 362 KKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFK 421
Query: 414 DAIMEVQAKK-KANL 427
A V K + NL
Sbjct: 422 SAKERVLKNKVEENL 436
Score = 41 (19.5 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 46 IMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVD 92
+++ E + Q + E EK+ + P + + E++D D
Sbjct: 74 LLEEEFVTNQEAFQPTEARQAEEREKVDELRGYPMAIGTLEEIIDDD 120
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 170/357 (47%), Positives = 235/357 (65%)
Query: 67 ENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGKCAVIKTSTRQTYF 125
+N +++ +N ++ + +L + Q E G+ V ++ K ++K Y
Sbjct: 50 QNVRRLQAQRNE---LNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYV 106
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ V +D L G V + DSY + + LP + D V M V++ P Y +GGLDK
Sbjct: 107 VDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDK 166
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI+E+ E + LP+ H E F LGI PKGVLL+GPPGTGKTLLARA A T+ TF++++G
Sbjct: 167 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSG 226
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQRTMLEL
Sbjct: 227 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 286
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
LNQLDGF +T +IKVI ATNR+DILDPALLR GR+DRKIEFP P+E+ARA I++IHSRKM
Sbjct: 287 LNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKM 346
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
N+ +N +++ +GA+ K+VC EAGM ALR VT EDF A+ +V K
Sbjct: 347 NLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQK 403
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 179/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQAQ-NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ NEK +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLTVNEK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 179/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ NEK +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 36 ELQLIVNEK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 90
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 91 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 150
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 151 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 270
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 271 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 330
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 331 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 390
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 391 MAVAKVMQK 399
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 177/368 (48%), Positives = 239/368 (64%)
Query: 57 ELQAQ-NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGKCA 114
ELQ NEK +N +++ +N ++ + LL + Q +E G+ V ++ K
Sbjct: 30 ELQLTVNEK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRVMDKKKV 85
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + G
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
D EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 385
Query: 415 AIMEVQAK 422
A+ +V K
Sbjct: 386 AVAKVMQK 393
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 175/369 (47%), Positives = 246/369 (66%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAV 115
ELQ Q EK N +++ +N +++ + +L + Q +E G+ V + GK V
Sbjct: 42 ELQRLQREK-SYNLNRLEAQRNE---LNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKV 97
Query: 116 -IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
+K Y + + +D KL P V + DSY++ LP++ D V M+V++ P
Sbjct: 98 LVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 157
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y IGGLD+QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA- 293
T TF++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF ++ IKV+ ATNR+DILD ALLR GR+DRKIEFP+PNEE+
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN+ ++ ++++ + +GA+ KAVC EAGM ALR VT EDF
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 398 MAVAKVMKK 406
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 178/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ N+K +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLIVNDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 178/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ N+K +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLIVNDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 178/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ N+K +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLIVNDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 178/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ N+K +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLIVNDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 178/369 (48%), Positives = 240/369 (65%)
Query: 57 ELQA-QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKC 113
ELQ N+K +N +++ +N ++ + LL + Q +E G+ V + A K K
Sbjct: 30 ELQLIVNDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK- 84
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
++K + + V +D + P V + DSY + + LP + D V M V++ P
Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T TF++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEA
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 414 DAIMEVQAK 422
A+ +V K
Sbjct: 385 MAVAKVMQK 393
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 171/367 (46%), Positives = 240/367 (65%)
Query: 57 ELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGKCAV 115
ELQ + +N +++ +N ++ + +L + Q +E G+ V ++ K +
Sbjct: 29 ELQLVVAEKHQNLRRLQAQRNE---LNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 85
Query: 116 IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTE 175
+K + + + +D + P V + +SY + + LP + D V M V++ P
Sbjct: 86 VKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 145
Query: 176 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQ 235
Y +GGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A
Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205
Query: 236 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 295
T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD
Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265
Query: 296 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARA 355
EVQRTMLELLNQLDGF +T +IKVI ATNR+DILDPALLR GR+DRKIEFP PNEEAR
Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325
Query: 356 RIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDA 415
I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF A
Sbjct: 326 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 385
Query: 416 IMEVQAK 422
+ +V K
Sbjct: 386 VAKVMQK 392
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 184/409 (44%), Positives = 257/409 (62%)
Query: 17 GEESL-GDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVN 75
GE + GD + +M D+ SR + + + K E +++ N+K +N +++
Sbjct: 5 GEYKVAGDGMEQMEMDE--SRGGIGLRQYYLSKIEDLQL-----VVNDK-SQNLRRLQAQ 56
Query: 76 KNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKCAVIKTSTRQTYFLPVIGLVD 133
+N ++ + LL + Q +E G+ V + A K K ++K + + + +D
Sbjct: 57 RNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK-VLVKVHPEGKFVVDIDKNID 112
Query: 134 AEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEA 193
+ P V + DSY + + LP + D V M V++ P Y IGGLDKQI+E+ E
Sbjct: 113 INDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEV 172
Query: 194 VVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFI 253
+ LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A T TF++++G +LVQ FI
Sbjct: 173 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 232
Query: 254 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 313
G+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQRTMLELLNQLDGF
Sbjct: 233 GEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFE 292
Query: 314 STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNY 373
+T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR I++IHSRKMN++ +N
Sbjct: 293 ATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 352
Query: 374 EELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
+++ +GA+ K VC EAGM ALR VT EDF A+ +V K
Sbjct: 353 RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 401
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 175/363 (48%), Positives = 237/363 (65%)
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKCAVIKTS 119
N+K +N +++ +N ++ + LL + Q +E G+ V + A K K ++K
Sbjct: 44 NDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK-VLVKVH 98
Query: 120 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSD 179
+ + V +D + P V + DSY + + LP + D V M V++ P Y
Sbjct: 99 PEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 158
Query: 180 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKST 239
IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A T T
Sbjct: 159 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 218
Query: 240 FLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQ 299
F++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQ
Sbjct: 219 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 278
Query: 300 RTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 359
RTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR I++
Sbjct: 279 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 338
Query: 360 IHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF A+ +V
Sbjct: 339 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 398
Query: 420 QAK 422
K
Sbjct: 399 MQK 401
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 174/389 (44%), Positives = 253/389 (65%)
Query: 36 RTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQD 95
+T +L + I++ +I A +K +N +++ +N ++ + LL + Q
Sbjct: 6 KTNVLQSNENIVQYYTQKIQDAELAILQKT-QNLRRLEAQRNG---LNARVRLLREEIQL 61
Query: 96 TEEDGAVVDLDAQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE 154
+E G+ V + GK V +K Y + + +D +++KP V + DSY +++
Sbjct: 62 LQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIK 121
Query: 155 TLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKG 214
LP + D V M V++ P Y +GGL+KQI+E+ E + LP+ H E F +LGI PKG
Sbjct: 122 ILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKG 181
Query: 215 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAI 274
+LLYGPPGTGKTLLARA A T F++++G +LVQ +IG+G+++VR+ F +A+E AP+I
Sbjct: 182 ILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 241
Query: 275 IFIDELDAIGTKRFDSEK-AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPA 333
IF+DE+D+IG+ R DS +GD EVQRTMLELLNQLDGF +T +IKVI ATNR+DILDPA
Sbjct: 242 IFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 301
Query: 334 LLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCV 393
LLR GR+DRKIEFP P+ EARA I++IHSR MN++ ++ + ++ + +GA+ K VC
Sbjct: 302 LLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCT 361
Query: 394 EAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
EAGM ALR VT EDF A+ +V K
Sbjct: 362 EAGMFALRERRVHVTQEDFELAVAKVLNK 390
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 177/390 (45%), Positives = 252/390 (64%)
Query: 42 NEIKIMKSEVMRISHELQAQ-NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDG 100
+E K +KS EL+ + NEK ++ +++ +N ++N + +L + Q G
Sbjct: 11 DETKGIKSYYCSKIEELEIKVNEKAQD-LRRLEAQRNE---LNNRVRMLKEELQLLTNPG 66
Query: 101 AVVDLDAQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAE 159
+ V + GK V +K + + + + VD KL P + +SY + LP +
Sbjct: 67 SHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNK 126
Query: 160 YDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYG 219
D V M+V++ P Y +GGLDKQI+E+ E + LP+ H E F +LGI PKGVLLYG
Sbjct: 127 IDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 186
Query: 220 PPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 279
PPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE
Sbjct: 187 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDE 246
Query: 280 LDAIGTKRFDSEKAG-DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
+D+IG+ R +S G D EVQRTMLELLNQLDGF ST +IKV+ TNR+DILDPALLR G
Sbjct: 247 IDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPG 306
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMI 398
R+DRKIEFP+P + R I++IHSRKMN++ +N +++S + +GA+ KAVC EAGM
Sbjct: 307 RIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMY 366
Query: 399 ALRRGAAIVTHEDFMDAIMEVQAKKKANLN 428
ALR V+ EDF A+ +V KK + N
Sbjct: 367 ALRERRVHVSQEDFEMAVSKVM-KKDSEQN 395
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 178/405 (43%), Positives = 262/405 (64%)
Query: 29 STDDINSRTRLLDNE-IK--IMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNV 85
+ +D N + L+ E ++ I + ++I N+K+ +N ++++ +N L + V
Sbjct: 30 NNNDNNKNSSALNEEQVQSGIKRYYELKIEEYESIINKKL-QNKKRLEAQRN--ELNARV 86
Query: 86 IELLDVDPQDTEEDGAVVDLDAQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVG 144
EL D + Q E + V + GK V +K + Y + + ++ P V
Sbjct: 87 RELCD-EIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVA 145
Query: 145 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKF 204
+ DSY + + LP++ D V M+V++ P Y +GGLD+Q++E+ E + LP+ H E F
Sbjct: 146 LYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIF 205
Query: 205 VNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAF 264
+LGI PKGVLLYGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F
Sbjct: 206 ESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 265
Query: 265 ALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAAT 324
+A+E AP+IIF+DE+D+IG++R + E GD EVQRTM+ELLNQLDGF ST +IKVI T
Sbjct: 266 VMAREHAPSIIFMDEIDSIGSQRIEGEH-GDSEVQRTMMELLNQLDGFESTQNIKVIMCT 324
Query: 325 NRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFN 384
NR+DILD ALLR GR+DRKIEFP+PN EAR I++IHSRKMN+ ++ +++ ++ +
Sbjct: 325 NRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCS 384
Query: 385 GAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNY 429
GA+ KAVC EAGM ALR VT EDF A+ +V K+ A N+
Sbjct: 385 GAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVM-KQDAEKNF 428
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 178/405 (43%), Positives = 262/405 (64%)
Query: 29 STDDINSRTRLLDNE-IK--IMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNV 85
+ +D N + L+ E ++ I + ++I N+K+ +N ++++ +N L + V
Sbjct: 30 NNNDNNKNSSALNEEQVQSGIKRYYELKIEEYESIINKKL-QNKKRLEAQRN--ELNARV 86
Query: 86 IELLDVDPQDTEEDGAVVDLDAQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVG 144
EL D + Q E + V + GK V +K + Y + + ++ P V
Sbjct: 87 RELCD-EIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVA 145
Query: 145 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKF 204
+ DSY + + LP++ D V M+V++ P Y +GGLD+Q++E+ E + LP+ H E F
Sbjct: 146 LYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIF 205
Query: 205 VNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAF 264
+LGI PKGVLLYGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F
Sbjct: 206 ESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 265
Query: 265 ALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAAT 324
+A+E AP+IIF+DE+D+IG++R + E GD EVQRTM+ELLNQLDGF ST +IKVI T
Sbjct: 266 VMAREHAPSIIFMDEIDSIGSQRIEGEH-GDSEVQRTMMELLNQLDGFESTQNIKVIMCT 324
Query: 325 NRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFN 384
NR+DILD ALLR GR+DRKIEFP+PN EAR I++IHSRKMN+ ++ +++ ++ +
Sbjct: 325 NRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCS 384
Query: 385 GAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNY 429
GA+ KAVC EAGM ALR VT EDF A+ +V K+ A N+
Sbjct: 385 GAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVM-KQDAEKNF 428
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 170/381 (44%), Positives = 249/381 (65%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV 103
++++K + RI L + E + +N E++K N ++ + P ++
Sbjct: 67 LRLLKMQ--RIHDHLLMEEEYV-QNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEII 123
Query: 104 DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 163
D D A++ T+ + Y++ ++ VD + L+PG V ++ + I+ L + D
Sbjct: 124 DDDH------AIVSTAGPE-YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPM 176
Query: 164 VKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
+ M++D+ PTE Y+DIGGL+ QIQE+ EAV LP+TH E + +GI+PPKGV+LYG PGT
Sbjct: 177 INVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGT 236
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A QT +TFL++ G +L+Q ++GDG +LVR F A+E +P+I+FIDE+DAI
Sbjct: 237 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAI 296
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGF-SSTADIKVIAATNRVDILDPALLRSGRLDR 342
GTKR+D++ +RE+QRTMLELLNQLDGF +S DIKVI ATNR+ LDPAL+R GR+DR
Sbjct: 297 GTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDR 356
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
KI F +P+E + +I IH+ KMN+ DVN EEL + DD +GA+ KA+ EAG++ALR
Sbjct: 357 KILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRE 416
Query: 403 GAAIVTHEDFMDAIMEVQAKK 423
V +DF A +V K
Sbjct: 417 RRMRVVMDDFRQAREKVLKTK 437
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 175/363 (48%), Positives = 237/363 (65%)
Query: 62 NEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKCAVIKTS 119
N+K +N +++ +N ++ + LL + Q +E G+ V + A K K ++K
Sbjct: 31 NDK-SQNLRRLQAQRNE---LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK-VLVKVH 85
Query: 120 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSD 179
+ + V +D + P V + DSY + + LP + D V M V++ P Y
Sbjct: 86 PEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 145
Query: 180 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKST 239
IGGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A T T
Sbjct: 146 IGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 205
Query: 240 FLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQ 299
F++++G +LVQ FIG+GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQ
Sbjct: 206 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQ 264
Query: 300 RTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 359
RTMLELLNQLDGF +T +IKVI ATNR+DILD ALLR GR+DRKIEFP PNEEAR I++
Sbjct: 265 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 324
Query: 360 IHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT EDF A+ +V
Sbjct: 325 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 384
Query: 420 QAK 422
K
Sbjct: 385 MQK 387
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 163/390 (41%), Positives = 248/390 (63%)
Query: 45 KIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD 104
K+ + R+ L + E + EN E+++ K +N ++ D+ ++ +E V D
Sbjct: 63 KLRYLRMQRVHDHLLLEEEYV-ENMERLRKAKASASDSANRGDV-DITDRNADERSRVDD 120
Query: 105 LDAQRKG----------KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE 154
+ G A++ ++T Y++ ++ VD + L+PG + ++ + ++
Sbjct: 121 MRGSPMGVGNLEELIDDDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVG 180
Query: 155 TLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKG 214
L E D V M++D+ PTE Y+DIGGL+ QIQE+ E+V LP+ H E + +GI+PPKG
Sbjct: 181 VLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKG 240
Query: 215 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAI 274
V+LYG PGTGKTLLA+A A QT +TFL++ G +L+Q ++GDG +LVR F +A E AP+I
Sbjct: 241 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSI 300
Query: 275 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 334
+FIDE+DAIGTKR+DS G+RE+QRTMLELLNQLDGF D+KVI ATN+++ LDPAL
Sbjct: 301 VFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 360
Query: 335 LRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVE 394
+R GR+DRKI F +P++ + +I +H+ KM++ DV+ +E DD +GA +A+C E
Sbjct: 361 IRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTE 420
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEVQAKKK 424
AG++ALR V +DF A + K+
Sbjct: 421 AGLMALRERRMRVQMDDFRAARERIMKTKQ 450
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 176/373 (47%), Positives = 245/373 (65%)
Query: 53 RISHELQ-AQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD--LDAQR 109
+IS ELQ NE+ ++N +++ +N L + LL + Q +E G+ + +
Sbjct: 21 KIS-ELQFTVNER-QKNLLRLQAQRNELNLK---VRLLREELQLLQEQGSYIAEVVKPMD 75
Query: 110 KGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEV 169
K K ++K Y + V ++ + + P V + +SY + + LP + D V M V
Sbjct: 76 KNK-VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLV 134
Query: 170 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLA 229
++ P Y +GGLDKQIQE+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLLA
Sbjct: 135 EKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 230 RACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 289
RA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 195 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLE 254
Query: 290 SEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHP 349
+ GD EVQRTMLELLNQLDGF +T +IKVI ATNR+D+LD ALLR GR+DRKIEFP P
Sbjct: 255 TG-TGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPP 313
Query: 350 NEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTH 409
NEEAR I++IHSRKMN++ +N +++ +GA+ K VC EAGM ALR VT
Sbjct: 314 NEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQ 373
Query: 410 EDFMDAIMEVQAK 422
EDF A+ +V K
Sbjct: 374 EDFEMAVSKVMMK 386
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 773 (277.2 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 154/297 (51%), Positives = 207/297 (69%)
Query: 128 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 182
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
Query: 183 LDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 242
+QI+++ E V LPM H EKFV LGI PPKGVL YGPPGTGKTLLARA A +T + F++
Sbjct: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
Query: 243 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 302
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 303 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
LE++NQLDGF + +IKV+ ATNR D LDPALLR GRLDRK+EF P+ E+R +I +IH+
Sbjct: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
Query: 363 RKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
R MN D+ +E L+R + GA ++VC EAGM A+R VT +DF+DA+ +V
Sbjct: 353 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
Score = 52 (23.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 46 IMKSEVMRISHELQ-AQNEKI-RENTEKIKVNKNLPYLVSNVIELLD-VDPQDTEEDGAV 102
+ ++M+ LQ A+ KI NTE K N+ + V+ L D V P D EE G
Sbjct: 74 VSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEE-GMR 132
Query: 103 VDLDAQR 109
V +D +
Sbjct: 133 VGVDRNK 139
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 168/391 (42%), Positives = 242/391 (61%)
Query: 23 DDILRMSTDDINSRTRLLDNE-IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYL 81
D++ + D +S LD E + + ++ + ++ Q E I++ +K K +
Sbjct: 13 DELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLK--KEYLHA 70
Query: 82 VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 141
V + V P + VD Q G ++ ++T Y++ ++ +D E LKP
Sbjct: 71 QEEVKRIQSV-PLVIGQFLEAVD---QNTG---IVGSTTGSNYYVRILSTIDRELLKPSA 123
Query: 142 LVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHK 201
V ++K S +++ LP E D+ + ++ DE+P Y+DIGG+D Q QE+ EAV LP+TH
Sbjct: 124 SVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHF 183
Query: 202 EKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVR 261
E + +GI PP+GVL+YGPPG GKT+LA+A A T ++F+++ G + VQ ++G+G ++VR
Sbjct: 184 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVR 243
Query: 262 DAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVI 321
D F LAKE APAIIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF T ++KVI
Sbjct: 244 DVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVI 303
Query: 322 AATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTD 381
ATNR D LDPALLR GRLDRKIEFP P+ + + + KMN+S DV+ EE D
Sbjct: 304 MATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPD 363
Query: 382 DFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
+GA A+C EAGM A+R IV +DF
Sbjct: 364 KISGADINAICQEAGMHAVRENRYIVLAKDF 394
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 169/372 (45%), Positives = 241/372 (64%)
Query: 57 ELQAQNEKIR-----ENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKG 111
E Q Q+ +IR +N +++ +N ++N + L + + +E G+ V + G
Sbjct: 20 EQQIQDTEIRIQQTTQNLRRLEAQRNK---LNNKVRQLKDELKLLQEPGSYVGEVVKVMG 76
Query: 112 -KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVD 170
K ++K + + V +D +KL P V + DS+ + + LP + D V M V+
Sbjct: 77 LKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVE 136
Query: 171 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLAR 230
+ P Y +GGLDKQI+E+ E + LP+ H E F +LGI PKGV+LYGPPGTGKTLLAR
Sbjct: 137 KVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLAR 196
Query: 231 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 290
A A T+ F++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +
Sbjct: 197 AVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 256
Query: 291 EKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPN 350
GD EVQRTMLELLNQLDGF S+ DIK+I ATNR+DILDPALLR GR+DRKIEFP P
Sbjct: 257 SSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPT 316
Query: 351 EEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHE 410
AR I++IHSR MN++ +N +++ + +GA K VC EAGM ALR VT E
Sbjct: 317 VAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQE 376
Query: 411 DFMDAIMEVQAK 422
DF A+ +V +K
Sbjct: 377 DFELAVAKVMSK 388
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 773 (277.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 147/316 (46%), Positives = 213/316 (67%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ ++ Y++ ++ ++ E LKP V +++ S+ I+ LP+E D+ ++ +++ ERP
Sbjct: 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
+Y+D+GGLD Q QE+ EAV LP+T E + +GI+PP G+L+YGPPGTGKT+L +A A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+T+ TF+ + G + VQ ++G+G ++VRD F LA+E +P+IIFIDE+DAI TKRFD++
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF + ++KVI ATNR D LDPALLR GRLDRKIEFP P+ + +
Sbjct: 255 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 314
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I Q KMNVS DVN E TD + A A+ EAGM A+R+ I+T DF
Sbjct: 315 RLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQ 374
Query: 415 AIMEVQAKKKANLNYY 430
K+ + +Y
Sbjct: 375 GYRTHVRKQLRDYEFY 390
Score = 43 (20.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 DILRMSTDDINSRTRLLDNEIKIMKSEVMRI 54
DIL + D I + L E+ K+E+ RI
Sbjct: 25 DILNIQEDYIKEEHKNLKRELIRSKNEIKRI 55
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 773 (277.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 147/316 (46%), Positives = 213/316 (67%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ ++ Y++ ++ ++ E LKP V +++ S+ I+ LP+E D+ ++ +++ ERP
Sbjct: 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
+Y+D+GGLD Q QE+ EAV LP+T E + +GI+PP G+L+YGPPGTGKT+L +A A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+T+ TF+ + G + VQ ++G+G ++VRD F LA+E +P+IIFIDE+DAI TKRFD++
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF + ++KVI ATNR D LDPALLR GRLDRKIEFP P+ + +
Sbjct: 255 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 314
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I Q KMNVS DVN E TD + A A+ EAGM A+R+ I+T DF
Sbjct: 315 RLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQ 374
Query: 415 AIMEVQAKKKANLNYY 430
K+ + +Y
Sbjct: 375 GYRTHVRKQLRDYEFY 390
Score = 43 (20.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 DILRMSTDDINSRTRLLDNEIKIMKSEVMRI 54
DIL + D I + L E+ K+E+ RI
Sbjct: 25 DILNIQEDYIKEEHKNLKRELIRSKNEIKRI 55
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 177/428 (41%), Positives = 259/428 (60%)
Query: 5 ATATLEDSSIWEGEE--SLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQN 62
+ A LE+ I +E SL L + D++S D+ IK+ E +++H LQ
Sbjct: 2 SAAALEEIGIAPLQENTSLRPPPLPATCVDVSS-----DDYIKLTTLE-RQLAH-LQVME 54
Query: 63 EKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQ 122
+ I+ T ++ K L + V + V P + VD + A++ ++T
Sbjct: 55 DYIKLETRNLE--KELLHAQEEVKRIQSV-PLVIGQFLEAVDQNH------AIVGSTTGS 105
Query: 123 TYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 182
Y++ V+ ++D E LKPG V ++K S +++ LP E D+ ++ + DE+P Y DIGG
Sbjct: 106 NYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGG 165
Query: 183 LDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 242
LD Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A AA T ++F++
Sbjct: 166 LDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIR 225
Query: 243 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 302
+ G + VQ ++G+G ++VRD F LAKE +P+IIFIDE+DAI TKRFD++ DREVQR +
Sbjct: 226 VVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRIL 285
Query: 303 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
LELLNQ+DGF + ++KVI ATNR D LDPALLR GRLDRKIEFP P+ + +
Sbjct: 286 LELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVC 345
Query: 363 RKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
+MN+S DV+ E+ D +GA ++C EAGM A+R +V +D A V K
Sbjct: 346 SRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKK 405
Query: 423 KKANLNYY 430
+ +Y
Sbjct: 406 DTNDFEFY 413
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 174/371 (46%), Positives = 237/371 (63%)
Query: 42 NEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGA 101
N+I+ MK E+ +Q Q R ++ N + L+ + LL Q G
Sbjct: 9 NKIESMKLEI------IQGQAVLRRLEAQRNDYNSRVR-LLREELGLLQ---QPGSYVGE 58
Query: 102 VVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYD 161
VV + + +K ++K Y + + VD KL G V + DSY + + LP+ D
Sbjct: 59 VVKVMSTKK---VLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVD 115
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
V M V++ P Y IGGLD+QI+E+ E + L + H E F +LGI PKGVLLYGPP
Sbjct: 116 PLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPP 175
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A T F++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D
Sbjct: 176 GTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 235
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
+IG+ R DS +GD EVQRTMLELLNQLDGF T +IK+I ATNR+DILDPALLR GR+D
Sbjct: 236 SIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRID 295
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
RKIEFP P+ EARA I++IHSR MN++ +N +++ + +GA+ K VC EAGM ALR
Sbjct: 296 RKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALR 355
Query: 402 RGAAIVTHEDF 412
VT EDF
Sbjct: 356 ERRVHVTQEDF 366
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 149/316 (47%), Positives = 215/316 (68%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++++++ T + ++ +D E LKP V + + S +++TLP E D+ + + DE+P+
Sbjct: 87 IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPS 146
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
E YSDIGG D Q QE+ EAV LP+TH + +GI PP+GVLLYGPPGTGKT+LA+A A
Sbjct: 147 ESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 206
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
T + F+++ G + VQ ++G+G +LVRD F LA+E +PAIIFIDE+DAI TKRFD++
Sbjct: 207 HTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 266
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR ++ELLNQ+DGF + ++KVI ATNR D LDPALLR GRLDRKIEFP P+ +
Sbjct: 267 DREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 326
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I Q+ + KMN+S +V+ E+ D +GA+ +++C EAGM A+R+ ++ +DF
Sbjct: 327 RLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEK 386
Query: 415 AIMEVQAKKKANLNYY 430
K N+Y
Sbjct: 387 GYKASIKKNTHEFNFY 402
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 164/411 (39%), Positives = 246/411 (59%)
Query: 21 LGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPY 80
L ++I + + L +++ ++ ++ +Q Q + I+E +K K +
Sbjct: 4 LKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLK--KEFIH 61
Query: 81 LVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPG 140
V + V P + VD + G ++ ++T Y++ V+ +D E+LKP
Sbjct: 62 AQEEVKRIKAV-PLVIGQFLEAVD---ENNG---IVASTTGSNYYVRVLSTIDREQLKPS 114
Query: 141 DLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTH 200
VG++K S +++ +P E D+ + + DE+P YSDIGGLD Q QE+ EAV LP+TH
Sbjct: 115 SSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTH 174
Query: 201 KEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 260
+ + +GI PP+GVLL+GPPG GKT+LA+A A T ++F+++ G + VQ ++G+G ++V
Sbjct: 175 AQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMV 234
Query: 261 RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKV 320
RD F LAK+ +P+IIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF T +IKV
Sbjct: 235 RDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKV 294
Query: 321 IAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRST 380
I ATNR D LDPALLR GRLDRKIE P P+ + + + KMNV DV+ E++
Sbjct: 295 IMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARP 354
Query: 381 DDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNYYA 431
D + A A+C EAGM A+R +V +DF K +A +Y+
Sbjct: 355 DKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS 405
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 163/369 (44%), Positives = 238/369 (64%)
Query: 57 ELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGKCAV 115
++Q KIR TE ++ + +++ + + + + +E G+ V ++ K +
Sbjct: 26 KIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVL 85
Query: 116 IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTE 175
+K Y + V ++ + LK V + DSY++ + L + D V M V++ P
Sbjct: 86 VKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDS 145
Query: 176 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQ 235
Y +GGL KQI+E+ E + LP+ H E F +LGI PKGV+LYGPPGTGKTLLARA A
Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205
Query: 236 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 295
T F++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD
Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265
Query: 296 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARA 355
EVQRTMLELLNQLDGF ++ +IK+I ATNR+DILDPALLR GR+DRKIEFP P+ ARA
Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARA 325
Query: 356 RIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDA 415
I++IHSRKMN++ +N +++ + +GA K VC EAGM ALR VT EDF A
Sbjct: 326 EILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 385
Query: 416 IMEVQAKKK 424
+ +V K +
Sbjct: 386 VGKVMNKNQ 394
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 100 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 159
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 160 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 219
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 220 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 279
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 280 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 339
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 340 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 399
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 400 KAYKTVIKKDEQEHEFY 416
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/317 (47%), Positives = 212/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+DIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ I + KMN+S +V+ E+ D +GA ++C E+GM+A+R IV +DF
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>UNIPROTKB|E9PS45 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] GO:GO:0001824 EMBL:AC090559 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00980661 ProteinModelPortal:E9PS45 SMR:E9PS45
PRIDE:E9PS45 Ensembl:ENST00000527906 ArrayExpress:E9PS45
Bgee:E9PS45 Uniprot:E9PS45
Length = 175
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 151/175 (86%), Positives = 165/175 (94%)
Query: 28 MSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIE 87
MST++I RTRLLD+EIKIMKSEV+R++HELQA +KI+EN+EKIKVNK LPYLVSNVIE
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 147
LLDVDP D EEDGA +DLD+QRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK
Sbjct: 61 LLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNK 120
Query: 148 DSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKE 202
DSYLILETLP EYD+RVKAMEVDERPTEQYSDIGGLDKQIQEL+EA+VLPM HKE
Sbjct: 121 DSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKE 175
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 150/317 (47%), Positives = 211/317 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + D++P
Sbjct: 101 AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
YSDIGG+D Q QE+ EAV LP+TH E + +GI PP+GVL+YGPPG GKT+LA+A A
Sbjct: 161 DVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++
Sbjct: 221 HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR +LELLNQ+DGF ++KVI ATNR D LDPALL GRLDRKIEFP P+
Sbjct: 281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQ 340
Query: 354 RARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
+ + + KMN+S +V+ E+ D +GA ++C EAGM+A+R IV +DF
Sbjct: 341 KRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFE 400
Query: 414 DAIMEVQAKKKANLNYY 430
A V K + +Y
Sbjct: 401 KAYKTVIKKDEQEHEFY 417
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 177/419 (42%), Positives = 258/419 (61%)
Query: 19 ESLGDDILRMSTDDINSRTR---LLDN-EIKIMKSEVMR-ISHELQAQNEKIRENTEKIK 73
+ LGDD+ + DD + LD +I ++K + +L+ + I EN K K
Sbjct: 3 DHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADI-ENCLK-K 60
Query: 74 VNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRK-GKCAVIKTSTRQT--YFLPVIG 130
VN+ L + + L D D + + + +C I TS + Y + V
Sbjct: 61 VNE-LSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQ 119
Query: 131 ----LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDI 180
+VD A+ + P D+ VGV+++ Y I LPA+ D V M+V+E+P YSD+
Sbjct: 120 FAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDV 179
Query: 181 GGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTF 240
GG QI++L E V P+ H E++VNLGI+PPKGVLLYGPPGTGKTL ARA A +T + F
Sbjct: 180 GGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACF 239
Query: 241 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR 300
+++ G +LVQ ++G+GA++VR+ F +A+ K +IF DE+DA+G RFD + GD EVQR
Sbjct: 240 IRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQR 299
Query: 301 TMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI 360
TMLEL+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRK+EF P+ RA I++I
Sbjct: 300 TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKI 359
Query: 361 HSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
H+++M+V D+ Y+ L+R + GA+ ++VC EAGM A+R + T +DF++AI +V
Sbjct: 360 HAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKV 418
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 177/419 (42%), Positives = 258/419 (61%)
Query: 19 ESLGDDILRMSTDDINSRTR---LLDN-EIKIMKSEVMR-ISHELQAQNEKIRENTEKIK 73
+ LGDD+ + DD + LD +I ++K + +L+ + I EN K K
Sbjct: 3 DHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADI-ENCLK-K 60
Query: 74 VNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRK-GKCAVIKTSTRQT--YFLPVIG 130
VN+ L + + L D D + + + +C I TS + Y + V
Sbjct: 61 VNE-LSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQ 119
Query: 131 ----LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDI 180
+VD A+ + P D+ VGV+++ Y I LPA+ D V M+V+E+P YSD+
Sbjct: 120 FAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDV 179
Query: 181 GGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTF 240
GG QI++L E V P+ H E++VNLGI+PPKGVLLYGPPGTGKTL ARA A +T + F
Sbjct: 180 GGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACF 239
Query: 241 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR 300
+++ G +LVQ ++G+GA++VR+ F +A+ K +IF DE+DA+G RFD + GD EVQR
Sbjct: 240 IRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQR 299
Query: 301 TMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI 360
TMLEL+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRK+EF P+ RA I++I
Sbjct: 300 TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKI 359
Query: 361 HSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
H+++M+V D+ Y+ L+R + GA+ ++VC EAGM A+R + T +DF++AI +V
Sbjct: 360 HAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKV 418
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 148/331 (44%), Positives = 216/331 (65%)
Query: 100 GAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAE 159
G +++ Q G ++ ++T Y++ ++ ++ E LKP V +++ S +++ LP E
Sbjct: 80 GQFMEMVDQNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPE 136
Query: 160 YDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYG 219
D+ + + E+P Y+DIGG D Q QE+ EAV LP+TH E + +GI PP+GVLLYG
Sbjct: 137 ADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYG 196
Query: 220 PPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 279
PPGTGKT+LA+A A T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE
Sbjct: 197 PPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE 256
Query: 280 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGR 339
+DAI T RFD++ DREVQR ++ELLNQ+DGF T ++KVI ATNR D LDPALLR GR
Sbjct: 257 VDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGR 316
Query: 340 LDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIA 399
LDRKIEFP P+ + + Q+ + KMN+S +V+ E+ D + A+ A+C EAGM A
Sbjct: 317 LDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHA 376
Query: 400 LRRGAAIVTHEDFMDAIMEVQAKKKANLNYY 430
+R+ ++ +DF K + +Y
Sbjct: 377 VRKNRYVILPKDFEKGYRANVKKPDTDFEFY 407
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 159/310 (51%), Positives = 211/310 (68%)
Query: 128 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 182
V+ L D KL P D+ VGV+++ Y I LP + DA V M+V+E+P Y D+GG
Sbjct: 117 VVALGD--KLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGG 174
Query: 183 LDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 242
+QI++L E V +P+ H EKFVNLGI PPKGVL+YGPPGTGKTL ARA A +T + F++
Sbjct: 175 CKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVR 234
Query: 243 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 302
+ G +LVQ ++G+GA++VRD F +A+ K IIF DE+DAIG RFD GD EVQRTM
Sbjct: 235 VIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTM 294
Query: 303 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
LEL+NQLDGF +IKV+ ATNR D LDPALLR GRLDRK+EF P+ E RA I IH+
Sbjct: 295 LELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHA 354
Query: 363 RKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV--- 419
+ M+ + D+ +E L+R + GA ++VC EAGM A+R +V+ +DF++AI +V
Sbjct: 355 KTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKS 414
Query: 420 QAKKKANLNY 429
AK A Y
Sbjct: 415 YAKFSATSRY 424
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 750 (269.1 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 146/319 (45%), Positives = 217/319 (68%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++++ST Y + ++ +D EKLKP V +++ S +++ LP E D+ + + +E+P
Sbjct: 103 IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPD 162
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y+D+GGLD Q QE+ EAV LP+TH + + +GI PP+GVLLYGPPGTGKT+L +A A
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
T ++F+++ G + VQ ++G+G ++VRD F +A+E +PAIIFIDE+DAI TKRFD++
Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF T+++KVI ATNR D LDPALLR GRLDRKIEFP +
Sbjct: 283 DREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 342
Query: 355 AR-IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I + KM++SP+V+ + L + +GA A+ EAG+ A+R+ + D
Sbjct: 343 RRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLE 402
Query: 414 DAIM-EVQAKKKAN-LNYY 430
DA +V+ ++A+ L +Y
Sbjct: 403 DAYSAQVKTGQEADRLEFY 421
Score = 40 (19.1 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 4 PATATLEDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQ 59
P +LE + +G+E L+ + I + + +E + +K E++R E++
Sbjct: 26 PNIDSLEGTGADDGDEYATLKKLQRHLEYIKLQEEYIKDEQRSLKRELVRAQEEIK 81
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 147/283 (51%), Positives = 202/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 134 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 193
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 254 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I++IH+R M+V D+ +E L
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELL 373
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 374 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 146/295 (49%), Positives = 208/295 (70%)
Query: 128 VIGLVDA---EKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLD 184
V+ L D+ ++ G VGV+++ Y I LP + D V M+V+++P YSD+GG
Sbjct: 122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181
Query: 185 KQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 244
+QI++L E V P+ H EKFVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++
Sbjct: 182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 245 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 304
G +LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLE
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 305 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 364
L+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRK+EF P+++ R+ I +IH+R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARS 361
Query: 365 MNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
M+V D+ ++ L+R + GA+ ++VC EAGM A+R + T +DF++A+ +V
Sbjct: 362 MSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKV 416
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 169/414 (40%), Positives = 252/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 169/414 (40%), Positives = 252/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 169/414 (40%), Positives = 252/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 169/414 (40%), Positives = 252/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 47 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 106
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 107 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 164
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 165 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 224
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G
Sbjct: 225 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 284
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 285 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 344
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 345 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 404
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 405 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 458
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 169/414 (40%), Positives = 252/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 125 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 184
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 185 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 244
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 245 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 304
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 305 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 364
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 365 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 407
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 133 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 192
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 193 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 252
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 253 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 312
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 313 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 372
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 373 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 415
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 135 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 194
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 195 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 254
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 255 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 314
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 315 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 374
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 375 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 417
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 134 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 193
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 254 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 373
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 374 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 134 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 193
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 254 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 373
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 374 ARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 146/283 (51%), Positives = 201/283 (71%)
Query: 137 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVL 196
++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V
Sbjct: 134 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 193
Query: 197 PMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDG 256
P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+G
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 257 AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 316
A++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF
Sbjct: 254 ARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313
Query: 317 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEEL 376
+IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELL 373
Query: 377 SRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+R + GA+ ++VC EAGM A+R + T +DF++A+ +V
Sbjct: 374 ARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKV 416
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 152/316 (48%), Positives = 208/316 (65%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYL------ILETLPAEYDARVKAME 168
V+ +R+ +++P++ +VD + L+ LV V I+ L + D+ +
Sbjct: 114 VVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHK 173
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V++ P E + DIGG + QIQEL E+V LP+TH E + +GI PKGV+LYG PGTGKTLL
Sbjct: 174 VEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLL 233
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A T +TF++ G LVQ G+GA+LVR F +AKE+AP+I+FIDE+DA+GTKRF
Sbjct: 234 AKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRF 293
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
D+ G++EVQRT+LELLNQLDGF S D+K+I ATNR+D LDPAL+R GR+DRKIE P
Sbjct: 294 DTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPK 353
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVT 408
P+E+ R +I IH+ M + V YE + +GA+ KAVC EAGM+ALR V
Sbjct: 354 PDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVG 413
Query: 409 HEDFMDAIMEVQAKKK 424
+DF A+ V KK
Sbjct: 414 TDDFEKAVKSVMLSKK 429
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 169/414 (40%), Positives = 251/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+ + G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 169/414 (40%), Positives = 251/414 (60%)
Query: 21 LGDDILRMSTDDINSRT-RLLDN-EIKIMKS--------EVMRISHELQAQNEKIRENTE 70
LG D + D+ + + R LD +I ++K+ ++ ++ ++Q +KI E T
Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64
Query: 71 KIKVNKNL--PYL---VSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYF 125
+ + L P L ++ L P +++ D++ +K + +
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK--FV 122
Query: 126 LPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 185
+ + V ++ G VGV+++ Y I LP + D V M+V+E+P YSD+GG +
Sbjct: 123 VDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
Query: 186 QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 245
QI++L E V P+ H E+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+ + G
Sbjct: 183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIG 242
Query: 246 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 305
+LVQ ++G+GA++VR+ F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 243 SELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 302
Query: 306 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 365
+NQLDGF +IKV+ ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
+V D+ +E L+R + GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 146/277 (52%), Positives = 198/277 (71%)
Query: 143 VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKE 202
VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI++L E V P+ H E
Sbjct: 3 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 62
Query: 203 KFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRD 262
+FVNLGI+PPKGVLL+GPPGTGKTL ARA A +T + F+++ G +LVQ ++G+GA++VR+
Sbjct: 63 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 122
Query: 263 AFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIA 322
F +A+ K +IF DE+DAIG RFD GD EVQRTMLEL+NQLDGF +IKV+
Sbjct: 123 LFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLM 182
Query: 323 ATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDD 382
ATNR D LDPAL+R GRLDRKIEF P+ E R I +IH+R M+V D+ +E L+R +
Sbjct: 183 ATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPN 242
Query: 383 FNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
GA+ ++VC EAGM A+R I T +DF++A+ +V
Sbjct: 243 STGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 279
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 157/367 (42%), Positives = 230/367 (62%)
Query: 66 RENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGKCAVIKTSTRQTY 124
RE K+K ++ +V+ E + D + + G +V ++ Q ++K S Y
Sbjct: 29 REIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDNFIVKASNGPRY 88
Query: 125 FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLD 184
+ ++ EKLKPG V ++ + I+ LP E D V M ++ Y++IGGL
Sbjct: 89 VVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLG 148
Query: 185 KQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 244
+QI+EL E + LP+ + + F+ +GI PPKG LLYGPPGTGKTLLARA A+Q + FLK+
Sbjct: 149 QQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVV 208
Query: 245 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 304
+V +IG+ A+L+R+ FA A++ P IIF+DE+DAIG +RF + DRE+QRT++E
Sbjct: 209 SSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 268
Query: 305 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 364
LLNQ+DGF + +K+I ATNR D LDPALLR GRLDRK+E P PNE AR I++IH+
Sbjct: 269 LLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEP 328
Query: 365 MNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK 424
+N +++YE + + +D FNGA + +C EAG+ ALR V EDFM A+ ++ KK
Sbjct: 329 LNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKK 388
Query: 425 --ANLNY 429
+ L+Y
Sbjct: 389 LESRLDY 395
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 162/376 (43%), Positives = 233/376 (61%)
Query: 57 ELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVI 116
EL+++ +REN + K K+ ++ L V Q E + LD +R ++
Sbjct: 28 ELESRVSTVRENLKNAK--KDFTKTEDDLKSLQSVG-QIIGE--VLRPLDNER----FIV 78
Query: 117 KTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 176
K S+ Y + VD EKL G V ++ + I+ TLP E D V M ++
Sbjct: 79 KASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVS 138
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
YS +GGL QI+EL E++ LP+ + E F+ +GI+PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 139 YSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 198
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ FLK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DR
Sbjct: 199 DANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 258
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E+QRT++ELLNQLDGF +K+I ATNR D+LDPALLR GRLDRKIE P PNE+AR
Sbjct: 259 EIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARME 318
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAI 416
+++IH+ + +++YE + + + FNGA + VC EAGM A+R V HEDFM A+
Sbjct: 319 VLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAV 378
Query: 417 MEVQ-AKKKANLNYYA 431
++ AKK + +Y+
Sbjct: 379 RKLNDAKKLESSAHYS 394
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 153/307 (49%), Positives = 206/307 (67%)
Query: 128 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 182
V+GL E+L P D+ VGV++ Y I LP D V M V+E+P YSD+GG
Sbjct: 133 VVGL--GERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGG 190
Query: 183 LDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 242
+QI++L E V LP+ E+FV LGI PPKG+LLYGPPGTGKTL ARA A +T +TF++
Sbjct: 191 CKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 250
Query: 243 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 302
+ G +LVQ ++G+GA++VR+ F +A+ K IIF DE+DAIG RFD GD EVQRTM
Sbjct: 251 VIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTM 310
Query: 303 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
LEL+ QLDGF +IKV+ ATNR + LDPALLR GR+DRK+EF P+ E RA I +IHS
Sbjct: 311 LELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHS 370
Query: 363 RKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
+ M+V D+ +E +SR + GA+ ++VC EAGM A+R + +DF+ A+ +V
Sbjct: 371 KTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKAVDKVI-- 428
Query: 423 KKANLNY 429
K NL +
Sbjct: 429 -KGNLKF 434
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 164/379 (43%), Positives = 233/379 (61%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
+ YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IHS + D++YE + + +D FNGA + VC EAGM A+R VT EDF
Sbjct: 308 ARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 718 (257.8 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 137/302 (45%), Positives = 202/302 (66%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ ++T Y + ++ +D E LK V +++ S +++ LP E D+ + + D++P
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y+D+GGLD Q QE+ EAV LP+T + + +GI PP+GVLLYGPPGTGKT+L +A A
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
T ++F+++ G + VQ ++G+G ++VRD F LA+E +PAIIFIDE+DAI TKRFD++
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 271
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF T+ +KVI ATNR D LDPALLR GRLDRKIEFP +
Sbjct: 272 DREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
Query: 355 AR-IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I + KM+++P+ + + L D +GA A+ EAG+ A+R+ ++ D
Sbjct: 332 RRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLE 391
Query: 414 DA 415
+A
Sbjct: 392 EA 393
Score = 46 (21.3 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 24 DILRMSTDDINSRTRLLDNEIKIMKSEVMRI-SHELQAQN--EKIRENTEKIKVNKNLPY 80
D+L + + I R L E+ + EV RI S L E I ENT + Y
Sbjct: 42 DLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDENTGIVSSTTGSNY 101
Query: 81 LVSNVIELLD 90
+V ++ LD
Sbjct: 102 VV-RILSTLD 110
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 718 (257.8 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 137/302 (45%), Positives = 202/302 (66%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ ++T Y + ++ +D E LK V +++ S +++ LP E D+ + + D++P
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y+D+GGLD Q QE+ EAV LP+T + + +GI PP+GVLLYGPPGTGKT+L +A A
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
T ++F+++ G + VQ ++G+G ++VRD F LA+E +PAIIFIDE+DAI TKRFD++
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 271
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF T+ +KVI ATNR D LDPALLR GRLDRKIEFP +
Sbjct: 272 DREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
Query: 355 AR-IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I + KM+++P+ + + L D +GA A+ EAG+ A+R+ ++ D
Sbjct: 332 RRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLE 391
Query: 414 DA 415
+A
Sbjct: 392 EA 393
Score = 46 (21.3 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 24 DILRMSTDDINSRTRLLDNEIKIMKSEVMRI-SHELQAQN--EKIRENTEKIKVNKNLPY 80
D+L + + I R L E+ + EV RI S L E I ENT + Y
Sbjct: 42 DLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDENTGIVSSTTGSNY 101
Query: 81 LVSNVIELLD 90
+V ++ LD
Sbjct: 102 VV-RILSTLD 110
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 705 (253.2 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 133/302 (44%), Positives = 201/302 (66%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ ++T +Y + ++ +D E LKP V +++ S +++ LP + D+ + M +E+P
Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y+D+GGLD Q QE+ EAV LP+ + + +GI PP+GVLLYGPPGTGKT+L +A A
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
TK+ F+++ G + V ++G+G ++VRD F LA+E AP+IIFIDE+D+I TKRFD++
Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR ++ELL Q+DGF + ++KVI ATNR D LDPALLR GRLDRKIEFP +
Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 348
Query: 355 AR-IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFM 413
R I + KM+++P+ + + L D +GA A+ EAG+ A+R+ ++ D
Sbjct: 349 RRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLE 408
Query: 414 DA 415
+A
Sbjct: 409 EA 410
Score = 56 (24.8 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 24 DILRMSTDDINSRTRLLDNEIKIMKSEVMRI-SHELQAQN--EKIRENTEKIKVNKNLPY 80
++L + D I R L E+K + EV RI S L E I +NT + + Y
Sbjct: 59 ELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSY 118
Query: 81 LVSNVIELLD 90
+V ++ LD
Sbjct: 119 VV-RILSTLD 127
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 143/319 (44%), Positives = 212/319 (66%)
Query: 114 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 173
A++ ++T Y + ++ +D E LKP V + + S +++ LP E D+ + + DERP
Sbjct: 70 AIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERP 129
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
Y+D+GGLD Q QE+ EAV LP+T + + +GI PP+GVLLYGPPGTGKT+L +A A
Sbjct: 130 DVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVA 189
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
T + F+++ G + VQ ++G+G ++VRD F +A+E APAIIFIDE+DAI TKRFD++
Sbjct: 190 NSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTG 249
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
DREVQR ++ELL Q+DGF A++KVI ATNR D LDPALLR GRLDRKIEFP +
Sbjct: 250 ADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRR 309
Query: 354 RARIM-QIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
+ R++ Q + KM +SP+V+ + D +GAQ A+ +AG++A+R+ ++ D
Sbjct: 310 QRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDI 369
Query: 413 MDAIMEVQAKKKANLNYYA 431
+A +A K ++ +A
Sbjct: 370 EEAY--ARAVKPTDMEQFA 386
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 147/317 (46%), Positives = 210/317 (66%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K S+ Y + VD EKL G V ++ + I+ LP E D V M ++
Sbjct: 76 IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 135
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
YS +GGL QI+EL E++ LP+ + E F+ +GI+PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+ FLK+ ++ +IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF +
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DRE+QRT++ELLNQLDGF + +K+I ATNR D+LDPALLR GRLDRKIE P PNE++R
Sbjct: 256 DREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I++IH+ + +++YE + + + FNGA + +C EAGM A+R V HEDFM
Sbjct: 316 MDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMK 375
Query: 415 AIMEV-QAKKKANLNYY 430
A+ ++ +AKK + ++Y
Sbjct: 376 AVRKLSEAKKLESSSHY 392
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 147/317 (46%), Positives = 209/317 (65%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K S+ Y + VD EKL G V ++ + I+ LP E D V M ++
Sbjct: 76 IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 135
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
YS +GGL QI+EL E++ LP+ + E F+ +GI+PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+ FLK+ ++ +IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF +
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DRE+QRT++ELLNQLDGF +K+I ATNR D+LDPALLR GRLDRKIE P PNE++R
Sbjct: 256 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I++IH+ + +++YE + + + FNGA + +C EAGM A+R V HEDFM
Sbjct: 316 MEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMK 375
Query: 415 AIMEV-QAKKKANLNYY 430
A+ ++ +AKK + ++Y
Sbjct: 376 AVRKLSEAKKLESSSHY 392
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 150/310 (48%), Positives = 207/310 (66%)
Query: 128 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 182
V+GL E++ P D+ VGV++ Y I LP D V M V+E+P YSD+GG
Sbjct: 156 VVGL--GERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGG 213
Query: 183 LDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 242
QI++L E V LP+ E+F LGI PPKG+LLYGPPGTGKTL ARA A +T +TF++
Sbjct: 214 CKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 273
Query: 243 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 302
+ G +LVQ ++G+GA++VR+ F +A+ K IIF DE+DA+G RFD GD EVQRTM
Sbjct: 274 VIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTM 333
Query: 303 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
LEL+ QLDGF +IKV+ ATNR + LDPALLR GR+DRK+EF P+ E RA I +IHS
Sbjct: 334 LELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHS 393
Query: 363 RKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA- 421
+ M+V + +E +SR + GA+ ++VC EAGM A+R + T +DF+ A+ +V +
Sbjct: 394 KSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISG 453
Query: 422 -KKKANLNYY 430
KK ++ + Y
Sbjct: 454 YKKFSSTSRY 463
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 15 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 73
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 74 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 133
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 134 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 193
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 194 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 254 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 313
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 314 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 373
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 374 MKAVRKVADSKKLESKLDY 392
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 81
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 82 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 141
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 142 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 381
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 382 MKAVRKVADSKKLESKLDY 400
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 1 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 59
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 60 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 119
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 120 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 179
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 180 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 239
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 240 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 299
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 300 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 359
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 360 MKAVRKVADSKKLESKLDY 378
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 81
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 82 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 141
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 142 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 381
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 382 MKAVRKVADSKKLESKLDY 400
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 81
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 82 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 141
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 142 GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 381
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 382 MKAVRKVADSKKLESKLDY 400
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 161/379 (42%), Positives = 231/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA + VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 143/295 (48%), Positives = 201/295 (68%)
Query: 135 EKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAV 194
E L D + V+++ Y I+ LP + D V M V+++P Y D+GG +QI++L E V
Sbjct: 142 EDLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVV 201
Query: 195 VLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIG 254
+P+ E+FVNLGI PPKG LLYGPPGTGKTL ARA A +T +TF+++ G +LVQ ++G
Sbjct: 202 EMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 261
Query: 255 DGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSS 314
+GA++VR+ F +A+ K IIF DE+DA+G RFD GD EVQRTMLEL+ QLDGF +
Sbjct: 262 EGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 321
Query: 315 TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYE 374
+IKV+ ATNR LDPAL+R GR+DRKIEF P+ E RA I++IH++ M+V D+ +E
Sbjct: 322 RGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWE 381
Query: 375 ELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKKANLNY 429
+SR + GA+ ++V EAGM A+R + T +DF+ A+ +V K NL +
Sbjct: 382 LISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKVI---KGNLKF 433
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 165/411 (40%), Positives = 247/411 (60%)
Query: 28 MSTDDINSRTR--LLDNEIKIMKSEVMR-ISHELQAQNEKIRENTEKI--KVNKNLPYLV 82
+ T++ N + L + +I+++KS + EL A I+E+TE + ++N +
Sbjct: 14 VDTEEENDKNPPPLDEGDIELLKSYATGPYARELAA----IKEDTEAVLKRINDTVGIKE 69
Query: 83 SNV----IELLDV--DPQDTEEDGAV-------VDLDAQRKGKCAVIKTSTRQTYFLPVI 129
S+ I DV D Q E+ + + + Q K A + + F+ +
Sbjct: 70 SDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSL 129
Query: 130 G-LVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQ 188
G V ++ G VG +++ Y I LP + D V M+V+E+P Y D+GG +QI+
Sbjct: 130 GERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIE 189
Query: 189 ELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 248
L E V LP+ E+FV LGI PPKG++LYGPPGTGKTL ARA A +T +TF+++ G +L
Sbjct: 190 RLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSEL 249
Query: 249 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 308
VQ ++G+GA++VR+ F +A+ K IIF DE+DAIG RFD GD EVQRTMLEL+ Q
Sbjct: 250 VQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQ 309
Query: 309 LDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 368
LDGF +IKV+ ATNR + LD AL+R GR+DRK+EF P+ E RA I++IH++ M +
Sbjct: 310 LDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAID 369
Query: 369 PDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
D+ +E ++R GA+ ++VC EAGM A+R + T +DF+DA+ +V
Sbjct: 370 KDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKV 420
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 148/317 (46%), Positives = 205/317 (64%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K + Y + +D KLK G V ++ + I+ LP E D V M ++
Sbjct: 78 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 137
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
YS IGGL QI+EL E + LP+ + E F+ +GI PPKG LLYGPPGTGKTLLARA A+
Sbjct: 138 VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVAS 197
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
Q + FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF +
Sbjct: 198 QLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 257
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DRE+QRT++ELLNQ+DGF S +K+I ATNR D LDPALLR GRLDRKIE P PNE+AR
Sbjct: 258 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQAR 317
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I++IH+ K+ +++YE + + +D+FNGA + VC EAG+ A+R V DFM
Sbjct: 318 LEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMK 377
Query: 415 AIMEVQAKKK--ANLNY 429
A+ +V KK + L+Y
Sbjct: 378 AVRKVSDNKKLESKLDY 394
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 161/379 (42%), Positives = 230/379 (60%)
Query: 58 LQAQNEKIRENTE---KIK-VNKNLPYLVSNVIELLDVDPQDTEEDGAVV-DLDAQRKGK 112
LQ +K+ E+ E ++K + + L L E + D + + G +V ++ Q +
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQY-EKSENDLKALQSVGQIVGEVLKQLTEE 67
Query: 113 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDER 172
++K + Y + +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 68 KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
YS+IGGL +QI+EL E + LP+T+ E F +GI PPKG LLYGPPGTGKTLLARA
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A+Q FLK+ +V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
+ DRE+QRT++ELLNQ+DGF + +K+I ATNR D LDPALLR GRLDRKI PNE+
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 353 ARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
AR I++IH+ + +++YE + + +D FNGA VC EAGM A+R V EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDF 367
Query: 413 MDAIMEVQAKKK--ANLNY 429
M A+ +V KK + L+Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 164/385 (42%), Positives = 239/385 (62%)
Query: 44 IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDP-QDTEEDGAV 102
+K++K E RI L + E IR N E++K P E VD + T +V
Sbjct: 60 LKLLKLE--RIKDYLLMEEEFIR-NQEQMK-----PLEEKQEEERSKVDDLRGTSM--SV 109
Query: 103 VDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDA 162
V L+ G ++ TS +++ ++ VD + L+PG +N + ++ + D
Sbjct: 110 VTLEEIIDGNHVIVSTSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDDTDP 169
Query: 163 RVKAMEVDE---RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYG 219
V M+V++ P E Y+DI GLD QIQE+ E++ LP+TH E + +GI+PPKGV+LYG
Sbjct: 170 LVTVMKVEKVEKAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYG 229
Query: 220 PPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 279
PPGT K A A +T +TFL++AG +L+Q ++GDG K+VR++F +A+E AP+I+FIDE
Sbjct: 230 PPGTVK-----AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDE 284
Query: 280 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGR 339
+DAIGT+R+DS G+RE+QRTMLELLNQLDGF S D+KVI ATNR+ LDPAL
Sbjct: 285 IDAIGTRRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAA 344
Query: 340 LDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIA 399
L ++ P P+E+ + I QIH+ +M ++ DV + L + DD +GA KA+C EAG++A
Sbjct: 345 LTGRLS-PLPDEKTKKHIFQIHTSRMTLADDVTLD-LIMAKDDLSGADIKAICTEAGLMA 402
Query: 400 LRRGAAIVTHEDFMDAIMEVQAKKK 424
LR VT+EDF + V KK+
Sbjct: 403 LREHRMKVTNEDFKKSKENVLYKKQ 427
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 170/406 (41%), Positives = 246/406 (60%)
Query: 31 DDINSRTRLLDNE-IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELL 89
++ N++++ LD+E I I+KS S +K+ + + VN N V L
Sbjct: 3 EETNTQSKPLDDEDINILKSYG---SGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGL 59
Query: 90 DVDPQ-DTEEDGAVVDLDAQRK-GKCA-VIKTSTRQTYFLP--------VIGLVDAEKLK 138
+ Q D + D +++ + + +C +I T QT ++ V+GL D K+
Sbjct: 60 CLPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGD--KVA 117
Query: 139 PGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEA 193
P D+ VGV++ Y I LP + D V M V+E+P Y+DIGG +Q+++L E
Sbjct: 118 PSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREV 177
Query: 194 VVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFI 253
V +P+ E+FV LGI PPKGVLLYGPPGTGKTL ARA A +T + F+ + G +LVQ ++
Sbjct: 178 VEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYV 237
Query: 254 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 313
G+GA++VR+ F +AK K I+FIDE+DAIG R D GD EVQRTMLE++NQLDGF
Sbjct: 238 GEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFD 297
Query: 314 STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNY 373
+ +IKV+ ATNR D LD AL+R GR+DR+IEF P+ E R I +IH+ MN+S DV +
Sbjct: 298 NRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF 357
Query: 374 EELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
E L+R + G+ ++VC EAGM A+R +T +D + AI +V
Sbjct: 358 ELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKV 403
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 170/406 (41%), Positives = 246/406 (60%)
Query: 31 DDINSRTRLLDNE-IKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELL 89
++ N++++ LD+E I I+KS S +K+ + + VN N V L
Sbjct: 3 EETNTQSKPLDDEDINILKSYG---SGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGL 59
Query: 90 DVDPQ-DTEEDGAVVDLDAQRK-GKCA-VIKTSTRQTYFLP--------VIGLVDAEKLK 138
+ Q D + D +++ + + +C +I T QT ++ V+GL D K+
Sbjct: 60 CLPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGD--KVA 117
Query: 139 PGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEA 193
P D+ VGV++ Y I LP + D V M V+E+P Y+DIGG +Q+++L E
Sbjct: 118 PSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREV 177
Query: 194 VVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFI 253
V +P+ E+FV LGI PPKGVLLYGPPGTGKTL ARA A +T + F+ + G +LVQ ++
Sbjct: 178 VEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYV 237
Query: 254 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 313
G+GA++VR+ F +AK K I+FIDE+DAIG R D GD EVQRTMLE++NQLDGF
Sbjct: 238 GEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFD 297
Query: 314 STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNY 373
+ +IKV+ ATNR D LD AL+R GR+DR+IEF P+ E R I +IH+ MN+S DV +
Sbjct: 298 NRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF 357
Query: 374 EELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEV 419
E L+R + G+ ++VC EAGM A+R +T +D + AI +V
Sbjct: 358 ELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKV 403
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 154/387 (39%), Positives = 235/387 (60%)
Query: 46 IMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-D 104
I++ E + + + + + R+ +K+K + ++ + + D + + G +V +
Sbjct: 17 IVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGE 76
Query: 105 LDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARV 164
+ Q + ++K + Y + ++ E+LK G V ++ + I+ LP E D V
Sbjct: 77 VLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLV 136
Query: 165 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
M ++ YSD+GGL +QI+EL E V LP+ + E F +GI PPKG LL+GPPGTG
Sbjct: 137 YKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTG 196
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTLLARA A+Q FLK+ +V +IG+ A+++R+ F A++ P I+F+DE+DAIG
Sbjct: 197 KTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG 256
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
+RF + DRE+QRT++ELLNQLDGF S +KVI ATNR D LDPALLR GRLDRKI
Sbjct: 257 GRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKI 316
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
E PNE++R I++IHS K+ ++++E + + +D F+ A + VC EAGM A+R
Sbjct: 317 EIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAER 376
Query: 405 AIVTHEDFMDAIMEV-QAKK-KANLNY 429
V EDFM A+ +V AK+ + L+Y
Sbjct: 377 EFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 154/387 (39%), Positives = 235/387 (60%)
Query: 46 IMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVV-D 104
I++ E + + + + + R+ +K+K + ++ + + D + + G +V +
Sbjct: 17 IVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGE 76
Query: 105 LDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARV 164
+ Q + ++K + Y + ++ E+LK G V ++ + I+ LP E D V
Sbjct: 77 VLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLV 136
Query: 165 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
M ++ YSD+GGL +QI+EL E V LP+ + E F +GI PPKG LL+GPPGTG
Sbjct: 137 YKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTG 196
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTLLARA A+Q FLK+ +V +IG+ A+++R+ F A++ P I+F+DE+DAIG
Sbjct: 197 KTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG 256
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
+RF + DRE+QRT++ELLNQLDGF S +KVI ATNR D LDPALLR GRLDRKI
Sbjct: 257 GRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKI 316
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
E PNE++R I++IHS K+ ++++E + + +D F+ A + VC EAGM A+R
Sbjct: 317 EIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAER 376
Query: 405 AIVTHEDFMDAIMEV-QAKK-KANLNY 429
V EDFM A+ +V AK+ + L+Y
Sbjct: 377 EFVIDEDFMKAVRKVGDAKRLETKLDY 403
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 158/395 (40%), Positives = 231/395 (58%)
Query: 47 MKSEVMRISHELQAQNEKIRENTE-KIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDL 105
M +E + LQ +++ E+ ++++NK +I+ L D Q TE+ +
Sbjct: 1 MSTEETKKEQALQNYRDRLIEHKNAELRLNK-----AHELIKKLKKDFQKTEDHIKTIQY 55
Query: 106 DAQRKGKCA--------VIKTSTRQTYFLPVIGLVD-AEKLKPGDLVGVNKDSYLILETL 156
+ G+ ++K Y + D A L PG V ++ + IL+ L
Sbjct: 56 IGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKIL 115
Query: 157 PAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVL 216
P E D + M + + Y +IGGL QI+EL E V LP+ E F+ +GI+ PKGVL
Sbjct: 116 PREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVL 175
Query: 217 LYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIF 276
LYGPPGTGKTLLARA A+ ++ FLK+ +V +IG+ A+++R+ F A++ P +IF
Sbjct: 176 LYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIF 235
Query: 277 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLR 336
+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF + + +K+I ATNR D+LDPALLR
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLR 295
Query: 337 SGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAG 396
GRLDRKIE P PNE R +++IH+ + DV+YE +++ D FN A + VC EAG
Sbjct: 296 PGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAG 355
Query: 397 MIALRRGAAIVTHEDFMDAIMEVQAKKK--ANLNY 429
M A+R V EDFM A+ + Q KK L+Y
Sbjct: 356 MFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDY 390
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 145/317 (45%), Positives = 204/317 (64%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K S+ Y + VD KLK G V ++ + I+ LP E D V M +++
Sbjct: 74 IVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQ 133
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
++ IGGL+ QI+EL E + LP+ + E F +GI+PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
++ FLK+ +V +IG+ A+L+R+ F AKE P IIF+DE+DAIG +RF +
Sbjct: 194 SMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DRE+QRT++ELLNQLDGF K+I ATNR D LDPALLR+GRLDRKIE P PNE R
Sbjct: 254 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 313
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I++IHS + + D+++E + + +D NGA + V EAG+ A++ + +DF
Sbjct: 314 LEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFNR 373
Query: 415 AIMEV-QAKK-KANLNY 429
A+ +V +AKK + L Y
Sbjct: 374 AVRKVAEAKKLEGKLEY 390
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 160/394 (40%), Positives = 237/394 (60%)
Query: 40 LDNE--IKIMKSEVMRISH-ELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDT 96
+DN+ IK+ +V I H E++++ +K+R + +++ NK N+ L V
Sbjct: 1 MDNKESIKLYVKKV--IEHREIESKVKKLRLDIKEL--NKKYEKTEDNLKALQSVG---- 52
Query: 97 EEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETL 156
+ G V+ Q + + ++K S+ Y + ++ KL G V ++ + +++ L
Sbjct: 53 QIIGQVLK---QLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRL 109
Query: 157 PAEYDARVKAM--EVD--ERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQ 210
P E D V M ++D E T + Y+ IGGL +QI+++ E V LP+ + + +GI+
Sbjct: 110 PCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIK 169
Query: 211 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 270
PKGVLLYGPPGTGKTLLARA A+ F+++ +V +IG+ A+++R+ F AKE
Sbjct: 170 TPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEH 229
Query: 271 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 330
P IIF+DE+DAIG +RF + DRE+QRT++ELLN LDGF ++K+I ATNR D+L
Sbjct: 230 QPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVL 289
Query: 331 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKA 390
DPAL+R GRLDRKIE P PNE AR I++IH+ KM D++YE + R D FNGA +
Sbjct: 290 DPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRN 349
Query: 391 VCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK 424
VC EAGM A+R V EDF A ++ KK
Sbjct: 350 VCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKK 383
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 160/394 (40%), Positives = 237/394 (60%)
Query: 40 LDNE--IKIMKSEVMRISH-ELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDT 96
+DN+ IK+ +V I H E++++ +K+R + +++ NK N+ L V
Sbjct: 1 MDNKESIKLYVKKV--IEHREIESKVKKLRLDIKEL--NKKYEKTEDNLKALQSVG---- 52
Query: 97 EEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETL 156
+ G V+ Q + + ++K S+ Y + ++ KL G V ++ + +++ L
Sbjct: 53 QIIGQVLK---QLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRL 109
Query: 157 PAEYDARVKAM--EVD--ERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQ 210
P E D V M ++D E T + Y+ IGGL +QI+++ E V LP+ + + +GI+
Sbjct: 110 PCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIK 169
Query: 211 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 270
PKGVLLYGPPGTGKTLLARA A+ F+++ +V +IG+ A+++R+ F AKE
Sbjct: 170 TPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEH 229
Query: 271 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 330
P IIF+DE+DAIG +RF + DRE+QRT++ELLN LDGF ++K+I ATNR D+L
Sbjct: 230 QPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVL 289
Query: 331 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKA 390
DPAL+R GRLDRKIE P PNE AR I++IH+ KM D++YE + R D FNGA +
Sbjct: 290 DPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRN 349
Query: 391 VCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK 424
VC EAGM A+R V EDF A ++ KK
Sbjct: 350 VCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKK 383
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 681 (244.8 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 150/351 (42%), Positives = 208/351 (59%)
Query: 89 LDVDPQDTEED-------GAVV-DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPG 140
LD D + TE D G ++ ++ Q + ++KTS+ Y + + E LK G
Sbjct: 75 LDKDYEKTENDIKALQSVGQIIGEVLKQLDDERYIVKTSSGPRYIVGCRNTIKKENLKNG 134
Query: 141 DLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTH 200
V ++ + I+ LP E D V M E ++ IGGL +QI+EL E + LP+ +
Sbjct: 135 VRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKN 194
Query: 201 KEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 260
E F +GI+PPKGVLLYGPPGTGKTLLA+A AA + F+ +V +IG+ A+L+
Sbjct: 195 PELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLI 254
Query: 261 RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKV 320
R+ FA AKE P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF + K+
Sbjct: 255 REMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKI 314
Query: 321 IAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRST 380
I ATNR D LDPALLR+GRLDRKIE PNE R I +IH+ K+ + ++E + +
Sbjct: 315 IMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMS 374
Query: 381 DDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAKKK--ANLNY 429
D FNGA + V EAG A+R + D M A+ +V KK L+Y
Sbjct: 375 DGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMKAVRKVADVKKLEGKLDY 425
Score = 40 (19.1 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 26 LRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQ 61
LR+S D++ +N+IK ++S V +I E+ Q
Sbjct: 68 LRLSIRDLDKDYEKTENDIKALQS-VGQIIGEVLKQ 102
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 146/326 (44%), Positives = 202/326 (61%)
Query: 100 GAVV-DLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 158
G V+ LD++R ++K S+ Y + VD L G V ++ + I+ LP
Sbjct: 57 GEVLKQLDSER----FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPR 112
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E D V M +++ ++ +GGL++QI+EL E + LP+ + E F+ +GI+PPKGVLLY
Sbjct: 113 EVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLY 172
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLARA AA FLK+ +V +IG+ A+++R+ F AKE P +IF+D
Sbjct: 173 GPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMD 232
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DAIG +RF + DRE+QRT++ELLNQ+DGF K+I ATNR D LDPALLR G
Sbjct: 233 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPG 292
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMI 398
RLDRKIE P PNE R I++IH K++ +++YE L + TD NGA + V EAG I
Sbjct: 293 RLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFI 352
Query: 399 ALRRGAAIVTHEDFMDAIMEVQAKKK 424
A++ V D M A +V KK
Sbjct: 353 AIKEDRDYVIQSDLMSAARKVADLKK 378
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 674 (242.3 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 136/312 (43%), Positives = 191/312 (61%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++ + T + ++ +D E LKP V ++K S ++ LP E ++ + + D++P
Sbjct: 51 IVGSITGSNCYFCILSTIDQELLKPNASVALHKHSNTLVNVLPPEAESSIMMLTSDQKPN 110
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
Y+DIG +D Q QE+ EA+ LP+TH E + +GI PP+GVL+YGPPG GKT+LA+ A
Sbjct: 111 VIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAH 170
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+ F+ + G + V ++G+G +++ D F L KE APAIIFIDE+DAI TKRFD++
Sbjct: 171 HMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQTGA 230
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DREVQR +LELLNQ+DGF +K I ATNR D LDP LLR G LD KIEFP P+ R
Sbjct: 231 DREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHRKR 290
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I S KMN+S +VN E+ D +GA ++C E+GM+ + I +DF
Sbjct: 291 LIFSTITS-KMNLSEEVNVEDYVACPDKISGADINSICQESGMLTVCENCHIFLAKDFKK 349
Query: 415 AIMEVQAKKKAN 426
A V KK N
Sbjct: 350 AYKTVI--KKVN 359
Score = 39 (18.8 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 70 EKIKVNKNLPYLVSNVIELLD 90
EK+K +++P ++ +E +D
Sbjct: 26 EKVKQIQSIPLVIGQFLEAVD 46
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 139/310 (44%), Positives = 192/310 (61%)
Query: 115 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 174
++K S+ Y + V VD KLK G V ++ + I+ LP E D V M E+
Sbjct: 118 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 177
Query: 175 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAA 234
+ IGGL +QI+EL E + LP+ + E F +GI+PPKGVLLYGPPGTGKTLLA+A AA
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 235 QTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 294
+ F+ +V +IG+ A+++R+ FA AKE P IIF+DE+DAIG +RF +
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297
Query: 295 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEAR 354
DRE+QRT++ELL Q+DGF + K+I ATNR D LDPALLR GRLDRK+E P PNE R
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
Query: 355 ARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I +IH+ K+ + + ++E + +D FNGA + EAG A+R + +D M
Sbjct: 358 LEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMK 417
Query: 415 AIMEVQAKKK 424
A+ +V KK
Sbjct: 418 AVRKVAEVKK 427
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 116/242 (47%), Positives = 158/242 (65%)
Query: 82 VSNVIELLDVDPQDTEEDGAVVD--LDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 139
VS+ + LL + Q +E G+ V + A K K ++K + + V +D + P
Sbjct: 3 VSHPVRLLREELQLLQEQGSYVGEVVRAMDKKK-VLVKVHPEGKFVVDVDKNIDINDVTP 61
Query: 140 GDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMT 199
V + DSY + + LP + D V M V++ P Y IGGLDKQI+E+ E + LP+
Sbjct: 62 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 121
Query: 200 HKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKL 259
H E F LGI PKGVLLYGPPGTGKTLLARA A T TF++++G +LVQ FIG+GA++
Sbjct: 122 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARM 181
Query: 260 VRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIK 319
VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQRTMLELLNQLDGF +T +IK
Sbjct: 182 VRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIK 241
Query: 320 VI 321
V+
Sbjct: 242 VM 243
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 521 (188.5 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 112/274 (40%), Positives = 164/274 (59%)
Query: 161 DARVKAM-EVD-ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
D R AM EV + P +SDIGGL+ +L +AV P+ H E F+ +GIQPPKGVLLY
Sbjct: 608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLY 667
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F A+ +P+IIF D
Sbjct: 668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFD 727
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
ELDA+ +R S AG+ R + +LL ++DG D+ ++AATNR D +D AL+R G
Sbjct: 728 ELDALAIERGSSSGAGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPG 786
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMI 398
R+DR I P P+ R I+ + M +S DVN +EL TD ++GA+ AVC EA ++
Sbjct: 787 RIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALL 846
Query: 399 ALRRG--AAIVTHEDFMDAIMEVQAKKKANLNYY 430
AL A +T F A+ V + +L +
Sbjct: 847 ALEEDIQANSITRRHFTRALSTVTPRISKSLRRF 880
Score = 434 (157.8 bits), Expect = 6.9e-40, P = 6.9e-40
Identities = 104/277 (37%), Positives = 153/277 (55%)
Query: 131 LVDAEKLKPGDLVGV--NKDS-YLILETLPAEY-DARVKAMEVDERPTEQYSDIGGLDKQ 186
L++ E+L VG N D Y I T + + E D + Y IGGL Q
Sbjct: 302 LINEERLLKSACVGAKCNTDIFYFISSTTRINFIKVHTNSEEEDNQFKVTYDMIGGLSSQ 361
Query: 187 IQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 246
++ + E + LP+ E F + GI PP+GVLLYGPPGTGKT++ARA A + + + GP
Sbjct: 362 LKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGP 421
Query: 247 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 306
+++ F G+ +R FA A + P+IIFIDELDA+ KR ++ ++ V ++L L+
Sbjct: 422 EIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLM 481
Query: 307 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ-IHSRKM 365
+ + S + V+ ATNR LD AL R GR D++IE PN R I+Q + R
Sbjct: 482 DGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVP 541
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
++ +V +L+ S + GA KA+C EAG+ ALRR
Sbjct: 542 HLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR 578
Score = 47 (21.6 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 138 KPGDLVGVNKDSYLILETLPAEYDAR-VKAMEVDERPTEQYSDIGGLDKQIQE 189
KP D +NKDS ++L+ D+ + +EV E S GG ++ I E
Sbjct: 253 KPVDDRMINKDSDILLDVTQNHGDSSGLGLVEVTELKCSFESARGGNEQLINE 305
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 518 (187.4 bits), Expect = 3.9e-51, Sum P(2) = 3.9e-51
Identities = 106/261 (40%), Positives = 164/261 (62%)
Query: 171 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLAR 230
E P Q+SDIGG + + +A+ P+ H +KF LGI+PP+G+L++GPPG KT++A+
Sbjct: 528 ECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAK 587
Query: 231 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF-- 288
A A ++K FL + GP+L M++G+ + VR+ F A++ APAI+F DE+DAIG +R
Sbjct: 588 ALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEG 647
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
D +G +R + +LL +LDG + ++ ++AATNR D++D ALLR GR+DR +
Sbjct: 648 DGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGL 707
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG--AAI 406
P EAR I++I R M +S DV+ E+L + T+ ++GA+ +AVC EA + AL + A
Sbjct: 708 PQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAED 767
Query: 407 VTHEDFMDAIMEVQAKKKANL 427
V DF A+ V + L
Sbjct: 768 VKWTDFEHALKAVPPRTSPEL 788
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 74/273 (27%), Positives = 139/273 (50%)
Query: 138 KPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLP 197
KP + V + L L T A + + + ++ R T+ IGGLD+Q+Q + E++
Sbjct: 236 KPLQFIQVTNVTKLHLITDDA--NQQEEEQKISHRITK--CQIGGLDRQLQLVEESMEYA 291
Query: 198 MTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARA-CA-AQTKST----FLKLAGPQLVQM 251
+ + + G++ +G+LLYG G GK+++ A CA A+ +S +++ ++
Sbjct: 292 LGFRT--LPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSK 349
Query: 252 FIGDGAKLVRDAFALAKEKAP--AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 309
F+G+ + + F A P ++ I+++ + K+ +S+ + V L LL+QL
Sbjct: 350 FLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLV--KRVSLAFLSLLDQL 407
Query: 310 DGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ--IHSRKM 365
S K V+A ++++D L P++ R+GRLD ++E P+ +AR I++ I S +
Sbjct: 408 SSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEH 467
Query: 366 NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMI 398
+S D E ++ T + GA A V A M+
Sbjct: 468 QLS-DEEVEHVASITHGYVGADL-ANLVYAAML 498
Score = 39 (18.8 bits), Expect = 3.9e-51, Sum P(2) = 3.9e-51
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 26 LRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKI 65
L + TDD N + +I K ++ + +LQ E +
Sbjct: 249 LHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESM 288
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 113/267 (42%), Positives = 163/267 (61%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K M + R ++D+ G+D+ +ELIE V + H+++F LG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F K+ AP IIFIDE+D
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G R G+ E ++T+ +LL ++DGF S + +IAATNR D+LD ALLR GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+ +H +K+ +PDVN ++R T F+GA + EA +IA R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 402 RGAAIVTHEDF---MDAIMEVQAKKKA 425
IVT DF D +M + A++K+
Sbjct: 379 LNKKIVTMSDFEYARDKVM-MGAERKS 404
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 112/267 (41%), Positives = 165/267 (61%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R + M D R + D+ G+++ +ELIE V + H++KF LG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F K+ AP IIF+DE+D
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G R G+ E ++T+ +LL ++DGF S + +IAATNR D+LDPALLR GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+ +H++K+ ++PDV+ ++R T F+GA + EA +IA R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 402 RGAAIVTHEDF---MDAIMEVQAKKKA 425
IVT DF D +M + A++K+
Sbjct: 381 LDKKIVTMCDFEYARDKVM-MGAERKS 406
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 112/267 (41%), Positives = 165/267 (61%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R + M D R + D+ G+++ +ELIE V + H++KF LG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F K+ AP IIF+DE+D
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G R G+ E ++T+ +LL ++DGF S + +IAATNR D+LDPALLR GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+ +H++K+ ++PDV+ ++R T F+GA + EA +IA R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 402 RGAAIVTHEDF---MDAIMEVQAKKKA 425
IVT DF D +M + A++K+
Sbjct: 381 LDKKIVTMCDFEYARDKVM-MGAERKS 406
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 113/267 (42%), Positives = 163/267 (61%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K M + R ++D+ G+D+ +ELIE V + H+++F LG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F K+ AP IIFIDE+D
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G R G+ E ++T+ +LL ++DGF S + +IAATNR D+LD ALLR GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+ +H +K+ +PDVN ++R T F+GA + EA +IA R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 402 RGAAIVTHEDF---MDAIMEVQAKKKA 425
IVT DF D +M + A++K+
Sbjct: 379 LNKKIVTMSDFEYARDKVM-MGAERKS 404
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 523 (189.2 bits), Expect = 8.4e-50, P = 8.4e-50
Identities = 139/421 (33%), Positives = 224/421 (53%)
Query: 23 DDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRE--NTEKIKVNKNLPY 80
+D+ + + + LLD K V+ ++ + +E +R EK ++ +P
Sbjct: 390 EDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEK-EIEIGIPD 448
Query: 81 LVS--NVIELLDVDPQDTEEDGAVVDLDAQRKGKC-AVIKTSTRQTYFLPVIGLVDAEKL 137
+ ++I+LL + D + DL ++ A + R+ + + +K
Sbjct: 449 KSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKD 508
Query: 138 KPG-DLVG-VNKDSYLILETLPAEYDARVKAME--VDERPTEQYSDIGGLDKQIQELIEA 193
G D+ G V D LE A R AM + E P +SDIGG ++ Q+L E+
Sbjct: 509 TSGLDIFGAVQMDD---LEF--ALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKES 563
Query: 194 VVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFI 253
V P+TH E F LG++PPKGVLLYGPPG KT+ A+A A +T F+ + GP+L F+
Sbjct: 564 VEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFV 623
Query: 254 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 313
G+ + VR F A++ +P++IF DE+DA+ R + D R + LLN+LDG
Sbjct: 624 GESERAVRQVFQKARQASPSVIFFDEIDALTANRGE-----DNSSDRVVAALLNELDGIE 678
Query: 314 STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNY 373
+ ++ V+AATNR D++DPAL+R GRLDR + PN EAR +I++I + KM + DV+
Sbjct: 679 ALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDL 738
Query: 374 EELSRSTDDFNGAQCKAVCVEAGMIALRRG--AAIVTHEDFMDAIMEVQ-AKKKANLNYY 430
+ ++ T+ +GA+ A+C EAG+IA+ A + F A++ ++ A + L YY
Sbjct: 739 DLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYY 798
Query: 431 A 431
A
Sbjct: 799 A 799
Score = 405 (147.6 bits), Expect = 7.0e-37, P = 7.0e-37
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+S IGGL QI ++ + V LP + E F I PP+GVLLYGPPGTGKT++ RA AA+
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ + GP +V ++G+ +R F A+ P+IIFIDE+DA+ KR +E +
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKR--TEDVSEA 395
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E R + LL LDG ++ + VIAATNR + +D AL R GRL+++IE P++ AR
Sbjct: 396 E-SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLD 454
Query: 357 IMQIH-SRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDA 415
I+++ S N D E+L+ T + GA AV EA + A++R ++ +D
Sbjct: 455 IIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLDI 514
Query: 416 IMEVQ 420
VQ
Sbjct: 515 FGAVQ 519
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 110/255 (43%), Positives = 159/255 (62%)
Query: 162 ARVKAM-EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGP 220
+R K + E R T + D+ G+D+ +EL E ++ + +KF LG + PKGVLL GP
Sbjct: 138 SRAKLLTEAQGRVT--FEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGP 194
Query: 221 PGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDEL 280
PGTGKTLLARA A + F ++G V+MF+G GA VRD F K+ AP IIFIDE+
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 281 DAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRL 340
DA+G R G E ++T+ +LL ++DGF S + +IAATNR D+LDPALLR GR
Sbjct: 255 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRF 314
Query: 341 DRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIAL 400
DR++ P P+ + R I+++H++K ++ DV+ ++R T F+GA V EA ++A
Sbjct: 315 DRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAA 374
Query: 401 RRGAAIVTHEDFMDA 415
R+ + V +DF DA
Sbjct: 375 RKDKSFVEMKDFDDA 389
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 105/239 (43%), Positives = 153/239 (64%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G+D+ +EL E +V + + +KF LG + PKG LL GPPGTGKTLLARA A +
Sbjct: 155 FDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 213
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F ++G V+MF+G GA VRD F AK+ AP I+FIDE+DA+G R G+
Sbjct: 214 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGND 273
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E ++T+ +LL ++DGF + + ++AATNR D+LDPALLR GR DR + +P+ + R +
Sbjct: 274 EREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREK 333
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDA 415
I+ +H+RK + PDV+ ++R T F+GA + EA ++A R G VT EDF +A
Sbjct: 334 ILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENA 392
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 105/239 (43%), Positives = 153/239 (64%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G+D+ +EL E +V + + +KF LG + PKG LL GPPGTGKTLLARA A +
Sbjct: 155 FDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 213
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F ++G V+MF+G GA VRD F AK+ AP I+FIDE+DA+G R G+
Sbjct: 214 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGND 273
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E ++T+ +LL ++DGF + + ++AATNR D+LDPALLR GR DR + +P+ + R +
Sbjct: 274 EREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREK 333
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDA 415
I+ +H+RK + PDV+ ++R T F+GA + EA ++A R G VT EDF +A
Sbjct: 334 ILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENA 392
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 519 (187.8 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 135/415 (32%), Positives = 222/415 (53%)
Query: 18 EESLGDDILRMSTD-DINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
+E++ DD +S D + +L + ++K + + + + +E E KI++NK
Sbjct: 34 DEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDE--PKIRMNK 91
Query: 77 ----NLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLV 132
NL + +VI + ++ LD +G I + + YFL
Sbjct: 92 VVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAY--- 148
Query: 133 DAEKLKPGDLV----GVNKDSYLILETLPAEY-----DARVKA------MEVDERPTEQ- 176
++ GDL G+ + ++ET PAEY D + E +ER E
Sbjct: 149 --RPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVG 206
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
Y D+GG+ KQ+ ++ E V LP+ H + F ++G++PPKG+LLYGPPG+GKTL+ARA A +T
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ F + GP+++ G+ +R AF A++ AP+IIFIDE+D+I KR EK
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGE 323
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
+R + +LL +DG S A + V+ ATNR + +DPAL R GR DR+I+ P+E R
Sbjct: 324 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 383
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
+++IH++ M ++ DV+ E +S+ T + GA A+C EA + +R ++ +D
Sbjct: 384 VLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
Score = 486 (176.1 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 99/233 (42%), Positives = 144/233 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+S R + +LL ++DG ++ + +I ATNR DI+DPALLR GRLD+ I P
Sbjct: 592 NSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 651
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+EE+R +I + RK V+ DV+ L++ T F+GA +C + A+R
Sbjct: 652 PDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 109/260 (41%), Positives = 163/260 (62%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ K +D +PT ++++ G+D+ QE+ E V + +EKF LG + PKG+LL GPP
Sbjct: 144 SKAKLFNMD-KPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPP 201
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + F ++G + V+MF+G GA VRD F AK+ AP IIFIDE+D
Sbjct: 202 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEID 261
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ ++L ++DGF + + VIAATNR DILDPALLR GR D
Sbjct: 262 AVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFD 321
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R I++IH++ ++ VN E L++ T F+GA + EA ++A R
Sbjct: 322 RRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAAR 381
Query: 402 RGAAIVTHEDFMDAIMEVQA 421
+ +V ED ++I V A
Sbjct: 382 KNRKVVETEDLEESIDRVIA 401
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 205 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 264
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 265 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 324
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 325 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 381
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 382 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 441
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 442 KMDLIDLED 450
Score = 486 (176.1 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 484 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 543
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 544 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 603
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 716
Score = 45 (20.9 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 10 EDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENT 69
E ++ G +S GDD+ N RL+ +E + V+ +S + + R +T
Sbjct: 13 EARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDT 72
Query: 70 EKIKVNK 76
+K K
Sbjct: 73 VLLKGKK 79
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 486 (176.1 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 486 (176.1 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 486 (176.1 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 486 (176.1 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 486 (176.1 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 498 (180.4 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 483 (175.1 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 96/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL + V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 44 (20.5 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 498 (180.4 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
Identities = 104/249 (41%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 475 (172.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 97/235 (41%), Positives = 148/235 (62%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSP--DVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ E L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 702
Score = 44 (20.5 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S GDD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 518 (187.4 bits), Expect = 3.0e-49, P = 3.0e-49
Identities = 127/367 (34%), Positives = 202/367 (55%)
Query: 61 QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTST 120
+ KIR N K+ V NL + +VI + + ++ +D +G + +
Sbjct: 82 EEPKIRMN--KV-VRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAY 138
Query: 121 RQTYFLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPAEY-----DARVKA----- 166
+ YFL ++ GDL G+ + ++ET PAEY D +
Sbjct: 139 LKPYFLEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPV 193
Query: 167 -MEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
E +ER E Y D+GG+ KQ+ ++ E V LP+ H + F ++G++PPKG+LLYGPPG+G
Sbjct: 194 KREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTL+ARA A +T + F + GP+++ G+ +R AF A++ AP+IIFIDE+D+I
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
KR EK +R + +LL +DG S A + V+ ATNR + +DPAL R GR DR+I
Sbjct: 314 PKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
+ P+E R +++IH++ M ++ DV+ E +S+ T + GA A+C EA + +R
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 405 AIVTHED 411
++ ED
Sbjct: 431 DVIDLED 437
Score = 479 (173.7 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 101/235 (42%), Positives = 145/235 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 289 DSEKAGDR--EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEF 346
+S AGD R + +LL ++DG ++ + +I ATNR DI+D ALLR GRLD+ I
Sbjct: 591 NS--AGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYI 648
Query: 347 PHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P P+E++R I + RK V+ DV+ L++ T F+GA +C A A+R
Sbjct: 649 PLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 520 (188.1 bits), Expect = 3.3e-49, P = 3.3e-49
Identities = 130/362 (35%), Positives = 199/362 (54%)
Query: 73 KVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLV 132
K+ + +P+L++ ELL + GA + + G CA+ + +Q P L
Sbjct: 535 KLLRRVPHLLTEA-ELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQ----P--NLP 587
Query: 133 DAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM-EVD-ERPTEQYSDIGGLDKQIQEL 190
D +K LV + +L A D R AM E+ + P +SDIGGL+ +L
Sbjct: 588 D---VKVAGLVKITLKDFL-----QAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKL 639
Query: 191 IEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 250
+AV P+ H E F+ +GIQPPKGVLLYGPPG KT++A+A A ++ FL + GP+L+
Sbjct: 640 EQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMN 699
Query: 251 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 310
++G+ + VR+ F A+ AP+IIF DELDA+ +R S AG+ R + +LL ++D
Sbjct: 700 KYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGN-VADRVLAQLLTEMD 758
Query: 311 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 370
G D+ ++AATNR D +D AL+R GR+DR I P P+ R I ++ M VS +
Sbjct: 759 GIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNE 818
Query: 371 VNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG--AAIVTHEDFMDAIMEVQAKKKANLN 428
V+ +EL TD ++GA+ AVC EA ++AL A ++ F A+ V + +L
Sbjct: 819 VDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLR 878
Query: 429 YY 430
+
Sbjct: 879 RF 880
Score = 414 (150.8 bits), Expect = 9.9e-38, P = 9.9e-38
Identities = 127/402 (31%), Positives = 201/402 (50%)
Query: 11 DSSIWEGEESLGD-DILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENT 69
D I G +S D D RM+ + + T L E+ + S++ +L+ +T
Sbjct: 199 DGMILGGPQSDSDTDAQRMAFEQSSMETSSL--ELSLQLSQL-----DLEDTQIPTSRST 251
Query: 70 EKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVI 129
++ + S+V LLDV + DG+ + L+ KC S R+
Sbjct: 252 PYKPIDDRITNKASDV--LLDVT--QSPGDGSGLMLEEVTGLKCNF--ESAREGNEQ--- 302
Query: 130 GLVDAEKLKPGDL-VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ-------YSDIG 181
L + E+L + N D++ + + RV E+D+ EQ Y IG
Sbjct: 303 -LTEEERLLKFSIGAKCNTDTFYFISST-----TRVNFTEIDKNSKEQDNQFKVTYDMIG 356
Query: 182 GLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 241
GL Q++ + E + LP+ E F + GI P+GVLLYGPPGTGKT++ARA A + +
Sbjct: 357 GLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVS 416
Query: 242 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 301
+ GP+++ F G+ +R FA A + P+IIFIDELDA+ KR ++ ++ V +
Sbjct: 417 VINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVAS 476
Query: 302 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
+L L++ + S + V+ ATNR LD AL R GR D++IE PN + R I+Q
Sbjct: 477 LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKL 536
Query: 362 SRKM-NVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
R++ ++ + +L+ S + GA K +C EAG+ ALRR
Sbjct: 537 LRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRR 578
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 518 (187.4 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 110/276 (39%), Positives = 163/276 (59%)
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
++ P D V+ D+ + E P + D K E+ Y DIGG KQ+ ++ E +
Sbjct: 171 EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG------YDDIGGCKKQLAQIREMIE 224
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
LP+ H F LG++PP+GVLLYGPPG+GKT +ARA A +T + F + GP+++ G+
Sbjct: 225 LPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGE 284
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
+R AF A++ +PAIIFIDE+D+I KR EK +R + +LL +DG S
Sbjct: 285 AEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSR 341
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
+ VIAATNR + +DPAL R GR DR+I+ P++ R I++IH++ M +SPDV EE
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
L+ +T F GA +C EA + +R ++ ED
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 459 (166.6 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 103/260 (39%), Positives = 150/260 (57%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P ++ DIGGLD+ L E ++ P+ H +KF G+ P +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A++ + F+ + GP+L+ M+ G+ VR+ F A+ AP ++F DELD+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
S G R M +LL ++DG ++ I ATNR ++LD ALLR GRLD+ I P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVT 408
P+ AR I+ RK V+ +V + L++ T F+GA +C A A+R AI
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD--AIDA 708
Query: 409 HEDFMDAIMEVQAKKKANLN 428
E + +E+ KK+ N
Sbjct: 709 EEMNKKSKLELSNKKENEQN 728
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 518 (187.4 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 110/276 (39%), Positives = 163/276 (59%)
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
++ P D V+ D+ + E P + D K E+ Y DIGG KQ+ ++ E +
Sbjct: 171 EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG------YDDIGGCKKQLAQIREMIE 224
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
LP+ H F LG++PP+GVLLYGPPG+GKT +ARA A +T + F + GP+++ G+
Sbjct: 225 LPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGE 284
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
+R AF A++ +PAIIFIDE+D+I KR EK +R + +LL +DG S
Sbjct: 285 AEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSR 341
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
+ VIAATNR + +DPAL R GR DR+I+ P++ R I++IH++ M +SPDV EE
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
L+ +T F GA +C EA + +R ++ ED
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 459 (166.6 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 103/260 (39%), Positives = 150/260 (57%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P ++ DIGGLD+ L E ++ P+ H +KF G+ P +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A++ + F+ + GP+L+ M+ G+ VR+ F A+ AP ++F DELD+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
S G R M +LL ++DG ++ I ATNR ++LD ALLR GRLD+ I P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVT 408
P+ AR I+ RK V+ +V + L++ T F+GA +C A A+R AI
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD--AIDA 708
Query: 409 HEDFMDAIMEVQAKKKANLN 428
E + +E+ KK+ N
Sbjct: 709 EEMNKKSKLELSNKKENEQN 728
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 106/252 (42%), Positives = 154/252 (61%)
Query: 170 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLA 229
+E+ ++ D+ G D++ QEL+E V + KF LG + PKGVLL GPPGTGKTLLA
Sbjct: 153 EEKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLA 211
Query: 230 RACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 289
+ACA + F ++G V+MF+G GA VRD F AK+ AP +IFIDE+DA+G +R
Sbjct: 212 KACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGA 271
Query: 290 SEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHP 349
G E ++T+ +LL ++DGFS+ I +IAATNR DILDPALLR GR DR+I P
Sbjct: 272 GLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRP 331
Query: 350 NEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTH 409
+ R ++++H+R + VN + ++ T F+GA + + EA ++A R+ +
Sbjct: 332 DVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDA 391
Query: 410 EDFMDAIMEVQA 421
D +A V A
Sbjct: 392 RDIDEATDRVIA 403
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 112/268 (41%), Positives = 163/268 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K + DE+ ++D+ G+D+ +EL E V + + K+ LG + PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F AK+ AP I+FIDE+D
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ +LL ++DGF+S I +IAATNR DILDPALLR GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R I P+ R I+++H + + DV+ + L+R T F GA + EA ++A R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 402 RGAAIVTHEDFMDAIMEVQA--KKKANL 427
R ++ E+ +AI V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 112/268 (41%), Positives = 163/268 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K + DE+ ++D+ G+D+ +EL E V + + K+ LG + PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F AK+ AP I+FIDE+D
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ +LL ++DGF+S I +IAATNR DILDPALLR GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R I P+ R I+++H + + DV+ + L+R T F GA + EA ++A R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 402 RGAAIVTHEDFMDAIMEVQA--KKKANL 427
R ++ E+ +AI V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 106/249 (42%), Positives = 156/249 (62%)
Query: 165 KAMEVDERPTE-QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
KA + +R + + D+ G+D+ +EL E V + +KF LG + PKG LL GPPGT
Sbjct: 143 KARLLSDRSNKVTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGT 201
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A + K F ++G V+MF+G GA VRD F K+ AP +IFIDE+DA+
Sbjct: 202 GKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAV 261
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
G R G+ E ++T+ +LL ++DGF + + +IAATNR D+LDPALLR GR DR+
Sbjct: 262 GRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQ 321
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
I P+ R +I+++H +K+ +P+V ++R T F+GA + E+ +IA RR
Sbjct: 322 ITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRN 381
Query: 404 AAIVTHEDF 412
+VT+EDF
Sbjct: 382 KKVVTNEDF 390
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 111/273 (40%), Positives = 165/273 (60%)
Query: 157 PAEYD-ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGV 215
P ++ ++ K EV E + D+ G D+ EL E V + + +K+ LG + PKG
Sbjct: 229 PMDFGRSKSKFQEVPETGVT-FGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 286
Query: 216 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 275
LL GPPGTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+
Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 346
Query: 276 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 335
FIDE+DA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD ALL
Sbjct: 347 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 406
Query: 336 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEA 395
R GR DR++ P+ R +I+++HSR + DV+YE+++R T F GA + + EA
Sbjct: 407 RPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEA 466
Query: 396 GMIALRRGAAIVTHEDFMDAIMEVQA---KKKA 425
++A RR ++ ++ DA+ + A KK A
Sbjct: 467 AILAARRELKEISKDEISDALERIIAGPEKKNA 499
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 500 (181.1 bits), Expect = 5.4e-49, Sum P(2) = 5.4e-49
Identities = 104/249 (41%), Positives = 155/249 (62%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG+ KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 492 (178.3 bits), Expect = 4.4e-48, Sum P(2) = 4.4e-48
Identities = 98/233 (42%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGLD +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG SS ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK +S DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
Score = 39 (18.8 bits), Expect = 5.4e-49, Sum P(2) = 5.4e-49
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G ES DD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKK 63
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 515 (186.3 bits), Expect = 6.5e-49, P = 6.5e-49
Identities = 125/367 (34%), Positives = 200/367 (54%)
Query: 61 QNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTST 120
+ KIR N K+ V NL + +VI + + ++ +D +G + +
Sbjct: 82 EEPKIRMN--KV-VRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAY 138
Query: 121 RQTYFLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPAEYDARVKAMEV------- 169
+ YFL ++ GDL G+ + ++ET PAEY E+
Sbjct: 139 LKPYFLEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPV 193
Query: 170 ---DERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
DE + Y D+GG+ KQ+ ++ E V LP+ H + F ++G++PPKG+LLYGPPG+G
Sbjct: 194 KREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTL+ARA A +T + F + GP+++ G+ +R AF A++ AP+IIFIDE+D+I
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
KR EK +R + +LL +DG S A + V+ ATNR + +DPAL R GR DR+I
Sbjct: 314 PKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA 404
+ P+E R +++IH++ M ++ DV+ E +S+ T + GA A+C EA + +R
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 405 AIVTHED 411
++ ED
Sbjct: 431 DVIDLED 437
Score = 472 (171.2 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 97/234 (41%), Positives = 142/234 (60%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P ++DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 289 DSEKA-GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
G R + +LL ++DG ++ + +I ATNR DI+D ALLR GRLD+ I P
Sbjct: 591 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 650
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I + RK ++ DV+ L++ T F+GA +C A A+R
Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIR 704
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 102/254 (40%), Positives = 157/254 (61%)
Query: 168 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
++D + + D+ G+D+ +EL E V + E+F +G + PKGVLL GPPGTGKTL
Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTL 220
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
LA+A A + F ++G + V+MF+G GA VRD F AKE AP +IFIDE+DA+G +R
Sbjct: 221 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR 280
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
G+ E ++T+ +LL ++DGF I +IAATNR D+LD AL+R GR DR++
Sbjct: 281 GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVD 340
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ R I+++H+R ++P+V+ + ++R T F+GA + EA ++ RR + +
Sbjct: 341 APDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
Query: 408 THEDFMDAIMEVQA 421
T + DA+ V A
Sbjct: 401 TLLEIDDAVDRVVA 414
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 110/273 (40%), Positives = 166/273 (60%)
Query: 157 PAEYD-ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGV 215
P ++ ++ K EV E ++D+ G D+ EL E V + + +K+ LG + PKG
Sbjct: 241 PMDFGRSKSKFQEVPETGVS-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 298
Query: 216 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 275
LL GPPGTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+
Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 358
Query: 276 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 335
FIDE+DA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD ALL
Sbjct: 359 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 418
Query: 336 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEA 395
R GR DR++ P+ R +I+Q+HSR + DV++++++R T F GA + + EA
Sbjct: 419 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEA 478
Query: 396 GMIALRRGAAIVTHEDFMDAIMEVQA---KKKA 425
++A RR ++ ++ DA+ + A KK A
Sbjct: 479 AILAARRELKEISKDEISDALERIIAGPEKKNA 511
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 489 (177.2 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 104/269 (38%), Positives = 166/269 (61%)
Query: 165 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
K + E+P ++SD+ G+++ +E+ E V + + E+++ LG + PKG+LL GPPGTG
Sbjct: 165 KKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDF-LKYPERYIKLGAKIPKGLLLVGPPGTG 223
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTLLA+A A + F ++G ++MF+G GA VRD F AK++APAI+FIDE+DAIG
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIG 283
Query: 285 TKRFDSEK-AGDREVQRTMLELLNQLDGFSS-TADIKVIAATNRVDILDPALLRSGRLDR 342
R S G+ E ++T+ +LL ++DGF + ++ + V+AATNR ++LD ALLR GR DR
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
++ P+ + R I+++H + + +SP V E+++R T GA + EA ++A R
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRD 403
Query: 403 GAAIVTHEDFMDAIMEVQA---KKKANLN 428
V D ++A+ A KK +N
Sbjct: 404 SKKYVEQNDLVEAVERAIAGLEKKSRRIN 432
Score = 37 (18.1 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 73 KVNKNLPY 80
+VNKN+PY
Sbjct: 55 EVNKNVPY 62
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/234 (45%), Positives = 150/234 (64%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G++ EL E +V + +KF +G + PKGVLL GPPGTGKTLLARA A +
Sbjct: 174 FDDVAGMENPKMELKE-IVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEA 232
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
TFL ++ Q ++MF+G GA VRD FA AK+ AP+IIFIDELDA+G R G
Sbjct: 233 DVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHD 292
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E ++T+ +LL+++DGF S ++ V+AATNR D+LDPALLR GR DR + P+ R +
Sbjct: 293 EREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREK 352
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHE 410
I+ +H+RK+ + DV+ ++R T GA + + EA ++A R AA VT E
Sbjct: 353 ILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTME 406
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 105/252 (41%), Positives = 152/252 (60%)
Query: 170 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLA 229
DE+ ++ D+ G D++ QEL+E V + KF +G + PKGVLL GPPGTGKTLLA
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLA 212
Query: 230 RACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 289
RA A + F ++G V+MF+G GA VRD F AK+ AP IIFIDE+DA+G +R
Sbjct: 213 RAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA 272
Query: 290 SEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHP 349
G E ++T+ +LL ++DGF + I +IAATNR DILDPALLR GR DR+I P
Sbjct: 273 GLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRP 332
Query: 350 NEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTH 409
+ R ++++H+R + ++N ++ T F+GA + + EA ++A R+ +
Sbjct: 333 DVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDM 392
Query: 410 EDFMDAIMEVQA 421
D +A V A
Sbjct: 393 SDIDEATDRVIA 404
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 502 (181.8 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 105/249 (42%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M +S DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 482 (174.7 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 96/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 502 (181.8 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 105/249 (42%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDA 308
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG A + V+AATNR + +DPAL R GR DR
Sbjct: 309 IAPKR---EKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 365
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+++ P+ R I+QIH++ M +S DV+ E+++ T GA A+C EA + A+R+
Sbjct: 366 EVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 426 KMDLIDLED 434
Score = 479 (173.7 bits), Expect = 6.0e-45, P = 6.0e-45
Identities = 96/233 (41%), Positives = 147/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIR 700
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 98/176 (55%), Positives = 126/176 (71%)
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
K+ P V + DSY + + LP + D V M V++ P Y IGGLDKQI+E+ E +
Sbjct: 88 KVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 147
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
LP+ H E F LGI PKGVLLYGPPGTGKTLLARA A T TF++++G +LVQ FIG+
Sbjct: 148 LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGE 207
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
GA++VR+ F +A+E AP+IIF+DE+D+IG+ R + GD EVQRTMLELLNQLDG
Sbjct: 208 GARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 263
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 486 (176.1 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 101/250 (40%), Positives = 153/250 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AF ++ APAIIFIDELDA
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDA 308
Query: 283 IGTKR-FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
I + F S + +R + +LL +DG A + V+AATNR + +DPAL R GR D
Sbjct: 309 IASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 368
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+R
Sbjct: 369 REVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIR 428
Query: 402 RGAAIVTHED 411
+ ++ ED
Sbjct: 429 KKMDLIDLED 438
Score = 483 (175.1 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 96/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 472 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 531
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 591
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 704
Score = 39 (18.8 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S DD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKK 63
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 496 (179.7 bits), Expect = 3.1e-47, P = 3.1e-47
Identities = 106/260 (40%), Positives = 155/260 (59%)
Query: 171 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLAR 230
E P ++DIGG ++ E+ +AV+ P H E F GI PP G+LLYGPPG KTL+AR
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 231 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 290
A A++ K FL + GP+L ++GD K +RD F+ A++ AP I+F DE+DA+G+ R
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSE 571
Query: 291 EKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPN 350
+ +G + R + +LL +LDG ++ + ++AATNR D LD ALLR GRLDR I P
Sbjct: 572 KSSGVSD--RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPC 629
Query: 351 EEARARIMQIHSRKMNVSPDVN-YEELSRSTDDFNGAQCKAVCVEAGMIALRRG--AAIV 407
E R I+++ ++KM V ++L T ++GA+ AVC A M A+R A IV
Sbjct: 630 EVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESIDATIV 689
Query: 408 THEDFMDAIMEVQAKKKANL 427
F A+ V ++ +A L
Sbjct: 690 QWTHFEQALAAVVSRTEAYL 709
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 483 (175.1 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 96/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 466 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 525
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 585
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 586 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 698
Score = 410 (149.4 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 91/251 (36%), Positives = 141/251 (56%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K + +E E Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPG
Sbjct: 189 IKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPG 248
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKE--KAPAIIFIDEL 280
TGKTL+ARA A +T + F + GP+++ G+G R + A K I D+
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDC 308
Query: 281 DAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRL 340
F S + +R + +LL +DG A + V+AATNR + +DPAL R GR
Sbjct: 309 -------FPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF 361
Query: 341 DRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIAL 400
DR+++ P+ R I+QIH++ M ++ DV+ E+++ T GA A+C EA + A+
Sbjct: 362 DREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 421
Query: 401 RRGAAIVTHED 411
R+ ++ ED
Sbjct: 422 RKKMDLIDLED 432
Score = 39 (18.8 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 17 GEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNK 76
G +S DD+ N RL+ +E + V+ +S + + R +T +K K
Sbjct: 4 GSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKK 63
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 498 (180.4 bits), Expect = 5.9e-47, P = 5.9e-47
Identities = 117/309 (37%), Positives = 178/309 (57%)
Query: 109 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM- 167
RKG V++ RQ F +VD E P + V +D+ + E P + M
Sbjct: 157 RKGDHFVVRGGMRQVEFK----VVDVE---PEEYAVVAQDTIIHWEGEPINREDEENNMN 209
Query: 168 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
EV Y DIGG KQ+ ++ E V LP+ H + F +GI+PP+GVL+YGPPGTGKTL
Sbjct: 210 EVG------YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTL 263
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
+ARA A +T + F + GP+++ G+ +R AF A++ APAIIFIDE+D+I KR
Sbjct: 264 MARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR 323
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
+K +R + +LL +DG + +++ VIAATNR + +DPAL R GR DR+++
Sbjct: 324 ---DKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 380
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ R +++IH++ M ++ DV+ E L+ T + GA ++C EA M +R ++
Sbjct: 381 IPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLI 440
Query: 408 T-HEDFMDA 415
ED +DA
Sbjct: 441 DLDEDEIDA 449
Score = 459 (166.6 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 104/291 (35%), Positives = 162/291 (55%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+DAE L D +GV D++ L + ++ V E + D+GGLD+ +EL
Sbjct: 447 IDAEVL---DSLGVTMDNFRF--ALGNSNPSALRETVV-ESVNVTWDDVGGLDEIKEELK 500
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V P+ H +++ G+ P KGVL YGPPGTGKTLLA+A A + + F+ + GP+L+ M
Sbjct: 501 ETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 560
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ +RD F A+ AP ++F+DELD+I R S R + +LL ++DG
Sbjct: 561 WYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDG 620
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
++ ++ VI ATNR D +DPA+LR GRLD+ I P P+E AR I+ RK + P +
Sbjct: 621 MNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGL 680
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQAK 422
++++T F+GA + A A++ +I H +A EV+ +
Sbjct: 681 ELTAIAKATQGFSGADLLYIVQRAAKYAIKD--SIEAHRQH-EAEKEVKVE 728
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 103/235 (43%), Positives = 147/235 (62%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
Y DIGG KQ+ ++ E V LP+ H F +G++PP+G+LLYGPPGTGKTL+ARA A +T
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ F + GP+++ G+ +R AF A++ APAIIFIDELDAI KR EK
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTHGE 321
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
+R + +LL +DG A + V+AATNR + +D AL R GR DR+I+ P+ R
Sbjct: 322 VERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLE 381
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
I+QIH++ M +S DV+ E++S T GA A+C EA + A+R+ ++ ED
Sbjct: 382 ILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLED 436
Score = 469 (170.2 bits), Expect = 7.5e-44, P = 7.5e-44
Identities = 98/235 (41%), Positives = 147/235 (62%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGLD+ +EL E V P+ + +KF+ G+ P +GVL YGPPG GKTLL
Sbjct: 470 VVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VRD F A++ AP I+F DELD+I R
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 289 DSEKAGDR--EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEF 346
AGD R + ++L ++DG ++ ++ +I ATNR DI+DPA+LR GRLD+ I
Sbjct: 590 GG--AGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 647
Query: 347 PHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P P+ +R I++ + RK V+ DV+ LS+ T+ F+GA +C A +A+R
Sbjct: 648 PLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIR 702
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 497 (180.0 bits), Expect = 7.0e-47, P = 7.0e-47
Identities = 100/240 (41%), Positives = 153/240 (63%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
Y DIGG KQ+ ++ E V LP+ H + F ++GI+PP+GVLLYGPPGTGKTL+ARA A +T
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ F + GP+++ G+ +R AF A++ +PAIIFIDE+D+I KR EK
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTNGE 337
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
+R + +LL +DG + +++ V+AATNR + +DPAL R GR DR+++ P+ R
Sbjct: 338 VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 397
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVT-HEDFMDA 415
I+QIH++ M + DV+ E+++ T + G+ A+C EA M +R ++ ED +DA
Sbjct: 398 ILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDA 457
Score = 480 (174.0 bits), Expect = 5.1e-45, P = 5.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+DAE L D +GV +++ L + ++ + V E P ++ DIGGLD+ Q+L
Sbjct: 455 IDAEVL---DSLGVTMENFRF--ALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLR 509
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V P+ H EKF+ G+ P +GVL YGPPGTGKT+LA+A A + + F+ + GP+L+ M
Sbjct: 510 EQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSM 569
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ +RD F A+ AP I+F+DELD+I R S R + +LL ++DG
Sbjct: 570 WFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDG 629
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
+S ++ VI ATNR + LDPAL R GRLD I P P+E R I++ RK VS DV
Sbjct: 630 MTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDV 689
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
+ + ++ T F+GA + A IA++
Sbjct: 690 DLQYIANKTHGFSGADLGFITQRAVKIAIK 719
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 482 (174.7 bits), Expect = 7.5e-47, Sum P(2) = 7.5e-47
Identities = 98/254 (38%), Positives = 155/254 (61%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ DIGGLD +EL +A+ P +KE F G+ PPKG++LYGPPG KT L +A A+ +
Sbjct: 569 WDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSS 628
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGD 295
K +FL L+G + ++GD + +RD F A++ P+I+F DE+DAI +KR +GD
Sbjct: 629 KLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGD 688
Query: 296 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARA 355
R + LN++DG + VI ATNR+D++D ALLR GR D+ +E P++ +R
Sbjct: 689 NAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRL 748
Query: 356 RIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGA--AIVTHEDFM 413
+I++I ++ + +S +VN E+S T+ F+GA + +C EA +LRR V DF+
Sbjct: 749 KILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLNGFVEMYDFL 808
Query: 414 DAIMEVQAKKKANL 427
+ + ++ + K NL
Sbjct: 809 NCLSKINNQSK-NL 821
Score = 335 (123.0 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
Identities = 80/232 (34%), Positives = 132/232 (56%)
Query: 180 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKST 239
IGGL++QI+ L E ++ P+ + F L I PPKG+LL GPPGTGKT L R
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 240 FLKLAGPQLVQMFIGDGAKLVRDAF------ALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
+ + ++ +IG+ + +R+ F ++AK +P ++FIDE+D I R K+
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR---SKS 405
Query: 294 GDREVQRTMLELLNQLDGFSST-ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
E R + + L LDG + ++ +IAATNR + +D AL R GRLDR+IE P PN++
Sbjct: 406 TQNE-SRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQ 464
Query: 353 ARARIMQIHSRKMNVSPDVN--YEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
R I++++ K+ +SP + ++++ T + GA + +C ++ IA +
Sbjct: 465 QRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSK 516
Score = 39 (18.8 bits), Expect = 7.5e-47, Sum P(2) = 7.5e-47
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 33 INSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPY 80
I S ++L+ N+ +I E + Q Q ++ +E + K NK++ Y
Sbjct: 110 IQSNSKLILNQ-QINDEE----QEQEQEQEQEQQEQEQNKKQNKSIKY 152
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 498 (180.4 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 109/274 (39%), Positives = 162/274 (59%)
Query: 161 DARVKAM-EVD-ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
D R AM EV + P +SDIGGL+ +L +AV P+ H + F +GIQPPKGVLLY
Sbjct: 608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLY 667
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F A+ AP+IIF D
Sbjct: 668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 727
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
ELDA+ +R S AG+ R + +LL ++DG ++ V+AATNR D +D AL+R G
Sbjct: 728 ELDALAVERGSSSGAGN-VADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPG 786
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMI 398
R+DR I P P+ R I+ + M +S +V+ +EL TD ++GA+ AVC EA ++
Sbjct: 787 RIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALL 846
Query: 399 ALRRG--AAIVTHEDFMDAIMEVQAKKKANLNYY 430
AL A + F A+ V + +L +
Sbjct: 847 ALEENIKADCIMKRHFTQALSIVTPRIPESLRRF 880
Score = 412 (150.1 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 107/319 (33%), Positives = 171/319 (53%)
Query: 88 LLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDL-VGVN 146
LLDV + DG+ + L+ KC+ S+++ PV + + LKP N
Sbjct: 267 LLDVT--QSPRDGSGLGLEESTGLKCSF--DSSKEGNTQPVS---EEKLLKPASAGTKSN 319
Query: 147 KDSYLILETLPAEYDARV--KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKF 204
D++ + + ++ + E D + Y IGGL+ Q++ + E + LP+ E F
Sbjct: 320 TDTFYFISSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELF 379
Query: 205 VNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAF 264
+ GI P+G+LLYGPPGTGKT++ARA A + + + GP+++ F G+ +R F
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 265 ALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAAT 324
A A + P+IIFIDELDA+ KR ++ ++ V ++L L++ + S + V+ AT
Sbjct: 440 AEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGAT 499
Query: 325 NRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM-NVSPDVNYEELSRSTDDF 383
NR LD AL R GR D++IE PN + R I+Q R++ ++ L+ + +
Sbjct: 500 NRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGY 559
Query: 384 NGAQCKAVCVEAGMIALRR 402
GA KA+C EAG+ ALRR
Sbjct: 560 VGADLKALCNEAGLHALRR 578
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 99/245 (40%), Positives = 150/245 (61%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G+D+ Q+ +E V + E+F +G + PKGVLL GPPGTGKTLLA+A A +
Sbjct: 219 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+G +R G+
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E ++T+ +LL ++DGF + V+AATNR DILD ALLR GR DR++ P+ + R
Sbjct: 338 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 397
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAI 416
I+++HS V+ E ++ T F+GA + EA ++A RRG ++ ++ D+I
Sbjct: 398 ILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSI 457
Query: 417 MEVQA 421
+ A
Sbjct: 458 DRIVA 462
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 495 (179.3 bits), Expect = 1.2e-46, P = 1.2e-46
Identities = 109/304 (35%), Positives = 177/304 (58%)
Query: 109 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM- 167
RKG ++ RQ F V ++ P ++ V +D+ + E P + ++
Sbjct: 158 RKGDLFTVRGGMRQVEFKVV-------EVDPEEIAIVAQDTIIHCEGEPINREDEENSLN 210
Query: 168 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
EV Y DIGG KQ+ ++ E V LP+ H + F ++GI+PPKG+L+YGPPGTGKT+
Sbjct: 211 EVG------YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
+ARA A +T + F + GP+++ G+ +R AF A++ +P+IIFIDE+D+I KR
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
+K +R + +LL +DG + +++ VIAATNR + +DPAL R GR DR+++
Sbjct: 325 ---DKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ E R I++IH++ M ++ DV+ E ++ T F GA ++C EA M +R ++
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Query: 408 THED 411
E+
Sbjct: 442 DLEE 445
Score = 451 (163.8 bits), Expect = 7.7e-42, P = 7.7e-42
Identities = 98/270 (36%), Positives = 151/270 (55%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+D E L +GV +D++ L + ++ V E + DIGGLD EL
Sbjct: 448 IDTEVLNS---LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELK 501
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V P+ H +++ G+ P KGVL +GPPGTGKTLLA+A A + + F+ + GP+L+ M
Sbjct: 502 ETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 561
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ +RD F A+ AP ++F+DELD+I R S R + +LL ++DG
Sbjct: 562 WYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDG 621
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
++ ++ VI ATNR D +DPALLR GRLD+ I P P+E AR I+Q R + P +
Sbjct: 622 MNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGL 681
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
+ E+++ T F+GA + + A++
Sbjct: 682 DLNEIAKITHGFSGADLSYIVQRSAKFAIK 711
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 495 (179.3 bits), Expect = 1.2e-46, P = 1.2e-46
Identities = 109/304 (35%), Positives = 177/304 (58%)
Query: 109 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM- 167
RKG ++ RQ F V ++ P ++ V +D+ + E P + ++
Sbjct: 158 RKGDLFTVRGGMRQVEFKVV-------EVDPEEIAIVAQDTIIHCEGEPINREDEENSLN 210
Query: 168 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
EV Y DIGG KQ+ ++ E V LP+ H + F ++GI+PPKG+L+YGPPGTGKT+
Sbjct: 211 EVG------YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
+ARA A +T + F + GP+++ G+ +R AF A++ +P+IIFIDE+D+I KR
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
+K +R + +LL +DG + +++ VIAATNR + +DPAL R GR DR+++
Sbjct: 325 ---DKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ E R I++IH++ M ++ DV+ E ++ T F GA ++C EA M +R ++
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Query: 408 THED 411
E+
Sbjct: 442 DLEE 445
Score = 451 (163.8 bits), Expect = 7.7e-42, P = 7.7e-42
Identities = 98/270 (36%), Positives = 151/270 (55%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+D E L +GV +D++ L + ++ V E + DIGGLD EL
Sbjct: 448 IDTEVLNS---LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELK 501
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V P+ H +++ G+ P KGVL +GPPGTGKTLLA+A A + + F+ + GP+L+ M
Sbjct: 502 ETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 561
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ +RD F A+ AP ++F+DELD+I R S R + +LL ++DG
Sbjct: 562 WYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDG 621
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
++ ++ VI ATNR D +DPALLR GRLD+ I P P+E AR I+Q R + P +
Sbjct: 622 MNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGL 681
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
+ E+++ T F+GA + + A++
Sbjct: 682 DLNEIAKITHGFSGADLSYIVQRSAKFAIK 711
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 495 (179.3 bits), Expect = 1.2e-46, P = 1.2e-46
Identities = 108/257 (42%), Positives = 160/257 (62%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G ++ E++E V + + +++++LG + PKG +L GPPGTGKTLLA+A A +
Sbjct: 327 FKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 385
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F+ ++G + ++MF+G G VRD FA+A++ AP I+FIDE+DA+G KR G
Sbjct: 386 NVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHS 445
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E + T+ +LL ++DGF++T ++ V+AATNRVDILD AL+R GR DR+I P P+ + RA
Sbjct: 446 EQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRAS 505
Query: 357 IMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
I ++H + S D N ELSR T F GA VC EA +IA R + + F
Sbjct: 506 IFKVHLGNLKTSLDKN--ELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHF 563
Query: 413 MDAIMEVQA--KKKANL 427
AI V A +KK N+
Sbjct: 564 EQAIERVIAGMEKKTNV 580
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 494 (179.0 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 112/309 (36%), Positives = 183/309 (59%)
Query: 109 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM- 167
RKG V++ S RQ F +VD + P + V++D+ + E P + ++
Sbjct: 167 RKGDLFVVRGSMRQVEFK----VVD---VAPDEFGIVSQDTIIHWEGEPINREDEESSLA 219
Query: 168 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
EV Y DIGG +Q+ ++ E V LP+ H + F ++GI+PP+G+L+YGPPGTGKTL
Sbjct: 220 EVG------YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 273
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
+ARA A +T + F + GP+++ G+ +R AF A++ +PAIIFIDE+D+I KR
Sbjct: 274 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR 333
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
EK +R + +LL +DG + +++ V+AATNR + +DPAL R GR DR+++
Sbjct: 334 ---EKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVG 390
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ R I++IH++ M ++ DV+ E+++ T + G+ ++C EA M +R ++
Sbjct: 391 IPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450
Query: 408 T-HEDFMDA 415
ED +DA
Sbjct: 451 DLDEDEIDA 459
Score = 487 (176.5 bits), Expect = 8.4e-46, P = 8.4e-46
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+DAE L D +GV D++ L + + ++ V E P ++ DIGGL++ +EL
Sbjct: 457 IDAEVL---DSLGVTMDNFRF--ALGSSNPSALRETVV-EVPNVRWEDIGGLEEVKRELR 510
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V +P+ + EKF+ G+ P KGVL +GPPGTGKTLLA+A A + + F+ + GP+L+ M
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSM 570
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV-QRTMLELLNQLD 310
+ G+ VRD F A+ AP ++F+DELD+I R S AGD R + +LL ++D
Sbjct: 571 WFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGAS--AGDSGGGDRVVNQLLTEMD 628
Query: 311 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 370
G +S ++ VI ATNR D +DPAL+R GRLD+ I P P+EEAR I+Q R V+ D
Sbjct: 629 GVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAED 688
Query: 371 VNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
V+ ++++T F+GA + V A +A++
Sbjct: 689 VDLRAVAKATHGFSGADLEFVVQRAVKLAIK 719
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 487 (176.5 bits), Expect = 1.9e-46, P = 1.9e-46
Identities = 99/265 (37%), Positives = 156/265 (58%)
Query: 157 PAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVL 216
P ++ +++ + D+ G+D+ Q+ +E V + E+F +G + PKGVL
Sbjct: 206 PLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVL 264
Query: 217 LYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIF 276
L GPPGTGKTLLA+A A + F ++G + V+MF+G GA VRD F AKE AP I+F
Sbjct: 265 LIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 324
Query: 277 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLR 336
+DE+DA+G +R G+ E ++T+ +LL ++DGF + V+AATNR DILD ALLR
Sbjct: 325 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLR 384
Query: 337 SGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAG 396
GR DR++ P+ + R I+++H+ DV+ E ++ T F+GA + EA
Sbjct: 385 PGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAA 444
Query: 397 MIALRRGAAIVTHEDFMDAIMEVQA 421
++A RR ++ ++ D+I + A
Sbjct: 445 ILAGRRARTSISSKEIDDSIDRIVA 469
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 491 (177.9 bits), Expect = 1.9e-46, P = 1.9e-46
Identities = 102/258 (39%), Positives = 155/258 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K + D P ++D+ G+D+ ++EL E + + ++ LG + PKGVLLYGPP
Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPP 205
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLARA A + F ++G V+MF+G GA VRD F AK+ +P IIF+DE+D
Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ +LL ++DGF A + +IAATNR DILDPALLR GR D
Sbjct: 266 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFD 325
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R+I +P+ R ++++HS+ ++ D + + L++ T GA V EA ++ R
Sbjct: 326 RQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTAR 385
Query: 402 RGAAIVTHEDFMDAIMEV 419
++T +A+ V
Sbjct: 386 ENGTVITGPALEEAVDRV 403
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 102/254 (40%), Positives = 156/254 (61%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ + + D+ T ++D+ G D+ +E+ E V + +F LG + PKGVL+ GPP
Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPP 194
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + K F ++G V+MF+G GA VRD F AK+ AP IIFIDE+D
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ ++L ++DGF I VIAATNR D+LDPALLR GR D
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+++H R++ ++PD++ ++R T F+GA + EA + A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 402 RGAAIVTHEDFMDA 415
+V+ +F A
Sbjct: 375 GNKRVVSMVEFEKA 388
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 490 (177.5 bits), Expect = 3.4e-46, P = 3.4e-46
Identities = 128/416 (30%), Positives = 218/416 (52%)
Query: 18 EESLGDD--ILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEKIKVN 75
EE++ DD ++ ++ + ++ + + + ++K + R + + + I + KI++N
Sbjct: 28 EEAINDDNSVVTLNPETMD-QLQFFRGDTLLIKGKKRRDTVCIVLSDPTI--DPSKIRMN 84
Query: 76 K----NLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGL 131
K NL + ++I + + V+ +D +G + + YFL
Sbjct: 85 KVVRNNLRVRLGDMISVHQCSDVKYGKRIHVLPIDDTIEGLSGNLFDLYLKPYFLEAY-- 142
Query: 132 VDAEKLKPGDLV----GVNKDSYLILETLPAEY-----------DARVKAMEVDERPTEQ 176
++ GDL G+ + ++ET P EY + E ++R E
Sbjct: 143 ---RPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIHCEGEAVKREDEDRLDEV 199
Query: 177 -YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQ 235
Y DIGG+ KQ+ ++ E V LP+ H + F N+G++PPKG+LLYGPPG GKT++ARA A +
Sbjct: 200 GYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANE 259
Query: 236 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 295
T + F + GP+++ G+ +R AF A++ AP+IIFIDE+D+I KR EK
Sbjct: 260 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTQG 316
Query: 296 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARA 355
+R + +LL +DG S A + V+ ATNR + +DPAL R GR DR+I+ P+ R
Sbjct: 317 EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRL 376
Query: 356 RIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
IM+IH++ M + V+ E ++ T + GA A+C E+ + +R ++ ED
Sbjct: 377 EIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLED 432
Score = 479 (173.7 bits), Expect = 5.5e-45, P = 5.5e-45
Identities = 105/263 (39%), Positives = 157/263 (59%)
Query: 143 VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKE 202
+ V +D + TL R +EV PT + DIGGL+ +EL E V P+ H E
Sbjct: 443 MSVTQDHFRTALTLSNPSALRETVVEV---PTTTWEDIGGLEGVKRELRETVQYPVEHPE 499
Query: 203 KFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRD 262
KF G+QP KGVL YGPPG GKTLLA+A A + ++ F+ + GP+L+ M+ G+ VR+
Sbjct: 500 KFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 559
Query: 263 AFALAKEKAPAIIFIDELDAI----GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADI 318
F A++ AP ++F DELD+I G+ + D+ AGDR + ++L ++DG ++ ++
Sbjct: 560 LFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVIN----QILTEMDGMNAKKNV 615
Query: 319 KVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSR 378
+I ATNR DI+DPA+LR GRLD+ I P P+ +R I++ K V+ DV+ E L +
Sbjct: 616 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQ 675
Query: 379 STDDFNGAQCKAVCVEAGMIALR 401
T F+GA +C A +A+R
Sbjct: 676 KTQGFSGADLTEICQRACKLAIR 698
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 96/233 (41%), Positives = 148/233 (63%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 200 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 259
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I R
Sbjct: 260 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 319
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
+ G R + ++L ++DG S+ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 320 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E++R I++ + RK V+ DV+ + L++ T+ F+GA +C A +A+R
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 432
Score = 307 (113.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/168 (39%), Positives = 100/168 (59%)
Query: 244 AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML 303
+GP+++ G+ +R AF A++ APAIIFIDELDAI KR EK +R +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTHGEVERRIVS 58
Query: 304 ELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 363
+LL +DG A + V+AATNR + +DPAL R GR DR+++ P+ R I+QIH++
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 364 KMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHED 411
M ++ DV+ E++ T GA A+C EA + A+R+ ++ ED
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED 166
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 474 (171.9 bits), Expect = 5.7e-46, Sum P(2) = 5.7e-46
Identities = 104/245 (42%), Positives = 157/245 (64%)
Query: 171 ERPTEQYSDIGGLDK---QIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTL 227
E T ++SD+ G D+ ++QEL+E ++ P E+F +LG + PKGVLL GPPGTGKTL
Sbjct: 308 EHQTVRFSDVHGCDEAKDELQELVEFLLNP----ERFSSLGGKLPKGVLLVGPPGTGKTL 363
Query: 228 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 287
LARA A + F ++G + ++++G GAK VR+ F A+ K+PAIIFIDELDAIG KR
Sbjct: 364 LARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKR 423
Query: 288 FDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
+ + A V++T+ +LL +LDGFS + + ++AATN ++LD AL R GR DRK+
Sbjct: 424 NERDAA---YVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVD 480
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIV 407
P+ R I++ H + + +S DV+ ++R T F+GA + + +A + A R + V
Sbjct: 481 LPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKV 540
Query: 408 THEDF 412
T +DF
Sbjct: 541 TPKDF 545
Score = 37 (18.1 bits), Expect = 5.7e-46, Sum P(2) = 5.7e-46
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 55 SHELQAQNEKIREN 68
SH L AQ EK N
Sbjct: 136 SHSLLAQKEKTANN 149
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 489 (177.2 bits), Expect = 7.3e-46, P = 7.3e-46
Identities = 101/243 (41%), Positives = 158/243 (65%)
Query: 176 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQ 235
++ +I G+D+ EL+E V + ++EK+ +G + PKGVLL GPPG+GKT+LARA A +
Sbjct: 147 RFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 236 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK--A 293
++ +GP+ +++++G GAK +R FA A+ AP+I+FIDE+DAIG KR A
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G RE +T+ +LL ++DGFS+T I VI ATNR+D LD ALLR GR DR + P P+
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 354 RARIMQIHSRKMNVSPDV-NYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
R +I++I+ +K+ + + E+++R T F+GA + V EA ++A R ++VT +
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 413 MDA 415
+A
Sbjct: 386 YEA 388
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 489 (177.2 bits), Expect = 7.3e-46, P = 7.3e-46
Identities = 101/243 (41%), Positives = 158/243 (65%)
Query: 176 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQ 235
++ +I G+D+ EL+E V + ++EK+ +G + PKGVLL GPPG+GKT+LARA A +
Sbjct: 147 RFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 236 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK--A 293
++ +GP+ +++++G GAK +R FA A+ AP+I+FIDE+DAIG KR A
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 294 GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 353
G RE +T+ +LL ++DGFS+T I VI ATNR+D LD ALLR GR DR + P P+
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 354 RARIMQIHSRKMNVSPDV-NYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
R +I++I+ +K+ + + E+++R T F+GA + V EA ++A R ++VT +
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 413 MDA 415
+A
Sbjct: 386 YEA 388
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 105/251 (41%), Positives = 152/251 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ K M D+ T ++D+ G D+ +E+ E V + KF LG + P GVL+ GPP
Sbjct: 142 SKAKLMSEDQIKTT-FADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPP 199
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A ++K F ++G V+MF+G GA VRD F AK+ AP IIFIDE+D
Sbjct: 200 GTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEID 259
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ ++L ++DGF I VIAATNR D+LD ALLR GR D
Sbjct: 260 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFD 319
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+++H RK+ +S DV ++R T F+GA + EA + A R
Sbjct: 320 RQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAAR 379
Query: 402 RGAAIVTHEDF 412
+V E+F
Sbjct: 380 GNRRVVGMEEF 390
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 105/266 (39%), Positives = 162/266 (60%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQ-PPKGVLL 217
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + P KG +L
Sbjct: 84 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKKGAIL 138
Query: 218 YGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFI 277
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FI
Sbjct: 139 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 198
Query: 278 DELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRS 337
DE+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPALLR
Sbjct: 199 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRP 258
Query: 338 GRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCV 393
GR DR+I P+ + RA I ++H R + + + E+L+R T F+GA VC
Sbjct: 259 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCN 318
Query: 394 EAGMIALRRGAAIVTHEDFMDAIMEV 419
EA +IA R + + + F AI V
Sbjct: 319 EAALIAARHLSDSINQKHFEQAIERV 344
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 485 (175.8 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 98/255 (38%), Positives = 156/255 (61%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
Y DIGG KQ+ ++ E V LP+ H + F ++GI+PP+G+L+YGPPGTGKTL+ARA A +T
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
+ F + GP+++ G+ +R AF A++ +PAIIFIDE+D+I KR EK
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTNGE 340
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
+R + +LL +DG + +++ V+AATNR + +DPAL R GR DR+++ P+ R
Sbjct: 341 VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 400
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVT-HEDFMDA 415
I+ IH++ M + DV+ E ++ T + G+ ++C EA M +R ++ ED +DA
Sbjct: 401 ILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDA 460
Query: 416 -IMEVQAKKKANLNY 429
+++ N Y
Sbjct: 461 EVLDSLGVTMENFRY 475
Score = 469 (170.2 bits), Expect = 8.3e-44, P = 8.3e-44
Identities = 102/270 (37%), Positives = 159/270 (58%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+DAE L D +GV +++ L + ++ + V E P ++ DIGGL++ +ELI
Sbjct: 458 IDAEVL---DSLGVTMENFRY--ALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELI 512
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E+V P+ H EKF G+ P +GVL YGPPGTGKT+LA+A A + + F+ + GP+L+ M
Sbjct: 513 ESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSM 572
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ +RD F A+ AP ++F+DELD+I R S R + +LL ++DG
Sbjct: 573 WFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDG 632
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
+S ++ VI ATNR + LD AL+R GRLD + P P++ +R I++ RK V+ DV
Sbjct: 633 MTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDV 692
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
+ E ++ T F+GA V A +A++
Sbjct: 693 DIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 103/265 (38%), Positives = 161/265 (60%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 137 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 191
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ + G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 192 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 251
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPAL+R G
Sbjct: 252 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 311
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + ++ + L+R T F+GA VC E
Sbjct: 312 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 371
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 372 AALIAARHLSDAINQKHFEQAIERV 396
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 484 (175.4 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPAL+R G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + + E+L+R T F+GA VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 482 (174.7 bits), Expect = 2.0e-45, P = 2.0e-45
Identities = 127/360 (35%), Positives = 197/360 (54%)
Query: 68 NTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLP 127
NT K+ + + Y ++N ++ D + + + DL K I S + YF P
Sbjct: 198 NTYKLN-DDGVTYSITNSFKIGDKKVFEEQVEKVQSDLGIP---KSQFIPISYHE-YFDP 252
Query: 128 VIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVD-----ERPTE--QYSDI 180
+ L+ ++ P ++G YLI T + ++ + E+ T ++SD+
Sbjct: 253 RVALI---QVIPYAIIG-----YLIFRTFRSIKSNKMFSQGKSTANKFEKSTSTVKFSDV 304
Query: 181 GGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTF 240
GL + E IE V + + +KF ++G + P+G +L GPPGTGKTL+A+A A + F
Sbjct: 305 AGLGEAKVE-IEEFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPF 363
Query: 241 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR-EVQ 299
+G V+MF+G G VRD F A++ AP I+FIDE+DA+G R +G E +
Sbjct: 364 YSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERE 423
Query: 300 RTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 359
T+ +LL ++DGF ++ V+AATNR DILD ALLR GR DR+I +P+ ++R I +
Sbjct: 424 NTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFR 483
Query: 360 IHSRKMNVSPDVNY-EELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIME 418
+H + + +NY E LS+ T F+GA VC EA +IA RR A I+T E F DA ++
Sbjct: 484 VHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHF-DAAVD 542
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 483 (175.1 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 347
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPALLR G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 467
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + + ++L+R T F+GA VC E
Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNE 527
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 528 AALIAARHLSDSINQKHFEQAIERV 552
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 483 (175.1 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPALLR G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + + ++L+R T F+GA VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 483 (175.1 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPALLR G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + + ++L+R T F+GA VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 483 (175.1 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ ++G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPAL+R G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + + E+L+R T F+GA VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 484 (175.4 bits), Expect = 2.3e-45, P = 2.3e-45
Identities = 105/261 (40%), Positives = 163/261 (62%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
+R K + +E+ + D G + I+ ++ +V + + E+F N GI PKGVLL+GPP
Sbjct: 300 SRAKFISAEEKTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 358
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + F G V+MF+G A V+D FA ++ AP+IIFIDE+D
Sbjct: 359 GTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEID 418
Query: 282 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFS-STADIKVIAATNRVDILDPALLRSGR 339
AIG+KR + G E ++ +L++L ++DGF +T+ + VI ATNR+DILDPALLR GR
Sbjct: 419 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGR 478
Query: 340 LDRKIEFPHPNEEARARIMQIHSR-KMNVSPDVNYE---ELSRSTDDFNGAQCKAVCVEA 395
D+ I P+++ R I+++H+R K S D E E++ +T+DF GA+ + V EA
Sbjct: 479 FDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEA 538
Query: 396 GMIALRRGAAIVTHEDFMDAI 416
G++ R+ + E+ ++A+
Sbjct: 539 GILTARKDLDYIGREELLEAL 559
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 484 (175.4 bits), Expect = 2.6e-45, P = 2.6e-45
Identities = 97/254 (38%), Positives = 158/254 (62%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P + DIGG + Q+L EA+ P+ + + F+ +GI+PPKG+LLYGPPG KTLL
Sbjct: 613 VVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLL 672
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A ++ F+ + GP+L+ ++G+ + VRD F A++ +P+I+F DE+D + R
Sbjct: 673 AKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISR- 731
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
E +G V+R + +LL ++DG ++ +I ATNR DI+D A+LR+GR+DR +
Sbjct: 732 SGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISP 789
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR--GAAI 406
P+ +AR I IH +K+ S D++ +LS TD ++GA+ ++C EA + A++ A
Sbjct: 790 PDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKE 849
Query: 407 VTHEDFMDAIMEVQ 420
+ F+ AI V+
Sbjct: 850 INMSHFISAIGNVK 863
Score = 289 (106.8 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 70/205 (34%), Positives = 113/205 (55%)
Query: 117 KTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE-TLPAEYDARVKAM-EVDERPT 174
K + + + + ++ K+K L+ N S LI E T+ + + + ++D
Sbjct: 250 KDNIDNEFIKSIFRICESTKIK---LINSNLQSTLICESTINSNNNNNNNSNNKIDNNKN 306
Query: 175 EQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
+ IGGLD Q++++ E + L + + G++PPKG+LLYGPPGTGKTLLAR
Sbjct: 307 INLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIV 366
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A QT +T + G ++ F G K ++ F A +K+P+IIFIDELDA+ KR D+
Sbjct: 367 ATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSS 426
Query: 293 AGDREVQRTMLELLNQLDGFSSTAD 317
++ + ++L L+ DG ST+D
Sbjct: 427 EVEKRIVGSLLTLM---DGVVSTSD 448
Score = 126 (49.4 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 320 VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM-NVSPDVNYEELSR 378
VI TNR D +D AL R GR D +IE PN++ R +I+ I K+ N ++
Sbjct: 471 VIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIAS 530
Query: 379 STDDFNGAQCKAVCVEAGMIALRR 402
T F GA +++C EA + R
Sbjct: 531 KTHGFVGADIESLCKEASLKCFNR 554
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 102/252 (40%), Positives = 153/252 (60%)
Query: 165 KAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGT 223
KA ++ E + ++D+ G D+ +++ E V + +F LG + P G+LL G PGT
Sbjct: 140 KARQLSEEQIKTTFADVAGCDEAKEDVAELVDY-LREPSRFQKLGGRIPSGILLVGQPGT 198
Query: 224 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 283
GKTLLA+A A + K F ++G V+MF+G GA VRD F AK+ AP IIFIDE+DA+
Sbjct: 199 GKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAV 258
Query: 284 GTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK 343
G +R G E ++T+ ++L ++DGF + VIAATNR D+LDPALLR GR DR+
Sbjct: 259 GRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQ 318
Query: 344 IEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRG 403
+ P+ R +I+++H RK+ + DV E ++R T F+GA + EA + A R
Sbjct: 319 VTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTA 378
Query: 404 AAIVTHEDFMDA 415
+V+ ++F DA
Sbjct: 379 RRVVSMKEF-DA 389
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 480 (174.0 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 105/265 (39%), Positives = 158/265 (59%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A++ +D R ++D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 257 ETTAKILKNNIDVR----FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLT 311
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + K F+ + G + ++MF+G G VRD FA+A++ AP I+FID
Sbjct: 312 GPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 371
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DAIG KR G E + T+ ++L ++DGF+ST ++ V+A TNR DILDPAL R G
Sbjct: 372 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPG 431
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + R+ I ++H R + + + + LSR T F GA VC E
Sbjct: 432 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNE 491
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + V F AI V
Sbjct: 492 AALIAARHLSPSVQERHFEQAIERV 516
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 101/236 (42%), Positives = 144/236 (61%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G+D+ +E+ E V + KF LG + P GVLL GPPGTGKTLLA+A A +
Sbjct: 155 FDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEA 213
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
K F ++G V+MF+G GA VRD F AK++AP IIFIDE+DA+G R G
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHD 273
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E ++T+ +LL ++DGF I V+AATNR D+LDPALLR GR DR++ P P+ + R
Sbjct: 274 EREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREY 333
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDF 412
I+++H K+ ++ DV ++R T F+GA + EA + A R V+ +F
Sbjct: 334 ILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEF 389
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 479 (173.7 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 99/249 (39%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K E +E E Y D+GG+ KQ+ ++ E V LP+ H + F +G++PP+G+LL+GPPG
Sbjct: 194 IKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPG 253
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AFA ++ +PAI+FIDE+DA
Sbjct: 254 TGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDA 313
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EKA +R + +LL +DG + A + VIAATNR + +D AL R GR DR
Sbjct: 314 IAPKR---EKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDR 370
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+I+ P+ R I++IH++ M + DV+ E+++ F GA ++C EA + +R
Sbjct: 371 EIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 431 KMELIDLED 439
Score = 476 (172.6 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 96/233 (41%), Positives = 144/233 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P +SDIGGL +EL E V P+ H EK++ G+QP +GVL YGPPG GKTLL
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VRD F A+ AP ++F DELD+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
S R + ++L ++DG ++ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E +R +I + RK +S D++ L+++T F+GA +C A +A+R
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIR 705
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 479 (173.7 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 99/249 (39%), Positives = 154/249 (61%)
Query: 164 VKAMEVDERPTEQ-YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K E +E E Y D+GG+ KQ+ ++ E V LP+ H + F +G++PP+G+LL+GPPG
Sbjct: 194 IKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPG 253
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T + F + GP+++ G+ +R AFA ++ +PAI+FIDE+DA
Sbjct: 254 TGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDA 313
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EKA +R + +LL +DG + A + VIAATNR + +D AL R GR DR
Sbjct: 314 IAPKR---EKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDR 370
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+I+ P+ R I++IH++ M + DV+ E+++ F GA ++C EA + +R
Sbjct: 371 EIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 431 KMELIDLED 439
Score = 476 (172.6 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 96/233 (41%), Positives = 144/233 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P +SDIGGL +EL E V P+ H EK++ G+QP +GVL YGPPG GKTLL
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VRD F A+ AP ++F DELD+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 289 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPH 348
S R + ++L ++DG ++ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 349 PNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E +R +I + RK +S D++ L+++T F+GA +C A +A+R
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIR 705
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 478 (173.3 bits), Expect = 7.5e-45, P = 7.5e-45
Identities = 103/266 (38%), Positives = 161/266 (60%)
Query: 158 AEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLL 217
+E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 287 SETTAKVLRDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAIL 341
Query: 218 YGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFI 277
GPPGTGKTLLA+A A + F+ + G + ++MF+G G VRD F LA++ AP I+FI
Sbjct: 342 TGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFI 401
Query: 278 DELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRS 337
DE+DA+G KR G E + T+ +LL ++DGF++ ++ V+A TNR DILDPAL+R
Sbjct: 402 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRP 461
Query: 338 GRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCV 393
GR DR+I P+ + RA I ++H R + + +++ E L+R T F+GA VC
Sbjct: 462 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCN 521
Query: 394 EAGMIALRRGAAIVTHEDFMDAIMEV 419
EA +IA R + + + F AI V
Sbjct: 522 EAALIAARHLSDAINQKHFEQAIERV 547
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 478 (173.3 bits), Expect = 7.7e-45, P = 7.7e-45
Identities = 103/265 (38%), Positives = 161/265 (60%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A+V E+D + + D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 347
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ + G + ++MF+G G VRD FALA++ AP I+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DA+G KR G E + T+ +LL ++DGF++T ++ ++A TNR DILDPAL+R G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 467
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + RA I ++H R + + ++ + L+R T F+GA VC E
Sbjct: 468 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 527
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + + + F AI V
Sbjct: 528 AALIAARHLSDAINQKHFEQAIERV 552
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/259 (40%), Positives = 156/259 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ + M D+ T +SD+ G D + +E ++ +V + +F LG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + K F ++G V+MF+G GA VRD F AK+ +P IIFIDE+D
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ ++L ++DGF I VIAATNR D+LDPALLR GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+++H RK+ ++ DV ++R T F+GA + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 402 ---RGAAIVTHEDFMDAIM 417
R ++V E D IM
Sbjct: 379 GNKRNVSMVEFELAKDKIM 397
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/259 (40%), Positives = 156/259 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ + M D+ T +SD+ G D + +E ++ +V + +F LG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + K F ++G V+MF+G GA VRD F AK+ +P IIFIDE+D
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
A+G +R G E ++T+ ++L ++DGF I VIAATNR D+LDPALLR GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
R++ P+ R +I+++H RK+ ++ DV ++R T F+GA + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 402 ---RGAAIVTHEDFMDAIM 417
R ++V E D IM
Sbjct: 379 GNKRNVSMVEFELAKDKIM 397
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 105/245 (42%), Positives = 151/245 (61%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
+ D+ G D+ QE++E V + + +K+ +LG + PKG LL GPPGTGKTLLA+A A ++
Sbjct: 321 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 379
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
FL ++G ++MF+G G VR F A++ AP+IIFIDE+DAIG R G+
Sbjct: 380 GVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGND 439
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
E + T+ +LL ++DGF +TA + V+A TNR DILD ALLR GR DR+I P+ + R +
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 499
Query: 357 IMQIHSRKMNVSPDVNY--EELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMD 414
I +I+ +K+ + + +Y + L+ T F GA VC EA +IA R A VT F
Sbjct: 500 IFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFES 559
Query: 415 AIMEV 419
AI V
Sbjct: 560 AIDRV 564
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 126/399 (31%), Positives = 214/399 (53%)
Query: 45 KIMKSEVMRISHELQAQNEKIRENTEKIKVNKNLPYLVSNVIELLDVDPQDTEEDGAVVD 104
K K V + + +EKIR N ++ V NL +S+V+ + + ++
Sbjct: 59 KRRKETVCIVLSDDTCPDEKIRMN--RV-VRNNLCVHLSDVVSVQSCPDVKYGKRVRILP 115
Query: 105 LDAQRKGKCAVIKTSTRQTYFL----PV-IG--LVDAEKLKPGD--LVGVNKDSYLIL-- 153
+D +G + + YFL P+ +G + ++P + +V + + Y I+
Sbjct: 116 IDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAP 175
Query: 154 ETLP-AEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPP 212
ET+ + D + E + Y DIGG KQ+ ++ E V LP+ H F +G++PP
Sbjct: 176 ETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPP 235
Query: 213 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 272
+G+L+YGPPGTGKTL+ARA A +T + F + GP+++ G+ +R AF A++ +P
Sbjct: 236 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSP 295
Query: 273 AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDP 332
AIIFIDE+DAI KR + G+ E +R + +LL +DG ++ + V+AATNR + +DP
Sbjct: 296 AIIFIDEIDAIAPKR--DKTHGEVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDP 352
Query: 333 ALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVC 392
AL R GR DR+I+ P+ R +++IH++ M + DV+ E+++ + GA ++C
Sbjct: 353 ALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLC 412
Query: 393 VEAGMIALRRGAAIVTHEDF-MDA-IMEVQAKKKANLNY 429
EA + +R ++ ED +DA ++ A N Y
Sbjct: 413 SEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRY 451
Score = 468 (169.8 bits), Expect = 9.4e-44, P = 9.4e-44
Identities = 98/271 (36%), Positives = 160/271 (59%)
Query: 132 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 191
+DAE L + V +++ T + R +EV P ++DIGGL+ +EL
Sbjct: 434 IDAEVLAS---LAVTMENFRYAMTKSSPSALRETVVEV---PNTTWTDIGGLESVKKELQ 487
Query: 192 EAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 251
E V P+ H +KF+ G+QP +GVL YGPPG GKTLLA+A A + ++ F+ + GP+L+ M
Sbjct: 488 ELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 547
Query: 252 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 311
+ G+ VRD F A+ AP ++F DELD+I R + R + ++L ++DG
Sbjct: 548 WFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDG 607
Query: 312 FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDV 371
+ ++ +I ATNR DI+DPA+LR GRLD+ I P P++++R I++ + RK ++ +V
Sbjct: 608 MGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEV 667
Query: 372 NYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+ +++ T F+GA +C A +A+R+
Sbjct: 668 DLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 174 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACA 233
T ++D+ G+D+ +EL E +V + + EK+V LG +PP+GVLL G PGTGKTLLA+A A
Sbjct: 321 TITFADVAGVDEAKEEL-EEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 379
Query: 234 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 293
+ + F+ + + V++++G GA VRD FA AK++AP+IIFIDE+DA+ R +
Sbjct: 380 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRM 439
Query: 294 GDR-EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEE 352
G E ++T+ +LL ++DGF S + + V+ ATNR D+LDPAL R GR DR + P++
Sbjct: 440 GSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKI 499
Query: 353 ARARIMQIH-SRK-MNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHE 410
R I+++H S+K + + DVN ++ T F GA + EA ++A R+ V
Sbjct: 500 GRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKI 559
Query: 411 DFMDAIMEVQA---KKKANL 427
DF+ A+ A KK A L
Sbjct: 560 DFIQAVERSIAGIEKKSARL 579
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 454 (164.9 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 106/279 (37%), Positives = 163/279 (58%)
Query: 131 LVDAEKLKPGDLVGV-NKDSYLILETLPAEYDARVKAMEVDERPTE------QYSDIGGL 183
L++++K + G G NK L+ + E +A ++ + R TE ++ D+GG
Sbjct: 211 LLESDKKRKGRAKGKGNKRKTENLQEVDGEIEALLQK-KAKARSTELQISNVKFEDVGGN 269
Query: 184 DKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKL 243
D ++E+ + +++ M H E + +LG+ PP+GVLL+GPPG GKTLLA A A + LK+
Sbjct: 270 DATLKEVCK-MLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 328
Query: 244 AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML 303
A P++V G+ + +R+ F A AP I+FIDE+DAI KR + K +R + +L
Sbjct: 329 AAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLL 388
Query: 304 ELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 363
++ L+ ++TA + VI ATNR D LDPAL R+GR DR++ P+E AR RI+Q R
Sbjct: 389 TCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCR 448
Query: 364 KMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
K+ + N+ L+ T F GA A+C EA M A+ R
Sbjct: 449 KLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 414 (150.8 bits), Expect = 7.1e-40, Sum P(2) = 7.1e-40
Identities = 107/320 (33%), Positives = 168/320 (52%)
Query: 118 TSTRQTYFLPVIGLV-DAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 176
TS Q ++GL+ D + L + G+ + + L AE K P
Sbjct: 520 TSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVAL-AEVQPSAKREGFVTVPNVT 578
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
++DIG L+ ELI A++ P+ + ++F LG+ P G+LL GPPG GKTLLA+A A ++
Sbjct: 579 WADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANES 638
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F+ + GP+L+ M++G+ + VR F AK AP +IF DE+DA+ +R D E
Sbjct: 639 GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS- 697
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
R + +LL ++DG + + ++AATNR DI+DPA+LR GRLD+ + P R
Sbjct: 698 --VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVA 755
Query: 357 IMQIHSRKMNVSP---DVNYEELSRST--DDFNGAQCKAVCVEAGMIALRR--------- 402
I++ ++ P DVN E ++ + + GA A+ EA + ALR+
Sbjct: 756 ILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGV 815
Query: 403 --GAAIVTHEDFMDAIMEVQ 420
G V+H+ F DA +V+
Sbjct: 816 GAGELKVSHKHFEDAFKKVK 835
Score = 45 (20.9 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 26 LRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENTEK 71
L +S D NS+ + D+EI+I+K + S + + K + N K
Sbjct: 187 LDLSDDQSNSKKQ--DSEIQILKDSSLLESDKKRKGRAKGKGNKRK 230
Score = 41 (19.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 94 QDTE----EDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVI-GLVDA 134
QD+E +D ++++ D +RKG+ A K + R+T L + G ++A
Sbjct: 199 QDSEIQILKDSSLLESDKKRKGR-AKGKGNKRKTENLQEVDGEIEA 243
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 97/253 (38%), Positives = 162/253 (64%)
Query: 177 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQT 236
++D+ G+D+ EL E V + + +K+ G++ PKGVL+ GPPG GKTL+A+A A +
Sbjct: 151 FNDVAGVDEVKMELSELVDF-LQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEA 209
Query: 237 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 296
F +G V++++G GAK VR+ F+ AK AP+I+FIDE+DA+G R + +R
Sbjct: 210 GVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNV-ER 268
Query: 297 EVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 356
+ T+ +LL Q+DGF + + VIAATN+++++DPALLRSGR DR+I P+ + R +
Sbjct: 269 D--STLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLK 326
Query: 357 IMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAI 416
I++I+ + N ++N ++++++ F+GA + + EA + ALRR +A+V DF +
Sbjct: 327 ILEIYMKDKN--NNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVL 384
Query: 417 MEVQAKKKANLNY 429
+V KK L++
Sbjct: 385 NKVLLGKKKILSF 397
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 471 (170.9 bits), Expect = 4.1e-44, P = 4.1e-44
Identities = 103/265 (38%), Positives = 158/265 (59%)
Query: 159 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLY 218
E A++ +D R ++D+ G ++ E++E V + + +++ +LG + PKG +L
Sbjct: 285 ETTAKILKNNIDVR----FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLT 339
Query: 219 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 278
GPPGTGKTLLA+A A + F+ + G + ++MF+G G VRD FA+A++ AP I+FID
Sbjct: 340 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFID 399
Query: 279 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSG 338
E+DAIG KR G E + T+ ++L ++DGF+S+ ++ V+A TNR DILDPAL R G
Sbjct: 400 EIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPG 459
Query: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVE 394
R DR+I P+ + R+ I ++H R + + ++ + LSR T F GA VC E
Sbjct: 460 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNE 519
Query: 395 AGMIALRRGAAIVTHEDFMDAIMEV 419
A +IA R + V F AI V
Sbjct: 520 AALIAARHLSPSVQERHFEQAIERV 544
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 439 (159.6 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 94/240 (39%), Positives = 141/240 (58%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ K + ++ D+ G D+ +E++E V + K+ LG + P+G +L GPP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKF-LQDPHKYEKLGAKIPRGAILSGPP 329
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + FL ++G + V+MF+G GA VRD F A+E APAIIF+DE+D
Sbjct: 330 GTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEID 389
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
AIG +R + G+ E + T+ +LL ++DGF +T + V+A TNR DILD ALLR GR D
Sbjct: 390 AIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFD 449
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVE--AGMIA 399
R I P+ E R +I ++H K+ + + + + D Q K +E AG +A
Sbjct: 450 RHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRLA 509
Score = 56 (24.8 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA--KKKANL 427
L+ T F GA C E +IA R A V F AI V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 439 (159.6 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 94/240 (39%), Positives = 141/240 (58%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
++ K + ++ D+ G D+ +E++E V + K+ LG + P+G +L GPP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKF-LQDPHKYEKLGAKIPRGAILSGPP 329
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A + FL ++G + V+MF+G GA VRD F A+E APAIIF+DE+D
Sbjct: 330 GTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEID 389
Query: 282 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLD 341
AIG +R + G+ E + T+ +LL ++DGF +T + V+A TNR DILD ALLR GR D
Sbjct: 390 AIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFD 449
Query: 342 RKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVE--AGMIA 399
R I P+ E R +I ++H K+ + + + + D Q K +E AG +A
Sbjct: 450 RHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRLA 509
Score = 56 (24.8 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRRGAAIVTHEDFMDAIMEVQA--KKKANL 427
L+ T F GA C E +IA R A V F AI V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 439 (159.6 bits), Expect = 5.8e-44, Sum P(2) = 5.8e-44
Identities = 102/267 (38%), Positives = 156/267 (58%)
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
K K DL V+ + +L+ A+ + +E + ++ D+GG D ++E+ + ++
Sbjct: 112 KRKKEDLQEVDGEIEAVLQK-----KAKARGLEF-QISNVKFEDVGGNDMTLKEVCK-ML 164
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
+ M H E + +LG+ PP+GVLL+GPPG GKTLLA A A + LK+A P++V G+
Sbjct: 165 IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGE 224
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
+ +R+ F A AP IIFIDE+DAI KR + K +R + +L ++ L+ ++T
Sbjct: 225 SEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAAT 284
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
A + VI ATNR D LDPAL R+GR DR+I P+E +R RI+Q RK+ + ++
Sbjct: 285 ARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCH 344
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRR 402
L+ T F GA A+C EA M A+ R
Sbjct: 345 LAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 410 (149.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 98/275 (35%), Positives = 154/275 (56%)
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
P ++DIG L+ +EL A++ P+ + ++F LG+ P GVLL GPPG GKTLLA+A
Sbjct: 459 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 518
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK 292
A ++ F+ + GP+L+ M++G+ + VR F AK AP +IF DE+DA+ +R D E
Sbjct: 519 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 578
Query: 293 AGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRK--IEFPHPN 350
R + +LL ++DG + + ++AATNR DI+DPA+LR GRLD+ + P P
Sbjct: 579 GAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 635
Query: 351 EE-ARARIMQIHSRKMNVSPDVNYEELSRST--DDFNGAQCKAVCVEAGMIALR------ 401
+ A + + + K + DVN E ++ D + GA A+ EA + ALR
Sbjct: 636 DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQ 695
Query: 402 -----RGAAIVTHEDFMDAIMEVQAK--KKANLNY 429
+G V+H+ F +A +V++ KK + Y
Sbjct: 696 KSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMY 730
Score = 53 (23.7 bits), Expect = 5.8e-44, Sum P(2) = 5.8e-44
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 92 DPQDTEEDGAVVDLDAQRKGK 112
DPQD++ D ++++ D +RKGK
Sbjct: 86 DPQDSK-DSSLLESDMKRKGK 105
Score = 41 (19.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 16 EGEESLGDDILRMST--DDINSR-TRLLDNEIKI---MKSE-VMRISHELQAQNEKIREN 68
E ES DD M D +S+ + LL++++K +K++ R +LQ + +I
Sbjct: 69 EYTESYSDDDSSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAV 128
Query: 69 TEKIKVNKNLPYLVSNVIELLDVDPQD 95
+K + L + +SNV + DV D
Sbjct: 129 LQKKAKARGLEFQISNV-KFEDVGGND 154
Score = 37 (18.1 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 153 LETLPAEYDA-RVKAMEVDERPTEQYSD 179
L L E+ A R + E D TE YSD
Sbjct: 49 LTELEDEHLAKRARQGEEDNEYTESYSD 76
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 470 (170.5 bits), Expect = 5.9e-44, P = 5.9e-44
Identities = 96/234 (41%), Positives = 145/234 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P +SDIGGL +EL E V P+ H EK++ G+QP +GVL YGPPG GKTLL
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VRD F A+ AP ++F DELD+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 289 DSEKA-GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
G R + ++L ++DG ++ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E +R +I++ RK +S D++ L+++T F+GA +C A +A+R
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
Score = 470 (170.5 bits), Expect = 5.9e-44, P = 5.9e-44
Identities = 97/249 (38%), Positives = 152/249 (61%)
Query: 164 VKAMEVDERPTE-QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K E +E + Y D+GG+ KQ+ ++ E V LP+ H + F +GI+PP+G+LL+GPPG
Sbjct: 195 IKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPG 254
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T S F + GP+++ G+ +R AF ++ PAI+FIDE+DA
Sbjct: 255 TGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDA 314
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG +++ VIAATNR + +D AL R GR DR
Sbjct: 315 IAPKR---EKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+I+ P+ R I++IH++ M ++ DV+ E+++ F GA ++C EA + +R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 432 KMELIDLED 440
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 470 (170.5 bits), Expect = 5.9e-44, P = 5.9e-44
Identities = 96/234 (41%), Positives = 145/234 (61%)
Query: 169 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLL 228
V E P +SDIGGL +EL E V P+ H EK++ G+QP +GVL YGPPG GKTLL
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 229 ARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 288
A+A A + ++ F+ + GP+L+ M+ G+ VRD F A+ AP ++F DELD+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 289 DSEKA-GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP 347
G R + ++L ++DG ++ ++ +I ATNR DI+DPA+LR GRLD+ I P
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 348 HPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALR 401
P+E +R +I++ RK +S D++ L+++T F+GA +C A +A+R
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
Score = 470 (170.5 bits), Expect = 5.9e-44, P = 5.9e-44
Identities = 97/249 (38%), Positives = 152/249 (61%)
Query: 164 VKAMEVDERPTE-QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPG 222
+K E +E + Y D+GG+ KQ+ ++ E V LP+ H + F +GI+PP+G+LL+GPPG
Sbjct: 195 IKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPG 254
Query: 223 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 282
TGKTL+ARA A +T S F + GP+++ G+ +R AF ++ PAI+FIDE+DA
Sbjct: 255 TGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDA 314
Query: 283 IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDR 342
I KR EK +R + +LL +DG +++ VIAATNR + +D AL R GR DR
Sbjct: 315 IAPKR---EKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 343 KIEFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRSTDDFNGAQCKAVCVEAGMIALRR 402
+I+ P+ R I++IH++ M ++ DV+ E+++ F GA ++C EA + +R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 403 GAAIVTHED 411
++ ED
Sbjct: 432 KMELIDLED 440
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 439 (159.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 102/267 (38%), Positives = 156/267 (58%)
Query: 136 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 195
K K DL V+ + +L+ A+ + +E + ++ D+GG D ++E+ + ++
Sbjct: 123 KRKKEDLQEVDGEIEAVLQK-----KAKARGLEF-QISNVKFEDVGGNDMTLKEVCK-ML 175
Query: 196 LPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD 255
+ M H E + +LG+ PP+GVLL+GPPG GKTLLA A A + LK+A P++V G+
Sbjct: 176 IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGE 235
Query: 256 GAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 315
+ +R+ F A AP IIFIDE+DAI KR + K +R + +L ++ L+ ++T
Sbjct: 236 SEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAAT 295
Query: 316 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNYEE 375
A + VI ATNR D LDPAL R+GR DR+I P+E +R RI+Q RK+ + ++
Sbjct: 296 ARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCH 355
Query: 376 LSRSTDDFNGAQCKAVCVEAGMIALRR 402
L+ T F GA A+C EA M A+ R
Sbjct: 356 LAHLTPGFVGADLMALCREAAMCAVNR 382
Score = 266 (98.7 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 173 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGKTLLARAC 232
P ++DIG L+ +EL A++ P+ + ++F LG+ P GVLL GPPG GKTLLA+A
Sbjct: 470 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 529
Query: 233 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 291
A ++ F+ + GP+L+ M++G+ + VR F AK AP +IF DE+DA+ +R D E
Sbjct: 530 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRE 588
Score = 40 (19.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 94 QDTEEDGAVVDLDAQRKGK 112
QD++ D ++++ D +RKGK
Sbjct: 99 QDSK-DSSLLESDMKRKGK 116
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 469 (170.2 bits), Expect = 7.8e-44, P = 7.8e-44
Identities = 106/261 (40%), Positives = 158/261 (60%)
Query: 162 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPP 221
A++ + + + + D+ G ++ QE++E V + + +K+ +LG + PKG LL GPP
Sbjct: 311 AQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPP 369
Query: 222 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 281
GTGKTLLA+A A ++ FL ++G ++MF+G G VR+ F A++ AP+IIFIDE+D
Sbjct: 370 GTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEID 429
Query: 282 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRL 340
AIG R G+ E + T+ +LL ++DGF +TA + V+A TNR DILD ALLR GR
Sbjct: 430 AIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 489
Query: 341 DRKIEFPHPNEEARARIMQIHSRKMNVSPDVNY--EELSRSTDDFNGAQCKAVCVEAGMI 398
DR+I P+ + R +I QI+ +K+ + + +Y + L+ T F GA VC EA +I
Sbjct: 490 DRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALI 549
Query: 399 ALRRGAAIVTHEDFMDAIMEV 419
A R A VT F AI V
Sbjct: 550 AARHEGATVTMAHFDSAIDRV 570
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 438 (159.2 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 99/262 (37%), Positives = 155/262 (59%)
Query: 166 AMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTGK 225
A+ + P ++ D+GGL+ +++ V LP+ HK+ F + G++ GVLLYGPPGTGK
Sbjct: 646 ALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGK 704
Query: 226 TLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGT 285
TLLA+A A + FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++
Sbjct: 705 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAP 764
Query: 286 KRFDSEKAGDREVQRTMLELLNQLDGFS-STADIKVIAATNRVDILDPALLRSGRLDRKI 344
R S +G + R + ++L ++DG S S+ D+ +I A+NR D++DPALLR GR D K+
Sbjct: 765 ARGASGDSGG-VMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFD-KL 822
Query: 345 EFPHPNEEA--RARIMQIHSRKMNVSPDVN-YEELSRSTDDFNGAQCKAVCVEAGMIALR 401
+ N +A R R+++ +RK +S DV+ Y + F GA A+C +A A +
Sbjct: 823 LYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAK 882
Query: 402 RGAA------IVTHEDFMDAIM 417
R + + T ED D+++
Sbjct: 883 RKVSKSDSGDMPTEEDDPDSVV 904
Score = 59 (25.8 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 10 EDSSIWEGEESLGDDILRMSTDDINSRTRLLDNEIKIMKSEVMRISHELQAQNEKIRENT 69
+D + G L ILR D N LD+ + S ++ +S +L +++ N+
Sbjct: 37 KDGDLLRGNARLSAGILRWRKDGENVSDAKLDS---LDDSALVGLSTQLL---KRLSINS 90
Query: 70 EKIKVNKNLPYLVSNVIELLDVDPQDTE-EDGAVVDL 105
+ V KN+ + V +++ +DP T ED ++ +
Sbjct: 91 GSLVVVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQV 127
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 455 (165.2 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 100/259 (38%), Positives = 147/259 (56%)
Query: 165 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIQPPKGVLLYGPPGTG 224
K+ V T + D+ G+D+ +E++E V + ++ LG + PKG +L GPPGTG
Sbjct: 341 KSKAVKATSTTTFKDVAGMDEAKEEIMEFVSF-LKDPSRYKKLGARIPKGAILSGPPGTG 399
Query: 225 KTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 284
KTLLA+A A + F ++G ++MF+G G VRD F A+ P I+FIDE+DA+G
Sbjct: 400 KTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVG 459
Query: 285 TKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKI 344
R D E + T+ +LL ++DGFSST+ + V A TNR D+LDPALLR GR DR+I
Sbjct: 460 RARSRGGFHND-ERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQI 518
Query: 345 EFPHPNEEARARIMQIHSRKMNVSPDVNYEELSRS----TDDFNGAQCKAVCVEAGMIAL 400
P+ + R I +H + N+ D EE+++ T F+GA VC E ++A
Sbjct: 519 YVGKPDIKGRKDIFMVHLK--NIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAA 576
Query: 401 RRGAAIVTHEDFMDAIMEV 419
R+ A + F +AI V
Sbjct: 577 RKDATSANFDHFEEAIERV 595
Score = 38 (18.4 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 54 ISHELQAQNEKIRENTEKIKVNK 76
+ ++ + +NEK+++ EK + K
Sbjct: 128 VENKKENENEKVKDEKEKDEKEK 150
WARNING: HSPs involving 469 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 431 431 0.00086 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 719
No. of states in DFA: 599 (64 KB)
Total size of DFA: 226 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.53u 0.11s 42.64t Elapsed: 00:00:03
Total cpu time: 42.59u 0.11s 42.70t Elapsed: 00:00:03
Start: Thu Aug 15 12:56:50 2013 End: Thu Aug 15 12:56:53 2013
WARNINGS ISSUED: 2