Query psy15153
Match_columns 169
No_of_seqs 281 out of 2375
Neff 8.0
Searched_HMMs 13730
Date Fri Aug 16 21:57:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15153.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15153hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wpga4 f.33.1.1 (A:1-124,A:24 99.7 3.1E-18 2.2E-22 144.5 9.5 80 81-160 1-80 (472)
2 d1wpga4 f.33.1.1 (A:1-124,A:24 99.5 8.3E-15 6E-19 123.3 8.1 72 5-76 1-72 (472)
3 d1irza_ a.4.1.11 (A:) Arr10-B 37.3 25 0.0018 19.8 4.0 26 12-40 31-56 (64)
4 d3c1va1 a.39.1.2 (A:2-94) Calc 32.6 30 0.0022 20.5 4.1 49 89-137 11-61 (93)
5 d1lghb_ f.3.1.1 (B:) Light-har 32.1 16 0.0012 19.0 2.3 11 102-112 4-14 (43)
6 d2csba4 a.60.2.4 (A:465-519) T 30.1 19 0.0014 18.9 2.4 17 102-118 10-26 (55)
7 d1zfsa1 a.39.1.2 (A:1-93) Calc 30.0 49 0.0035 19.2 5.0 34 104-137 28-61 (93)
8 d1qiba_ d.92.1.11 (A:) Gelatin 29.7 21 0.0015 22.7 3.2 20 100-119 141-160 (161)
9 d1gjja2 a.140.1.1 (A:111-153) 24.6 6.8 0.00049 20.6 -0.2 23 103-125 4-26 (43)
10 d1ksoa_ a.39.1.2 (A:) Calcycli 22.3 73 0.0053 18.7 5.5 49 89-137 11-61 (93)
11 d1hfca_ d.92.1.11 (A:) Fibrobl 21.9 35 0.0026 21.4 3.2 18 102-119 140-157 (157)
12 d3proc1 d.52.1.1 (C:6-85) Alph 21.1 8.7 0.00063 22.9 -0.2 23 91-115 2-24 (80)
13 d1e8aa_ a.39.1.2 (A:) Calcycli 20.2 80 0.0058 18.3 5.0 49 89-137 10-60 (87)
No 1
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.73 E-value=3.1e-18 Score=144.53 Aligned_cols=80 Identities=21% Similarity=0.188 Sum_probs=76.4
Q ss_pred hHHhhhcCHHHHHHHhCCCcCCCCCHHHHHHHHHhhcCCcccCCCCChHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccC
Q psy15153 81 TNEASLMGAEEVAARLRVDCRSGLWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQVRKSVFLLFFYCFPFSTKFSVRFP 160 (169)
Q Consensus 81 ~~~~~~~~~~ev~~~l~~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~liL~~aaiis~~~~~~~~ 160 (169)
|+++|+.+++|++++|++|+++|||++||++|+++||+|++++++++++|+.|++||+||++++|+++|++|+++|...+
T Consensus 1 m~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 80 (472)
T d1wpga4 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 80 (472)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC
T ss_pred CcChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999999899999999999999999999999999999999999999999999999999999998655
No 2
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.52 E-value=8.3e-15 Score=123.26 Aligned_cols=72 Identities=24% Similarity=0.272 Sum_probs=67.9
Q ss_pred cHHhhcCCHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCCccCCchHHHHHHHHHhhHHHHHHHHHHHHH
Q psy15153 5 TNEASLMGAEEVAARLRVDCRSGLWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQVRKSVFLLFFIASKEE 76 (169)
Q Consensus 5 ~~~~~~~~~~e~~~~l~~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~qf~~p~~llL~~~~~~~ 76 (169)
|+++|+.+++|+++.|++|.++|||++||++|+++||+|++++++++|+|+.+++||+||++++|++++...
T Consensus 1 m~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls 72 (472)
T d1wpga4 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACIS 72 (472)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHH
T ss_pred CcChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 678999999999999999998999999999999999999999999999999999999999999999876543
No 3
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=37.27 E-value=25 Score=19.78 Aligned_cols=26 Identities=15% Similarity=0.104 Sum_probs=19.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Q psy15153 12 GAEEVAARLRVDCRSGLWWKEAELRRQLI 40 (169)
Q Consensus 12 ~~~e~~~~l~~~~~~GLs~~ea~~r~~~~ 40 (169)
.+..+++..++. |||..+++..+++|
T Consensus 31 tpk~I~~~m~v~---~lT~~qV~SHlQKY 56 (64)
T d1irza_ 31 VPKKILDLMNVD---KLTRENVASHLQKF 56 (64)
T ss_dssp CHHHHHHHHCCT---TCCHHHHHHHHHHH
T ss_pred chHHHHHHcCCC---CCCHHHHHHHHHHH
Confidence 345566666553 99999999999988
No 4
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}
Probab=32.55 E-value=30 Score=20.50 Aligned_cols=49 Identities=6% Similarity=-0.088 Sum_probs=29.1
Q ss_pred HHHHHHHh-CCCcCCC-CCHHHHHHHHHhhcCCcccCCCCChHHHHHHHHH
Q psy15153 89 AEEVAARL-RVDCRSG-LWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQV 137 (169)
Q Consensus 89 ~~ev~~~l-~~~~~~G-Ls~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~ 137 (169)
+.+++.++ ..+-..| |+.+|.++-++.-+++.+.....+..+..+++.+
T Consensus 11 l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~ 61 (93)
T d3c1va1 11 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL 61 (93)
T ss_dssp HHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHH
Confidence 34555555 3332345 8888888777776666555555555566666554
No 5
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=32.07 E-value=16 Score=19.04 Aligned_cols=11 Identities=45% Similarity=0.193 Sum_probs=9.3
Q ss_pred CCCCHHHHHHH
Q psy15153 102 SGLWWKEAELR 112 (169)
Q Consensus 102 ~GLs~~ev~~r 112 (169)
.|||++||++-
T Consensus 4 sGLT~~EA~Ef 14 (43)
T d1lghb_ 4 SGLTEEEAIAV 14 (43)
T ss_dssp SSCCHHHHHHH
T ss_pred CcCCHHHHHHH
Confidence 69999998875
No 6
>d2csba4 a.60.2.4 (A:465-519) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=30.12 E-value=19 Score=18.87 Aligned_cols=17 Identities=24% Similarity=0.095 Sum_probs=15.4
Q ss_pred CCCCHHHHHHHHHhhcC
Q psy15153 102 SGLWWKEAELRRQLIGY 118 (169)
Q Consensus 102 ~GLs~~ev~~r~~~~G~ 118 (169)
.|++.+.+++.+++||-
T Consensus 10 rgidreraerllkkygg 26 (55)
T d2csba4 10 RGIDRERAERLLKKYGG 26 (55)
T ss_dssp TTCCHHHHHHHHHHHTS
T ss_pred ecccHHHHHHHHHHhcC
Confidence 69999999999999984
No 7
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}
Probab=30.02 E-value=49 Score=19.23 Aligned_cols=34 Identities=18% Similarity=-0.025 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHhhcCCcccCCCCChHHHHHHHHH
Q psy15153 104 LWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQV 137 (169)
Q Consensus 104 Ls~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~ 137 (169)
||.+|.++-+..-+++....+..+..+..++..+
T Consensus 28 is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 61 (93)
T d1zfsa1 28 LSKKELKDLLQTELSSFLDVQKDADAVDKIMKEL 61 (93)
T ss_dssp EEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence 7778877777777776666555556666666554
No 8
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.67 E-value=21 Score=22.69 Aligned_cols=20 Identities=15% Similarity=0.007 Sum_probs=17.8
Q ss_pred cCCCCCHHHHHHHHHhhcCC
Q psy15153 100 CRSGLWWKEAELRRQLIGYN 119 (169)
Q Consensus 100 ~~~GLs~~ev~~r~~~~G~N 119 (169)
...+|+.++++.-++.||+|
T Consensus 141 ~~~~l~~~Di~~i~~LYG~~ 160 (161)
T d1qiba_ 141 KNFRLSQDDIKGIQELYGAS 160 (161)
T ss_dssp SSCCCCHHHHHHHHHHHCCC
T ss_pred CCCCCCHHHHHHHHHHhCcC
Confidence 34689999999999999988
No 9
>d1gjja2 a.140.1.1 (A:111-153) Thymopoietin, LAP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.55 E-value=6.8 Score=20.59 Aligned_cols=23 Identities=13% Similarity=-0.169 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHhhcCCcccCCC
Q psy15153 103 GLWWKEAELRRQLIGYNEFCVKE 125 (169)
Q Consensus 103 GLs~~ev~~r~~~~G~N~l~~~~ 125 (169)
.||++|..+++.+||.|--|-..
T Consensus 4 ~Lsd~eLr~~L~~~G~~~GPIt~ 26 (43)
T d1gjja2 4 ELTNEDLLDQLVKYGVNPGPIVG 26 (43)
T ss_dssp EECHHHHHHEEEBTTCCCCCCCS
T ss_pred hcCHHHHHHHHHHcCCCCCCcCc
Confidence 68999999999999999888543
No 10
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=22.31 E-value=73 Score=18.66 Aligned_cols=49 Identities=8% Similarity=-0.219 Sum_probs=33.9
Q ss_pred HHHHHHHh-CCCcCCC-CCHHHHHHHHHhhcCCcccCCCCChHHHHHHHHH
Q psy15153 89 AEEVAARL-RVDCRSG-LWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQV 137 (169)
Q Consensus 89 ~~ev~~~l-~~~~~~G-Ls~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~ 137 (169)
+-+++.++ ..+-..+ ||.+|.++-++.-+++-+..+.....+..++..+
T Consensus 11 i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~l 61 (93)
T d1ksoa_ 11 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVL 61 (93)
T ss_dssp HHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHH
Confidence 44555555 3332222 9999999998888888887766677788887664
No 11
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.94 E-value=35 Score=21.38 Aligned_cols=18 Identities=11% Similarity=0.060 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHHHhhcCC
Q psy15153 102 SGLWWKEAELRRQLIGYN 119 (169)
Q Consensus 102 ~GLs~~ev~~r~~~~G~N 119 (169)
..|+..+++.-+..||+|
T Consensus 140 ~~l~~~Di~~i~~lYG~n 157 (157)
T d1hfca_ 140 VQLAQDDIDGIQAIYGRS 157 (157)
T ss_dssp CCCCHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHcCCC
Confidence 469999999999999998
No 12
>d3proc1 d.52.1.1 (C:6-85) Alpha-lytic protease prodomain {Lysobacter enzymogenes [TaxId: 69]}
Probab=21.10 E-value=8.7 Score=22.95 Aligned_cols=23 Identities=13% Similarity=0.133 Sum_probs=16.3
Q ss_pred HHHHHhCCCcCCCCCHHHHHHHHHh
Q psy15153 91 EVAARLRVDCRSGLWWKEAELRRQL 115 (169)
Q Consensus 91 ev~~~l~~~~~~GLs~~ev~~r~~~ 115 (169)
+++..++-| -|||.+|+..|+..
T Consensus 2 ~l~~AmqRD--LgLt~~qa~~RLa~ 24 (80)
T d3proc1 2 QLKFAMQRD--LGIFPTQLPQYLQT 24 (80)
T ss_dssp HHHHHHHHH--HCCCGGGHHHHHHH
T ss_pred hHHHHHHHH--cCCCHHHHHHHHHH
Confidence 345555555 39999999988874
No 13
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=20.23 E-value=80 Score=18.29 Aligned_cols=49 Identities=8% Similarity=-0.081 Sum_probs=33.4
Q ss_pred HHHHHHHhCC-CcCCC-CCHHHHHHHHHhhcCCcccCCCCChHHHHHHHHH
Q psy15153 89 AEEVAARLRV-DCRSG-LWWKEAELRRQLIGYNEFCVKEEDPLWRKYIEQV 137 (169)
Q Consensus 89 ~~ev~~~l~~-~~~~G-Ls~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~ 137 (169)
+-+++.++.. +...| ||.+|.++.++.-++|-+..++.+..+..+++.+
T Consensus 10 li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~l 60 (87)
T d1e8aa_ 10 IVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGL 60 (87)
T ss_dssp HHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHH
Confidence 4455555533 22223 9999999999888888877666666777777654
Done!