Query psy15157
Match_columns 344
No_of_seqs 512 out of 3429
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 22:02:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.7E-38 9.3E-43 283.4 30.7 302 14-342 5-350 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 4.8E-35 1.6E-39 251.9 31.3 216 112-330 6-272 (304)
3 3frx_A Guanine nucleotide-bind 100.0 1.3E-33 4.3E-38 244.6 30.5 212 112-343 10-250 (319)
4 4ery_A WD repeat-containing pr 100.0 5.6E-33 1.9E-37 239.7 33.3 207 109-336 13-242 (312)
5 2pm7_B Protein transport prote 100.0 3.2E-33 1.1E-37 239.7 30.3 212 114-343 4-267 (297)
6 1got_B GT-beta; complex (GTP-b 100.0 1.2E-32 4E-37 240.7 33.2 212 111-343 47-283 (340)
7 1vyh_C Platelet-activating fac 100.0 2.3E-33 7.8E-38 251.4 28.2 207 112-342 143-392 (410)
8 3ow8_A WD repeat-containing pr 100.0 8.2E-33 2.8E-37 239.7 29.8 206 113-342 74-302 (321)
9 2pbi_B Guanine nucleotide-bind 100.0 3.8E-32 1.3E-36 238.7 33.4 213 111-343 56-297 (354)
10 3ow8_A WD repeat-containing pr 100.0 4.7E-33 1.6E-37 241.2 27.2 207 114-342 27-260 (321)
11 4gqb_B Methylosome protein 50; 100.0 2.3E-32 7.7E-37 238.9 29.5 206 115-342 78-311 (344)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-32 9.8E-37 238.7 29.1 188 112-316 8-224 (345)
13 4gqb_B Methylosome protein 50; 100.0 3.9E-32 1.3E-36 237.5 28.9 186 113-319 121-333 (344)
14 2xzm_R RACK1; ribosome, transl 100.0 1.6E-31 5.4E-36 233.8 31.7 213 111-342 13-267 (343)
15 1got_B GT-beta; complex (GTP-b 100.0 1.6E-31 5.6E-36 233.5 30.8 214 111-343 89-325 (340)
16 1nr0_A Actin interacting prote 100.0 2.1E-31 7.3E-36 250.5 30.9 224 76-326 22-279 (611)
17 3iz6_a 40S ribosomal protein R 100.0 2.3E-32 7.9E-37 242.5 23.0 213 111-343 58-311 (380)
18 4aow_A Guanine nucleotide-bind 100.0 7.5E-31 2.6E-35 228.5 31.9 200 112-328 31-257 (340)
19 3bg1_A Protein SEC13 homolog; 100.0 3E-32 1E-36 235.6 22.7 210 114-343 8-275 (316)
20 4g56_B MGC81050 protein; prote 100.0 2.3E-31 7.9E-36 234.0 26.9 186 114-320 134-346 (357)
21 4ery_A WD repeat-containing pr 100.0 1.1E-30 3.7E-35 225.3 29.7 208 112-341 58-290 (312)
22 2pbi_B Guanine nucleotide-bind 100.0 2.1E-30 7.3E-35 227.6 32.0 216 112-343 99-339 (354)
23 2hes_X YDR267CP; beta-propelle 100.0 8.9E-31 3E-35 227.8 29.1 199 112-330 7-252 (330)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-31 1.5E-35 231.2 27.0 198 112-325 98-343 (345)
25 3zwl_B Eukaryotic translation 100.0 4.9E-30 1.7E-34 225.5 33.5 208 109-342 22-271 (369)
26 4e54_B DNA damage-binding prot 100.0 1.3E-31 4.6E-36 241.8 23.4 198 114-328 114-338 (435)
27 3frx_A Guanine nucleotide-bind 100.0 3.5E-30 1.2E-34 223.0 31.3 208 111-343 57-299 (319)
28 3jrp_A Fusion protein of prote 100.0 9.8E-31 3.3E-35 231.0 28.1 213 113-343 5-269 (379)
29 3dm0_A Maltose-binding peripla 100.0 1.4E-30 4.6E-35 248.6 30.8 210 113-342 376-614 (694)
30 1erj_A Transcriptional repress 100.0 1.9E-30 6.3E-35 231.2 29.5 195 118-335 122-359 (393)
31 2hes_X YDR267CP; beta-propelle 100.0 2.4E-30 8.3E-35 225.0 29.1 190 117-319 56-282 (330)
32 2xzm_R RACK1; ribosome, transl 100.0 3.9E-30 1.3E-34 224.9 30.3 211 111-343 68-322 (343)
33 2ymu_A WD-40 repeat protein; u 100.0 1.2E-30 4.2E-35 243.5 28.5 204 111-342 8-274 (577)
34 1k8k_C P40, ARP2/3 complex 41 100.0 3.3E-30 1.1E-34 227.2 28.1 207 115-341 4-255 (372)
35 1erj_A Transcriptional repress 100.0 8.6E-30 2.9E-34 226.9 30.6 220 116-341 61-321 (393)
36 4h5i_A Guanine nucleotide-exch 100.0 1.7E-30 5.7E-35 229.2 25.7 181 117-318 131-344 (365)
37 4g56_B MGC81050 protein; prote 100.0 8E-31 2.8E-35 230.5 22.9 210 116-342 39-281 (357)
38 3ei3_B DNA damage-binding prot 100.0 4.9E-30 1.7E-34 227.5 27.9 197 113-328 67-293 (383)
39 3mmy_A MRNA export factor; mRN 100.0 5.2E-30 1.8E-34 225.2 27.8 211 111-343 31-328 (368)
40 3dwl_C Actin-related protein 2 100.0 1.4E-31 4.9E-36 236.7 17.0 207 115-342 7-263 (377)
41 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-29 8E-34 219.1 30.6 190 113-318 5-250 (351)
42 1nr0_A Actin interacting prote 100.0 7.7E-30 2.6E-34 239.9 29.2 196 114-329 142-368 (611)
43 3iz6_a 40S ribosomal protein R 100.0 2.1E-30 7.2E-35 229.8 23.0 248 77-343 71-357 (380)
44 2pm7_B Protein transport prote 100.0 1.6E-29 5.4E-34 216.6 27.6 189 112-317 46-285 (297)
45 2aq5_A Coronin-1A; WD40 repeat 100.0 4E-30 1.4E-34 229.7 24.7 218 114-343 76-326 (402)
46 2ymu_A WD-40 repeat protein; u 100.0 5.5E-29 1.9E-33 232.3 31.0 205 111-343 336-562 (577)
47 1gxr_A ESG1, transducin-like e 100.0 3.3E-28 1.1E-32 211.2 31.5 203 116-342 94-318 (337)
48 3dm0_A Maltose-binding peripla 100.0 7.4E-29 2.5E-33 236.7 29.8 195 111-327 422-642 (694)
49 3k26_A Polycomb protein EED; W 100.0 2.6E-29 8.9E-34 220.7 22.7 207 117-343 67-348 (366)
50 1gxr_A ESG1, transducin-like e 100.0 5.8E-28 2E-32 209.7 30.9 212 112-343 44-278 (337)
51 4aow_A Guanine nucleotide-bind 100.0 9.5E-29 3.3E-33 215.2 25.3 240 75-319 41-339 (340)
52 3jro_A Fusion protein of prote 100.0 3.5E-29 1.2E-33 240.7 24.2 213 113-343 3-267 (753)
53 3vl1_A 26S proteasome regulato 100.0 3.6E-28 1.2E-32 218.0 28.7 189 117-327 96-333 (420)
54 3dw8_B Serine/threonine-protei 100.0 7.1E-29 2.4E-33 224.3 24.3 205 117-331 26-330 (447)
55 3v7d_B Cell division control p 100.0 6.8E-28 2.3E-32 219.1 29.7 201 111-336 113-360 (464)
56 3jrp_A Fusion protein of prote 100.0 3.4E-28 1.2E-32 214.6 26.9 193 111-319 47-289 (379)
57 4gga_A P55CDC, cell division c 100.0 3E-28 1E-32 218.9 26.9 216 113-330 141-408 (420)
58 3gre_A Serine/threonine-protei 100.0 1.3E-28 4.3E-33 222.3 24.5 206 111-330 54-305 (437)
59 1r5m_A SIR4-interacting protei 100.0 7.3E-28 2.5E-32 215.7 29.3 204 118-343 107-407 (425)
60 3bg1_A Protein SEC13 homolog; 100.0 7.3E-29 2.5E-33 214.4 21.0 228 77-326 18-305 (316)
61 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-28 1.1E-32 236.2 27.8 208 112-342 6-240 (814)
62 2ynn_A Coatomer subunit beta'; 100.0 7.3E-28 2.5E-32 207.0 26.9 187 111-318 89-303 (304)
63 3f3f_A Nucleoporin SEH1; struc 100.0 9.3E-28 3.2E-32 208.9 27.6 204 111-325 49-345 (351)
64 4ggc_A P55CDC, cell division c 100.0 7.3E-28 2.5E-32 207.6 26.4 205 113-319 61-317 (318)
65 2w18_A PALB2, fancn, partner a 100.0 1E-28 3.5E-33 209.7 19.7 195 118-315 110-355 (356)
66 3odt_A Protein DOA1; ubiquitin 100.0 3E-27 1E-31 203.2 29.1 206 110-342 9-237 (313)
67 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-28 1.3E-32 222.8 24.3 194 114-318 202-429 (524)
68 3vl1_A 26S proteasome regulato 100.0 1.4E-28 4.7E-33 220.7 20.9 187 112-318 132-366 (420)
69 1sq9_A Antiviral protein SKI8; 100.0 8.1E-28 2.8E-32 214.0 25.0 200 111-325 54-330 (397)
70 1yfq_A Cell cycle arrest prote 100.0 8.3E-28 2.8E-32 209.5 24.2 198 112-334 49-300 (342)
71 3k26_A Polycomb protein EED; W 100.0 9.1E-28 3.1E-32 210.9 23.9 187 111-317 107-366 (366)
72 3ei3_B DNA damage-binding prot 100.0 1.1E-27 3.9E-32 212.3 24.6 204 116-343 115-365 (383)
73 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-27 1E-31 229.2 29.2 208 111-341 47-281 (814)
74 2oaj_A Protein SNI1; WD40 repe 100.0 3.1E-27 1E-31 230.6 29.1 186 114-323 12-248 (902)
75 1yfq_A Cell cycle arrest prote 100.0 3E-27 1E-31 205.9 25.6 209 115-343 7-264 (342)
76 2pm9_A Protein WEB1, protein t 100.0 7.7E-28 2.6E-32 215.3 22.3 210 116-342 64-317 (416)
77 4aez_A CDC20, WD repeat-contai 100.0 2.3E-26 8E-31 205.3 30.7 201 117-343 132-362 (401)
78 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-26 5.6E-31 198.5 28.6 205 111-342 51-278 (313)
79 1sq9_A Antiviral protein SKI8; 100.0 5.4E-27 1.9E-31 208.6 26.4 199 112-326 9-276 (397)
80 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1E-26 3.5E-31 210.7 28.7 206 115-340 98-364 (450)
81 3zwl_B Eukaryotic translation 100.0 3E-26 1E-30 201.3 30.8 208 111-342 66-327 (369)
82 2j04_B YDR362CP, TAU91; beta p 100.0 4.3E-28 1.5E-32 222.5 19.3 210 117-343 131-410 (524)
83 3i2n_A WD repeat-containing pr 100.0 3.1E-27 1.1E-31 206.8 23.7 209 115-343 61-334 (357)
84 3i2n_A WD repeat-containing pr 100.0 5.1E-27 1.7E-31 205.5 24.6 207 111-341 10-270 (357)
85 3gre_A Serine/threonine-protei 100.0 1.6E-27 5.5E-32 215.0 22.0 201 117-328 109-370 (437)
86 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-26 5.1E-31 234.1 30.9 209 111-342 607-894 (1249)
87 1k8k_C P40, ARP2/3 complex 41 100.0 7.8E-27 2.7E-31 205.6 25.1 188 111-317 44-274 (372)
88 4e54_B DNA damage-binding prot 100.0 6.6E-27 2.3E-31 211.1 24.5 210 114-343 159-413 (435)
89 1pgu_A Actin interacting prote 100.0 1.1E-26 3.8E-31 218.0 27.0 204 116-336 15-261 (615)
90 1r5m_A SIR4-interacting protei 100.0 2.6E-26 9E-31 205.5 28.0 218 115-342 41-342 (425)
91 4aez_A CDC20, WD repeat-contai 100.0 9.4E-27 3.2E-31 207.8 24.8 194 111-326 168-389 (401)
92 4h5i_A Guanine nucleotide-exch 100.0 4.9E-27 1.7E-31 207.0 22.2 159 178-343 132-325 (365)
93 2xyi_A Probable histone-bindin 100.0 6.8E-27 2.3E-31 210.7 23.5 221 110-342 119-390 (430)
94 3dw8_B Serine/threonine-protei 100.0 1E-26 3.4E-31 210.1 23.9 212 112-327 74-382 (447)
95 2pm9_A Protein WEB1, protein t 100.0 1.9E-27 6.5E-32 212.8 18.8 200 111-321 105-341 (416)
96 4gq1_A NUP37; propeller, trans 100.0 1.1E-27 3.8E-32 213.3 16.9 208 117-343 87-372 (393)
97 4a11_B DNA excision repair pro 100.0 3.7E-26 1.3E-30 203.6 25.8 209 117-327 97-375 (408)
98 3dwl_C Actin-related protein 2 100.0 2.2E-27 7.4E-32 209.9 17.6 220 75-316 14-280 (377)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.4E-26 1.5E-30 206.5 26.6 205 120-327 5-281 (450)
100 4a11_B DNA excision repair pro 100.0 3.9E-26 1.3E-30 203.4 25.3 201 113-327 37-286 (408)
101 4gq1_A NUP37; propeller, trans 100.0 5.2E-27 1.8E-31 208.9 19.3 180 115-315 132-387 (393)
102 3v7d_B Cell division control p 100.0 2.1E-25 7.1E-30 202.7 30.2 190 111-325 154-389 (464)
103 1pgu_A Actin interacting prote 99.9 1.2E-25 4.2E-30 211.0 28.9 237 74-328 20-294 (615)
104 3jro_A Fusion protein of prote 99.9 1.6E-26 5.5E-31 222.2 21.9 193 111-319 45-287 (753)
105 4gga_A P55CDC, cell division c 99.9 5.2E-25 1.8E-29 197.8 30.3 200 121-343 107-377 (420)
106 1p22_A F-BOX/WD-repeat protein 99.9 1.8E-25 6.2E-30 201.6 27.1 198 111-336 165-393 (435)
107 4ggc_A P55CDC, cell division c 99.9 5.3E-25 1.8E-29 189.7 28.5 197 122-343 28-297 (318)
108 2aq5_A Coronin-1A; WD40 repeat 99.9 4.3E-26 1.5E-30 203.6 22.0 207 121-342 36-279 (402)
109 2xyi_A Probable histone-bindin 99.9 1.9E-25 6.4E-30 201.2 25.7 196 110-318 172-411 (430)
110 1p22_A F-BOX/WD-repeat protein 99.9 3.1E-25 1.1E-29 200.1 26.7 190 116-335 130-343 (435)
111 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.2E-24 4E-29 196.9 27.7 222 111-342 151-419 (445)
112 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.2E-24 4.2E-29 196.7 27.9 193 112-334 111-325 (445)
113 3sfz_A APAF-1, apoptotic pepti 99.9 1.7E-24 5.7E-29 219.2 31.1 184 111-316 649-912 (1249)
114 3lrv_A PRE-mRNA-splicing facto 99.9 5.4E-26 1.9E-30 198.6 15.1 192 126-343 43-273 (343)
115 3vu4_A KMHSV2; beta-propeller 99.9 1.6E-24 5.5E-29 190.2 24.1 198 115-343 15-253 (355)
116 3mmy_A MRNA export factor; mRN 99.9 1.2E-24 4E-29 191.0 22.5 183 113-316 80-345 (368)
117 2j04_A TAU60, YPL007P, hypothe 99.9 2E-24 6.7E-29 194.9 23.1 180 117-342 83-279 (588)
118 2oaj_A Protein SNI1; WD40 repe 99.9 5.2E-24 1.8E-28 207.9 24.5 207 117-328 486-794 (902)
119 3lrv_A PRE-mRNA-splicing facto 99.9 9.1E-24 3.1E-28 184.5 22.8 165 116-319 122-294 (343)
120 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-24 5.2E-29 195.6 15.3 183 117-336 13-234 (588)
121 1l0q_A Surface layer protein; 99.9 6.5E-22 2.2E-26 175.5 31.1 201 114-343 27-256 (391)
122 3bws_A Protein LP49; two-domai 99.9 4.6E-22 1.6E-26 178.9 29.1 202 115-343 165-413 (433)
123 1l0q_A Surface layer protein; 99.9 2.8E-21 9.7E-26 171.4 29.3 186 119-329 73-287 (391)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.4E-21 1.1E-25 172.5 27.2 200 112-340 171-407 (415)
125 3bws_A Protein LP49; two-domai 99.9 3.2E-21 1.1E-25 173.4 25.3 198 119-342 122-356 (433)
126 3vu4_A KMHSV2; beta-propeller 99.9 6.3E-21 2.2E-25 167.3 22.6 170 120-319 59-273 (355)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 8.6E-21 3E-25 170.6 20.0 173 117-318 90-279 (434)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 5.6E-21 1.9E-25 171.9 18.4 198 119-341 36-251 (434)
129 2ojh_A Uncharacterized protein 99.9 3.3E-20 1.1E-24 157.4 21.9 203 114-343 36-284 (297)
130 2w18_A PALB2, fancn, partner a 99.8 7.8E-19 2.7E-23 149.3 24.6 215 122-343 42-339 (356)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.4E-19 4.7E-24 162.0 20.1 202 113-343 111-366 (415)
132 1ri6_A Putative isomerase YBHE 99.8 2.5E-18 8.4E-23 149.3 25.8 210 116-343 34-289 (343)
133 1nir_A Nitrite reductase; hemo 99.8 2.4E-17 8.3E-22 152.2 32.9 200 122-342 181-432 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.8 3.7E-18 1.3E-22 163.9 23.4 201 119-343 36-349 (741)
135 3u4y_A Uncharacterized protein 99.8 1.8E-17 6.2E-22 143.4 24.0 188 115-327 36-264 (331)
136 3vgz_A Uncharacterized protein 99.8 7.2E-17 2.5E-21 140.7 27.0 204 117-343 38-284 (353)
137 3vgz_A Uncharacterized protein 99.8 1.1E-16 3.7E-21 139.6 26.9 198 119-343 88-326 (353)
138 1jmx_B Amine dehydrogenase; ox 99.8 2.6E-17 8.8E-22 143.3 22.2 182 121-328 44-336 (349)
139 1ri6_A Putative isomerase YBHE 99.8 9.9E-17 3.4E-21 139.1 25.5 188 120-326 84-321 (343)
140 1xfd_A DIP, dipeptidyl aminope 99.8 1.7E-18 6E-23 165.7 15.8 204 121-343 18-318 (723)
141 3hfq_A Uncharacterized protein 99.8 1.4E-16 4.8E-21 138.9 26.1 190 115-321 81-323 (347)
142 3hfq_A Uncharacterized protein 99.8 5.9E-17 2E-21 141.3 23.6 209 116-343 36-298 (347)
143 1nir_A Nitrite reductase; hemo 99.8 3.2E-17 1.1E-21 151.4 23.0 205 118-343 220-491 (543)
144 2z3z_A Dipeptidyl aminopeptida 99.8 6.7E-17 2.3E-21 154.4 22.5 220 113-343 114-413 (706)
145 1pby_B Quinohemoprotein amine 99.8 1.7E-17 5.9E-22 143.6 16.3 179 121-328 83-321 (337)
146 2ojh_A Uncharacterized protein 99.7 7.5E-17 2.6E-21 136.6 18.4 182 136-343 17-229 (297)
147 1jmx_B Amine dehydrogenase; ox 99.7 4.5E-16 1.6E-20 135.3 22.7 194 124-343 4-307 (349)
148 2ecf_A Dipeptidyl peptidase IV 99.7 2.8E-16 9.7E-21 150.8 22.5 204 114-343 146-437 (741)
149 2z3z_A Dipeptidyl aminopeptida 99.7 2E-16 6.7E-21 151.1 20.1 199 120-342 82-367 (706)
150 1pby_B Quinohemoprotein amine 99.7 1.3E-15 4.3E-20 131.8 23.1 187 132-343 2-292 (337)
151 3u4y_A Uncharacterized protein 99.7 2.6E-15 8.8E-20 129.8 24.1 194 126-343 4-233 (331)
152 3o4h_A Acylamino-acid-releasin 99.7 2.1E-16 7.3E-21 147.6 18.4 183 119-328 21-237 (582)
153 1xfd_A DIP, dipeptidyl aminope 99.7 2.3E-16 7.8E-21 151.0 18.4 193 113-325 51-355 (723)
154 1k32_A Tricorn protease; prote 99.7 2.9E-16 1E-20 156.2 18.8 209 115-343 241-484 (1045)
155 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-14 5.6E-19 122.3 26.0 204 117-343 27-263 (286)
156 3scy_A Hypothetical bacterial 99.7 4.9E-14 1.7E-18 123.5 28.9 199 116-323 96-345 (361)
157 3scy_A Hypothetical bacterial 99.7 3.9E-14 1.3E-18 124.1 27.7 207 118-343 48-318 (361)
158 1k32_A Tricorn protease; prote 99.7 4.1E-15 1.4E-19 148.0 21.6 203 113-343 197-433 (1045)
159 3fvz_A Peptidyl-glycine alpha- 99.7 3.8E-14 1.3E-18 122.7 25.0 206 119-342 23-303 (329)
160 1z68_A Fibroblast activation p 99.7 6.2E-16 2.1E-20 148.0 14.1 177 124-324 20-298 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.7 4.9E-15 1.7E-19 142.2 19.6 174 121-319 18-296 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.6 3.5E-14 1.2E-18 124.7 21.2 185 118-322 38-297 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.9E-14 6.4E-19 126.5 19.3 180 121-318 84-342 (365)
164 1q7f_A NHL, brain tumor CG1071 99.6 1.5E-13 5E-18 116.4 23.4 181 117-319 74-282 (286)
165 3o4h_A Acylamino-acid-releasin 99.6 8.3E-15 2.8E-19 136.8 17.0 181 114-322 58-279 (582)
166 3pe7_A Oligogalacturonate lyas 99.6 4.1E-14 1.4E-18 125.0 20.6 188 112-320 23-276 (388)
167 2oiz_A Aromatic amine dehydrog 99.6 9.7E-14 3.3E-18 121.7 22.5 202 114-342 46-359 (361)
168 2dg1_A DRP35, lactonase; beta 99.6 3.2E-12 1.1E-16 110.5 28.8 195 114-327 39-272 (333)
169 3e5z_A Putative gluconolactona 99.6 9.3E-13 3.2E-17 112.0 24.3 191 114-329 22-257 (296)
170 1z68_A Fibroblast activation p 99.6 4.1E-14 1.4E-18 135.3 16.9 183 121-326 61-354 (719)
171 2xdw_A Prolyl endopeptidase; a 99.6 7.1E-13 2.4E-17 126.6 24.9 192 117-327 122-378 (710)
172 3no2_A Uncharacterized protein 99.6 1.8E-12 6.2E-17 109.1 23.3 172 130-327 4-205 (276)
173 2bkl_A Prolyl endopeptidase; m 99.5 2.4E-13 8.2E-18 129.6 19.5 192 117-327 118-360 (695)
174 3fvz_A Peptidyl-glycine alpha- 99.5 7.9E-12 2.7E-16 108.1 24.8 182 117-317 88-322 (329)
175 3pe7_A Oligogalacturonate lyas 99.5 1.3E-12 4.3E-17 115.4 19.7 191 115-327 76-338 (388)
176 3azo_A Aminopeptidase; POP fam 99.5 2.2E-12 7.6E-17 122.1 21.4 192 118-326 128-378 (662)
177 2gop_A Trilobed protease; beta 99.5 6.1E-12 2.1E-16 109.3 22.3 174 120-325 59-299 (347)
178 3azo_A Aminopeptidase; POP fam 99.5 6E-12 2E-16 119.2 21.9 194 114-327 18-284 (662)
179 3c5m_A Oligogalacturonate lyas 99.5 3.2E-13 1.1E-17 119.5 12.1 181 120-322 36-278 (396)
180 1rwi_B Serine/threonine-protei 99.4 6.3E-11 2.2E-15 99.0 23.8 177 121-320 25-225 (270)
181 3c5m_A Oligogalacturonate lyas 99.4 1.4E-12 4.8E-17 115.2 13.5 178 123-327 84-338 (396)
182 2z2n_A Virginiamycin B lyase; 99.4 5.4E-10 1.8E-14 94.6 28.4 204 115-342 10-236 (299)
183 1rwi_B Serine/threonine-protei 99.4 4.2E-11 1.4E-15 100.1 19.5 179 118-320 65-267 (270)
184 4a5s_A Dipeptidyl peptidase 4 99.4 3.4E-12 1.2E-16 122.5 14.4 182 115-322 107-358 (740)
185 2xz2_A CSTF-50, isoform B; RNA 99.4 6.1E-13 2.1E-17 80.3 5.7 61 4-65 3-63 (66)
186 1xip_A Nucleoporin NUP159; bet 99.4 3.1E-11 1.1E-15 105.5 18.8 177 121-341 39-224 (388)
187 3no2_A Uncharacterized protein 99.4 5.4E-10 1.8E-14 93.9 24.7 200 115-336 31-271 (276)
188 1xip_A Nucleoporin NUP159; bet 99.4 4.6E-11 1.6E-15 104.4 18.1 138 115-304 84-231 (388)
189 2z2n_A Virginiamycin B lyase; 99.4 3E-09 1E-13 89.9 29.0 185 117-325 54-261 (299)
190 1yr2_A Prolyl oligopeptidase; 99.3 1.4E-10 4.9E-15 111.2 22.8 188 117-326 160-403 (741)
191 3dsm_A Uncharacterized protein 99.3 3.4E-10 1.2E-14 97.7 23.0 177 120-321 44-257 (328)
192 2oiz_A Aromatic amine dehydrog 99.3 2.6E-10 9E-15 99.8 22.5 181 139-343 29-317 (361)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 9.4E-10 3.2E-14 93.9 24.6 206 116-342 14-279 (314)
194 2dg1_A DRP35, lactonase; beta 99.3 7.2E-11 2.5E-15 101.9 17.6 172 120-317 6-213 (333)
195 1qks_A Cytochrome CD1 nitrite 99.3 2.2E-09 7.4E-14 99.2 28.3 190 120-328 197-439 (567)
196 3dsm_A Uncharacterized protein 99.3 2.2E-10 7.7E-15 98.8 18.6 185 118-327 82-311 (328)
197 2qc5_A Streptogramin B lactona 99.3 1E-08 3.5E-13 86.6 28.2 182 117-321 17-221 (300)
198 2mad_H Methylamine dehydrogena 99.3 4.8E-09 1.7E-13 92.0 25.8 71 251-324 275-357 (373)
199 2xdw_A Prolyl endopeptidase; a 99.3 8.6E-10 3E-14 105.3 22.5 180 122-319 173-416 (710)
200 3g4e_A Regucalcin; six bladed 99.2 9.7E-09 3.3E-13 87.2 26.3 191 116-328 9-240 (297)
201 3e5z_A Putative gluconolactona 99.2 2.3E-09 7.8E-14 90.9 22.2 181 114-320 63-289 (296)
202 2qc5_A Streptogramin B lactona 99.2 2.1E-08 7.2E-13 84.7 27.8 202 117-342 59-283 (300)
203 1qks_A Cytochrome CD1 nitrite 99.2 3.8E-09 1.3E-13 97.5 24.0 175 129-326 165-382 (567)
204 3sjl_D Methylamine dehydrogena 99.2 1.9E-09 6.4E-14 93.9 20.3 187 124-331 82-377 (386)
205 2gop_A Trilobed protease; beta 99.2 3.3E-09 1.1E-13 91.9 21.6 174 117-328 102-340 (347)
206 3hrp_A Uncharacterized protein 99.2 1.9E-08 6.6E-13 89.3 25.1 185 120-327 131-363 (409)
207 3c75_H MADH, methylamine dehyd 99.2 2.1E-09 7.3E-14 95.2 18.1 181 124-325 122-410 (426)
208 2bkl_A Prolyl endopeptidase; m 99.1 1.7E-09 6E-14 102.9 18.0 178 123-320 171-400 (695)
209 3iuj_A Prolyl endopeptidase; h 99.1 7.3E-09 2.5E-13 98.6 20.1 183 117-325 126-366 (693)
210 2ghs_A AGR_C_1268P; regucalcin 99.1 1.9E-07 6.3E-12 80.4 26.9 183 121-328 50-270 (326)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 3.8E-08 1.3E-12 83.9 21.6 178 118-317 69-299 (314)
212 2hz6_A Endoplasmic reticulum t 99.0 6E-11 2.1E-15 104.1 3.1 173 130-328 8-203 (369)
213 3g4e_A Regucalcin; six bladed 99.0 1.9E-07 6.7E-12 79.1 24.5 167 118-306 52-261 (297)
214 3dr2_A Exported gluconolactona 99.0 5.4E-08 1.8E-12 82.9 20.3 170 114-309 80-299 (305)
215 3dr2_A Exported gluconolactona 99.0 1.3E-07 4.5E-12 80.5 22.6 190 114-328 39-277 (305)
216 1mda_H Methylamine dehydrogena 99.0 1.9E-08 6.6E-13 87.5 17.0 78 250-330 271-359 (368)
217 2qe8_A Uncharacterized protein 98.9 1.4E-07 4.8E-12 81.7 20.0 178 117-313 64-317 (343)
218 1yr2_A Prolyl oligopeptidase; 98.9 6.2E-08 2.1E-12 92.9 19.4 186 122-325 211-448 (741)
219 3hrp_A Uncharacterized protein 98.9 3.1E-07 1.1E-11 81.5 22.5 174 125-315 176-408 (409)
220 2mad_H Methylamine dehydrogena 98.9 1.6E-06 5.4E-11 76.0 25.6 191 128-343 29-330 (373)
221 3sjl_D Methylamine dehydrogena 98.8 1.4E-07 5E-12 82.1 16.7 171 128-319 41-258 (386)
222 2ece_A 462AA long hypothetical 98.8 1E-06 3.5E-11 77.5 20.5 181 121-326 139-364 (462)
223 2qe8_A Uncharacterized protein 98.8 7.4E-07 2.5E-11 77.2 18.7 168 120-314 17-223 (343)
224 2ghs_A AGR_C_1268P; regucalcin 98.7 7.6E-06 2.6E-10 70.2 23.8 163 118-306 88-291 (326)
225 1npe_A Nidogen, entactin; glyc 98.7 5.1E-05 1.8E-09 62.9 26.8 184 120-327 36-248 (267)
226 2iwa_A Glutamine cyclotransfer 98.7 1.1E-05 3.9E-10 66.4 21.5 168 117-327 16-191 (266)
227 1yiq_A Quinohemoprotein alcoho 98.6 1.3E-06 4.6E-11 82.7 18.1 191 124-327 239-515 (689)
228 2hz6_A Endoplasmic reticulum t 98.6 1.1E-08 3.6E-13 89.8 3.3 126 190-325 8-157 (369)
229 3c75_H MADH, methylamine dehyd 98.6 1.8E-06 6E-11 76.5 16.9 179 141-342 99-381 (426)
230 1mda_H Methylamine dehydrogena 98.6 2.1E-06 7.1E-11 74.7 16.9 178 142-342 47-325 (368)
231 3nol_A Glutamine cyclotransfer 98.6 5.7E-06 1.9E-10 67.5 17.9 164 117-327 38-211 (262)
232 1kb0_A Quinohemoprotein alcoho 98.6 2.6E-06 8.8E-11 80.6 17.4 187 123-328 246-518 (677)
233 3nok_A Glutaminyl cyclase; bet 98.5 1.4E-05 4.7E-10 65.3 17.8 162 120-327 55-220 (268)
234 2ece_A 462AA long hypothetical 98.5 2.8E-05 9.5E-10 68.5 20.8 172 129-318 93-290 (462)
235 1fwx_A Nitrous oxide reductase 98.5 4.1E-06 1.4E-10 76.3 15.0 168 120-329 134-383 (595)
236 2p4o_A Hypothetical protein; p 98.4 0.00028 9.4E-09 59.8 25.5 176 120-320 32-244 (306)
237 3iuj_A Prolyl endopeptidase; h 98.4 1.4E-05 4.8E-10 75.9 19.1 163 118-320 232-408 (693)
238 3mbr_X Glutamine cyclotransfer 98.4 0.00017 5.8E-09 58.3 21.6 165 117-306 16-223 (243)
239 2fp8_A Strictosidine synthase; 98.3 0.00015 5E-09 61.9 21.0 208 115-327 14-278 (322)
240 2p9w_A MAL S 1 allergenic prot 98.3 0.00022 7.6E-09 60.2 20.1 171 115-318 8-216 (334)
241 3qqz_A Putative uncharacterize 98.3 0.0011 3.8E-08 54.2 24.2 180 115-315 22-251 (255)
242 2xe4_A Oligopeptidase B; hydro 98.2 3.2E-05 1.1E-09 74.1 16.1 160 121-317 175-354 (751)
243 1kb0_A Quinohemoprotein alcoho 98.2 3.9E-05 1.3E-09 72.6 16.4 184 130-327 127-476 (677)
244 1kv9_A Type II quinohemoprotei 98.2 3.6E-05 1.2E-09 72.7 16.0 187 123-328 233-499 (668)
245 3mbr_X Glutamine cyclotransfer 98.2 0.00021 7.2E-09 57.8 17.7 152 170-327 10-189 (243)
246 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00027 9.2E-09 61.6 20.0 132 192-326 189-346 (376)
247 1fwx_A Nitrous oxide reductase 98.2 8.4E-05 2.9E-09 67.8 16.7 161 130-318 100-309 (595)
248 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00066 2.3E-08 59.1 22.0 182 130-325 52-266 (376)
249 1yiq_A Quinohemoprotein alcoho 98.2 8.4E-05 2.9E-09 70.5 17.2 133 131-279 121-344 (689)
250 3amr_A 3-phytase; beta-propell 98.1 0.0014 4.6E-08 55.9 22.5 174 130-325 39-272 (355)
251 2iwa_A Glutamine cyclotransfer 98.1 0.00021 7.3E-09 58.8 16.5 154 124-318 70-238 (266)
252 1k3i_A Galactose oxidase precu 98.1 0.00025 8.5E-09 66.9 19.2 74 124-213 190-277 (656)
253 3hxj_A Pyrrolo-quinoline quino 98.0 0.0003 1E-08 59.8 16.6 168 120-318 137-325 (330)
254 3nok_A Glutaminyl cyclase; bet 98.0 0.00034 1.2E-08 57.2 15.6 117 182-326 57-173 (268)
255 3nol_A Glutamine cyclotransfer 98.0 0.00023 7.9E-09 58.1 14.3 127 172-326 34-164 (262)
256 3tc9_A Hypothetical hydrolase; 98.0 0.00074 2.5E-08 60.1 18.8 157 121-317 138-301 (430)
257 1flg_A Protein (quinoprotein e 97.9 0.0011 3.6E-08 61.6 19.9 137 189-328 331-527 (582)
258 3v65_B Low-density lipoprotein 97.9 0.0072 2.5E-07 52.9 24.0 187 118-327 114-328 (386)
259 1npe_A Nidogen, entactin; glyc 97.9 0.0065 2.2E-07 50.0 23.3 159 120-299 79-263 (267)
260 3p5b_L Low density lipoprotein 97.9 0.012 4.1E-07 51.8 26.3 193 117-326 109-329 (400)
261 3hxj_A Pyrrolo-quinoline quino 97.8 0.0011 3.8E-08 56.3 17.0 165 131-327 107-293 (330)
262 3tc9_A Hypothetical hydrolase; 97.8 0.0041 1.4E-07 55.3 20.9 117 118-253 177-300 (430)
263 1w6s_A Methanol dehydrogenase 97.8 0.0023 7.8E-08 59.4 19.7 136 189-327 318-513 (599)
264 3v64_C Agrin; beta propeller, 97.8 0.014 4.6E-07 50.4 26.0 185 119-326 72-284 (349)
265 2ad6_A Methanol dehydrogenase 97.8 0.0018 6.2E-08 59.9 18.6 136 189-328 311-505 (571)
266 4a2l_A BT_4663, two-component 97.7 0.032 1.1E-06 53.7 27.3 183 120-320 310-529 (795)
267 2fp8_A Strictosidine synthase; 97.7 0.0028 9.4E-08 53.9 17.6 166 121-317 127-313 (322)
268 1ijq_A LDL receptor, low-densi 97.7 0.017 5.9E-07 48.9 26.4 190 119-326 29-247 (316)
269 3qqz_A Putative uncharacterize 97.7 0.011 3.6E-07 48.4 19.8 167 174-343 21-236 (255)
270 2p4o_A Hypothetical protein; p 97.7 0.02 6.9E-07 48.1 23.4 168 119-308 71-279 (306)
271 4hw6_A Hypothetical protein, I 97.7 0.0055 1.9E-07 54.5 19.0 158 120-316 139-303 (433)
272 3m0c_C LDL receptor, low-densi 97.6 0.035 1.2E-06 53.2 25.4 192 118-326 422-641 (791)
273 3sov_A LRP-6, low-density lipo 97.6 0.024 8.4E-07 48.0 22.7 185 120-326 35-247 (318)
274 1kv9_A Type II quinohemoprotei 97.6 0.0016 5.6E-08 61.4 15.4 175 131-326 117-342 (668)
275 3kya_A Putative phosphatase; s 97.6 0.016 5.4E-07 52.1 20.6 118 121-252 187-339 (496)
276 4hw6_A Hypothetical protein, I 97.5 0.016 5.5E-07 51.5 19.7 176 120-316 228-432 (433)
277 3kya_A Putative phosphatase; s 97.5 0.0092 3.2E-07 53.6 17.9 159 121-316 140-340 (496)
278 4a2l_A BT_4663, two-component 97.5 0.09 3.1E-06 50.6 29.2 187 119-327 405-623 (795)
279 1k3i_A Galactose oxidase precu 97.5 0.004 1.4E-07 58.7 16.1 55 252-306 465-530 (656)
280 3v64_C Agrin; beta propeller, 97.3 0.062 2.1E-06 46.2 22.8 175 119-318 33-235 (349)
281 3v9f_A Two-component system se 97.3 0.14 4.6E-06 49.3 24.5 181 119-325 406-618 (781)
282 3v9f_A Two-component system se 97.3 0.09 3.1E-06 50.5 23.2 185 119-325 362-575 (781)
283 2xe4_A Oligopeptidase B; hydro 97.2 0.021 7.1E-07 54.7 18.3 161 123-315 224-398 (751)
284 1w6s_A Methanol dehydrogenase 97.1 0.11 3.8E-06 48.1 21.2 63 264-326 278-351 (599)
285 3p5b_L Low density lipoprotein 97.1 0.13 4.4E-06 45.1 24.0 141 178-320 110-280 (400)
286 3pbp_A Nucleoporin NUP82; beta 97.1 0.1 3.4E-06 45.7 19.1 114 181-312 67-207 (452)
287 3s94_A LRP-6, low-density lipo 97.0 0.13 4.3E-06 48.0 21.0 186 118-325 38-251 (619)
288 2xbg_A YCF48-like protein; pho 97.0 0.14 4.8E-06 43.5 20.2 157 117-314 160-319 (327)
289 3m0c_C LDL receptor, low-densi 97.0 0.27 9.1E-06 47.2 22.8 158 178-337 422-609 (791)
290 3pbp_A Nucleoporin NUP82; beta 96.9 0.046 1.6E-06 47.7 15.8 123 121-250 67-208 (452)
291 3v65_B Low-density lipoprotein 96.9 0.17 5.9E-06 44.0 20.8 136 179-318 115-278 (386)
292 2vpj_A Kelch-like protein 12; 96.9 0.097 3.3E-06 43.6 17.9 172 130-320 62-281 (301)
293 2ism_A Putative oxidoreductase 96.9 0.18 6.2E-06 43.3 24.4 107 115-240 26-151 (352)
294 1n7d_A LDL receptor, low-densi 96.8 0.0076 2.6E-07 57.1 10.9 166 122-326 455-623 (699)
295 3ii7_A Kelch-like protein 7; p 96.7 0.22 7.5E-06 41.6 19.1 169 130-320 55-275 (306)
296 2ad6_A Methanol dehydrogenase 96.6 0.051 1.7E-06 50.2 14.9 64 264-327 272-345 (571)
297 1cru_A Protein (soluble quinop 96.6 0.35 1.2E-05 43.1 22.4 116 111-242 18-162 (454)
298 3a9g_A Putative uncharacterize 96.6 0.29 9.9E-06 42.1 24.9 211 113-343 22-324 (354)
299 2xbg_A YCF48-like protein; pho 96.6 0.27 9.3E-06 41.6 21.3 124 177-325 160-286 (327)
300 3sov_A LRP-6, low-density lipo 96.6 0.27 9.3E-06 41.5 19.3 135 181-318 36-198 (318)
301 2xn4_A Kelch-like protein 2; s 96.6 0.11 3.8E-06 43.3 15.5 56 264-321 220-280 (302)
302 1n7d_A LDL receptor, low-densi 96.5 0.011 3.6E-07 56.2 9.2 164 120-318 406-572 (699)
303 1ijq_A LDL receptor, low-densi 96.5 0.33 1.1E-05 40.8 25.1 136 179-317 29-195 (316)
304 1flg_A Protein (quinoprotein e 96.4 0.22 7.4E-06 46.1 17.7 64 264-328 291-366 (582)
305 4a0p_A LRP6, LRP-6, low-densit 96.4 0.65 2.2E-05 43.3 24.3 184 119-326 36-246 (628)
306 2g8s_A Glucose/sorbosone dehyd 96.4 0.42 1.4E-05 41.0 22.9 117 111-240 9-146 (353)
307 3sre_A PON1, serum paraoxonase 96.2 0.53 1.8E-05 40.3 19.4 140 173-317 43-252 (355)
308 2xn4_A Kelch-like protein 2; s 96.1 0.27 9.3E-06 40.9 15.5 55 264-320 173-232 (302)
309 3das_A Putative oxidoreductase 95.8 0.31 1.1E-05 41.6 14.5 67 174-240 26-99 (347)
310 1zgk_A Kelch-like ECH-associat 95.8 0.29 1E-05 40.9 14.4 56 264-321 231-291 (308)
311 3sre_A PON1, serum paraoxonase 95.7 0.85 2.9E-05 39.1 22.3 171 120-307 50-287 (355)
312 2vpj_A Kelch-like protein 12; 95.7 0.72 2.5E-05 38.2 17.5 128 190-321 62-235 (301)
313 3ii7_A Kelch-like protein 7; p 95.7 0.65 2.2E-05 38.6 16.1 127 190-320 55-228 (306)
314 1tl2_A L10, protein (tachylect 95.7 0.58 2E-05 37.0 14.3 67 180-250 41-112 (236)
315 1tl2_A L10, protein (tachylect 95.7 0.13 4.6E-06 40.6 10.4 111 120-247 41-156 (236)
316 1zgk_A Kelch-like ECH-associat 95.6 0.3 1E-05 40.8 13.8 55 264-320 184-243 (308)
317 2xtc_A F-box-like/WD repeat-co 95.4 0.026 9E-07 37.2 4.8 53 17-69 5-62 (90)
318 1uuj_A Platelet-activating fac 95.4 0.015 5.2E-07 38.0 3.5 56 14-69 7-62 (88)
319 4asc_A Kelch repeat and BTB do 95.3 1.1 3.7E-05 37.5 19.7 130 190-323 98-283 (315)
320 1cru_A Protein (soluble quinop 95.2 0.66 2.2E-05 41.4 15.0 65 178-242 25-98 (454)
321 2xzh_A Clathrin heavy chain 1; 94.9 1.5 5.1E-05 37.0 17.9 161 119-319 151-334 (365)
322 2ism_A Putative oxidoreductase 94.8 0.9 3.1E-05 38.9 14.3 61 179-242 30-96 (352)
323 1bpo_A Protein (clathrin); cla 94.8 2 6.8E-05 37.8 22.9 180 125-326 71-298 (494)
324 3ei3_A DNA damage-binding prot 94.7 4.1 0.00014 41.0 23.4 74 119-209 553-635 (1158)
325 3das_A Putative oxidoreductase 94.7 1.8 6.2E-05 36.9 19.3 114 112-241 24-157 (347)
326 2be1_A Serine/threonine-protei 94.5 0.11 3.8E-06 44.2 7.7 120 192-328 11-141 (339)
327 2p9w_A MAL S 1 allergenic prot 94.5 1.9 6.5E-05 36.4 18.6 161 121-317 64-265 (334)
328 4asc_A Kelch repeat and BTB do 94.3 2 6.8E-05 35.8 18.5 66 253-320 148-224 (315)
329 2be1_A Serine/threonine-protei 94.2 2.2 7.7E-05 36.2 15.6 87 191-278 111-236 (339)
330 3a9g_A Putative uncharacterize 94.1 1.1 3.9E-05 38.3 13.3 60 179-242 28-94 (354)
331 2xzh_A Clathrin heavy chain 1; 94.0 2.4 8.3E-05 35.7 24.7 181 125-327 72-300 (365)
332 3s94_A LRP-6, low-density lipo 93.9 4 0.00014 37.9 22.6 177 120-319 349-553 (619)
333 2woz_A Kelch repeat and BTB do 93.9 2.5 8.4E-05 35.3 19.6 130 190-323 109-293 (318)
334 2zwa_A Leucine carboxyl methyl 93.7 1.2 4.1E-05 42.1 13.8 120 189-321 499-639 (695)
335 3amr_A 3-phytase; beta-propell 93.6 3.1 0.0001 35.5 18.3 67 256-325 145-223 (355)
336 2zwa_A Leucine carboxyl methyl 93.3 2.4 8.2E-05 40.0 15.2 110 190-319 451-579 (695)
337 1bpo_A Protein (clathrin); cla 93.1 4.3 0.00015 35.7 20.3 161 119-319 150-333 (494)
338 2uvk_A YJHT; unknown function, 93.1 2.5 8.7E-05 35.8 13.9 59 265-327 286-352 (357)
339 4a0p_A LRP6, LRP-6, low-densit 92.9 6 0.00021 36.8 24.5 183 120-325 340-557 (628)
340 2woz_A Kelch repeat and BTB do 92.8 3.7 0.00013 34.1 17.1 65 253-319 158-233 (318)
341 3ei3_A DNA damage-binding prot 92.7 9.1 0.00031 38.5 25.5 69 255-325 524-599 (1158)
342 2wg3_C Hedgehog-interacting pr 92.4 5.6 0.00019 35.4 15.3 55 180-234 14-79 (463)
343 2g8s_A Glucose/sorbosone dehyd 92.3 3.2 0.00011 35.4 13.3 61 179-241 17-86 (353)
344 2uvk_A YJHT; unknown function, 91.4 2.1 7.1E-05 36.4 11.3 21 130-150 65-95 (357)
345 1xi4_A Clathrin heavy chain; a 91.0 9.9 0.00034 38.9 16.3 175 126-323 72-295 (1630)
346 3sbq_A Nitrous-oxide reductase 90.7 6.4 0.00022 35.9 13.5 117 182-320 325-481 (638)
347 4gq2_M Nucleoporin NUP120; bet 89.5 2.3 8E-05 41.7 10.8 38 288-325 237-274 (950)
348 4gq2_M Nucleoporin NUP120; bet 88.3 6.6 0.00023 38.6 13.1 37 121-157 237-273 (950)
349 4fhn_B Nucleoporin NUP120; pro 87.2 2.2 7.4E-05 42.9 9.1 39 288-326 239-277 (1139)
350 3s25_A Hypothetical 7-bladed b 84.2 17 0.00057 30.2 14.5 120 186-318 59-217 (302)
351 2wg3_C Hedgehog-interacting pr 80.3 31 0.0011 30.6 18.9 116 120-242 14-157 (463)
352 1xi4_A Clathrin heavy chain; a 78.9 64 0.0022 33.4 15.5 66 251-318 267-332 (1630)
353 3sbq_A Nitrous-oxide reductase 78.8 7.3 0.00025 35.5 7.9 65 251-318 331-409 (638)
354 3f7f_A Nucleoporin NUP120; nuc 76.5 4.8 0.00016 37.8 6.4 37 288-326 223-259 (729)
355 3s25_A Hypothetical 7-bladed b 75.9 32 0.0011 28.4 15.1 91 126-243 110-203 (302)
356 3f7f_A Nucleoporin NUP120; nuc 64.2 17 0.00057 34.2 7.0 30 252-281 229-258 (729)
357 4fhn_B Nucleoporin NUP120; pro 63.5 11 0.00038 37.9 6.2 37 181-217 239-275 (1139)
358 4a9v_A PHOX; hydrolase, beta-p 61.5 42 0.0014 30.7 8.9 39 265-304 510-548 (592)
359 3zwu_A Alkaline phosphatase PH 58.2 46 0.0016 30.6 8.8 39 265-304 510-548 (592)
360 3q6k_A 43.2 kDa salivary prote 52.2 1.1E+02 0.0039 26.2 18.8 126 180-305 152-342 (381)
361 3ott_A Two-component system se 52.2 1.6E+02 0.0053 27.8 23.3 172 120-320 63-263 (758)
362 3zwu_A Alkaline phosphatase PH 47.4 62 0.0021 29.7 7.8 59 182-241 478-548 (592)
363 1q47_A Semaphorin 3A; beta pro 46.2 59 0.002 29.1 7.4 69 181-249 405-487 (495)
364 3qhy_B Beta-lactamase inhibito 46.2 1.2E+02 0.004 24.6 14.6 162 121-318 64-247 (282)
365 3al9_A Plexin-A2; beta-propell 45.8 38 0.0013 30.7 6.2 69 181-249 401-476 (539)
366 3mez_B Mannose-specific lectin 45.1 70 0.0024 21.7 8.0 14 291-304 92-105 (113)
367 4a9v_A PHOX; hydrolase, beta-p 44.1 1.1E+02 0.0037 28.0 8.7 61 180-241 476-548 (592)
368 4gz8_A Semaphorin-3A; multi-do 42.7 71 0.0024 29.8 7.5 57 256-312 431-495 (667)
369 4hvt_A Ritya.17583.B, post-pro 42.5 2.2E+02 0.0076 26.8 16.4 32 287-319 350-383 (711)
370 1q47_A Semaphorin 3A; beta pro 42.0 70 0.0024 28.6 7.2 58 255-312 422-487 (495)
371 3fpq_A Serine/threonine-protei 38.6 17 0.0006 29.9 2.6 55 18-72 217-275 (290)
372 3kci_A Probable E3 ubiquitin-p 37.8 1.9E+02 0.0064 24.6 24.8 185 121-317 106-345 (389)
373 3qhy_B Beta-lactamase inhibito 37.4 1.6E+02 0.0056 23.7 13.6 162 121-317 25-207 (282)
374 4asz_A BDNF/NT-3 growth factor 36.0 39 0.0013 27.8 4.4 56 18-73 218-276 (299)
375 4gt4_A Tyrosine-protein kinase 34.8 39 0.0013 28.0 4.2 56 18-73 235-293 (308)
376 4gz8_A Semaphorin-3A; multi-do 34.7 99 0.0034 28.9 7.2 69 181-249 413-495 (667)
377 4b9d_A Serine/threonine-protei 33.7 38 0.0013 28.7 4.0 57 17-73 212-270 (350)
378 3nvq_A Semaphorin-7A; beta-pro 33.4 1.2E+02 0.0041 27.8 7.3 58 193-250 382-445 (590)
379 3al9_A Plexin-A2; beta-propell 33.1 55 0.0019 29.7 5.1 59 254-312 413-476 (539)
380 3nvq_A Semaphorin-7A; beta-pro 32.8 1.3E+02 0.0046 27.5 7.6 58 255-312 381-444 (590)
381 1suu_A DNA gyrase subunit A; t 31.8 2.2E+02 0.0074 23.5 23.9 176 129-316 6-230 (312)
382 4aoj_A High affinity nerve gro 30.2 47 0.0016 27.8 4.0 56 18-73 248-306 (329)
383 3b7f_A Glycosyl hydrolase, BNR 29.7 2.5E+02 0.0087 23.6 16.7 27 180-206 115-143 (394)
384 3ol2_B Plexin-B1; beta-propell 27.8 1.6E+02 0.0056 26.5 7.2 69 181-250 388-462 (528)
385 1olz_A Semaphorin 4D; developm 27.6 1.8E+02 0.0062 27.1 7.7 57 256-312 417-477 (663)
386 2zux_A YESW protein; beta-prop 26.4 3.8E+02 0.013 24.5 18.4 67 274-341 352-424 (591)
387 3omv_A RAF proto-oncogene seri 25.6 50 0.0017 27.3 3.3 56 18-73 225-287 (307)
388 3uc1_A DNA gyrase subunit A; D 24.9 3E+02 0.01 22.9 20.7 174 120-316 95-278 (327)
389 3ott_A Two-component system se 24.7 4.3E+02 0.015 24.7 23.7 119 180-321 373-506 (758)
390 3mez_B Mannose-specific lectin 24.1 1.7E+02 0.0058 19.7 7.8 12 292-303 61-72 (113)
391 4h3o_A Lectin; cadmium, plant 24.1 1.6E+02 0.0056 19.5 8.9 16 290-305 85-100 (105)
392 3no0_A DNA gyrase subunit A; D 23.3 2.9E+02 0.01 22.2 20.7 177 120-316 24-245 (276)
393 3dtc_A Mitogen-activated prote 22.8 89 0.003 24.6 4.3 55 18-72 202-259 (271)
394 3ubd_A Ribosomal protein S6 ki 22.7 78 0.0027 26.1 3.9 55 18-73 214-270 (304)
395 4ase_A Vascular endothelial gr 22.1 67 0.0023 27.2 3.5 56 18-73 275-334 (353)
396 3kmu_A ILK, integrin-linked ki 21.2 94 0.0032 24.4 4.1 55 18-72 199-256 (271)
397 3b7f_A Glycosyl hydrolase, BNR 20.1 3.9E+02 0.013 22.4 16.2 22 179-201 54-77 (394)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-38 Score=283.39 Aligned_cols=302 Identities=23% Similarity=0.352 Sum_probs=183.8
Q ss_pred HHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccccCCCC-CCccchhcccCCCc
Q psy15157 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSI-GLNPIQEILIGPGL 92 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 92 (344)
.+|+.++++++.++|..+|+.+++..++.+.+.............++.+.+.......++..... ......+. +..+.
T Consensus 5 ~~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 83 (410)
T 1vyh_C 5 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEE-FTSGG 83 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCcchhhhhhchhhhhhhheeeHHHHHHHHHHHHHHHHHH-HhccC
Confidence 57899999999999999999999999988875432211111222333322211111000000000 00000000 01110
Q ss_pred eeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceE
Q psy15157 93 DLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVI 172 (344)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (344)
....... +....+.......+.+|.++|++++|+|++.+|++|+.||+|+|||+.+ ....
T Consensus 84 ~~~~~~~--~~~~~~~~~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~------------------~~~~ 143 (410)
T 1vyh_C 84 PLGQKRD--PKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET------------------GDFE 143 (410)
T ss_dssp ----------CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT------------------CCCC
T ss_pred CccccCC--ccccccCCCceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CcEE
Confidence 0000001 1111112223456789999999999999999999999999999999864 3456
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-- 250 (344)
..+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++....+ ..|...|.+++|+|+++++++|+.|+.+++|
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 788999999999999999999999999999999999887654433 4678889999999999999999999999999
Q ss_pred ---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC------------
Q psy15157 251 ---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN------------ 297 (344)
Q Consensus 251 ---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~------------ 297 (344)
++++.++++|+.|+.|++||++++++...+. .|. ..|.+++|+|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHR-HVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECCSCGGGGGGGCCSC
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCC-ceEEEEEEcCcccccchhhhccc
Confidence 5788999999999999999999999888886 344 46999999996
Q ss_pred --------CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 298 --------GKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 298 --------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|.+|++|+.|+.|++||+++++++..+.+|...... +.+++++
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~--v~~~~~g 350 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG--VLFHSGG 350 (410)
T ss_dssp C-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEECSSS
T ss_pred cccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE--EEEcCCC
Confidence 679999999999999999999999999998765444 4445544
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-35 Score=251.88 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=182.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCC------------------------CCCcCCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES------------------------SEPQNDQQ 167 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~------------------------~~~~~~~~ 167 (344)
...+.+|.+.|++++|+|++++|++|+.||+|++||+.+......... ....++..
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 456889999999999999999999999999999999987543222111 01123445
Q ss_pred CCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCE
Q psy15157 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFV 246 (344)
Q Consensus 168 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~ 246 (344)
....+..+.+|.+.|.+++|+|++++|++|+.||+|++||++++.... .....|...|.+++|+| ++.++++|+.|+.
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 567788899999999999999999999999999999999998763321 23356888999999999 6789999999999
Q ss_pred EEEEc--------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 247 LRLYS--------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 247 i~~~~--------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
|++|+ +++.++++|+.|+.|++||+++++++..+. .|. ..|.+++|+|++++
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~h~-~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHM-SNVSFAVFHPTLPI 242 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE-CCS-SCEEEEEECSSSSE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC-CCC-CCEEEEEECCCCCE
Confidence 99992 367899999999999999999999999887 444 46999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
|++|+.||.|++||+++++++..+..+...
T Consensus 243 l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~ 272 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSSTYKVEKTLNVGLER 272 (304)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCSSSS
T ss_pred EEEEcCCCeEEEEECCCCceeeeccCCCcc
Confidence 999999999999999999999999877544
No 3
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-33 Score=244.64 Aligned_cols=212 Identities=18% Similarity=0.275 Sum_probs=180.8
Q ss_pred eeEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+.|++++|+|++ ++|+||+.|++|++|++..... ....++..+.+|...|.+++|+|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-------------~~~~~~~~~~~h~~~v~~~~~s~d 76 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-------------KFGVPVRSFKGHSHIVQDCTLTAD 76 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-------------EEEEEEEEEECCSSCEEEEEECTT
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-------------cccccceEEeCCcccEEEEEECCC
Confidence 45678999999999999965 8999999999999999853210 113456788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------------ 252 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------------ 252 (344)
+.+|++|+.|++|++||+.+++... ....|...|.+++|+|++.++++|+.|+.+++|+.
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQV 154 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEE
Confidence 9999999999999999999886543 33568889999999999999999999999999932
Q ss_pred ----------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 253 ----------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 253 ----------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++..+++++.|+.|++||+++.+....+. .|. ..|++++|+|+|++|++|+.||.|++||+++++++.
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~-~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHN-SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCC-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34589999999999999999999888876 444 479999999999999999999999999999999999
Q ss_pred EeecCCCcCceeeeeeeccCC
Q psy15157 323 AYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+..+. ....+.|++++.
T Consensus 233 ~~~~~~---~v~~~~~sp~~~ 250 (319)
T 3frx_A 233 TLSAQD---EVFSLAFSPNRY 250 (319)
T ss_dssp EEECCS---CEEEEEECSSSS
T ss_pred EecCCC---cEEEEEEcCCCC
Confidence 998754 356667776653
No 4
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-33 Score=239.67 Aligned_cols=207 Identities=29% Similarity=0.468 Sum_probs=182.5
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
......+.+|.+.|++++|+|++++|++|+.||.|++|+..+ ......+.+|...|.+++|+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~------------------~~~~~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD------------------GKFEKTISGHKLGISDVAWS 74 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEC
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC------------------cccchhhccCCCceEEEEEc
Confidence 344567889999999999999999999999999999999853 45567888999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
|++++|++|+.||.|++||+.+++.... ...|...|.+++|+|++.++++|+.|+.+++|
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 152 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 152 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE
Confidence 9999999999999999999998865443 34578889999999999999999999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
++++.++++++.||.|++||+++++.+..+...+. ..+..++|+|++++|++++.||.|++||+++++++..+.
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 68899999999999999999999988877764443 569999999999999999999999999999999999999
Q ss_pred cCCCcCceeee
Q psy15157 326 GAGSMGQQFEL 336 (344)
Q Consensus 326 ~~~~~~~~~~~ 336 (344)
+|.........
T Consensus 232 ~~~~~~~~~~~ 242 (312)
T 4ery_A 232 GHKNEKYCIFA 242 (312)
T ss_dssp SSCCSSSCCCE
T ss_pred ecCCceEEEEE
Confidence 88765444433
No 5
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.2e-33 Score=239.67 Aligned_cols=212 Identities=19% Similarity=0.286 Sum_probs=171.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--C
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--A 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~ 191 (344)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. .....+.++.+|.+.|.+++|+++ +
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~----------------~~~~~~~~l~gH~~~V~~v~~s~~~~g 67 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKFG 67 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCS----------------SCBCCCEEECCCSSCEEEEEECCGGGC
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCC----------------CCcEEEEEEccccCCeEEEEecCCCcC
Confidence 4679999999999999999999999999999999853 123456788999999999999864 7
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEc------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~------------------ 251 (344)
++|+||+.||+|++||+++++.........|...|.+++|+|+ |.+|++++.|+.+++|+
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 8999999999999999988754333444567888999999997 89999999999999983
Q ss_pred -------CC-------------CCEEEEEeCCCcEEEEeCCCCe----EEeeecccCCCccEEEEEEccCC---CEEEEE
Q psy15157 252 -------SD-------------GRIYCSGSKDGDIKIWDGVSSK----CVATFSKAHDGAEISSLTFTRNG---KYLLSS 304 (344)
Q Consensus 252 -------~~-------------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~~---~~l~s~ 304 (344)
|+ +++|++|+.|+.|++||+++++ ....+. .|. ..|.+++|+|++ ++|+++
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~-~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEEE
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCC-CceEEEEECCCCCCceEEEEE
Confidence 22 4689999999999999998765 445554 454 479999999984 899999
Q ss_pred eCCCcEEEEEcCCCe---eEEEeecCCCcCceeeeeeeccCC
Q psy15157 305 GKDSLVKLWELSSAR---CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.|++|++||++++. ....+..+........+.|+++++
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC
Confidence 999999999998753 222332233344566677777664
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-32 Score=240.74 Aligned_cols=212 Identities=19% Similarity=0.357 Sum_probs=183.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++|+.||+|+|||+.+ ...+..+..|...|.+++|+|+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~------------------~~~~~~~~~~~~~v~~~~~s~~ 108 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT------------------TNKVHAIPLRSSWVMTCAYAPS 108 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT------------------CCEEEEEECSSSCEEEEEECTT
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CCcceEeecCCccEEEEEECCC
Confidence 4567899999999999999999999999999999999853 4456778889999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.|+.|++||+.+... ........|...+.++.|++++. +++++.|+.+++|
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 99999999999999999987532 12223456788999999998765 8899999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+|++.++++|+.|+.|++||+++++++..+. .|. ..|++++|+|++++|++|+.||.|++||+++++.+..+.
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-CCc-CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 6789999999999999999999999988886 444 469999999999999999999999999999999998887
Q ss_pred cCCCcCceeeeeeeccCC
Q psy15157 326 GAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~ 343 (344)
.+........+.+++++.
T Consensus 266 ~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 266 HDNIICGITSVSFSKSGR 283 (340)
T ss_dssp CTTCCSCEEEEEECTTSS
T ss_pred cCCcccceEEEEECCCCC
Confidence 655555566777777664
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-33 Score=251.39 Aligned_cols=207 Identities=25% Similarity=0.466 Sum_probs=182.4
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~------------------~~~~~~~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG------------------FECIRTMHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS------------------SCEEECCCCCSSCEEEEEECSSS
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC------------------CceeEEEcCCCCCEEEEEEeCCC
Confidence 456789999999999999999999999999999999853 45677889999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
.+|++|+.|++|++||++++.....+ ..|...|.++.++|++.++++|+.|+.+++|+
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 99999999999999999988655433 46788899999999999999999999999992
Q ss_pred ---CC--------------------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 252 ---SD--------------------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 252 ---~~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
|+ |.++++|+.|+.|++||+++++++..+. .|. ..|++++|+|+|++|++|+.||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~-~~v~~v~~~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHD-NWVRGVLFHSGGKFILSCADDK 360 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-CCS-SCEEEEEECSSSSCEEEEETTT
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE-CCC-CcEEEEEEcCCCCEEEEEeCCC
Confidence 32 6789999999999999999999998887 444 4799999999999999999999
Q ss_pred cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 309 LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|++||+++++++..+.+|.... .++.+++++
T Consensus 361 ~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~ 392 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLNAHEHFV--TSLDFHKTA 392 (410)
T ss_dssp EEEEECCTTSCCCEEEECCSSCE--EEEEECSSS
T ss_pred eEEEEECCCCceEEEEcCCCCcE--EEEEEcCCC
Confidence 99999999999999999887654 445555554
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-33 Score=239.69 Aligned_cols=206 Identities=20% Similarity=0.372 Sum_probs=181.9
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...|.+++|++++.++++|+.|++|++||+.+ ...+..+..|...+.+++|+|+++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~------------------~~~~~~~~~~~~~~~~~~~spdg~ 135 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN------------------GKQIKSIDAGPVDAWTLAFSPDSQ 135 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCTTCCCCEEECTTSS
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CCEEEEEeCCCccEEEEEECCCCC
Confidence 45789999999999999999999999999999999964 455677788889999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
+|++|+.||.|++||+.+++... ....+...+.+++|+|+|++|++|+.|+.+++|
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~--~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEY--SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEE--EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred EEEEEcCCCcEEEEEcCCCceeE--EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence 99999999999999999876543 334567789999999999999999999999998
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
+|++++|++|+.|+.|++||+++++....+. .|. ..|.+++|+|++++|++++.|+.|++||+++++++.++.+|..
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~ 291 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHA-SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD 291 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEc-CCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence 7899999999999999999999999888886 444 4699999999999999999999999999999999999998865
Q ss_pred cCceeeeeeeccC
Q psy15157 330 MGQQFELTLTVDA 342 (344)
Q Consensus 330 ~~~~~~~~~~~~~ 342 (344)
.. ..+.+++++
T Consensus 292 ~v--~~v~~s~~g 302 (321)
T 3ow8_A 292 QV--WGVKYNGNG 302 (321)
T ss_dssp CE--EEEEECTTS
T ss_pred cE--EEEEECCCC
Confidence 54 445555554
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.8e-32 Score=238.73 Aligned_cols=213 Identities=16% Similarity=0.285 Sum_probs=181.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|+||+.||+|+|||..+ ......+..|...|.+++|+|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~------------------~~~~~~~~~~~~~v~~~~~sp~ 117 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT------------------TNKEHAVTMPCTWVMACAYAPS 117 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECSSSCCCEEEECTT
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CCcceEEecCCCCEEEEEECCC
Confidence 4567899999999999999999999999999999999853 3445667788999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc----ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV----RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------- 250 (344)
+..|++|+.|+.+++|++..... ........|...|.+++|+|++..+++++.|+.+++|
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 99999999999999999865321 1223344688899999999999999999999999999
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+++|.++++|+.||.|++||+++++++..+. .|. ..|++++|+|++++|++|+.|++|++||+++++.+
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THE-SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCC-CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 2357899999999999999999999988886 444 46999999999999999999999999999999998
Q ss_pred EEeecCCCcCceeeeeeeccCC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+..+........+.+++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGR 297 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSS
T ss_pred EEEcCCCcccceeEEEEeCCCC
Confidence 8887665544555666666653
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.7e-33 Score=241.20 Aligned_cols=207 Identities=24% Similarity=0.363 Sum_probs=176.5
Q ss_pred EEecCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 114 YVTSHKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.+.+|.+.|++++|+++ +.+|+||+.|++|+||++... .......+.+|...|.+++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~----------------~~~~~~~l~gh~~~v~~~~~~~ 90 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE----------------RLDLQWSLEGHQLGVVSVDISH 90 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEECS
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC----------------CeeeeeeeccCCCCEEEEEECC
Confidence 34689999999999974 679999999999999998531 1233457889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
++.++++++.|++|++||+.+++....+ ..+...+.+++|+|+++++++|+.++.+++|
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSI--DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEE--ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE
Confidence 9999999999999999999988654433 3466678899999999999999999999988
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|+|++|++|+.||.|++||+++++.+..+. .|. ..|.+++|+|++++|++|+.|+.|++||+++++++..+.+
T Consensus 169 ~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHA-MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 246 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccC-CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC
Confidence 6899999999999999999999999998886 444 4699999999999999999999999999999999999998
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|.... ..+.+++++
T Consensus 247 h~~~v--~~~~~sp~~ 260 (321)
T 3ow8_A 247 HASWV--LNVAFCPDD 260 (321)
T ss_dssp CSSCE--EEEEECTTS
T ss_pred CCCce--EEEEECCCC
Confidence 87654 444555554
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=238.92 Aligned_cols=206 Identities=16% Similarity=0.234 Sum_probs=167.9
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
...|...|++++|++++ .|++|+.||+|+|||+.++... ......+.+|.+.|++++|+|++++|
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~--------------~~~~~~~~~H~~~V~~v~~spdg~~l 142 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETL--------------IVSKFCKYEHDDIVSTVSVLSSGTQA 142 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSC--------------EEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCce--------------eEeeccccCCCCCEEEEEECCCCCEE
Confidence 34677899999999985 6889999999999999753111 11233456899999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.||+|++||+.+++.... ...|...|++++|+|++. ++++|+.|+.|++|
T Consensus 143 ~sgs~d~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 143 VSGSKDICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL 220 (344)
T ss_dssp EEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceee
Confidence 9999999999999999865543 356889999999999885 68899999999999
Q ss_pred --cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 --SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 --~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+| +++++++|+.||.|++||+++++++..+. .|. ..|++++|+|++ ++|++|+.|++|+|||+++++++ .+.+
T Consensus 221 ~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~ 297 (344)
T 4gqb_B 221 AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQA 297 (344)
T ss_dssp EECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECC
T ss_pred eecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcC
Confidence 34 56789999999999999999999998887 444 469999999998 57999999999999999998765 5677
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|... ..++.|++++
T Consensus 298 H~~~--V~~v~~sp~~ 311 (344)
T 4gqb_B 298 HRDF--VRDATWSPLN 311 (344)
T ss_dssp CSSC--EEEEEECSSS
T ss_pred CCCC--EEEEEEeCCC
Confidence 7654 4455556554
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=238.70 Aligned_cols=188 Identities=21% Similarity=0.290 Sum_probs=159.1
Q ss_pred eeEEecCCC-ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKS-PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~-~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.+.... .......+|...|.+++|+|+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~---------------~~~~~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI---------------CKSVLSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE---------------EEEEECSSCSSCEEEEEECTT
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce---------------eeeeeccccCCcEEEEEECCC
Confidence 456789988 9999999999999999999999999998632100 012234689999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++|+.|++|++||+..+..........|...|.+++|+|++++|++|+.|+.+++|
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 999999999999999999876543344455688899999999999999999999999998
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+|++.+|++|+.|+.|++||.++++.. ..+. .|. ..|.+++|+|+|++|++|+.|++|++||..
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~-~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLE-GHE-STVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEec-CCC-CceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 578899999999999999999887643 4554 444 479999999999999999999999999974
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=237.46 Aligned_cols=186 Identities=20% Similarity=0.260 Sum_probs=157.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.+ ...+..+.+|.+.|.+++|++++.
T Consensus 121 ~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~------------------~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 121 FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ------------------QVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECSSCT
T ss_pred ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEcCcCCceEEEEecCCCC
Confidence 34568999999999999999999999999999999954 567888999999999999999885
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE--------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~-------------------- 250 (344)
+|++|+.||+|++||+++++....+....+...+.+++|+|+ +.++++|+.|+.|++|
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 789999999999999999876665555556677999999995 5688899999999998
Q ss_pred ---cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCe
Q psy15157 251 ---SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 ---~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|++ ++|++|+.|++|+|||++++++.. +. .|. ..|++++|+|+++ +|++||.|++|++|++.+..
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~-~H~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQ-AHR-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEE-EC-CCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-Ec-CCC-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 6777 579999999999999999998764 33 555 4699999999886 56789999999999997754
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-31 Score=233.80 Aligned_cols=213 Identities=19% Similarity=0.277 Sum_probs=170.8
Q ss_pred ceeEEecCCCceEEEEE-----CC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE
Q psy15157 111 ETAYVTSHKSPCRAGAF-----SI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~-----s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 184 (344)
....+.+|.+.|++++| ++ ++++|+||+.|++|++||+.+.... .........+.+|...|.+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-----------~~~~~~~~~l~~h~~~V~~ 81 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-----------GYFGIPHKALTGHNHFVSD 81 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-----------SBSEEEEEEECCCSSCEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-----------cccccccchhccCCCceEE
Confidence 34568899999999999 76 8999999999999999998642100 0123456788999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC------------
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------ 252 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------ 252 (344)
++|+|++.++++|+.|++|++||+++++.... ...|...|.+++|+|+++++++++.|+.+++|+.
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 99999999999999999999999998865433 3568889999999999999999999999999942
Q ss_pred -------------CC----------CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc
Q psy15157 253 -------------DG----------RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309 (344)
Q Consensus 253 -------------~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~ 309 (344)
++ .++++++.|+.|++|| ...+....+. .|. ..|.+++|+|+|++|++|+.||.
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~-~h~-~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFK-AHE-SNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEE-CCS-SCEEEEEECTTSSEEEEEETTCE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEc-Ccc-ccceEEEECCCCCEEEEEcCCCe
Confidence 22 6899999999999999 4556666665 444 47999999999999999999999
Q ss_pred EEEEEcCC-CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 310 VKLWELSS-ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 310 i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|++||+.+ ......+... . ....+.+++++
T Consensus 237 v~iwd~~~~~~~~~~~~~~-~--~v~~v~~sp~~ 267 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDAG-S--TINQIAFNPKL 267 (343)
T ss_dssp EEEEESSCCSSCSEEEECS-S--CEEEEEECSSS
T ss_pred EEEEECCCCcccceeecCC-C--cEEEEEECCCC
Confidence 99999954 4444454322 2 24455555554
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-31 Score=233.45 Aligned_cols=214 Identities=21% Similarity=0.286 Sum_probs=181.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+..|...|.+++|+|+++++++|+.|+.|++|++.+.. ........+.+|.+.|.++.|+++
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~~~ 154 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE--------------GNVRVSRELAGHTGYLSCCRFLDD 154 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS--------------BSCEEEEEEECCSSCEEEEEEEET
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC--------------CcceeEEEecCCCccEEEEEECCC
Confidence 345678899999999999999999999999999999986421 122456678899999999999987
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+. +++++.|++|++||+.+++.... ...|...|.+++|+|++.++++|+.|+.+++|
T Consensus 155 ~~-l~s~s~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~ 231 (340)
T 1got_B 155 NQ-IVTSSGDTTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231 (340)
T ss_dssp TE-EEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred Cc-EEEEECCCcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEE
Confidence 74 88999999999999998865433 34678899999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+|++.+|++|+.||.|++||+++++.+..+........|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC
Confidence 68999999999999999999999988777653322246999999999999999999999999999999999999998
Q ss_pred CCcCceeeeeeeccCC
Q psy15157 328 GSMGQQFELTLTVDAD 343 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~~ 343 (344)
..... ++.+++++.
T Consensus 312 ~~~v~--~~~~s~dg~ 325 (340)
T 1got_B 312 DNRVS--CLGVTDDGM 325 (340)
T ss_dssp SSCEE--EEEECTTSS
T ss_pred CCcEE--EEEEcCCCC
Confidence 76544 455556543
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-31 Score=250.48 Aligned_cols=224 Identities=19% Similarity=0.350 Sum_probs=178.7
Q ss_pred CCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc
Q psy15157 76 PSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155 (344)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~ 155 (344)
.++.++|.+..++.+........+.. .......+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+
T Consensus 22 ~~~~~spdg~~l~~~~~~~v~l~~~~------~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~----- 90 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCNGTSVYTVPVG------SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ----- 90 (611)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEETT------CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS-----
T ss_pred eEEeeCCCCCEEEeCCCCEEEEecCC------CcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCC-----
Confidence 34566676666555432222222211 1223456789999999999999999999999999999999853
Q ss_pred cCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEE
Q psy15157 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231 (344)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 231 (344)
........+.+|.+.|.+++|+|+++.|++++.+ +.|++||. ++... ....|...|.+++|
T Consensus 91 -----------~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~--~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 91 -----------TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNG--NLTGQARAMNSVDF 155 (611)
T ss_dssp -----------TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCB--CCCCCSSCEEEEEE
T ss_pred -----------CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcc--eecCCCCCceEEEE
Confidence 1233456788999999999999999999998875 47888874 33332 33568889999999
Q ss_pred ecCCC-EEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc-----
Q psy15157 232 HPCGD-YMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK----- 282 (344)
Q Consensus 232 ~~~~~-~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----- 282 (344)
+|++. .|++|+.|+.+++| +|+|++|++|+.|+.|++||..+++.+..+..
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 99987 59999999999998 78999999999999999999999988877743
Q ss_pred -cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 283 -AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 283 -~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.|. ..|.+++|+|+|++|++++.|++|++||+++++++.++..
T Consensus 236 ~~h~-~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 236 VAHS-GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp CSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cccC-CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC
Confidence 454 4799999999999999999999999999999988877653
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-32 Score=242.47 Aligned_cols=213 Identities=15% Similarity=0.290 Sum_probs=176.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|+||+.||+|+|||+.+ ......+..|...|.+++|+|+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 119 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT------------------SQKTHAIKLHCPWVMECAFAPN 119 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT------------------TEEEEEEECCCTTCCCCEECTT
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CccceEEecCCCCEEEEEECCC
Confidence 4567899999999999999999999999999999999853 4566788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCc-----cccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEEc-------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSS-----VRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLYS------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~------------- 251 (344)
+++|++|+.|+.|++||+.+.. ........+|...+.++.|.|+ +..+++|+.|+.+++|+
T Consensus 120 g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~ 199 (380)
T 3iz6_a 120 GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE 199 (380)
T ss_dssp SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence 9999999999999999997532 1112233467788999999997 45799999999999992
Q ss_pred ----------------CCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 252 ----------------SDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 252 ----------------~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+++.++++|+.|+.|++||++. ++.+..+. .|. ..|++++|+|++++|++|+.||+|++||
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHE-GDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCS-SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcC-CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 2678999999999999999984 46666665 454 4699999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCc-----CceeeeeeeccCC
Q psy15157 315 LSSARCLIAYTGAGSM-----GQQFELTLTVDAD 343 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 343 (344)
+++++++..+..+... .....+.|++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR 311 (380)
T ss_dssp TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS
T ss_pred CCCCcEEEEecccccccccccCceEEEEECCCCC
Confidence 9999999998765432 1244566666553
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.5e-31 Score=228.51 Aligned_cols=200 Identities=20% Similarity=0.293 Sum_probs=172.6
Q ss_pred eeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..+|.||.+.|++++|+|+ +++|+|||.|++|+|||+.+.. .....+...+.+|...|.+++|+|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~-------------~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDE-------------TNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSS-------------SCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC-------------cccceeeEEEeCCCCCEEEEEECCC
Confidence 4568999999999999997 6899999999999999996421 1223456788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++|+.|+.|++|+........ ....+...+..+.+++++.++++++.|+.+++|
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~ 175 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTR--RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 175 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEE
T ss_pred CCEEEEEcccccceEEeecccceee--eecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCccc
Confidence 9999999999999999998875433 334456678889999999999999999999999
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+....++++++.|+.|++||+++++.+..+. .|. ..|++++|+|++++|++|+.||.|++||+++++++..+
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~-~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCC-CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 2344678899999999999999999988886 444 47999999999999999999999999999999999999
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
.++.
T Consensus 254 ~~~~ 257 (340)
T 4aow_A 254 DGGD 257 (340)
T ss_dssp ECSS
T ss_pred cCCc
Confidence 8764
No 19
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3e-32 Score=235.64 Aligned_cols=210 Identities=22% Similarity=0.292 Sum_probs=163.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~ 191 (344)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++ ....+..+.+|.+.|.+++|++ ++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~----------------~~~~~~~l~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG----------------GQILIADLRGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT----------------EEEEEEEEECCSSCEEEEEECCGGGS
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC----------------CcEEEEEEcCCCccEEEEEeCCCCCC
Confidence 46799999999999999999999999999999998631 1234677899999999999986 47
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEc------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~------------------ 251 (344)
++|++|+.|++|++||++++..........|...|.+++|+|+ +.+|++|+.|+.+++|+
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 8999999999999999988754334444568889999999998 88999999999999983
Q ss_pred --------CC-----------------CCEEEEEeCCCcEEEEeCCCC---eEEeeecccCCCccEEEEEEccCC----C
Q psy15157 252 --------SD-----------------GRIYCSGSKDGDIKIWDGVSS---KCVATFSKAHDGAEISSLTFTRNG----K 299 (344)
Q Consensus 252 --------~~-----------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~~----~ 299 (344)
|+ +.+|++|+.|+.|++||++.. +.+..+. .|. ..|.+++|+|++ +
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~-~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHS-DWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCS-SCEEEEECCCCSSCSCC
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCC-CceEEEEecCCCCCCCc
Confidence 22 358999999999999999755 4555665 454 479999999986 8
Q ss_pred EEEEEeCCCcEEEEEcCCC---e-eEEEeecCCCcCceeeeeeeccCC
Q psy15157 300 YLLSSGKDSLVKLWELSSA---R-CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+|++++.|++|++||+.+. + ....+.+|. .....+.|++++.
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~ 275 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN--DVVWHVSWSITAN 275 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECS--SCEEEEEECTTTC
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCC--CcEEEEEEcCCCC
Confidence 9999999999999999863 1 123344443 3455666666654
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-31 Score=233.99 Aligned_cols=186 Identities=20% Similarity=0.279 Sum_probs=160.9
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP- 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 192 (344)
...+|.+.|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|++++|++++.
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~------------------~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ------------------KAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEcCCCCCEEEEEEccCCCc
Confidence 4568999999999999999999999999999999853 566788899999999999999875
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE---------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~--------------------- 250 (344)
++++++.||+|++||+++++.........+...+.+++|+|+ +.++++|+.++.|++|
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 889999999999999999876665555566778999999997 5678899999999998
Q ss_pred --cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 251 --SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 251 --~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+|++ ++|++|+.|++|+|||+++++++..+ .|. ..|++++|+| ++++|++++.||+|++||+.+...
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~-~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHR-DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCC-CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 5666 67999999999999999999888765 454 4799999998 899999999999999999976533
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-30 Score=225.34 Aligned_cols=208 Identities=25% Similarity=0.411 Sum_probs=176.4
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|...|.+++|+|++++|++|+.|+.|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS------------------GKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSSS
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC------------------CcEEEEEcCCCCCEEEEEEcCCC
Confidence 445789999999999999999999999999999999963 45677888999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++|+.||.|++||+++++.... ...|...|.+++|+|++.++++++.|+.+++|
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 197 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 197 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEE
T ss_pred CEEEEEeCCCcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEE
Confidence 9999999999999999998765433 34577889999999999999999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCcc-EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|+++++++++.|+.|++||+++++.+..+..+..... +......+++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 198 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 198 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 277 (312)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc
Confidence 68899999999999999999999999888864433222 23333346889999999999999999999999999999
Q ss_pred CCCcCceeeeeeecc
Q psy15157 327 AGSMGQQFELTLTVD 341 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~ 341 (344)
|.... ..+.+.++
T Consensus 278 h~~~v--~~~~~~p~ 290 (312)
T 4ery_A 278 HTDVV--ISTACHPT 290 (312)
T ss_dssp CSSCE--EEEEECSS
T ss_pred cCCcE--EEEeecCc
Confidence 87653 34444444
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-30 Score=227.60 Aligned_cols=216 Identities=19% Similarity=0.256 Sum_probs=181.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+..|...|.+++|+|+|.++++|+.|+.+++|++..... .........+.+|...|.+++|+|++
T Consensus 99 ~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~------------~~~~~~~~~~~~h~~~v~~~~~~~~~ 166 (354)
T 2pbi_B 99 EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN------------ENMAAKKKSVAMHTNYLSACSFTNSD 166 (354)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT------------CCSGGGCEEEEECSSCEEEEEECSSS
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc------------ccccccceeeeccCCcEEEEEEeCCC
Confidence 345678999999999999999999999999999999863210 01123345667899999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------- 250 (344)
..|++++.|++|++||+.+++....+ ..|...|.+++|+| +|.++++|+.|+.+++|
T Consensus 167 ~~l~t~s~D~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 167 MQILTASGDGTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE
Confidence 99999999999999999988655433 46788899999987 57899999999999999
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|++.++++|+.|+.|++||+++++.+..+........+.+++|+|+|++|++|+.|+.|++||+.+++.+..+.+
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~ 324 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 324 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC
Confidence 6889999999999999999999998777665333334689999999999999999999999999999999999998
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
|... ...+.+++++.
T Consensus 325 h~~~--v~~l~~spdg~ 339 (354)
T 2pbi_B 325 HENR--VSTLRVSPDGT 339 (354)
T ss_dssp CSSC--EEEEEECTTSS
T ss_pred CCCc--EEEEEECCCCC
Confidence 8654 45566667654
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-31 Score=227.81 Aligned_cols=199 Identities=22% Similarity=0.348 Sum_probs=157.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cC-CcCCeEEEEEcC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YD-HIEEVTCLEFHP 189 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~ 189 (344)
...+.+|.+.|++++|+++ +||+|+.|++|++||+... .......+ .+ |...|.+++|+|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~----------------~~~~~~~~~~~~h~~~v~~v~~sp 68 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD----------------DFTLIDVLDETAHKKAIRSVAWRP 68 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS----------------CCEEEEEECTTCCCSCEEEEEECT
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC----------------CeEEEEEEecCCccCCEEEEEECC
Confidence 4567899999999999987 9999999999999999631 12334445 34 999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCc-----cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSS-----VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------- 250 (344)
++++|++|+.|++|++||+.... .........|...|.+++|+|+|++|++|+.|+.+++|
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 99999999999999999986431 11122334688899999999999999999999999998
Q ss_pred -------------cCCCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCCCccEEEEEEccC--CCEEEEEeCCCcEEEE
Q psy15157 251 -------------SSDGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHDGAEISSLTFTRN--GKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 -------------~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~vw 313 (344)
+|++.+|++|+.|+.|++||..++ +++..+. .|. ..|.+++|+|+ +.+|++|+.|++|++|
T Consensus 149 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 149 LQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHE-GTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCS-SCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCC-CcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 567889999999999999998876 5666665 454 47999999998 7799999999999999
Q ss_pred EcCCC--------eeEEEeec-CCCc
Q psy15157 314 ELSSA--------RCLIAYTG-AGSM 330 (344)
Q Consensus 314 d~~~~--------~~~~~~~~-~~~~ 330 (344)
|++++ .++..+.+ |...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (330)
T 2hes_X 227 KYMGDDEDDQQEWVCEAILPDVHKRQ 252 (330)
T ss_dssp EEEEECTTSCEEEEEEEECCSCCSSC
T ss_pred EecCCCccccceeEEeeecccccccc
Confidence 99765 45555554 4433
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-31 Score=231.19 Aligned_cols=198 Identities=22% Similarity=0.346 Sum_probs=160.8
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.+. .....+..+.+|...|.+++|+|++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~---------------~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE---------------DEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT---------------SCEEEEEEECCCCSCEEEEEECSSS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC---------------CCeEEEEEecCcCCCeEEEEECCCC
Confidence 4567899999999999999999999999999999999632 1234567788999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
.+|++|+.|++|++||.+++..........|...|.+++|+|+|++|++|+.|+.|++|+
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 999999999999999998775444445567888999999999999999999999999994
Q ss_pred -------------------CCCCEEEEEeCCCcEEEEeCCCCe--------EEeeecccCCCccEEEEEEccCC-CEEEE
Q psy15157 252 -------------------SDGRIYCSGSKDGDIKIWDGVSSK--------CVATFSKAHDGAEISSLTFTRNG-KYLLS 303 (344)
Q Consensus 252 -------------------~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~i~~~~~~-~~l~s 303 (344)
+++..+++++.|+.|++|+...+. ........|. ..|++++|+|++ .+|++
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS-QDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSS-SCEEEEEECSSSTTEEEE
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccccc-CcEeEeEEeCCCceEEEE
Confidence 346679999999999999987542 1112223454 469999999987 59999
Q ss_pred EeCCCcEEEEEcCCCeeEEEee
Q psy15157 304 SGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|+.||.|++|++.+++.+..++
T Consensus 322 ~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 322 CSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp EETTSCEEEEEECC--------
T ss_pred cCCCCcEEEEEecCCCCccccc
Confidence 9999999999999988766554
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-30 Score=225.52 Aligned_cols=208 Identities=23% Similarity=0.354 Sum_probs=178.5
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
......+.+|.+.|++++|+|++++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN------------------GERLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEC
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC------------------chhhhhhhhcCCcEEEEEEc
Confidence 344566899999999999999999999999999999999853 45678889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEE-------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLY------------- 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~------------- 250 (344)
|++++|++++.||.|++||+.+++....+. +...+.+++|+|++.++++++.+ +.+.+|
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 999999999999999999999886654443 67789999999999999999998 888887
Q ss_pred -----------------------cCCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 251 -----------------------SSDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 -----------------------~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+++++++++++.||.|++||+++ ++.+..+. .|. ..|.+++|+|++++|++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHE-KSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCS-SCEEEEEECTTSSEEEEEET
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCC-CceeEEEECCCCCEEEEecC
Confidence 36788999999999999999998 67777776 343 46999999999999999999
Q ss_pred CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 307 DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 307 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
||.|++||+++++.+..+.... ....+.+++++
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDC---PLNTAVITPLK 271 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSS---CEEEEEECSSS
T ss_pred CceEEEEECCCCceeeeecCCC---CceeEEecCCC
Confidence 9999999999999999988432 23344444443
No 26
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-31 Score=241.82 Aligned_cols=198 Identities=17% Similarity=0.244 Sum_probs=163.6
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
...+|...|+||+|+| ++++||+|+.||+|+|||+.+ ........+.+|.+.|++|+|+| ++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~----------------~~~~~~~~~~gH~~~V~~l~f~p~~~ 177 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI----------------KDKPTFIKGIGAGGSITGLKFNPLNT 177 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSC----------------CSCCEEECCCSSSCCCCEEEECSSCT
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC----------------CCceeEEEccCCCCCEEEEEEeCCCC
Confidence 4568999999999999 677999999999999999864 22344556789999999999998 67
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|+||+.||+|++||++++..........+...+.+++|+|++.+|++|+.++.|++|
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEE
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeee
Confidence 89999999999999999875433222222334567889999999999999999999998
Q ss_pred -cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeec--ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 -SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFS--KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 -~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|++. ++++|+.|+.|++||+++.+....+. ..|. ..|++++|+|+|++|++++.||.|++||++++++...+.+
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 45554 78899999999999999876554432 2344 4799999999999999999999999999999998888776
Q ss_pred CC
Q psy15157 327 AG 328 (344)
Q Consensus 327 ~~ 328 (344)
|.
T Consensus 337 ~~ 338 (435)
T 4e54_B 337 HP 338 (435)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-30 Score=222.96 Aligned_cols=208 Identities=20% Similarity=0.342 Sum_probs=177.3
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...+.+|...|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|.+++|+|+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~------------------~~~~~~~~~h~~~v~~~~~~~~ 118 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT------------------GETYQRFVGHKSDVMSVDIDKK 118 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEECTT
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC------------------CCeeEEEccCCCcEEEEEEcCC
Confidence 4556889999999999999999999999999999999964 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC------CCEEEEEeCCCEEEEE--------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC------GDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~~~~i~~~-------------- 250 (344)
+.+|++|+.|++|++||++... ......|...+.+++|+|. +..+++++.|+.+++|
T Consensus 119 ~~~l~s~s~D~~i~vwd~~~~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 119 ASMIISGSRDKTIKVWTIKGQC---LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp SCEEEEEETTSCEEEEETTSCE---EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCEEEEEeCCCeEEEEECCCCe---EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 9999999999999999997532 2344567888999999985 4589999999999998
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|+|++|++|+.||.|++||+.+++.+..+.. + ..|.+++|+|++.+|++++.+ .+++|++..+..+
T Consensus 196 ~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~--~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~ 271 (319)
T 3frx_A 196 NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-Q--DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLV 271 (319)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-C--SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-C--CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeee
Confidence 68999999999999999999999999888863 3 369999999999999988755 5999999998888
Q ss_pred EEeecCC------CcCceeeeeeeccCC
Q psy15157 322 IAYTGAG------SMGQQFELTLTVDAD 343 (344)
Q Consensus 322 ~~~~~~~------~~~~~~~~~~~~~~~ 343 (344)
..+..+. ......++.|++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 272 DDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp EEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred eccCccccccccCcCcceeEEEECCCCC
Confidence 8776542 123456777888764
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-31 Score=230.96 Aligned_cols=213 Identities=20% Similarity=0.295 Sum_probs=176.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-- 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-- 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|+|||+.. ........+.+|.+.|++++|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~----------------~~~~~~~~~~~h~~~v~~~~~~~~~~ 68 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKF 68 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET----------------TEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC----------------CcceeeeEecCCCCcEEEEEeCCCCC
Confidence 35789999999999999999999999999999999952 234567788999999999999987
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------------ 250 (344)
+.+|++|+.||.|++||+.+++.........+...|.+++|+|+ +.++++++.++.+++|
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 89999999999999999998764344444567889999999999 9999999999999998
Q ss_pred -------cC-------------CCCEEEEEeCCCcEEEEeCCCCe----EEeeecccCCCccEEEEEEccC---CCEEEE
Q psy15157 251 -------SS-------------DGRIYCSGSKDGDIKIWDGVSSK----CVATFSKAHDGAEISSLTFTRN---GKYLLS 303 (344)
Q Consensus 251 -------~~-------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~---~~~l~s 303 (344)
+| ++.++++|+.||.|++||++++. ....+. .|. ..|.+++|+|+ +++|++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~-~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-ccc-CcEeEEEECCCCCCCCeEEE
Confidence 45 68999999999999999998764 333443 344 47999999999 899999
Q ss_pred EeCCCcEEEEEcCCCe---eEEEeecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSAR---CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++.||.|++||++++. ....+...........+.+++++.
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 269 (379)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC
Confidence 9999999999999874 333344433445566777777664
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-30 Score=248.64 Aligned_cols=210 Identities=20% Similarity=0.297 Sum_probs=178.0
Q ss_pred eEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+.+|.+.|++++|+++ +++|+||+.|++|++|++.+.. .........+.+|...|.+++|+|++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~-------------~~~~~~~~~~~~h~~~v~~v~~s~~g 442 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD-------------KAYGVAQRRLTGHSHFVEDVVLSSDG 442 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCST-------------TCSCEEEEEEECCSSCEEEEEECTTS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCC-------------cccccccceecCCCCcEEEEEECCCC
Confidence 457899999999999986 4799999999999999986421 11134467789999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
++|++|+.||+|++||+.++.... ....|...|.+++|+|++++|++|+.|+.|++|+
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTR--RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred CEEEEEeCCCcEEEEECCCCccee--EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 999999999999999999876543 3456888999999999999999999999999993
Q ss_pred ------CCC--CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 252 ------SDG--RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 252 ------~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
|++ ..+++|+.|+.|++||++++++...+. .|. ..|++++|+|++++|++|+.||.|++||+++++++..
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~-~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHT-GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCC-CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 333 579999999999999999999888886 444 4799999999999999999999999999999999988
Q ss_pred eecCCCcCceeeeeeeccC
Q psy15157 324 YTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~ 342 (344)
+..+. ....+.+++++
T Consensus 599 ~~~~~---~v~~~~~sp~~ 614 (694)
T 3dm0_A 599 LEANS---VIHALCFSPNR 614 (694)
T ss_dssp CBCSS---CEEEEEECSSS
T ss_pred ecCCC---cEEEEEEcCCC
Confidence 87653 34455666554
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-30 Score=231.25 Aligned_cols=195 Identities=28% Similarity=0.477 Sum_probs=165.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
+...|++++|+|+|++|++|+.|+.|+|||+.+ .+....+.+|...|.+++|+|++..|++|
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 183 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN------------------RKIVMILQGHEQDIYSLDYFPSGDKLVSG 183 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCC------------------CcEEEEEccCCCCEEEEEEcCCCCEEEEe
Confidence 334599999999999999999999999999853 45677889999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE--------------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY-------------------------- 250 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~-------------------------- 250 (344)
+.|++|++||+++++....+ .+...+.+++|+| ++.++++|+.|+.+++|
T Consensus 184 s~d~~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 184 SGDRTVRIWDLRTGQCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp ETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred cCCCcEEEEECCCCeeEEEE---EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 99999999999987654332 3556799999999 89999999999999998
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCe------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSK------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+++|+++++|+.|+.|++||+++.. +...+. .|. ..|.+++|+|++++|++|+.|+.|++||
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHK-DFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE-CCS-SCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-ccc-CcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4678999999999999999987642 333444 344 4699999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcCceee
Q psy15157 315 LSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~ 335 (344)
+++++++..+.+|......+.
T Consensus 339 ~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 339 KKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp TTTCCEEEEEECCSSCEEEEE
T ss_pred CCCCeEEEEECCCCCCEEEEE
Confidence 999999999999976654444
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=225.05 Aligned_cols=190 Identities=21% Similarity=0.353 Sum_probs=150.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+|.+.|++++|+|++++|++|+.|++|+|||+..... ..........+.+|...|.+++|+|++++|++
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~-----------~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD-----------RTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------CCCEEEEEEC----CEEEEEECTTSCEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC-----------ccccceeEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 3999999999999999999999999999999853110 01123567788999999999999999999999
Q ss_pred EeCCCcEEEEEcCCC-ccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 197 GSKDKTVKMFDYSKS-SVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
|+.|++|++||++.. ... .......|...|.+++|+|++.+|++|+.|+.+++|
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 999999999999543 211 122334678899999999999999999999999998
Q ss_pred -cCC--CCEEEEEeCCCcEEEEeCCCC--------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -SSD--GRIYCSGSKDGDIKIWDGVSS--------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -~~~--~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|+ +.++++|+.|+.|++||++.+ .+...+...|. ..|.+++|++++ +|++++.||.|++||..+++
T Consensus 205 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK-RQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS-SCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred ecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc-cceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 344 668999999999999998764 34444443354 579999999765 79999999999999998874
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.9e-30 Score=224.95 Aligned_cols=211 Identities=19% Similarity=0.311 Sum_probs=168.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++.++++|+.|++|++||+.+ ...+..+.+|...|.+++|+|+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~------------------~~~~~~~~~h~~~v~~v~~sp~ 129 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT------------------GTTYKRFVGHQSEVYSVAFSPD 129 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS------------------SCEEEEEECCCSCEEEEEECSS
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC------------------CcEEEEEcCCCCcEEEEEECCC
Confidence 3456789999999999999999999999999999999964 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC----------CEEEEEeCCCEEEEE----------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG----------DYMVVGTDHFVLRLY---------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~~~~i~~~---------- 250 (344)
+++|++|+.|++|++||+.............|...+.+++|+|++ .++++++.|+.+++|
T Consensus 130 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 209 (343)
T 2xzm_R 130 NRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF 209 (343)
T ss_dssp TTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE
T ss_pred CCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE
Confidence 999999999999999999743222212122567789999999987 799999999999998
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|+|++|++|+.||.|++||+.. ......+. . +..|.+++|+|++++++++ .|+.|++||+.+
T Consensus 210 ~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~--~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~ 285 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-A--GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT 285 (343)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-C--SSCEEEEEECSSSCEEEEE-ESSCEEEEESSS
T ss_pred cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-C--CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC
Confidence 68999999999999999999954 33333332 2 2359999999999887655 588899999998
Q ss_pred CeeEE--EeecC---------CCcCceeeeeeeccCC
Q psy15157 318 ARCLI--AYTGA---------GSMGQQFELTLTVDAD 343 (344)
Q Consensus 318 ~~~~~--~~~~~---------~~~~~~~~~~~~~~~~ 343 (344)
++... .+..+ +......++.++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 286 QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 77654 44321 2334456777777764
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-30 Score=243.53 Aligned_cols=204 Identities=29% Similarity=0.492 Sum_probs=174.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...|.||++.|+|++|||||++||+|+.|++|+|||.. .+.+.++.+|.+.|++++|+|+
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-------------------~~~~~~l~gh~~~V~~l~fspd 68 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-------------------GQLLQTLTGHSSSVWGVAFSPD 68 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-------------------SCEEEEEECCSSCEEEEEECTT
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-------------------CCEEEEEeCCCCCEEEEEECCC
Confidence 455689999999999999999999999999999999963 3567889999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++++.|++|++||+. ++.. .....|...|.+++|+|+++++++++.++.+++|
T Consensus 69 g~~las~~~d~~i~vWd~~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 69 GQTIASASDDKTVKLWNRN-GQLL--QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 145 (577)
T ss_dssp SSEEEEEETTSCEEEEETT-SCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECC-CCEE--EEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence 9999999999999999964 4333 3345678899999999999999999999999887
Q ss_pred -------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 251 -------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 251 -------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
++++.++++++.|+.|++||. +++.+..+. .|. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~-~~~-~ 222 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHS-S 222 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-CCS-S
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe-cCC-C
Confidence 578899999999999999995 566676775 344 4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|.+++|+|++++|++++.|+.|++||. +++.+..+.+|..... .+.+++++
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~--~v~~~~d~ 274 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVN--GVAFRPDG 274 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEE--EEEECTTS
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEE--EEEEcCCC
Confidence 6999999999999999999999999996 6788888888865543 34444443
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=3.3e-30 Score=227.21 Aligned_cols=207 Identities=14% Similarity=0.197 Sum_probs=178.3
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..|.++|++++|+|++++|++|+.|+.|++||+.+. .......+.+|...|.+++|+|++++|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~----------------~~~~~~~~~~h~~~v~~~~~~~~~~~l 67 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN----------------KWVQVHELKEHNGQVTGVDWAPDSNRI 67 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT----------------EEEEEEEEECCSSCEEEEEEETTTTEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----------------cEEeeeeecCCCCcccEEEEeCCCCEE
Confidence 4569999999999999999999999999999998631 112677888999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
++++.||.|++||+.+++.........+...|.+++|+|+++++++++.++.+++|
T Consensus 68 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 68 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 99999999999999887655555556678899999999999999999999999987
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeC------------------CCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDG------------------VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~------------------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~ 309 (344)
+|++.++++++.||.|++||+ ..++.+..+. .|. ..|.+++|+|++++|++++.||.
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSC-GWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCS-SCEEEEEECSSSSEEEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCC-CeEEEEEECCCCCEEEEEeCCCE
Confidence 678999999999999999995 3667777776 343 47999999999999999999999
Q ss_pred EEEEEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
|++||+++++++..+.+|...... +.++++
T Consensus 226 i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~ 255 (372)
T 1k8k_C 226 VCLADADKKMAVATLASETLPLLA--VTFITE 255 (372)
T ss_dssp EEEEEGGGTTEEEEEECSSCCEEE--EEEEET
T ss_pred EEEEECCCCceeEEEccCCCCeEE--EEEecC
Confidence 999999999999999988655443 444444
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=8.6e-30 Score=226.93 Aligned_cols=220 Identities=24% Similarity=0.430 Sum_probs=163.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|.+.|+|++|+|+|++||+|+ +++++||++.++..........................+...|.+++|+|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 47999999999999999999986 78999999976433221111000000000000011112344599999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cC-
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SS- 252 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~- 252 (344)
+|+.||.|++||+.+++... ....|...|.+++|+|++.+|++++.|+.+++| +|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVM--ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEcCCCeEEEEECCCCcEEE--EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 99999999999999876543 334688899999999999999999999999999 35
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeec------ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--------
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFS------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-------- 318 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-------- 318 (344)
+++++++|+.|+.|++||+++++.+..+. ..|. ..|.+++|+|+|++|++|+.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK-DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCS-SCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 88999999999999999999998876663 2343 47999999999999999999999999999763
Q ss_pred ----eeEEEeecCCCcCceeeeeeecc
Q psy15157 319 ----RCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 319 ----~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
.+...+.+|.... ..+.++++
T Consensus 297 ~~~~~~~~~~~~h~~~v--~~~~~~~~ 321 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFV--LSVATTQN 321 (393)
T ss_dssp ----CEEEEEECCSSCE--EEEEECGG
T ss_pred CCCCcceEEEecccCcE--EEEEECCC
Confidence 4566777776543 33444443
No 36
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.7e-30 Score=229.16 Aligned_cols=181 Identities=15% Similarity=0.190 Sum_probs=149.6
Q ss_pred cCCCceEEEEECCCCCEEEE--EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCAT--GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~s--g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
.+...+++++|||||+++++ ++.|++|+|||+.+ ...+..+ .|.+.|.+++|+|+++++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~------------------~~~~~~~-~~~~~V~~v~fspdg~~l 191 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD------------------LTEKFEI-ETRGEVKDLHFSTDGKVV 191 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT------------------TEEEEEE-ECSSCCCEEEECTTSSEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC------------------CcEEEEe-CCCCceEEEEEccCCceE
Confidence 45567999999999998765 45799999999964 3344455 377889999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE--------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY-------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~-------------------- 250 (344)
++++. +.+++|+..+++.........+...+.+++|+|++.++++++.++ .++.|
T Consensus 192 ~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 270 (365)
T 4h5i_A 192 AYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK 270 (365)
T ss_dssp EEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS
T ss_pred Eeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC
Confidence 99885 556777777765544344455778899999999999999998776 34444
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+|+|++|++|+.|+.|+|||+++++++..+..+|. ..|++++|+|||++|++||.|++|+|||+...
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~-~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS-FAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS-SCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc-CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999999999999988765676 47999999999999999999999999999643
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.98 E-value=8e-31 Score=230.53 Aligned_cols=210 Identities=15% Similarity=0.178 Sum_probs=162.4
Q ss_pred ecCCCceEEEEECCCCCEEEEEeC------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSV------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..|...|++++|||||++||+|+. |++|++|+..++.. .........+|...|.+++|+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~--------------~~~~~~~~~~~~~~V~~~~~s~ 104 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP--------------NESLCTAGVQTEAGVTDVAWVS 104 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC-----------------CGGGCSEEEECSSCEEEEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc--------------ceeEecccCCCCCCEEEEEEcC
Confidence 579999999999999999999997 77899998754321 1122234456888999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccc--eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKA--HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
++. +++++.||+|++||+.+++.... .....|...|++++|+|++++|++|+.|+.|++|
T Consensus 105 d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~ 183 (357)
T 4g56_B 105 EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE 183 (357)
T ss_dssp TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 975 55678899999999988764433 2334678899999999999999999999999999
Q ss_pred ------cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 ------SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 ------~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++++ .++++++.|+.|++||+++++....+........+.+++|+|+ +.+|++|+.|+.|++||+++++++.
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence 4555 4788999999999999999988776654444457999999997 5688999999999999999999999
Q ss_pred EeecCCCcCceeeeeeeccC
Q psy15157 323 AYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+.+|...... +.|++++
T Consensus 264 ~~~~~~~~v~~--l~~sp~~ 281 (357)
T 4g56_B 264 TSAVHSQNITG--LAYSYHS 281 (357)
T ss_dssp EECCCSSCEEE--EEECSSS
T ss_pred EEeccceeEEE--EEEcCCC
Confidence 99988765444 4455443
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=4.9e-30 Score=227.50 Aligned_cols=197 Identities=15% Similarity=0.175 Sum_probs=165.0
Q ss_pred eEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-C
Q psy15157 113 AYVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-S 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 190 (344)
..+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.+. .........+|...|.+++|+| +
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ----------------NKTSFIQGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST----------------TCEEEECCCSTTCBEEEEEEETTE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc----------------ccceeeecCCcCCceeEEEeCCCC
Confidence 3568999999999999999 99999999999999999642 1122233347999999999999 6
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+.+|++++.|+.|++||+.+...........+...|.+++|+|++.++++|+.++.+++|
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEE
Confidence 789999999999999999864332222222344779999999999999999999999998
Q ss_pred --cCCCC-EEEEEeCCCcEEEEeCCC----CeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 --SSDGR-IYCSGSKDGDIKIWDGVS----SKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 --~~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
+|++. ++++|+.|+.|++||+++ +.++..+ .|. ..|.+++|+| ++++|++++.|+.|++||+++++.+.
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 67788 999999999999999998 5666665 343 4799999999 99999999999999999999999888
Q ss_pred EeecCC
Q psy15157 323 AYTGAG 328 (344)
Q Consensus 323 ~~~~~~ 328 (344)
.+.+|.
T Consensus 288 ~~~~~~ 293 (383)
T 3ei3_B 288 QIIIHP 293 (383)
T ss_dssp EEEECC
T ss_pred cccccc
Confidence 887664
No 39
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=5.2e-30 Score=225.24 Aligned_cols=211 Identities=18% Similarity=0.231 Sum_probs=174.6
Q ss_pred ceeEEecCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSID---GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~---~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ ........+.+|.+.|.+++|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~----------------~~~~~~~~~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD----------------SGQTIPKAQQMHTGPVLDVCW 94 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT----------------TSCEEEEEEEECSSCEEEEEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC----------------CCceeEEEeccccCCEEEEEE
Confidence 44567899999999999998 69999999999999999963 123344778899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEE--ecCCCEEEEEeCCCEEEEEcCC------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF--HPCGDYMVVGTDHFVLRLYSSD------------ 253 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~i~~~~~~------------ 253 (344)
+|++++|++++.||.|++||+.+++.. ....|...|.+++| +|++.++++++.|+.+++|+..
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred CcCCCEEEEEcCCCcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999987643 34568889999999 8999999999999999999421
Q ss_pred --------------------------------------------------------CCEEEEEeCCCcEEEEeCCCC---
Q psy15157 254 --------------------------------------------------------GRIYCSGSKDGDIKIWDGVSS--- 274 (344)
Q Consensus 254 --------------------------------------------------------~~~l~~~~~dg~i~iwd~~~~--- 274 (344)
...+++++.||.|++||++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 112889999999999999887
Q ss_pred eEEeeecccCCC-----------ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 275 KCVATFSKAHDG-----------AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 275 ~~~~~~~~~~~~-----------~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+..+.. |.. ..|++++|+|++++|++++.||.|++||+.+++++..+.+|... ...+.+++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~~~~s~~g~ 328 (368)
T 3mmy_A 252 KDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP--ISACCFNHNGN 328 (368)
T ss_dssp HHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC--EEEEEECTTSS
T ss_pred ccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC--ceEEEECCCCC
Confidence 34444442 221 15999999999999999999999999999999999999987654 45556666654
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.4e-31 Score=236.75 Aligned_cols=207 Identities=17% Similarity=0.257 Sum_probs=168.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..|.++|++++|+|++++|++|+.|+.|+|||+.+. .......+.+|...|.+++|+|++++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~----------------~~~~~~~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN----------------GWKHARTFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT----------------EEEECCCBCCCSSCEEEEEECTTTCCE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC----------------ceEEEEEEecCCceEEEEEEeCCCCEE
Confidence 4557889999999999999999999999999999632 014456778899999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCc-cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.||+|++||+.++. .........|...|.+++|+|++++|++++.|+.+++|
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 999999999999999876 33334445688899999999999999999999999987
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCC------------------CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGV------------------SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
+|+++++++++.|+.|++||+. .++++..+ .|. ..|.+++|+|++++|++++.||
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSG-GWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCS-SSEEEEEECTTSSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCC-ceEEEEEECCCCCEEEEEeCCC
Confidence 6788999999999999999985 34555555 444 4799999999999999999999
Q ss_pred cEEEEEcCCCee----EEEeecCCCcCceeeeeeeccC
Q psy15157 309 LVKLWELSSARC----LIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|++||++++++ +..+.+|..... .+.+++++
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~~ 263 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLR--SLLWANES 263 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEE--EEEEEETT
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceE--EEEEcCCC
Confidence 999999999987 788888876544 44445543
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.3e-29 Score=219.06 Aligned_cols=190 Identities=19% Similarity=0.296 Sum_probs=160.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--C
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--S 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~ 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+.. ........+.+|...|.+++|+| +
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~d 70 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT--------------SNWELSDSWRAHDSSIVAIDWASPEY 70 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS--------------CCEEEEEEEECCSSCEEEEEECCGGG
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC--------------CcceecceeccCCCcEEEEEEcCCCC
Confidence 3578999999999999999999999999999999996421 11245677889999999999999 5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc-------ccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEcC---------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV-------RKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYSS--------- 252 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~~--------- 252 (344)
+.+|++|+.||.|++||++++.. ........+...|.+++|+|+ +.++++++.|+.+++|+.
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 89999999999999999988642 112334457889999999999 999999999999999942
Q ss_pred ------------------------------CCCEEEEEeCCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCC--
Q psy15157 253 ------------------------------DGRIYCSGSKDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNG-- 298 (344)
Q Consensus 253 ------------------------------~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~-- 298 (344)
++.++++++.|+.+.+|+...++. +..+. .|. ..|++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHK-SLIRSISWAPSIGR 228 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCC-SCEEEEEECCCSSC
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCC-cceeEEEECCCCCC
Confidence 388999999999999888887765 44444 344 479999999998
Q ss_pred --CEEEEEeCCCcEEEEEcCCC
Q psy15157 299 --KYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 299 --~~l~s~~~dg~i~vwd~~~~ 318 (344)
++|++|+.||.|++||++++
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEEC
T ss_pred cceEEEEEcCCCeEEEEeCCCC
Confidence 89999999999999999875
No 42
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=7.7e-30 Score=239.89 Aligned_cols=196 Identities=16% Similarity=0.256 Sum_probs=169.5
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+|...|++++|+|++. .|++|+.|++|++||..+ .+...++.+|...|.+++|+|+++
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~------------------~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP------------------FKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT------------------BEEEEEECCCSSCEEEEEECTTSS
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC------------------CeEeeeeccccCceEEEEECCCCC
Confidence 4679999999999999987 699999999999999753 456778899999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceee-----eccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKT-----IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------- 252 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------- 252 (344)
+|++|+.|++|++||+.+++....+.. ..|...|.+++|+|+|++|++++.|+.+++|+.
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 999999999999999988765443321 158889999999999999999999999999954
Q ss_pred ---------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 253 ---------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 253 ---------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
++..+++++.|+.|++||...++....+. +|. ..|++++|+|+|++|++++.|+.|++||+.++++...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~-gh~-~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY-GHN-KAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc-CCC-CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 34568899999999999999988777665 454 4799999999999999999999999999999988776
Q ss_pred e-ecCCC
Q psy15157 324 Y-TGAGS 329 (344)
Q Consensus 324 ~-~~~~~ 329 (344)
+ .+|..
T Consensus 362 ~~~~h~~ 368 (611)
T 1nr0_A 362 FPDVHAT 368 (611)
T ss_dssp SSCSCSS
T ss_pred cccCCcc
Confidence 6 34443
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=2.1e-30 Score=229.84 Aligned_cols=248 Identities=19% Similarity=0.311 Sum_probs=190.9
Q ss_pred CCCCccchhcccCCCceeeec-CCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc
Q psy15157 77 SIGLNPIQEILIGPGLDLEFE-SDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155 (344)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~ 155 (344)
++.+.|....+++++.+-... .+.. .......+.+|...|.+++|+|+|++|++|+.|+.|++|++.+....
T Consensus 71 ~~~~sp~~~~l~s~s~D~~v~iWd~~------~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~- 143 (380)
T 3iz6_a 71 SLDWTPEKNWIVSASQDGRLIVWNAL------TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR- 143 (380)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETT------TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC-
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECC------CCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc-
Confidence 445566666666655432211 1111 12235567899999999999999999999999999999998642110
Q ss_pred cCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCccccceee---eccccceEEEEE
Q psy15157 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILASGSKDKTVKMFDYSKSSVRKAHKT---IQESTFVRCLSF 231 (344)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~ 231 (344)
.........+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++....+.. ..|...|.+++|
T Consensus 144 ----------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 144 ----------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp ----------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred ----------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 11223345678999999999999975 4799999999999999999875543321 357788999999
Q ss_pred ec-CCCEEEEEeCCCEEEEE------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC-
Q psy15157 232 HP-CGDYMVVGTDHFVLRLY------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD- 285 (344)
Q Consensus 232 ~~-~~~~l~~~~~~~~i~~~------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~- 285 (344)
++ ++.++++|+.|+.+++| +|++.+|++|+.||.|++||+++++.+..+.....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 293 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR 293 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc
Confidence 87 88999999999999999 68899999999999999999999998877653221
Q ss_pred ----CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe----ecCCCcCceeeeeeeccCC
Q psy15157 286 ----GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY----TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 ----~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 343 (344)
...|++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.. ...++.+++++.
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~--~v~~l~~s~dg~ 357 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG--RISCLGLSSDGS 357 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC--CCCEEEECSSSS
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC--ceEEEEECCCCC
Confidence 124899999999999999999999999999999998887 34443 445556666653
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.6e-29 Score=216.64 Aligned_cols=189 Identities=19% Similarity=0.277 Sum_probs=155.6
Q ss_pred eeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 112 TAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
...+.+|.+.|++++|++ ++++|++|+.|++|+|||+.++ ....+..+.+|...|.+++|+|
T Consensus 46 ~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~----------------~~~~~~~~~~h~~~v~~v~~~p 109 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG----------------RWSQIAVHAVHSASVNSVQWAP 109 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS----------------CBCCCEEECCCSSCEEEEEECC
T ss_pred EEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC----------------ceEEEEEeecCCCceeEEEeCc
Confidence 456789999999999986 4899999999999999999642 1223456788999999999999
Q ss_pred C--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-------------CCEEEEEeCCCEEEEE----
Q psy15157 190 S--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-------------GDYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 190 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~~~~i~~~---- 250 (344)
+ +.+|++|+.||+|++||++++..........|...|.+++|+|+ +++|++|+.|+.|++|
T Consensus 110 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 110 HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 7 78999999999999999987643333444568889999999997 5799999999999998
Q ss_pred -----------------------cCC---CCEEEEEeCCCcEEEEeCCCCe---EEeeec-ccCCCccEEEEEEccCCCE
Q psy15157 251 -----------------------SSD---GRIYCSGSKDGDIKIWDGVSSK---CVATFS-KAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 -----------------------~~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~~~-~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.+|++++.|++|++||+++.. ....+. ..+. ..|.+++|+|+|++
T Consensus 190 ~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 190 DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP-DVLWRASWSLSGNV 268 (297)
T ss_dssp TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS-SCEEEEEECSSSCC
T ss_pred CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCC-CcEEEEEECCCCCE
Confidence 455 4789999999999999987642 112221 2333 57999999999999
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy15157 301 LLSSGKDSLVKLWELSS 317 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~ 317 (344)
|++++.|+.|++|+...
T Consensus 269 las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 269 LALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEETTSCEEEEEECT
T ss_pred EEEEcCCCcEEEEEECC
Confidence 99999999999999863
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4e-30 Score=229.67 Aligned_cols=218 Identities=16% Similarity=0.216 Sum_probs=175.9
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
.+.+|.+.|++++|+| ++++|++|+.||+|+|||+.+..... .....+..+.+|...|.+++|+|++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~p~~~ 144 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL-----------PLREPVITLEGHTKRVGIVAWHPTAQ 144 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS-----------CBCSCSEEEECCSSCEEEEEECSSBT
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc-----------ccCCceEEecCCCCeEEEEEECcCCC
Confidence 4679999999999999 99999999999999999997531110 1114466788999999999999998
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|++|+.||.|++||+++++....+....|...|.+++|+|++.+|++++.|+.+++|
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 69999999999999999988654433214578899999999999999999999999998
Q ss_pred ----cCCCCEEEEE---eCCCcEEEEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCee-
Q psy15157 251 ----SSDGRIYCSG---SKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELSSARC- 320 (344)
Q Consensus 251 ----~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~~~~~- 320 (344)
++++.++++| +.|+.|++||+++++. +......+. ..+.+++|+|++++|++ |+.||.|++||+.+++.
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS-SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC-SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC-CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 5778889998 7999999999998764 223322333 46999999999999975 55799999999999884
Q ss_pred EEEeecCCCcCceeeeeeeccCC
Q psy15157 321 LIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+..+........+.+++++.
T Consensus 304 ~~~l~~~~~~~~v~~~~~sp~~~ 326 (402)
T 2aq5_A 304 LHYLSMFSSKESQRGMGYMPKRG 326 (402)
T ss_dssp EEEEEEECCSSCCSEEEECCGGG
T ss_pred eEeecccccCCcccceEEecccc
Confidence 66676665555666677776653
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=5.5e-29 Score=232.34 Aligned_cols=205 Identities=27% Similarity=0.469 Sum_probs=177.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...+.+|...|++++|+|+++++++|+.||.|++||.. ...+..+.+|...|.+++|+|+
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-------------------~~~~~~~~~~~~~v~~~~~s~d 396 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-------------------GQLLQTLTGHSSSVRGVAFSPD 396 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------------------CCEEEEEECCSSCEEEEEECTT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-------------------CCEEEEecCCCCCeEEEEECCC
Confidence 345578999999999999999999999999999999964 3457788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++++.|+.|++||.. ++.. .....|...|++++|+|+++++++++.|+.+++|
T Consensus 397 g~~l~~~~~d~~v~~~~~~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 397 GQTIASASDDKTVKLWNRN-GQLL--QTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV 473 (577)
T ss_dssp SSCEEEEETTSEEEEECTT-CCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEeCC-CCEE--EEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEE
Confidence 9999999999999999964 3332 2335678899999999999999999999999998
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+|+++++++++.|+.|++||. +++++..+. .|. ..|++++|+|+|++|++++.||.|++||. +++++..+.+|.
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~-~h~-~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHS-SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEET-TSCEEEEEE-CCS-SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe-CCC-CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 789999999999999999994 677888886 444 46999999999999999999999999996 789999999987
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
... ..+.|++|++
T Consensus 550 ~~v--~~~~fs~dg~ 562 (577)
T 2ymu_A 550 SSV--WGVAFSPDGQ 562 (577)
T ss_dssp SCE--EEEEECTTSS
T ss_pred CCE--EEEEEcCCCC
Confidence 554 4556677764
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=3.3e-28 Score=211.23 Aligned_cols=203 Identities=16% Similarity=0.278 Sum_probs=171.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|...|++++|+|+++++++++.||.|++||+.+. .......+..|...|.+++|+|++++|+
T Consensus 94 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 157 (337)
T 1gxr_A 94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP----------------TPRIKAELTSSAPACYALAISPDSKVCF 157 (337)
T ss_dssp SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC------------------EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC----------------CcceeeecccCCCceEEEEECCCCCEEE
Confidence 389999999999999999999999999999999642 2235667788999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~ 253 (344)
+++.||.|++||+++++....+ ..+...+.+++|+|+++++++++.++.+++| +|+
T Consensus 158 ~~~~dg~v~~~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCceeeee--ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 9999999999999987654333 3477889999999999999999999999998 689
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
++++++++.|+.|++||+++++... +. .|. ..|.+++|+|++++|++++.||.|++||+.+++.+...... ...
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~~-~~-~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~---~~v 309 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKYQ-LH-LHE-SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES---SSV 309 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEEE-EC-CCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS---SCE
T ss_pred CCEEEEEcCCCcEEEEECCCCCeEE-Ec-CCc-cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC---CcE
Confidence 9999999999999999999887653 33 343 47999999999999999999999999999999988665432 234
Q ss_pred eeeeeeccC
Q psy15157 334 FELTLTVDA 342 (344)
Q Consensus 334 ~~~~~~~~~ 342 (344)
..+.+++++
T Consensus 310 ~~~~~s~~~ 318 (337)
T 1gxr_A 310 LSCDISVDD 318 (337)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 455555554
No 48
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=7.4e-29 Score=236.65 Aligned_cols=195 Identities=23% Similarity=0.391 Sum_probs=167.2
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++++|++|+.||+|+|||+.+ ......+.+|...|.+++|+|+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 483 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA------------------GVSTRRFVGHTKDVLSVAFSLD 483 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEECTT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CcceeEEeCCCCCEEEEEEeCC
Confidence 3456789999999999999999999999999999999953 4566788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce-eeeccccceEEEEEecCC--CEEEEEeCCCEEEEE-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH-KTIQESTFVRCLSFHPCG--DYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~i~~~----------------- 250 (344)
+++|+||+.|++|++||.......... ....|...|.+++|+|++ ..+++++.|+.|++|
T Consensus 484 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~ 563 (694)
T 3dm0_A 484 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY 563 (694)
T ss_dssp SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 999999999999999998654221111 113467789999999986 689999999999998
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+|+++++++|+.||.|++||+++++.+..+.. + ..|.+++|+|++.+|++++ |+.|++||+++++.+..+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~--~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-N--SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-S--SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-C--CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 78999999999999999999999998887752 2 3699999999999887776 566999999999999888
Q ss_pred ecC
Q psy15157 325 TGA 327 (344)
Q Consensus 325 ~~~ 327 (344)
..+
T Consensus 640 ~~~ 642 (694)
T 3dm0_A 640 KVD 642 (694)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.6e-29 Score=220.74 Aligned_cols=207 Identities=17% Similarity=0.242 Sum_probs=174.8
Q ss_pred cCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 117 SHKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
.|...|++++|+|+ +++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+| ++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~ 128 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT------------------MQCIKHYVGHGNAINELKFHPRDP 128 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT------------------CCEEEEEESCCSCEEEEEECSSCT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh------------------ceEeeeecCCCCcEEEEEECCCCC
Confidence 37788999999998 67999999999999999853 456778889999999999999 89
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceee-eccccceEEEEEecCCCEEEEEeCCCEEEEEcCC-----------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD----------------- 253 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~----------------- 253 (344)
.+|++|+.||.|++||+++++....+.. ..+...|.+++|+|++.++++++.|+.+++|+..
T Consensus 129 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 129 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCC
Confidence 9999999999999999998765443321 3578899999999999999999999999999433
Q ss_pred --------------------------------CCEEEEEeCCCcEEEEeCCCCeE--------------EeeecccCCCc
Q psy15157 254 --------------------------------GRIYCSGSKDGDIKIWDGVSSKC--------------VATFSKAHDGA 287 (344)
Q Consensus 254 --------------------------------~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~ 287 (344)
+.++++++.|+.|++||++++.. +..+. .|. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 286 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQ-C 286 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSS-C
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccC-C
Confidence 78999999999999999887643 44554 333 4
Q ss_pred cEEEEEEccC--CCEEEEEeCCCcEEEEEcCCCe----eEEEeecCCCcCceeeeeeeccCC
Q psy15157 288 EISSLTFTRN--GKYLLSSGKDSLVKLWELSSAR----CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 288 ~v~~i~~~~~--~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|.+++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|........+.+++++.
T Consensus 287 ~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 287 DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS
T ss_pred cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC
Confidence 6899999999 9999999999999999999986 445788886666777778877764
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=5.8e-28 Score=209.70 Aligned_cols=212 Identities=15% Similarity=0.188 Sum_probs=172.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.....+|.+.|++++|+|+++++++++ ||.|++||+.+.... ..........|...|.+++|+|++
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~ 109 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-------------SPVSQLDCLNRDNYIRSCKLLPDG 109 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-------------SCSEEEECSCTTSBEEEEEECTTS
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce-------------eeeecccccCCCCcEEEEEEcCCC
Confidence 334458999999999999999999999 999999999753111 011122334799999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++++.||.|++||+.+++.........+...+.+++|+|+++++++++.++.+++|
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~ 189 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEE
Confidence 99999999999999999987644444555677889999999999999999999999998
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+|++.++++++.||.|++||+++++.+..+. +. ..+.+++|+|++++|++++.|+.|++||+++++.. .+..|.
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~-~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~ 265 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FT-SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHE 265 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CS-SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCS
T ss_pred EECCCCCEEEEEecCCcEEEEECCCCceEeeec--CC-CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCc
Confidence 6889999999999999999999999887774 22 46999999999999999999999999999988764 455554
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
.. ...+.++++++
T Consensus 266 ~~--v~~~~~~~~~~ 278 (337)
T 1gxr_A 266 SC--VLSLKFAYCGK 278 (337)
T ss_dssp SC--EEEEEECTTSS
T ss_pred cc--eeEEEECCCCC
Confidence 43 44555555543
No 51
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=9.5e-29 Score=215.17 Aligned_cols=240 Identities=19% Similarity=0.314 Sum_probs=174.3
Q ss_pred CCCCCCccch-hcccCCCceeeec-CCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcc
Q psy15157 75 EPSIGLNPIQ-EILIGPGLDLEFE-SDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRML 152 (344)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~ 152 (344)
+.++.+.|.. ..+++++.|-... .+.. ............+.+|...|++++|+|++++|++|+.|+.|++|+.....
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~-~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLT-RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 119 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEEC-CSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECC-CCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc
Confidence 3455666653 4565555432211 1111 11112233456788999999999999999999999999999999997543
Q ss_pred ccccCCCC------------------------CCcCCC-CCCceEEEecCCcCCeEEEEEcCCC--CEEEEEeCCCcEEE
Q psy15157 153 AKSSMESS------------------------EPQNDQ-QGHPVIRTLYDHIEEVTCLEFHPSA--PILASGSKDKTVKM 205 (344)
Q Consensus 153 ~~~~~~~~------------------------~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~i 205 (344)
........ ...++. ..........+|...+.+++|++++ .++++++.|+.|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 120 TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 22111100 001111 1223344567899999999999865 47899999999999
Q ss_pred EEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCC
Q psy15157 206 FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKD 263 (344)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~d 263 (344)
||+++++.... ...|...|++++|+|++++|++|+.|+.+++| +|++. +++++.|
T Consensus 200 ~d~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d 276 (340)
T 4aow_A 200 WNLANCKLKTN--HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATG 276 (340)
T ss_dssp EETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEET
T ss_pred EECCCCceeeE--ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCC
Confidence 99998765433 34678899999999999999999999999999 45554 4567789
Q ss_pred CcEEEEeCCCCeEEeeecc--------cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 264 GDIKIWDGVSSKCVATFSK--------AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+.|++||++++..+..+.. .|. ..|++++|+|+|++|++|+.||.|+|||+++|+
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEP-PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC-------CCC-CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CEEEEEECCCCeEEEeccccceeeeccCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999999999887766542 233 469999999999999999999999999999985
No 52
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=240.66 Aligned_cols=213 Identities=20% Similarity=0.294 Sum_probs=170.9
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-- 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-- 190 (344)
.++.+|.+.|++++|+|++++|++|+.||.|+|||+.+ ........+.+|.+.|++++|+|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~----------------~~~~~~~~l~~h~~~V~~l~~s~~~~ 66 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKF 66 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET----------------TEEEEEEEECCCSSCEEEEEECCTTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC----------------CCCccceeccCCcCceEEEEecCCCC
Confidence 35689999999999999999999999999999999852 234567788999999999999988
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.||.|++||+.+++.........|...|.+++|+|+ +.++++|+.|+.+++|
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 89999999999999999998764444555668889999999999 9999999999999998
Q ss_pred -------cC-------------CCCEEEEEeCCCcEEEEeCCCC----eEEeeecccCCCccEEEEEEccC---CCEEEE
Q psy15157 251 -------SS-------------DGRIYCSGSKDGDIKIWDGVSS----KCVATFSKAHDGAEISSLTFTRN---GKYLLS 303 (344)
Q Consensus 251 -------~~-------------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~v~~i~~~~~---~~~l~s 303 (344)
+| ++.++++|+.||.|++||++++ .....+. .|. ..|++++|+|+ +++|++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~-~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCC-CcEEEEEeccCCCCCCEEEE
Confidence 34 5889999999999999999877 4444554 444 47999999999 999999
Q ss_pred EeCCCcEEEEEcCCCeeE---EEeecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSARCL---IAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.||.|++||+++++.. ..+...........+.+++++.
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 267 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC
Confidence 999999999999987421 1122222333445556666553
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=3.6e-28 Score=217.97 Aligned_cols=189 Identities=20% Similarity=0.298 Sum_probs=165.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.| ..+....|++++++|++|+.||.|++||+.+ ......+.+|.+.|++++|+|++++|++
T Consensus 96 ~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s 156 (420)
T 3vl1_A 96 RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF------------------NLQREIDQAHVSEITKLKFFPSGEALIS 156 (420)
T ss_dssp SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS------------------CEEEEETTSSSSCEEEEEECTTSSEEEE
T ss_pred cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC------------------cceeeecccccCccEEEEECCCCCEEEE
Confidence 44 4556667899999999999999999999853 4456677899999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------------
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------- 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------- 251 (344)
|+.||.|++||+.+++....+ ..|...|.+++|+|++.+|++++.|+.+++|+
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTL--IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEE--ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EeCCCeEEEEeCCCCcCceEE--cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 999999999999988655433 46888999999999999999999999999992
Q ss_pred ----------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCC
Q psy15157 252 ----------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDS 308 (344)
Q Consensus 252 ----------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg 308 (344)
|+++++++|+.||.|++||+++++.+..+...|. ..|.+++|+|+++ +|++|+.||
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT-CSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS-SCEEEEEECSSCTTEEEEEETTS
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC-CCceeEEEeCCCCCEEEEEeCCC
Confidence 5788999999999999999999998888765554 4799999999999 999999999
Q ss_pred cEEEEEcCCCee-EEEeecC
Q psy15157 309 LVKLWELSSARC-LIAYTGA 327 (344)
Q Consensus 309 ~i~vwd~~~~~~-~~~~~~~ 327 (344)
.|++||+++++. +..+.+|
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp EEEEEETTCTTSCSEEEEES
T ss_pred eEEEEEcCCCcCchhhhhcc
Confidence 999999999754 7778774
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.1e-29 Score=224.26 Aligned_cols=205 Identities=19% Similarity=0.323 Sum_probs=165.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc------------CCeEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI------------EEVTC 184 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~ 184 (344)
.|.+.|++++|+|+|++||+|+.||.|+|||+.+...... ...........+.+|. ..|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~-------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQS-------HSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----C-------CCCCCEEEEEEEECCCCEEEGGGTEEECCCCCE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCc-------ccccceeEecccccccccccccccccccCceEE
Confidence 4778999999999999999999999999999975321110 0112234577888998 88999
Q ss_pred EEEcCCC--CEEEEEeCCCcEEEEEcCCCccccc--------------------------------------eeeecccc
Q psy15157 185 LEFHPSA--PILASGSKDKTVKMFDYSKSSVRKA--------------------------------------HKTIQEST 224 (344)
Q Consensus 185 ~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~--------------------------------------~~~~~~~~ 224 (344)
++|+|++ ..|++++.||+|++||+.++..... .....|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9999998 7999999999999999976432100 11235788
Q ss_pred ceEEEEEecCCCEEEEEeCCCEEEEE-------------------------------cCCC-CEEEEEeCCCcEEEEeCC
Q psy15157 225 FVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------------SSDG-RIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 225 ~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------------~~~~-~~l~~~~~dg~i~iwd~~ 272 (344)
.|.+++|+|++++|++| .|+.+++| +|++ .++++|+.||.|++||++
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 89999999999999999 79999998 5677 899999999999999999
Q ss_pred CCeE----EeeecccCCC-----------ccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-CeeEEEeecCCCcC
Q psy15157 273 SSKC----VATFSKAHDG-----------AEISSLTFTRNGKYLLSSGKDSLVKLWELSS-ARCLIAYTGAGSMG 331 (344)
Q Consensus 273 ~~~~----~~~~~~~~~~-----------~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~ 331 (344)
+++. +..+. .+.. ..|.+++|+|+|++|++++. +.|++||+++ ++++..+.+|....
T Consensus 258 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 258 ASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred CCccccceeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9876 55554 3332 26999999999999999998 9999999998 99999999986543
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=6.8e-28 Score=219.15 Aligned_cols=201 Identities=25% Similarity=0.435 Sum_probs=173.1
Q ss_pred ceeEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPC-RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.| .++.| +++++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~------------------~~~~~~~~~h~~~V~~l~~~~ 172 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN------------------KKFLLQLSGHDGGVWALKYAH 172 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECS
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC------------------CcEEEEEeCCCcCEEEEEEcC
Confidence 345678998885 66666 578999999999999999853 456788899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEe--cCCCEEEEEeCCCEEEEEcC---------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH--PCGDYMVVGTDHFVLRLYSS--------------- 252 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~i~~~~~--------------- 252 (344)
++ .|++|+.||+|++||+.+++.... ...|...|.+++|+ +++.++++|+.|+.+++|+.
T Consensus 173 ~~-~l~s~s~dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 173 GG-ILVSGSTDRTVRVWDIKKGCCTHV--FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred CC-EEEEEeCCCCEEEEECCCCcEEEE--ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 88 999999999999999998865433 34588899999998 57899999999999999942
Q ss_pred -----------------------------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 253 -----------------------------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 253 -----------------------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
++.++++|+.||.|++||+++++++..+. .|. ..|.+++|+|++++|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHT-DRIYSTIYDHERKRCIS 327 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCEEEEEEETTTTEEEE
T ss_pred ceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCC-CCEEEEEEcCCCCEEEE
Confidence 36789999999999999999999998886 344 46999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 304 SGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
|+.||.|++||+++++++..+.+|......+.+
T Consensus 328 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 999999999999999999999998776655443
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.4e-28 Score=214.64 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=163.8
Q ss_pred ceeEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|.+.|++++|+++ +++|++|+.||.|++||+.+. .......+..|...|.+++|+
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------------RWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEEC
T ss_pred eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC----------------ceeEeeeecCCCcceEEEEeC
Confidence 34567899999999999987 999999999999999999642 123567788899999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-------------CCCEEEEEeCCCEEEEE---
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-------------CGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~~--- 250 (344)
|+ +.+|++++.||.|++||+++...........+...|.+++|+| ++.++++++.++.|++|
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 99 8999999999999999999876555555667888999999999 69999999999999998
Q ss_pred ------------------------cCC---CCEEEEEeCCCcEEEEeCCCCe---EEeeecccCCCccEEEEEEccCCCE
Q psy15157 251 ------------------------SSD---GRIYCSGSKDGDIKIWDGVSSK---CVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 ------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.++++++.||.|++||++++. ....+........|.+++|+|++++
T Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE
Confidence 678 8999999999999999998863 2222221222357999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|++++.||.|++|++..+.
T Consensus 271 l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 271 LALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEEESSSSEEEEEEEETT
T ss_pred EEEecCCCcEEEEeCCCCC
Confidence 9999999999999998554
No 57
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3e-28 Score=218.90 Aligned_cols=216 Identities=20% Similarity=0.283 Sum_probs=166.3
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC----------------------CcC-CCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------PQN-DQQGH 169 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------~~~-~~~~~ 169 (344)
..+.+|...|++++|+|+|++||+|+.||+|+|||+.++.......... ... .....
T Consensus 141 ~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 3446788999999999999999999999999999998764433222110 000 12234
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCC-EEEE--EeCC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGD-YMVV--GTDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~~ 244 (344)
..+..+.+|...+..+.|+|++.++++++.|+.+++||..+++... ......+...|.+++|+|.+. .+++ |+.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 5567788999999999999999999999999999999998765322 233445778899999999765 4444 3578
Q ss_pred CEEEEE----------------------cCCCCEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 245 FVLRLY----------------------SSDGRIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 245 ~~i~~~----------------------~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+.|++| ++++..+++++ .|+.|+|||+.+++++..+. +|. ..|++++|+|+|++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~-~~V~~l~~spdg~~ 378 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-SRVLSLTMSPDGAT 378 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSC
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCC-CCEEEEEEcCCCCE
Confidence 999998 57778887765 78999999999999999987 455 47999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
|+||+.|++|++||+....+....+.+...
T Consensus 379 l~S~s~D~tvriWdv~~~~~~~~~~~~~~~ 408 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDPARRREREKAS 408 (420)
T ss_dssp EEEEETTTEEEEECCSCSSCC---------
T ss_pred EEEEecCCeEEEEECCCCCccchhhhccCC
Confidence 999999999999999888777666655443
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=222.26 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=164.5
Q ss_pred ceeEE-ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYV-TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~-~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+.... ........+ .|.+.|.+++|+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~------------~~~~~~~~~-~h~~~v~~~~~~ 120 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG------------EVYSSSLTY-DCSSTVTQITMI 120 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT------------CCCSCSEEE-ECSSCEEEEEEC
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC------------cccceeeec-cCCCCEEEEEEe
Confidence 44556 88999999999999 9999999999999999998642110 001112222 489999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcC---CCcccccee--------eec--cccceEEEE--EecCCCEEEEEeCCCEEEEE---
Q psy15157 189 PSAPILASGSKDKTVKMFDYS---KSSVRKAHK--------TIQ--ESTFVRCLS--FHPCGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~--------~~~--~~~~v~~~~--~~~~~~~l~~~~~~~~i~~~--- 250 (344)
|++.+|++|+.||.|++||+. +++...... ... +...+.++. +++++.++++|+.++.|++|
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999995 333222111 111 345566666 55789999999999999998
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc----CCCEEEEE
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR----NGKYLLSS 304 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~s~ 304 (344)
+|++.++++|+.||.|++||+++++++..+...+. ..|.+++|+| ++.+|++|
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-APITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-EEEEEEEECTTTCTTEEEEEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-CceEEEEeccccCCCccEEEEE
Confidence 67899999999999999999999999988764444 4799996654 68899999
Q ss_pred eCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 305 GKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
+.||.|++||+++++++..+.+|...
T Consensus 280 ~~dg~i~iwd~~~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 280 SSKTFLTIWNFVKGHCQYAFINSDEQ 305 (437)
T ss_dssp STTEEEEEEETTTTEEEEEEESSSSC
T ss_pred cCCCcEEEEEcCCCcEEEEEEcCCCC
Confidence 99999999999999999999987543
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-28 Score=215.65 Aligned_cols=204 Identities=16% Similarity=0.259 Sum_probs=173.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
|.+.|++++|+|++++|++|+.||.|++||.. ......+..|...|.+++|+|++++|+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-------------------GALLNVLNFHRAPIVSVKWNKDGTHIISM 167 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-------------------SCEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-------------------CCeeeeccCCCccEEEEEECCCCCEEEEE
Confidence 78899999999999999999999999999943 34677888999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccce------------------------------------------------------eeeccc
Q psy15157 198 SKDKTVKMFDYSKSSVRKAH------------------------------------------------------KTIQES 223 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~------------------------------------------------------~~~~~~ 223 (344)
+.||.|++||+.+++....+ ....+.
T Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 247 (425)
T 1r5m_A 168 DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH 247 (425)
T ss_dssp ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCS
T ss_pred ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC
Confidence 99999999999776432211 112356
Q ss_pred cceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 224 TFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
..|.+++|+|+++++++++.++.+++| ++++ ++++++.|+.|++||+++++.+..+
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 789999999999999999999999998 5677 9999999999999999999988888
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe--------------------eEEEeecCCCcCceeeeeeec
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR--------------------CLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 340 (344)
.. +. ..|.+++|+|++++|++++.||.|++||+++++ ++..+.+|........+.+++
T Consensus 327 ~~-~~-~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 327 IV-DG-VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp EC-TT-CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred cc-CC-ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 63 33 479999999999999999999999999999988 899999885532455666666
Q ss_pred cCC
Q psy15157 341 DAD 343 (344)
Q Consensus 341 ~~~ 343 (344)
++.
T Consensus 405 ~~~ 407 (425)
T 1r5m_A 405 AGN 407 (425)
T ss_dssp TSS
T ss_pred CCc
Confidence 653
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=7.3e-29 Score=214.41 Aligned_cols=228 Identities=19% Similarity=0.235 Sum_probs=168.3
Q ss_pred CCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccc
Q psy15157 77 SIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLA 153 (344)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~ 153 (344)
++.++|....++.++.+-.. ..+... ........+.+|.+.|++++|++ ++++|++|+.|++|++||++++
T Consensus 18 ~v~~s~~g~~lasgs~D~~v~lwd~~~----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-- 91 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRN----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG-- 91 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEET----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS--
T ss_pred EeeEcCCCCEEEEEeCCCeEEEEEecC----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC--
Confidence 44566666666665543211 111110 01123456789999999999986 4899999999999999998631
Q ss_pred cccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCcccc-ceeeeccccceEEEE
Q psy15157 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--APILASGSKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLS 230 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~ 230 (344)
.......+.+|...|.+++|+|+ +.+|++|+.||+|++||++.+.... ......|...+.+++
T Consensus 92 --------------~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 92 --------------TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157 (316)
T ss_dssp --------------CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCE
T ss_pred --------------cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEE
Confidence 12456678899999999999998 7799999999999999998753211 122235677899999
Q ss_pred EecC-----------------CCEEEEEeCCCEEEEE--------------------------cCCC----CEEEEEeCC
Q psy15157 231 FHPC-----------------GDYMVVGTDHFVLRLY--------------------------SSDG----RIYCSGSKD 263 (344)
Q Consensus 231 ~~~~-----------------~~~l~~~~~~~~i~~~--------------------------~~~~----~~l~~~~~d 263 (344)
|+|+ +.+|++|+.|+.|++| +|++ .+|++|+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred EccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 9997 4789999999999988 3444 789999999
Q ss_pred CcEEEEeCCCC---eE-EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-C--eeEEEeec
Q psy15157 264 GDIKIWDGVSS---KC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS-A--RCLIAYTG 326 (344)
Q Consensus 264 g~i~iwd~~~~---~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-~--~~~~~~~~ 326 (344)
++|++||+.+. .. ...+. .|. ..|.+++|+|++++|++++.|+.|++|+... + .++..+..
T Consensus 238 ~~v~iw~~~~~~~~~~~~~~~~-~~~-~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 238 GRVFIWTCDDASSNTWSPKLLH-KFN-DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp CEEEEEECSSTTCCCCBCCEEE-ECS-SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred CeEEEEEccCccccchhhhhhh-cCC-CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 99999998762 11 11222 343 4799999999999999999999999999863 3 45555553
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.1e-28 Score=236.17 Aligned_cols=208 Identities=16% Similarity=0.330 Sum_probs=182.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.||.|+|||+.+ +..+..+.+|.+.|.+++|+|++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~------------------~~~~~~~~~~~~~v~~~~~s~~~ 67 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET------------------QVEVRSIQVTETPVRAGKFIARK 67 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEEEGGG
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC------------------CceEEEEecCCCcEEEEEEeCCC
Confidence 456789999999999999999999999999999999853 45677888999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++|+.||.|++||+.+++....+ ..|...|++++|+|++.++++++.++.+++|
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 99999999999999999988654433 4578899999999999999999999999998
Q ss_pred ---cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ---SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ---~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+| ++..+++++.||.|++||+.++.....+..++. ..+.+++|+| ++.+|++++.||.|++||+++++++..+
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE
Confidence 56 788999999999999999998887777764443 4699999999 9999999999999999999999999999
Q ss_pred ecCCCcCceeeeeeeccC
Q psy15157 325 TGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~ 342 (344)
.+|.... ..+.+++++
T Consensus 225 ~~~~~~v--~~~~~~~~~ 240 (814)
T 3mkq_A 225 EGHMSNV--SFAVFHPTL 240 (814)
T ss_dssp ECCSSCE--EEEEECSSS
T ss_pred cCCCCCE--EEEEEcCCC
Confidence 9886543 444455554
No 62
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=7.3e-28 Score=206.98 Aligned_cols=187 Identities=22% Similarity=0.350 Sum_probs=155.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.+ .......+.+|...|.+++|+|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~-----------------~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN-----------------NWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG-----------------TTEEEEEECCCCSCEEEEEECTT
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC-----------------CcchhhhhcccCCcEEEEEECCC
Confidence 3456789999999999999999999999999999999863 2345677899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE-----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~----------------- 250 (344)
++..|++|+.||+|++||+++........ ..+...+..+.|+| ++.++++|+.|+.|++|
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~ 230 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN 230 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC
Confidence 57899999999999999998765433322 23556788899987 67899999999999999
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC--EEEEEeCCCcEEEEEcCCC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK--YLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~s~~~dg~i~vwd~~~~ 318 (344)
+|++.+|++|+.||.|++||..+++....+.. +. ..+.+++|+|++. ++++|++| .+.+|++...
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GL-ERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-SS-SSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC-CC-ccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 78899999999999999999999999988874 33 3699999999875 57777655 4778887653
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=9.3e-28 Score=208.90 Aligned_cols=204 Identities=20% Similarity=0.304 Sum_probs=166.1
Q ss_pred ceeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|...|++++|+| ++++|++|+.||.|++||+.+..... ..........+..|...|.+++|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~ 119 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC---------SGRRWNKLCTLNDSKGSLYSVKFA 119 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT---------SSCSEEEEEEECCCSSCEEEEEEC
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccc---------cccCcceeeeecccCCceeEEEEc
Confidence 3455689999999999999 69999999999999999997532110 011225677888999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceee-----------eccccceEEEEEecC---CCEEEEEeCCCEEEEE--
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKT-----------IQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~-- 250 (344)
|+ +.+|++++.||.|++||+++++....+.. ..+...+.+++|+|+ +.++++++.++.+.+|
T Consensus 120 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~ 199 (351)
T 3f3f_A 120 PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG 199 (351)
T ss_dssp CGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEEC
T ss_pred CCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEcc
Confidence 99 99999999999999999998765443321 145678999999997 9999999999888665
Q ss_pred -----------------------cCCC----CEEEEEeCCCcEEEEeCCCC-----------------------------
Q psy15157 251 -----------------------SSDG----RIYCSGSKDGDIKIWDGVSS----------------------------- 274 (344)
Q Consensus 251 -----------------------~~~~----~~l~~~~~dg~i~iwd~~~~----------------------------- 274 (344)
+|++ .+|++|+.||.|++||++.+
T Consensus 200 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
T 3f3f_A 200 KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGR 279 (351)
T ss_dssp TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------------------
T ss_pred CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccc
Confidence 6787 89999999999999998865
Q ss_pred -----------------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 275 -----------------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 275 -----------------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+..+. .|. ..|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 280 SDSNTEEKAELQSNLQVELLSEHD-DHN-GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp -----------CCSEEEEEEEEEC-TTS-SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred cccccceeeeecccccccEEEEEe-ccc-ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 4444454 344 469999999999999999999999999999886555443
No 64
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=7.3e-28 Score=207.58 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=162.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC-----------------------CcCCCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE-----------------------PQNDQQGH 169 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~-----------------------~~~~~~~~ 169 (344)
..+.+|...|++++|+|++++|++|+.||+|++||++++.......... ........
T Consensus 61 ~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 61 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence 3456889999999999999999999999999999998765433221110 00112334
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEE---EEeCC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMV---VGTDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~---~~~~~ 244 (344)
..+..+.+|...+..+.+++++++|++++.||.|++||+++++... ......+...|.++.++|.+..++ .++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 5667788999999999999999999999999999999998875432 223344667899999999766443 45678
Q ss_pred CEEEEE----------------------cCCCCEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 245 FVLRLY----------------------SSDGRIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 245 ~~i~~~----------------------~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+.+++| .+++..+++++ .|+.|++||+++++++..+. +|. ..|++++|+|+|++
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~-gH~-~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-SRVLSLTMSPDGAT 298 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSC
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-CCC-CCEEEEEEcCCCCE
Confidence 899998 56677776654 79999999999999999987 454 47999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|+|||.||+|+|||+....
T Consensus 299 l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEETTTEEEEECCSCCC
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999997653
No 65
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1e-28 Score=209.75 Aligned_cols=195 Identities=16% Similarity=0.138 Sum_probs=138.5
Q ss_pred CCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCcccccc-C---CCCCCcCC-CCCCceEEEecCCcCCeEEEEEc
Q psy15157 118 HKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSS-M---ESSEPQND-QQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 118 h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~-~---~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
|...|+.++|+|+ ++++++++.+ +++|++.++..... . +....... ...++.+..+.+|...++.++|+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 4457888888888 8888887742 44555543322111 0 11111111 13356677788899999999999
Q ss_pred C---CCCEEEEEeCCCcEEEEEcCCCccccceeeec-cccceEEEEEecCCCEE------------EEEeCCCEEEEEcC
Q psy15157 189 P---SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYM------------VVGTDHFVLRLYSS 252 (344)
Q Consensus 189 ~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l------------~~~~~~~~i~~~~~ 252 (344)
+ ++..|++|+.|++|+|||+.+++....+.... +...+.+++|+|+|.++ ++|+.|+++++|++
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 8 67899999999999999999998766654211 23467888999999987 45778999999963
Q ss_pred --------------CCC------------EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 253 --------------DGR------------IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 253 --------------~~~------------~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+|+ ++++|+.|++|+|||+.+++++.++.. |....+.+++|+|||++|++|+.
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEEC
Confidence 344 478899999999999999999999874 43333556899999999999999
Q ss_pred CCcEEEEEc
Q psy15157 307 DSLVKLWEL 315 (344)
Q Consensus 307 dg~i~vwd~ 315 (344)
|++|+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999996
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3e-27 Score=203.19 Aligned_cols=206 Identities=21% Similarity=0.312 Sum_probs=172.2
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.....+.+|.+.|++++| +++++|++|+.||.|++||+.+ ......+..|...|.+++|+|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~------------------~~~~~~~~~~~~~v~~~~~~~ 69 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD------------------QWLGTVVYTGQGFLNSVCYDS 69 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS------------------SEEEEEEEECSSCEEEEEEET
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC------------------CEEEEEeecCCccEEEEEECC
Confidence 345678999999999999 9999999999999999999853 455677788999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcccc-ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.+|++|+.||.|++|++....... ......|...|.+++| +++++++++.++.+++|
T Consensus 70 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~ 147 (313)
T 3odt_A 70 EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWD 147 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEE
T ss_pred CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeE
Confidence 99999999999999999997754222 2333457888999999 57899999999999998
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+++.++++++.||.|++|| ..+....+...+. ..+.+++|+|++. +++++.||.|++||+++++++..+.+
T Consensus 148 ~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 148 AKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHN-DVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCS-SCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCc-ccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 23899999999999999999 4556666654344 5799999999998 99999999999999999999999998
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|.... ..+.+++++
T Consensus 224 ~~~~i--~~~~~~~~~ 237 (313)
T 3odt_A 224 HESFV--YCIKLLPNG 237 (313)
T ss_dssp CSSCE--EEEEECTTS
T ss_pred CCceE--EEEEEecCC
Confidence 87654 444455543
No 67
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.9e-28 Score=222.79 Aligned_cols=194 Identities=10% Similarity=0.083 Sum_probs=157.8
Q ss_pred EEecCCCceEEEEECCC------CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 114 YVTSHKSPCRAGAFSID------GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~------~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.+.+|.+.|++++|+|+ +.+||+|+.||+|+|||+.+....... ......+...+.+|...|++++|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~-------~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV-------FKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE-------EECCCSCSEEECCTTTCEEEEEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc-------ceeecCceEEEEcCCCCEEEEEe
Confidence 35678899999999996 579999999999999999753211000 00011234567899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEE--EEecCC-CEEEEEeCCCEEEEE--------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL--SFHPCG-DYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~~~i~~~-------------- 250 (344)
++++ .|++|+.||+|++||++++... ......|...|+++ +|+|+| .+|++|+.|+.+++|
T Consensus 275 s~~~-~lasgs~DgtV~lWD~~~~~~~-~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 275 LSPT-TVVCGFKNGFVAEFDLTDPEVP-SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp SSSS-EEEEEETTSEEEEEETTBCSSC-SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred cCCC-eEEEEeCCCEEEEEECCCCCCc-eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 9864 8999999999999999876432 22345688899999 578887 899999999999999
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+|++..+++++.|++|++||++++.++..+.. |. ..|++++|+|+|++|++|+.||+|++||+..+
T Consensus 353 ~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~-~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RE-TTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CS-SCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CC-CceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 56788899999999999999999988777764 54 47999999999999999999999999998653
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.4e-28 Score=220.68 Aligned_cols=187 Identities=24% Similarity=0.324 Sum_probs=154.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|+.|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD------------------GSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCCCEEEECCSSCEEEEEEETTT
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC------------------CcCceEEcCCCCcEEEEEEcCCC
Confidence 344569999999999999999999999999999999964 33456778999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeee-ccc---------------------cceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTI-QES---------------------TFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~---------------------~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.+|++++.||.|++||+++++....+... .+. ..+.+++|+|+++++++|+.++.+++
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 99999999999999999988655444321 122 33444556789999999999999999
Q ss_pred E------------------------cCCCC-EEEEEeCCCcEEEEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 250 Y------------------------SSDGR-IYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 250 ~------------------------~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
| +|++. ++++|+.||.|++||+++++. +..+..++ ...|.++.| +++++|++
T Consensus 274 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~l~s 351 (420)
T 3vl1_A 274 HNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVYF-AAGALFVS 351 (420)
T ss_dssp EETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEEE-ETTEEEEE
T ss_pred EECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEEe-CCCCEEEE
Confidence 8 67788 999999999999999998754 55665434 457888855 57889999
Q ss_pred EeCCCcEEEEEcCCC
Q psy15157 304 SGKDSLVKLWELSSA 318 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~ 318 (344)
++.||.|++||+...
T Consensus 352 ~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 352 SGFDTSIKLDIISDP 366 (420)
T ss_dssp ETTTEEEEEEEECCT
T ss_pred ecCCccEEEEeccCC
Confidence 999999999999874
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=8.1e-28 Score=213.97 Aligned_cols=200 Identities=16% Similarity=0.231 Sum_probs=167.4
Q ss_pred ceeEEecCCCceEEEEECCC----C---CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-----
Q psy15157 111 ETAYVTSHKSPCRAGAFSID----G---QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH----- 178 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~----~---~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----- 178 (344)
....+.+|...|++++|+|+ + ++|++++.||.|++||+.+... ........+..|
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~-------------~~~~~~~~~~~~~~~~~ 120 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE-------------TKKVIFEKLDLLDSDMK 120 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT-------------TCCEEEEEECCSCTTGG
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc-------------cccccceeecccccccC
Confidence 45667899999999999999 9 9999999999999999964211 111226677888
Q ss_pred cCCeEEEEEc----CCCCE-EEEEeCCCcEEEEEcCC------Ccccc-----ceee-----eccccceEEEEEecCCCE
Q psy15157 179 IEEVTCLEFH----PSAPI-LASGSKDKTVKMFDYSK------SSVRK-----AHKT-----IQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 179 ~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~ 237 (344)
...|.+++|+ |++.. |++++.||.|++||+.+ ++... .+.. ..+...+.+++|+|++ +
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E
T ss_pred CCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e
Confidence 5999999999 99999 99999999999999988 55443 3322 3467789999999999 9
Q ss_pred EEEEeCCCEEEEE-----------------------------cCCCCEEEEEeCC---CcEEEEeCCCCeEEeeeccc--
Q psy15157 238 MVVGTDHFVLRLY-----------------------------SSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKA-- 283 (344)
Q Consensus 238 l~~~~~~~~i~~~-----------------------------~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-- 283 (344)
+++++.++.+++| +|++.+|++++.| +.|++||+++++.+..+...
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 9999999999988 2367889999999 99999999999988888641
Q ss_pred ----------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 284 ----------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 284 ----------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|. ..|.+++|+|++++|++++.||.|++||+++++++..+.
T Consensus 280 ~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 280 SSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp ------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccccccccC-CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 44 479999999999999999999999999999999999999
No 70
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=8.3e-28 Score=209.48 Aligned_cols=198 Identities=14% Similarity=0.164 Sum_probs=167.5
Q ss_pred eeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc-CCccccccCCCCCCcCCCCCCceEEEecC--CcCCeEEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDV-DRMLAKSSMESSEPQNDQQGHPVIRTLYD--HIEEVTCLEF 187 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~ 187 (344)
...+.+|...|++++|+|+++ +|++|+.||.|++||+ .+. ....+.+ |...|.+++|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-------------------~~~~~~~~~~~~~v~~l~~ 109 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-------------------SFQALTNNEANLGICRICK 109 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-------------------SEEECBSCCCCSCEEEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-------------------ceEeccccCCCCceEEEEe
Confidence 344568999999999999999 9999999999999998 642 2366778 9999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCC---------CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSK---------SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
+| +..|++++.||.|++||+++ ++....+ .+...+.+++|+|++ +++++.++.+++|
T Consensus 110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT---KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS---SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC
T ss_pred CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE---eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc
Confidence 99 99999999999999999987 5443333 367889999999887 9999999999988
Q ss_pred ------------------cC-CCCEEEEEeCCCcEEEEeCCCC------eEEeeecccCC-------CccEEEEEEccCC
Q psy15157 251 ------------------SS-DGRIYCSGSKDGDIKIWDGVSS------KCVATFSKAHD-------GAEISSLTFTRNG 298 (344)
Q Consensus 251 ------------------~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~-------~~~v~~i~~~~~~ 298 (344)
+| ++.++++++.||.|++||+... +....+..+.. ...|.+++|+|++
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC
Confidence 56 8899999999999999999876 55566653321 2379999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcCcee
Q psy15157 299 KYLLSSGKDSLVKLWELSSARCLIAYTGA-GSMGQQF 334 (344)
Q Consensus 299 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 334 (344)
++|++++.||.|++||+.+++++..+.+| ......+
T Consensus 264 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 264 KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred CEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence 99999999999999999999999999987 6554433
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=9.1e-28 Score=210.89 Aligned_cols=187 Identities=18% Similarity=0.315 Sum_probs=155.6
Q ss_pred ceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLE 186 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~ 186 (344)
....+.+|...|++++|+| ++++|++|+.||.|++||+.+ ......+ .+|...|.+++
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT------------------DTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT------------------TEEEEEECSTTSCSSCEEEEE
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec------------------CeEEEEecccccccCceeEEE
Confidence 3456789999999999999 999999999999999999964 3445555 68999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCcccccee--------------------------eeccccceEEEEEecCCCEEEE
Q psy15157 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHK--------------------------TIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
|+|++.+|++++.||.|++||+++++....+. ...+...|.+++|+ ++++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 99999999999999999999998865432221 11267789999998 789999
Q ss_pred EeCCCEEEEE-------------------------------------cCC--CCEEEEEeCCCcEEEEeCCCCeE----E
Q psy15157 241 GTDHFVLRLY-------------------------------------SSD--GRIYCSGSKDGDIKIWDGVSSKC----V 277 (344)
Q Consensus 241 ~~~~~~i~~~-------------------------------------~~~--~~~l~~~~~dg~i~iwd~~~~~~----~ 277 (344)
++.++.+++| +++ +++|++|+.||.|++||+.+++. .
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 326 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC 326 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc
Confidence 9999999999 244 89999999999999999998753 3
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+..+.....|++++|+|++++|++++.||.|++||+.+
T Consensus 327 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 327 TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 3454332235799999999999999999999999999853
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.1e-27 Score=212.28 Aligned_cols=204 Identities=11% Similarity=0.126 Sum_probs=165.4
Q ss_pred ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCCC
Q psy15157 116 TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPSA 191 (344)
Q Consensus 116 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~ 191 (344)
.+|.+.|++++|+| ++++|++++.|+.|++||+.+ .....+ ..|...|.+++|+|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------------------~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-------------------SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-------------------CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-------------------CceEEEeccCCCCCCeEEEEECCCC
Confidence 47999999999999 789999999999999999963 223333 3455889999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~-------------------- 250 (344)
.+|++|+.||.|++||++ ++.. .....|...|.+++|+|++. ++++++.|+.+++|
T Consensus 176 ~~l~~~~~d~~i~i~d~~-~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGLD-GHEI--FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP 252 (383)
T ss_dssp TEEEEEETTSEEEEEETT-SCEE--EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred CEEEEECCCCCEEEEECC-CCEE--EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence 999999999999999995 3332 33456788999999999999 99999999999998
Q ss_pred ------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccC---------------CCccEEEEEEccCCCEEEEEeCCC
Q psy15157 251 ------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH---------------DGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 251 ------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
+| ++.++++++.|+.|++||+++++....+..+. ....+..++|+|++++ +|+.||
T Consensus 253 v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~ 330 (383)
T 3ei3_B 253 VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKR 330 (383)
T ss_dssp EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCC
T ss_pred eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCC
Confidence 68 99999999999999999999887655554211 0123555777777776 788999
Q ss_pred cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 309 LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|++||+.+++++..+.++...+....+.+++++.
T Consensus 331 ~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 331 TIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD 365 (383)
T ss_dssp CEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS
T ss_pred eEEEEecCCCceeeeecCCCCCceEEEEEEecCcc
Confidence 99999999999999999866554455556666654
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=3.1e-27 Score=229.21 Aligned_cols=208 Identities=23% Similarity=0.378 Sum_probs=179.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.+ +..+..+.+|.+.|++++|+|+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~------------------~~~~~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT------------------GEKVVDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSS
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEecCCCCEEEEEEeCC
Confidence 4556789999999999999999999999999999999853 4567788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------------- 250 (344)
+++|++++.||.|++||+.++... ......|...|.+++|+| ++..+++++.++.+++|
T Consensus 109 ~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 109 KPYVLSGSDDLTVKLWNWENNWAL-EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp SSEEEEEETTSEEEEEEGGGTSEE-EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCceE-EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 999999999999999999876322 223345778899999999 89999999999999999
Q ss_pred -----cC--CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 251 -----SS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 251 -----~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
+| ++.++++++.||.|++||..+++.+..+.. |. ..|.+++|+|++++|++++.||.|++||+.+++.+..
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-HM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-CS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-CC-CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 34 899999999999999999999999888863 43 4699999999999999999999999999999999999
Q ss_pred eecCCCcCceeeeeeecc
Q psy15157 324 YTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (344)
+..+... ...+.++++
T Consensus 266 ~~~~~~~--v~~~~~~~~ 281 (814)
T 3mkq_A 266 LNVGLER--SWCIATHPT 281 (814)
T ss_dssp ECCSSSS--EEEEEECTT
T ss_pred eecCCCc--EEEEEEccC
Confidence 9887543 334444444
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-27 Score=230.59 Aligned_cols=186 Identities=14% Similarity=0.171 Sum_probs=158.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+|.+.|++++|+|++++||+|+.||+|+||+..+ ...... ..|...|.+++|+| +++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~------------------~~~~~~-~~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ------------------VEVVIK-LEDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT------------------CEEEEE-CSSCCCEEEEEEET-TTE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC------------------cEEEEE-cCCCCCEEEEEEcC-CCE
Confidence 3469999999999999999999999999999999753 222222 35788999999999 889
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------- 252 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------- 252 (344)
|++++.|++|++||+.+++....+ .+...|++++|+|+++++++|+.|+.|++|+.
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~---~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTV---FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEE---ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEEECcCeEEEEECCCCcEEEEE---cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 999999999999999988655444 35678999999999999999999999999953
Q ss_pred --------------CCCEEEEEeCCCcEEEEeCCCCeEEeeeccc----------------CCCccEEEEEEccCCCEEE
Q psy15157 253 --------------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKA----------------HDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 253 --------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~~~v~~i~~~~~~~~l~ 302 (344)
++..+++|+.||.| +||+++++++..+..+ ++...|++++|+|+|++|+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 23578899999999 9999999988777532 0124699999999999999
Q ss_pred EEeCCCcEEEEEcCCCeeEEE
Q psy15157 303 SSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 303 s~~~dg~i~vwd~~~~~~~~~ 323 (344)
+|+.||.|++||+++++++..
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEE
T ss_pred EEECCCeEEEEECCCCcEEEE
Confidence 999999999999999988764
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3e-27 Score=205.94 Aligned_cols=209 Identities=9% Similarity=0.012 Sum_probs=170.9
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
..+|.+.|++++|+|++++|++|+.||.|++|++.+. ........+.+|...|.+++|+|+++ +
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 71 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ---------------AKNVDLLQSLRYKHPLLCCNFIDNTDLQ 71 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT---------------TTEEEEEEEEECSSCEEEEEEEESSSEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCC---------------CccccceeeeecCCceEEEEECCCCCcE
Confidence 3589999999999999999999999999999999642 11123455668999999999999999 9
Q ss_pred EEEEeCCCcEEEEEc-CCCccccceeeec--cccceEEEEEecCCCEEEEEeCCCEEEEEcCC-----------------
Q psy15157 194 LASGSKDKTVKMFDY-SKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD----------------- 253 (344)
Q Consensus 194 l~s~~~dg~i~iwd~-~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~----------------- 253 (344)
|++|+.||.|++||+ .+++. ..... |...|.+++|+| +.++++++.++.+++|+..
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 147 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred EEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE
Confidence 999999999999999 77654 33345 788999999999 9999999999999999422
Q ss_pred ------------CCEEEEEeCCCcEEEEeCCC-CeEE-eeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy15157 254 ------------GRIYCSGSKDGDIKIWDGVS-SKCV-ATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 254 ------------~~~l~~~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+..+++++.|+.|++||+++ +... ......+. ..+.+++|+| ++++|++++.||.|++|+++.+
T Consensus 148 ~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK-YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCS-SCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred eeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCC-CceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 22388999999999999998 5432 22222333 4799999999 9999999999999999999987
Q ss_pred ------eeEEEeecCCC-------cCceeeeeeeccCC
Q psy15157 319 ------RCLIAYTGAGS-------MGQQFELTLTVDAD 343 (344)
Q Consensus 319 ------~~~~~~~~~~~-------~~~~~~~~~~~~~~ 343 (344)
+.+..+.+|.. ......+.+++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 264 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK 264 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCC
Confidence 88889988865 33566677777654
No 76
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.7e-28 Score=215.32 Aligned_cols=210 Identities=18% Similarity=0.304 Sum_probs=173.0
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 194 (344)
..|...|++++|+|++++|++|+.||.|++||+.+. .........+.+|...|.+++|+|+ +.+|
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~--------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEA--------------NNAINSMARFSNHSSSVKTVKFNAKQDNVL 129 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSST--------------TSCCCEEEECCCSSSCCCEEEECSSSTTBE
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccc--------------cccccchhhccCCccceEEEEEcCCCCCEE
Confidence 368999999999999999999999999999999631 0123467888999999999999998 8899
Q ss_pred EEEeCCCcEEEEEcCCCc------cccce-eeeccccceEEEEEecC-CCEEEEEeCCCEEEEE----------------
Q psy15157 195 ASGSKDKTVKMFDYSKSS------VRKAH-KTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~------~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~---------------- 250 (344)
++++.||.|++||+.+++ ..... ....+...|.+++|+|+ +.++++++.++.+++|
T Consensus 130 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 130 ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP 209 (416)
T ss_dssp EEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC
T ss_pred EEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc
Confidence 999999999999998875 22111 22457788999999999 7899999999999998
Q ss_pred -------------cCCC-CEEEEEeCCC---cEEEEeCCCC-eEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEE
Q psy15157 251 -------------SSDG-RIYCSGSKDG---DIKIWDGVSS-KCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVK 311 (344)
Q Consensus 251 -------------~~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~ 311 (344)
+|++ .++++++.|+ .|++||++++ ..+..+...|. ..|.+++|+| ++++|++++.||.|+
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~dg~v~ 288 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSGRDNTVL 288 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEESSSEEE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEeCCCCEE
Confidence 3444 6899999999 9999999987 45555541344 4799999999 999999999999999
Q ss_pred EEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 312 LWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+||+++++++..+.+|..... .+.+++++
T Consensus 289 ~wd~~~~~~~~~~~~~~~~v~--~~~~s~~~ 317 (416)
T 2pm9_A 289 LWNPESAEQLSQFPARGNWCF--KTKFAPEA 317 (416)
T ss_dssp EECSSSCCEEEEEECSSSCCC--CEEECTTC
T ss_pred EeeCCCCccceeecCCCCceE--EEEECCCC
Confidence 999999999999998876544 44455543
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.3e-26 Score=205.26 Aligned_cols=201 Identities=20% Similarity=0.341 Sum_probs=166.3
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.|...|++++|+|++++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+ +..|++
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~--~~~l~~ 191 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES------------------QTKLRTMAGHQARVGCLSWN--RHVLSS 191 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEE--TTEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC------------------CeEEEEecCCCCceEEEEEC--CCEEEE
Confidence 4899999999999999999999999999999853 45677888999999999994 569999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
|+.||.|++||++.... .......|...|.+++|+|++.++++|+.|+.+++| +|+
T Consensus 192 ~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp EETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred EcCCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 99999999999985432 223345688899999999999999999999999998 564
Q ss_pred C-CEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE--EeCCCcEEEEEcCCCeeEEEe--ec
Q psy15157 254 G-RIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS--SGKDSLVKLWELSSARCLIAY--TG 326 (344)
Q Consensus 254 ~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~--~~ 326 (344)
+ .++++|+ .|+.|++||+.+++.+..+. .+ ..|.+++|+|++++|++ |+.||.|++||+.+++....+ .+
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~--~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~ 347 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVD-AG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA 347 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEE-CS--SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CC--CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC
Confidence 4 5666655 79999999999999988885 22 46999999999999999 448999999999998766654 45
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
|.. ....+.+++++.
T Consensus 348 h~~--~v~~~~~s~dg~ 362 (401)
T 4aez_A 348 HDT--RVLYSALSPDGR 362 (401)
T ss_dssp CSS--CCCEEEECTTSS
T ss_pred CCC--CEEEEEECCCCC
Confidence 544 445556666553
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-26 Score=198.55 Aligned_cols=205 Identities=20% Similarity=0.280 Sum_probs=171.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+..|...|++++|+|+++++++|+.||.|++|++... ........+.+|...|.+++| +
T Consensus 51 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 51 LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT---------------SGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC---------------TTSCC-CEECCCSSCEEEEEE--E
T ss_pred EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec---------------CCCCcccchhhcccCEEEEEe--c
Confidence 34556789999999999999999999999999999998642 223456678899999999999 5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------------- 250 (344)
+..+++++.||.|++|| .++. ......+...+.+++|+| ++.++++++.++.+++|
T Consensus 114 ~~~l~~~~~d~~i~~~d--~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWK--EGSL--VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRH 189 (313)
T ss_dssp TTEEEEEETTSEEEEEE--TTEE--EEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEE
T ss_pred CCEEEEEeCCCCEEEEc--CCcE--EEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEE
Confidence 67999999999999999 3322 233445788899999998 99999999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++++. +++++.||.|++||+++++.+..+. .|. ..|.+++|+|++ .|++++.||.|++||+++++++..+..|
T Consensus 190 ~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~-~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 190 LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHE-SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCS-SCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCC-ceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence 45666 8899999999999999999998886 344 479999999999 5899999999999999999999999988
Q ss_pred CCcCceeeeeeeccC
Q psy15157 328 GSMGQQFELTLTVDA 342 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~ 342 (344)
... ...+.+++++
T Consensus 266 ~~~--i~~~~~~~~~ 278 (313)
T 3odt_A 266 AIS--IWSVDCMSNG 278 (313)
T ss_dssp SSC--EEEEEECTTS
T ss_pred Cce--EEEEEEccCC
Confidence 654 4455555554
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=5.4e-27 Score=208.62 Aligned_cols=199 Identities=13% Similarity=0.130 Sum_probs=164.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS- 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 190 (344)
...+.+|.+.|++++|+| ++|++|+.||.|++||+.+... .........+.+|...|.+++|+|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~------------~~~~~~~~~~~~h~~~v~~~~~~~~~ 74 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN------------ENPKDKSYSHFVHKSGLHHVDVLQAI 74 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT------------CCGGGGEEEEECCTTCEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc------------ccCCCcceEEecCCCcEEEEEEeccc
Confidence 345679999999999998 8999999999999999974311 0113357788899999999999999
Q ss_pred ---C---CEEEEEeCCCcEEEEEcCCCcccc---ceeeecc-----ccceEEEEEe----cCCCE-EEEEeCCCEEEEE-
Q psy15157 191 ---A---PILASGSKDKTVKMFDYSKSSVRK---AHKTIQE-----STFVRCLSFH----PCGDY-MVVGTDHFVLRLY- 250 (344)
Q Consensus 191 ---~---~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~~~~i~~~- 250 (344)
+ .+|++++.||.|++||+.+++... ......+ ...|.+++|+ |++.+ +++++.++.+++|
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 154 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEe
Confidence 9 999999999999999998876410 1222334 4789999999 99999 9999999988887
Q ss_pred ----------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc--C---C
Q psy15157 251 ----------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA--H---D 285 (344)
Q Consensus 251 ----------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~ 285 (344)
++++ ++++++.||.|++||+++++.+..+... | .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 2345 8899999999999999999998888640 3 3
Q ss_pred CccEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCeeEEEeec
Q psy15157 286 GAEISSLTFTRNGKYLLSSGKD---SLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~ 326 (344)
..|.+++|+|++++|++++.| |.|++||+++++.+..+.+
T Consensus 234 -~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 234 -NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp -CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred -CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 479999999999999999999 9999999999999999988
No 80
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-26 Score=210.70 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=168.3
Q ss_pred EecCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSA 191 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~ 191 (344)
..+|.+.|++++|+|++++| ++|+.||.|+|||+.. .....+..+. .|...|++++|+|++
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~----------------~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDK----------------TSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECS----------------SSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcC----------------CCCceeeeeecccCCCCceEEEEcCCC
Confidence 35788999999999999996 8999999999999961 0233444554 577899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecC---CCEEEEEeCCCEEEEE----------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~---------------- 250 (344)
.+|++|+.||.|++|++.++.... ......|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 999999999999999998876442 1133457789999999999 9999999999999998
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc-----------------------CCCccEEEEEEccCCC
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA-----------------------HDGAEISSLTFTRNGK 299 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~i~~~~~~~ 299 (344)
+ ++.+|++|+.|+.|++||+++++++..+... .....|.+++|+|+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 5 7899999999999999999999988776521 1123589999999999
Q ss_pred EEEEEe-CCCcEEEEEc--CCC---eeEEEeecCCCcCceeeeeeec
Q psy15157 300 YLLSSG-KDSLVKLWEL--SSA---RCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 300 ~l~s~~-~dg~i~vwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
+|++++ .|+.|++|++ .++ +.+..+.++ +....+.+++
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~ 364 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP---YNVISLSAHN 364 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS---SCEEEEEEET
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC---CceEEEEecC
Confidence 999998 8999999999 666 777778876 3345555554
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3e-26 Score=201.31 Aligned_cols=208 Identities=15% Similarity=0.225 Sum_probs=175.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++++.||.|++||+.+ ...+..+. |...|.+++|+|+
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~------------------~~~~~~~~-~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN------------------GQCVATWK-SPVPVKRVEFSPC 126 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT------------------CCEEEEEE-CSSCEEEEEECTT
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEee-cCCCeEEEEEccC
Confidence 4556789999999999999999999999999999999964 33445555 8889999999999
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCCcccccee---------eecccc--ceEEEEEecCCCEEEEEeCCCEEEEE----
Q psy15157 191 APILASGSKD-----KTVKMFDYSKSSVRKAHK---------TIQEST--FVRCLSFHPCGDYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 191 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~---------~~~~~~--~v~~~~~~~~~~~l~~~~~~~~i~~~---- 250 (344)
+.++++++.+ |.|++||+.......... ...+.. .+.+++|+|+++++++++.++.+++|
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 9999999999 999999998765322221 122333 89999999999999999999999998
Q ss_pred --------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC--
Q psy15157 251 --------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-- 308 (344)
Q Consensus 251 --------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-- 308 (344)
+|++.+|++++.|+.|++||+++++.+..+. +. ..+.+++|+|+++++++++.++
T Consensus 207 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 207 NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TD-CPLNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CS-SCEEEEEECSSSSEEEEEECCC--
T ss_pred CcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CC-CCceeEEecCCCceEEEeecCCCc
Confidence 6899999999999999999999999888886 22 4699999999999999999988
Q ss_pred ------------cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 309 ------------LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+++||+.+++.+..+.+|.... ..+.+++++
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~s~~~ 327 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL--NTVAISPQG 327 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEECCSSCE--EEEEECTTS
T ss_pred eEEEEecCCCcceeEEEecCCCcchhheecccCcE--EEEEECCCC
Confidence 89999999999999999886654 445555554
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.3e-28 Score=222.46 Aligned_cols=210 Identities=12% Similarity=0.086 Sum_probs=160.8
Q ss_pred cCCCceEEEEECCCC---------CEEEE-------------------EeCCCeEEEEEcCCccccccCCCCCCcCCCCC
Q psy15157 117 SHKSPCRAGAFSIDG---------QLCAT-------------------GSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~---------~~l~s-------------------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (344)
.+.+.|++++|+|++ ++||+ ++.|++|+|||+.+... .
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~--------------~ 196 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTL--------------H 196 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTC--------------C
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCC--------------C
Confidence 478899999999876 56666 45788999999864210 0
Q ss_pred CceEEEecCCcCCeEEEEEcCC------CCEEEEEeCCCcEEEEEcCCCccc---------cceeeeccccceEEEEEec
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPS------APILASGSKDKTVKMFDYSKSSVR---------KAHKTIQESTFVRCLSFHP 233 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~v~~~~~~~ 233 (344)
......+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+.++... .......|...|++++|++
T Consensus 197 ~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 197 CVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS 276 (524)
T ss_dssp EEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS
T ss_pred ceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC
Confidence 1123456678899999999996 569999999999999999876422 0123345778899999998
Q ss_pred CCCEEEEEeCCCEEEEE--------------------------cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 234 CGDYMVVGTDHFVLRLY--------------------------SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 234 ~~~~l~~~~~~~~i~~~--------------------------~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
+ ..|++|+.|+.|++| +++| .+|++|+.|++|+|||++++++...+..+...
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 6 489999999999999 3566 89999999999999999998776666533222
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..|.+++|+|+++.+++++.|++|++||++++.++.++.+|.... .++.+++++.
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V--~sva~Sp~g~ 410 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI--TAIGVSRLHP 410 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE--EEEECCSSCC
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce--EEEEeCCCCC
Confidence 347899999999999999999999999999999999999887654 4455566553
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=3.1e-27 Score=206.85 Aligned_cols=209 Identities=18% Similarity=0.283 Sum_probs=166.2
Q ss_pred EecCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE----
Q psy15157 115 VTSHKSPCRAGAFSID---GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF---- 187 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~---~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~---- 187 (344)
..+|...|++++|+|+ +++|++|+.||.|++||+.+. ......+.+|...|.+++|
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~ 123 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP-----------------EMPVYSVKGHKEIINAIDGIGGL 123 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC-----------------SSCSEEECCCSSCEEEEEEESGG
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC-----------------CccEEEEEecccceEEEeecccc
Confidence 3489999999999998 699999999999999999642 1245678899999999965
Q ss_pred --cCCCCEEEEEeCCCcEEEEEcCCCc-cccceeeec--cccceEEEE----EecCCCEEEEEeCCCEEEEE--------
Q psy15157 188 --HPSAPILASGSKDKTVKMFDYSKSS-VRKAHKTIQ--ESTFVRCLS----FHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 188 --~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~--~~~~v~~~~----~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
+|++++|++|+.||.|++||+++++ ....+.... ....+.+++ |+|++.++++++.++.+++|
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 6789999999999999999999875 333332211 133788888 78899999999999999998
Q ss_pred --------------cC---CCCEEEEEeCCCcEEEEeCCCCeEEeeec----ccCCCccEEEEEEccCCC-EEEEEeCCC
Q psy15157 251 --------------SS---DGRIYCSGSKDGDIKIWDGVSSKCVATFS----KAHDGAEISSLTFTRNGK-YLLSSGKDS 308 (344)
Q Consensus 251 --------------~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~i~~~~~~~-~l~s~~~dg 308 (344)
+| ++.++++++.||.|++||+++++....+. ..|. ..|.+++|+|+++ +|++++.||
T Consensus 204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTS
T ss_pred eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc-CCEEEEEECCCCCcEEEEEeCCC
Confidence 56 89999999999999999998876554432 1343 4799999999998 899999999
Q ss_pred cEEEEEcCCC-------------------eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 309 LVKLWELSSA-------------------RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 309 ~i~vwd~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|++||++++ +++..+.+|... ...+.++++++
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~ 334 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP--ISSLDWSPDKR 334 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC--EEEEEECSSST
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCC--eeEEEEcCCCC
Confidence 9999999864 467777777554 44555566553
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=5.1e-27 Score=205.51 Aligned_cols=207 Identities=11% Similarity=0.206 Sum_probs=164.5
Q ss_pred ceeEEecCCCceEEEEECCCCC-EEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQ-LCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
....+.+|.+.|++++|+|++. ++++|+. ||.|+|||+.+. ........+|...|.+++
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~-----------------~~~~~~~~~~~~~v~~~~ 72 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG-----------------DLKLLREIEKAKPIKCGT 72 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS-----------------SEEEEEEEEESSCEEEEE
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC-----------------cccceeeecccCcEEEEE
Confidence 3445678999999999999986 5556666 999999999642 111223347899999999
Q ss_pred EcCC---CCEEEEEeCCCcEEEEEcCCCc-cccceeeeccccceEEEEE------ecCCCEEEEEeCCCEEEEE------
Q psy15157 187 FHPS---APILASGSKDKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSF------HPCGDYMVVGTDHFVLRLY------ 250 (344)
Q Consensus 187 ~~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~~~~i~~~------ 250 (344)
|+|+ +.+|++|+.||.|++||+.+++ .. .....|...|.++.| +|+++++++++.++.+++|
T Consensus 73 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 73 FGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred EcCCCCCCceEEEecCCCeEEEEeCCCCCccE--EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 9998 6899999999999999999876 33 333468888999955 6789999999999999999
Q ss_pred --------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc---CCCEE
Q psy15157 251 --------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR---NGKYL 301 (344)
Q Consensus 251 --------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l 301 (344)
++++.++++++.||.|++||+++++..... .+. ..|.+++|+| ++.+|
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~-~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIK-NGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECS-SCEEEEEESCSSSSCCEE
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCC-CceEEEEcCCCCCCCCEE
Confidence 268899999999999999999999876553 333 4699999999 99999
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEee-----cCCCcCceeeeeeecc
Q psy15157 302 LSSGKDSLVKLWELSSARCLIAYT-----GAGSMGQQFELTLTVD 341 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 341 (344)
++++.||.|++||+++++.+..+. +|... ...+.++++
T Consensus 228 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~ 270 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST--VWQVRHLPQ 270 (357)
T ss_dssp EEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC--EEEEEEETT
T ss_pred EEECCCCeEEEEeCcCCCcccceeeeccCCCcCC--EEEEEECCC
Confidence 999999999999999988766665 66544 344445544
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=215.01 Aligned_cols=201 Identities=16% Similarity=0.207 Sum_probs=163.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC---ccccccCCCCCCcCCCCCCceEEEec--C--CcCCeEEEE--E
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR---MLAKSSMESSEPQNDQQGHPVIRTLY--D--HIEEVTCLE--F 187 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~--h~~~v~~~~--~ 187 (344)
+|.+.|++++|+|++++|++|+.||+|++||++. +..... .....+..+. . +...+.++. +
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKF----------LNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEE----------EEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeec----------cccceeEEEEccCcccccCceEEEEEE
Confidence 6999999999999999999999999999999952 111000 0001122221 2 566788887 6
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
++++.+|++|+.||.|++||+++++....+....|...|++++|+|++.++++|+.|+.+++|
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 688999999999999999999998766555443377899999999999999999999999999
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC------------------------CCccEEEEEEc
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH------------------------DGAEISSLTFT 295 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~v~~i~~~ 295 (344)
++++.++++|+.||.|++||+++++++..+..+. +...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 3567799999999999999999999887765321 23468999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 296 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
++++|++|+.||.|++||+.+++++..+.+|.
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred -CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 78999999999999999999999999998864
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.5e-26 Score=234.13 Aligned_cols=209 Identities=23% Similarity=0.378 Sum_probs=177.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|+|+++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+|+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 668 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET------------------GEKLLDIKAHEDEVLCCAFSSD 668 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEECTT
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CCEEEEeccCCCCEEEEEEecC
Confidence 3456789999999999999999999999999999999954 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.||.|++||+.+++....+ ..|...|.+++|+| ++.++++|+.|+.+++|
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v 746 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVHTY--DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV 746 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEE--cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE
Confidence 999999999999999999998665443 46788899999999 55688999999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec--------------------------------------------
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-------------------------------------------- 281 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------------------------------------- 281 (344)
+|++.++++++.||.|++||+.+++....+.
T Consensus 747 ~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~ 826 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDI 826 (1249)
T ss_dssp EEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEET
T ss_pred EEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEe
Confidence 6889999999999999999988775543321
Q ss_pred ----------ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 282 ----------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 282 ----------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..|. ..|.+++|+|+++++++++.||.|++||+.++..+..+.+|..... .+.+++++
T Consensus 827 ~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~--~v~~spdg 894 (1249)
T 3sfz_A 827 HTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH--GVMFSPDG 894 (1249)
T ss_dssp TTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE--EEEECTTS
T ss_pred cCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE--EEEECCCC
Confidence 1232 4689999999999999999999999999999999999998876544 44444443
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=7.8e-27 Score=205.58 Aligned_cols=188 Identities=16% Similarity=0.239 Sum_probs=160.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++++|++++.||.|++||+.+.. ......+..|...|.+++|+|+
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT----------------WKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE----------------EEEEEECCCCSSCEEEEEECTT
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe----------------eeeeEEeecCCCceeEEEECCC
Confidence 455678999999999999999999999999999999996421 1223445789999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcccccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEEc-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS----------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~----------------- 251 (344)
+++|++++.||.|++||++.+....... ...|...|.+++|+|++.++++++.++.+++|+
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccccc
Confidence 9999999999999999998875321111 234678899999999999999999999998884
Q ss_pred ------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 252 ------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 252 ------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
|++.++++++.|+.|++||+++++.+..+.. +. ..|.+++|+|++++|++| .|
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~-~d 264 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ET-LPLLAVTFITESSLVAAG-HD 264 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SS-CCEEEEEEEETTEEEEEE-TT
T ss_pred ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc-CC-CCeEEEEEecCCCEEEEE-eC
Confidence 4677899999999999999999999888873 43 469999999999988877 89
Q ss_pred CcEEEEEcCC
Q psy15157 308 SLVKLWELSS 317 (344)
Q Consensus 308 g~i~vwd~~~ 317 (344)
+.|++|++++
T Consensus 265 ~~i~i~~~~~ 274 (372)
T 1k8k_C 265 CFPVLFTYDS 274 (372)
T ss_dssp SSCEEEEEET
T ss_pred CeEEEEEccC
Confidence 9999999988
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=6.6e-27 Score=211.08 Aligned_cols=210 Identities=10% Similarity=0.136 Sum_probs=158.0
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+|.+.|++++|+| ++++|+||+.||+|++||+++.. .........+...+.+++|+|++.
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI----------------LRVFASSDTINIWFCSLDVSASSR 222 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE----------------EEEEECCSSCSCCCCCEEEETTTT
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc----------------eeEEeccCCCCccEEEEEECCCCC
Confidence 4568999999999998 78999999999999999986321 111122233455688999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE---------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~--------------------- 250 (344)
+|++|+.||.|++||++... . .....|...|.+++|+|++. ++++|+.|+.|++|
T Consensus 223 ~l~~g~~dg~i~~wd~~~~~-~--~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v 299 (435)
T 4e54_B 223 MVVTGDNVGNVILLNMDGKE-L--WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPV 299 (435)
T ss_dssp EEEEECSSSBEEEEESSSCB-C--CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCE
T ss_pred EEEEEeCCCcEeeeccCcce-e--EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccc
Confidence 99999999999999997543 2 33356788999999999876 67789999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC----CccEEEEEEccCCCEEEEEe------------CCCc
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD----GAEISSLTFTRNGKYLLSSG------------KDSL 309 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~s~~------------~dg~ 309 (344)
+|+|.+|++++.||.|++||+.+++....+..+.. ...+..+.|+|++.++++++ +++.
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 379 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT 379 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE
Confidence 68999999999999999999999887666542211 01233456777777666654 3467
Q ss_pred EEEEEcCCCeeEEEeecC-CCcCceeeeeeeccCC
Q psy15157 310 VKLWELSSARCLIAYTGA-GSMGQQFELTLTVDAD 343 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 343 (344)
|++||..+++++..+.++ ...... ...|++++.
T Consensus 380 i~iwd~~~g~~~~~l~~~~~~~v~s-~~~fspdg~ 413 (435)
T 4e54_B 380 IDVFDGNSGKMMCQLYDPESSGISS-LNEFNPMGD 413 (435)
T ss_dssp EEEECSSSCCEEEEECCSSCCCCCC-EEEECTTSS
T ss_pred EEEEECCCCcEEEEEeCCCCCcEEE-EEEECCCCC
Confidence 999999999999887644 333222 223555554
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1.1e-26 Score=218.04 Aligned_cols=204 Identities=15% Similarity=0.163 Sum_probs=170.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcC--CCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHP--SAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~ 192 (344)
..|.+.|++++|+|+|++|++++ ++.|+|||+.++. ........+.+|... |++++|+| +++
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~--------------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~ 79 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGD--------------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 79 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSC--------------CSSCSEEEECTTTTSCEEEEEECSSTTCC
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCC--------------CccccceEEecCCCceEEEEEECcCCCCC
Confidence 36889999999999999999998 8899999986310 011467888999999 99999999 999
Q ss_pred EEEEEeCCCcEEEEEcCCC------ccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE------------
Q psy15157 193 ILASGSKDKTVKMFDYSKS------SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY------------ 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~------------ 250 (344)
+|++|+.||.|++||+.++ ..........+...|.+++|+|+++++++++.+ +.+.+|
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 159 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH 159 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC
T ss_pred EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecC
Confidence 9999999999999999755 222333444578889999999999999999987 577665
Q ss_pred ---------cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCc---cEEEEEEccC-CCEEEEEeCCCcEEEEEcC
Q psy15157 251 ---------SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA---EISSLTFTRN-GKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ---------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~ 316 (344)
+|++. .+++++.|+.|++||..+++.+..+.. |. . .|.+++|+|+ +++|++++.||.|++||++
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT-HH-KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS-SS-CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc-cC-CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 66776 899999999999999999999888863 43 3 6999999999 9999999999999999999
Q ss_pred CCeeEEEe-e---cCCCcCceeee
Q psy15157 317 SARCLIAY-T---GAGSMGQQFEL 336 (344)
Q Consensus 317 ~~~~~~~~-~---~~~~~~~~~~~ 336 (344)
+++.+..+ . +|......+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSW 261 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEE
Confidence 99999999 5 66555444443
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.6e-26 Score=205.49 Aligned_cols=218 Identities=14% Similarity=0.236 Sum_probs=163.9
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc----CCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 115 VTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDV----DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
...|.+.|++++|+|+++ +||+|+.||.|++|++ .++........ ...............+|.+.|++++|+|
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTI--IAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEE--EEEEECCCCCC------CBCEEEEEECT
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccc--cccccccccccccccCCCCceEEEEEcC
Confidence 356779999999999999 9999999999999999 54321000000 0000000000011223788999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
++++|++|+.||.|++|| .+++.. .....|...|.+++|+|+++++++++.++.+++|
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 999999999999999999 344333 2334578889999999999999999999888877
Q ss_pred ------------------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 251 ------------------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 251 ------------------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+++++++++++.|+.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 46778899999999999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+++++.+..+. .|. ..|.+++|+|++ +|++++.|+.|++||+++++.+..+..|.... ..+.+++++
T Consensus 276 ~~~~~~~~~~~-~~~-~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i--~~~~~s~~~ 342 (425)
T 1r5m_A 276 GGNGNSQNCFY-GHS-QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI--FAGRISQDG 342 (425)
T ss_dssp SSSBSCSEEEC-CCS-SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE--EEEEECTTS
T ss_pred CCCCccceEec-CCC-ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE--EEEEEcCCC
Confidence 99988877775 343 479999999999 99999999999999999999999999876543 444555554
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=9.4e-27 Score=207.83 Aligned_cols=194 Identities=21% Similarity=0.325 Sum_probs=155.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|.+++| +++++++|+.||.|++||+.. .......+.+|.+.|.+++|+|+
T Consensus 168 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI-----------------ANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS-----------------SSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc-----------------CcceeeEEcCCCCCeeEEEEcCC
Confidence 34556799999999999 578999999999999999962 24567788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEe--CCCEEEEE-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGT--DHFVLRLY----------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~--~~~~i~~~----------------- 250 (344)
+.+|++|+.||.|++||+++++... ....+...|.+++|+|++..+ ++++ .++.+++|
T Consensus 229 ~~~l~s~~~d~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v 306 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDARSSIPKF--TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV 306 (401)
T ss_dssp SSEEEEEETTSCEEEEETTCSSEEE--EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE
T ss_pred CCEEEEEeCCCeEEEccCCCCCccE--EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 9999999999999999999875443 334577889999999977555 4544 69999998
Q ss_pred -----cCCCCEEEE--EeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 -----SSDGRIYCS--GSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 -----~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++++.++++ |+.||.|++||+.+++...... ..|. ..|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 688999999 4589999999999976655433 2343 579999999999999999999999999999998877
Q ss_pred Eeec
Q psy15157 323 AYTG 326 (344)
Q Consensus 323 ~~~~ 326 (344)
....
T Consensus 386 ~~~~ 389 (401)
T 4aez_A 386 RPIP 389 (401)
T ss_dssp ----
T ss_pred cccc
Confidence 6543
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=4.9e-27 Score=206.96 Aligned_cols=159 Identities=13% Similarity=0.099 Sum_probs=128.1
Q ss_pred CcCCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----
Q psy15157 178 HIEEVTCLEFHPSAPILASG--SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----- 250 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----- 250 (344)
+...+.+++|+|||++++++ +.|++|+|||+.+++.... ..+...|.+++|+|+|+++++++.++.+.+|
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~---~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE---IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE---EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCC
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE---eCCCCceEEEEEccCCceEEeccceeEEEEEeccCc
Confidence 34458899999999987654 4789999999998765433 3466789999999999999999988777665
Q ss_pred -------------------cCCCCEEEEEeCCC----cEEEEeCCCCeEE----eeecccCCCccEEEEEEccCCCEEEE
Q psy15157 251 -------------------SSDGRIYCSGSKDG----DIKIWDGVSSKCV----ATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
+|++.++++++.|+ .+++||....... ..+. .|. ..|++++|+|+|++|++
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~-~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRF-KGITSMDVDMKGELAVL 286 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSC-SCEEEEEECTTSCEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCC-CCeEeEEECCCCCceEE
Confidence 68899999999887 6889998776542 2333 343 46999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEe-ecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSARCLIAY-TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.|++|+|||+++++++..+ .+|... ..++.|++|+.
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~--V~~v~fSpdg~ 325 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAHSFA--ITEVTISPDST 325 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSSSSC--EEEEEECTTSC
T ss_pred EcCCCEEEEEECCCCcEEEEecCcccCC--EEEEEECCCCC
Confidence 999999999999999999986 577654 55667777764
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=6.8e-27 Score=210.66 Aligned_cols=221 Identities=19% Similarity=0.277 Sum_probs=173.1
Q ss_pred cceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.......+|.+.|++++|+|+ +.+|++|+.||.|++|++.+...... ..........+.+|...|.+++|+
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--------~~~~~~~~~~~~~h~~~v~~l~~~ 190 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--------PSGECQPDLRLRGHQKEGYGLSWN 190 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--------TTCCCCCSEEEECCSSCCCCEEEC
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--------ccccCCCcEEecCCCCCeEEEEeC
Confidence 344556789999999999997 78999999999999999964211100 011244567788999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEcCCCcccc-----ceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-----------
Q psy15157 189 PSAP-ILASGSKDKTVKMFDYSKSSVRK-----AHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 189 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~----------- 250 (344)
|++. +|++|+.||.|++||+.++.... ......|...|.+++|+| ++.++++++.++.|++|
T Consensus 191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 9988 99999999999999998743211 223346778899999999 78899999999999998
Q ss_pred ---------------cCCCC-EEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEE
Q psy15157 251 ---------------SSDGR-IYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKL 312 (344)
Q Consensus 251 ---------------~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~v 312 (344)
+|++. ++++|+.||.|++||+++ ...+..+. .|. ..|.+++|+|+++ +|++++.||.|++
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~-~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHK-DEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCS-SCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCC-CCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 56665 789999999999999998 45566665 344 4799999999985 6899999999999
Q ss_pred EEcCC--------------CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 313 WELSS--------------ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 313 wd~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
||+.. .+.+..+.+|.... ..+.+++++
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~p~~ 390 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI--SDFSWNPNE 390 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE--EEEEECSSS
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCc--eEEEECCCC
Confidence 99987 36677777776544 444455544
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=210.15 Aligned_cols=212 Identities=12% Similarity=0.180 Sum_probs=159.5
Q ss_pred eeEEecCC------------CceEEEEECCCC--CEEEEEeCCCeEEEEEcCCccccccCCCCCC---------cCCCCC
Q psy15157 112 TAYVTSHK------------SPCRAGAFSIDG--QLCATGSVDASIKILDVDRMLAKSSMESSEP---------QNDQQG 168 (344)
Q Consensus 112 ~~~~~~h~------------~~v~~~~~s~~~--~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~---------~~~~~~ 168 (344)
...+.+|. +.|++++|+|++ .+|++++.|++|++||+.+............ ......
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 55678998 889999999998 7999999999999999975432110000000 000000
Q ss_pred C------------ceEEE-ecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-cccce-----eeeccccceEEE
Q psy15157 169 H------------PVIRT-LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VRKAH-----KTIQESTFVRCL 229 (344)
Q Consensus 169 ~------------~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~-----~~~~~~~~v~~~ 229 (344)
. ..... ..+|...|.+++|+|++++|++| .||.|++||+++.. ....+ ....|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 232 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA 232 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEE
Confidence 0 11122 46899999999999999999998 79999999998432 22211 234577889999
Q ss_pred EEecCC-CEEEEEeCCCEEEEE---------------------------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 230 SFHPCG-DYMVVGTDHFVLRLY---------------------------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 230 ~~~~~~-~~l~~~~~~~~i~~~---------------------------------------~~~~~~l~~~~~dg~i~iw 269 (344)
+|+|++ .++++|+.|+.|++| +|+|++|++++. +.|++|
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 999998 999999999999998 357889999998 999999
Q ss_pred eCCC-CeEEeeecccCCCc--------------cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 270 DGVS-SKCVATFSKAHDGA--------------EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 270 d~~~-~~~~~~~~~~~~~~--------------~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|+++ ++++..+.. |... .+..++|+|++++|++|+.||.|++||+.+++.+ .+.++
T Consensus 312 d~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~ 382 (447)
T 3dw8_B 312 DLNMENRPVETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEAS 382 (447)
T ss_dssp ETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECC
T ss_pred eCCCCccccceeec-cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeec
Confidence 9997 777777753 3210 0334899999999999999999999999999876 44433
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.9e-27 Score=212.79 Aligned_cols=200 Identities=16% Similarity=0.234 Sum_probs=163.3
Q ss_pred ceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.|++++|+|+ +++|++|+.||.|++||+.+....... ........+..|...|.+++|+|
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN---------YTPLTPGQSMSSVDEVISLAWNQ 175 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT---------CCCBCCCCSCCSSCCCCEEEECS
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc---------ccccccccccCCCCCeeEEEeCC
Confidence 45567899999999999998 899999999999999999753210000 00111223467999999999999
Q ss_pred C-CCEEEEEeCCCcEEEEEcCCCccccceeeec----cccceEEEEEecCC-CEEEEEeCCC---EEEEE----------
Q psy15157 190 S-APILASGSKDKTVKMFDYSKSSVRKAHKTIQ----ESTFVRCLSFHPCG-DYMVVGTDHF---VLRLY---------- 250 (344)
Q Consensus 190 ~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-~~l~~~~~~~---~i~~~---------- 250 (344)
+ +.+|++++.||.|++||+++++....+.... +...+.+++|+|++ .++++++.++ .+++|
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 9 6899999999999999999876544443211 16789999999997 6899999998 89888
Q ss_pred ---------------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC-CEEEEEeCCCcEEEE
Q psy15157 251 ---------------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 ---------------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vw 313 (344)
+| ++.++++++.|+.|++||+++++.+..+. .|. ..|.+++|+|++ .+|++++.||.|++|
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~-~~v~~~~~s~~~~~~l~s~~~d~~i~iw 333 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP-ARG-NWCFKTKFAPEAPDLFACASFDNKIEVQ 333 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE-CSS-SCCCCEEECTTCTTEEEECCSSSEEEEE
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec-CCC-CceEEEEECCCCCCEEEEEecCCcEEEE
Confidence 56 88999999999999999999999998887 343 469999999999 899999999999999
Q ss_pred EcCCCeeE
Q psy15157 314 ELSSARCL 321 (344)
Q Consensus 314 d~~~~~~~ 321 (344)
|+.++...
T Consensus 334 ~~~~~~~~ 341 (416)
T 2pm9_A 334 TLQNLTNT 341 (416)
T ss_dssp ESCCCCCS
T ss_pred EccCCCCC
Confidence 99887643
No 96
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.1e-27 Score=213.29 Aligned_cols=208 Identities=13% Similarity=0.141 Sum_probs=146.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-------
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP------- 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------- 189 (344)
.|...+....+++++.++++|+.|++|+|||..+..... ...+..+.+|.+.|++++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~-------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~ 153 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIIT-------------QHVLGGKSGHHNFVNDIDIADVYSADNR 153 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEE-------------EEEECTTTSCSSCEEEEEEEEEECTTCS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccce-------------eeeecccCCCCCceEEEEEccccccccC
Confidence 344444444555667799999999999999986432111 123445789999999999998
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-----------------
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~----------------- 250 (344)
++++|+||+.|++|+|||++++... .....+...+.+++|+|++. +|++++.|+.|++|
T Consensus 154 ~d~~~las~s~D~tv~~Wd~~~~~~~--~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 154 LAEQVIASVGDDCTLIIWRLTDEGPI--LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEEEEEEEEETTSEEEEEEEETTEEE--EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred CCCCEEEEEECCCeEEEEECCCCcee--eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 7889999999999999999876533 34456778899999999875 79999999999999
Q ss_pred --------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE--------
Q psy15157 251 --------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS-------- 290 (344)
Q Consensus 251 --------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-------- 290 (344)
.+++..+++++.|+.+++||+.+++....+..+. ..+.
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~--~~~~~~~~~~~~ 309 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDST--MKLGPKNLLPNV 309 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeec--CccccEEEcccc
Confidence 2789999999999999999998876655443211 1122
Q ss_pred ----------EEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 291 ----------SLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 291 ----------~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
...|+| ++.++++|+.||.|++||+.+++++..+.+|... ..++.|++|+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~--V~svafspdG~ 372 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP--IVDFCWHQDGS 372 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC--EEEEEECTTSS
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc--EEEEEEcCCCC
Confidence 223333 3446778889999999999999999888877654 56677888775
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=3.7e-26 Score=203.59 Aligned_cols=209 Identities=18% Similarity=0.221 Sum_probs=161.3
Q ss_pred cCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCC--------------------------CCCcCCCCCC
Q psy15157 117 SHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMES--------------------------SEPQNDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~--------------------------~~~~~~~~~~ 169 (344)
+|...|++++|+| ++++|++++.||.|++||+.+......... .....+....
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 5999999999999 788999999999999999986433211110 0011223345
Q ss_pred ceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccc-cce-------------eeeccccceEEEEEecC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVR-KAH-------------KTIQESTFVRCLSFHPC 234 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~-~~~-------------~~~~~~~~v~~~~~~~~ 234 (344)
.....+..|...|.+++|+|++. +|++|+.||.|++||++++... ..+ ....+...|.+++|+|+
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 56677889999999999999998 6999999999999999876411 111 11346788999999999
Q ss_pred CCEEEEEeCCCEEEEEcCC----------------------------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 235 GDYMVVGTDHFVLRLYSSD----------------------------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 235 ~~~l~~~~~~~~i~~~~~~----------------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
+.++++++.|+.+++|+.. +..+++++.|+.|++||+.+++.+..+. .|.
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~- 334 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK-GHY- 334 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC-CCS-
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec-cCC-
Confidence 9999999999999999432 3567778889999999999999998886 444
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..|.+++|+|++++|++++.||.|++||+.+++.+......
T Consensus 335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 335 KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEECC----------
T ss_pred CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce
Confidence 47999999999999999999999999999999887765543
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=2.2e-27 Score=209.90 Aligned_cols=220 Identities=11% Similarity=0.095 Sum_probs=161.1
Q ss_pred CCCCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA 153 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~ 153 (344)
..++.++|....++.++.+-.. ..+.... .......+.+|.+.|++++|+|++++|++|+.|++|++||+.+..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~- 88 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGN----GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG- 88 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETT----EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCC----ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-
Confidence 4455666666666665433111 1111100 002334567999999999999999999999999999999997421
Q ss_pred cccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccc-eeeec-cccceEEEEE
Q psy15157 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA-HKTIQ-ESTFVRCLSF 231 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~-~~~~v~~~~~ 231 (344)
.......+.+|...|.+++|+|++++|++|+.|+.|++||+++++.... ..... |...|.+++|
T Consensus 89 --------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 89 --------------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp --------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred --------------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 1235677888999999999999999999999999999999988753111 22233 7889999999
Q ss_pred ecCCCEEEEEeCCCEEEEEc----------------------------------------CCCCEEEEEeCCCcEEEEeC
Q psy15157 232 HPCGDYMVVGTDHFVLRLYS----------------------------------------SDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 232 ~~~~~~l~~~~~~~~i~~~~----------------------------------------~~~~~l~~~~~dg~i~iwd~ 271 (344)
+|+++++++++.|+.+++|+ |++++|++++.||.|++||+
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEE
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 99999999999999998874 57888999999999999999
Q ss_pred CCCeE----EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 272 VSSKC----VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 272 ~~~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.+++. +..+. .|. ..|.+++|+|++++|++|+.++.+ +|+..
T Consensus 235 ~~~~~~~~~~~~~~-~~~-~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 235 SAPEQPPRALITVK-LSQ-LPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CSTTSCEEECCCEE-CSS-SCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCCcceeeEeec-CCC-CceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99876 55665 343 469999999999999998866665 67665
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-26 Score=206.55 Aligned_cols=205 Identities=17% Similarity=0.132 Sum_probs=159.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCcc---ccccCCCCCC--------------------cC------------
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRML---AKSSMESSEP--------------------QN------------ 164 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~---~~~~~~~~~~--------------------~~------------ 164 (344)
.++.+++|+++|++|+++ .++.|++||+.++. .......... ..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 588999999999976666 57899999998765 2211110000 00
Q ss_pred ----CCCCCceEEEecCCcCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcC--CCccccceeeeccccceEEEEEecCCCE
Q psy15157 165 ----DQQGHPVIRTLYDHIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYS--KSSVRKAHKTIQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 165 ----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 237 (344)
............+|.+.|.+++|+|++++| ++|+.||.|++||+. +++....+....+...|.+++|+|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 000000112234677789999999999986 899999999999998 7766555544456788999999999999
Q ss_pred EEEEeCCCEEEEE---------------------------cCC---CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 238 MVVGTDHFVLRLY---------------------------SSD---GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 238 l~~~~~~~~i~~~---------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
|++|+.++.+.+| +|+ +++|++|+.|+.|++||+++++.+..+...|. .
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~-~ 242 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK-H 242 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS-S
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC-C
Confidence 9999999988876 677 88999999999999999999988877554555 4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|.+++|+ ++++|++++.|+.|++||+++++++..+..+
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 79999999 9999999999999999999999999998754
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=3.9e-26 Score=203.41 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=159.1
Q ss_pred eEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-----EecCCcCCeEEEE
Q psy15157 113 AYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-----TLYDHIEEVTCLE 186 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~ 186 (344)
..+.+|.+.|++++|+| ++++|++|+.||.|++||+.+........ ..... ...+|...|.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYT----------CKAVCSIGRDHPDVHRYSVETVQ 106 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEE----------ECEEEEECTTCTTCCSSCEEEEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEe----------ccccccccccccccCCCcEEEEE
Confidence 34678999999999999 99999999999999999997532211100 00000 1135999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC---CCEEEEEeCCCEEEEE------------
Q psy15157 187 FHP-SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 187 ~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~------------ 250 (344)
|+| ++.+|++++.||.|++||+.+++....+ .+...+.++.+++. +.++++++.++.+.+|
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF---NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceec---cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 999 7779999999999999999987654333 35677899999985 4599999999999998
Q ss_pred -----------cCCCC-EEEEEeCCCcEEEEeCCCCe-EEeeec--------------ccCCCccEEEEEEccCCCEEEE
Q psy15157 251 -----------SSDGR-IYCSGSKDGDIKIWDGVSSK-CVATFS--------------KAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 -----------~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~~--------------~~~~~~~v~~i~~~~~~~~l~s 303 (344)
+|++. ++++|+.||.|++||++++. .+..+. ..|. ..|.+++|+|++++|++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN-GKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS-SCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc-CceeEEEEcCCCCEEEE
Confidence 67777 58999999999999998765 222221 1333 57999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 304 SGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++.||.|++||+++++....+.++
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~ 286 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGK 286 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCC
T ss_pred ecCCCeEEEEECCCCccceecccc
Confidence 999999999999998876655443
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5.2e-27 Score=208.91 Aligned_cols=180 Identities=14% Similarity=0.158 Sum_probs=145.7
Q ss_pred EecCCCceEEEEECC--------CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 115 VTSHKSPCRAGAFSI--------DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~--------~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
+.+|.+.|++++|+| |+++||||+.|++|+|||+.+ ......+..|...|.+++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~------------------~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD------------------EGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET------------------TEEEEEEEECSSCEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC------------------CceeeeecCCCCCcEEEE
Confidence 579999999999997 889999999999999999853 345666778999999999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEEcCCCccccce-----------------------eeeccccceEEEEEe-cCCCEEEEE
Q psy15157 187 FHPSAP-ILASGSKDKTVKMFDYSKSSVRKAH-----------------------KTIQESTFVRCLSFH-PCGDYMVVG 241 (344)
Q Consensus 187 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-----------------------~~~~~~~~v~~~~~~-~~~~~l~~~ 241 (344)
|+|++. +|++|+.||+|++||+++++..... ....+...+.++.|+ +++..++++
T Consensus 194 ~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~ 273 (393)
T 4gq1_A 194 FRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM 273 (393)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE
T ss_pred ECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE
Confidence 999875 8999999999999999886532211 112345667888887 799999999
Q ss_pred eCCCEEEEEc-------------------------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 242 TDHFVLRLYS-------------------------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 242 ~~~~~i~~~~-------------------------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
+.|+.+++|+ .++.++++|+.||.|++||..+++...
T Consensus 274 s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 274 CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 9999999991 244567888999999999999998877
Q ss_pred eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
....++ .+|.+++|+|||++|++++++| +.+|.+
T Consensus 354 ~~~~~~--~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 354 IPIQLG--MPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEECS--SCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EecCCC--CcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 765433 4799999999999999999776 555554
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=2.1e-25 Score=202.72 Aligned_cols=190 Identities=21% Similarity=0.360 Sum_probs=161.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc--
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH-- 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-- 188 (344)
....+.+|.+.|++++|++++ ++++|+.||+|++||+.+ ......+.+|.+.|.+++|+
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~l~~~~~ 214 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK------------------GCCTHVFEGHNSTVRCLDIVEY 214 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEEEES
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC------------------CcEEEEECCCCCccEEEEEecC
Confidence 455678999999999999988 999999999999999964 45677889999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCcccc---------------------ceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRK---------------------AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
+++.++++|+.||.|++||+.++.... ......|...+.++ ++++.++++|+.|+.+
T Consensus 215 ~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 215 KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTL 292 (464)
T ss_dssp SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCE
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeE
Confidence 577899999999999999998765322 11223455666665 6789999999999999
Q ss_pred EEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 248 RLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 248 ~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
++| ++++.++++|+.||.|++||+++++++..+.. |. ..|.++.|+ +++|+++
T Consensus 293 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~-~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 293 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HT-ALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC-CS-SCEEEEEEC--SSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-CC-CcEEEEEEc--CCEEEEE
Confidence 998 68899999999999999999999999988874 44 469999997 6899999
Q ss_pred eCCCcEEEEEcCCCeeEEEee
Q psy15157 305 GKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.||.|++||+++++....+.
T Consensus 369 s~dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 369 AADGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp ETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCcEEEEECCCCceeeeec
Confidence 999999999999988776664
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=1.2e-25 Score=210.96 Aligned_cols=237 Identities=14% Similarity=0.188 Sum_probs=184.9
Q ss_pred cCCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCc-eEEEEECC--CCCEEEEEeCCCeEEEEEcCC
Q psy15157 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSP-CRAGAFSI--DGQLCATGSVDASIKILDVDR 150 (344)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~ 150 (344)
...++.++|....++..........+.... .........+.+|.+. |++++|+| ++++|++|+.||.|++||+.+
T Consensus 20 ~v~~~~~spdg~~l~~~~~~~v~v~~~~~~--~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDG--DSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSS--CCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEECCCC--CCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 344566777666655544222222222211 1111345678899999 99999999 999999999999999999953
Q ss_pred ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccce
Q psy15157 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFV 226 (344)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v 226 (344)
+.... .........+..|...|.+++|+|++++|++++.+ +.|++||. ++.. .....|...|
T Consensus 98 ~~~~~----------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~--~~~~~~~~~v 163 (615)
T 1pgu_A 98 DKESN----------SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSL--GEVSGHSQRI 163 (615)
T ss_dssp EGGGT----------EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEE--EECCSCSSCE
T ss_pred Ccccc----------cccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCcc--eeeecCCccE
Confidence 21000 00234567788899999999999999999999988 78999983 3322 3334678899
Q ss_pred EEEEEecCCC-EEEEEeCCCEEEEE--------------------------cCC-CCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 227 RCLSFHPCGD-YMVVGTDHFVLRLY--------------------------SSD-GRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 227 ~~~~~~~~~~-~l~~~~~~~~i~~~--------------------------~~~-~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.+++|+|++. .+++++.++.+++| +|+ ++++++++.||.|++||+++++.+.
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 9999999998 79999999999998 567 8999999999999999999999988
Q ss_pred eecc---cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 279 TFSK---AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 279 ~~~~---~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.+.. .|. ..|.+++|+ ++++|++++.|+.|++||+++++++..+..+.
T Consensus 244 ~~~~~~~~~~-~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 294 (615)
T 1pgu_A 244 YIEDDQEPVQ-GGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDK 294 (615)
T ss_dssp ECCBTTBCCC-SCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred EecccccccC-CceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 8843 444 479999999 99999999999999999999999999998873
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.6e-26 Score=222.15 Aligned_cols=193 Identities=19% Similarity=0.252 Sum_probs=163.7
Q ss_pred ceeEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|.+.|++++|+++ +++|++|+.||.|++||+.++ .......+.+|...|++++|+
T Consensus 45 ~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~----------------~~~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------------RWSQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEEC
T ss_pred cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC----------------cccccccccCCCCCeEEEEEC
Confidence 44567899999999999987 999999999999999998642 123567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-------------CCCEEEEEeCCCEEEEE---
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-------------CGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~~--- 250 (344)
|+ +..+++|+.||.|++||++++..........+...|.+++|+| ++.++++|+.|+.|++|
T Consensus 109 p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 109 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 99 9999999999999999999886555566667888999999999 58999999999999998
Q ss_pred ------------------------cCC---CCEEEEEeCCCcEEEEeCCCCeEEe---eecccCCCccEEEEEEccCCCE
Q psy15157 251 ------------------------SSD---GRIYCSGSKDGDIKIWDGVSSKCVA---TFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 ------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.++++|+.||.|++||++++.... ..........|++++|+|+|++
T Consensus 189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE
Confidence 677 8999999999999999998864211 1111122357999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|++|+.||.|++||+.++.
T Consensus 269 l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 269 LALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEECSSSCEECCBCCSSS
T ss_pred EEEEcCCCEEEEEecCCCC
Confidence 9999999999999998643
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=5.2e-25 Score=197.76 Aligned_cols=200 Identities=17% Similarity=0.291 Sum_probs=154.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.++.|+||++ ++||+|. |++|+|||..++. ......+.+|...|++|+|+|++++|++|+.|
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~----------------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGD----------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCC----------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCC----------------EEEEEEecCCCCcEEEEEECCCCCEEEEEECC
Confidence 3678999975 5777775 9999999996531 11233456788899999999999999999999
Q ss_pred CcEEEEEcCCCccccce---------------------------------------eeeccccceEEEEEecCCCEEEEE
Q psy15157 201 KTVKMFDYSKSSVRKAH---------------------------------------KTIQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~---------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
|+|++||+.+++....+ ....|...+..+.++|++.+++++
T Consensus 169 g~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeee
Confidence 99999999876533221 112345567778888888888888
Q ss_pred eCCCEEEEE---------------------------cC-CCCEEEE--EeCCCcEEEEeCCCCeEEeeecccCCCccEEE
Q psy15157 242 TDHFVLRLY---------------------------SS-DGRIYCS--GSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291 (344)
Q Consensus 242 ~~~~~i~~~---------------------------~~-~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 291 (344)
+.|+.+++| +| ++.++++ |+.|+.|++||+.++++...+.. + ..+.+
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~--~~v~~ 325 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-H--SQVCS 325 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-S--SCEEE
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-c--cceee
Confidence 888888887 22 3345554 45799999999999998888763 3 35899
Q ss_pred EEEccCCCEEEEEe--CCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 292 LTFTRNGKYLLSSG--KDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 292 i~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.|+|+++.+++++ .|+.|+|||+.+++++.++.+|... ...+.+++|+.
T Consensus 326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~--V~~l~~spdg~ 377 (420)
T 4gga_A 326 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGA 377 (420)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSS
T ss_pred eeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCC
Confidence 99999999988765 7999999999999999999998754 55566777664
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.8e-25 Score=201.62 Aligned_cols=198 Identities=22% Similarity=0.452 Sum_probs=168.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++| +++++++|+.||+|++||+.+ ...+..+.+|...|.+++|++
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~l~~~~- 223 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT------------------GEMLNTLIHHCEAVLHLRFNN- 223 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS------------------CCEEEEECCCCSCEEEEECCT-
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC------------------CcEEEEEcCCCCcEEEEEEcC-
Confidence 34567899999999999 789999999999999999964 456778889999999999974
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------ 251 (344)
..+++|+.||.|++||+.++..... .....|...|.+++| +++++++|+.|+.+++|+
T Consensus 224 -~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 300 (435)
T 1p22_A 224 -GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 300 (435)
T ss_dssp -TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred -CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence 5999999999999999988764322 233457788999999 789999999999999992
Q ss_pred ---CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe---------
Q psy15157 252 ---SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR--------- 319 (344)
Q Consensus 252 ---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~--------- 319 (344)
.++.++++|+.||.|++||+++++++..+. .|. ..|.+++| ++++|++|+.||.|++||+++++
T Consensus 301 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 301 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE-GHE-ELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCc-CcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 356889999999999999999999998887 344 46999998 78999999999999999998877
Q ss_pred eEEEeecCCCcCceeee
Q psy15157 320 CLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 320 ~~~~~~~~~~~~~~~~~ 336 (344)
++..+.+|......+.+
T Consensus 377 ~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp EEEEECCCSSCCCCEEE
T ss_pred heeeccCCCCCeEEEEe
Confidence 88999988776655543
No 107
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=5.3e-25 Score=189.65 Aligned_cols=197 Identities=18% Similarity=0.314 Sum_probs=139.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE--EecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR--TLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
+++|+||+++ +||+| .|++|+|||+.+ ++.+. .+.+|...|++++|+|++++|++|+.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~t------------------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~ 87 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASS------------------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS 87 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTT------------------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCC------------------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC
Confidence 5789999875 77776 599999999964 23333 44678889999999999999999999
Q ss_pred CCcEEEEEcCCCcccccee---------------------------------------eeccccceEEEEEecCCCEEEE
Q psy15157 200 DKTVKMFDYSKSSVRKAHK---------------------------------------TIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~---------------------------------------~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
||+|++||+++++....+. ...|...+.++.++++++++++
T Consensus 88 Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEE
Confidence 9999999998875433221 1123444556666666666666
Q ss_pred EeCCCEEEEEc---------------------------CCC-C--EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 241 GTDHFVLRLYS---------------------------SDG-R--IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 241 ~~~~~~i~~~~---------------------------~~~-~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
++.|+.+++|+ +++ . .+++++.++.|++||........... .. ..+.
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~--~~v~ 244 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AH--SQVC 244 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CS--SCEE
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ce--eeee
Confidence 66666666661 111 1 12345556666666666655544443 12 3588
Q ss_pred EEEEccCCCEEEEEe--CCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 291 SLTFTRNGKYLLSSG--KDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+.|+|+++.+++++ .|+.|++||+++++++.++.+|... ..++.+++++.
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~--V~~l~~spdg~ 297 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGA 297 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSS
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCC
Confidence 999999999887754 7999999999999999999998765 44555666654
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=4.3e-26 Score=203.57 Aligned_cols=207 Identities=17% Similarity=0.251 Sum_probs=162.3
Q ss_pred ceEEEEECCCCCE-EEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEEEe
Q psy15157 121 PCRAGAFSIDGQL-CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~~~~-l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~ 198 (344)
....++++|+... +++++.||.|+||++.+.... ......+.+|.+.|++++|+| ++.+|++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~--------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 101 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV--------------DKNVPLVCGHTAPVLDIAWCPHNDNVIASGS 101 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC--------------CTTCCCBCCCSSCEEEEEECTTCTTEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC--------------CCCCceEecCCCCEEEEEeCCCCCCEEEEEe
Confidence 4456888887654 446889999999998632110 122345778999999999999 899999999
Q ss_pred CCCcEEEEEcCCCcc-----ccceeeeccccceEEEEEecCC-CEEEEEeCCCEEEEE----------------------
Q psy15157 199 KDKTVKMFDYSKSSV-----RKAHKTIQESTFVRCLSFHPCG-DYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~~---------------------- 250 (344)
.||+|++||+.++.. ........|...|.+++|+|++ .++++++.|+.+++|
T Consensus 102 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence 999999999988743 1233445688899999999998 699999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE---eCCCcEEEEEcCCCee-EEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS---GKDSLVKLWELSSARC-LIA 323 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~---~~dg~i~vwd~~~~~~-~~~ 323 (344)
+|++.+|++++.||.|++||+++++.+..+...|.+..+.++.|+|++++|++| +.|+.|++||+++++. +..
T Consensus 182 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~ 261 (402)
T 2aq5_A 182 VDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSL 261 (402)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEE
T ss_pred EEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceE
Confidence 678999999999999999999999998888445655558999999999999999 7999999999998765 333
Q ss_pred eecCCCcCceeeeeeeccC
Q psy15157 324 YTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~ 342 (344)
+.. ........+.+++++
T Consensus 262 ~~~-~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 262 QEL-DTSSGVLLPFFDPDT 279 (402)
T ss_dssp EEC-CCCSSCEEEEEETTT
T ss_pred Eec-cCCCceeEEEEcCCC
Confidence 332 112234455555554
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.9e-25 Score=201.24 Aligned_cols=196 Identities=17% Similarity=0.338 Sum_probs=158.0
Q ss_pred cceeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.....+.+|...|++++|+|++. +|++|+.||.|++|++.+..... ........+.+|...|.+++|+
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-----------~~~~~~~~~~~h~~~v~~v~~~ 240 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH-----------RVIDAKNIFTGHTAVVEDVAWH 240 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG-----------GEEECSEEECCCSSCEEEEEEC
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC-----------ceeccceeecCCCCCEeeeEEe
Confidence 44566789999999999999988 99999999999999997521110 0011235667899999999999
Q ss_pred C-CCCEEEEEeCCCcEEEEEcCCCcc-ccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE---------------
Q psy15157 189 P-SAPILASGSKDKTVKMFDYSKSSV-RKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY--------------- 250 (344)
Q Consensus 189 ~-~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~--------------- 250 (344)
| ++.+|++++.||.|++||++++.. ........|...|++++|+|++. ++++|+.++.|++|
T Consensus 241 p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h 320 (430)
T 2xyi_A 241 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 320 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC
Confidence 9 677999999999999999998631 12233346788999999999987 68899999999998
Q ss_pred ---------cCCC-CEEEEEeCCCcEEEEeCCC--------------CeEEeeecccCCCccEEEEEEccCCC-EEEEEe
Q psy15157 251 ---------SSDG-RIYCSGSKDGDIKIWDGVS--------------SKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG 305 (344)
Q Consensus 251 ---------~~~~-~~l~~~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~ 305 (344)
+|++ .++++++.|+.|++||+.. .+.+..+. .|. ..|++++|+|+++ +|++++
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHT-AKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC-CCS-SCEEEEEECSSSTTEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC-CCC-CCceEEEECCCCCCEEEEEE
Confidence 6777 4799999999999999987 23444443 343 4699999999999 899999
Q ss_pred CCCcEEEEEcCCC
Q psy15157 306 KDSLVKLWELSSA 318 (344)
Q Consensus 306 ~dg~i~vwd~~~~ 318 (344)
.||.|++|++..+
T Consensus 399 ~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 399 EDNIMQVWQMAEN 411 (430)
T ss_dssp TTSEEEEEEECHH
T ss_pred CCCCEEEeEcccc
Confidence 9999999999754
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=3.1e-25 Score=200.07 Aligned_cols=190 Identities=24% Similarity=0.446 Sum_probs=163.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|...|.|++| +++++++|+.||.|++||+.+ ......+.+|.+.|.+++| ++.+|+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~------------------~~~~~~~~~h~~~v~~l~~--~~~~l~ 187 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT------------------LECKRILTGHTGSVLCLQY--DERVII 187 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS------------------CCEEEEECCCSSCEEEEEC--CSSEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC------------------CeEEEEEcCCCCcEEEEEE--CCCEEE
Confidence 467788999988 799999999999999999853 4567788999999999999 778999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------ 251 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------ 251 (344)
+|+.||+|++||+.+++....+ ..|...|.+++|+ +.++++|+.|+.+++|+
T Consensus 188 sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEETTSCEEEEESSSCCEEEEE--CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEE--cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 9999999999999998765433 4578889999996 46999999999999992
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
.++.++++|+.||.|++||+++++.+..+. .|. ..|.++.| ++++|++|+.||.|++||+++++++..+.+|....
T Consensus 264 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~-~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v 339 (435)
T 1p22_A 264 FDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHK-RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 339 (435)
T ss_dssp EETTEEEEEETTSEEEEEETTTCCEEEEEE-CCS-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred eCCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCC-CcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcE
Confidence 356789999999999999999999998887 444 46999998 47899999999999999999999999999987765
Q ss_pred ceee
Q psy15157 332 QQFE 335 (344)
Q Consensus 332 ~~~~ 335 (344)
..+.
T Consensus 340 ~~~~ 343 (435)
T 1p22_A 340 RCIR 343 (435)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=1.2e-24 Score=196.87 Aligned_cols=222 Identities=20% Similarity=0.372 Sum_probs=173.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCC----------------------CCcCCCCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS----------------------EPQNDQQG 168 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~----------------------~~~~~~~~ 168 (344)
....+.+|.+.|++++|+ ++++++|+.||+|++||+.++......... ...++...
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 455678999999999997 679999999999999999765432222110 01223445
Q ss_pred CceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEE
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 248 (344)
...+..+.+|...|.+++| ++..+++|+.||.|++||+++++....+ ..|...+.++.| ++.++++++.|+.++
T Consensus 229 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 229 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF--DGIHVVSGSLDTSIR 302 (445)
T ss_dssp CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE--CCCSSCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe--cCCCCceEEEEE--CCCEEEEEeCCCeEE
Confidence 6677788899999999999 6788999999999999999887654433 457788999999 889999999999999
Q ss_pred EE---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-CCccEEEEEEccCCCEEEEEeC
Q psy15157 249 LY---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-DGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 249 ~~---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+| .+++.++++|+.||.|++||+++++.+..+.... +...|.+++|+ +++|++|+.
T Consensus 303 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 303 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp EEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET
T ss_pred EEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC
Confidence 99 3467899999999999999999999988886421 23579999995 689999999
Q ss_pred CCcEEEEEcCCCeeEEEeec---CCCcCceeeeeeeccC
Q psy15157 307 DSLVKLWELSSARCLIAYTG---AGSMGQQFELTLTVDA 342 (344)
Q Consensus 307 dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 342 (344)
||.|++||+.+++.+..+.. .+..+....+.+++++
T Consensus 381 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 381 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 99999999999999988832 2333445555555553
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=1.2e-24 Score=196.70 Aligned_cols=193 Identities=26% Similarity=0.484 Sum_probs=161.6
Q ss_pred eeEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPC-RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+.| .|+.+ +|+++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+
T Consensus 111 ~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~~~~~-- 168 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVT------------------GKCLRTLVGHTGGVWSSQMR-- 168 (445)
T ss_dssp CEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTT------------------CCEEEECCCCSSCEEEEEEE--
T ss_pred eEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCC------------------CcEEEEEcCCCCCEEEEEec--
Confidence 34678999875 55554 689999999999999999853 45677888999999999997
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------- 251 (344)
+..+++|+.||+|++||+.+++.... ...|...|.++.|+ +..+++|+.|+.+++|+
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 244 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 244 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEE--ECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEE
Confidence 56999999999999999998865433 34577889999985 57899999999999992
Q ss_pred --CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 252 --SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 252 --~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
.++.++++|+.||.|++||+++++.+..+. .|. ..|.++.| ++.++++|+.||.|++||+++++++..+.+|..
T Consensus 245 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~-~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 320 (445)
T 2ovr_B 245 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHT-NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 320 (445)
T ss_dssp EEECSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCS-SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS
T ss_pred EEECCCEEEEEcCCCEEEEEECCCCcEeEEec-CCC-CceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc
Confidence 357789999999999999999999888886 343 46999998 789999999999999999999999999988866
Q ss_pred cCcee
Q psy15157 330 MGQQF 334 (344)
Q Consensus 330 ~~~~~ 334 (344)
....+
T Consensus 321 ~v~~~ 325 (445)
T 2ovr_B 321 LTSGM 325 (445)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 54433
No 113
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.7e-24 Score=219.15 Aligned_cols=184 Identities=24% Similarity=0.381 Sum_probs=161.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
....+.+|.+.|++++|+|+++++++|+.||+|+|||+.+ +..+..+.+|...|.+++|+|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT------------------GKLVHTYDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSS
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC------------------CceEEEEcCCCCcEEEEEEecC
Confidence 4556789999999999999999999999999999999954 456788899999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.++++|+.||.|++||+.+++.... ...|...|.+++|+|+++++++++.|+.+++|
T Consensus 711 ~~~~~l~sg~~d~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 711 SNHLLLATGSNDFFLKLWDLNQKECRNT--MFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFL 788 (1249)
T ss_dssp SSCCEEEEEETTSCEEEEETTSSSEEEE--ECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-
T ss_pred CCceEEEEEeCCCeEEEEECCCcchhhe--ecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccccc
Confidence 455899999999999999998865443 34688899999999999999999999999998
Q ss_pred ------------------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 251 ------------------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 251 ------------------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+|++.++++++.||.|++||
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN 868 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE
T ss_pred ccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 24577888999999999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+.++..+..+. .|. ..|.+++|+|+|++|++++.||.|++||+.
T Consensus 869 ~~~~~~~~~~~-~h~-~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 869 IDSRLKVADCR-GHL-SWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp TTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred cCCCceeeecC-CCc-cceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 99999888876 444 469999999999999999999999999865
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.4e-26 Score=198.62 Aligned_cols=192 Identities=14% Similarity=0.211 Sum_probs=146.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKM 205 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 205 (344)
.+.+++.++++|+.||+|++||+.++ ..+..+. ...|.++.|+|+ +++++.|++|++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~------------------~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~ 99 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDS------------------KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLL 99 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSS------------------SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCC------------------cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEE
Confidence 34467889999999999999999642 2233333 466778888888 999999999999
Q ss_pred EEcCC---------CccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE------------------------
Q psy15157 206 FDYSK---------SSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 206 wd~~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------------ 250 (344)
|+... ++....+. ..+...|.+++|+| +++++++++.|+.+++|
T Consensus 100 w~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 100 LYPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL 178 (343)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEE
T ss_pred EEccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEE
Confidence 97763 22222222 23457799999999 99999999999999998
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEE-eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec---
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCV-ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG--- 326 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--- 326 (344)
+|+|.++++|+.||.|++||+++++.+ ..+...|. .+|++++|+|+|.+|++++ |+.|++||+++++++..+..
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE-AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTI 256 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT-SCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC-CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccc
Confidence 789999999999999999999999877 66664355 5799999999999999999 45999999999987766554
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
+........+.+++++.
T Consensus 257 ~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp -----CCEEEEECTTSS
T ss_pred ccccccceEEEECCCCC
Confidence 22221113466666543
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=1.6e-24 Score=190.18 Aligned_cols=198 Identities=13% Similarity=0.165 Sum_probs=148.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.+|.+.|++++|+|||++|++|+.|+ ++||++++. ..... .+...+..+++.++++.+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~------------------~~~~~--~~~~~~~~~~~~~~~~~~ 73 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV------------------AHIMS--QEMRHLSKVRMLHRTNYV 73 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE------------------EEEEE--EECSCCCEEEECTTSSEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc------------------ceeee--eecCCeEEEEEcCCCCEE
Confidence 478999999999999999999998775 789998642 11211 122247788899888866
Q ss_pred -EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC------------------
Q psy15157 195 -ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR------------------ 255 (344)
Q Consensus 195 -~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~------------------ 255 (344)
++++.|++|++||+.+++....+ .+...|.+++++++. ++++ .++.+++|+....
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~~~---~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~ 147 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVSRI---KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN 147 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEE---ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET
T ss_pred EEEECCccEEEEEECCCCcEEEEE---ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc
Confidence 56788899999999988665433 356689999998753 4444 4788999976554
Q ss_pred -EEEE--EeCCCcEEEEeCCCCe----------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCc-EEEEEc
Q psy15157 256 -IYCS--GSKDGDIKIWDGVSSK----------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL-VKLWEL 315 (344)
Q Consensus 256 -~l~~--~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-i~vwd~ 315 (344)
+++. |+.||.|++||+.+++ ++..+. .|. ..|++++|+|+|++|++|+.|++ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~-~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHT-NPIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCS-SCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccC-CceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 4554 6899999999999865 144554 454 47999999999999999999998 999999
Q ss_pred CCCeeEEEee-c-CCCcCceeeeeeeccCC
Q psy15157 316 SSARCLIAYT-G-AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 316 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 343 (344)
++++++..+. + |. .....+.|++++.
T Consensus 226 ~~~~~~~~~~~g~h~--~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 226 EDGVLVREFRRGLDR--ADVVDMKWSTDGS 253 (355)
T ss_dssp TTCCEEEEEECTTCC--SCEEEEEECTTSC
T ss_pred CCCcEEEEEEcCCCC--CcEEEEEECCCCC
Confidence 9999999998 4 54 4556667777654
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=191.02 Aligned_cols=183 Identities=20% Similarity=0.235 Sum_probs=148.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE--cCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF--HPS 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~ 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+. . ...+..|...|.+++| +|+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~------------------~-~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN------------------Q-AIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT------------------E-EEEEEECSSCEEEEEEEECSS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC------------------C-ceeeccccCceEEEEEEeCCC
Confidence 567899999999999999999999999999999999642 2 3345679999999999 899
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeec---------------------------------------cccceEEEEE
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQ---------------------------------------ESTFVRCLSF 231 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------------~~~~v~~~~~ 231 (344)
+.+|++++.||.|++||+++++....+.... ....+.++.+
T Consensus 141 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T 3mmy_A 141 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAI 220 (368)
T ss_dssp CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEE
T ss_pred CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEE
Confidence 9999999999999999998876443332110 1123455556
Q ss_pred ecCCCE----EEEEeCCCEEEEE--------------------------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 232 HPCGDY----MVVGTDHFVLRLY--------------------------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 232 ~~~~~~----l~~~~~~~~i~~~--------------------------------------~~~~~~l~~~~~dg~i~iw 269 (344)
.++... +++++.++.+++| +|++++|++|+.||.|++|
T Consensus 221 ~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iw 300 (368)
T 3mmy_A 221 FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW 300 (368)
T ss_dssp EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEE
Confidence 555544 9999999988887 5788899999999999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
|+.+++++..+. .|. ..|.+++|+|+|++|++++.|+..+.|++-
T Consensus 301 d~~~~~~~~~~~-~~~-~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 301 DKDARTKLKTSE-QLD-QPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ETTTTEEEEECC-CCS-SCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred ECCCCcEEEEec-CCC-CCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999998887 343 479999999999999999998866555543
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-24 Score=194.89 Aligned_cols=180 Identities=13% Similarity=0.134 Sum_probs=139.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-----CeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE-----EVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~ 191 (344)
.|...|++++|||+|++||+++.||.|+|||... .+..+. |.. .|.+++|+|+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--------------------~l~~l~-~~~~~~~~sv~svafSPDG 141 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--------------------MLTNLD-SKGNLSSRTYHCFEWNPIE 141 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--------------------EEEECC-CSSCSTTTCEEEEEECSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--------------------eeeecc-CCCccccccEEEEEEcCCC
Confidence 6688999999999999999999999999999642 455556 655 59999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcc-------cccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSV-------RKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSK 262 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 262 (344)
++|++|+.||+|++||+.++.. ...+. ..+|...|.+++|+|+| ++ +++.
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--La-------------------ass~ 200 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LV-------------------AALS 200 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EE-------------------EEET
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EE-------------------EEeC
Confidence 9999999999999999988753 11111 13466799999999966 33 6788
Q ss_pred CCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeee
Q psy15157 263 DGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339 (344)
Q Consensus 263 dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (344)
|+.|++||+..++. ..++..+|. ..|.+++|+ |++|++++ ++.|++||+.+++......+|.+....+.+..+
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s 276 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHE 276 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTC
T ss_pred CCeEEEEECCCCccccceeeeccccc-CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeC
Confidence 99999999988773 244543444 469999999 68999998 699999999988874444477776666555224
Q ss_pred ccC
Q psy15157 340 VDA 342 (344)
Q Consensus 340 ~~~ 342 (344)
+++
T Consensus 277 ~d~ 279 (588)
T 2j04_A 277 KES 279 (588)
T ss_dssp SSC
T ss_pred CCC
Confidence 443
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.2e-24 Score=207.87 Aligned_cols=207 Identities=12% Similarity=0.084 Sum_probs=159.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccccc----------CCCCC--Cc---------------CCCCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS----------MESSE--PQ---------------NDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~----------~~~~~--~~---------------~~~~~~ 169 (344)
+|...|++++|+|+|++||+|+.||+|+|||+.+...... .+... .. .-..+.
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 8999999999999999999999999999999976421000 00000 00 000112
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccc--e-eee-ccccceEEEEEe-----cCC---CE
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA--H-KTI-QESTFVRCLSFH-----PCG---DY 237 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~-~~~-~~~~~v~~~~~~-----~~~---~~ 237 (344)
.++..+.+|.+.|++++|+|+| +|++|+.|++|++||++++..... . ... +|...|++++|+ ||| .+
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~ 644 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSIL 644 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceE
Confidence 4577889999999999999999 999999999999999987654321 1 111 678889999999 885 89
Q ss_pred EEEEeCCCEEEEEc------------------------------------------------------CCCCEEEEEeCC
Q psy15157 238 MVVGTDHFVLRLYS------------------------------------------------------SDGRIYCSGSKD 263 (344)
Q Consensus 238 l~~~~~~~~i~~~~------------------------------------------------------~~~~~l~~~~~d 263 (344)
|++|+.|+.|++|+ +++..++ +.+
T Consensus 645 l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~--~~~ 722 (902)
T 2oaj_A 645 MVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLI--TGF 722 (902)
T ss_dssp EEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEE--ECS
T ss_pred EEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEE--Eec
Confidence 99999999999993 2222333 337
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEE---E------EccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSL---T------FTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i---~------~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..|+||++.++++.+... .+. ..+.++ . |++++..|++++.||.|++|++.+++++..+.-..
T Consensus 723 ~~ir~~~~~~~k~~~k~~-~~~-~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~ 794 (902)
T 2oaj_A 723 DDIRLITLGKSKSTHKGF-KYP-LAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPF 794 (902)
T ss_dssp SEEEEECTTCCCEEEEEC-SSC-EEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEeCccccceeeEc-ccc-eeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhhccCCc
Confidence 789999999999887774 333 456665 5 68889999999999999999999999999987643
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.1e-24 Score=184.49 Aligned_cols=165 Identities=10% Similarity=0.097 Sum_probs=128.7
Q ss_pred ecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCCCC
Q psy15157 116 TSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 192 (344)
.+|.+.|.+++|+| +++++++|+.||+|++||++++ ...... ..|...|.+++|+|++.
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~------------------~~~~~~~~~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD------------------SQYIVHSAKSDVEYSSGVLHKDSL 183 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS------------------CEEEEECCCSSCCCCEEEECTTSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC------------------cEEEEEecCCCCceEEEEECCCCC
Confidence 46778999999999 9999999999999999999642 233333 34566899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
+|++|+.||.|++||+++++.. ..+. ..|...|++++|+|+|.+|+ +++ |+.|++||+
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~l~-------------------s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYWMV-------------------VEC-DQTVVCFDL 242 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSEEE-------------------EEE-SSBEEEEET
T ss_pred EEEEEcCCCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCEEE-------------------EEe-CCeEEEEEc
Confidence 9999999999999999988654 2232 23788999999999666555 677 459999999
Q ss_pred CCCeEEeeecccC-CCccE--EEEEEccCCCEEEEEeC-CCcEEEEEcCCCe
Q psy15157 272 VSSKCVATFSKAH-DGAEI--SSLTFTRNGKYLLSSGK-DSLVKLWELSSAR 319 (344)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~v--~~i~~~~~~~~l~s~~~-dg~i~vwd~~~~~ 319 (344)
++++.+..+.... +...+ .+++|+|+|++|++++. |+.|++|++.++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 243 RKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 9987765554210 11123 36999999999999988 9999999996653
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.5e-24 Score=195.62 Aligned_cols=183 Identities=11% Similarity=0.107 Sum_probs=144.9
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+-...|.+++|||||+++||++.|++|+ |... . ..+.+|...|.+++|+|+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~------------------~---~~l~gh~~~v~~V~FsPdg----- 64 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKY------------------A---KDINCNSKNLFHVKEFPLE----- 64 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECC------------------C---SCCSSBGGGTEEEEEECCC-----
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccc------------------c---ceecCCCccEEEEEECCCC-----
Confidence 4457899999999999999999999999 6432 1 1336899999999999998
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------~ 251 (344)
.++.+.+|+.... ..+. ..+...|.+++|+|+|.+|++++.+|.+++| +
T Consensus 65 --~~~~~~~~~~~~~---~~~~-~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafS 138 (588)
T 2j04_A 65 --FENKLDFELAQQN---GLLN-SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWN 138 (588)
T ss_dssp --CCCTTTTSCCCSS---CSST-TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEEC
T ss_pred --CcceEEEEeCCCc---eEee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEc
Confidence 5666666664432 2222 1346789999999999999999999999998 5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeE-------Eeeec---ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee-
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKC-------VATFS---KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC- 320 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~---~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~- 320 (344)
|+|++|++|+.||+|++||+.+++. +.++. .+|. .+|.+++|+|+| +++++.|+.|++||+.+++.
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~-~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK-DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC-CCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccc-ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc
Confidence 8999999999999999999998752 45552 3444 589999999999 88899999999999988874
Q ss_pred --EEEee-cCCCcCceeee
Q psy15157 321 --LIAYT-GAGSMGQQFEL 336 (344)
Q Consensus 321 --~~~~~-~~~~~~~~~~~ 336 (344)
..+++ +|......+.+
T Consensus 216 ~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp CCEEEEECCCSSCCCCEEE
T ss_pred cceeeecccccCcEEEEEE
Confidence 35674 66555555444
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=6.5e-22 Score=175.55 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=159.9
Q ss_pred EEecCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+| ..+.+++|+|+++++ ++++.|+.|++||+.+ .+....+..+. .+.+++|+|+++
T Consensus 27 ~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~------------------~~~~~~~~~~~-~v~~~~~spdg~ 86 (391)
T 1l0q_A 27 TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT------------------NNVIATVPAGS-SPQGVAVSPDGK 86 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT------------------TEEEEEEECSS-SEEEEEECTTSS
T ss_pred EeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCC------------------CeEEEEEECCC-CccceEECCCCC
Confidence 44555 458999999999976 6777999999999854 34455555444 899999999999
Q ss_pred EEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE--------------------
Q psy15157 193 ILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 193 ~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~-------------------- 250 (344)
.|+ +++.|+.|++||+.+++....+ .....+.+++|+|+++++ ++++.++.+++|
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 163 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTV---KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGI 163 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE---ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEE
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEE---eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceE
Confidence 775 5556799999999987654333 344568999999999988 577779999998
Q ss_pred --cCCCCEE-EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe---CCCcEEEEEcCCCeeEEEe
Q psy15157 251 --SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG---KDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 --~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~ 324 (344)
+++++++ ++++.++.|++||+++++.+..+. .+ ..+.+++|+|++++|++++ .++.|++||+.+++.+..+
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 6788877 677889999999999998887775 22 3689999999999999888 6899999999999999999
Q ss_pred ecCCCcCceeeeeeeccCC
Q psy15157 325 TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~ 343 (344)
..+.. ...+.++++++
T Consensus 241 ~~~~~---~~~~~~s~dg~ 256 (391)
T 1l0q_A 241 PVGPD---PAGIAVTPDGK 256 (391)
T ss_dssp ECCSS---EEEEEECTTSS
T ss_pred ecCCC---ccEEEEccCCC
Confidence 87654 24556666553
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=4.6e-22 Score=178.94 Aligned_cols=202 Identities=13% Similarity=0.138 Sum_probs=165.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.+|.+.|++++|+++++++++++.|+.|++||+++ ......+..|...+.+++|+|+++.+
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT------------------LAYKATVDLTGKWSKILLYDPIRDLV 226 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT------------------CCEEEEEECSSSSEEEEEEETTTTEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC------------------ceEEEEEcCCCCCeeEEEEcCCCCEE
Confidence 358899999999999999999999999999999853 34566777899999999999999977
Q ss_pred E-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--------CCCEEEEE---------------
Q psy15157 195 A-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT--------DHFVLRLY--------------- 250 (344)
Q Consensus 195 ~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~~i~~~--------------- 250 (344)
+ +++.|+.|++||+++++....+ .....+.+++|+|+|+++++++ .++.+++|
T Consensus 227 ~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~ 303 (433)
T 3bws_A 227 YCSNWISEDISVIDRKTKLEIRKT---DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG 303 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEC---CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEe---cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC
Confidence 4 5558999999999887654333 2345589999999999999988 47888888
Q ss_pred -------cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC---------------C
Q psy15157 251 -------SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK---------------D 307 (344)
Q Consensus 251 -------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---------------d 307 (344)
+|+++ ++++++.|+.|++||+.+++.+..+. +. ..+.+++|+|+|++|++++. |
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--CC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccc
Confidence 57776 45677899999999999998887775 22 35899999999999988876 5
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 308 SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|.|++||+.+++.+..+.++. ....+.++++++
T Consensus 381 g~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~ 413 (433)
T 3bws_A 381 GKVYVIDTTTDTVKEFWEAGN---QPTGLDVSPDNR 413 (433)
T ss_dssp CEEEEEETTTTEEEEEEECSS---SEEEEEECTTSC
T ss_pred eEEEEEECCCCcEEEEecCCC---CCceEEEcCCCC
Confidence 799999999999999988743 345666666653
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=2.8e-21 Score=171.41 Aligned_cols=186 Identities=16% Similarity=0.185 Sum_probs=150.8
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE-EE
Q psy15157 119 KSPCRAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL-AS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s 196 (344)
...+.+++|+|++++++ +++.|+.|++||+.+ .+....+.. ...+.+++|+|+++.+ ++
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~------------------~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS------------------NTVAGTVKT-GKSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT------------------TEEEEEEEC-SSSEEEEEECTTSSEEEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCC------------------CeEEEEEeC-CCCcceEEECCCCCEEEEE
Confidence 34999999999999775 555679999999964 333444443 4568999999999966 78
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~----------------------~~~ 253 (344)
++.|+.|++||+.+++....+. ....+.+++|+|+++++ +++..++.+++| +++
T Consensus 134 ~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 134 NNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPE 210 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTT
T ss_pred eCCCCEEEEEECCCCcEEEEEe---cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCC
Confidence 8889999999999876544332 34567999999999988 566778999988 688
Q ss_pred CCEEEEEe---CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 254 GRIYCSGS---KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 254 ~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
++++++++ .++.|++||+.+++.+..+.. +. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+..
T Consensus 211 g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 211 GTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GP--DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEEEecCcCCCcEEEEECCCCeEEEEEec-CC--CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcC
Confidence 99888888 689999999999998888764 32 47899999999988 5678899999999999999999876643
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=3.4e-21 Score=172.53 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=155.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCC---eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDA---SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
...+.+|...|.+++|+|+|++|++++.|+ .|++||+.++ + ...+..|...+.+++|+
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg------------------~-~~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG------------------A-VRQVASFPRHNGAPAFS 231 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC------------------C-EEEEECCSSCEEEEEEC
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC------------------c-EEEeecCCCcccCEEEc
Confidence 456778999999999999999999999885 9999999642 2 23466788899999999
Q ss_pred CCCCEEE-EEeCCCc--EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CC--EEEEE------------
Q psy15157 189 PSAPILA-SGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HF--VLRLY------------ 250 (344)
Q Consensus 189 ~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~~------------ 250 (344)
|+++.|+ +++.|+. |++||+.+++.. ....+...+.+++|+|+|++|++++. ++ .+.+|
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~ 308 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIR---QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW 308 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEE---ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEE---eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec
Confidence 9999777 7776665 999999887542 33345677999999999999988876 44 45543
Q ss_pred ----------cCCCCEEEEEeCC---CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC---cEEEEE
Q psy15157 251 ----------SSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS---LVKLWE 314 (344)
Q Consensus 251 ----------~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg---~i~vwd 314 (344)
+|+|++|++++.+ ..|++||+.+++.. .+. .+. .+.+++|+|+|++|++++.++ .|++||
T Consensus 309 ~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 309 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-STF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC-CSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec-CCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 7999999888765 58999999998774 343 222 589999999999999988777 799999
Q ss_pred cCCCeeEEEeecCCCcCceeeeeeec
Q psy15157 315 LSSARCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
+. ++.+..+.++.+. ..+..|++
T Consensus 385 ~~-g~~~~~l~~~~~~--v~~~~~~~ 407 (415)
T 2hqs_A 385 TD-GRFKARLPATDGQ--VKFPAWSP 407 (415)
T ss_dssp TT-SCCEEECCCSSSE--EEEEEECC
T ss_pred CC-CCcEEEeeCCCCC--CcCCcccc
Confidence 96 6667777776543 34445544
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=3.2e-21 Score=173.42 Aligned_cols=198 Identities=13% Similarity=0.167 Sum_probs=159.0
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-----EecCCcCCeEEEEEcCCCCE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-----TLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+.+++|+|++.++++++.|+.|++||+.++ .... .+.+|.+.|.+++|++++.+
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG------------------QTVRLSPPEKYKKKLGFVETISIPEHNEL 183 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTC------------------CEEEECCCHHHHTTCCEEEEEEEGGGTEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCC------------------eEeeecCcccccccCCceeEEEEcCCCEE
Confidence 345679999998888889989999999998643 2223 34578899999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
+++++.|+.|++||+.+++....+ ..+...+.+++|+|+++++++++ .++.+.+|
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 261 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATV--DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLL 261 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEE--ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEE
T ss_pred EEEECCCCEEEEEECCCceEEEEE--cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEE
Confidence 999999999999999887654433 35677899999999999886555 78999998
Q ss_pred cCCCCEEEEEe--------CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeE
Q psy15157 251 SSDGRIYCSGS--------KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|+|+++++++ .|+.|++||+.+++.+..+. +. ..+.+++|+|+++++ ++++.|+.|++||+.+++.+
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~-~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PP-GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EE-ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CC-CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 67898998888 58899999999998877663 22 258899999999765 56689999999999999998
Q ss_pred EEeecCCCcCceeeeeeeccC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..+.... ....+.+++++
T Consensus 339 ~~~~~~~---~~~~~~~s~dg 356 (433)
T 3bws_A 339 KSIPVFD---KPNTIALSPDG 356 (433)
T ss_dssp EEEECSS---SEEEEEECTTS
T ss_pred EEecCCC---CCCeEEEcCCC
Confidence 8886432 23455566554
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=6.3e-21 Score=167.28 Aligned_cols=170 Identities=11% Similarity=0.165 Sum_probs=118.1
Q ss_pred CceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..+..+++.++++++ ++|+.|++|++||..++ ..+..+. |...|.+++|+++. ++++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~------------------~~~~~~~-~~~~v~~v~~~~~~--~~~~- 116 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK------------------QDVSRIK-VDAPVKDLFLSREF--IVVS- 116 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT------------------EEEEEEE-CSSCEEEEEECSSE--EEEE-
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC------------------cEEEEEE-CCCceEEEEEcCCE--EEEE-
Confidence 458889999988877 56788899999998643 3344443 55678888887653 2222
Q ss_pred CCCcEEEEEcCCC-ccccceeeeccccceEEEEEecCCCEEEE--EeCCCEEEEE-------------------------
Q psy15157 199 KDKTVKMFDYSKS-SVRKAHKTIQESTFVRCLSFHPCGDYMVV--GTDHFVLRLY------------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~~i~~~------------------------- 250 (344)
.|+.|++||+.++ +....+.. ....+++++ .++++ |+.++.+++|
T Consensus 117 ~~~~i~i~d~~~~~~~~~~~~~-----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~ 189 (355)
T 3vu4_A 117 YGDVISVFKFGNPWKRITDDIR-----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGV 189 (355)
T ss_dssp ETTEEEEEESSTTCCBSSCCEE-----EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCE
T ss_pred EcCEEEEEECCCCceeeEEecc-----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccE
Confidence 2566777776655 33322221 222233444 33333 2334333322
Q ss_pred --------------cCCCCEEEEEeCCCc-EEEEeCCCCeEEeeeccc-CCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 --------------SSDGRIYCSGSKDGD-IKIWDGVSSKCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 --------------~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+|+|++|++|+.|++ |++||+++++++..+..+ |. ..|.+++|+|+|++|++++.|++|++||
T Consensus 190 ~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~-~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 190 LIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR-ADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC-SCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC-CcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 456777889999998 999999999999998743 54 5799999999999999999999999999
Q ss_pred cCCCe
Q psy15157 315 LSSAR 319 (344)
Q Consensus 315 ~~~~~ 319 (344)
++.+.
T Consensus 269 ~~~~~ 273 (355)
T 3vu4_A 269 IFNDQ 273 (355)
T ss_dssp SSCCS
T ss_pred ccCCC
Confidence 98753
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=8.6e-21 Score=170.62 Aligned_cols=173 Identities=13% Similarity=0.186 Sum_probs=128.3
Q ss_pred cCCCceEEEEECCCCCEEE----EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-C
Q psy15157 117 SHKSPCRAGAFSIDGQLCA----TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-A 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~----sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~ 191 (344)
.|.+.|++++|+|+|++|+ +|+.|+.|+|||+.+...... ...........+.+|...|.+++|+|+ +
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~-------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 162 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK-------QQKRPFAYHKLLKDAGGMVIDMKWNPTVP 162 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC-------SSCCCSEEEECCCSGGGSEEEEEECSSCT
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc-------CCcceeeeeeccCCCCCceEEEEECCCCC
Confidence 5678899999999999999 889999999999864311000 000111235667789999999999998 7
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.+|++++.||+|++||++++.. ......|...+.+++|+|+|++|+ +|+.||.|++||.
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~--~~~~~~~~~~v~~v~wspdg~~la-------------------sgs~dg~v~iwd~ 221 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVK--VCATLPSTVAVTSVCWSPKGKQLA-------------------VGKQNGTVVQYLP 221 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEE--EEEEECGGGCEEEEEECTTSSCEE-------------------EEETTSCEEEECT
T ss_pred CEEEEEECCCeEEEEEcCCCcc--eeeccCCCCceeEEEEcCCCCEEE-------------------EEcCCCcEEEEcc
Confidence 8999999999999999998743 233345678899999999666555 7888999999998
Q ss_pred CCCeEEeeecccC-----CCccEEEEEEccCCCEEEEE-eCCCc------EEEEEcCCC
Q psy15157 272 VSSKCVATFSKAH-----DGAEISSLTFTRNGKYLLSS-GKDSL------VKLWELSSA 318 (344)
Q Consensus 272 ~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~s~-~~dg~------i~vwd~~~~ 318 (344)
+ ++....+..+. +...|.++.|++++.++++. +.||. +++|++++.
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 8 54444443211 11369999999998887653 34433 899999865
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=5.6e-21 Score=171.86 Aligned_cols=198 Identities=13% Similarity=0.087 Sum_probs=138.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE---
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA--- 195 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~--- 195 (344)
...++.+++++++.++++++.|+ ++||+............ .. ........... ..+...|.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGD-DP-NKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTC-CT-TCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccccc-Cc-ccccccCcccc-ccCCCcccEEEEcCCCCEEEEEE
Confidence 34688999999999999999988 99998754311100000 00 00000001111 23677899999999999998
Q ss_pred -EEeCCCcEEEEEcCCC-----cc---ccce-eeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc
Q psy15157 196 -SGSKDKTVKMFDYSKS-----SV---RKAH-KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD 265 (344)
Q Consensus 196 -s~~~dg~i~iwd~~~~-----~~---~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~ 265 (344)
+|+.|+.|++||+.+. +. .... ....|...|.+++|+|+ ++.+|++++.||.
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~------------------~~~~las~s~Dg~ 173 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT------------------VPSMVAVCLADGS 173 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS------------------CTTEEEEEETTSC
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC------------------CCCEEEEEECCCe
Confidence 7889999999998764 11 1111 22346788999999995 2445558899999
Q ss_pred EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC-----cCceeeeeeec
Q psy15157 266 IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS-----MGQQFELTLTV 340 (344)
Q Consensus 266 i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 340 (344)
|++||++++..+.... .|. ..|.+++|+|+|++|++|+.||.|++||++ ++....+..+.. ......+.+.+
T Consensus 174 v~iwD~~~~~~~~~~~-~~~-~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 174 IAVLQVTETVKVCATL-PST-VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEEESSSEEEEEEE-CGG-GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEEcCCCcceeecc-CCC-CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 9999999987665544 333 469999999999999999999999999998 666677765532 22555666554
Q ss_pred c
Q psy15157 341 D 341 (344)
Q Consensus 341 ~ 341 (344)
+
T Consensus 251 ~ 251 (434)
T 2oit_A 251 T 251 (434)
T ss_dssp T
T ss_pred C
Confidence 3
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=3.3e-20 Score=157.43 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=146.1
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-ccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-MLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~ 191 (344)
.+..|...|.+++|+|+|++|++++ ++.|++||+.+ . ........| ...+.+++|+|++
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~------------------~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP------------------SPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC------------------SCEECCCTTCCCBCSCCEECTTS
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC------------------CceEeccccccccccceEECCCC
Confidence 4567899999999999999999987 78999999964 2 223333344 4678899999999
Q ss_pred CEEEEEe--CCCcEEEEEc--CCCccccceeeeccccceEEEEEecCCCEEE-EEeCCCEEEEE----------------
Q psy15157 192 PILASGS--KDKTVKMFDY--SKSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFVLRLY---------------- 250 (344)
Q Consensus 192 ~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~~---------------- 250 (344)
+.|++++ .++...||.+ .++.. ........+.+++|+|++++++ ++..++.+.+|
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGTP----RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCCC----EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCce----EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 9999988 3455666655 44332 1122333488899999999887 67778888776
Q ss_pred --------cCCCCEEEEEe-CCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----------Cc
Q psy15157 251 --------SSDGRIYCSGS-KDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----------SL 309 (344)
Q Consensus 251 --------~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----------g~ 309 (344)
+|+|++++.++ .++.+++|++. .+.....+.. +. ..+.++.|+|+|++|++++.+ +.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 78999877666 58999999876 4445555542 32 468999999999999988765 56
Q ss_pred EEEEEcCCCeeEEE--eecCCCcCceeeeeeeccCC
Q psy15157 310 VKLWELSSARCLIA--YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 310 i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 343 (344)
|++||+.+++.... +.+|... ...+.++++++
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~--~~~~~~spdg~ 284 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGT--MNSPNWSPDGD 284 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTT--SCSCCBCTTSS
T ss_pred EEEEecCCCCceeeeccCCCCcc--cccceECCCCC
Confidence 99999998876443 3344333 34455555553
No 130
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.84 E-value=7.8e-19 Score=149.26 Aligned_cols=215 Identities=11% Similarity=0.097 Sum_probs=131.4
Q ss_pred eEEEEECCCCC---EEEEEeCCCeEEEEEcCCc---cccccCCCCC-------CcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 122 CRAGAFSIDGQ---LCATGSVDASIKILDVDRM---LAKSSMESSE-------PQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 122 v~~~~~s~~~~---~l~sg~~dg~v~iwd~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
+.++.|-.-|. .+++++ ...|++|+..+. .........+ ...+..+.-++.-=.-+...|..++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 45555654333 566666 468999999764 2221111111 001111112222223345577888888
Q ss_pred CC----CCEEEEEeC--------------------CCcEEEEEcCC-CccccceeeeccccceEEEEEec---CCCEEEE
Q psy15157 189 PS----APILASGSK--------------------DKTVKMFDYSK-SSVRKAHKTIQESTFVRCLSFHP---CGDYMVV 240 (344)
Q Consensus 189 ~~----~~~l~s~~~--------------------dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~ 240 (344)
|+ ++.+++++. |+.|++|++.. ++... ....|...++.++|++ ++.+|++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~--s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKE--NQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEE--EEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceee--eeccCCCceeeEEeeccCCCCceEEE
Confidence 88 777777653 77888888744 44332 2234666677788888 6789999
Q ss_pred EeCCCEEEEE--------------------------cCCCCEE------------EEEeCCCcEEEEeCCCCeEEeeec-
Q psy15157 241 GTDHFVLRLY--------------------------SSDGRIY------------CSGSKDGDIKIWDGVSSKCVATFS- 281 (344)
Q Consensus 241 ~~~~~~i~~~--------------------------~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~- 281 (344)
++.|++|++| +|+|.++ ++|+.|++|++||..+++.+..+.
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 9999999998 2344443 567888999999999998776542
Q ss_pred ---ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 282 ---KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 282 ---~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+|.+ .+.+..+ ++.++++|+.|++|+|||+.+++++.++++|..... ..+.|++|+.
T Consensus 279 ~~p~Gh~~-~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv-s~vafSPDG~ 339 (356)
T 2w18_A 279 CLPPGQAG-RFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW-SFVKWSGTDS 339 (356)
T ss_dssp CCCTTCCC-CEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC-CEEEECSSSS
T ss_pred eccCCCcc-eeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE-EEEEECCCCC
Confidence 23432 2444444 488999999999999999999999999998865332 2356777764
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=1.4e-19 Score=162.05 Aligned_cols=202 Identities=11% Similarity=0.068 Sum_probs=152.0
Q ss_pred eEEecCCCceEEEEECC--------------CCCEEEEEeCC------CeEEEEEcCCccccccCCCCCCcCCCCCCceE
Q psy15157 113 AYVTSHKSPCRAGAFSI--------------DGQLCATGSVD------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVI 172 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~--------------~~~~l~sg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (344)
..+.+|...++.+++++ .+..++.++.+ +.|++||++. ...
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-------------------~~~ 171 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-------------------YNQ 171 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-------------------CSC
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-------------------CCC
Confidence 45778988888887764 15566666654 7999999852 224
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEE-EEeCCCE--
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDK---TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFV-- 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~-- 246 (344)
..+.+|...+.+++|+|+++.|++++.|+ .|++||+.+++.. ....+...+.+++|+|+|++|+ +++.++.
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 56677889999999999999999999885 9999999987653 2334566899999999999888 5555544
Q ss_pred EEEE----------------------cCCCCEEEEEeCC-C--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 247 LRLY----------------------SSDGRIYCSGSKD-G--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 247 i~~~----------------------~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
|.+| +|+|++|++++.+ + .|++||+.+++... +. .+ +..+.+++|+|+|++|
T Consensus 249 i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~-~~-~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 249 LYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT-WE-GSQNQDADVSSDGKFM 325 (415)
T ss_dssp EEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC-CS-SSEEEEEEECTTSSEE
T ss_pred EEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee-cC-CCcccCeEECCCCCEE
Confidence 6655 7899988888764 4 68888998886433 32 22 2468899999999999
Q ss_pred EEEeCC---CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 302 LSSGKD---SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 302 ~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++++.+ ..|++||+.+++.. .+..+. ......+++|+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~---~~~~~~~spdg~ 366 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ-VLSSTF---LDETPSLAPNGT 366 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE-ECCCSS---SCEEEEECTTSS
T ss_pred EEEECcCCceEEEEEECCCCCEE-EecCCC---CcCCeEEcCCCC
Confidence 988764 58999999998774 455443 556677777764
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=2.5e-18 Score=149.28 Aligned_cols=210 Identities=10% Similarity=0.061 Sum_probs=142.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCC-CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVD-ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..|...+.+++|+|+|+++++++.+ +.|++|+++.. ......+..+..+. .+.+++|+|+++.|
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD--------------DGALTFAAESALPG-SLTHISTDHQGQFV 98 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT--------------TCCEEEEEEEECSS-CCSEEEECTTSSEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC--------------CCceeeccccccCC-CCcEEEEcCCCCEE
Confidence 4677889999999999998888886 99999998610 01122334444444 78899999999977
Q ss_pred EEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 195 ASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 195 ~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
++++. ++.|.+||+.++..............+.+++|+|+|+++++++ .++.+.+|
T Consensus 99 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred EEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 66654 8899999995332222233333445688899999999888876 66666665
Q ss_pred -------cCCCCEEEEE-eCCCcEEEEeCCC--CeE--Eeeec---ccC-CCccEEEEEEccCCCEEEE-EeCCCcEEEE
Q psy15157 251 -------SSDGRIYCSG-SKDGDIKIWDGVS--SKC--VATFS---KAH-DGAEISSLTFTRNGKYLLS-SGKDSLVKLW 313 (344)
Q Consensus 251 -------~~~~~~l~~~-~~dg~i~iwd~~~--~~~--~~~~~---~~~-~~~~v~~i~~~~~~~~l~s-~~~dg~i~vw 313 (344)
+|+|++++++ ..++.|.+||+.. ++. ...+. ..+ ....+.+++|+|+|++|++ +..++.|++|
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF 258 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE
Confidence 6777766544 4889999999953 432 22221 111 1235778999999998875 4579999999
Q ss_pred EcC--C--CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 314 ELS--S--ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 314 d~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+. + .+.+..+..+.. ...+.++++++
T Consensus 259 d~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~ 289 (343)
T 1ri6_A 259 SVSEDGSVLSKEGFQPTETQ---PRGFNVDHSGK 289 (343)
T ss_dssp EECTTSCCEEEEEEEECSSS---CCCEEECTTSS
T ss_pred EEcCCCCceEEeeeecCCCc---cceEEECCCCC
Confidence 998 2 345555554433 34455555543
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=2.4e-17 Score=152.17 Aligned_cols=200 Identities=13% Similarity=0.109 Sum_probs=147.6
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC----CCCEEEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP----SAPILASG 197 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~ 197 (344)
+.+++|+|+|++|++++.|++|++||+.. .+...+.++. +...+..++|+| ++++++++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~----------------~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWA----------------KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTS----------------SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcC----------------CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEE
Confidence 89999999999999999999999999931 1134455555 445679999999 99999888
Q ss_pred eC-CCcEEEEEcCCCccccceeeec---------cccceEEEEEecCCCEEEE-EeCCCEEEEE----------------
Q psy15157 198 SK-DKTVKMFDYSKSSVRKAHKTIQ---------ESTFVRCLSFHPCGDYMVV-GTDHFVLRLY---------------- 250 (344)
Q Consensus 198 ~~-dg~i~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~-~~~~~~i~~~---------------- 250 (344)
+. +++|.+||..+.+....+.... ....+..+.++|++..+++ ...++.|.+|
T Consensus 244 ~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp EEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC
T ss_pred EccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC
Confidence 74 8999999999887665554321 1236889999998766554 4556666554
Q ss_pred --------cCCCCEEEEE-eCCCcEEEEeCCCCeEEeeeccc---CCCccEEEEEEccC-CCEEEEEe-CCCcEEEEEcC
Q psy15157 251 --------SSDGRIYCSG-SKDGDIKIWDGVSSKCVATFSKA---HDGAEISSLTFTRN-GKYLLSSG-KDSLVKLWELS 316 (344)
Q Consensus 251 --------~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~i~~~~~-~~~l~s~~-~dg~i~vwd~~ 316 (344)
+|+|++++++ ..++.|.+||..+++++..+... |.+. ...+ ++|+ +.+++++. .|++|.+||+.
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR-GANF-VHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT-CEEE-EETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC-Cccc-CCCCCccEEEeccCCCceEEEEEeC
Confidence 7889977655 46889999999999988877632 3322 2233 4777 66666665 68999999999
Q ss_pred C-------CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 317 S-------ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 317 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+ .+++.++.+++... ..+.+++++
T Consensus 402 ~~~~~~~~~~~v~~l~~~g~~~--~~v~~~pdg 432 (543)
T 1nir_A 402 PKNHPQYAWKKVAELQGQGGGS--LFIKTHPKS 432 (543)
T ss_dssp TTTCTTTBTSEEEEEECSCSCC--CCEECCTTC
T ss_pred CCCCchhcCeEEEEEEcCCCCc--eEEEcCCCC
Confidence 8 89999999887442 334445543
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.81 E-value=3.7e-18 Score=163.93 Aligned_cols=201 Identities=11% Similarity=0.088 Sum_probs=147.4
Q ss_pred CCceEEEEECCCCCEEEEEeC-CC-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-------------
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-DA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI------------- 179 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------- 179 (344)
...|.+++|||||++|++++. |+ .|++||+.++... ..+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~------------------~~~~~~~~~~~~~~~~~~~~ 97 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR------------------LLVDSKVVLPGTETLSDEEK 97 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE------------------EEECGGGTC-----------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee------------------Eccchhhcccccccccchhh
Confidence 457999999999999999998 88 8999999754321 1121111
Q ss_pred -----------CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC---ccccceeeeccccceEEEEEecCCCEEEEEeCCC
Q psy15157 180 -----------EEVTCLEFHPSAPILASGSKDKTVKMFDYSKS---SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245 (344)
Q Consensus 180 -----------~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 245 (344)
..|.+++|+|||+.|++++. +.|++||+.++ ... ....+...+.+++|+|+|++|+.++.+
T Consensus 98 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~~- 172 (741)
T 2ecf_A 98 ARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRGR- 172 (741)
T ss_dssp ---------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEETT-
T ss_pred hhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeCC-
Confidence 33788999999999998886 99999999887 432 223455679999999999999887642
Q ss_pred EEE---------------------------------------EEcCCCCEEEEEeCCC----------------------
Q psy15157 246 VLR---------------------------------------LYSSDGRIYCSGSKDG---------------------- 264 (344)
Q Consensus 246 ~i~---------------------------------------~~~~~~~~l~~~~~dg---------------------- 264 (344)
.|. .|+|||++|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 333 3578899999888776
Q ss_pred -----------cEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeC-----CCcEEEEEcCCCeeEEEeecC
Q psy15157 265 -----------DIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-----DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 265 -----------~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|++||+.+ ++.............+.+++| |||++|++++. +..|++||+.++++...+..+
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 789999988 776544332122356999999 99999987653 567999999999988777765
Q ss_pred CCcC--ceeeeeeeccCC
Q psy15157 328 GSMG--QQFELTLTVDAD 343 (344)
Q Consensus 328 ~~~~--~~~~~~~~~~~~ 343 (344)
...- ....+.|++|+.
T Consensus 332 ~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp CSSCCCCCSCCEECTTSC
T ss_pred CCCcCCcCCceEECCCCe
Confidence 4211 223455666653
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.80 E-value=1.8e-17 Score=143.42 Aligned_cols=188 Identities=10% Similarity=0.109 Sum_probs=137.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCce-EEEecCCcCCeEEEEEcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 192 (344)
+..+...+ +++|+|+|+++++++. ++.|.+||..++ .. ...+..+.....+++|+|+++
T Consensus 36 ~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 36 ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE------------------PPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS------------------SCEEEEEEECSSCCCCEEECTTSS
T ss_pred EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC------------------ceeEEecccCCCCccceEECCCCC
Confidence 34455667 9999999996666655 899999998642 22 445555666665599999999
Q ss_pred EEEEEeCCC---cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCE-EEEE-----------------
Q psy15157 193 ILASGSKDK---TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFV-LRLY----------------- 250 (344)
Q Consensus 193 ~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~-i~~~----------------- 250 (344)
+++++..++ .|.+||+.+++....+ .......+++|+|+|++++++ ..++. +.+|
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 173 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTI---PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS 173 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEE---ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEE---ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc
Confidence 888555553 8999999887654433 234457899999999876665 44455 6643
Q ss_pred ----------cCCCCEEE-EEeCCCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEc
Q psy15157 251 ----------SSDGRIYC-SGSKDGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWEL 315 (344)
Q Consensus 251 ----------~~~~~~l~-~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~ 315 (344)
+|+|++++ ++..++.|++||+.+++. +..+... ..+..++|+|+|++|++++ .++.|.+||+
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 78898554 455689999999998887 6666522 3578899999999776654 5788999999
Q ss_pred CCCee--EEEeecC
Q psy15157 316 SSARC--LIAYTGA 327 (344)
Q Consensus 316 ~~~~~--~~~~~~~ 327 (344)
.+++. +..+..+
T Consensus 251 ~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 251 LSGTLSFVKSFGHG 264 (331)
T ss_dssp TTTEEEEEEEEECC
T ss_pred CCCceeeecccccc
Confidence 99987 5555433
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=7.2e-17 Score=140.73 Aligned_cols=204 Identities=10% Similarity=0.070 Sum_probs=151.9
Q ss_pred cCCCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.....+..++|+|+++++++++. ++.|.+||..++ +....+.. ...+..++|+|
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~------------------~~~~~~~~-~~~~~~~~~s~ 98 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL------------------EVTQAIHN-DLKPFGATINN 98 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC------------------CEEEEEEE-SSCCCSEEEET
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC------------------eEEEEEec-CCCcceEEECC
Confidence 34467889999999998888774 568999998642 33333332 33467899999
Q ss_pred CCCE-EEEEeCCCcEEEEEcCCCccccceeeeccc-------cceEEEEEecCCCEEEEEe--CCCEEEEE---------
Q psy15157 190 SAPI-LASGSKDKTVKMFDYSKSSVRKAHKTIQES-------TFVRCLSFHPCGDYMVVGT--DHFVLRLY--------- 250 (344)
Q Consensus 190 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~--~~~~i~~~--------- 250 (344)
+++. ++++..++.|.+||..+++....+...... ..+.+++|+|+|++++++. .++.+.+|
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 9995 455566899999999988765544332111 1268899999999888876 47778876
Q ss_pred --------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC--CCccEEEEEEccCCCEEEEEeC-CCcEEEE
Q psy15157 251 --------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--DGAEISSLTFTRNGKYLLSSGK-DSLVKLW 313 (344)
Q Consensus 251 --------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~-dg~i~vw 313 (344)
+++|+++++++.++.|.+||..+++....+.... ....+.+++|+|+|+++++++. ++.|.+|
T Consensus 179 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 258 (353)
T 3vgz_A 179 AIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV 258 (353)
T ss_dssp EECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE
T ss_pred EecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE
Confidence 7889999999999999999999999887765321 1235788999999998777664 5999999
Q ss_pred EcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 314 ELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.+++.+..+..+.. ..+.++++++
T Consensus 259 d~~~~~~~~~~~~~~~----~~~~~s~dg~ 284 (353)
T 3vgz_A 259 DTRNGNILAKVAAPES----LAVLFNPARN 284 (353)
T ss_dssp ETTTCCEEEEEECSSC----CCEEEETTTT
T ss_pred ECCCCcEEEEEEcCCC----ceEEECCCCC
Confidence 9999999888876442 3455555543
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=1.1e-16 Score=139.58 Aligned_cols=198 Identities=10% Similarity=0.075 Sum_probs=147.5
Q ss_pred CCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---------CeEEEEEc
Q psy15157 119 KSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---------EVTCLEFH 188 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~ 188 (344)
...+..++|+++|+++ ++...++.|.+||..++ +....+..+.. .+.+++|+
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG------------------EVKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC------------------CEEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC------------------eeEEEEecCCCccccccCCCCCceEEEC
Confidence 4457889999999955 45556799999998653 23333333322 26889999
Q ss_pred CCCCEEEEEe--CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------
Q psy15157 189 PSAPILASGS--KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 189 ~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------- 250 (344)
|+++.+++++ .++.|.+||..+++....+. .....+.+++|+|+|+++++++.++.+.+|
T Consensus 150 ~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 227 (353)
T 3vgz_A 150 DATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD 227 (353)
T ss_dssp TTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS
T ss_pred CCCCEEEEEecCCCceEEEEcCCCCceEEEec--CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC
Confidence 9999776665 47899999998876544332 134457789999999999999988888876
Q ss_pred -----------cCCCCEEEEEeC-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy15157 251 -----------SSDGRIYCSGSK-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317 (344)
Q Consensus 251 -----------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~ 317 (344)
+|+|+++++++. ++.|.+||..+++.+..+.... ...++|+|+|+++++++ .++.|.+||+.+
T Consensus 228 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 228 GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 567886666654 4899999999999887776332 25689999999766655 789999999999
Q ss_pred CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 318 ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++.+..+..+. ....+.+++|++
T Consensus 304 ~~~~~~~~~~~---~~~~~~~s~dg~ 326 (353)
T 3vgz_A 304 YKVVKTFDTPT---HPNSLALSADGK 326 (353)
T ss_dssp TEEEEEEECCS---EEEEEEECTTSC
T ss_pred CeEEEEEecCC---CCCeEEEcCCCC
Confidence 99998887654 335566666654
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=2.6e-17 Score=143.26 Aligned_cols=182 Identities=12% Similarity=0.075 Sum_probs=137.4
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-C-----cCCeEEEEEcCCCCE
Q psy15157 121 PCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-H-----IEEVTCLEFHPSAPI 193 (344)
Q Consensus 121 ~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~ 193 (344)
.+..++|+|+|+++ +++..++.|.+||+.++ +....+.. + ...+.+++|+|++++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~------------------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 105 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC------------------KNTFHANLSSVPGEVGRSMYSFAISPDGKE 105 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT------------------EEEEEEESCCSTTEEEECSSCEEECTTSSE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC------------------cEEEEEEcccccccccccccceEECCCCCE
Confidence 57899999999865 45567899999998643 22333321 2 234778999999999
Q ss_pred EEEEeCC------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 194 LASGSKD------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 194 l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
|++++.+ +.|.+||+.+++.........+...+.+++|+|+|+ +++++.+ +.+|
T Consensus 106 l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 106 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEE
T ss_pred EEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccc
Confidence 9888865 999999998865444333334445688899999998 5554332 4443
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (349)
T 1jmx_B 183 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 262 (349)
T ss_dssp CSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred cccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEe
Confidence
Q ss_pred cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+| +|++++++ ++.|.+||+.+++.+..+...+ .+.+++|+|+|++|++++.++.|++||+.+++.+..++.++
T Consensus 263 sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 263 SPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp CSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred cCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecCC
Confidence 25 77777776 7899999999999887775332 36789999999999988889999999999999999987663
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=9.9e-17 Score=139.12 Aligned_cols=188 Identities=15% Similarity=0.208 Sum_probs=132.1
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..+.+++|+|+|+++++++. ++.|.+||+..+ ........+..+ ..+.+++|+|+++.+++++
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~---------------~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG---------------LPVGVVDVVEGL-DGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETT---------------EEEEEEEEECCC-TTBCCCEECTTSSEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC---------------ccccccccccCC-CCceEEEECCCCCEEEEec
Confidence 38899999999998876665 889999998411 011233344333 4588999999999877777
Q ss_pred -CCCcEEEEEcCC-Cccccce--ee-eccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 199 -KDKTVKMFDYSK-SSVRKAH--KT-IQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 199 -~dg~i~iwd~~~-~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
.++.|++||+.+ ++..... .. ......+.+++|+|+|+++++++ .++.+.+|
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF 227 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc
Confidence 899999999987 5432211 11 12344688899999999877665 66777666
Q ss_pred -----------cCCCCEEE-EEeCCCcEEEEeCC--C--CeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEE
Q psy15157 251 -----------SSDGRIYC-SGSKDGDIKIWDGV--S--SKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLW 313 (344)
Q Consensus 251 -----------~~~~~~l~-~~~~dg~i~iwd~~--~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vw 313 (344)
+|+|++++ ++..++.|.+||+. + .+.+..+.. + ..+.+++|+|+|++|++++ .++.|.+|
T Consensus 228 ~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 228 SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-E--TQPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-S--SSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-C--CccceEEECCCCCEEEEecCCCCeEEEE
Confidence 56677766 45578999999998 2 344444432 2 2378899999999988887 68999999
Q ss_pred Ec--CCCe--eEEEeec
Q psy15157 314 EL--SSAR--CLIAYTG 326 (344)
Q Consensus 314 d~--~~~~--~~~~~~~ 326 (344)
++ .+++ .+..+..
T Consensus 305 ~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 305 EIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp EEETTTTEEEEEEEEEC
T ss_pred EEcCCCceeeEcccccc
Confidence 54 4664 3444544
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.78 E-value=1.7e-18 Score=165.70 Aligned_cols=204 Identities=8% Similarity=0.061 Sum_probs=144.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---CeEEEEEcCCCCEEEEE
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---EVTCLEFHPSAPILASG 197 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~ 197 (344)
.+.+++|+|||+++++ +.||+|++||+.++ .....+..|.. .|.+++|+|||++|+++
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g------------------~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 78 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN------------------TSTVLIEGKKIESLRAIRYEISPDREYALFS 78 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC------------------CCEEEECTTTTTTTTCSEEEECTTSSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC------------------cEEEEeccccccccccceEEECCCCCEEEEE
Confidence 4677899999998776 78999999999642 33445555554 48999999999999998
Q ss_pred eCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------------------C-----
Q psy15157 198 SKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------------------F----- 245 (344)
Q Consensus 198 ~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------------~----- 245 (344)
+.+ +.|++||+.+++.........+...+..++|+|+|++|+.++.. +
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTE
T ss_pred ecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCce
Confidence 875 78889999987652222112233347789999999998877531 0
Q ss_pred -----------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCC
Q psy15157 246 -----------------VLRLYSSDGRIYCSGSKDG----------------------------------DIKIWDGVSS 274 (344)
Q Consensus 246 -----------------~i~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~ 274 (344)
.-..|+|+|+.|++++.|+ .|++||+.++
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 1244688999999887653 7999999988
Q ss_pred eEEeeecccC----CCccEEEEEEccCCCEEEEEeC----CCcEEEEEcCCCeeEEEeecCCCc-Cc--eeeeeeeccCC
Q psy15157 275 KCVATFSKAH----DGAEISSLTFTRNGKYLLSSGK----DSLVKLWELSSARCLIAYTGAGSM-GQ--QFELTLTVDAD 343 (344)
Q Consensus 275 ~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 343 (344)
+....+.... ....+.+++|+|||++|++.+. +..|++||+.++++...+..+... .. .....|++|++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC
Confidence 7644554221 1346899999999999877643 357999999999887776543211 11 12456666654
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=1.4e-16 Score=138.89 Aligned_cols=190 Identities=13% Similarity=0.194 Sum_probs=131.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec---------CCcCCeEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY---------DHIEEVTC 184 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~ 184 (344)
+..|...+..++|+|+|++|++++ .++.|.+|++... .....+..+. .+...+.+
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~---------------g~~~~~~~~~~~~~~p~~~~~~~~~~~ 145 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD---------------GALTLTDTVQHSGHGPRPEQDGSHIHY 145 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT---------------SCEEEEEEEECCCCCSSTTCSSCCEEE
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC---------------CCeeecceeecCCCCCCccccCCCceE
Confidence 345778899999999999888887 6899999999521 0011111111 12345889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcC-CCccccceee-eccccceEEEEEecCCCEEEEE-eCCCEEEEE-----------
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY----------- 250 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~----------- 250 (344)
++|+|+++++++...++.|.+||+. +++....... ......+..++|+|+|++++++ ..++.+.+|
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 9999999977777778999999998 4433222111 1123357889999999977765 345555444
Q ss_pred ----------------------cCCCCEE-EEEeCCCcEEEEeCCCC---eEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 ----------------------SSDGRIY-CSGSKDGDIKIWDGVSS---KCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 ----------------------~~~~~~l-~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|+|+++ ++...++.|.+||+... +.+..+.. + +..+..++|+|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~-~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-E-GDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-S-SSCCCEEEECTTSSEEEEE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-C-CCCcCeEEECCCCCEEEEE
Confidence 7888876 55667899999998732 44444432 2 2357899999999998888
Q ss_pred eC-CCcEEEE--EcCCCeeE
Q psy15157 305 GK-DSLVKLW--ELSSARCL 321 (344)
Q Consensus 305 ~~-dg~i~vw--d~~~~~~~ 321 (344)
+. ++.|.+| |..+|+..
T Consensus 304 ~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ETTTTEEEEEEECTTTCCEE
T ss_pred EcCCCcEEEEEEeCCCCeEE
Confidence 75 4899999 55566654
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=5.9e-17 Score=141.31 Aligned_cols=209 Identities=11% Similarity=0.139 Sum_probs=139.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+...+..++|+|+|+ +++++. ++.|.+|++.++ ....+..+..+...+..++|+|+++
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g----------------~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ----------------TAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT----------------EEEEEEEEEEESCCCSEEEEETTTT
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC----------------cEEEeeeeecCCCCCEEEEECCCCC
Confidence 45667888999999999 554443 689999998532 1223444455677888999999999
Q ss_pred EEEEEe-CCCcEEEEEcCCCccccceeeecc----------ccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 193 ILASGS-KDKTVKMFDYSKSSVRKAHKTIQE----------STFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 193 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
+|++++ .++.|.+||+.............. ...+.+++|+|+|+.+++...++.+.+|
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 888877 689999999963221111211111 1247889999999955555556667665
Q ss_pred ----------------cCCCCEEEE-EeCCCcEEEEeCCC--CeE--EeeecccCC----CccEEEEEEccCCCEEE-EE
Q psy15157 251 ----------------SSDGRIYCS-GSKDGDIKIWDGVS--SKC--VATFSKAHD----GAEISSLTFTRNGKYLL-SS 304 (344)
Q Consensus 251 ----------------~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~----~~~v~~i~~~~~~~~l~-s~ 304 (344)
+|+|+++++ +..++.|.+|++.. ++. +..+..... ...+..++|+|||++|+ ++
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 788885555 56788999999774 543 222221111 13588999999999885 55
Q ss_pred eCCCcEEEEEcCC---CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 305 GKDSLVKLWELSS---ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..++.|.+|++.. .+.+..+..++.. ...+.+++|+.
T Consensus 259 ~~~~~v~v~~~~~~g~~~~~~~~~~~~~~--~~~~~~spdg~ 298 (347)
T 3hfq_A 259 RGYNTLAVFAVTADGHLTLIQQISTEGDF--PRDFDLDPTEA 298 (347)
T ss_dssp ETTTEEEEEEECGGGCEEEEEEEECSSSC--CCEEEECTTSS
T ss_pred CCCCEEEEEEECCCCcEEEeEEEecCCCC--cCeEEECCCCC
Confidence 6689999999973 2455555554432 23455666654
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.78 E-value=3.2e-17 Score=151.37 Aligned_cols=205 Identities=12% Similarity=0.151 Sum_probs=152.8
Q ss_pred CCCceEEEEECC----CCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC----------C-cCC
Q psy15157 118 HKSPCRAGAFSI----DGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD----------H-IEE 181 (344)
Q Consensus 118 h~~~v~~~~~s~----~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h-~~~ 181 (344)
+...++.++|+| +|+++++++. +++|.|||..+. +++.++.. | ...
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~------------------~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL------------------EPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC------------------CEEEEEECCEECSSSCCEESCCC
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc------------------ccceeecccCcccCccccccCCc
Confidence 456689999999 9999999885 899999998653 33333322 2 237
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE---------
Q psy15157 182 VTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY--------- 250 (344)
Q Consensus 182 v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~--------- 250 (344)
+..+.++|++. ++++...++.|.+||+.+.+.... ....+...+..+.|+|+|+++++++ .++.|.+|
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~-~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV-TSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE-EEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee-EEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 89999999776 567778899999999988654432 2233456688899999999887665 57888888
Q ss_pred -----------------cCC-CCEEEEEe-CCCcEEEEeCCC-------CeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 -----------------SSD-GRIYCSGS-KDGDIKIWDGVS-------SKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -----------------~~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|+ +..+++++ .|++|.+||..+ .++++++.. +. ..+..++++|+|++|+++
T Consensus 361 ~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~-~g-~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 361 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG-QG-GGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp EEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-SC-SCCCCEECCTTCCEEEEC
T ss_pred eeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc-CC-CCceEEEcCCCCCcEEEe
Confidence 244 55566665 689999999998 888888874 33 346789999999999998
Q ss_pred e-------CCCcEEEEEcCCCeeE-EEeec------CCCcCceeeeeeeccCC
Q psy15157 305 G-------KDSLVKLWELSSARCL-IAYTG------AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~-------~dg~i~vwd~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~ 343 (344)
+ .+++|.+||+.+++.. ..+.- ..+......+.|+++++
T Consensus 439 ~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 439 TTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp CTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred cCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 7 2789999999999877 44421 12245666777777764
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=6.7e-17 Score=154.37 Aligned_cols=220 Identities=13% Similarity=0.108 Sum_probs=144.3
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-----ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-----MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
..+..|...+.+++|||||++|+++ .|+.|++||+.+ +............ ...+.. ....+...+.+++|
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~--~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTET--LVYGQA--VHQREFGIEKGTFW 188 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTT--EEESSC--CGGGCTTCCCSEEE
T ss_pred EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCC--eEcccc--hhhhhcCCCceEEE
Confidence 3455677889999999999999995 689999999975 3221100000000 000000 11112233588999
Q ss_pred cCCCCEEEEEe---------------------------------CCCcEEEEEcCCCccccceeeeccccceEEEEEecC
Q psy15157 188 HPSAPILASGS---------------------------------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 188 ~~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 234 (344)
+|||+.|++++ .+..|++||+.+++.........+...+.+++|+|+
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 99999999887 447799999988764333222235567899999999
Q ss_pred CCEEEEEeCCC-----EEEE----------------------------EcC--CCCEEEEEeCCCcEEEEeCC-CCeEEe
Q psy15157 235 GDYMVVGTDHF-----VLRL----------------------------YSS--DGRIYCSGSKDGDIKIWDGV-SSKCVA 278 (344)
Q Consensus 235 ~~~l~~~~~~~-----~i~~----------------------------~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~ 278 (344)
|++|++++.++ .+.+ |+| +|+++++++.|+.+++|++. ++..+.
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE
Confidence 99998866443 3333 477 99999999999999999876 566666
Q ss_pred eecccCCCccEEE-EEEccCCCEEEEEe-CCC----cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 279 TFSKAHDGAEISS-LTFTRNGKYLLSSG-KDS----LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 279 ~~~~~~~~~~v~~-i~~~~~~~~l~s~~-~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+.. +. ..+.. ++|+|+|+.|+.++ .++ .|+.||+.+++ +..+... .....+.+++|++
T Consensus 349 ~l~~-~~-~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~---~~~~~~~~spdg~ 413 (706)
T 2z3z_A 349 QVTK-GE-WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPE---SGMHRTQLSPDGS 413 (706)
T ss_dssp ECCC-SS-SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCS---SSEEEEEECTTSS
T ss_pred ecCC-CC-eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCC---CceEEEEECCCCC
Confidence 6653 32 34666 79999999876654 444 67778887765 3444322 1234566666653
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.7e-17 Score=143.57 Aligned_cols=179 Identities=9% Similarity=0.031 Sum_probs=132.2
Q ss_pred ceEEEEECCCCCEEEEEe------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 121 PCRAGAFSIDGQLCATGS------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.+.+++|+|+|+++++++ .++.|.+||+.++ +....+.. ...+.+++|+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~------------------~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL------------------SRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT------------------EEEEEEEC-CSSCCCEEEC
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC------------------cEEEEEeC-CCCcceeEEC
Confidence 678899999999988886 5799999998642 23333332 3457789999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CE---------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FV--------------------- 246 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~--------------------- 246 (344)
|++++|+++ ++.|.+||+.+++....+........ +.|+|+|.++++.... +.
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 999988777 68999999988765433322111112 2566666644332211 10
Q ss_pred --------------------------EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 247 --------------------------LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 247 --------------------------i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
-..|+|+|++++++ ++.|++||+.+++.+..+... ..+.+++|+|+|++
T Consensus 219 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEECTTSCE
T ss_pred cceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC---CceeeEEECCCCCE
Confidence 13468899998888 789999999999888777533 24789999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|++++.++.|++||+.+++.+..+..+.
T Consensus 294 l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred EEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 9999999999999999999999987653
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=7.5e-17 Score=136.60 Aligned_cols=182 Identities=14% Similarity=0.257 Sum_probs=131.6
Q ss_pred EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-Cccc
Q psy15157 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK-SSVR 214 (344)
Q Consensus 136 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~ 214 (344)
+++.|+.|++||+.++ . ...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++..
T Consensus 17 ~~~~~~~i~~~d~~~~------------------~-~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR------------------K-MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp -CCCCEEEEEEETTTT------------------E-EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE
T ss_pred CCCcceeEEEEeCCCC------------------c-eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce
Confidence 4567899999998632 2 334556888999999999999999877 78999999988 6544
Q ss_pred cceeeeccccceEEEEEecCCCEEEEEe--CCCEEEEE-----------------------cCCCCEEE-EEeCCCcEEE
Q psy15157 215 KAHKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRLY-----------------------SSDGRIYC-SGSKDGDIKI 268 (344)
Q Consensus 215 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~-----------------------~~~~~~l~-~~~~dg~i~i 268 (344)
.... ..+...+.+++|+|+|++++++. .++...+| +|+++.++ +++.++.+++
T Consensus 77 ~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 77 KVDT-GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp ECCC-TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred Eecc-ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEE
Confidence 3221 12235688899999999999988 33344443 78999877 7888999999
Q ss_pred EeC--CCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcC-CCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 269 WDG--VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELS-SARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 269 wd~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|++ .+++. ..+. .+. ..+.+++|+|+|++|+.++ .++.+++|++. .+..+..+..+.. ....+.++++++
T Consensus 156 ~~~~~~~~~~-~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~ 229 (297)
T 2ojh_A 156 YSMDIDSGVE-TRLT-HGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY--GDWFPHPSPSGD 229 (297)
T ss_dssp EEEETTTCCE-EECC-CSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE--EEEEEEECTTSS
T ss_pred EEEECCCCcc-eEcc-cCC-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc--ccCCeEECCCCC
Confidence 985 34443 3333 232 4689999999999888766 58999999987 5666677766542 344455666653
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=4.5e-16 Score=135.33 Aligned_cols=194 Identities=9% Similarity=0.048 Sum_probs=139.1
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEE-EEEeCCC
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPIL-ASGSKDK 201 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l-~s~~~dg 201 (344)
.+++++++.++++++.++.|++||..+ .+....+..+. ..+..++|+|+++.+ +++..++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVAS------------------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTT------------------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCC------------------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC
Confidence 456788899999999999999999864 23344444332 256789999999855 5666789
Q ss_pred cEEEEEcCCCccccceeeecc----ccceEEEEEecCCCEEEEEeCC------------CEEEEE---------------
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQE----STFVRCLSFHPCGDYMVVGTDH------------FVLRLY--------------- 250 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~------------~~i~~~--------------- 250 (344)
.|.+||+.+++....+..... ...+..++|+|+|+++++++.+ +.+.+|
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 999999988765443332111 2336789999999999998865 788877
Q ss_pred ----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC-----------------------------------
Q psy15157 251 ----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD----------------------------------- 285 (344)
Q Consensus 251 ----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------------------------------- 285 (344)
+++|+ +++++. .|.+||..+++.+..+.....
T Consensus 146 ~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 146 MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 67888 445443 499999999887765542210
Q ss_pred -------------------------------CccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 286 -------------------------------GAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 286 -------------------------------~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
+..+.+++|+| +|++++++ ++.|++||+.+++.+..+..... .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---~ 297 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT---Y 297 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC---C
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC---c
Confidence 01345677889 99999988 88999999999999888875432 2
Q ss_pred eeeeeeccCC
Q psy15157 334 FELTLTVDAD 343 (344)
Q Consensus 334 ~~~~~~~~~~ 343 (344)
..+.++++++
T Consensus 298 ~~~~~s~dg~ 307 (349)
T 1jmx_B 298 YCVAFDKKGD 307 (349)
T ss_dssp CEEEECSSSS
T ss_pred cceEECCCCC
Confidence 3456666543
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=2.8e-16 Score=150.81 Aligned_cols=204 Identities=11% Similarity=0.127 Sum_probs=142.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-------------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE------------- 180 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------- 180 (344)
.+..|...+.+++|||||++|++++ ++.|++||+.++.. ......+..
T Consensus 146 ~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~------------------~~~~~~~~~~~~~g~~~~v~~~ 206 (741)
T 2ecf_A 146 QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ------------------MQLTADGSTTIGNGIAEFVADE 206 (741)
T ss_dssp BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE------------------EECCCCCCSSEEESCCCHHHHH
T ss_pred EcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE------------------EEeccCCccceeccccceeeee
Confidence 3567888999999999999999987 56899999975322 111112221
Q ss_pred ---CeEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEEcCC-Cccccceeeeccc
Q psy15157 181 ---EVTCLEFHPSAPILASGSKDK---------------------------------TVKMFDYSK-SSVRKAHKTIQES 223 (344)
Q Consensus 181 ---~v~~~~~~~~~~~l~s~~~dg---------------------------------~i~iwd~~~-~~~~~~~~~~~~~ 223 (344)
.+.+++|+|||+.|++++.|+ .|++||+.+ ++.........+.
T Consensus 207 ~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 286 (741)
T 2ecf_A 207 EMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD 286 (741)
T ss_dssp HSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS
T ss_pred ccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc
Confidence 247899999999999888776 789999988 7543222111356
Q ss_pred cceEEEEEecCCCEEEEEeC-----CCEEEE---------------------------EcCCCCEEEEEeCCCcEEEEeC
Q psy15157 224 TFVRCLSFHPCGDYMVVGTD-----HFVLRL---------------------------YSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~-----~~~i~~---------------------------~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
..+..++| |+|++|+++.. +..+.+ |+|+|+++++++.||.++||.+
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 77899999 99999987653 233333 4788999999999998888866
Q ss_pred C-CCeEEeeecccCCCccEEEE-EEccCCCEEEE-EeCCC--cEEEEEcCC-CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 272 V-SSKCVATFSKAHDGAEISSL-TFTRNGKYLLS-SGKDS--LVKLWELSS-ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 272 ~-~~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~s-~~~dg--~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
. .++ ...+..+ . ..+.++ .|+|+|+.|+. ++.++ .++||++.. +..+..+.+.. ....+.+++|++
T Consensus 366 ~~~~~-~~~l~~~-~-~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~---~~~~~~~spdg~ 437 (741)
T 2ecf_A 366 DSKGK-AAALTHG-N-WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAP---GMHSASFARNAS 437 (741)
T ss_dssp CSSSC-EEESCCS-S-SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSC---SEEEEEECTTSS
T ss_pred cCCCC-eeeeeec-c-eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCC---CceEEEECCCCC
Confidence 5 344 5555433 3 357777 59999998754 55555 899999875 66566666522 234666676654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=2e-16 Score=151.14 Aligned_cols=199 Identities=17% Similarity=0.188 Sum_probs=140.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.+++|||| +.++.+ .++.|++||+.++ ....+..+...+.+++|+|+|+.|+++ .
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~-------------------~~~~l~~~~~~~~~~~~SpdG~~la~~-~ 139 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR-------------------KVTYLFDTNEETASLDFSPVGDRVAYV-R 139 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT-------------------EEEEEECCTTCCTTCEECTTSSEEEEE-E
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC-------------------ceEEccCCcccccCCcCCCCCCEEEEE-E
Confidence 57999999999 655555 3599999998642 223444566778899999999999885 6
Q ss_pred CCcEEEEEcCC-----Cccccceeeeccc-------------cceEEEEEecCCCEEEEEe-------------------
Q psy15157 200 DKTVKMFDYSK-----SSVRKAHKTIQES-------------TFVRCLSFHPCGDYMVVGT------------------- 242 (344)
Q Consensus 200 dg~i~iwd~~~-----~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~~------------------- 242 (344)
|+.|++||+.+ ++....... ... ..+.++.|+|+|++|++++
T Consensus 140 ~~~i~v~~~~~~~~~~g~~~~~~~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~ 218 (706)
T 2z3z_A 140 NHNLYIARGGKLGEGMSRAIAVTID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEA 218 (706)
T ss_dssp TTEEEEEECBCTTSCCCCCEESCSC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSC
T ss_pred CCeEEEEecCcccccCCCcEEeccC-CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 89999999988 654332211 111 1147899999999999887
Q ss_pred --------------CCCEEEEE-------------------------cCCCCEEEEEeCCC-----cEEEEeCCCCeEEe
Q psy15157 243 --------------DHFVLRLY-------------------------SSDGRIYCSGSKDG-----DIKIWDGVSSKCVA 278 (344)
Q Consensus 243 --------------~~~~i~~~-------------------------~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~ 278 (344)
.+..+.+| +|+|+.+++++.++ .|++||..+++...
T Consensus 219 ~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 219 ESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred ceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 33445554 78999999888776 89999999984333
Q ss_pred eecccCCCc---cEEEEEEcc--CCCEEEEEeCCCcEEEEEcC-CCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 279 TFSKAHDGA---EISSLTFTR--NGKYLLSSGKDSLVKLWELS-SARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 279 ~~~~~~~~~---~v~~i~~~~--~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+....... .+.++.|+| ||++|++++.|+.++||++. +++.+..+..+...... .+.+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~-~~~~spdg 367 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN-FAGFDPKG 367 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE-EEEECTTS
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe-eeEEcCCC
Confidence 332122111 246789999 99999999999999999887 67777777665322111 14555554
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=1.3e-15 Score=131.76 Aligned_cols=187 Identities=11% Similarity=0.115 Sum_probs=135.2
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcC-CeEEEEEcCCCCEE-EEEeCCCcEEEEEc
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE-EVTCLEFHPSAPIL-ASGSKDKTVKMFDY 208 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l-~s~~~dg~i~iwd~ 208 (344)
+++++++.++.|.+||..+ .+....+. ++.. .+..++|+|+++.+ ++++.++.|.+||+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK------------------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEEETTTEEEEEETTT------------------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cEEEEcCCCCeEEEEECCC------------------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 4789999999999999864 23344443 2222 47889999999755 56666899999999
Q ss_pred CCCccccceeeec---cccceEEEEEecCCCEEEEEe------------CCCEEEEE----------------------c
Q psy15157 209 SKSSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGT------------DHFVLRLY----------------------S 251 (344)
Q Consensus 209 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~------------~~~~i~~~----------------------~ 251 (344)
.+++....+.... +...+.+++|+|+|++++++. .++.+.+| +
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s 143 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWA 143 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEEC
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEEC
Confidence 8886554443221 112567799999999999886 56888887 6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC--C--------------------------------------------
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--D-------------------------------------------- 285 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~-------------------------------------------- 285 (344)
|+|++++++ ++.|++||+.+++....+.... .
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 888877777 6889999999887765443211 0
Q ss_pred ------------------CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 286 ------------------GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 ------------------~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
...+.+++|+|+|++|+++ ++.|++||+.+++.+..+..+.. ...+.++++++
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~ 292 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHS---YYSVNVSTDGS 292 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSC---CCEEEECTTSC
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCc---eeeEEECCCCC
Confidence 0124568999999999988 79999999999999888875432 24455665543
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=2.6e-15 Score=129.82 Aligned_cols=194 Identities=11% Similarity=0.086 Sum_probs=132.8
Q ss_pred EECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC-CCcE
Q psy15157 126 AFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK-DKTV 203 (344)
Q Consensus 126 ~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i 203 (344)
.|.++++ .+++++.++.|.+||..+ .+....+..+...+ +++|+|+++.+++++. ++.|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i 64 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDT------------------LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTL 64 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTT------------------CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcc------------------cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeE
Confidence 4555444 578888999999999864 33444555555666 9999999996665555 8999
Q ss_pred EEEEcCCCcc-ccceeeeccccceEEEEEecCCCEEEEEeCCC---EEEEE----------------------cCCCCEE
Q psy15157 204 KMFDYSKSSV-RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---VLRLY----------------------SSDGRIY 257 (344)
Q Consensus 204 ~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~i~~~----------------------~~~~~~l 257 (344)
.+||+.+++. .... ..+..+..+++|+|+|++++++..++ .+.+| +|+|+++
T Consensus 65 ~~~d~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l 142 (331)
T 3u4y_A 65 VQIETQLEPPKVVAI--QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGL 142 (331)
T ss_dssp EEEECSSSSCEEEEE--EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCE
T ss_pred EEEECCCCceeEEec--ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEE
Confidence 9999998765 3222 22334444499999999999655553 88887 7888754
Q ss_pred -EEEeCCCc-EEEEeCCCCeEEeee--cccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCee---EEEeecCCC
Q psy15157 258 -CSGSKDGD-IKIWDGVSSKCVATF--SKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSARC---LIAYTGAGS 329 (344)
Q Consensus 258 -~~~~~dg~-i~iwd~~~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~~---~~~~~~~~~ 329 (344)
+++..++. |.+|++.....+... .....+..+..++|+|+|++++++ ..++.|++||+.+++. +..+..+..
T Consensus 143 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 222 (331)
T 3u4y_A 143 ILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL 222 (331)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC
T ss_pred EEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC
Confidence 45556688 999998754332111 000112357999999999976555 4689999999999988 777775432
Q ss_pred cCceeeeeeeccCC
Q psy15157 330 MGQQFELTLTVDAD 343 (344)
Q Consensus 330 ~~~~~~~~~~~~~~ 343 (344)
...+.+++|+.
T Consensus 223 ---~~~~~~spdg~ 233 (331)
T 3u4y_A 223 ---PGTIVVSRDGS 233 (331)
T ss_dssp ---CCCEEECTTSS
T ss_pred ---CceEEECCCCC
Confidence 34556666654
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=2.1e-16 Score=147.56 Aligned_cols=183 Identities=11% Similarity=0.032 Sum_probs=131.5
Q ss_pred CCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s 196 (344)
..+|++++|+|||++||+++. ||+++||++++ .. ...+..|. ..+..++|+|+ +++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~------------------g~-~~~lt~~~~~~~~~~~~spd-~~l~~ 80 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG------------------GE-TVKLNREPINSVLDPHYGVG-RVILV 80 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET------------------TE-EEECCSSCCSEECEECTTCS-EEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC------------------CC-cEeeecccccccccccCCCC-eEEEE
Confidence 457999999999999999887 99999999742 22 33444454 68999999999 77777
Q ss_pred EeC---CCcEEEEEcCC--CccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE--------------------
Q psy15157 197 GSK---DKTVKMFDYSK--SSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 197 ~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~-------------------- 250 (344)
++. +....+|.+.. ..... . ......+...+|+|+|+.+ ++...++.+.+|
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~--~-l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~ 157 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQ--R-LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVS 157 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCE--E-CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEE
T ss_pred eccCCCCcceEEEEEeccCCCccc--c-ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEE
Confidence 775 55567766544 21111 1 1122234466888888643 333333333354
Q ss_pred cCCCCEEEEEeCC----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCeeEEEe
Q psy15157 251 SSDGRIYCSGSKD----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS--LVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~ 324 (344)
+|||+++++++.+ +.|++||+.+++.. .+. .+. ..+..++|+|||++|++++.++ .|++||+.+++.. .+
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~ 233 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-SGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL 233 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC-CSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee-cCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence 7999999988877 78999999988765 343 333 4689999999999999888888 8999999999887 66
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
.++.
T Consensus 234 ~~~~ 237 (582)
T 3o4h_A 234 ELPS 237 (582)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 6654
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.71 E-value=2.3e-16 Score=151.02 Aligned_cols=193 Identities=7% Similarity=0.043 Sum_probs=132.6
Q ss_pred eEEecCCC---ceEEEEECCCCCEEEEEeCC---------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC
Q psy15157 113 AYVTSHKS---PCRAGAFSIDGQLCATGSVD---------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE 180 (344)
Q Consensus 113 ~~~~~h~~---~v~~~~~s~~~~~l~sg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 180 (344)
..+.+|.. .|.+++|||||++|++++.+ +.+.+||+.++.. ..+....+|..
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----------------~~l~~~~~~~~ 114 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP----------------QSLDPPEVSNA 114 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----------------EECCCTTCCSC
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce----------------EeccCCccccc
Confidence 44556654 49999999999999999875 7888999975321 11112234555
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeecccc------------------ceEEEEEecCCCEEEEEe
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST------------------FVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~ 242 (344)
.+..++|+|+|+.|+.++. +.|++||+.+++...... .+.. .+.+++|+|+|++|++++
T Consensus 115 ~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~--~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS--TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC--CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec--CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 6889999999999998886 799999998876533222 1111 237899999999999876
Q ss_pred CCC----------------------------------EEEE-----------------------------EcCCCCEEEE
Q psy15157 243 DHF----------------------------------VLRL-----------------------------YSSDGRIYCS 259 (344)
Q Consensus 243 ~~~----------------------------------~i~~-----------------------------~~~~~~~l~~ 259 (344)
.++ .+.+ |+|+|+++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 432 4444 3678888866
Q ss_pred EeC----CCcEEEEeCCCCeEEeeecccCCCccE----EEEEEccCCCEEEE--EeCCC------cEEEEE-cCCCe--e
Q psy15157 260 GSK----DGDIKIWDGVSSKCVATFSKAHDGAEI----SSLTFTRNGKYLLS--SGKDS------LVKLWE-LSSAR--C 320 (344)
Q Consensus 260 ~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v----~~i~~~~~~~~l~s--~~~dg------~i~vwd-~~~~~--~ 320 (344)
.+. +..|++||+.+++....+...+. ..+ ..++|+|||+.|+. +..++ .|++|| ..+++ +
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 350 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESE-AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN 350 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECS-SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccC-CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc
Confidence 643 35799999999987665543332 233 37899999997764 45666 577777 34444 1
Q ss_pred EEEee
Q psy15157 321 LIAYT 325 (344)
Q Consensus 321 ~~~~~ 325 (344)
...+.
T Consensus 351 ~~~l~ 355 (723)
T 1xfd_A 351 IQSIT 355 (723)
T ss_dssp CCBSC
T ss_pred eeEee
Confidence 44554
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=2.9e-16 Score=156.20 Aligned_cols=209 Identities=15% Similarity=0.116 Sum_probs=150.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc-CCCCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH-PSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~ 193 (344)
+..|. .+.+.+|+|+|++++++ .++.|.+|++...... ..... ..........|...+.+++|+ |+|+.
T Consensus 241 l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~-------~~~~~~~~~~~~~~v~~~~~S~pdG~~ 310 (1045)
T 1k32_A 241 HTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIG-------DLESPEDRIISIPSKFAEDFSPLDGDL 310 (1045)
T ss_dssp CCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCC-------CCCBCCSEEEECGGGGEEEEEECGGGC
T ss_pred ecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccC-------cccccccccccccccceeeecCCCCCE
Confidence 44454 46778999999999888 4899999998422111 00000 000000111255678999999 99998
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeecccc-ceEEEEEecCCCEEEEEeCCCEEE-EE---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQEST-FVRCLSFHPCGDYMVVGTDHFVLR-LY--------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~i~-~~--------------------- 250 (344)
|++++ ++.|.+|++.++.... ...+.. .+..++|+ +|+.+++++.+..+. +|
T Consensus 311 la~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~ 385 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVLK---VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMG 385 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEEE---CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEE
T ss_pred EEEEE-cCEEEEEcCCCCceEE---ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeE
Confidence 88887 8899999998765332 223444 78899999 999988888777776 54
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC----------cEEEEEcCCCe
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS----------LVKLWELSSAR 319 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg----------~i~vwd~~~~~ 319 (344)
+|+|+++++++.++.|++||+.+++...... .+. ..+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~-~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETGKPTVIER-SRE-AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS-SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ECCCCCEEEEECCCCeEEEEECCCCceEEecc-CCC-CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 7899999999999999999999998776664 343 3588999999999999887654 89999999987
Q ss_pred eEEEeecCCCcCceeeeeeeccCC
Q psy15157 320 CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+..+... .....|++|+.
T Consensus 464 -~~~l~~~~~~--~~~~~~spdG~ 484 (1045)
T 1k32_A 464 -IFAATTENSH--DYAPAFDADSK 484 (1045)
T ss_dssp -EEECSCSSSB--EEEEEECTTSC
T ss_pred -EEEeeCCCcc--cCCceEcCCCC
Confidence 5666665433 34455666654
No 155
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=1.6e-14 Score=122.26 Aligned_cols=204 Identities=10% Similarity=0.171 Sum_probs=146.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe------cCCcCCeEEEEE-cC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL------YDHIEEVTCLEF-HP 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~-~~ 189 (344)
+|-..+.+++++++++++++...++.|.+||... .....+ .++...+.++++ .+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-------------------~~~~~~~~~~~~~~~~~~p~~i~~~~~ 87 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-------------------RFKFQFGECGKRDSQLLYPNRVAVVRN 87 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-------------------CEEEEECCBSSSTTCBSSEEEEEEETT
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC-------------------cEEEEecccCCCcccccCceEEEEEcC
Confidence 5567899999999999999988899999999752 122222 234567899999 56
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 SAPILASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.++++... ++.|++|| .+++....+. ......+..++++++|+.+++...++.+.+|
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYGQFVRKFG-ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEF 165 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTSCEEEEEC-TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSS
T ss_pred CCeEEEEcCCCCCEEEEEC-CCCcEEEEec-CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCC
Confidence 7776666643 89999999 4454433222 1233467899999999877777777778777
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-cEEEEEcCCCeeEEE
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-LVKLWELSSARCLIA 323 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~ 323 (344)
+++|+++++...++.|++||. .++.+..+........+..++++++|+++++...++ .|++||. +++.+..
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 556777777777889999997 455555554221113589999999999888888776 9999995 6788888
Q ss_pred eecCCCcCceeeeeeeccCC
Q psy15157 324 YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+........+.+++++.
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~ 263 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGS 263 (286)
T ss_dssp EEESSCCSCEEEEEEETTTE
T ss_pred EcccCCCCcceeEEECCCCc
Confidence 87765544455666666543
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=4.9e-14 Score=123.47 Aligned_cols=199 Identities=14% Similarity=0.157 Sum_probs=128.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+...+..+++ +++++++++ .++.|.+|++............ ... . ..-......+...+.+++|+|+++++
T Consensus 96 ~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-~~~--~-g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 96 KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV-IEF--K-GSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE-EEC--C-CCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee-EEc--c-CCCCCccccCCCcceEEEECCCCCEE
Confidence 345567778888 788777766 5889999999642111100000 000 0 00000011233457889999999966
Q ss_pred EEEe-CCCcEEEEEcCCCcc------c-c----ceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE-----------
Q psy15157 195 ASGS-KDKTVKMFDYSKSSV------R-K----AHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------- 250 (344)
Q Consensus 195 ~s~~-~dg~i~iwd~~~~~~------~-~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------- 250 (344)
++++ .++.|.+|++..... . . ..........+..++|+|+|+++++++ .++.+.+|
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 5544 589999999876432 1 0 111223345678999999999888877 57777776
Q ss_pred -----------------cCCCCEEEEEeCC--CcEEEEeCC--CCe--EEeeecccCCCccEEEEEEccCCCEEEEEe-C
Q psy15157 251 -----------------SSDGRIYCSGSKD--GDIKIWDGV--SSK--CVATFSKAHDGAEISSLTFTRNGKYLLSSG-K 306 (344)
Q Consensus 251 -----------------~~~~~~l~~~~~d--g~i~iwd~~--~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~ 306 (344)
+|+|+++++++.+ +.|.+|++. +++ .+..+.. +..+.+++|+|+|++|++++ .
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETT
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECC
Confidence 7899988776654 899999985 444 3333432 34578999999999998887 6
Q ss_pred CCcEEEEEc--CCCeeEEE
Q psy15157 307 DSLVKLWEL--SSARCLIA 323 (344)
Q Consensus 307 dg~i~vwd~--~~~~~~~~ 323 (344)
++.|.+|++ .+|+....
T Consensus 327 ~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 327 TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp TTEEEEEEECTTTCCEEEC
T ss_pred CCCEEEEEEECCCCcEeec
Confidence 789999654 56665443
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=3.9e-14 Score=124.08 Aligned_cols=207 Identities=13% Similarity=0.177 Sum_probs=136.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVD----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
|...+..++|+|+|++|++++.+ +.|.+|+++... .....+.....+......+++ ++++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~--------------g~~~~~~~~~~~~~~p~~~~~--dg~~ 111 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK--------------GTLHLLNTQKTMGADPCYLTT--NGKN 111 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT--------------TEEEEEEEEECSSSCEEEEEE--CSSE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC--------------CcEEEeeEeccCCCCcEEEEE--CCCE
Confidence 77788999999999999999886 799999986310 011233344445667778888 7776
Q ss_pred EEEEe-CCCcEEEEEcCCCcccccee-eec-----------cccceEEEEEecCCCEEEEEeC-CCEEEE----------
Q psy15157 194 LASGS-KDKTVKMFDYSKSSVRKAHK-TIQ-----------ESTFVRCLSFHPCGDYMVVGTD-HFVLRL---------- 249 (344)
Q Consensus 194 l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~-----------~~~~v~~~~~~~~~~~l~~~~~-~~~i~~---------- 249 (344)
|++++ .++.|.+|++.......... ... ....+.+++|+|+|++++++.. ++.+.+
T Consensus 112 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 112 IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 66665 68899999997543222111 101 1223578999999998776543 333222
Q ss_pred --------------------------EcCCCCEEEEEe-CCCcEEEEeCCCCeE--Eeeeccc-CCCccEEEEEEccCCC
Q psy15157 250 --------------------------YSSDGRIYCSGS-KDGDIKIWDGVSSKC--VATFSKA-HDGAEISSLTFTRNGK 299 (344)
Q Consensus 250 --------------------------~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~-~~~~~v~~i~~~~~~~ 299 (344)
|+|+|+++++++ .++.|.+||+.+++. +..+... ........++|+|||+
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~ 271 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK 271 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC
Confidence 477888777766 689999999987754 2222211 1113468999999999
Q ss_pred EEEEEeC--CCcEEEEEcC--CCe--eEEEeecCCCcCceeeeeeeccCC
Q psy15157 300 YLLSSGK--DSLVKLWELS--SAR--CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 300 ~l~s~~~--dg~i~vwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+|++++. ++.|.+|++. +++ .+..+.. + .....+.+++|++
T Consensus 272 ~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g--~~~~~~~~spdg~ 318 (361)
T 3scy_A 272 YLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-G--IHPRNFIITPNGK 318 (361)
T ss_dssp EEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S--SCCCEEEECTTSC
T ss_pred EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C--CCCceEEECCCCC
Confidence 9977665 4899999996 454 3444443 2 2334566666654
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=4.1e-15 Score=148.00 Aligned_cols=203 Identities=11% Similarity=0.143 Sum_probs=149.5
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...+.++.|+++ .++++++.|+.++||.++. .......+..|. .+...+|+|+|+
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~-----------------~g~~~~~l~~~~-~~~~~~~SpDG~ 257 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDL-----------------DGKDLRKHTSFT-DYYPRHLNTDGR 257 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEET-----------------TSCSCEECCCCC-SSCEEEEEESSS
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeC-----------------CCCcceEecCCC-CcceeeEcCCCC
Confidence 345789999999999988 7778888899999998752 111223444454 356779999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceee---------eccccceEEEEEe-cCCCEEEEEeCCCEEEEE------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKT---------IQESTFVRCLSFH-PCGDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~~------------ 250 (344)
.|+.+. ++.|++||+...... .+.. ..+...+.+++|+ |+|+++++++ ++.+.+|
T Consensus 258 ~la~~~-~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~ 334 (1045)
T 1k32_A 258 RILFSK-GGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPE 334 (1045)
T ss_dssp CEEEEE-TTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSC
T ss_pred EEEEEe-CCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccC
Confidence 888874 899999998443322 1111 0123468899999 9999998887 5556555
Q ss_pred -----------cCCCCEEEEEeCCCcEE-EEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -----------SSDGRIYCSGSKDGDIK-IWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+ +|+.++.++.++.+. +||..+++... +. .+. ..+.+++|+|||++|++++.++.|++||+.++
T Consensus 335 ~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~~-~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FE-ENL-GNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp CSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CC-CCC-CSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ec-CCc-cceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 4 567788888888888 99998876543 33 333 46999999999999999999999999999999
Q ss_pred eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 319 RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+....+.+|... ...+.+++|+.
T Consensus 411 ~~~~~~~~~~~~--v~~~~~SpDG~ 433 (1045)
T 1k32_A 411 KPTVIERSREAM--ITDFTISDNSR 433 (1045)
T ss_dssp CEEEEEECSSSC--CCCEEECTTSC
T ss_pred ceEEeccCCCCC--ccceEECCCCC
Confidence 988877666443 34556666654
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=3.8e-14 Score=122.67 Aligned_cols=206 Identities=11% Similarity=0.115 Sum_probs=144.5
Q ss_pred CCceEEEEECCCCCEEEEEeCC------------------------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVD------------------------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (344)
-+.|.+++++++|+++++.+.+ +.|.+||..+ +.....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~------------------g~~~~~ 84 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN------------------AEILQS 84 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT------------------CCEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC------------------CeEEec
Confidence 4679999999999999988877 3688888753 223333
Q ss_pred ec-CCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-cccceee-------eccccceEEEEEec-CCCEEEEEe-C
Q psy15157 175 LY-DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VRKAHKT-------IQESTFVRCLSFHP-CGDYMVVGT-D 243 (344)
Q Consensus 175 ~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~~~-~ 243 (344)
+. ++......++++++++++++...++.|++||..... ....+.. ..+......++++| +|..+++.+ .
T Consensus 85 ~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 85 SGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp ECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred cCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 32 455678999999999999998889999999986531 2221111 12233578999999 777777775 6
Q ss_pred CCEEEEE--------------------------------cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 244 HFVLRLY--------------------------------SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 244 ~~~i~~~--------------------------------~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
++.|++| +++ +.++++...++.|++||..+++.+..+.....+..+.
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 8888877 344 5666677778889999998888888775443345688
Q ss_pred EEEEcc------CCCEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcCceeeeeeeccC
Q psy15157 291 SLTFTR------NGKYLLSSGKDSLVKLWELSSARCLIAYTGA-GSMGQQFELTLTVDA 342 (344)
Q Consensus 291 ~i~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 342 (344)
+++|+| +|+..++...+..|++||+.+++.+..+... ........+.+++++
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 999999 3333333344568999999999999988522 223334455555554
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.66 E-value=6.2e-16 Score=147.97 Aligned_cols=177 Identities=14% Similarity=0.190 Sum_probs=126.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---CeEEEEEcCCCCEEEEEeC-
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---EVTCLEFHPSAPILASGSK- 199 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~- 199 (344)
.++|+|+|++++++ .|+.|++||+.+ +.....+..|.. .+.+++|+|||+.|++++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~------------------g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~ 80 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIET------------------GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDY 80 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSS------------------CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCC------------------CcEEEEEccccccccceeeEEECCCCCeEEEEecC
Confidence 67899999766554 699999999964 233444444433 4889999999999988876
Q ss_pred --------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE------------------------
Q psy15157 200 --------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL------------------------ 247 (344)
Q Consensus 200 --------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i------------------------ 247 (344)
++.|++||+.+++....... ...+..++|+|+|+.|+.+.. +.|
T Consensus 81 ~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~-~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 81 SKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQ-NNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEET-TEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred ceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEEC-CeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 78999999998765211111 235788999999999988752 222
Q ss_pred -----------------EEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCeE
Q psy15157 248 -----------------RLYSSDGRIYCSGSKDG----------------------------------DIKIWDGVSSKC 276 (344)
Q Consensus 248 -----------------~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~ 276 (344)
..|+|||++|++++.|. .|++||+.+++.
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 34688999999988652 788999998864
Q ss_pred E--eeec-----ccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEE----cCCCeeEEEe
Q psy15157 277 V--ATFS-----KAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWE----LSSARCLIAY 324 (344)
Q Consensus 277 ~--~~~~-----~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd----~~~~~~~~~~ 324 (344)
. ..+. ..+. ..+.+++|+||++++++.... ..|++|| +.++++...+
T Consensus 237 ~~~~~~~~~~~~~~~~-~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 237 VGPQEVPVPAMIASSD-YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp HCCEECCCCHHHHTSC-EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred cceeEccCCccCCCCc-ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 2 1111 1233 468999999998877775433 2489999 8888776555
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=4.9e-15 Score=142.24 Aligned_cols=174 Identities=8% Similarity=0.089 Sum_probs=125.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-----CeEEEEEcCCCCEEE
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE-----EVTCLEFHPSAPILA 195 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~ 195 (344)
....++|+|||++++++ |++|++||+.++ .....+.+|.. ...+++|||||+.|+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYG------------------NSSVFLENSTFDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTC------------------CEEEEECTTTTTTCCSCCCEEEECTTSSEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCC------------------ceEEEEechhhhhhcccccceEECCCCCEEE
Confidence 45578999999999986 999999999653 23344555543 234588999999999
Q ss_pred EEeCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE-------------------
Q psy15157 196 SGSKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL------------------- 247 (344)
Q Consensus 196 s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i------------------- 247 (344)
.++.+ +.+.+||+.+++... ...+...+...+|||+|+.|+.+.. +.|
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBT
T ss_pred EEECCeeeEEEccceEEEEEECCCCcEEE---cccCCCcceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCc
Confidence 88876 567799999986543 2334567899999999999987742 222
Q ss_pred ----------------------EEEcCCCCEEEEEeCCC------------------------------------cEEEE
Q psy15157 248 ----------------------RLYSSDGRIYCSGSKDG------------------------------------DIKIW 269 (344)
Q Consensus 248 ----------------------~~~~~~~~~l~~~~~dg------------------------------------~i~iw 269 (344)
..|+|||+.|+.++.|. .|++|
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 23799999998875332 48889
Q ss_pred eCCC---Ce--EEeeecc-----cCCCccEEEEEEccCCCEEEEEe----CCCcEEEEEcCCCe
Q psy15157 270 DGVS---SK--CVATFSK-----AHDGAEISSLTFTRNGKYLLSSG----KDSLVKLWELSSAR 319 (344)
Q Consensus 270 d~~~---~~--~~~~~~~-----~~~~~~v~~i~~~~~~~~l~s~~----~dg~i~vwd~~~~~ 319 (344)
|+.+ ++ ....+.. .+ ...+..++|+|||+.++... .+..|++||+.+|+
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIG-DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTS-CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ECCCCCCCCcceEEEecCCccCCCC-CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 9988 73 1222321 13 34699999999999766543 23479999999987
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=3.5e-14 Score=124.70 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=123.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcC-CccccccCCCCCCcCCCCCCceEEE--ecCCcCCeEEEEEcCCCCE-
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD-RMLAKSSMESSEPQNDQQGHPVIRT--LYDHIEEVTCLEFHPSAPI- 193 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~- 193 (344)
+...+..++|+|+|++|++++.+ .|.+|++. ++ ..... ...+ +...+++|+|+++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g------------------~~~~~~~~~~~-g~~~~~~~spdg~~l 97 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT------------------EIVHEASHPIG-GHPRANDADTNTRAI 97 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT------------------EEEEEEEEECC-SSGGGGCTTSCCEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC------------------CEEEeeEeecC-CCCccEEECCCCCEE
Confidence 44578899999999999999888 99999985 22 11111 1111 23456899999984
Q ss_pred -EEEEe-------------CCCcEEEEEcCC-Cccccceeee--ccccceEEEEEecCCCEEEEEeC-CCEEEE------
Q psy15157 194 -LASGS-------------KDKTVKMFDYSK-SSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-HFVLRL------ 249 (344)
Q Consensus 194 -l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~------ 249 (344)
+++++ .+|.+.+|++.. ++........ .+...+.+++|+|+|++++++.. ++.|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 98 FLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp EEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC
Confidence 44553 689999999974 4433222221 23456889999999998887643 334433
Q ss_pred ----------------------EcCCCCEEEEEeC-CCcEEEEeCC--CCeEEe---e---ecccCCC-c-------cEE
Q psy15157 250 ----------------------YSSDGRIYCSGSK-DGDIKIWDGV--SSKCVA---T---FSKAHDG-A-------EIS 290 (344)
Q Consensus 250 ----------------------~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~---~~~~~~~-~-------~v~ 290 (344)
|+|+|+++++++. ++.|.+|+.. +++... . +.....+ . .+.
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 3677877777664 6889999764 555421 2 2111111 1 488
Q ss_pred EEE-EccCCCEEEEEeCCC------cEEEEEcC-CCeeEE
Q psy15157 291 SLT-FTRNGKYLLSSGKDS------LVKLWELS-SARCLI 322 (344)
Q Consensus 291 ~i~-~~~~~~~l~s~~~dg------~i~vwd~~-~~~~~~ 322 (344)
.++ |+|||++|++++.+. .|.+|++. +++...
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 999 999999988775432 89999996 566543
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=1.9e-14 Score=126.46 Aligned_cols=180 Identities=10% Similarity=0.121 Sum_probs=122.8
Q ss_pred ceEEEEECCCCCE--EEEEe-------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec----CCcCC
Q psy15157 121 PCRAGAFSIDGQL--CATGS-------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY----DHIEE 181 (344)
Q Consensus 121 ~v~~~~~s~~~~~--l~sg~-------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~h~~~ 181 (344)
.+.+++|+|+|++ +++++ .+|++.+|+++. .+.....+. .+...
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~-----------------~g~~~~~~~~~~~~~~~~ 146 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE-----------------TGKLEKNVQNYEYQENTG 146 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT-----------------TCCEEEEEEEEECCTTCC
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC-----------------CCcCcceEeeEEeCCCCc
Confidence 3667899999994 55653 689999999862 111211111 35567
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEEEcC-CCccccceeee--ccccceEEEEEecCCCEEEEEeC-CCEEE--------
Q psy15157 182 VTCLEFHPSAPILASGSK-DKTVKMFDYS-KSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-HFVLR-------- 248 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-~~~i~-------- 248 (344)
+.+++|+|+|++++++.. ++.|++||+. +++........ .+...+..++|+|+|+++++++. ++.+.
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 999999999998877664 6899999998 66543221211 12456889999999998877642 22111
Q ss_pred ---------------------------------E-EcCCCCEEEEEeCCC------cEEEEeCC-CCeEEeee--cccCC
Q psy15157 249 ---------------------------------L-YSSDGRIYCSGSKDG------DIKIWDGV-SSKCVATF--SKAHD 285 (344)
Q Consensus 249 ---------------------------------~-~~~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~~--~~~~~ 285 (344)
. |+|+|+++++++.+. .|.+|++. +++..... ...+
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~- 305 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP- 305 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-
Confidence 2 778888887765433 79999986 56544311 1112
Q ss_pred CccEEEEEEcc---CCCEEEEEeCC-CcEEEEEcCCC
Q psy15157 286 GAEISSLTFTR---NGKYLLSSGKD-SLVKLWELSSA 318 (344)
Q Consensus 286 ~~~v~~i~~~~---~~~~l~s~~~d-g~i~vwd~~~~ 318 (344)
...+..++|+| ||++|++++.+ +.|.+|++...
T Consensus 306 ~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 12356789999 89999998864 89999999776
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=1.5e-13 Score=116.39 Aligned_cols=181 Identities=13% Similarity=0.204 Sum_probs=130.7
Q ss_pred cCCCceEEEEE-CCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCE
Q psy15157 117 SHKSPCRAGAF-SIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 117 ~h~~~v~~~~~-s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 193 (344)
+|...+.++++ .++++++++... ++.|.+||.. ...+..+. .+...+.++++++++++
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-------------------g~~~~~~~~~~~~~~~~i~~~~~g~l 134 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-------------------GQFVRKFGATILQHPRGVTVDNKGRI 134 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-------------------SCEEEEECTTTCSCEEEEEECTTSCE
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-------------------CcEEEEecCccCCCceEEEEeCCCCE
Confidence 34567899999 577877777643 8899999953 22233332 34467899999999998
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
+++...++.|.+||.. ++....+....+...+..++++++|+.+++...++.|.+|
T Consensus 135 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 135 IVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred EEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 8888888999999965 3333222211234468899999999877777777777776
Q ss_pred -cCCCCEEEEEeCCC-cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -SSDGRIYCSGSKDG-DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+++|+++++...++ .|.+||. .++.+..+........+.+++++|+|+++++ +.|+.|++|++....
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred ECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 56778888877775 9999995 5666666653333234789999999987776 679999999986543
No 165
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.62 E-value=8.3e-15 Score=136.78 Aligned_cols=181 Identities=8% Similarity=0.071 Sum_probs=125.3
Q ss_pred EEecCC-CceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 114 YVTSHK-SPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 114 ~~~~h~-~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.+..|. ..|..++|||| +++++++. +...++|.++.. ...... .+..+. .+...+|+|
T Consensus 58 ~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~---------------~~g~~~-~l~~~~-~~~~~~~s~ 119 (582)
T 3o4h_A 58 KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS---------------RPGEEQ-RLEAVK-PMRILSGVD 119 (582)
T ss_dssp ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT---------------STTCCE-ECTTSC-SBEEEEEEE
T ss_pred eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc---------------CCCccc-cccCCC-CceeeeeCC
Confidence 345555 68999999999 78887775 556677766420 001111 222222 234568888
Q ss_pred CCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE--------------
Q psy15157 190 SAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY-------------- 250 (344)
Q Consensus 190 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~-------------- 250 (344)
+++ .+++.+.++.+.+||+.+++...... +.. .+++|+|+|++++.++.+ ..+.+|
T Consensus 120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~---~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~ 194 (582)
T 3o4h_A 120 TGEAVVFTGATEDRVALYALDGGGLRELAR---LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE 194 (582)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEEEEEE---ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS
T ss_pred CCCeEEEEecCCCCceEEEccCCcEEEeec---CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC
Confidence 875 33344444555599998875433221 222 788999999999987765 566665
Q ss_pred --------cCCCCEEEEEeCCC--cEEEEeCCCCeEEeeecccCCCccEEEEE--------EccCCCEEEEEeCCCcEEE
Q psy15157 251 --------SSDGRIYCSGSKDG--DIKIWDGVSSKCVATFSKAHDGAEISSLT--------FTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~--------~~~~~~~l~s~~~dg~i~v 312 (344)
+|||+.|+++..++ .|++||+.+++.. .+. .+. ..+..+. |+|||.++++++.|+.+++
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l 271 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE-LPS-KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAV 271 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC-CSC-SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCC-cChhhhhhccccceeEcCCCcEEEEEEcCCcEEE
Confidence 89999999888888 8999999998877 443 333 2455556 9999999999999999999
Q ss_pred EEcCCCeeEE
Q psy15157 313 WELSSARCLI 322 (344)
Q Consensus 313 wd~~~~~~~~ 322 (344)
|++ |+.+.
T Consensus 272 ~~~--g~~~~ 279 (582)
T 3o4h_A 272 FID--GERVE 279 (582)
T ss_dssp EET--TEEEC
T ss_pred EEE--CCeec
Confidence 999 76654
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=4.1e-14 Score=125.02 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=125.3
Q ss_pred eeEEecCCCceEE-----EEECCCCCEEEEEeC-CCe--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE
Q psy15157 112 TAYVTSHKSPCRA-----GAFSIDGQLCATGSV-DAS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183 (344)
Q Consensus 112 ~~~~~~h~~~v~~-----~~~s~~~~~l~sg~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 183 (344)
...+..|...+.. .+|||||++|+.++. ++. |.+||+.+ ........++...+.
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~------------------g~~~~lt~~~~~~~~ 84 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT------------------QVATQLTEGRGDNTF 84 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT------------------CEEEECCCSSCBCSS
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC------------------CceEEeeeCCCCCcc
Confidence 3445666665655 889999999998887 674 77777753 333444455655555
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEE--EEecCCCEEEEEe-------------------
Q psy15157 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL--SFHPCGDYMVVGT------------------- 242 (344)
Q Consensus 184 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~------------------- 242 (344)
.++|+|+++.|+.++.++.|++||+.+++....... +...+... .++|++.+++...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV--PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec--hhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 678999999999999999999999998865433322 22223222 3477777776321
Q ss_pred ---CCCEEEE----------------------EcC-CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 243 ---DHFVLRL----------------------YSS-DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 243 ---~~~~i~~----------------------~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
.+..+.+ |+| +|+.++..+.+ ..|.++|...++... +.....+..+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~ 241 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGESCT 241 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEEEE
T ss_pred ccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCcccc
Confidence 1233333 488 99988877653 378888877665433 33233223578
Q ss_pred EEEEccCCCEEEEEeC-CC----cEEEEEcCCCee
Q psy15157 291 SLTFTRNGKYLLSSGK-DS----LVKLWELSSARC 320 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~~-dg----~i~vwd~~~~~~ 320 (344)
.+.|+|||+.|+..+. ++ .|++||+.+++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 8999999997765432 22 399999999874
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=9.7e-14 Score=121.66 Aligned_cols=202 Identities=11% Similarity=0.083 Sum_probs=130.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------ 177 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 177 (344)
.+..+..+ .++|+|||+++++++ .+++|.+||..+. +.+..+..
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~------------------~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL------------------TFEKEISLPPKRVQ 105 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC------------------CEEEEEEECTTBCC
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC------------------cEEEEEEcCccccc
Confidence 34455444 899999999998886 3678999998642 23333321
Q ss_pred CcCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCccccc-eeeecc-------ccceEEEEEecCCCEE---------
Q psy15157 178 HIEEVTCLEFHPSAPILASGSK--DKTVKMFDYSKSSVRKA-HKTIQE-------STFVRCLSFHPCGDYM--------- 238 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~-------~~~v~~~~~~~~~~~l--------- 238 (344)
+......++++|++++|+++.. +++|.+||+.+++.... +..... ...-.-++++++|..+
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 2234567899999998888764 58899999988765433 211000 0000112222222222
Q ss_pred -----------------------------EEEeCCCEEEE-----------------------------------EcCCC
Q psy15157 239 -----------------------------VVGTDHFVLRL-----------------------------------YSSDG 254 (344)
Q Consensus 239 -----------------------------~~~~~~~~i~~-----------------------------------~~~~~ 254 (344)
+..+.++.+.+ +++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT
T ss_pred EeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC
Confidence 22222222222 24555
Q ss_pred CEEEEEeC-----------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--eeE
Q psy15157 255 RIYCSGSK-----------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA--RCL 321 (344)
Q Consensus 255 ~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~ 321 (344)
+.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|||++|++++. +.|.+||+.++ +.+
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 66555432 3479999999999998886432 789999999999999887 99999999999 999
Q ss_pred EEeecCCCcCceeeeeeeccC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.++...+.... .+.+++++
T Consensus 341 ~~i~~~G~~P~--~~~~~p~G 359 (361)
T 2oiz_A 341 RTIEGAAEASL--QVQFHPVG 359 (361)
T ss_dssp EEETTSCSSEE--EEEECCCS
T ss_pred EEeccCCCCcE--EEEecCCC
Confidence 98865544433 34555554
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=3.2e-12 Score=110.55 Aligned_cols=195 Identities=8% Similarity=0.071 Sum_probs=136.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.++...+.+++|+++|++++++..++.|.+||..++ ........+...+.++++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~------------------~~~~~~~~~~~~~~~i~~~~dg~l 100 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK------------------EIKRPFVSHKANPAAIKIHKDGRL 100 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC------------------CEEEEEECSSSSEEEEEECTTSCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC------------------cEEEEeeCCCCCcceEEECCCCcE
Confidence 45567778899999999998888888999999998532 222222245678999999999998
Q ss_pred EEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC------CCEEEE--------------
Q psy15157 194 LASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD------HFVLRL-------------- 249 (344)
Q Consensus 194 l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-------------- 249 (344)
+++...+ +.|.+||..++..............+.+++++|+|+++++... .+.+..
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 8877766 6899999887654322211123456889999999987776542 122322
Q ss_pred --------EcCCCCEE-EEEeCCCcEEEEeCCC-CeEEeee-----cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 250 --------YSSDGRIY-CSGSKDGDIKIWDGVS-SKCVATF-----SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 250 --------~~~~~~~l-~~~~~dg~i~iwd~~~-~~~~~~~-----~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
|+++|+.+ ++.+.++.|.+||..+ +.....+ ........+..++++++|+++++...++.|.+||
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 36788755 4555678999999864 3322111 0011113578899999999888887889999999
Q ss_pred cCCCeeEEEeecC
Q psy15157 315 LSSARCLIAYTGA 327 (344)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (344)
. +++.+..+..+
T Consensus 261 ~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 261 K-RGYPIGQILIP 272 (333)
T ss_dssp T-TSCEEEEEECT
T ss_pred C-CCCEEEEEEcC
Confidence 8 67777777654
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=9.3e-13 Score=112.05 Aligned_cols=191 Identities=7% Similarity=0.005 Sum_probs=138.5
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+..+.....+++|+|+|+ +++++..++.|..|+..+ . ...+..+...+.+++++++++
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~------------------~--~~~~~~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG------------------Q--LSPEMHPSHHQNGHCLNKQGH 81 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS------------------C--EEEEESSCSSEEEEEECTTCC
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC------------------C--eEEEECCCCCcceeeECCCCc
Confidence 3455667789999999998 788888899999999863 1 344556777899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEE----Ee-------------CCCEEEE----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVV----GT-------------DHFVLRL---- 249 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~-------------~~~~i~~---- 249 (344)
++++...++.|.+||..+++......... ....+..++++|+|+++++ |+ ..+.+..
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 88877777899999997776432221111 1224567899999988776 22 1223332
Q ss_pred -----------------EcCCCCEEEEEeCCCcEEEEeCC-CCeE---EeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 250 -----------------YSSDGRIYCSGSKDGDIKIWDGV-SSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 250 -----------------~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
|+|+|+.+++.+.++.|.+||+. +++. ...+ .... ..+.+++++++|+++++. ++
T Consensus 162 g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~-~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 162 GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEP-GKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSS-SCCCSEEEBTTSCEEEEE--TT
T ss_pred CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCC-CCCCeEEECCCCCEEEEc--CC
Confidence 37889888777888999999986 4544 2333 2222 346789999999866665 88
Q ss_pred cEEEEEcCCCeeEEEeecCCC
Q psy15157 309 LVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~ 329 (344)
.|.+||.. ++.+..+..+..
T Consensus 238 ~v~~~~~~-g~~~~~~~~~~~ 257 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRVLTPQT 257 (296)
T ss_dssp EEEEECTT-SCEEEEEECSSC
T ss_pred eEEEECCC-CCEEEEEECCCC
Confidence 89999986 888888877655
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=4.1e-14 Score=135.34 Aligned_cols=183 Identities=15% Similarity=0.116 Sum_probs=123.3
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 121 PCRAGAFSIDGQLCATGSV---------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.|.+++|||||++|++++. ++.|++||+.++..... ..+ ...+..++|+|||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~----------------~~l---~~~~~~~~~SPDG 121 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG----------------NEL---PRPIQYLCWSPVG 121 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS----------------SCC---CSSBCCEEECSST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc----------------eec---CcccccceECCCC
Confidence 3999999999999999876 78999999975422100 011 2457889999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccce-----------------EEEEEecCCCEEEEEeCCC---------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV-----------------RCLSFHPCGDYMVVGTDHF--------- 245 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~~~--------- 245 (344)
+.|+.+. |+.|++||+.+++..... ..++...+ .+++|+|+|++|++++.+.
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 9999876 789999999887643221 11221111 4799999999999876431
Q ss_pred -------------------------EEEE-------------------------------EcCCCCEEEEEeCC----Cc
Q psy15157 246 -------------------------VLRL-------------------------------YSSDGRIYCSGSKD----GD 265 (344)
Q Consensus 246 -------------------------~i~~-------------------------------~~~~~~~l~~~~~d----g~ 265 (344)
.+.+ |+|+++++++.... ..
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~ 279 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSV 279 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEE
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEE
Confidence 3333 46777777664433 24
Q ss_pred EEEEe----CCCCeEEeeec---ccCCCccEE-----EEEEccCCCEEEE--EeCCC--cEEEEEcCCCeeEEEeec
Q psy15157 266 IKIWD----GVSSKCVATFS---KAHDGAEIS-----SLTFTRNGKYLLS--SGKDS--LVKLWELSSARCLIAYTG 326 (344)
Q Consensus 266 i~iwd----~~~~~~~~~~~---~~~~~~~v~-----~i~~~~~~~~l~s--~~~dg--~i~vwd~~~~~~~~~~~~ 326 (344)
|.+|| ..++++...+. ..+. ..+. .+.|+|||+.|+. +..+| .|++||+.+++ ...+..
T Consensus 280 l~~~d~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~ 354 (719)
T 1z68_A 280 LSICDFREDWQTWDCPKTQEHIEESRT-GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS 354 (719)
T ss_dssp EEEEEECSSSSSEECCGGGEEEEECSS-SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC
T ss_pred EEEEcccCCCCCCceEEEEecccccCC-ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc
Confidence 88999 88887655442 2333 3455 7899999996543 44555 47777877665 344443
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=7.1e-13 Score=126.64 Aligned_cols=192 Identities=14% Similarity=0.169 Sum_probs=130.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCC-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++||.++.++ .|++||+.++ ....... ....+..++|+||+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg------------------~~~~~~~-~~~~~~~~~wspDg 182 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA------------------KELPDVL-ERVKFSCMAWTHDG 182 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT------------------EEEEEEE-EEECSCCEEECTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC------------------CCCcccc-cCcccceEEEEeCC
Confidence 4555789999999999998776543 8999999653 2222111 11236679999999
Q ss_pred CEEEEEeCCCc----------------EEEEEcCCCccccce--eeeccccceEEEEEecCCCEEEEEeC-----CCEEE
Q psy15157 192 PILASGSKDKT----------------VKMFDYSKSSVRKAH--KTIQESTFVRCLSFHPCGDYMVVGTD-----HFVLR 248 (344)
Q Consensus 192 ~~l~s~~~dg~----------------i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~i~ 248 (344)
+.|+.++.++. |++|++.++...... ....+...+..+.|+|+|++|+.++. +..+.
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~ 262 (710)
T 2xdw_A 183 KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLW 262 (710)
T ss_dssp SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEE
T ss_pred CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEE
Confidence 99988888766 999999886532122 11123445788999999999987754 34455
Q ss_pred EE-----------------------------cCCCCEEEEEeCC----CcEEEEeCCCCeE--EeeecccCCCccEEEEE
Q psy15157 249 LY-----------------------------SSDGRIYCSGSKD----GDIKIWDGVSSKC--VATFSKAHDGAEISSLT 293 (344)
Q Consensus 249 ~~-----------------------------~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~ 293 (344)
+| +++|..|+..+.+ +.|.+||+.++.. ...+..+.....+..+.
T Consensus 263 ~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (710)
T 2xdw_A 263 YCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVA 342 (710)
T ss_dssp EEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE
T ss_pred EEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEE
Confidence 44 3344555544443 3599999887641 23333233323588899
Q ss_pred EccCCCEEEEEeCCCc--EEEEEcCCCeeEEEeecC
Q psy15157 294 FTRNGKYLLSSGKDSL--VKLWELSSARCLIAYTGA 327 (344)
Q Consensus 294 ~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~ 327 (344)
|++++.++++...|+. |++||+.+|+.+..+..+
T Consensus 343 ~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 343 CVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred EEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence 9988888888888885 666788788877777765
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=1.8e-12 Score=109.06 Aligned_cols=172 Identities=15% Similarity=0.098 Sum_probs=136.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
.+++|++++.|+.|.+||.++ ++.+..+..+. ..+.++++.|+|++++ +.++.|..||.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t------------------G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~ 63 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT------------------KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR 63 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT------------------TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCC------------------CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC
Confidence 468999999999999999854 44555665555 4688999999999888 45788999998
Q ss_pred CCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEEE----------------------------cCCCCEEEE
Q psy15157 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLY----------------------------SSDGRIYCS 259 (344)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~----------------------------~~~~~~l~~ 259 (344)
+++....+... ....+.++.+.++|+++++.+. ++.+..+ .++|+++++
T Consensus 64 -~G~~~W~~~~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 64 -DGRELWNIAAP-AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp -TSCEEEEEECC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred -CCCEEEEEcCC-CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 77766555431 2345788899999999998876 6666554 356788888
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
...++.|..||.. |+.+..+... ..+.++...++|+++++++.++.|..+|..+|+.+.++...
T Consensus 142 ~~~~~~v~~~d~~-G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 142 LFATSEVREIAPN-GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp ETTTTEEEEECTT-SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred ecCCCEEEEECCC-CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 8899999999988 9988888643 23566788899999999998889999999999999998743
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=2.4e-13 Score=129.55 Aligned_cols=192 Identities=13% Similarity=0.089 Sum_probs=129.1
Q ss_pred cCCCceEEEEECCCCCEEE-----EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCA-----TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~-----sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++|| .|+.+..|++||+.++.... ...+... ....++|+|||
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~----------------~~~~~~~--~~~~~~wspDg 179 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK----------------VDVIEGG--KYATPKWTPDS 179 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS----------------SCCBSCC--TTCCCEECTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC----------------CcccCcc--cccceEEecCC
Confidence 5666899999999999998 45556789999997642210 0011111 12578999999
Q ss_pred CEEEEEeCCCc-------------EEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE--
Q psy15157 192 PILASGSKDKT-------------VKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY-- 250 (344)
Q Consensus 192 ~~l~s~~~dg~-------------i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~-- 250 (344)
+.|+.++.|.. |++|++.++.... ......+...+..+.|+|+|++|++++.++ .+.++
T Consensus 180 ~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 180 KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 99999888776 9999998875321 122222345688999999999998877554 44443
Q ss_pred -------------------cCCCCEEEEEe---CCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 251 -------------------SSDGRIYCSGS---KDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 -------------------~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
.++|.+++... .++.|.+||+.++.. ...+..++....+..++|+ ++.++++...
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 260 GEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp TCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 23555334333 257899999887652 1223223323468888998 7788889999
Q ss_pred CCcEEEEEcC-CCeeEEEeecC
Q psy15157 307 DSLVKLWELS-SARCLIAYTGA 327 (344)
Q Consensus 307 dg~i~vwd~~-~~~~~~~~~~~ 327 (344)
|+..+||.+. +++.+..+..+
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCS
T ss_pred CCEEEEEEEeCCCCeeEEecCC
Confidence 9998888665 46666666543
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.52 E-value=7.9e-12 Score=108.05 Aligned_cols=182 Identities=12% Similarity=0.103 Sum_probs=133.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---------cCCcCCeEEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---------YDHIEEVTCLEF 187 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~ 187 (344)
++-..+..++++++|+++++...++.|++||.+... ..+..+ .++......+++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-----------------~~~~~~~~~~~~g~~~~~~~~P~~ia~ 150 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-----------------GPLLILGRSMQPGSDQNHFCQPTDVAV 150 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-----------------CCSEEESBTTBCCCSTTCCSSEEEEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-----------------EEEEEecccCCCCCCccccCCCcEEEE
Confidence 445678999999999999999889999999985321 011122 245557899999
Q ss_pred cC-CCCEEEEEe-CCCcEEEEEcCCCccccceeeec--------cccceEEEEEecC-CCEEEEEeCCCEEEEEcCC-CC
Q psy15157 188 HP-SAPILASGS-KDKTVKMFDYSKSSVRKAHKTIQ--------ESTFVRCLSFHPC-GDYMVVGTDHFVLRLYSSD-GR 255 (344)
Q Consensus 188 ~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~--------~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~~~-~~ 255 (344)
+| ++.++++.+ .++.|++||. +++....+.... +-.....++++|+ +..+++...++.|++|+++ |+
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred eCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 99 788888886 6999999994 454443332211 1134789999998 6666677788899999887 65
Q ss_pred EEEEE------------------------------eCCCcEEEEeCCCCeEEeeecc--cCCCccEEEEEEccCCCEEEE
Q psy15157 256 IYCSG------------------------------SKDGDIKIWDGVSSKCVATFSK--AHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 256 ~l~~~------------------------------~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s 303 (344)
++.+- ..+..|++||..+++.+..+.. .+. ..+.+++++|+|.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~-~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF-DMPHDIVASEDGTVYIG 308 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCC-SSEEEEEECTTSEEEEE
T ss_pred EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCcc-CCeeEEEECCCCCEEEE
Confidence 54322 1233799999999998887741 222 35899999999988888
Q ss_pred EeCCCcEEEEEcCC
Q psy15157 304 SGKDSLVKLWELSS 317 (344)
Q Consensus 304 ~~~dg~i~vwd~~~ 317 (344)
...++.|++|++..
T Consensus 309 d~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 309 DAHTNTVWKFTLTE 322 (329)
T ss_dssp ESSSCCEEEEEEEE
T ss_pred ECCCCEEEEEeCCc
Confidence 88999999999854
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=1.3e-12 Score=115.44 Aligned_cols=191 Identities=11% Similarity=0.014 Sum_probs=123.1
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE--EcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE--FHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~ 192 (344)
..+|...+..++|+|||+.|+.++.++.|++||+.++ ........+...+.... +++++.
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g------------------~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL------------------EENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC------------------CEEEEEECCTTEEEEEEEEECTTSS
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC------------------cceeeeechhhcccccceeECCCCC
Confidence 3456556667899999999999999999999999642 22333344444444443 489998
Q ss_pred EEEEE----------------------eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCC----
Q psy15157 193 ILASG----------------------SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHF---- 245 (344)
Q Consensus 193 ~l~s~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~---- 245 (344)
.++.. ..+..|.+||+.+++.... ..+...+..++|+| +|+.|+.+...+
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (388)
T 3pe7_A 138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---LQENQWLGHPIYRPYDDSTVAFCHEGPHDLV 214 (388)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE---EEESSCEEEEEEETTEEEEEEEEECSCTTTS
T ss_pred eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe---ecCCccccccEECCCCCCEEEEEEecCCCCC
Confidence 87743 2447899999998754322 23455688999999 999887765421
Q ss_pred --EEEE------------------------EcCCCCEEEEEeC-CC----cEEEEeCCCCeEEeeecccCCCc---cEEE
Q psy15157 246 --VLRL------------------------YSSDGRIYCSGSK-DG----DIKIWDGVSSKCVATFSKAHDGA---EISS 291 (344)
Q Consensus 246 --~i~~------------------------~~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~---~v~~ 291 (344)
.+.+ |+|+|+.|+..+. ++ .|++||+.+++............ ....
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 294 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDG 294 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTS
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCC
Confidence 3333 4789987755443 22 39999999887433221111000 0112
Q ss_pred EEEccCCCEEEEE---------eCCCcEEEEEcCCCeeEEEeecC
Q psy15157 292 LTFTRNGKYLLSS---------GKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 292 i~~~~~~~~l~s~---------~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.|+|||+.|+.. ..+..|++||+.+++. ..+..+
T Consensus 295 ~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~ 338 (388)
T 3pe7_A 295 SLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARH 338 (388)
T ss_dssp SEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEEC
T ss_pred CeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccc
Confidence 3799999988754 4567899999998876 344444
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=2.2e-12 Score=122.14 Aligned_cols=192 Identities=13% Similarity=0.033 Sum_probs=126.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVD----------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLE 186 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~d----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~ 186 (344)
|...+.+++|||||+.|++++.| ..|++||+.+... ........+. .+...+..++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~ 194 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA-------------ADRSAVRELSDDAHRFVTGPR 194 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT-------------TCGGGSEESSCSCSSEECCCE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc-------------ccCCceeEEEecCCCcccCce
Confidence 67789999999999999998877 5899999864100 0001123344 4556778899
Q ss_pred EcCCCCEEEEEeCCC--------cEEEEEcC-CCccccceee-eccccceEEEEEecCCCEEEEEeCCC--EEEEEc---
Q psy15157 187 FHPSAPILASGSKDK--------TVKMFDYS-KSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVGTDHF--VLRLYS--- 251 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg--------~i~iwd~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~~~--- 251 (344)
|+|||+.|+.++.++ .|++||+. ++........ ..+...+..+.|+|+|++++++..++ .+..|+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence 999999998777553 79999998 4521111122 22356789999999999777777777 444441
Q ss_pred ----------------------------CCCCEEEEEeCCCcEEEE--eCCCCeEEeeecccCCCccEEEE-EEccCCCE
Q psy15157 252 ----------------------------SDGRIYCSGSKDGDIKIW--DGVSSKCVATFSKAHDGAEISSL-TFTRNGKY 300 (344)
Q Consensus 252 ----------------------------~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~i-~~~~~~~~ 300 (344)
++++++++++. +.++|| |..+++ +..+. .+. ..+..+ +++.+.-+
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~-~~~-~~~~~~~s~~~~~~~ 350 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA-GPW-TEWAATLTVSGTRAV 350 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC-SSC-CEEEEEEEEETTEEE
T ss_pred CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec-CCC-CeEEEEEecCCCEEE
Confidence 47888888888 999999 666665 45554 233 356666 44433323
Q ss_pred EEEEeCCC--cEEEEEcCCCeeEEEeec
Q psy15157 301 LLSSGKDS--LVKLWELSSARCLIAYTG 326 (344)
Q Consensus 301 l~s~~~dg--~i~vwd~~~~~~~~~~~~ 326 (344)
+++++.+. .|++||+.+++.......
T Consensus 351 ~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 351 GVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp EEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred EEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 34445554 466667777765443333
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=6.1e-12 Score=109.31 Aligned_cols=174 Identities=14% Similarity=0.107 Sum_probs=118.3
Q ss_pred CceEEEEECCCCCEEEEEeCC---Ce--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVD---AS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~d---g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+..++|||||++|+.++.+ +. |.+|++.+ ........ +.. +..++|+|+++.|
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~------------------g~~~~l~~-~~~-~~~~~wspdg~~l 118 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET------------------LSSKKILE-AKN-IRSLEWNEDSRKL 118 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT------------------TEEEEEEE-ESE-EEEEEECTTSSEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC------------------CceEEEEc-CCC-ccceeECCCCCEE
Confidence 468889999999999987754 34 66667643 22222222 233 8999999999988
Q ss_pred EEEeCC---------------------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC--
Q psy15157 195 ASGSKD---------------------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF-- 245 (344)
Q Consensus 195 ~s~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-- 245 (344)
+.++.+ ..|.+||+.+++....+.. . .+..+.|+|+| +++++..+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHRDK-IVVNVPHREII 193 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEETTE-EEEEEECCCSS
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCCCe-EEEEEeccccc
Confidence 877642 5799999988764222322 2 67889999999 777664431
Q ss_pred -------EEEE-----------------EcCCCCEEEEEeCC--------CcEEEEeCCCCeEEeeecccCCCccEEE-E
Q psy15157 246 -------VLRL-----------------YSSDGRIYCSGSKD--------GDIKIWDGVSSKCVATFSKAHDGAEISS-L 292 (344)
Q Consensus 246 -------~i~~-----------------~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~-i 292 (344)
.+.. ++|+|+.++.++.+ ..|.+|| +++...... .+. ..+.. +
T Consensus 194 ~~~~~~~~l~~~d~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~-~~~-~~~~~~~ 269 (347)
T 2gop_A 194 PQYFKFWDIYIWEDGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD-EVD-RGVGQAK 269 (347)
T ss_dssp CCSSCCEEEEEEETTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST-TCC-SEEEEEE
T ss_pred ccccccccEEEeCCCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc-cCC-cccCCcc
Confidence 2221 26788888777654 3688888 555443332 333 45776 8
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 293 TFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 293 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.|+ ++ ++++++.++.+++| +.+++....+.
T Consensus 270 ~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~ 299 (347)
T 2gop_A 270 IKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK 299 (347)
T ss_dssp EET-TE-EEEEEEETTEEEEE-EESSSEEEEEC
T ss_pred EEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec
Confidence 999 88 88999999999999 88666544443
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=6e-12 Score=119.20 Aligned_cols=194 Identities=10% Similarity=-0.000 Sum_probs=129.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEE--eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE--------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATG--SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT-------- 183 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-------- 183 (344)
.+.+|...+..++|++++-++++. +.++...||..... .....+..|...+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD------------------GAEESALPAPWNVRNRVFEYSG 79 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT------------------SCEEESSCTTCCBCCCGGGTCC
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC------------------CCcceeCCCCccccccccccCC
Confidence 356899999999999887777777 66889999986321 12334455554444
Q ss_pred -EEEEc--CCCCE-EEEEeC-CCcEEEEEcC--C-Cccccceeeec---cccceEEEEEecCCCEEEEEeCC--------
Q psy15157 184 -CLEFH--PSAPI-LASGSK-DKTVKMFDYS--K-SSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGTDH-------- 244 (344)
Q Consensus 184 -~~~~~--~~~~~-l~s~~~-dg~i~iwd~~--~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~-------- 244 (344)
...|+ ||++. |+.++. +..|.+|++. . +.. ..+.... +...+..++|+|+|+.|++++.+
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 55565 99987 665543 5667777765 2 332 2221111 45568899999999999877654
Q ss_pred --CEEEE-----------------------------EcCCCCEEEEEeCC--------CcEEEEeCC-CC--eEEeeecc
Q psy15157 245 --FVLRL-----------------------------YSSDGRIYCSGSKD--------GDIKIWDGV-SS--KCVATFSK 282 (344)
Q Consensus 245 --~~i~~-----------------------------~~~~~~~l~~~~~d--------g~i~iwd~~-~~--~~~~~~~~ 282 (344)
..|.+ |+|||++|+.++.+ ..|++||+. ++ .....+..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 23322 46788888877755 379999998 56 13333433
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCeeEEEeecC
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDS--LVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~ 327 (344)
.+. ..+..+.|+|||+++++++.++ .|++||+.+++......++
T Consensus 239 ~~~-~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 239 GPE-EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp ETT-BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred CCC-ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 333 4589999999999888888888 6777777677665444443
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.47 E-value=3.2e-13 Score=119.46 Aligned_cols=181 Identities=7% Similarity=0.002 Sum_probs=110.9
Q ss_pred CceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcCCCCEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHPSAPILA 195 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~ 195 (344)
..+.+++|||||++|+.+... ..|.+||+.++ .. ..+..+... ...+.|+|+++.|+
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~------------------~~-~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ------------------QA-VQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT------------------EE-EECCCSSCBCTTTCEECTTSSEEE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCC------------------cE-EEeecCCCCccccceECCCCCEEE
Confidence 347788999999998877543 36778887532 22 222222222 33478999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEE-------------------EEEecCCCEEEEE-----eCCCEEE---
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC-------------------LSFHPCGDYMVVG-----TDHFVLR--- 248 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~~~~i~--- 248 (344)
.++.++.|++||+.+++....... +...... +.|+|+++.++++ ..+..+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEE
T ss_pred EEEcCCcEEEEECCCCCcEEEEec--ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEE
Confidence 999999999999988754332221 1111111 2344444332221 1111222
Q ss_pred -------------------EEcC-CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEE
Q psy15157 249 -------------------LYSS-DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 249 -------------------~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 302 (344)
.|+| ++..++..+.+ ..|.+||...++...... ......+..+.|+|+|++|+
T Consensus 175 ~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 175 IETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp TTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEE
T ss_pred CCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEE
Confidence 3578 78766665543 368899987665433332 22123588899999999877
Q ss_pred EEeCC-----CcEEEEEcCCCeeEE
Q psy15157 303 SSGKD-----SLVKLWELSSARCLI 322 (344)
Q Consensus 303 s~~~d-----g~i~vwd~~~~~~~~ 322 (344)
.++.+ +.|++||+.+++...
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEE
T ss_pred EEecCCCCccceEEEEECCCCCeEE
Confidence 76543 449999999886544
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.44 E-value=6.3e-11 Score=99.02 Aligned_cols=177 Identities=8% Similarity=0.077 Sum_probs=125.5
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...+++++++|++++ +.+.++.|.+|+..+... ......+...+.+++++++++++++..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT------------------TVLPFNGLYQPQGLAVDGAGTVYVTDF- 85 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----------------------EECCCCSCCSCCCEEECTTCCEEEEET-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc------------------ceEeeCCcCCcceeEECCCCCEEEEcC-
Confidence 778999999999777 557789999998753210 111122334677899999998766665
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCE
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRI 256 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~ 256 (344)
++.|.+||....... ... ......+..++++++|+.+++...++.+..| +++|++
T Consensus 86 ~~~i~~~d~~~~~~~-~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VLP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNV 163 (270)
T ss_dssp TTEEEEECTTCSCCE-ECC-CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCE
T ss_pred CCEEEEEeCCCceEe-eee-cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCE
Confidence 889999998765322 111 1223568899999999877766667777776 567887
Q ss_pred EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 257 YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 257 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+++...++.|.+||........... ... ..+.+++++++|.++++...++.|.+||..+...
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~-~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPF-TDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCC-SSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred EEEECCCCEEEEEecCCCceEeecc-cCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 7777778899999988766543322 221 3589999999998777777789999999976543
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.43 E-value=1.4e-12 Score=115.24 Aligned_cols=178 Identities=10% Similarity=0.063 Sum_probs=117.1
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE------------------
Q psy15157 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC------------------ 184 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------------------ 184 (344)
..+.|+|||++|+.++.++.|++||+.++.. ......+......
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~------------------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 145 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEE------------------QVIYTVDEEWKGYGTWVANSDCTKLVGIEIL 145 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCE------------------EEEEECCTTEEEEEEEEECTTSSEEEEEEEE
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCc------------------EEEEecccccCCCCCEEEeccCCcccccccc
Confidence 3478999999999999999999999865321 1111112111111
Q ss_pred -EEEcCCCCEEEEE-----eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCC------EEE---
Q psy15157 185 -LEFHPSAPILASG-----SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHF------VLR--- 248 (344)
Q Consensus 185 -~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~------~i~--- 248 (344)
+.|+|+++.++.+ ..+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.+. .+.
T Consensus 146 ~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 146 KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 3567888766543 45678999999887643322 3455688899999 787776654321 222
Q ss_pred ---------------------EEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEE
Q psy15157 249 ---------------------LYSSDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYL 301 (344)
Q Consensus 249 ---------------------~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l 301 (344)
.|+|+|+.|+.++.+ +.|++||+.+++...... . .+ .. +.|+| +|+++
T Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~-~~--~~-~~~s~~dg~~l 297 (396)
T 3c5m_A 223 EDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-M-PP--CS-HLMSNFDGSLM 297 (396)
T ss_dssp TTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-C-CS--EE-EEEECSSSSEE
T ss_pred CCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-C-CC--CC-CCccCCCCceE
Confidence 247889877766544 449999998886543322 1 11 33 88999 99988
Q ss_pred EEEe----------------CCCcEEEEEcCCCeeEEEeecC
Q psy15157 302 LSSG----------------KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 302 ~s~~----------------~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++++ .++.|++||+.+++.. .+..+
T Consensus 298 ~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~ 338 (396)
T 3c5m_A 298 VGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKH 338 (396)
T ss_dssp EEEECCC----------CCCCCCEEEEEETTTTBCC-EEEEC
T ss_pred EEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCC
Confidence 8754 3478999999888753 34433
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=5.4e-10 Score=94.58 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=137.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..+...+.+++++++|+++++...++.|.+||.. +.. .......+...+.++++.+++.++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-----------------~~~~~~~~~~~~~~i~~~~~g~l~ 71 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-----------------TEYPLPTPDAKVMCLTISSDGEVW 71 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-----------------EEEECSSTTCCEEEEEECTTSCEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-----------------EEecCCcccCceeeEEECCCCCEE
Confidence 34556789999999999988877778899999875 110 111122345678999999999988
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------c
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------S 251 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~ 251 (344)
++...++.|..||.. ++. ..+........+..++++++|..+++...++.+..| +
T Consensus 72 v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 72 FTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp EEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEEC
T ss_pred EeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEc
Confidence 887778899999976 332 222222234568899999999877776666666655 4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
++|+++++...++.|..||. +++...... ......+.+++++++|++.++...++.|.+||. +++.. .+.......
T Consensus 150 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~ 225 (299)
T 2z2n_A 150 SDNALWFTENQNNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNA 225 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTC
T ss_pred CCCCEEEEeCCCCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCC
Confidence 56666766666788999998 665543211 122235889999999997777767889999999 66643 343332223
Q ss_pred ceeeeeeeccC
Q psy15157 332 QQFELTLTVDA 342 (344)
Q Consensus 332 ~~~~~~~~~~~ 342 (344)
....+.+..++
T Consensus 226 ~~~~i~~~~~g 236 (299)
T 2z2n_A 226 RPHAITAGAGI 236 (299)
T ss_dssp CEEEEEECSTT
T ss_pred CceeEEECCCC
Confidence 33444444443
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=4.2e-11 Score=100.10 Aligned_cols=179 Identities=9% Similarity=0.011 Sum_probs=127.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 196 (344)
+...+.+++++++|+++++.. ++.|.+||..... ...+. .....+.++++.+++.++++
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~-------------------~~~~~~~~~~~p~~i~~~~~g~l~v~ 124 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN-------------------QTVLPFDGLNYPEGLAVDTQGAVYVA 124 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC-------------------CEECCCCSCSSEEEEEECTTCCEEEE
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce-------------------EeeeecCCcCCCcceEECCCCCEEEE
Confidence 345788999999999777665 8899999975321 11111 22356889999999998888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|.+|+..+.... .........+.+++++++|+.+++...++.|..| +++
T Consensus 125 ~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 202 (270)
T 1rwi_B 125 DRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA 202 (270)
T ss_dssp EGGGTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT
T ss_pred ECCCCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCC
Confidence 778899999976544321 1111222356789999999866666666777776 567
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
|.++++...++.|.+||........... .+. ..+.+++++++|+++++...++.|+++++...+.
T Consensus 203 g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~~-~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 203 GTVYVTEHNTNQVVKLLAGSTTSTVLPF-TGL-NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCEEEEETTTSCEEEECTTCSCCEECCC-CSC-SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCEEEEECCCCcEEEEcCCCCcceeecc-CCC-CCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 7777777778899999987654433221 221 3589999999999888888999999999876554
No 184
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.39 E-value=3.4e-12 Score=122.52 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=107.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc---------CCeEEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI---------EEVTCL 185 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~ 185 (344)
+..|.+.+...+|||||+.||.++ |+.|++|++.++....... .......+.++. +....+
T Consensus 107 l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~---------~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 107 EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW---------TGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS---------CCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC---------CCCccceecCcccccccchhcCCCcce
Confidence 467788899999999999999884 7899999986532211000 000000111221 222458
Q ss_pred EEcCCCCEEEEEeCCC------------------------------------cEEEEEcCC---Cccccceeee------
Q psy15157 186 EFHPSAPILASGSKDK------------------------------------TVKMFDYSK---SSVRKAHKTI------ 220 (344)
Q Consensus 186 ~~~~~~~~l~s~~~dg------------------------------------~i~iwd~~~---~~~~~~~~~~------ 220 (344)
.|+|||+.|+.++.|. .|++||+.+ ++........
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999988876432 366677766 5211111111
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEeee---cccCCCccEE---
Q psy15157 221 QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK----CVATF---SKAHDGAEIS--- 290 (344)
Q Consensus 221 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~---~~~~~~~~v~--- 290 (344)
.+...+..++|+|+|+.++.... .++.+..|++||+.+++ +.... ...+. ..|.
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~---------------r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~-~~v~~~~ 320 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLR---------------RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTT-GWVGRFR 320 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEE---------------SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSS-SCSSSSS
T ss_pred CCCeEEEEEEEeCCCeEEEEEeC---------------CCCCEEEEEEEECCCCccccceeEEEEeeeccCC-ceEccCc
Confidence 14455777777777665443211 11233479999998886 32211 11222 2333
Q ss_pred --EEEEccCCCEEE-EEe-CCC--cEEEEEcCCCeeEE
Q psy15157 291 --SLTFTRNGKYLL-SSG-KDS--LVKLWELSSARCLI 322 (344)
Q Consensus 291 --~i~~~~~~~~l~-s~~-~dg--~i~vwd~~~~~~~~ 322 (344)
.+.|+|||+.|+ ..+ .+| .|++||+.+++...
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 678999999876 555 333 58889988766543
No 185
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=99.39 E-value=6.1e-13 Score=80.30 Aligned_cols=61 Identities=34% Similarity=0.647 Sum_probs=57.1
Q ss_pred ccccCCcHHHHHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhc
Q psy15157 4 QNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLA 65 (344)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~ 65 (344)
++|++.++..++.|++||+++++||.+||+.++|..|...+.+.+ |.|++||.+++..++.
T Consensus 3 ~~~~~~~~~~iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~-c~PSdrL~~iv~~gl~ 63 (66)
T 2xz2_A 3 RDEILDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQ 63 (66)
T ss_dssp GGCCCCTTCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC-CCCCCHHHHHHHHHHH
T ss_pred CccccCchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC-CCcHHHHHHHHHHHhh
Confidence 568889999999999999999999999999999999999999888 9999999999998764
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=3.1e-11 Score=105.49 Aligned_cols=177 Identities=10% Similarity=0.015 Sum_probs=120.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+++.+++++...++++|+.++ +++|++............ ........ .+.. |+.++| ++.+|+++ .+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~-------~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST-------PLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TR 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC-------CCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc-------cccceEEe-eCCC-eeEEEE--CCCEEEEE-cC
Confidence 689999999999999999885 666998654311110000 01111111 3555 999999 88899988 88
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
+.|++||+.+...... ...+...+.++.+.+. .+++++.||.|.+||+.++.... +
T Consensus 106 ~~l~v~dv~sl~~~~~--~~~~~~~v~~i~~~~p---------------------~~av~~~dG~L~v~dl~~~~~~~-~ 161 (388)
T 1xip_A 106 NALYSLDLEELSEFRT--VTSFEKPVFQLKNVNN---------------------TLVILNSVNDLSALDLRTKSTKQ-L 161 (388)
T ss_dssp SEEEEEESSSTTCEEE--EEECSSCEEEEEECSS---------------------EEEEEETTSEEEEEETTTCCEEE-E
T ss_pred CcEEEEEchhhhccCc--cceeecceeeEEecCC---------------------CEEEEECCCCEEEEEccCCcccc-c
Confidence 9999999987643222 2233445655554431 15578899999999999887653 2
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee--EEEeecC-------CCcCceeeeeeecc
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC--LIAYTGA-------GSMGQQFELTLTVD 341 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~ 341 (344)
. ..|++++|+|+| ++.|..||++++|+...++. ..++... ++....+++.+..+
T Consensus 162 ~-----~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 162 A-----QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp E-----ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred c-----CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 1 259999999999 67899999999999988876 6667321 12355666666544
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.37 E-value=5.4e-10 Score=93.92 Aligned_cols=200 Identities=13% Similarity=0.086 Sum_probs=145.0
Q ss_pred EecCC-CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCCC
Q psy15157 115 VTSHK-SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~-~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 192 (344)
+..+. ..+++++++|+|+++++ .++.|..||. + ++.+..+..+ ...+.++.+.++|+
T Consensus 31 ~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~------------------G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 31 YPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-D------------------GRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp EECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-T------------------SCEEEEEECCTTCEEEEEEECTTSC
T ss_pred eCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-C------------------CCEEEEEcCCCCccccccEECCCCC
Confidence 33444 47899999999999983 4778999987 3 3344455443 34688999999999
Q ss_pred EEEEEeC-CCcEEEEEcCCCccccceeeec----cccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 193 ILASGSK-DKTVKMFDYSKSSVRKAHKTIQ----ESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 193 ~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
.+++.+. ++.|..+|. +++....+.... +......+++.++|+++++...++.+..|
T Consensus 90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~ 168 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPF 168 (276)
T ss_dssp EEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCC
T ss_pred EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCcc
Confidence 9999887 788888885 555444443211 11234456788999999999888988887
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC----CCccEEEEEEccCCCEEEEEeCC--------CcEEEEE
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH----DGAEISSLTFTRNGKYLLSSGKD--------SLVKLWE 314 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~d--------g~i~vwd 314 (344)
.++|+++++++.++.|..+|..+++.+..+.... .-..+.++...++|+.+++.... +..++++
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~ 248 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVE 248 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEE
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEE
Confidence 4567788888888899999999999988875321 11347889999999988887421 2446777
Q ss_pred c-CCCeeEEEeecCCCcCceeee
Q psy15157 315 L-SSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~ 336 (344)
+ ++|+.+-+|......++...+
T Consensus 249 ~~~~g~~~W~~~~~~~~~~~~~~ 271 (276)
T 3no2_A 249 IDSEGKVVWQLNDKVKFGMISTI 271 (276)
T ss_dssp ECTTSBEEEEECCTTTSCCCCEE
T ss_pred ECCCCCEEEEecCcccccceeee
Confidence 7 689999999888776665554
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=4.6e-11 Score=104.37 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=104.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
...+.. |+.++| ++++|+++ .++.|++||+.+.. .......|...+.++.+.+.. +
T Consensus 84 ~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~------------------~~~~~~~~~~~v~~i~~~~p~--~ 139 (388)
T 1xip_A 84 EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS------------------EFRTVTSFEKPVFQLKNVNNT--L 139 (388)
T ss_dssp EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT------------------CEEEEEECSSCEEEEEECSSE--E
T ss_pred EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh------------------ccCccceeecceeeEEecCCC--E
Confidence 345777 999999 89999999 88999999997531 122344566778888877653 8
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++++.||.|.+||+.++.... ....|+|++|+|+| ++ .|..||.+++|+...+
T Consensus 140 av~~~dG~L~v~dl~~~~~~~------~~~~Vs~v~WSpkG--~~-------------------vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 140 VILNSVNDLSALDLRTKSTKQ------LAQNVTSFDVTNSQ--LA-------------------VLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEETTSEEEEEETTTCCEEE------EEESEEEEEECSSE--EE-------------------EEETTSCEEEEEEETT
T ss_pred EEEECCCCEEEEEccCCcccc------ccCCceEEEEcCCc--eE-------------------EEEcCCcEEEEcCCCc
Confidence 889999999999998765421 34579999999976 33 5778889999988777
Q ss_pred eE--Eeeecc--------cCCCccEEEEEEccCCCEEEEE
Q psy15157 275 KC--VATFSK--------AHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 275 ~~--~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+. ..++.. .+ ...|.+|.|.+++.++++-
T Consensus 193 ~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 193 EMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEE
T ss_pred cccccceecCCcccccccCC-CeeEEEEEEecCCeEEEEE
Confidence 65 444521 13 3579999999999998873
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.35 E-value=3e-09 Score=89.88 Aligned_cols=185 Identities=9% Similarity=0.051 Sum_probs=128.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.+...+.+++++++|+++++...++.|..||.... .....+......+.++++.+++.++++
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~ 115 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI------------------IKEYTLPNPDSAPYGITEGPNGDIWFT 115 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC------------------EEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc------------------EEEEeCCCcCCCceeeEECCCCCEEEE
Confidence 34578999999999998888777889999987411 011112234557899999999988888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|.+||. +++.. .+........+..++++++|..+++...++.+..| +++
T Consensus 116 ~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 116 EMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT
T ss_pred ecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC
Confidence 777899999998 54432 22222234568899999999877766555666554 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|.++++...++.|.+||. +++... +........+.+++++++|++.++...++.|..||. +++ +..+.
T Consensus 194 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~ 261 (299)
T 2z2n_A 194 DALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYP 261 (299)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEE
T ss_pred CCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEe
Confidence 776666666788999998 665433 221212245899999999997776667889999998 454 34443
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=1.4e-10 Score=111.24 Aligned_cols=188 Identities=14% Similarity=0.047 Sum_probs=121.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++||.++.+ ..|++||+.++. .+.. ..+...+..++|+||
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~------------------~~~~-~~~~~~~~~~~wspD- 219 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK------------------PLAD-ELKWVKFSGLAWLGN- 219 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC------------------EEEE-EEEEEESCCCEESTT-
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC------------------CCCc-cCCCceeccEEEECC-
Confidence 444578899999999999887654 359999997532 1111 111122357899999
Q ss_pred CEEEEEeCCCc--------------EEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCC-----EEEEE
Q psy15157 192 PILASGSKDKT--------------VKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHF-----VLRLY 250 (344)
Q Consensus 192 ~~l~s~~~dg~--------------i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~~ 250 (344)
+.|+.++.|+. |++|++.++......... .+...+..+.|+|+|++|+..+.++ .+.+|
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~ 299 (741)
T 1yr2_A 220 DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVA 299 (741)
T ss_dssp SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEE
T ss_pred CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEE
Confidence 88887776654 899998776532222211 1223578899999999988776433 45444
Q ss_pred ------------------------cCCCCEEEEEeCC----CcEEEEeCCCC-eEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 ------------------------SSDGRIYCSGSKD----GDIKIWDGVSS-KCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 ------------------------~~~~~~l~~~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+++|..|+..+.+ +.|.+||+.++ .....+...+. ..+..+.|+ ++.++
T Consensus 300 d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~l~~~~~~-~~~lv 377 (741)
T 1yr2_A 300 RVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK-DNLESVGIA-GNRLF 377 (741)
T ss_dssp EEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS-SEEEEEEEE-BTEEE
T ss_pred ECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC-CeEEEEEEE-CCEEE
Confidence 3456666666553 45999998874 23333332333 357788887 66778
Q ss_pred EEEeCCCcEEEEEcC-CCeeEEEeec
Q psy15157 302 LSSGKDSLVKLWELS-SARCLIAYTG 326 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~-~~~~~~~~~~ 326 (344)
++...|+..+||.+. +++.+..+..
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp EEEEETTEEEEEEEETTSCEEEECBC
T ss_pred EEEEECCEEEEEEEeCCCCceeeccC
Confidence 888889987777654 4666666654
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.35 E-value=3.4e-10 Score=97.69 Aligned_cols=177 Identities=10% Similarity=0.037 Sum_probs=125.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....+.+. +++++++...++.|.+||..+ .+.+.++. .......+++++++.++++...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t------------------~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~ 103 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINT------------------FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIW 103 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTT------------------CCEEEEEE-CCSSEEEEEEEETTEEEEEEBS
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcc------------------cEEEEEcC-CCCCCcEEEEeCCCeEEEEECC
Confidence 346777774 456666677789999999864 33444443 3456889999888865555558
Q ss_pred CCcEEEEEcCCCccccceeeec---cccceEEEEEecCCCEEEEEe--CCCEEEEE----------------------cC
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGT--DHFVLRLY----------------------SS 252 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~----------------------~~ 252 (344)
++.|.+||..+++....+.... .......+++ ++..++++. .++.|.++ ++
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~ 181 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDK 181 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECT
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcC
Confidence 9999999999876554443221 0013445666 455666555 37777776 67
Q ss_pred CCCEEEEEeCC----------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 253 DGRIYCSGSKD----------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 253 ~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|++++++..+ +.|.+||..+++....+.... +.....++|+|++++|+++.. .|.+||+.+++..
T Consensus 182 dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 182 YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 88887777655 789999999998876665221 235789999999999988765 8999999988764
No 192
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.35 E-value=2.6e-10 Score=99.75 Aligned_cols=181 Identities=9% Similarity=0.140 Sum_probs=120.4
Q ss_pred CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEc
Q psy15157 139 VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDY 208 (344)
Q Consensus 139 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~ 208 (344)
.|+.|.+||..+ .+.+..+..+..+ .++|+|+++++++++ .++.|.+||.
T Consensus 29 ~d~~v~v~D~~t------------------~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 29 TESRVHVYDYTN------------------GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGCEEEEEETTT------------------CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred ccCeEEEEECCC------------------CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 478999999854 3344555555554 899999999888876 3678999999
Q ss_pred CCCccccceeeec----cccceEEEEEecCCCEEEEEeC--CCEEEEEcCC-----------------------CCEEEE
Q psy15157 209 SKSSVRKAHKTIQ----ESTFVRCLSFHPCGDYMVVGTD--HFVLRLYSSD-----------------------GRIYCS 259 (344)
Q Consensus 209 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~-----------------------~~~l~~ 259 (344)
.+.+....+.... +......++++|+|++++++.. ++.+.+|+.. ...+++
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEE
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEE
Confidence 8876655444321 1234566899999999999874 5778777432 145566
Q ss_pred EeCCCcEEEEeCCC-CeEEe------eec------------------------------ccCCC----------------
Q psy15157 260 GSKDGDIKIWDGVS-SKCVA------TFS------------------------------KAHDG---------------- 286 (344)
Q Consensus 260 ~~~dg~i~iwd~~~-~~~~~------~~~------------------------------~~~~~---------------- 286 (344)
.+.||.+.+|+... ++... .+. .....
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 77788888887654 33220 000 00000
Q ss_pred -----ccEEEEEEccCCCEEEEEeC-----------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 287 -----AEISSLTFTRNGKYLLSSGK-----------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 287 -----~~v~~i~~~~~~~~l~s~~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.....++|+|+++.++++.. .+.|.+||+.+++.+.++..+. ...+.+++|++
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~ 317 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRN 317 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTT
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCC
Confidence 00011688999888877643 3479999999999999998876 45566666653
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=9.4e-10 Score=93.92 Aligned_cols=206 Identities=8% Similarity=0.061 Sum_probs=132.4
Q ss_pred ecCCCceEEEEECCCCCEEEE-------EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE--EecCCcCCeEEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCAT-------GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR--TLYDHIEEVTCLE 186 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~s-------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~ 186 (344)
...-....+++|+++|+++++ +..++.|.+||..++.... .. ...++...+.+++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------------~~~~~~~~~~~~~~~i~ 77 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------------ICKPEVNGYGGIPAGCQ 77 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE----------------EECCEETTEECCEEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------------EEecccCCCCCCCceEE
Confidence 344456789999999998888 6778999999975421110 00 0112456789999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEcCCCccccc-eeee--ccccceEEEEEecCCCEEEEEeCC---------------CEE
Q psy15157 187 FHPS-APILASGSKDKTVKMFDYSKSSVRKA-HKTI--QESTFVRCLSFHPCGDYMVVGTDH---------------FVL 247 (344)
Q Consensus 187 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~l~~~~~~---------------~~i 247 (344)
++++ +.++++. ..+.|.+||.. ++.... .... .....+.+++++++|+++++...+ +.+
T Consensus 78 ~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 78 CDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp ECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred EecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 9999 6655554 44579999987 554322 1111 112457889999999877766543 334
Q ss_pred EEE---------------------c----CCCCEEE-EEeCCCcEEEEeCC-CCeE-----EeeecccCCCccEEEEEEc
Q psy15157 248 RLY---------------------S----SDGRIYC-SGSKDGDIKIWDGV-SSKC-----VATFSKAHDGAEISSLTFT 295 (344)
Q Consensus 248 ~~~---------------------~----~~~~~l~-~~~~dg~i~iwd~~-~~~~-----~~~~~~~~~~~~v~~i~~~ 295 (344)
..| + ++++.++ +...++.|.+||.. +++. ...+. .+....+..++++
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d 234 (314)
T 1pjx_A 156 YCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFD 234 (314)
T ss_dssp EEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEB
T ss_pred EEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEEC
Confidence 333 5 7775544 44567889999976 4432 12222 1110357889999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 296 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
++|+++++...++.|.+||..+++.+..+..+.. ....+.+++++
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~~~i~~~~dg 279 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE--KPSNLHFKPQT 279 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS--CEEEEEECTTS
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC--CceeEEECCCC
Confidence 9999888887889999999988887777765532 33444444444
No 194
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.33 E-value=7.2e-11 Score=101.94 Aligned_cols=172 Identities=8% Similarity=0.058 Sum_probs=121.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.+++|++++..++..+.++.++.|.- .....+..+...+.+++|++++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 64 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---------------------EPWLEISKKGLQLEGLNFDRQGQLFLLDVF 64 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---------------------EEEEEEESSCCCEEEEEECTTSCEEEEETT
T ss_pred cccceeeecCCccceeEEeecccCccccc---------------------ceeEEEeccCccccCcEECCCCCEEEEECC
Confidence 35777888888877777778888998832 234556667777899999999998888889
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE-------------------------
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY------------------------- 250 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~------------------------- 250 (344)
++.|.+||..+++..... ......+.+++++++|+++++...+ +.+.+|
T Consensus 65 ~~~i~~~d~~~~~~~~~~--~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 65 EGNIFKINPETKEIKRPF--VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp TCEEEEECTTTCCEEEEE--ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CCEEEEEeCCCCcEEEEe--eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 999999999877543222 1345679999999999877776655 456555
Q ss_pred cCCCCEEEEEeC------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcCC
Q psy15157 251 SSDGRIYCSGSK------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELSS 317 (344)
Q Consensus 251 ~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~~ 317 (344)
+++|+++++... .+.|..||..+++...... .. ..+..++|+|+|++|+. .+.++.|++||+.+
T Consensus 143 d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NI--SVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CC--CcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 456666665443 2456666765554433222 11 24789999999986654 45678999999964
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.33 E-value=2.2e-09 Score=99.16 Aligned_cols=190 Identities=13% Similarity=0.090 Sum_probs=130.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc----CCCCEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH----PSAPILA 195 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~ 195 (344)
..+..+.|+|||+++++++.|+.|.+||+.. .+.+.+..+.... ....++|+ |+|++++
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~----------------~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWM----------------KEPTTVAEIKIGS-EARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTS----------------SSCCEEEEEECCS-EEEEEEECCSTTCTTTEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCC----------------CCCcEeEEEecCC-CCceeEEccccCCCCCEEE
Confidence 4577999999999999999999999999841 1133444554332 35789999 6999777
Q ss_pred EEeC-CCcEEEEEcCCCccccceeeec--------c-ccceEEEEEecCCCEEEEEe-CCCEEE----------------
Q psy15157 196 SGSK-DKTVKMFDYSKSSVRKAHKTIQ--------E-STFVRCLSFHPCGDYMVVGT-DHFVLR---------------- 248 (344)
Q Consensus 196 s~~~-dg~i~iwd~~~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~l~~~~-~~~~i~---------------- 248 (344)
+++. +++|.++|..+.+....+.... + ...+..+..++++..+++.. ..+.+.
T Consensus 260 v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 6655 5999999998877655544321 1 12566777787766554443 223332
Q ss_pred --------EEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeeecc----cCCCccEEEEEEccCCCEEE-EEe-CCCcEEEE
Q psy15157 249 --------LYSSDGRIYCSGS-KDGDIKIWDGVSSKCVATFSK----AHDGAEISSLTFTRNGKYLL-SSG-KDSLVKLW 313 (344)
Q Consensus 249 --------~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~-s~~-~dg~i~vw 313 (344)
.|+++|+++++++ .++.|.++|..+++.+..+.. .|.+..++ -++|++..++ ++. .++.|.++
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEE
T ss_pred ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCCcEEEeCCCCCCeEEEe
Confidence 3689999887665 578899999999988776653 23222232 2688755554 443 46899999
Q ss_pred EcCC-------CeeEEEeecCC
Q psy15157 314 ELSS-------ARCLIAYTGAG 328 (344)
Q Consensus 314 d~~~-------~~~~~~~~~~~ 328 (344)
|..+ .+.+.++...+
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~g 439 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPALG 439 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECSC
T ss_pred cCCCCCCccccCEEEEEEecCC
Confidence 9988 66788887653
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.29 E-value=2.2e-10 Score=98.84 Aligned_cols=185 Identities=10% Similarity=-0.018 Sum_probs=123.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-----CCeEEEEEcCCCC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-----EEVTCLEFHPSAP 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~ 192 (344)
....+..++++++++++++...++.|.+||..+.. ....+.... .....+++ .++.
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~------------------~~~~i~~g~~~~~~~~p~~i~~-~~~~ 142 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE------------------ITGYIECPDMDMESGSTEQMVQ-YGKY 142 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE------------------EEEEEECTTCCTTTCBCCCEEE-ETTE
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe------------------EEEEEEcCCccccCCCcceEEE-ECCE
Confidence 34678999999988666655589999999986532 222222111 13446666 3444
Q ss_pred EEEEEe-CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----------CEEEEE-----------
Q psy15157 193 ILASGS-KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----------FVLRLY----------- 250 (344)
Q Consensus 193 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~~----------- 250 (344)
++++.. .++.|.+||..+++....+.. ......+.++|+|++++++..+ +.+.++
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 444443 489999999998865544432 2335678889998876666543 566665
Q ss_pred -------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEE----eCCCcEEE
Q psy15157 251 -------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSS----GKDSLVKL 312 (344)
Q Consensus 251 -------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~----~~dg~i~v 312 (344)
+|+++.++++.. .|.+||..+++..........+.....++++| ++++.++. ..++.|.+
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred ecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 566777776654 89999998887542111111124588999999 56656665 57899999
Q ss_pred EEcCCCeeEEEeecC
Q psy15157 313 WELSSARCLIAYTGA 327 (344)
Q Consensus 313 wd~~~~~~~~~~~~~ 327 (344)
||.. |+.+.++.-.
T Consensus 298 ~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 298 YSPQ-GKLIDEFYVG 311 (328)
T ss_dssp ECTT-CCEEEEEEEE
T ss_pred ECCC-CCEEEEEEec
Confidence 9998 9999988753
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.28 E-value=1e-08 Score=86.60 Aligned_cols=182 Identities=12% Similarity=0.027 Sum_probs=126.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.....+.++++.++|++.++...++.|.+||.. +.. ....+..+...+.++++.+++.++++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-----------------~~~~~~~~~~~~~~i~~~~~g~l~v~ 78 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-----------------KEFEVPTPDAKVMCLIVSSLGDIWFT 78 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----------------EEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-----------------EEEECCCCCCcceeEEECCCCCEEEE
Confidence 345688999999999988887778999999875 111 01112233467889999999998887
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|..||.. ++. ..+........+.+++++++|.++++...++.+..+ +++
T Consensus 79 ~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 79 ENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT
T ss_pred ecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCC
Confidence 7778899999987 543 222222233568899999999877776556666554 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
|+++++...++.|..||. +++... +........+.+++++++|++.++....+.|.+||. +++..
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 776666656778888887 554433 221222245889999999987777767788999998 55443
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.26 E-value=4.8e-09 Score=92.00 Aligned_cols=71 Identities=7% Similarity=0.148 Sum_probs=56.6
Q ss_pred cCCCCEEEEEeC----------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCC
Q psy15157 251 SSDGRIYCSGSK----------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 251 ~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~-~dg~i~vwd~~~~ 318 (344)
+++++.++++.. ++.|.++|..+++.+..+.... ...++.|+|||+ .++++. .++.|.+||+.++
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 556666655443 3579999999999988886433 478999999999 777777 5899999999999
Q ss_pred eeEEEe
Q psy15157 319 RCLIAY 324 (344)
Q Consensus 319 ~~~~~~ 324 (344)
+.+..+
T Consensus 352 ~vv~~i 357 (373)
T 2mad_H 352 DQDQST 357 (373)
T ss_pred CEEeee
Confidence 999885
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.26 E-value=8.6e-10 Score=105.30 Aligned_cols=180 Identities=9% Similarity=0.004 Sum_probs=119.8
Q ss_pred eEEEEECCCCCEEEEEeCCCe----------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDAS----------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~----------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 185 (344)
+..++|+|||+.|+.++.++. |++|++.+.... ...+.....|...+..+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~--------------~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE--------------DILCAEFPDEPKWMGGA 238 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG--------------CEEEECCTTCTTCEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc--------------ceEEeccCCCCeEEEEE
Confidence 677999999999999888766 999998643110 01222223355668899
Q ss_pred EEcCCCCEEEEEeC-----CCcEEEEEcCC------CccccceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE
Q psy15157 186 EFHPSAPILASGSK-----DKTVKMFDYSK------SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY 250 (344)
Q Consensus 186 ~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~ 250 (344)
.|+|+|++|+.++. +..|++||+.+ +.. .......+...+.. .|+|+|+.|+..+..+ .+.+|
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 99999998877664 56899999976 421 11122223333333 4778888776655422 34443
Q ss_pred ---------------------------cCCCCEEEEEeCCCc--EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 ---------------------------SSDGRIYCSGSKDGD--IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 ---------------------------~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
++++.++++...|+. |.+||+.+++.+..+... ...+..+.++|+++.+
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE--VGSVVGYSGQKKDTEI 394 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC--SSEEEEEECCTTCSEE
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC--CceEEEEecCCCCCEE
Confidence 345666777777774 667787777766666533 3468899999998766
Q ss_pred EEE----eCCCcEEEEEcCCCe
Q psy15157 302 LSS----GKDSLVKLWELSSAR 319 (344)
Q Consensus 302 ~s~----~~dg~i~vwd~~~~~ 319 (344)
+.. ...+.|++||+.+++
T Consensus 395 ~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEeCCCCCCEEEEEECCCCc
Confidence 533 245789999999887
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=9.7e-09 Score=87.19 Aligned_cols=191 Identities=10% Similarity=0.059 Sum_probs=127.7
Q ss_pred ecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+..-..+..|+++ +.++++...++.|..||..+. . ...+ .....+.+++++++++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~------------------~-~~~~-~~~~~~~~i~~~~dG~l~ 68 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK------------------Q-VQRV-TMDAPVSSVALRQSGGYV 68 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC------------------C-EEEE-ECSSCEEEEEEBTTSSEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC------------------c-EEEE-eCCCceEEEEECCCCCEE
Confidence 344456678899985 556777777899999998642 1 1111 234678999999999955
Q ss_pred EEEeCCCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeC-----------CCEEEE------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-----------HFVLRL------------ 249 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----------~~~i~~------------ 249 (344)
++ . ++.|.+||..+++........ .....+..++++|+|++++.... .+.+..
T Consensus 69 v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~ 146 (297)
T 3g4e_A 69 AT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD 146 (297)
T ss_dssp EE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE
T ss_pred EE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee
Confidence 54 4 578999999876543222211 12345788999999996664421 122222
Q ss_pred ---------EcCCCCEE-EEEeCCCcEEEEeC--CCCeEE--eeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 250 ---------YSSDGRIY-CSGSKDGDIKIWDG--VSSKCV--ATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 250 ---------~~~~~~~l-~~~~~dg~i~iwd~--~~~~~~--~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
|+++++.+ ++.+.++.|.+||+ .++... ..+.. ......+..++++++|++.++....+.|.+||
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 37888755 45566788999986 455431 11111 11123578999999998888877788899999
Q ss_pred cCCCeeEEEeecCC
Q psy15157 315 LSSARCLIAYTGAG 328 (344)
Q Consensus 315 ~~~~~~~~~~~~~~ 328 (344)
..+|+.+..+..+.
T Consensus 227 ~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 227 PVTGKRLQTVKLPV 240 (297)
T ss_dssp TTTCCEEEEEECSS
T ss_pred CCCceEEEEEECCC
Confidence 99999998887664
No 201
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.25 E-value=2.3e-09 Score=90.94 Aligned_cols=181 Identities=13% Similarity=0.122 Sum_probs=119.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 192 (344)
.+..+...+.+++++++|+++++...++.|.+||..++.... ....... ....+.+++++|+|+
T Consensus 63 ~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~---------------~~~~~~~~~~~~~~~i~~d~~G~ 127 (296)
T 3e5z_A 63 PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES---------------IADSFEGKKLNSPNDVCLAPDGS 127 (296)
T ss_dssp EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE---------------EECEETTEECCCCCCEEECTTSC
T ss_pred EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE---------------EeeccCCCCCCCCCCEEECCCCC
Confidence 345677889999999999988888778899999985421110 0000111 123467899999999
Q ss_pred EEEEEeC-----------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----
Q psy15157 193 ILASGSK-----------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----- 250 (344)
Q Consensus 193 ~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----- 250 (344)
++++.+. .+.|..++.. ++.. ...........++|+|+|+.+++.+.++.+.+|
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~ 203 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS---APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNAR 203 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE---EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSS
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCC-CCEE---EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCC
Confidence 8887321 2455555544 3321 223344567889999999988666555666555
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEE-ccCCCEEEEEeCC
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF-TRNGKYLLSSGKD 307 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l~s~~~d 307 (344)
+++|+++++. ++.|.+||.. ++.+..+.. +. . +.+++| .|+++.|++++.+
T Consensus 204 g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~-~~-~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 204 GETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT-PQ-T-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC-SS-C-CCEEEEESTTSCEEEEEETT
T ss_pred CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC-CC-C-ceeEEEECCCCCEEEEEcCC
Confidence 3455555444 7889999986 766666653 32 3 788999 5899999988875
Q ss_pred CcEEEEEcCCCee
Q psy15157 308 SLVKLWELSSARC 320 (344)
Q Consensus 308 g~i~vwd~~~~~~ 320 (344)
.+..++..+.+.
T Consensus 278 -~l~~~~~~~~~~ 289 (296)
T 3e5z_A 278 -EFWSIETNVRGL 289 (296)
T ss_dssp -EEEEEECSCCBC
T ss_pred -eEEEEEcccccc
Confidence 455566665544
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.24 E-value=2.1e-08 Score=84.70 Aligned_cols=202 Identities=8% Similarity=-0.016 Sum_probs=131.7
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.+...+.++++.++|+++++...++.|..||.. +. .....+......+.++++.+++.++++
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-----------------~~~~~~~~~~~~~~~i~~~~~g~l~v~ 120 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-----------------FTEYPLPQPDSGPYGITEGLNGDIWFT 120 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-----------------EEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-----------------eEEecCCCCCCCCccceECCCCCEEEE
Confidence 344679999999999988887778889999875 11 011122223467889999999998888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|..||.. ++.. .+........+..++++++|+..++...++.+..+ +++
T Consensus 121 ~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 121 QLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp ETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT
T ss_pred ccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCC
Confidence 7778899999987 4432 22222234568899999999866555545666555 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
|.++++....+.|.+||. +++...... ......+.+++++++|++.++...++.|..||. +++. ..+.........
T Consensus 199 g~l~v~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~ 274 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEP 274 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCC
T ss_pred CCEEEEccCCCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcE-EEEECCccCCcc
Confidence 666666556677899987 444333211 112245889999999997777667789999998 4543 344332222233
Q ss_pred eeeeeeccC
Q psy15157 334 FELTLTVDA 342 (344)
Q Consensus 334 ~~~~~~~~~ 342 (344)
..+....++
T Consensus 275 ~~i~~~~~g 283 (300)
T 2qc5_A 275 HGITFGKDG 283 (300)
T ss_dssp CCEEECTTS
T ss_pred ceeEeCCCC
Confidence 444444443
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=3.8e-09 Score=97.49 Aligned_cols=175 Identities=11% Similarity=0.088 Sum_probs=121.2
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
+.+.++++...+++|.++|..+ .+.+.++.. ...+..+.|+|+++++++++.|+.|.+||+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t------------------~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGST------------------YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTT------------------CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred CCceEEEEeCCCCeEEEEECCC------------------CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEEC
Confidence 4456777888899999999864 344444432 235668999999999999999999999999
Q ss_pred C--CCccccceeeeccccceEEEEEe----cCCCEEEEEeC-CCEEEEEcCC----------------------------
Q psy15157 209 S--KSSVRKAHKTIQESTFVRCLSFH----PCGDYMVVGTD-HFVLRLYSSD---------------------------- 253 (344)
Q Consensus 209 ~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-~~~i~~~~~~---------------------------- 253 (344)
. +.+....+. .......++|+ |+|+++++++. .+.+.+++..
T Consensus 226 ~~~t~~~v~~i~---~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 226 WMKEPTTVAEIK---IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp TSSSCCEEEEEE---CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred CCCCCcEeEEEe---cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEE
Confidence 5 554433332 23446789999 69999988764 4677776311
Q ss_pred -------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeEEEee
Q psy15157 254 -------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 254 -------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~ 325 (344)
..+++....+|.|.++|....+........ .+.....+.|+|+|+++++++ .++.|.++|+.+++.+..+.
T Consensus 303 i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 303 ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 122333344577888887665322211111 123477889999999987765 67889999999999887775
Q ss_pred c
Q psy15157 326 G 326 (344)
Q Consensus 326 ~ 326 (344)
-
T Consensus 382 v 382 (567)
T 1qks_A 382 T 382 (567)
T ss_dssp C
T ss_pred c
Confidence 4
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.22 E-value=1.9e-09 Score=93.93 Aligned_cols=187 Identities=12% Similarity=0.036 Sum_probs=115.2
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-------cCCeEEEE
Q psy15157 124 AGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-------IEEVTCLE 186 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~ 186 (344)
.++++|||+++++++ .++.|.+||..+. +.+.++.-. ...-..++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~------------------~v~~~I~v~~g~r~~~g~~P~~~a 143 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL------------------LPTADIELPDAPRFLVGTYPWMTS 143 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC------------------CEEEEEEETTCCCCCBSCCGGGEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC------------------eEEEEEECCCccccccCCCCceEE
Confidence 399999999877765 3678999999653 333333211 12345689
Q ss_pred EcCCCCEEEEEeC--CCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEEeCC-CEE-----------
Q psy15157 187 FHPSAPILASGSK--DKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTDH-FVL----------- 247 (344)
Q Consensus 187 ~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~-~~i----------- 247 (344)
++|+|++++.+.. ++.|.++|+.+++....+..... ...-.-++.+++|+++++.... +.+
T Consensus 144 ~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 144 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 9999998887764 68999999999876555432110 0000012445555555554432 222
Q ss_pred --------------------------EEE-----------------------------------cCCCCEEEEEeC----
Q psy15157 248 --------------------------RLY-----------------------------------SSDGRIYCSGSK---- 262 (344)
Q Consensus 248 --------------------------~~~-----------------------------------~~~~~~l~~~~~---- 262 (344)
.+. +++++.++....
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred cccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 111 122233322211
Q ss_pred ------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEE-eCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 263 ------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSS-GKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 263 ------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
...|.++|+.+++.+..+... ..+.+|.+++|++ +|+++ ..++.|.++|..+++.+.+++..+.+.
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 123555555555555555432 2477999999997 66665 458999999999999999998776553
No 205
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.20 E-value=3.3e-09 Score=91.87 Aligned_cols=174 Identities=9% Similarity=0.092 Sum_probs=112.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCC---------------------------CeEEEEEcCCccccccCCCCCCcCCCCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVD---------------------------ASIKILDVDRMLAKSSMESSEPQNDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~d---------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (344)
.+.. +..++|+|||+.|+.++.+ ..|.+||+.++
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~------------------ 162 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE------------------ 162 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT------------------
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC------------------
Confidence 3344 9999999999988887643 46888887532
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC-------cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDK-------TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
..+..+.. . .+..++|+|++ ++++++.++ ...||.+.+++.. .+. .+ ..+..+ +|+|++|+.++
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~--~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMF--EK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEE--EE-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-Eec--cC-cceeeE--CCCCCEEEEEE
Confidence 22122332 3 67899999999 888876652 4455555444322 221 22 344443 89999887766
Q ss_pred CCC--------EEEE----------------------EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEE
Q psy15157 243 DHF--------VLRL----------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292 (344)
Q Consensus 243 ~~~--------~i~~----------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i 292 (344)
.+. .+.+ |+ ++ ++++++.++.+++| +.+++...... +. ..|.++
T Consensus 234 ~~~~~~~~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~--~~-~~v~~~ 307 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK--GR-HWIMGF 307 (347)
T ss_dssp CCSSSCCCSSCEEEEECSSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC--SS-SEEEEE
T ss_pred ccccCCccccceEEEECCCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec--CC-CeEEee
Confidence 332 3333 45 66 78888999999999 87665543332 23 469999
Q ss_pred EEccCCCEEEEEeCCCcE-EEEEcCCCeeEEEeecCC
Q psy15157 293 TFTRNGKYLLSSGKDSLV-KLWELSSARCLIAYTGAG 328 (344)
Q Consensus 293 ~~~~~~~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~ 328 (344)
+|+| .++++++.++.. .+|.+. ++ ...+..+.
T Consensus 308 ~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 308 DVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp EESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTT
T ss_pred eeeC--cEEEEEcCCCChHHheEeC-Cc-EEEecccc
Confidence 9999 677777777665 777776 54 44555543
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.17 E-value=1.9e-08 Score=89.35 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=119.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....++|+++++++++...++.|++||..+. ........ ..... ++|+++++.|+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g------------------~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN------------------KVTTVHPG-FKGGK-PAVTKDKQRVYSIGW 190 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT------------------EEEEEEET-CCBCB-CEECTTSSEEEEEBS
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC------------------EEEEeecc-CCCCc-eeEecCCCcEEEEec
Confidence 46889999999998888888899999998642 11222222 22233 899999998888887
Q ss_pred CC--cEEEEEcCCCcccccee-eec-cccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------
Q psy15157 200 DK--TVKMFDYSKSSVRKAHK-TIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------ 251 (344)
Q Consensus 200 dg--~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------ 251 (344)
++ .|.+||...+....... ... ....+.+++++|++..|+++..++.+..|+
T Consensus 191 ~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 191 EGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp STTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred CCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 66 78888876543311110 001 334567789999655666666666666552
Q ss_pred -----C-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-------------CCccEEEEEEccCCCEEEEEe-CCCcEE
Q psy15157 252 -----S-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-------------DGAEISSLTFTRNGKYLLSSG-KDSLVK 311 (344)
Q Consensus 252 -----~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~l~s~~-~dg~i~ 311 (344)
| ++.++++-..++.|+.|+.... +..+.... .-.....++++++|+++++-+ .++.|+
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 3 2344444455566777775533 12221111 012478999999999877777 889999
Q ss_pred EEEcCCCeeEEEeecC
Q psy15157 312 LWELSSARCLIAYTGA 327 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~ 327 (344)
.|++.+++. .++.++
T Consensus 349 ~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 349 KLDILDGYV-STVAGQ 363 (409)
T ss_dssp EEETTTTEE-EEEEEC
T ss_pred EEECCCCEE-EEEeCC
Confidence 999888864 455444
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=2.1e-09 Score=95.16 Aligned_cols=181 Identities=11% Similarity=0.049 Sum_probs=119.0
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-------CcCCeEEEE
Q psy15157 124 AGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-------HIEEVTCLE 186 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~ 186 (344)
.++++|||++++++. .++.|.++|..+. +.+.++.- .......++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~------------------~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF------------------LPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC------------------CEEEEEEETTCCCCCBSCCGGGSE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC------------------cEEEEEECCCccccccCCCcceEE
Confidence 899999999887775 3678999998653 23333211 012234678
Q ss_pred EcCCCCEEEEEeC--CCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEE------------------
Q psy15157 187 FHPSAPILASGSK--DKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVG------------------ 241 (344)
Q Consensus 187 ~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~------------------ 241 (344)
++|++++++.+.. ++.|.+.|+.+.+....+..... ...-.-+.++++|+.+++.
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 9999998888764 57899999988776544432110 0000113344444433332
Q ss_pred -------------------eCCCEEEE-----------------------------------EcCCCCEEEEEeC-----
Q psy15157 242 -------------------TDHFVLRL-----------------------------------YSSDGRIYCSGSK----- 262 (344)
Q Consensus 242 -------------------~~~~~i~~-----------------------------------~~~~~~~l~~~~~----- 262 (344)
+..+.+.+ ++++++.+++...
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 22222222 2344455544432
Q ss_pred -----CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCeeEEEee
Q psy15157 263 -----DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG-KDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 263 -----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~-~dg~i~vwd~~~~~~~~~~~ 325 (344)
++.|.++|..+.+.+..+.... ...++.|+|||+ ++++.. .++.|.++|+.+++.+.++.
T Consensus 344 thk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~ 410 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVD 410 (426)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred cccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEec
Confidence 3469999999999988886433 478999999999 888887 59999999999999999983
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.14 E-value=1.7e-09 Score=102.94 Aligned_cols=178 Identities=11% Similarity=-0.051 Sum_probs=114.8
Q ss_pred EEEEECCCCCEEEEEeCCCe-------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 123 RAGAFSIDGQLCATGSVDAS-------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~-------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..++|+|||+.|+.++.|.. |++|++.+.... ...+.....|...+..+.|+|
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~--------------~~lv~~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK--------------DTVVHERTGDPTTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG--------------CEEEECCCCCTTCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh--------------ceEEEecCCCCEEEEEEEECC
Confidence 67899999999999998876 999999653110 112333345666789999999
Q ss_pred CCCEEEEEeCCC----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC----CCEEEEEcC---------
Q psy15157 190 SAPILASGSKDK----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD----HFVLRLYSS--------- 252 (344)
Q Consensus 190 ~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~~i~~~~~--------- 252 (344)
+|++|+.++.++ .|.+||..++... ....+...+....+ ++|. +++.+. ++.|.+|+.
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~---~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFR---LLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCE---EEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceE---EeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 999887777665 6777765444322 12223333444455 4555 444433 355555521
Q ss_pred -----------------CCCEEEEEeCCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEEE----eCCCcE
Q psy15157 253 -----------------DGRIYCSGSKDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLSS----GKDSLV 310 (344)
Q Consensus 253 -----------------~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~----~~dg~i 310 (344)
++.++++...|+..++|.+. +++....+.... ...+..+.++|+++.|+.. ...+.|
T Consensus 312 ~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v 390 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQI 390 (695)
T ss_dssp EEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEE
T ss_pred EEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 34566777888887777554 355555554222 3467888899999877632 345789
Q ss_pred EEEEcCCCee
Q psy15157 311 KLWELSSARC 320 (344)
Q Consensus 311 ~vwd~~~~~~ 320 (344)
++||+.+++.
T Consensus 391 ~~~d~~~g~~ 400 (695)
T 2bkl_A 391 YKTSVSTGKS 400 (695)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 9999988763
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=7.3e-09 Score=98.56 Aligned_cols=183 Identities=14% Similarity=0.150 Sum_probs=114.3
Q ss_pred cCCCceEEEEECCCCCEEEE-----EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-EecCCcCCeEEEEEcCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCAT-----GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~s-----g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~ 190 (344)
+|...+..++|||||+++|- |+....|++||+.++ +.+. .+.. .....++|+ |
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg------------------~~~~~~~~~--~k~~~~~Ws-D 184 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK------------------QPLETPLKD--VKFSGISWL-G 184 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC------------------SEEEEEEEE--EESCCCEEE-T
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC------------------CCCccccCC--ceeccEEEe-C
Confidence 46668899999999998884 333457999999753 1111 1111 112467899 9
Q ss_pred CCEEEEEeCCCc-------------EEEEEcCCCccccc--eeeec-cccceEEEEEecCCCEEEEEeC----CCEEEEE
Q psy15157 191 APILASGSKDKT-------------VKMFDYSKSSVRKA--HKTIQ-ESTFVRCLSFHPCGDYMVVGTD----HFVLRLY 250 (344)
Q Consensus 191 ~~~l~s~~~dg~-------------i~iwd~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~----~~~i~~~ 250 (344)
++.|+.++.+.. |++|++.++..... +.... +......+.|+|+|++|+.... ...+.++
T Consensus 185 g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 264 (693)
T 3iuj_A 185 NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVK 264 (693)
T ss_dssp TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEE
T ss_pred CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEE
Confidence 998888887743 99999987643222 21111 2335678999999999876542 2355554
Q ss_pred -----------------------cCCCCEEE-EEeCC---CcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 -----------------------SSDGRIYC-SGSKD---GDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 -----------------------~~~~~~l~-~~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+++|..|+ ....+ +.|..+|+.++.. ...+..+ ... +. .|++++++|
T Consensus 265 d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~-~~--~~s~~g~~l 340 (693)
T 3iuj_A 265 DLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-RQQ-VL--TVHSGSGYL 340 (693)
T ss_dssp ETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSS-CE--EEEEETTEE
T ss_pred ECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-CCC-EE--EEEEECCEE
Confidence 33444443 33333 5788899887653 2233322 222 33 788899988
Q ss_pred EEEeC-CC--cEEEEEcCCCeeEEEee
Q psy15157 302 LSSGK-DS--LVKLWELSSARCLIAYT 325 (344)
Q Consensus 302 ~s~~~-dg--~i~vwd~~~~~~~~~~~ 325 (344)
+.... ++ .|++||+..+ ....+.
T Consensus 341 v~~~~~~g~~~l~~~d~~g~-~~~~l~ 366 (693)
T 3iuj_A 341 FAEYMVDATARVEQFDYEGK-RVREVA 366 (693)
T ss_dssp EEEEEETTEEEEEEECTTSC-EEEEEC
T ss_pred EEEEEECCeeEEEEEECCCC-eeEEee
Confidence 77654 43 6899998754 444443
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=1.9e-07 Score=80.38 Aligned_cols=183 Identities=10% Similarity=0.015 Sum_probs=120.6
Q ss_pred ceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...+..|+++ +.++++...++.|..||..++ . ...+. ....+.+++|+++++++++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~------------------~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~ 108 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG------------------R-KTVHA-LPFMGSALAKISDSKQLIAS-D 108 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT------------------E-EEEEE-CSSCEEEEEEEETTEEEEEE-T
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC------------------c-EEEEE-CCCcceEEEEeCCCeEEEEE-C
Confidence 4567889997 456667777899999998632 1 11121 23578999999999877654 4
Q ss_pred CCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeC--------------CCEEE------------EEc
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD--------------HFVLR------------LYS 251 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--------------~~~i~------------~~~ 251 (344)
+ .|.+||..+++........ .....+..++++|+|++++.... ++.+. .|+
T Consensus 109 ~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s 187 (326)
T 2ghs_A 109 D-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFS 187 (326)
T ss_dssp T-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEEC
T ss_pred C-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEc
Confidence 4 4999998877643221111 11245889999999986665432 12221 147
Q ss_pred CCCCEEEE-EeCCCcEEEEeCC--CC-eE-----EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 252 SDGRIYCS-GSKDGDIKIWDGV--SS-KC-----VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 252 ~~~~~l~~-~~~dg~i~iwd~~--~~-~~-----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++|+.++. .+.++.|.+||.. ++ .. ...+. .. ...+..++++++|++.++...++.|.+||. +++.+.
T Consensus 188 ~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 188 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-GI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-TS-SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC-CC-CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 88876544 4557889999985 55 31 22221 11 235788999999998777767788999998 677777
Q ss_pred EeecCC
Q psy15157 323 AYTGAG 328 (344)
Q Consensus 323 ~~~~~~ 328 (344)
.+..+.
T Consensus 265 ~i~~~~ 270 (326)
T 2ghs_A 265 RYEVPG 270 (326)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 776553
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.07 E-value=3.8e-08 Score=83.86 Aligned_cols=178 Identities=10% Similarity=0.075 Sum_probs=115.4
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCcccccc-CCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSS-MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++++++ |+++++.. ++.|.+||.. +..... ... . .......+.++++++++++++
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~-------~-------~~~~~~~~~~i~~d~~g~l~v 132 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKD-------S-------EGRRMQGCNDCAFDYEGNLWI 132 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBC-------T-------TSCBCBCCCEEEECTTSCEEE
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEecc-------C-------CCccccCCcCEEECCCCCEEE
Confidence 5567999999999 77555554 4478899875 221110 000 0 001224578999999998887
Q ss_pred EEeCC---------------CcEEEEEcCCCccccceeeeccccceEEEEEe----cCCCEEEEEe-CCCEEEEE-----
Q psy15157 196 SGSKD---------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH----PCGDYMVVGT-DHFVLRLY----- 250 (344)
Q Consensus 196 s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~-~~~~i~~~----- 250 (344)
+...+ +.|..||.. ++.... .........++++ |+++.++++. .++.+..|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~---~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 133 TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV---DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE---EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred EecCcccccccccccccCCCCeEEEECCC-CCEEEe---ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 77655 567777754 432211 1223346778899 9887665553 34444444
Q ss_pred -------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE-E
Q psy15157 251 -------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS-S 304 (344)
Q Consensus 251 -------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~ 304 (344)
+++|+++++...++.|.+||..+++.+..+... . ..+.+++|+++|++|+. .
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-~-~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-F-EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-S-SCEEEEEECTTSSEEEEEE
T ss_pred CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-C-CCceeEEECCCCCEEEEEe
Confidence 456777777777889999998877665555422 2 35899999999995554 4
Q ss_pred eCCCcEEEEEcCC
Q psy15157 305 GKDSLVKLWELSS 317 (344)
Q Consensus 305 ~~dg~i~vwd~~~ 317 (344)
..++.|..|++..
T Consensus 287 ~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 287 HENNAVWKFEWQR 299 (314)
T ss_dssp TTTTEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 5668899999864
No 212
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.04 E-value=6e-11 Score=104.13 Aligned_cols=173 Identities=13% Similarity=0.074 Sum_probs=100.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
++..+++++.||.|+.||..++.. +-.+.. +.+.+..+..++..+++++.||.|+.||..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~------------------~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI------------------KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE------------------EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE------------------EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 578899999999999999875432 223332 334444455677788888899999999998
Q ss_pred CCccccceeeeccccceE-EEEEecCCCEEEEEeCCCEEEEE-------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 210 KSSVRKAHKTIQESTFVR-CLSFHPCGDYMVVGTDHFVLRLY-------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~i~~~-------------------~~~~~~l~~~~~dg~i~iw 269 (344)
+++.......... ..+. +..+. .+..+++++.++.+..| +|++..+++++.|+.|+.|
T Consensus 68 tG~~~w~~~~~~~-~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 68 NNEGLTKLPFTIP-ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp --CCSEECSCCHH-HHHTTCSCC------CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECC
T ss_pred CCceeeeeeccCc-cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEE
Confidence 8765433221100 0000 00001 23455666666666665 3456788889999999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCC---CEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNG---KYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|.++++.+..+.... .....++.+. ..+++++.||.|+.||.++|+.+.++....
T Consensus 146 d~~tG~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 146 DTKTRELRWNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp CSSSSSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred ECCCCCEEEeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 999998765553211 1223334332 457778899999999999999988877443
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=1.9e-07 Score=79.08 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=108.9
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++++++|+++++. ++.|.+||.+++... .+.... .....+++++++|+|++++
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~----------------~~~~~~~~~~~~~~~di~~d~dG~l~~ 113 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV----------------VLATVDNDKKNNRFNDGKVDPAGRYFA 113 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE----------------EEEECCTTCSSEEEEEEEECTTSCEEE
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE----------------EEEecCCCCCCCCCCCEEECCCCCEEE
Confidence 45689999999999966554 567999998643211 111111 1234578999999999776
Q ss_pred EEeCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE---------------
Q psy15157 196 SGSKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY--------------- 250 (344)
Q Consensus 196 s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~--------------- 250 (344)
+...+ ..-.+|.+....... ...........++|+|+++.++++. .++.|..|
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~d~~g~~~--~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 114 GTMAEETAPAVLERHQGALYSLFPDHHVK--KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp EEEECCSBTTBCCTTCEEEEEECTTSCEE--EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred ecCCcccccccccCCCcEEEEEECCCCEE--EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 54322 234555554321111 1122334467899999999776543 34555444
Q ss_pred ---------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeC
Q psy15157 251 ---------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGK 306 (344)
Q Consensus 251 ---------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~ 306 (344)
+++|+++++...++.|..||..+++.+..+.... ..+++++|. |+++.|+.++.
T Consensus 192 ~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~--~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 192 YKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV--DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--SBEEEEEEESGGGCEEEEEEB
T ss_pred EECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--CCceEEEEeCCCCCEEEEEcC
Confidence 4677777777777889999999899888876432 358999998 88887766553
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=5.4e-08 Score=82.88 Aligned_cols=170 Identities=15% Similarity=0.198 Sum_probs=111.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 192 (344)
.+..+...+..++++++|+++++...++.|.+|+.+ +.... ......+ ....+.++++.++|.
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~---------------~~~~~~~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL---------------LVGRYAGKRLNSPNDLIVARDGA 143 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE---------------EECEETTEECSCCCCEEECTTSC
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE---------------EEeccCCCccCCCCCEEECCCCC
Confidence 345567789999999999977776667889999874 11000 0001111 123467899999999
Q ss_pred EEEE----EeC-------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------CEEEE
Q psy15157 193 ILAS----GSK-------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------FVLRL 249 (344)
Q Consensus 193 ~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~ 249 (344)
+++| |.. .+.|..||..+++..... .......++|+|+++.++++... +.|..
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEE
Confidence 8886 332 256777887666543221 23346789999999988887664 56665
Q ss_pred E--------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 250 Y--------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 250 ~--------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
| +++|+++ +++.+ .|.+||. .++.+..+.... .+.+++|.++++.|+.
T Consensus 220 ~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~~~~~~~---~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 220 FAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLGHIPTPG---TASNCTFDQAQQRLFI 293 (305)
T ss_dssp EEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEEEEECSS---CCCEEEECTTSCEEEE
T ss_pred EEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEEEEECCC---ceeEEEEeCCCCEEEE
Confidence 5 4556644 34444 4889997 566666665322 3788999999998888
Q ss_pred EeCCCc
Q psy15157 304 SGKDSL 309 (344)
Q Consensus 304 ~~~dg~ 309 (344)
++.++.
T Consensus 294 t~~~~l 299 (305)
T 3dr2_A 294 TGGPCL 299 (305)
T ss_dssp EETTEE
T ss_pred EcCCeE
Confidence 886543
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=1.3e-07 Score=80.47 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=122.2
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+..+........|+++|+ +++++..++.|..|+... . ...+..+...+..++++++|+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-------------------~-~~~~~~~~~~~~gl~~d~dG~ 98 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-------------------T-VDVLLDATAFTNGNAVDAQQR 98 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-------------------C-EEEEEESCSCEEEEEECTTSC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-------------------C-EEEEeCCCCccceeeECCCCC
Confidence 3445666788899999998 667777889999998731 1 233444566789999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEE----EeC-------------CCEEE-----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVV----GTD-------------HFVLR----- 248 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~----- 248 (344)
++++...++.|.+||.. ++......... ....+..++++++|+++++ |+. .+.|.
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 77665566889999975 44322111111 1123567888898887774 211 12222
Q ss_pred ----------------EEcCCCCEEEEEeCC------CcEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 249 ----------------LYSSDGRIYCSGSKD------GDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 249 ----------------~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.|+++++.++.+... +.|.+||+..+... ..+..... .....++++++|++ .++
T Consensus 178 ~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~pdgi~~d~~G~l-wv~ 255 (305)
T 3dr2_A 178 GSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD-GLPDGFCVDRGGWL-WSS 255 (305)
T ss_dssp SCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS-SCCCSEEECTTSCE-EEC
T ss_pred CCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC-CCCCeEEECCCCCE-EEe
Confidence 247788877666655 68999998754311 11111111 23567899999994 444
Q ss_pred eCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 305 GKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+.+| |.+|+. .++.+..+..+.
T Consensus 256 ~~~g-v~~~~~-~g~~~~~~~~~~ 277 (305)
T 3dr2_A 256 SGTG-VCVFDS-DGQLLGHIPTPG 277 (305)
T ss_dssp CSSE-EEEECT-TSCEEEEEECSS
T ss_pred cCCc-EEEECC-CCCEEEEEECCC
Confidence 4444 999998 677888877654
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.00 E-value=1.9e-08 Score=87.51 Aligned_cols=78 Identities=5% Similarity=0.013 Sum_probs=60.4
Q ss_pred EcCCCCEEEEEeC---------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE-EEEEe-CCCcEEEEEcCCC
Q psy15157 250 YSSDGRIYCSGSK---------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY-LLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 250 ~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~-~dg~i~vwd~~~~ 318 (344)
++++++.++.+.. ++.+.++|+.+.+.+..+..+. ....+.|+|||++ +++.. .++.|.++|+.++
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 5677777776533 2356699999999998886433 4789999999984 55666 5999999999999
Q ss_pred eeEEEeecCCCc
Q psy15157 319 RCLIAYTGAGSM 330 (344)
Q Consensus 319 ~~~~~~~~~~~~ 330 (344)
+.+.+++....+
T Consensus 348 kvv~~I~vg~~P 359 (368)
T 1mda_H 348 QDQSSVELDKGP 359 (368)
T ss_dssp EEEEECCCCSCC
T ss_pred cEEEEEECCCCC
Confidence 999999865443
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=1.4e-07 Score=81.75 Aligned_cols=178 Identities=10% Similarity=0.025 Sum_probs=118.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeC-----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------CCcCCeEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSV-----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------DHIEEVTCL 185 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~ 185 (344)
+|-..+..++|+++|+++++-.. ++.|.+||+.++. .+..+. .+...+..+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~------------------~~~~~~~~~~~~~~~~~~~~v 125 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ------------------LSRVIYLPPPITLSNSFVNDL 125 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE------------------EEEEEECCTTTSCTTCCCCEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe------------------EEEEEECChhhcccccccceE
Confidence 56678999999999987766543 5789999986532 122221 123456889
Q ss_pred EEcCCCC-EEEEEe---CCCcEEEEEcCCCccccceee-------------ec--------------cccceEEEEEecC
Q psy15157 186 EFHPSAP-ILASGS---KDKTVKMFDYSKSSVRKAHKT-------------IQ--------------ESTFVRCLSFHPC 234 (344)
Q Consensus 186 ~~~~~~~-~l~s~~---~dg~i~iwd~~~~~~~~~~~~-------------~~--------------~~~~v~~~~~~~~ 234 (344)
++++++. .+++-. .++.|.+||+.+++....... .+ ....+..++|+|+
T Consensus 126 ~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d 205 (343)
T 2qe8_A 126 AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE 205 (343)
T ss_dssp EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT
T ss_pred EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC
Confidence 9998654 556655 678999999987654322100 00 0123678999999
Q ss_pred CCEEEEEeCCC-EEE---------------------------------EEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 235 GDYMVVGTDHF-VLR---------------------------------LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 235 ~~~l~~~~~~~-~i~---------------------------------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
|+.++++...+ .+. .++++|.++++...++.|.+||..+++.....
T Consensus 206 g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLV 285 (343)
T ss_dssp SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEE
Confidence 99888876443 111 13678888988888999999998566643333
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
... ....+.+++|.++++++++.+..+.+.+|
T Consensus 286 ~~~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 286 TDE-KLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp ECG-GGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ECC-ceecCCeeEECCCCcEEEEeCcccccccc
Confidence 211 12358999999999988887765554433
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.93 E-value=6.2e-08 Score=92.92 Aligned_cols=186 Identities=9% Similarity=-0.005 Sum_probs=113.7
Q ss_pred eEEEEECCCCCEEEEEeCCCe--------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDAS--------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
+..++|+|| +.|+.++.|+. |++|++.+.... ...+.....+...+..+.|
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~--------------~~lv~~~~~~~~~~~~~~~ 275 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA--------------DQPVFATPELPKRGHGASV 275 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG--------------CEEEECCTTCTTCEEEEEE
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh--------------CEEEeccCCCCeEEEEEEE
Confidence 357899999 98888887654 888888542110 1122222334445889999
Q ss_pred cCCCCEEEEEeCCC-----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEEcC------
Q psy15157 188 HPSAPILASGSKDK-----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLYSS------ 252 (344)
Q Consensus 188 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~~~------ 252 (344)
+|+|++|+..+.++ .|++||+.++..........+....... ++|+|+.|+..+.. +.+.+|+.
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 354 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPR 354 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCE
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccc
Confidence 99999887776544 8999999876211011112222233333 34778877766542 23444422
Q ss_pred ------------------CCCEEEEEeCCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEE----EeCCCc
Q psy15157 253 ------------------DGRIYCSGSKDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLS----SGKDSL 309 (344)
Q Consensus 253 ------------------~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s----~~~dg~ 309 (344)
++.++++...|+..+||... +++....+.... ...+..+.++|+++.|+. ....+.
T Consensus 355 ~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 433 (741)
T 1yr2_A 355 FDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPAT 433 (741)
T ss_dssp EEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEE
T ss_pred cEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 33456677778876666543 455555554222 346889999999886652 234578
Q ss_pred EEEEEcCCCeeEEEee
Q psy15157 310 VKLWELSSARCLIAYT 325 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~ 325 (344)
|++||+.+++ ...++
T Consensus 434 i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 434 VLALDPATAK-TTPWE 448 (741)
T ss_dssp EEEEETTTTE-EEECS
T ss_pred EEEEECCCCc-EEEEe
Confidence 9999998887 33443
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.93 E-value=3.1e-07 Score=81.54 Aligned_cols=174 Identities=11% Similarity=0.063 Sum_probs=111.6
Q ss_pred EEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 125 GAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
++|+++++.|+++..++ .|.+|+...... ...+..+.. ....+.+++++|++..|+.+..++
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~---------------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~ 240 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA---------------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNK 240 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---------------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce---------------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCC
Confidence 89999999988888766 788888753110 001111112 446678899999544555577789
Q ss_pred cEEEEEcCCCcccccee---eeccccce-E-EEEEecCCCEEEE-EeCCCEEEEE-------------------------
Q psy15157 202 TVKMFDYSKSSVRKAHK---TIQESTFV-R-CLSFHPCGDYMVV-GTDHFVLRLY------------------------- 250 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~---~~~~~~~v-~-~~~~~~~~~~l~~-~~~~~~i~~~------------------------- 250 (344)
.|+.||..++... .+. .......- . .++|+|++..|++ ...++.|+.|
T Consensus 241 ~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~ 319 (409)
T 3hrp_A 241 NFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREE 319 (409)
T ss_dssp EEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGG
T ss_pred cEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccc
Confidence 9999999876432 110 11111111 2 8999996444444 4455566655
Q ss_pred -----------cCCCCEEEEEe-CCCcEEEEeCCCCeEEeeecccC-------------CCccEEEEEEccCCCEEEEEe
Q psy15157 251 -----------SSDGRIYCSGS-KDGDIKIWDGVSSKCVATFSKAH-------------DGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 251 -----------~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~l~s~~ 305 (344)
+++|+++++-+ .++.|+.||..++.... +.... .-.....++++++|.++++..
T Consensus 320 ~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~-~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST-VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp CBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE-EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred cEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE-EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 45667666666 77889999977776432 22110 013488999999988888888
Q ss_pred CCCcEEEEEc
Q psy15157 306 KDSLVKLWEL 315 (344)
Q Consensus 306 ~dg~i~vwd~ 315 (344)
.++.|+.+++
T Consensus 399 ~n~~Ir~i~~ 408 (409)
T 3hrp_A 399 WGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 8888988875
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.90 E-value=1.6e-06 Score=75.95 Aligned_cols=191 Identities=9% Similarity=-0.006 Sum_probs=118.7
Q ss_pred CCCCCEEEEEeC--CC---eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----
Q psy15157 128 SIDGQLCATGSV--DA---SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS---- 198 (344)
Q Consensus 128 s~~~~~l~sg~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---- 198 (344)
.|+++++.+... .. +|.+||..+ .+.+.++..-..+ .++++|+++.++.+.
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t------------------~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGS------------------GSILGHVNGGFLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCC------------------CeEEEEecCCCCC--CeEECCCCCEEEEEecccc
Confidence 356665555542 22 789999864 2334444433333 899999999888775
Q ss_pred ------CCCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEEEcCCCC-E--------
Q psy15157 199 ------KDKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRLYSSDGR-I-------- 256 (344)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~~~-~-------- 256 (344)
.++.|.+||..+.+....+..... ......+.|+|+|++++++.. ++.|.+++ ... .
T Consensus 89 ~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred ccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 367899999988765544432200 123457899999999999874 46677766 332 2
Q ss_pred ------------EEEEeCCCcEEEEeCCCCeEEeeec------------------c-c------------------CC--
Q psy15157 257 ------------YCSGSKDGDIKIWDGVSSKCVATFS------------------K-A------------------HD-- 285 (344)
Q Consensus 257 ------------l~~~~~dg~i~iwd~~~~~~~~~~~------------------~-~------------------~~-- 285 (344)
+++.+.||.+.++|. +++...... . . ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~ 246 (373)
T 2mad_H 168 TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA 246 (373)
T ss_pred ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc
Confidence 233346777777777 554431100 0 0 00
Q ss_pred -------------------CccEEEEEEccCCCEEEEEeC----------CCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 286 -------------------GAEISSLTFTRNGKYLLSSGK----------DSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 286 -------------------~~~v~~i~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
......+.++|+++.+++... ++.|.++|+.+++.+.++...+ ....+
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i 323 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAI 323 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeE
Confidence 001222678888888877653 3579999999999999996543 23555
Q ss_pred eeeccCC
Q psy15157 337 TLTVDAD 343 (344)
Q Consensus 337 ~~~~~~~ 343 (344)
.+++|++
T Consensus 324 ~~s~Dg~ 330 (373)
T 2mad_H 324 SVAQDGG 330 (373)
T ss_pred EECCCCC
Confidence 5566553
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.84 E-value=1.4e-07 Score=82.06 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=113.2
Q ss_pred CCCCCEEEEEeC-----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----
Q psy15157 128 SIDGQLCATGSV-----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS---- 198 (344)
Q Consensus 128 s~~~~~l~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---- 198 (344)
.|+++.++.... ++.|.+.|..+ .+.+.++..-..+ .++++|+++.++.++
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t------------------~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA------------------GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT------------------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC------------------CeEEEEEECCCCC--cEEECCCCCEEEEEccccc
Confidence 467776666654 67899999864 4445555433344 499999999776665
Q ss_pred ------CCCcEEEEEcCCCccccceeeec-----cccceEEEEEecCCCEEEEEeC--CCEEEEEc--------------
Q psy15157 199 ------KDKTVKMFDYSKSSVRKAHKTIQ-----ESTFVRCLSFHPCGDYMVVGTD--HFVLRLYS-------------- 251 (344)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~-------------- 251 (344)
.++.|.+||..+.+....+.... .......+.++|+|++++++.. ++.+.+++
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 36789999999987665554321 0123456899999999999874 57787762
Q ss_pred ------CCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccC--CCccE-EEEEEc-cCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 252 ------SDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAH--DGAEI-SSLTFT-RNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 ------~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~--~~~~v-~~i~~~-~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
...+.+++.+.||.+.+.++.+ ++......... ...++ ....|. ++|++++ .+.+|.|++.|+.++.
T Consensus 181 ~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 181 CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 2345566888999999999976 55432211110 01112 224564 6887666 4558999999997664
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=1e-06 Score=77.53 Aligned_cols=181 Identities=10% Similarity=0.028 Sum_probs=111.5
Q ss_pred ceEEEEECCCCCEEEEEeCC------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC---cCCeEEEEEcCCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVD------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH---IEEVTCLEFHPSA 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~ 191 (344)
....+..+|+| +++++..+ |.|.+.|..+. +.+.++..- ..--..+.|+|++
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~------------------~v~~~~~~~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF------------------EPLGKWEIDRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC------------------CEEEECCSBCTTCCCCCCEEEETTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC------------------eEEEEEccCCCCccccceEEECCCC
Confidence 45677888999 77776665 78999998653 333333311 1223468889999
Q ss_pred CEEEEEe-------------------CCCcEEEEEcCCCccccceeeeccccceEEEEE--ecCCCEEEEEe------CC
Q psy15157 192 PILASGS-------------------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF--HPCGDYMVVGT------DH 244 (344)
Q Consensus 192 ~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~------~~ 244 (344)
+.+++.. .+.+|.+||+.+++....+...........+.| +|+++++++++ .+
T Consensus 200 ~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls 279 (462)
T 2ece_A 200 EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS 279 (462)
T ss_dssp TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC
T ss_pred CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC
Confidence 9888874 378999999998765555443212234555656 99999888765 34
Q ss_pred CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeec---ccC--CCccEEEEEEccCCCEEEEEeC-CCcEEEEEcCC-
Q psy15157 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS---KAH--DGAEISSLTFTRNGKYLLSSGK-DSLVKLWELSS- 317 (344)
Q Consensus 245 ~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~--~~~~v~~i~~~~~~~~l~s~~~-dg~i~vwd~~~- 317 (344)
+.|.+|..++..+ ..+.+.|+.+.+....+. ... .+.....|.+++||++|+++.. .+.|.+||+..
T Consensus 280 s~V~v~~~d~g~~------~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 280 SSIWLWFYEDGKW------NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EEEEEEEEETTEE------EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred ceEEEEEecCCce------eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 4555554332111 123344444332221111 000 0124678999999999988764 68899999863
Q ss_pred --CeeEEEeec
Q psy15157 318 --ARCLIAYTG 326 (344)
Q Consensus 318 --~~~~~~~~~ 326 (344)
.+.+..+.-
T Consensus 354 ~~~~lv~~I~t 364 (462)
T 2ece_A 354 FKPVLTGKVKL 364 (462)
T ss_dssp TSCEEEEEEEC
T ss_pred CCcEEEEEEEe
Confidence 355555544
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.76 E-value=7.4e-07 Score=77.16 Aligned_cols=168 Identities=7% Similarity=0.044 Sum_probs=98.9
Q ss_pred CceEEEEECCCCCEEEEEe--CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGS--VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
..+..++++++|+++++.. .++.++||.+.++... .+.... .....|...+.+++++++++++++-
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~-----------~~~~~~~~~p~gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS-----------GNAIITFDTVLGIKSDGNGIVWMLD 84 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC-----------SSCCCCCSCEEEEEECSSSEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc-----------cCcccceeEeeEEEEcCCCcEEEEc
Confidence 6899999999999999864 2343666666422111 000000 0122466789999999998866655
Q ss_pred eC-----CCcEEEEEcCCCccccceeee----ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 198 SK-----DKTVKMFDYSKSSVRKAHKTI----QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 198 ~~-----dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
.. ++.|.+||+.+++....+... .+...+..+++++++..++++... ...++.|.+
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~---------------~~~~~~i~v 149 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA---------------PDDKAALIR 149 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC---------------SGGGCEEEE
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCc---------------cCCCCeEEE
Confidence 43 578999999887654444321 112346778888765555443210 003445555
Q ss_pred EeCCCCeEEeeeccc---------------------C------CCccEEEEEEccCCCEEEEEeCCC-cEEEEE
Q psy15157 269 WDGVSSKCVATFSKA---------------------H------DGAEISSLTFTRNGKYLLSSGKDS-LVKLWE 314 (344)
Q Consensus 269 wd~~~~~~~~~~~~~---------------------~------~~~~v~~i~~~~~~~~l~s~~~dg-~i~vwd 314 (344)
||..+++....+..+ . -...++.|+|+|+|+.|+.+..++ .|+.++
T Consensus 150 ~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 150 VDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 555544433322110 0 001368899999999998887666 454444
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.73 E-value=7.6e-06 Score=70.22 Aligned_cols=163 Identities=15% Similarity=0.129 Sum_probs=100.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++|+++|+++++. .+ .|.+||..++... .+.... .....+.+++++|+|++++
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~----------------~~~~~~~~~~~~~~~~i~~d~~G~l~v 149 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT----------------LHAELESDLPGNRSNDGRMHPSGALWI 149 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE----------------EEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE----------------EEeeCCCCCCCCCCCCEEECCCCCEEE
Confidence 34679999999999877765 44 4999998643211 111111 1124588999999999776
Q ss_pred EEeC------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEc-----------------
Q psy15157 196 SGSK------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYS----------------- 251 (344)
Q Consensus 196 s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~----------------- 251 (344)
+... .+.|..+| +++... + .........++|+|+|+.++++. .++.|.+|+
T Consensus 150 ~~~~~~~~~~~~~l~~~~--~g~~~~-~--~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA--KGKVTK-L--FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp EEEETTCCTTCEEEEEEE--TTEEEE-E--EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred EeCCCcCCCCceEEEEEe--CCcEEE-e--eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE
Confidence 5542 24455555 443221 1 12223467899999998776553 344454443
Q ss_pred --------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeC
Q psy15157 252 --------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGK 306 (344)
Q Consensus 252 --------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~ 306 (344)
++|.++++...++.|.+||. +++.+..+... . ..+.+++|+ ++++.|+.++.
T Consensus 225 ~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~-~-~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP-G-KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS-C-SBEEEEEEESTTSCEEEEEEB
T ss_pred CCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC-C-CCcEEEEEecCCCCEEEEEec
Confidence 34444444445678999987 56666666432 2 358999998 88887765543
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.68 E-value=5.1e-05 Score=62.87 Aligned_cols=184 Identities=7% Similarity=-0.046 Sum_probs=114.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
..+..++|+++++ ++++-..++.|..++.+.. ...............+++++++. ++++-
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~------------------~~~~~~~~~~~~p~~ia~d~~~~~lyv~d 97 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG------------------EPTTIIRQDLGSPEGIALDHLGRTIFWTD 97 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC------------------CCEEEECTTCCCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC------------------CcEEEEECCCCCccEEEEEecCCeEEEEE
Confidence 4678999998655 4445555789999998632 11112222234678999999755 55555
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC---CCEEEEE-----------------------c
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD---HFVLRLY-----------------------S 251 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~i~~~-----------------------~ 251 (344)
...+.|.++++..... ..+. .........++++|++..++++.. .+.|..+ +
T Consensus 98 ~~~~~I~~~~~~g~~~-~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 98 SQLDRIEVAKMDGTQR-RVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp TTTTEEEEEETTSCSC-EEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEE
T ss_pred CCCCEEEEEEcCCCCE-EEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEc
Confidence 6678999999865322 1111 112245688999997777666653 2455543 5
Q ss_pred CCCCE-EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 252 SDGRI-YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 252 ~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++.. +++-...+.|.++|.........+. .. .....++.. ++..+++....+.|.++|..+++.+..+...
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~--~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GL--QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CC--CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred CCCCEEEEEECCCCEEEEEecCCCceEEEec-CC--CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 55444 4444556788899887554333332 11 234677765 3444444446689999999999999888643
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.65 E-value=1.1e-05 Score=66.42 Aligned_cols=168 Identities=10% Similarity=0.002 Sum_probs=108.3
Q ss_pred cCCC--ceEEEEECCCCCEEEEEeC--CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCC
Q psy15157 117 SHKS--PCRAGAFSIDGQLCATGSV--DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~--~v~~~~~s~~~~~l~sg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~ 191 (344)
.|.. ....++|++++.++++.+. ++.|+++|+.++ +.+..+.- .......+++.. +
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg------------------~v~~~i~l~~~~fgeGi~~~g-~ 76 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG------------------KVENIHKMDDSYFGEGLTLLN-E 76 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC------------------CEEEEEECCTTCCEEEEEEET-T
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC------------------CEEEEEecCCCcceEEEEEeC-C
Confidence 4543 3689999998766666553 579999999754 33333321 111223455552 3
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.++++.-.++.+.++|..+.+....+... .... ..++++|+.++ ++..++.|.++|.
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g---~glt~Dg~~l~-------------------vs~gs~~l~viD~ 133 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDG---WGLATDGKILY-------------------GSDGTSILYEIDP 133 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECC-SSSC---CEEEECSSSEE-------------------EECSSSEEEEECT
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECC-CCCe---EEEEECCCEEE-------------------EECCCCeEEEEEC
Confidence 34555556899999999987665555432 1111 22344444443 4446789999999
Q ss_pred CCCeEEeeecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 272 VSSKCVATFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 272 ~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.+.+..+.-...+ ..++.+.|. +|+..+....++.|.+.|..+++.+..+.-.
T Consensus 134 ~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 134 HTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 998888777633221 136788888 7755555556889999999999999998753
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.65 E-value=1.3e-06 Score=82.74 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=118.6
Q ss_pred EEEECCCCCEEEEEeCCCe-------------------EEEEEcCCccccccCCCCC-CcCCCCCCceEEEecCCcCCeE
Q psy15157 124 AGAFSIDGQLCATGSVDAS-------------------IKILDVDRMLAKSSMESSE-PQNDQQGHPVIRTLYDHIEEVT 183 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~-------------------v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~ 183 (344)
.+++++++.+++.+..++. |..||..++.......... ...+ + .....+.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd---------~-~~~~~~~ 308 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD---------Y-TATQHMI 308 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC---------C-CCCSCEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc---------c-cCCCCcE
Confidence 5788888888888887764 8888887654433211000 0000 0 0111222
Q ss_pred EEEEcCCCC---EEEEEeCCCcEEEEEcCCCccccceeeecc--------------------------cc----------
Q psy15157 184 CLEFHPSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQE--------------------------ST---------- 224 (344)
Q Consensus 184 ~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~~---------- 224 (344)
......+++ .++.++.+|.++++|..+++.+........ ..
T Consensus 309 l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg 388 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA 388 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS
T ss_pred EEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc
Confidence 222223454 788899999999999999876532221100 00
Q ss_pred -ceEEEEEecCCCEEEEEeCCCEEEEEcCC--------CCEEEEEe------------------CCCcEEEEeCCCCeEE
Q psy15157 225 -FVRCLSFHPCGDYMVVGTDHFVLRLYSSD--------GRIYCSGS------------------KDGDIKIWDGVSSKCV 277 (344)
Q Consensus 225 -~v~~~~~~~~~~~l~~~~~~~~i~~~~~~--------~~~l~~~~------------------~dg~i~iwd~~~~~~~ 277 (344)
.-..++++|+...+++...+....++... +..+..+. .+|.|+.||+.+++.+
T Consensus 389 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~ 468 (689)
T 1yiq_A 389 HDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA 468 (689)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred cCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence 01126788888888877665444443211 01111111 2488999999999988
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+..+. ++..-.+...+.+++.|+.||.|+.||.++|+.+.+++..
T Consensus 469 W~~~~~~---~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 469 WEVPYVT---IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eEccCCC---CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 7775322 2333456667889999999999999999999999999855
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.64 E-value=1.1e-08 Score=89.79 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=76.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------ 251 (344)
++..+++++.||.|+.||..+++....+.. ..+.+..+..++..+++++.++.+..|+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467899999999999999999987655543 2333334455677777777888888762
Q ss_pred ---C---CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 252 ---S---DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 252 ---~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
| .+..+++|+.|+.|+.||..+|+.+..+.... ...++|++..+++++.|+.|+.||.++|+.+..+.
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 1 44567778889999999999999887765321 23456788899999999999999999999876665
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=1.8e-06 Score=76.51 Aligned_cols=179 Identities=9% Similarity=0.072 Sum_probs=111.6
Q ss_pred CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEcCC
Q psy15157 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDYSK 210 (344)
Q Consensus 141 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~ 210 (344)
+.|.++|..+ .+.+.++.--..+ .++++|+++.++.+. .++.|.++|..+
T Consensus 99 ~~VsVID~~t------------------~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 99 TQQFVIDGST------------------GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp EEEEEEETTT------------------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CeEEEEECCC------------------CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 6899999865 3445555433344 899999999777665 467899999999
Q ss_pred Cccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEEEcCC--------------------CCEEEEEeCC
Q psy15157 211 SSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRLYSSD--------------------GRIYCSGSKD 263 (344)
Q Consensus 211 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~--------------------~~~l~~~~~d 263 (344)
.+....+..... ......+.++|+|++++++.. ++.+.+.+.. .+.+++.+.|
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC
Confidence 876655543200 122345789999999999874 5677776322 1334555667
Q ss_pred CcEEEEeCCCCeEEee----e--------------------------------cccCC------------------C---
Q psy15157 264 GDIKIWDGVSSKCVAT----F--------------------------------SKAHD------------------G--- 286 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~----~--------------------------------~~~~~------------------~--- 286 (344)
|.+.+.+..+++.... + ..... +
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 7766666644332210 0 00000 0
Q ss_pred ccEEEEEEccCCCEEEEEeC----------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 287 AEISSLTFTRNGKYLLSSGK----------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.....++++|+++.+++... ++.|.++|+.+.+.+.++.... ....+.+++|+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg 381 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDA 381 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSS
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCC
Confidence 00112678888887776642 3579999999999999887543 23444555554
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.61 E-value=2.1e-06 Score=74.73 Aligned_cols=178 Identities=10% Similarity=-0.066 Sum_probs=111.8
Q ss_pred eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCC
Q psy15157 142 SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDYSKS 211 (344)
Q Consensus 142 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~ 211 (344)
+|.+.|..+ .+.+.++..-..+ .+.++|+++.++.+. .++.|.+||..+.
T Consensus 47 ~vsvID~~t------------------~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGC------------------GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTT------------------TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCC------------------CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 788999864 4455555444445 799999999887775 3789999999998
Q ss_pred ccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEE--EcCC-----------------CCEEEEEeCCCc
Q psy15157 212 SVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRL--YSSD-----------------GRIYCSGSKDGD 265 (344)
Q Consensus 212 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~--~~~~-----------------~~~l~~~~~dg~ 265 (344)
+....+..... ......++++|+|++++++.. ...+.+ ++.. .+.+++.+.|+.
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~ 186 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPAS 186 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTS
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCC
Confidence 87666553210 123456899999999999874 456777 6441 123344556666
Q ss_pred EEEEeCCC-----CeEE-------------------------------------------eeeccc-----CCC---ccE
Q psy15157 266 IKIWDGVS-----SKCV-------------------------------------------ATFSKA-----HDG---AEI 289 (344)
Q Consensus 266 i~iwd~~~-----~~~~-------------------------------------------~~~~~~-----~~~---~~v 289 (344)
+.+.|..+ ++.. ..+... ..+ ...
T Consensus 187 ~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 187 LAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp CEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred EEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 66666655 2211 000000 000 001
Q ss_pred EEEEEccCCCEEEEEeC---------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 290 SSLTFTRNGKYLLSSGK---------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..+.++|+++.++.+.. ++.+.++|+.+++.+..+.... ....+.+++|+
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg 325 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDG 325 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSS
T ss_pred eeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCC
Confidence 11679999998887543 2356699999999999887544 23444555554
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.60 E-value=5.7e-06 Score=67.55 Aligned_cols=164 Identities=10% Similarity=0.110 Sum_probs=107.2
Q ss_pred cCCCc--eEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE--EEEEcCC
Q psy15157 117 SHKSP--CRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT--CLEFHPS 190 (344)
Q Consensus 117 ~h~~~--v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~ 190 (344)
.|... ...+.|+ ++.++.+.+.+| .|+++|+.++ +.+..+.-. .... .++. +
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg------------------kv~~~~~l~-~~~FgeGit~--~ 95 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG------------------KTLQQIELG-KRYFGEGISD--W 95 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC------------------CEEEEEECC-TTCCEEEEEE--E
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCC------------------cEEEEEecC-CccceeEEEE--e
Confidence 45444 4889998 778888888776 8999999754 333333222 1222 2343 3
Q ss_pred CCEE-EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 191 APIL-ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 191 ~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
+..| ++.-.++.+.+||..+.+....+...... ..+ ++++..|+ ....++.|.++
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~gl--t~dg~~L~-------------------~SdGs~~i~~i 151 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGL--THNDQYLI-------------------MSDGTPVLRFL 151 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CCE--EECSSCEE-------------------ECCSSSEEEEE
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eEE--ecCCCEEE-------------------EECCCCeEEEE
Confidence 4444 44445899999999998776666543211 122 23444333 44456789999
Q ss_pred eCCCCeEEeeecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 270 DGVSSKCVATFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|..+.+.+..+.-...+ ..++.+.|. +|+..+..-.++.|.+.|.++|+.+..+...
T Consensus 152 Dp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 152 DPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp CTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred cCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 99999888777643222 235668887 7765555557889999999999999998764
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.56 E-value=2.6e-06 Score=80.61 Aligned_cols=187 Identities=13% Similarity=0.153 Sum_probs=116.8
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-----
Q psy15157 123 RAGAFSIDGQLCATGSVDA-------------------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH----- 178 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg-------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----- 178 (344)
..+++++++..++.+..++ +|..+|..++....... ...|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~----------------~~~~d~wd~ 309 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ----------------ETPGDNWDY 309 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE----------------SSTTCCSCC
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe----------------cCCCccccc
Confidence 3578888888888877664 47778876654333211 1111
Q ss_pred --cCCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCccccceeeeccc---------cce------------------
Q psy15157 179 --IEEVTCLEFHPSA---PILASGSKDKTVKMFDYSKSSVRKAHKTIQES---------TFV------------------ 226 (344)
Q Consensus 179 --~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~v------------------ 226 (344)
......+....+| ..++.++.+|.++++|..+++.+......... .++
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 1122223333466 57889999999999999999865444321100 001
Q ss_pred ------EEEEEecCCCEEEEEeCCCEEEEEcCC----C------------CEEEE--------EeCCCcEEEEeCCCCeE
Q psy15157 227 ------RCLSFHPCGDYMVVGTDHFVLRLYSSD----G------------RIYCS--------GSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 227 ------~~~~~~~~~~~l~~~~~~~~i~~~~~~----~------------~~l~~--------~~~dg~i~iwd~~~~~~ 276 (344)
..++++|++.++++...+-...++... | .++-. ....|.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 145777877777776543222222110 0 00000 01237899999999998
Q ss_pred EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 277 VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 277 ~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+..+... .++.+..+..++..++.++.||.+++||.++|+.+.++....
T Consensus 470 ~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 470 AWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 8777532 234445566788899999999999999999999999998543
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.50 E-value=1.4e-05 Score=65.33 Aligned_cols=162 Identities=9% Similarity=0.020 Sum_probs=106.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-ecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-LYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.-...+.|+ ++.++.+.+.+|.|+++|+.++... .. +... .--..+++.. +.++++.-
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~------------------~~~l~~~-~FgeGit~~g-~~Ly~ltw 113 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV------------------WMERLGN-IFAEGLASDG-ERLYQLTW 113 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS------------------EEEECTT-CCEEEEEECS-SCEEEEES
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE------------------eEECCCC-cceeEEEEeC-CEEEEEEc
Confidence 335788887 4778888889999999999764322 22 2211 1112355543 34555556
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.++.+.+||..+.+....+...... +.++ ++++.| +.+..++.|+++|..+.+.+.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt--~Dg~~L-------------------~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEG---WGLC--YWNGKL-------------------VRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCC---CCEE--EETTEE-------------------EEECSSSEEEEECTTTCCEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCCCce---eEEe--cCCCEE-------------------EEECCCCEEEEEcCCCCeEEE
Confidence 7899999999998776666543221 2222 333433 345568899999999998887
Q ss_pred eecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 279 TFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 279 ~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.-...+ ..++.+.|. +|+..+..-.+..|.+.|.++|+.+..+...
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred EEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 77533222 235778887 7765555556889999999999999988754
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.50 E-value=2.8e-05 Score=68.51 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=103.3
Q ss_pred CCCCEEEE-EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------C-CcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 129 IDGQLCAT-GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------D-HIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 129 ~~~~~l~s-g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+++++|+. |..+++|.|+|+.+. ....+...++. . -...-..+...|++ +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~--------------p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~ 157 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPN--------------PREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGN 157 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSC--------------TTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCC--------------CCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCC
Confidence 77776555 556788999998532 01123333332 0 11134456778999 77776666
Q ss_pred ------CcEEEEEcCCCccccceeeeccc-cceEEEEEecCCCEEEEEeCC---CEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy15157 201 ------KTVKMFDYSKSSVRKAHKTIQES-TFVRCLSFHPCGDYMVVGTDH---FVLRLYSSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 201 ------g~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~---~~i~~~~~~~~~l~~~~~dg~i~iwd 270 (344)
|.|.+.|..+.+.+......... ..-..+.|+|+++.+++.... +...-|.+. .+ .+-.+..|.+||
T Consensus 158 ~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~--~~-~~~~~d~V~v~D 234 (462)
T 2ece_A 158 EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE--HL-KDRYGNRIHFWD 234 (462)
T ss_dssp TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT--TH-HHHSCCEEEEEE
T ss_pred cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh--hh-hhccCCEEEEEE
Confidence 78999999988766555432222 223456778877766643200 000000000 00 002468899999
Q ss_pred CCCCeEEeeecccCCCccEEEEEE--ccCCCEEEEEe------CCCcEEEEEcCCC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTF--TRNGKYLLSSG------KDSLVKLWELSSA 318 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~s~~------~dg~i~vwd~~~~ 318 (344)
+.+++.+.++.....+.....+.| +|+++++++++ .+++|.+|....|
T Consensus 235 ~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 235 LRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp TTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred CCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 999988888875423334556666 99999988877 4668888776655
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.46 E-value=4.1e-06 Score=76.33 Aligned_cols=168 Identities=15% Similarity=0.041 Sum_probs=102.1
Q ss_pred CceEEEEE-C-CCCCEEEEEe------------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc
Q psy15157 120 SPCRAGAF-S-IDGQLCATGS------------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179 (344)
Q Consensus 120 ~~v~~~~~-s-~~~~~l~sg~------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 179 (344)
..+..+++ + |+++++++++ .++.+.+.|.+++. ....+.--.
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~------------------v~~qI~Vgg 195 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE------------------VAWQVLVSG 195 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE------------------EEEEEEESS
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe------------------EEEEEEeCC
Confidence 45788888 5 8999998885 24568888886532 222222111
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEEcCC--Cccccceee
Q psy15157 180 EEVTCLEFHPSAPILASGSKDK--------------------------------------TVKMFDYSK--SSVRKAHKT 219 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg--------------------------------------~i~iwd~~~--~~~~~~~~~ 219 (344)
.-..++++|+|+++++.+.+. .|.+.|..+ ++. ....
T Consensus 196 -~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~--~~~~ 272 (595)
T 1fwx_A 196 -NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL--FTRY 272 (595)
T ss_dssp -CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS--SEEE
T ss_pred -CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce--eEEE
Confidence 234567788888777776542 244444444 111 0011
Q ss_pred eccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------------EEeeecccCCCc
Q psy15157 220 IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK------------CVATFSKAHDGA 287 (344)
Q Consensus 220 ~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~ 287 (344)
..-.....++.++|||+++++ ++..+..|.++|+.+.+ .+..+.. +.
T Consensus 273 Ipvg~~PhGv~~sPDGk~v~V------------------~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v---G~ 331 (595)
T 1fwx_A 273 IPIANNPHGCNMAPDKKHLCV------------------AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL---GL 331 (595)
T ss_dssp EEEESSCCCEEECTTSSEEEE------------------ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---CS
T ss_pred EecCCCceEEEEcCCCCEEEE------------------eCCCCCeEEEEECcccccccccccCcccceEEEcCC---CC
Confidence 111122344556665555554 44567889999998653 3333332 23
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCC----------CeeEEEeecCCC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSS----------ARCLIAYTGAGS 329 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~ 329 (344)
....++|+|+|...++.--|+.|.+||+.+ .+.+.++..|..
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 478999999994444566899999999987 567777776643
No 236
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.44 E-value=0.00028 Score=59.78 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=101.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....++|+++|+++++-..++.|..||.+.. ....+ ........+++.++++++++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-------------------~~~~~-~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-------------------QQIHA-TVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-------------------EEEEE-ECSSEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-------------------eEEEE-eCCCCceeEEEcCCCcEEEEecc
Confidence 56789999999998777778899999987521 11111 12245889999999997666543
Q ss_pred CC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------------
Q psy15157 200 DK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------------- 251 (344)
Q Consensus 200 dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------------- 251 (344)
.. .|..+|..+++....... ........++..+++..+++...++.+..++
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred CCcceEEEEcCCCCeEEEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 32 466677666654322211 1112223333333332222222244443333
Q ss_pred -----CCCCE-EEEEeCCCcEEEEeCCC-CeE--EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 252 -----SDGRI-YCSGSKDGDIKIWDGVS-SKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 252 -----~~~~~-l~~~~~dg~i~iwd~~~-~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++++. +++-...+.|..||... ++. ...+... .....++++++|++.++....+.|.++|.. |+.
T Consensus 171 pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred CCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 33433 34444556788888764 321 1111111 124568999999987777778899999975 655
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.44 E-value=1.4e-05 Score=75.94 Aligned_cols=163 Identities=11% Similarity=0.132 Sum_probs=98.2
Q ss_pred CCCceEEEEECCCCCEEEEEeC----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSV----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP- 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 192 (344)
|...+..+.|||||++++.... +..|.+||+.+. ......+..+....... |++++.
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~-----------------~~~~~~l~~~~~~~~~~-~~~~g~~ 293 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE-----------------NAPLLTVQGDLDADVSL-VDNKGST 293 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST-----------------TCCCEEEECSSSSCEEE-EEEETTE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC-----------------CCceEEEeCCCCceEEE-EeccCCE
Confidence 3445788999999998754432 247899998632 11223444555555554 556655
Q ss_pred EEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC--cEE
Q psy15157 193 ILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG--DIK 267 (344)
Q Consensus 193 ~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg--~i~ 267 (344)
+++....+ +.|..+|+.++..........+...+. .|++++++|+.. ...++ .|+
T Consensus 294 l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~------------------~~~~g~~~l~ 353 (693)
T 3iuj_A 294 LYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE------------------YMVDATARVE 353 (693)
T ss_dssp EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE------------------EEETTEEEEE
T ss_pred EEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE------------------EEECCeeEEE
Confidence 44454443 679999998764311112223333333 777777666543 22333 688
Q ss_pred EEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCee
Q psy15157 268 IWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWELSSARC 320 (344)
Q Consensus 268 iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd~~~~~~ 320 (344)
+||+..+. ...+..... ..+..+.++++++.|+....+ +.|+.||+.+++.
T Consensus 354 ~~d~~g~~-~~~l~~p~~-~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 354 QFDYEGKR-VREVALPGL-GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EECTTSCE-EEEECCSSS-SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCCCe-eEEeecCCC-ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 89887543 344432222 357788888888876655444 7899999987753
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.40 E-value=0.00017 Score=58.30 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=107.5
Q ss_pred cCC--CceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcCCC
Q psy15157 117 SHK--SPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHPSA 191 (344)
Q Consensus 117 ~h~--~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~ 191 (344)
.|. .-...+.|+. +.++.+.+.+| .|+.+|+.++ +.+....-.... -..++.. .+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg------------------kv~~~~~l~~~~fgeGi~~~-~~ 75 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG------------------RILQRAEVPPPYFGAGIVAW-RD 75 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC------------------CEEEEEECCTTCCEEEEEEE-TT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC------------------CEEEEEeCCCCcceeEEEEe-CC
Confidence 454 4567899986 67777777754 8999999754 333333221111 1233433 23
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------------- 252 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------------- 252 (344)
++++..-.++.+.+||..+.+....+..... -..+ .+++..|+++..++.+.+++|
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPGE---GWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSSC---CCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---ceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 3455556689999999999877766664332 2333 357788888887888888732
Q ss_pred --------CCCEEEEEeCCCcEEEEeCCCCeEEeeeccc-----------CCCccEEEEEEccCCCEEEEEeC
Q psy15157 253 --------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKA-----------HDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 253 --------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+|+.++..-.+..|.+.|.++++.+..+... ....-.+.|+++|+++.|+..+.
T Consensus 151 ~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 151 NLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4555544446778999999999988776522 12235799999998877777663
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=0.00015 Score=61.93 Aligned_cols=208 Identities=9% Similarity=-0.030 Sum_probs=114.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcC-CCCCCceEEEecCCcCCeEEEEEcC-CCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQN-DQQGHPVIRTLYDHIEEVTCLEFHP-SAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 192 (344)
+.+.-....+++++++|+++.++..++.|..|+..+.............. ....................+++.+ ++.
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 44433456788899999977788889999999875321110000000000 0000000000000123578899998 555
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeee--ccccceEEEEEec-CCCEEEEEeC-----------------CCEEEEE--
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHP-CGDYMVVGTD-----------------HFVLRLY-- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~-----------------~~~i~~~-- 250 (344)
|+.+...+.|..+|..++......... ........+++++ +|...++... .+.+..|
T Consensus 94 -l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp -EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred -EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 444544555888887654322111111 1123467899999 8876665322 1333333
Q ss_pred --------------------cCCCCEEEEE-eCCCcEEEEeCCCCe--EEeeecccCCCccEEEEEEccCCCEEEEEeC-
Q psy15157 251 --------------------SSDGRIYCSG-SKDGDIKIWDGVSSK--CVATFSKAHDGAEISSLTFTRNGKYLLSSGK- 306 (344)
Q Consensus 251 --------------------~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~- 306 (344)
+++|+.++.+ +..+.|.+|++.... ....+.. .. + ...++++++|++.++...
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~-g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-N-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CS-S-EEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CC-C-CCCeEECCCCCEEEEecCc
Confidence 6677755444 556789999876421 1111111 11 2 678999999987666544
Q ss_pred ---------CCcEEEEEcCCCeeEEEeecC
Q psy15157 307 ---------DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 307 ---------dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.|..+|. .|+.+..+...
T Consensus 250 ~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDE-FGNILEVIPLP 278 (322)
T ss_dssp TTSSTTSCEEEEEEEECT-TSCEEEEEECC
T ss_pred ccccccCCCccEEEEECC-CCCEEEEEECC
Confidence 467888887 57777777654
No 240
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.27 E-value=0.00022 Score=60.19 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=110.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC----C--cCCeEEEEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD----H--IEEVTCLEF 187 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h--~~~v~~~~~ 187 (344)
+.....-..+++|.+....|..++ ..++|..|+...... ..+ .+.+ . ...+..|.|
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~----------------~~~-~~~~~s~~g~~~~~~sGl~~ 70 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH----------------FNV-VIDGASSNGDGEQQMSGLSL 70 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE----------------EEE-CCTTTCCSSCCSEEEEEEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE----------------EEE-ecCCccccCCCcceeeEEEE
Confidence 344445566788987555555555 799999999853211 011 1111 0 113579999
Q ss_pred ---cCCCCEEEEEe-------------CCCcEEEEEcC---CCccccceeeec-----------cccceEEEEEecCCCE
Q psy15157 188 ---HPSAPILASGS-------------KDKTVKMFDYS---KSSVRKAHKTIQ-----------ESTFVRCLSFHPCGDY 237 (344)
Q Consensus 188 ---~~~~~~l~s~~-------------~dg~i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~ 237 (344)
.|++.++++.. .+..|..+|+. +++......... .......++..++|+.
T Consensus 71 ~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 71 LTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp SSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred eccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 68877776543 26789999998 665543332211 1134788999999999
Q ss_pred EEEEeCC-CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 238 MVVGTDH-FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 238 l~~~~~~-~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.++++.. +.|...+|+|+.+ ..|.+.... .......+.|+++|+|+.|++....|.|..+|+.
T Consensus 151 YVt~s~~~~~I~rV~pdG~~~---------~~~~~~~~~-------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 151 YVAFALGMPAIARVSADGKTV---------STFAWESGN-------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEESSCEEEEECTTSCCE---------EEEEECCCC-------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EEeCCCCCCeEEEEeCCCCEE---------eeeeecCCC-------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 9888877 7777777777633 244433221 1112236789999999999888779999999987
Q ss_pred CC
Q psy15157 317 SA 318 (344)
Q Consensus 317 ~~ 318 (344)
+.
T Consensus 215 ~p 216 (334)
T 2p9w_A 215 KP 216 (334)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 241
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.0011 Score=54.22 Aligned_cols=180 Identities=11% Similarity=0.144 Sum_probs=116.2
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 192 (344)
+.+-...+..++|+|+++ ++++...++.|...|.. +..++.+. +-......|++.+++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-------------------g~v~~~i~l~g~~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-------------------GDLIRTIPLDFVKDLETIEYIGDNQ 82 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-------------------CCEEEEEECSSCSSEEEEEECSTTE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-------------------CCEEEEEecCCCCChHHeEEeCCCE
Confidence 445556899999999765 55557778888888874 33444432 2225678899998887
Q ss_pred EEEEEeCCCcEEEEEcCCCccc---cceee----eccccceEEEEEecCCCEEEEEeCCCEEEEE---------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVR---KAHKT----IQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~---~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------- 250 (344)
++++.-.++.+.++++...... ..... ...+.....++|+|.++.|+++.......+|
T Consensus 83 ~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~ 162 (255)
T 3qqz_A 83 FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK 162 (255)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec
Confidence 7777667788999988654321 11111 1234456899999999877777654433332
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-------CCccEEEEEEccCCCEEEEE
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-------DGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~l~s~ 304 (344)
...+++++.......+..+|.. ++.+..+.... .-...-.|+|+++|+. +..
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l-yIv 240 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI-YIV 240 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE-EEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCE-EEE
Confidence 1345677777777889999965 44544443221 1125689999999984 444
Q ss_pred eCCCcEEEEEc
Q psy15157 305 GKDSLVKLWEL 315 (344)
Q Consensus 305 ~~dg~i~vwd~ 315 (344)
++.+.++.+.-
T Consensus 241 sE~n~~y~f~~ 251 (255)
T 3qqz_A 241 SEPNRFYRFTP 251 (255)
T ss_dssp ETTTEEEEEEC
T ss_pred cCCceEEEEEe
Confidence 77776666654
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.22 E-value=3.2e-05 Score=74.13 Aligned_cols=160 Identities=8% Similarity=0.031 Sum_probs=91.6
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----eEEEEEcCCc-cccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 121 PCRAGAFS-IDGQLCATGSV-DA----SIKILDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 121 ~v~~~~~s-~~~~~l~sg~~-dg----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+...+|| |||+++|-+.. +| .|+++|+.++ ... ...+. .....++|+||++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--------------~~~~~------~~~~~~~WspDg~~ 234 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--------------ADKVS------GTNGEIVWGPDHTS 234 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--------------CCCEE------EECSCCEECSSTTE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--------------Ccccc------CceeeEEEecCCCE
Confidence 68889999 99998875443 23 4999999753 210 00011 11246789999987
Q ss_pred EEEEeCC-----CcEEEEEcCCCccccceeee-ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 194 LASGSKD-----KTVKMFDYSKSSVRKAHKTI-QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267 (344)
Q Consensus 194 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~ 267 (344)
|+-...| ..|+++++.++......... ........+.|+|+|++|+..... .....|+
T Consensus 235 l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~----------------~~~~~l~ 298 (751)
T 2xe4_A 235 LFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS----------------PETAEVH 298 (751)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC----------------SSCEEEE
T ss_pred EEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC----------------CCCceEE
Confidence 6665554 25888888765432111111 223345678899988888764321 1244688
Q ss_pred EEeCCCC--eE-EeeecccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEEcCC
Q psy15157 268 IWDGVSS--KC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWELSS 317 (344)
Q Consensus 268 iwd~~~~--~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd~~~ 317 (344)
++|+.++ +. +..+..... ....++.|+..+.+++....+ ..|..+|+.+
T Consensus 299 ~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 299 LLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 8888765 22 123322222 345566655444444444443 3577777764
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.22 E-value=3.9e-05 Score=72.61 Aligned_cols=184 Identities=13% Similarity=0.100 Sum_probs=113.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC------CCcE
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK------DKTV 203 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~i 203 (344)
++..++.++.|+.|..+|..++........... . .....+.+--.. .+..++.++. +|.|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~------~-------~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v 192 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEG------Q-------KGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYI 192 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTT------C-------CSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcC------c-------CcCcccccCcEE-ECCEEEEEecccccCCCCEE
Confidence 356788888999999999976544332211000 0 000011100000 1234444443 7999
Q ss_pred EEEEcCCCccccceeeeccc------------------------------cceEEEEEecCCCEEEEEeCCC--------
Q psy15157 204 KMFDYSKSSVRKAHKTIQES------------------------------TFVRCLSFHPCGDYMVVGTDHF-------- 245 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~~~~~~~-------- 245 (344)
+.||..+++....+...... .....++++|++..+++++.++
T Consensus 193 ~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 193 TAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVR 272 (677)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCC
Confidence 99999998866544322111 0113578889999998887664
Q ss_pred -----------EEEEE---------c-----------------------CCC---CEEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 246 -----------VLRLY---------S-----------------------SDG---RIYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 246 -----------~i~~~---------~-----------------------~~~---~~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
.+..+ . .+| ..++.++.+|.++++|..+|+.+..
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 24432 1 134 5788899999999999999998766
Q ss_pred ecccCC---------CccE------------------------EEEEEccCCCEEEEEeC--------------------
Q psy15157 280 FSKAHD---------GAEI------------------------SSLTFTRNGKYLLSSGK-------------------- 306 (344)
Q Consensus 280 ~~~~~~---------~~~v------------------------~~i~~~~~~~~l~s~~~-------------------- 306 (344)
+..... +.++ ..++++|++.++++...
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 542110 0111 15688998888877543
Q ss_pred -----------------------CCcEEEEEcCCCeeEEEeecC
Q psy15157 307 -----------------------DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 307 -----------------------dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|.|..||+.+|+.+-.++..
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 476 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV 476 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC
Confidence 278999999999998888754
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.21 E-value=3.6e-05 Score=72.68 Aligned_cols=187 Identities=13% Similarity=0.156 Sum_probs=112.3
Q ss_pred EEEEECCCCCEEEEEeCCCe-------------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc----
Q psy15157 123 RAGAFSIDGQLCATGSVDAS-------------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI---- 179 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~-------------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---- 179 (344)
..+++.++..+++.++.++. |..+|..++....... ...|.
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~----------------~~~~~~wd~ 296 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ----------------VTPGDSWDF 296 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE----------------SSTTCCSCC
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee----------------cCCCccccc
Confidence 35678888888888877663 7778876654333211 11111
Q ss_pred ---CCeEEEEEcCCCC---EEEEEeCCCcEEEEEcCCCccccceeeec----------cccce-----------------
Q psy15157 180 ---EEVTCLEFHPSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQ----------ESTFV----------------- 226 (344)
Q Consensus 180 ---~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v----------------- 226 (344)
.+.....+..+++ .++.++.+|.++++|..+++.+....... ...++
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~ 376 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPS 376 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSC
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCC
Confidence 2222222333554 68889999999999999987653222111 00000
Q ss_pred -------EEEEEecCCCEEEEEeCCCEEEEE------cCCCCE----------EE-EEeCCCcEEEEeCCCCeEEeeecc
Q psy15157 227 -------RCLSFHPCGDYMVVGTDHFVLRLY------SSDGRI----------YC-SGSKDGDIKIWDGVSSKCVATFSK 282 (344)
Q Consensus 227 -------~~~~~~~~~~~l~~~~~~~~i~~~------~~~~~~----------l~-~~~~dg~i~iwd~~~~~~~~~~~~ 282 (344)
..++++|+...+++...+-..... .+.+.. .+ ....+|.|..||..+++.+.....
T Consensus 377 ~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~ 456 (668)
T 1kv9_A 377 PFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY 456 (668)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE
T ss_pred CccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC
Confidence 115667766666654432211111 110000 00 223458899999999998877653
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.. +.....+...+.+++.++.||.|++||.++|+.+..++...
T Consensus 457 ~~---~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 457 PT---HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp SS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CC---CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 22 23333445578899999999999999999999999997653
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.19 E-value=0.00021 Score=57.75 Aligned_cols=152 Identities=14% Similarity=0.113 Sum_probs=103.0
Q ss_pred ceEEEecCCcC--CeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCC
Q psy15157 170 PVIRTLYDHIE--EVTCLEFHPSAPILASGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~ 244 (344)
+.+.++ .|.. -...+.|++ +.++.+.+.+| .|+.+|+.+++........... .-..+++ .++.++.. -.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~--~~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVA--WRDRLIQLTWRN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTEEEEEESSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEE--eCCEEEEEEeeC
Confidence 445555 5543 456899986 56777777754 8999999999876655443221 1222333 34455444 456
Q ss_pred CEEEEE--------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC---ccEEEEEEccCCCEE
Q psy15157 245 FVLRLY--------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG---AEISSLTFTRNGKYL 301 (344)
Q Consensus 245 ~~i~~~--------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l 301 (344)
+.+.+| .+++..|+.+..++.|.++|..+.+.+..+.-...+ ..++-+.|. +|+..
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred CEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 777776 345666666677889999999999888777643221 236777776 67655
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 302 LSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+..-.+..|.+.|.++|+.+..+.-.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECG
T ss_pred EEECCCCeEEEEECCCCCEEEEEECC
Confidence 55556889999999999999998754
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=0.00027 Score=61.63 Aligned_cols=132 Identities=9% Similarity=0.015 Sum_probs=83.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccc-----eEEEEEec--CCCEEEEEeCCCEEEEEcC------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-----VRCLSFHP--CGDYMVVGTDHFVLRLYSS------------ 252 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~~~--~~~~l~~~~~~~~i~~~~~------------ 252 (344)
..++.++.++.|..+|..+++............. +..+...| .+..+++++.++.+..+++
T Consensus 189 ~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~ 268 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG 268 (376)
T ss_dssp TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC
Confidence 4677788899999999998876544432111000 00000011 2455666666665555422
Q ss_pred -------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 253 -------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 253 -------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
++..++.++.++.|..+|..+++.+........ ..+.+... .+..|+.++.+|.|+++|..+|+.+..+.
T Consensus 269 ~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 269 SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 345667788899999999999988766542111 12333333 25678889999999999999999988877
Q ss_pred c
Q psy15157 326 G 326 (344)
Q Consensus 326 ~ 326 (344)
.
T Consensus 346 ~ 346 (376)
T 3q7m_A 346 V 346 (376)
T ss_dssp C
T ss_pred c
Confidence 5
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.17 E-value=8.4e-05 Score=67.79 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=110.0
Q ss_pred CCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEE-c-CCCCEEEEEe-------
Q psy15157 130 DGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEF-H-PSAPILASGS------- 198 (344)
Q Consensus 130 ~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~-~~~~~l~s~~------- 198 (344)
||+++..... ++.|.+.|+.++. ....+. ........+++ + |++.+++.++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~------------------~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMK------------------CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE------------------EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred CCCEEEEEcCCCCEEEEEECCCce------------------EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 7887666554 5679999997642 223221 12234678887 4 8888887774
Q ss_pred -----------CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC---------------EEEEE--
Q psy15157 199 -----------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---------------VLRLY-- 250 (344)
Q Consensus 199 -----------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---------------~i~~~-- 250 (344)
.++.+.+.|..+.+....+...+ ....++++|+|+++++.+.+. .+.++
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~ 238 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 238 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence 34679999999876655555432 234577999999999988653 34443
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCC--CeE-EeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVS--SKC-VATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~--~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~ 318 (344)
.++|++... +.|.+.|.++ ++. +..+.... ...++.++|||+++++++ .+.+|.++|+.+.
T Consensus 239 ~~~~~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 239 AEIEKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp HHHHHHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cceeEeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 345655443 4599999998 544 45554332 357899999999887665 6889999999865
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.16 E-value=0.00066 Score=59.11 Aligned_cols=182 Identities=12% Similarity=0.044 Sum_probs=98.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
.+..+++++.++.|..+|..++............ .........+.+.. ..++..++.++.++.|..+|..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~ 121 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKD---------GWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTS 121 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------------CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETT
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcccc---------ccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECC
Confidence 3567777888899999998765433221100000 00000012222211 1234577778889999999999
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC--------------------------CCCEEEEEeCC
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------------DGRIYCSGSKD 263 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------------~~~~l~~~~~d 263 (344)
+++........... ...... .+..+++++.++.+..+++ .+..++.++.+
T Consensus 122 tG~~~W~~~~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~ 197 (376)
T 3q7m_A 122 DGTVAWQTKVAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDN 197 (376)
T ss_dssp TCCEEEEEECSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTT
T ss_pred CCCEEEEEeCCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCC
Confidence 88765444322111 111111 2446666776776665521 12456677888
Q ss_pred CcEEEEeCCCCeEEeeecccCCCcc-----EEEEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAE-----ISSLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~-----v~~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+..+|..+++.+........... +..+.-.| .+..++.++.++.+..+|.++|+.+..+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 9999999999987765542210000 00000011 23456666677777777777777665554
No 249
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.16 E-value=8.4e-05 Score=70.45 Aligned_cols=133 Identities=12% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC---CCCEEEEEe-----CCCc
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP---SAPILASGS-----KDKT 202 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~-----~dg~ 202 (344)
+..++.++.|+.|..+|..++.......... +......+..+| ++..++..+ .+|.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~----------------~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~ 184 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA----------------DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGY 184 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCS----------------CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcC----------------CCCCCccccCCcEEECCEEEEEeCCCccCCCCE
Confidence 5678888899999999998765443221100 000000001111 343333222 3789
Q ss_pred EEEEEcCCCccccceeeecc-----------------------------ccceEEEEEecCCCEEEEEeCCCE-------
Q psy15157 203 VKMFDYSKSSVRKAHKTIQE-----------------------------STFVRCLSFHPCGDYMVVGTDHFV------- 246 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~~~~------- 246 (344)
|+.||..+++....+..... ......++++|++..+++++.++.
T Consensus 185 v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~ 264 (689)
T 1yiq_A 185 VTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWR 264 (689)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCC
Confidence 99999999986554432110 001125788898888988887753
Q ss_pred ------------EEEEcC--------------------------------CCC---EEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 247 ------------LRLYSS--------------------------------DGR---IYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 247 ------------i~~~~~--------------------------------~~~---~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
+..+++ +|+ .++.++.+|.++++|.++|+.+..
T Consensus 265 ~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 265 SQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp HTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 444310 122 577888999999999999998743
No 250
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.14 E-value=0.0014 Score=55.94 Aligned_cols=174 Identities=13% Similarity=0.238 Sum_probs=109.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC----CC---EEE-EEeC--
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS----AP---ILA-SGSK-- 199 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~---~l~-s~~~-- 199 (344)
...+++.....+-+.+||+. ++.+..+.. +.++.+..-|+ ++ +++ +.-.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-------------------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~ 97 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-------------------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEG 97 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-------------------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTT
T ss_pred CccEEEEEcCCCCEEEEcCC-------------------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCC
Confidence 44566666778889999995 445555543 55666666552 22 233 3333
Q ss_pred CCcEEEEEcC--CCcccccee-----eeccccceEEEEE--ecC-CC-EEEEEeCCCEEEEE------------------
Q psy15157 200 DKTVKMFDYS--KSSVRKAHK-----TIQESTFVRCLSF--HPC-GD-YMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 200 dg~i~iwd~~--~~~~~~~~~-----~~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~~------------------ 250 (344)
+++|.+|++. ++.. ..+. .......+..+++ +|. +. ++++...++.+..|
T Consensus 98 ~n~l~vf~iDp~~~~l-~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTL-QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCCE-EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCce-eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5889999774 3322 1111 0011134555666 674 43 67888888888876
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCC-----CCeEEeeecccCCCccEEEEEE--ccCCC-EEEEEe-CCCcE
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGV-----SSKCVATFSKAHDGAEISSLTF--TRNGK-YLLSSG-KDSLV 310 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~~~v~~i~~--~~~~~-~l~s~~-~dg~i 310 (344)
++....|+.+-.+.-|..+|.+ +++.+..+...+-...+..|++ .++++ ||++++ .++..
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 5667788888888777777855 3455555532322235788877 45566 666666 67789
Q ss_pred EEEEcC-CCeeEEEee
Q psy15157 311 KLWELS-SARCLIAYT 325 (344)
Q Consensus 311 ~vwd~~-~~~~~~~~~ 325 (344)
.+||.. +.+.+..|.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999997 678888886
No 251
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.10 E-value=0.00021 Score=58.83 Aligned_cols=154 Identities=10% Similarity=0.037 Sum_probs=97.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTV 203 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 203 (344)
.+++. .+++.++.-.++.+.++|..+. +.+.++..-... ...++++++.++.+..++.|
T Consensus 70 Gi~~~-g~~lyv~t~~~~~v~viD~~t~------------------~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l 128 (266)
T 2iwa_A 70 GLTLL-NEKLYQVVWLKNIGFIYDRRTL------------------SNIKNFTHQMKD--GWGLATDGKILYGSDGTSIL 128 (266)
T ss_dssp EEEEE-TTEEEEEETTCSEEEEEETTTT------------------EEEEEEECCSSS--CCEEEECSSSEEEECSSSEE
T ss_pred EEEEe-CCEEEEEEecCCEEEEEECCCC------------------cEEEEEECCCCC--eEEEEECCCEEEEECCCCeE
Confidence 34444 2344555556889999998653 334444211111 12345577766666678999
Q ss_pred EEEEcCCCccccceeeecccc---ceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 204 KMFDYSKSSVRKAHKTIQEST---FVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
.++|..+.+....+....... .++.+.|. +| .++ +....++.|.+.|..+++.+..+
T Consensus 129 ~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ly------------------vn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 129 YEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVW------------------ANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEE------------------EEETTSSEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEE------------------EecCCCCeEEEEECCCCcEEEEE
Confidence 999998877655554432222 25566665 33 232 24445778999999999988877
Q ss_pred ccc-----------CCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCC
Q psy15157 281 SKA-----------HDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSA 318 (344)
Q Consensus 281 ~~~-----------~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~ 318 (344)
... ......+.|+|+|+++.+ +++...+.|++.++...
T Consensus 189 ~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 189 LLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 532 111246999999998765 55557888999888664
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.10 E-value=0.00025 Score=66.91 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=47.9
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCC
Q psy15157 124 AGAFSI-DGQLCATGSVDA-----------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPS 190 (344)
Q Consensus 124 ~~~~s~-~~~~l~sg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~ 190 (344)
++++.+ ++++++.|+.+. .+.+||..+. .+..+..+ ..+.....++++..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~----------------~w~~~~~~~~~~~~~~~~~~~~~~ 253 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG----------------IVSDRTVTVTKHDMFCPGISMDGN 253 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC----------------CBCCCEEEECSCCCSSCEEEECTT
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC----------------cEEeCcccCCCCCCccccccCCCC
Confidence 556666 888888887643 5778887642 12222222 223333445677889
Q ss_pred CCEEEEEeC-CCcEEEEEcCCCcc
Q psy15157 191 APILASGSK-DKTVKMFDYSKSSV 213 (344)
Q Consensus 191 ~~~l~s~~~-dg~i~iwd~~~~~~ 213 (344)
+.+++.|+. +..+.+||..+.+.
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CCEEEeCCCCCCceEEecCcCCce
Confidence 999999884 46899999877543
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.02 E-value=0.0003 Score=59.84 Aligned_cols=168 Identities=14% Similarity=0.046 Sum_probs=98.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..+.++...+++. +..|+.++.|..||.. +.....+......+.++...+++.+++. +
T Consensus 137 ~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-------------------g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t- 194 (330)
T 3hxj_A 137 AIYATPIVSEDGT-IYVGSNDNYLYAINPD-------------------GTEKWRFKTNDAITSAASIGKDGTIYFG-S- 194 (330)
T ss_dssp CCCSCCEECTTSC-EEEECTTSEEEEECTT-------------------SCEEEEEECSSCCCSCCEECTTCCEEEE-S-
T ss_pred ceeeeeEEcCCCE-EEEEcCCCEEEEECCC-------------------CCEeEEEecCCCceeeeEEcCCCEEEEE-e-
Confidence 3445555555555 4445566777777764 2222233333445566677777765544 3
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCC---------------------CCEEE
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD---------------------GRIYC 258 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~---------------------~~~l~ 258 (344)
+.|..+| .+++...... .....+.++..+++|. +.+++.++.+..++++ +..+.
T Consensus 195 -~~l~~~d-~~g~~~~~~~--~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 269 (330)
T 3hxj_A 195 -DKVYAIN-PDGTEKWNFY--AGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIY 269 (330)
T ss_dssp -SSEEEEC-TTSCEEEEEC--CSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEE
T ss_pred -CEEEEEC-CCCcEEEEEc--cCCcceeceEECCCCe-EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEE
Confidence 7889999 5554332222 2234466677777664 4455555555544221 23455
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.++.+|.|..+|. +++....+... ...+.++..+++|+ |+.++.+|.+++......
T Consensus 270 v~t~~ggl~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTEKWNFETG--SWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EECTTCEEEEECT-TSCEEEEEECS--SCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred EecCCCCEEEECC-CCcEEEEEEcC--CccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 6788888999995 67766555422 23467777777776 566888999998876543
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.01 E-value=0.00034 Score=57.16 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=83.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Q psy15157 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGS 261 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 261 (344)
...+.|+ ++.++.+.+.+|.|+++|+.+++..... .. .......+++ .++.|+ +..-
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~--~g~~Ly------------------~ltw 113 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLAS--DGERLY------------------QLTW 113 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEE--CSSCEE------------------EEES
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEE--eCCEEE------------------EEEc
Confidence 4688887 4567888888999999999999876655 32 2212222333 333333 3455
Q ss_pred CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.++.+.+||..+.+.+.++.....+ ..++ +|++.|+.+..++.|.++|..+.+.+.++.-
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEG---WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCC---CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCCEEEEEECCcCcEEEEEeCCCce---eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 7889999999999999998744332 3444 4678888877799999999999998888764
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.99 E-value=0.00023 Score=58.07 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=86.0
Q ss_pred EEEecCCcCC--eEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 172 IRTLYDHIEE--VTCLEFHPSAPILASGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 172 ~~~~~~h~~~--v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
+.++ .|... ...+.|+ ++.++.+.+.+| .|+++|+.+++.......... .....+++ .++.++.
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~--~g~~ly~------- 101 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISD--WKDKIVG------- 101 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEE--ETTEEEE-------
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEE--eCCEEEE-------
Confidence 4444 45443 4788898 677777888776 899999999987655543221 11122333 2333332
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 248 RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 248 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..-.++.+.+||..+.+.+.++.-...+ ..++ ++++.|+.+..++.|.++|..+.+.+.++.-
T Consensus 102 -----------ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 102 -----------LTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp -----------EESSSSEEEEEETTTCCEEEEEECSSCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred -----------EEeeCCEEEEEECccCcEEEEEECCCCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 4456889999999999999988744332 2344 4677777776688899999999988888764
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.00074 Score=60.15 Aligned_cols=157 Identities=11% Similarity=0.166 Sum_probs=88.6
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
....++++| ++..|..+...+.|+.+|.... .+..+.........++|+++++.|+.+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-------------------~v~~~~~~~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-------------------YVSTVYSGLSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-------------------EEEEEECCCSCEEEEEECTTSSEEEEEEC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-------------------EEEEEecCCCCcceEEEeCCCCEEEEEeC
Confidence 457889997 3555555555578888887531 22333334556889999999995555443
Q ss_pred -CC----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 200 -DK----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 200 -dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++ .+...+ ..+...... ..........++++|++ |.++++-..++.|..||...+
T Consensus 199 ~~~~~~~~v~~~~-~~g~~~~~~-~l~~~~~p~giavdp~~------------------g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 199 QNNNDRPNNYILT-RESGFKVIT-ELTKGQNCNGAETHPIN------------------GELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CSCTTSEEEEEEE-GGGTSCSEE-EEEECSSCCCEEECTTT------------------CCEEEEETTTTEEEEEETTTT
T ss_pred CCCcccceEEEEe-CCCceeeee-eeccCCCceEEEEeCCC------------------CEEEEEECCCCEEEEEECCCC
Confidence 22 233333 333322111 11112234556677732 222334445567777777665
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCC
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSS 317 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~ 317 (344)
.......... ....+.++|+|+|++|+.+ ...+.|+.++...
T Consensus 259 ~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 259 ETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 5422222111 1346889999999965544 5678899988753
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.95 E-value=0.0011 Score=61.55 Aligned_cols=137 Identities=14% Similarity=0.217 Sum_probs=85.1
Q ss_pred CCCC---EEEEEeCCCcEEEEEcCCCccccceeeeccc-----------cc-----------------------------
Q psy15157 189 PSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQES-----------TF----------------------------- 225 (344)
Q Consensus 189 ~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~----------------------------- 225 (344)
.+|+ .++.++.+|.++++|..+++.+......... .+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 4563 7888999999999999998765443321100 00
Q ss_pred ---eEEEEEecCCCEEEEEeCCCEEEEEcC-----CCCEEEE---------EeCCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 226 ---VRCLSFHPCGDYMVVGTDHFVLRLYSS-----DGRIYCS---------GSKDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 226 ---v~~~~~~~~~~~l~~~~~~~~i~~~~~-----~~~~l~~---------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
-..++++|+...+++...+-...++.. .|..++. ...+|.|.-||+.+++.+....... +
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~---~ 487 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL---P 487 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS---C
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC---C
Confidence 013456666666666554433333211 1111100 1246889999999999887665322 1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+..-.....+.+++.++.||.++.||.++|+.+.+++...
T Consensus 488 ~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 488 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 2221222346788889999999999999999999998654
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.92 E-value=0.0072 Score=52.88 Aligned_cols=187 Identities=11% Similarity=-0.017 Sum_probs=109.6
Q ss_pred CCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
....+..++|++.+. ++.+-...+.|..++.+.. .....+.........+++.+.+. +++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~------------------~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS------------------NVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------CEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC------------------CcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 345678999997544 5555556788888887531 11122222223456788887544 556
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY----------------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~----------------------- 250 (344)
+-...+.|.+.++..... ..+ ..........++++|.+..|+..... +.|..+
T Consensus 176 ~d~~~~~I~~~~~dg~~~-~~l-~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav 253 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHR-KVL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTI 253 (386)
T ss_dssp EETTTTEEEECBTTSCSC-EEE-ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EcCCCCeEEEEeCCCCce-EEe-ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEE
Confidence 666678888888765422 111 12233457889999877777665533 455544
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++ ++++++-...+.|..+|.........+. .. ......+++ ..+..+++....+.|..++..+|+.+..+...
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECS
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CC-CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccC
Confidence 332 2333344445667777765432222222 11 124677888 35566666667888999997788777666543
No 259
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.0065 Score=50.00 Aligned_cols=159 Identities=12% Similarity=0.071 Sum_probs=93.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.....+++++++. ++++-...+.|.+++.+... . .............++++|++..|+.+.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~----------------~--~~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ----------------R--RVLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----------------C--EEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC----------------E--EEEEECCCCCccEEEEeeCCCEEEEEE
Confidence 5789999998655 45555557789999885210 0 111111224568999999655544444
Q ss_pred C---CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEcCCC--------------------
Q psy15157 199 K---DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYSSDG-------------------- 254 (344)
Q Consensus 199 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~~~~-------------------- 254 (344)
. .+.|..+++.... ...+. .........+++++++..|+++. ..+.|..+++++
T Consensus 141 ~~~~~~~I~~~~~dg~~-~~~~~-~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~ 218 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTN-RRILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYG 218 (267)
T ss_dssp CCSSSCEEEEEETTSCC-CEEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEET
T ss_pred CCCCCcEEEEEecCCCC-cEEEE-ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeC
Confidence 3 4688888876432 22221 12234578899999887776655 456676664332
Q ss_pred C-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC
Q psy15157 255 R-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299 (344)
Q Consensus 255 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 299 (344)
. ++++....+.|..+|..+++.+..+..... .....+++.|++.
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~-~~p~gi~~~~~~~ 263 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ-TRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEECCSSC-CCCCCEEEECSCC
T ss_pred CEEEEEECCCCeEEEEeCCCCCceEEEccccc-cccceeeecCccC
Confidence 2 333333456777777777777766643221 1245666666653
No 260
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.87 E-value=0.012 Score=51.77 Aligned_cols=193 Identities=11% Similarity=-0.035 Sum_probs=111.6
Q ss_pred cCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 194 (344)
.....+..++|++.+. ++.+-...+.|+.++++.... .......+.........+++.+ .++++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~--------------~~~~~~~~~~~~~~p~glavD~~~~~lY 174 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--------------VSSYDTVISRDIQAPDGLAVDWIHSNIY 174 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------------------CCCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC--------------CCcceEEEeCCCCCcccEEEEecCCceE
Confidence 3456788999998555 444444567888888753100 0111222333445678899988 45566
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY---------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~---------------------- 250 (344)
++-...+.|.+.++......... .........++++|.+.+|+.... .+.|...
T Consensus 175 ~~d~~~~~I~~~~~~g~~~~~l~--~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 175 WTDSVLGTVSVADTKGVKRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 252 (400)
T ss_dssp EEETTTTEEEEECTTTCSEEEEE--ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEECCCCeEEEEeCCCCceEEEE--eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEE
Confidence 66667789999998754322211 223345788999997777766552 2444443
Q ss_pred -cCCCCEE-EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 -SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 -~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++++..| ++-...+.|..+|+........+..........++++. .+.++++-...+.|..+|..+|+.+..+..
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 4333333 33344566777776543322222211111235677774 445666667778899999888877666653
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.84 E-value=0.0011 Score=56.27 Aligned_cols=165 Identities=12% Similarity=0.065 Sum_probs=96.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (344)
+..+..++.++.|..+|.. + ........+...+.++...+++. ++.++.++.|..+|..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g------------------~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~- 165 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G------------------TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD- 165 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S------------------CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-
T ss_pred CCEEEEEecCCEEEEEcCC-C------------------CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-
Confidence 3445566667777777753 1 22222223333455566666666 5557778999999987
Q ss_pred CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEE
Q psy15157 211 SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 211 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~i 268 (344)
++...... .....+.++...+++... +++ +.+..+ +++| .+..++.++.|..
T Consensus 166 g~~~~~~~--~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 166 GTEKWRFK--TNDAITSAASIGKDGTIY-FGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDG-TIYVTSLDGHLYA 239 (330)
T ss_dssp SCEEEEEE--CSSCCCSCCEECTTCCEE-EES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTS-CEEEEETTTEEEE
T ss_pred CCEeEEEe--cCCCceeeeEEcCCCEEE-EEe--CEEEEECCCCcEEEEEccCCcceeceEECCCC-eEEEEcCCCeEEE
Confidence 55433332 223345556666666543 344 333333 3344 3455677788888
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+|. +++.+..+.... ..+.++.+.+++. |..++.+|.|..+|. +++.+..+...
T Consensus 240 ~~~-~g~~~~~~~~~~--~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~ 293 (330)
T 3hxj_A 240 INP-DGTEKWRFKTGK--RIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETG 293 (330)
T ss_dssp ECT-TSCEEEEEECSS--CCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECS
T ss_pred ECC-CCCEeEEeeCCC--CccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcC
Confidence 874 555555554222 2234456665664 677788889999996 78877777643
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.0041 Score=55.31 Aligned_cols=117 Identities=20% Similarity=0.258 Sum_probs=69.3
Q ss_pred CCCceEEEEECCCCCEEEEEeC-CC----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSV-DA----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
.......++|+++|++|+.+.. ++ .+.+++... .......+. .......++++| ++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-----------------~~~~~~~l~-~~~~p~giavdp~~g 238 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-----------------GFKVITELT-KGQNCNGAETHPING 238 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-----------------TSCSEEEEE-ECSSCCCEEECTTTC
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-----------------ceeeeeeec-cCCCceEEEEeCCCC
Confidence 4456889999999995555544 22 233333321 011011111 123356788999 67
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSD 253 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~ 253 (344)
.++++-..++.|..+|...+.... +...........++|+|+|++|+++ ...+.|..++.+
T Consensus 239 ~lyv~d~~~~~V~~~~~~~~~~~~-~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 239 ELYFNSWNAGQVFRYDFTTQETTP-LFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEE-EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEE-EEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 777777678899999987654321 1112222456789999999966555 456677776544
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.82 E-value=0.0023 Score=59.40 Aligned_cols=136 Identities=14% Similarity=0.205 Sum_probs=87.8
Q ss_pred CCC---CEEEEEeCCCcEEEEEcCCCccccceeeec-----------cccce--------------------------EE
Q psy15157 189 PSA---PILASGSKDKTVKMFDYSKSSVRKAHKTIQ-----------ESTFV--------------------------RC 228 (344)
Q Consensus 189 ~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v--------------------------~~ 228 (344)
.+| ..++.++.+|.+.++|..+++.+....... ...++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 456 467778899999999999987654433211 00011 24
Q ss_pred EEEecCCCEEEEEeCCCEEEEEc-----CCCCE-------EEE--Ee------CCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 229 LSFHPCGDYMVVGTDHFVLRLYS-----SDGRI-------YCS--GS------KDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~i~~~~-----~~~~~-------l~~--~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
++++|+..++++...+....... ..+.. +.. .+ .+|.|.-||+.+++.+....... +
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~---~ 474 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF---A 474 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS---C
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC---C
Confidence 67888888888876554333221 11111 111 01 45889999999999887764221 1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+-.+...+..++.++.||.++.||.++|+.+.+++-.
T Consensus 475 ~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 475 VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 111112335678888999999999999999999998754
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.80 E-value=0.014 Score=50.35 Aligned_cols=185 Identities=11% Similarity=-0.003 Sum_probs=109.6
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s 196 (344)
...+..++|++.+. ++.+-...+.|..++.+.. .....+.........+++.+.+ .++++
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~------------------~~~~~~~~~~~~p~glavd~~~g~ly~~ 133 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGS------------------NVEEVVSTGLESPGGLAVDWVHDKLYWT 133 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCC------------------CceEEEeCCCCCccEEEEecCCCeEEEE
Confidence 34578999997555 4445456788888887531 1111222223345688888754 45566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY-----------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~-----------------------~ 251 (344)
-...+.|.+.++..... ..+ ..........++++|.+..++..... +.|..+ +
T Consensus 134 d~~~~~I~~~~~dG~~~-~~l-~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 134 DSGTSRIEVANLDGAHR-KVL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTID 211 (349)
T ss_dssp ETTTTEEEEEETTSCSC-EEE-ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEE
T ss_pred cCCCCeEEEEcCCCCce-EEE-EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEe
Confidence 66678999999875432 211 12233456889999977766665432 455544 4
Q ss_pred CCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 252 SDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 252 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+++ .++++-...+.|..+|.........+. .. .....++++. ++..+++-...+.|..++..+|+.+..+..
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~-~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CC-CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 333 333444445667777765432222222 11 1346778883 556666666788899998777776666653
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.79 E-value=0.0018 Score=59.87 Aligned_cols=136 Identities=15% Similarity=0.181 Sum_probs=88.3
Q ss_pred CCCC---EEEEEeCCCcEEEEEcCCCccccceeeecc-----------ccce--------------------------EE
Q psy15157 189 PSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQE-----------STFV--------------------------RC 228 (344)
Q Consensus 189 ~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~v--------------------------~~ 228 (344)
.+|+ .++.++.+|.+.++|..+++.+........ ..++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4663 577888899999999999876544332210 0111 23
Q ss_pred EEEecCCCEEEEEeCCCEEEEEcC-----CCCEEEEE--------------eCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 229 LSFHPCGDYMVVGTDHFVLRLYSS-----DGRIYCSG--------------SKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~i~~~~~-----~~~~l~~~--------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
++++|++..+++...+....++.. .|..+ .| ..+|.|..||..+++.+..+.... .+
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---~~ 466 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFF-VGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---AA 466 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC-CCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS---CC
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCcc-ccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC---Cc
Confidence 578888888888766544333311 11111 11 246899999999999887765322 12
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.+..+...+..++.++.||.|+.||.++|+.+.+++...
T Consensus 467 ~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 467 WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 222233356678889999999999999999999998543
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.74 E-value=0.032 Score=53.73 Aligned_cols=183 Identities=9% Similarity=0.089 Sum_probs=110.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.++...++|.+- .|+.++-|..|+..+......... .. .-.-....|.++...+++.+ ..|+.
T Consensus 310 ~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~-------~~-----~~~l~~~~V~~i~~d~~g~l-WiGt~ 375 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNI-------PY-----KNSLSDNVVSCIVEDKDKNL-WIGTN 375 (795)
T ss_dssp SCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCC-------TT-----SSSCSCSSEEEEEECTTSCE-EEEES
T ss_pred CcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCC-------CC-----CCCCCCCeeEEEEECCCCCE-EEEEC
Confidence 568899888888754 455666788888653211110000 00 00012456899998888864 44777
Q ss_pred CCcEEEEEcCCCccccceeee------ccccceEEEEEecCCCEEEEEeCCCEEEEEc----------------------
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTI------QESTFVRCLSFHPCGDYMVVGTDHFVLRLYS---------------------- 251 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~---------------------- 251 (344)
++-|..||..++......... .....|.++..+++|..|.+|+.++-+..|+
T Consensus 376 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~ 455 (795)
T 4a2l_A 376 DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY 455 (795)
T ss_dssp SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE
T ss_pred CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE
Confidence 778999998765432211100 1235689999988888566777644444442
Q ss_pred -----CCCCEEEEEeCCCcEEEEeCCCCeEEeeecc----cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 252 -----SDGRIYCSGSKDGDIKIWDGVSSKCVATFSK----AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 252 -----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++|.+. .|+. +-+.+||..+++....... ......|.++..+++|++.+.. . +-|..||..+++.
T Consensus 456 ~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 456 AILPDGEGNLW-LGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEECSSSCEE-EEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE
T ss_pred EEEECCCCCEE-EEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE
Confidence 234433 3444 4588899887765433211 1112468999999988865544 4 5588999887765
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.73 E-value=0.0028 Score=53.91 Aligned_cols=166 Identities=9% Similarity=0.042 Sum_probs=85.7
Q ss_pred ceEEEEECC-CCCEEEEEeC-----------------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCe
Q psy15157 121 PCRAGAFSI-DGQLCATGSV-----------------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV 182 (344)
Q Consensus 121 ~v~~~~~s~-~~~~l~sg~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 182 (344)
..+.+++.+ +|++.++-.. ++.|..||..++ . ...+.......
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~------------------~-~~~~~~~~~~p 187 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK------------------E-TTLLLKELHVP 187 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT------------------E-EEEEEEEESCC
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC------------------E-EEEeccCCccC
Confidence 468899999 8887766432 356777776432 1 11111112234
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Q psy15157 183 TCLEFHPSAPILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGS 261 (344)
Q Consensus 183 ~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 261 (344)
..++|+++++.|+ +-+.++.|.+|++................ ...++++++|.+.++....... .+. -+
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~---~~~------~~ 257 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG---NMH------GR 257 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS---STT------SC
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc---ccc------CC
Confidence 6789999998554 44567899999987532111001011112 5667888877654443220000 000 00
Q ss_pred CCCcEEEEeCCCCeEEeeecccCC--CccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHD--GAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+.|..+|. .++.+..+..... ...+.++++ .++++.++....+.|.++++..
T Consensus 258 ~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 258 VDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 0233455553 2443333321110 123566666 3666666666788899998754
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.71 E-value=0.017 Score=48.91 Aligned_cols=190 Identities=13% Similarity=-0.028 Sum_probs=109.1
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s 196 (344)
...+..++|++.++ ++.+-..++.|..++++... ........+.........+++.+.+ .++++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~--------------~~~~~~~~~~~~~~~p~glavd~~~~~ly~~ 94 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--------------GVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 94 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC--------------CCcccEEEEeCCCCCcCEEEEeecCCeEEEE
Confidence 45678999998654 55555567889999885310 0001111222222345788998744 45566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY-----------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~-----------------------~ 251 (344)
-..++.|.+.|+..... ..+. .........++++|.+..++.+... +.|..+ +
T Consensus 95 d~~~~~I~~~~~~g~~~-~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 95 DSVLGTVSVADTKGVKR-KTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp ETTTTEEEEEETTSSSE-EEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEE
T ss_pred ECCCCEEEEEeCCCCce-EEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEe
Confidence 66788999999875432 2121 1223456889999877766665532 455554 4
Q ss_pred CCCC-EEEEEeCCCcEEEEeCCCCeEEeeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 252 SDGR-IYCSGSKDGDIKIWDGVSSKCVATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 252 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+++. ++++-...+.|..+|...... ..+.. .........+++. .+..+++-...+.|..++..+|+.+..+..
T Consensus 173 ~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 173 LLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred ccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 3333 333334456777777753322 22211 1111235778885 455666666778899999888876666643
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.70 E-value=0.011 Score=48.36 Aligned_cols=167 Identities=8% Similarity=0.137 Sum_probs=98.8
Q ss_pred EecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE---
Q psy15157 174 TLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL--- 249 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--- 249 (344)
.+.+-...+..++|+|++. ++++...++.|...|.. ++....+...+ ....-.+++.+++.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4556667899999999766 55557778899999987 66555544322 234666777777766555433333333
Q ss_pred -----------------------------EcCCCCEEEEEeCCCcEEEEeCC---CCeEEeee-----cccCCCccEEEE
Q psy15157 250 -----------------------------YSSDGRIYCSGSKDGDIKIWDGV---SSKCVATF-----SKAHDGAEISSL 292 (344)
Q Consensus 250 -----------------------------~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-----~~~~~~~~v~~i 292 (344)
|++.+..|+++.......+|... ....+..+ ........+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 36667666666655554555443 11111111 111112347899
Q ss_pred EEccC-CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC-------cCceeeeeeeccCC
Q psy15157 293 TFTRN-GKYLLSSGKDSLVKLWELSSARCLIAYTGAGS-------MGQQFELTLTVDAD 343 (344)
Q Consensus 293 ~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 343 (344)
+++|. +++++.......|.++|.. |+.+..+.-..+ ..+-.-+++..++.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 99995 4555666677888999974 666666554321 23445555555543
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.65 E-value=0.02 Score=48.14 Aligned_cols=168 Identities=13% Similarity=0.096 Sum_probs=93.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
...+..+++.++|+++++..... .|..++..++.. ..+..+ ........++..+++..+++
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~----------------~~~~~~-~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV----------------ETLLTL-PDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE----------------EEEEEC-TTCSCEEEEEESSSSEEEEE
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE----------------EEEEeC-CCccccCcccccCCCcEEEE
Confidence 35688999999999766654332 465666543211 111111 11222345555555555555
Q ss_pred EeCCCcEEEEEcCCCccccc-----e---eeeccccceEEEEEecCCCEEEEEe-CCCEEEEE-----------------
Q psy15157 197 GSKDKTVKMFDYSKSSVRKA-----H---KTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------------- 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~-----~---~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------------- 250 (344)
-..++.|.++|...++.... . ...........+ ++++++++++. ..+.|..|
T Consensus 134 d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~ 211 (306)
T 2p4o_A 134 DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ 211 (306)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES
T ss_pred ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc
Confidence 55688899998765321000 0 000111223444 77777666654 33444444
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEe--eecccCCCccEEEEEEc---cCCCEEEEEeCCC
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVA--TFSKAHDGAEISSLTFT---RNGKYLLSSGKDS 308 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~i~~~---~~~~~l~s~~~dg 308 (344)
+++|+++++....+.|.++|.. ++... .+... ....++++|. |+++.|+.++..+
T Consensus 212 ~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 212 TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 5567777666667889999875 55422 33321 1358999998 8888877766543
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.65 E-value=0.0055 Score=54.52 Aligned_cols=158 Identities=9% Similarity=0.114 Sum_probs=84.7
Q ss_pred CceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 120 SPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
.....++|+++ +..|..+...+.|+.+|..++ .+..+........+++++++++++++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-------------------~v~~~~~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-------------------YVDIKTTNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-------------------EEEEECCCCSCEEEEEECTTCCEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC-------------------EEEEeecCCCCccEEEECCCCCEEEEc
Confidence 34678999984 334444444488999987532 233333345568899999999955554
Q ss_pred eCC---Cc-EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 198 SKD---KT-VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 198 ~~d---g~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
... .. +...+.. +..... ...........++++|. +|.++++-..++.|+.+|..+
T Consensus 200 ~~~~~~~~gv~~~~~~-~~~~~~-~~~~~~~~P~giavd~~------------------~G~lyv~d~~~~~V~~~d~~~ 259 (433)
T 4hw6_A 200 DQSSDTNTGIYLFTRA-SGFTER-LSLCNARGAKTCAVHPQ------------------NGKIYYTRYHHAMISSYDPAT 259 (433)
T ss_dssp CCSCTTSEEEEEECGG-GTTCCE-EEEEECSSBCCCEECTT------------------TCCEEECBTTCSEEEEECTTT
T ss_pred CCCCcccceEEEEECC-CCeecc-ccccccCCCCEEEEeCC------------------CCeEEEEECCCCEEEEEECCC
Confidence 321 11 3233322 111100 01111222344566662 233333334556677777766
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcC
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELS 316 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~ 316 (344)
+.....+........-..++|+|+|++|+.+ ...+.|+.+++.
T Consensus 260 g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 260 GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 6542222111111223579999999965554 556889998875
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.65 E-value=0.035 Score=53.23 Aligned_cols=192 Identities=14% Similarity=0.009 Sum_probs=105.9
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
....+..++|.+. +.++++-...+.|+.++++.... .......+.........|++.+.+. +++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~--------------~~~~~~vi~~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--------------VSSYDTVISRDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC--------------CcceeEEEecCCCCcceeeeeecCCcEEE
Confidence 3456678888874 44555555567788888753100 0111223333345567889987664 566
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEEcCC--------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLYSSD-------------------- 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~~~~-------------------- 253 (344)
+-...+.|.+.++..... ..+. .........|+++|.+.+|+..... +.|...+.+
T Consensus 488 tD~~~~~I~v~~ldG~~~-~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKR-KTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp EETTTTEEEEEETTSSSE-EEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred EecCCCeEEEEeCCCCeE-EEEE-eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 666778999999875432 2221 2233457889999987777666532 455554222
Q ss_pred ----CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 254 ----GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 254 ----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++++++=...+.|..+|+........+.....-....+|++. .++++++-...+.|...|..+|+.+..+..
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 223333333455666666433322222211111234566664 334455555678888888888876666643
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.61 E-value=0.024 Score=48.03 Aligned_cols=185 Identities=11% Similarity=0.039 Sum_probs=107.3
Q ss_pred CceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|.+. +.++.+-...+.|..++.+... .. ...+.........+++.+. +.++++-
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~----------------~~-~~~~~~~l~~p~glavd~~~g~ly~~d 97 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE----------------SV-QNVVVSGLLSPDGLACDWLGEKLYWTD 97 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS----------------CC-CEEEEECCSCCCEEEEETTTTEEEEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC----------------ce-EEEEcCCCCCccEEEEEcCCCeEEEEE
Confidence 35778999885 4555555567889888875320 00 0111112234567888874 4566666
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE-----------------------cC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY-----------------------SS 252 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~-----------------------~~ 252 (344)
...+.|.++++..... ..+. .........++++|.+.+++.+.. .+.|..+ ++
T Consensus 98 ~~~~~I~~~~~dG~~~-~~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~ 175 (318)
T 3sov_A 98 SETNRIEVSNLDGSLR-KVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 175 (318)
T ss_dssp TTTTEEEEEETTSCSC-EEEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred CCCCEEEEEECCCCcE-EEEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEec
Confidence 6678999999865422 2221 123345678899987666666552 3455544 44
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 253 DG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 253 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++ +++++=+..+.|..+|...... ..+.... .....++++. .+..+++-...+.|..++..+|+.+..+..
T Consensus 176 ~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 176 EEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGS-LPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC-EEEECSC-CSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred cCCEEEEEECCCCEEEEEcCCCCce-EEEecCC-CCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 33 3333334456677777653222 2222111 2346778775 345556666778899999988876666543
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.59 E-value=0.0016 Score=61.40 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=97.4
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC------CCcEE
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK------DKTVK 204 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~i~ 204 (344)
+..++.++.|+.|..+|..++............. .......++ .. ++ .++.+.. +|.|.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---------~~~~~~~P~----v~-~~-~v~vg~~~~~~~~~g~v~ 181 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK---------PYSITGAPR----VV-KG-KVIIGNGGAEYGVRGFVS 181 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS---------SCBCCSCCE----EE-TT-EEEECCBCTTTCCBCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC---------cceecCCCE----EE-CC-EEEEeCCCCCcCCCCEEE
Confidence 4577888889999999997765443221100000 000001111 11 33 4444432 58999
Q ss_pred EEEcCCCccccceeeeccc-----------------------------cceEEEEEecCCCEEEEEeCCCEEEEEc----
Q psy15157 205 MFDYSKSSVRKAHKTIQES-----------------------------TFVRCLSFHPCGDYMVVGTDHFVLRLYS---- 251 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~~~~i~~~~---- 251 (344)
.+|..+++....+...... .....++++|.+..+++++.++.. |.
T Consensus 182 a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~--w~~~~~ 259 (668)
T 1kv9_A 182 AYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSP--WNREVR 259 (668)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHH
T ss_pred EEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCc--cccCCC
Confidence 9999998876554421100 001134666666666655544321 11
Q ss_pred -C-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEccCCC---EEEEEeCCCcEEEEEcCCCe
Q psy15157 252 -S-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTRNGK---YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 -~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~~~~---~l~s~~~dg~i~vwd~~~~~ 319 (344)
+ .+..++ -+.|.-+|.++|+.+..+...++. .+.....+..+|+ .++.++.+|.++++|..+|+
T Consensus 260 ~~~~gd~l~----~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 260 SPGGGDNLY----LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp STTCCCCTT----TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCcee----eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 0 000000 125999999999988777543211 2233333344675 68999999999999999999
Q ss_pred eEEEeec
Q psy15157 320 CLIAYTG 326 (344)
Q Consensus 320 ~~~~~~~ 326 (344)
.+..++.
T Consensus 336 ~l~~~~~ 342 (668)
T 1kv9_A 336 LISAEKF 342 (668)
T ss_dssp EEEEEES
T ss_pred Eeccccc
Confidence 9866543
No 275
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.016 Score=52.13 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=67.6
Q ss_pred ceEEEEE-------CCCCCEEEEEeCCC-------eEEEEEcCC-ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEE
Q psy15157 121 PCRAGAF-------SIDGQLCATGSVDA-------SIKILDVDR-MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185 (344)
Q Consensus 121 ~v~~~~~-------s~~~~~l~sg~~dg-------~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 185 (344)
....++| +++|+.|+.+...+ .|.+++... +... .......+..+ .....+
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~----------~~~~~~~v~~~----~~p~gi 252 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFD----------DRSDIQLIAAY----KQCNGA 252 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCS----------TTSCEEEEEEE----SCCCCE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCcee----------ecccceeeccC----CCceEE
Confidence 5899999 99999666665543 255555321 0000 00000122222 133577
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEEcC-------CCcc-----------ccceeeeccccceEEEEEecCCCEEEEE-eCCC
Q psy15157 186 EFHPS-APILASGSKDKTVKMFDYS-------KSSV-----------RKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF 245 (344)
Q Consensus 186 ~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~ 245 (344)
+++|+ +.++++-..++.|..+|+. ++.. ...+...........++|+|+|++++++ +..+
T Consensus 253 avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h 332 (496)
T 3kya_A 253 TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH 332 (496)
T ss_dssp EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred EEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC
Confidence 88994 5566677778889999997 4443 0011112233456789999999965555 4556
Q ss_pred EEEEEcC
Q psy15157 246 VLRLYSS 252 (344)
Q Consensus 246 ~i~~~~~ 252 (344)
.|+.++.
T Consensus 333 ~I~kid~ 339 (496)
T 3kya_A 333 YFMRSDY 339 (496)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6666543
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.49 E-value=0.016 Score=51.48 Aligned_cols=176 Identities=11% Similarity=0.076 Sum_probs=96.8
Q ss_pred CceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 120 SPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
.....+++++ +|.++++-..++.|+.++..++... ..+... +....-..++|+|+++ ++++-
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~---------------~~~~~~-~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT---------------EEEVMM-DTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE---------------EEEEEC-SCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE---------------EEEecc-CCCCCcccEEEeCCCCEEEEEe
Confidence 4456788998 7777766666788888887532110 001111 1112234799999998 55555
Q ss_pred eCCCcEEEEEcCC--Cccccceeeec---------------cccceEEEEE---------ecCCCEEEEEeCCCEEEEEc
Q psy15157 198 SKDKTVKMFDYSK--SSVRKAHKTIQ---------------ESTFVRCLSF---------HPCGDYMVVGTDHFVLRLYS 251 (344)
Q Consensus 198 ~~dg~i~iwd~~~--~~~~~~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~~~~i~~~~ 251 (344)
...+.|+.++... +.......... .-.....+++ .++|.++++-..++.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 6678899988653 22110001000 0123566888 66666666666677788787
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeCCCcEEEEEcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++|.....++... ....+..-........-.....|+++ ++|.++++-..++.|+.+++.
T Consensus 372 ~~G~v~t~~G~g~-----~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 PEGRVTTYAGRGN-----SREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTSEEEEEECCCT-----TCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7775543333211 00001000000000001247889999 677766666677888888764
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.0092 Score=53.64 Aligned_cols=159 Identities=12% Similarity=0.116 Sum_probs=87.1
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-C---CcCCeEEEEE-------
Q psy15157 121 PCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-D---HIEEVTCLEF------- 187 (344)
Q Consensus 121 ~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---h~~~v~~~~~------- 187 (344)
....|+|+|. ++++++-...+.|++.|..+.. +.++. . .......++|
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-------------------v~~l~~~~~~~~~~p~~ia~~~~~~~~ 200 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-------------------LSSPLNINTIPTNRIRSIAFNKKIEGY 200 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-------------------EEEEECCTTSSCSBEEEEEECCCBTTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-------------------EEEEEccCccccCCCcEEEEeeccccc
Confidence 4678899983 4455555445678888876421 22221 1 2235889999
Q ss_pred cCCCCEEEEEeCCC-c------EEEEEcCC-Ccccc-c-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 188 HPSAPILASGSKDK-T------VKMFDYSK-SSVRK-A-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 188 ~~~~~~l~s~~~dg-~------i~iwd~~~-~~~~~-~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
++++..|+.+...+ . |.+.+... +.... . ............++++|++.. ++
T Consensus 201 d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~------------------LY 262 (496)
T 3kya_A 201 ADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGE------------------LY 262 (496)
T ss_dssp BCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCC------------------EE
T ss_pred CCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCe------------------EE
Confidence 99998666555543 2 56665333 12210 0 001111112344566664333 33
Q ss_pred EEEeCCCcEEEEeCC-------CCeE-----------EeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcC
Q psy15157 258 CSGSKDGDIKIWDGV-------SSKC-----------VATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELS 316 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~-------~~~~-----------~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~ 316 (344)
++-..++.|..+|+. ++.. ...+...........|+|+|+|++|+. -.....|+.++..
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 355566778888876 4432 111111112234689999999996544 4567788886653
No 278
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.45 E-value=0.09 Score=50.61 Aligned_cols=187 Identities=11% Similarity=0.100 Sum_probs=109.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...|.++...++|++|..|+.++-|.+||..++....... ... ......|.++...+++.+.+. +
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~--------~~~------~l~~~~v~~i~~d~~g~lwig-t 469 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQ--------RNS------QLVNENVYAILPDGEGNLWLG-T 469 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECT--------TTS------CCSCSCEEEEEECSSSCEEEE-E
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeec--------CCC------CcCCCeeEEEEECCCCCEEEE-e
Confidence 3568999988888856667777779999986432111000 000 023457899998888875554 4
Q ss_pred CCCcEEEEEcCCCccccceee----eccccceEEEEEecCCCEEEEEeCCCEEEE-------------------------
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPCGDYMVVGTDHFVLRL------------------------- 249 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~------------------------- 249 (344)
. +-+.+||..+++....... ......|.++..+++|...+.. ..|..++
T Consensus 470 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 547 (795)
T 4a2l_A 470 L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-EEGLSVFKQEGLDIQKASILPVSNVTKLFTNC 547 (795)
T ss_dssp S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-SSCEEEEEEETTEEEECCCSCSCGGGGSCEEE
T ss_pred c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-CCceEEEeCCCCeEEEecCCCCCCCCCCeeEE
Confidence 4 4588899877543221110 1123568888888887755543 3332221
Q ss_pred --EcCCCCEEEEEeCCCcEEEEeCCCCeEEeee-cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 250 --YSSDGRIYCSGSKDGDIKIWDGVSSKCVATF-SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 250 --~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+++|.+.+ |+.. -|..||..+++...-- ..+-....|.++..+++|++.+++ . +-|..||..+++ +..|..
T Consensus 548 i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~-~~~~~~ 622 (795)
T 4a2l_A 548 IYEASNGIIWV-GTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETEK-FRNFTE 622 (795)
T ss_dssp EEECTTSCEEE-EESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTE-EEEECG
T ss_pred EEECCCCCEEE-EeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCCc-EEEcCC
Confidence 134555444 4444 5788888776544311 111122458999999888865555 3 457888987765 345544
Q ss_pred C
Q psy15157 327 A 327 (344)
Q Consensus 327 ~ 327 (344)
.
T Consensus 623 ~ 623 (795)
T 4a2l_A 623 S 623 (795)
T ss_dssp G
T ss_pred c
Confidence 3
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.45 E-value=0.004 Score=58.65 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=35.1
Q ss_pred CCCCEEEEEeCC-----------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 252 SDGRIYCSGSKD-----------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 252 ~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
++|++++.|+.+ ..+.+||..+.+....-..........+..+.|+|+.++.||.
T Consensus 465 ~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 465 PDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 578888888754 4688999887664432111111112344566789999999885
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.34 E-value=0.062 Score=46.17 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=95.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
.+..+|.+..+++ +|+.+. ...|+..++.. ... ..+.........++|++... ++++-
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g------------------~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D 91 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHR------------------SEY-TLLLNNLENAIALDFHHRRELVFWSD 91 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTS------------------CCE-EEEECSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCC------------------Cee-EEeecCCCceEEEEEeccccEEEEEe
Confidence 3445566666644 343332 34577776642 111 22222334578999997655 55555
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE-----------------------cCC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~-----------------------~~~ 253 (344)
...+.|..+++.......... ........+++++.+..|+.+ ...+.|.+. +|.
T Consensus 92 ~~~~~I~r~~~~g~~~~~~~~--~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~ 169 (349)
T 3v64_C 92 VTLDRILRANLNGSNVEEVVS--TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM 169 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEEC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT
T ss_pred ccCCceEEEecCCCCceEEEe--CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC
Confidence 567889999987654322111 122335678888765555444 344555554 332
Q ss_pred -CCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy15157 254 -GRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSA 318 (344)
Q Consensus 254 -~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~ 318 (344)
|.++++-... +.|..+++........+. ......+.++++|++..|+.+ ...+.|..+|+...
T Consensus 170 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 170 EGTIYWTDWGNTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCeEEEeccCCCCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3333333333 556666654332222221 112357899999866666555 45678999998654
No 281
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.14 Score=49.25 Aligned_cols=181 Identities=14% Similarity=0.157 Sum_probs=105.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCCCCEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~ 195 (344)
...|.++...++|++.+ |+.++-+..++..+... ..+ ......|.++...+++.+.+
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-------------------~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF-------------------QIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE-------------------EECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE-------------------EEeccCCCCCCeEEEEEECCCCCEEE
Confidence 35688888887777555 55666688888753211 111 12345788998888776444
Q ss_pred EEeCCCcEEEEEcCCCccccceeee---ccccceEEEEEecCCCEEEEEeCCCEEEE---------E-------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTI---QESTFVRCLSFHPCGDYMVVGTDHFVLRL---------Y------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---------~------------- 250 (344)
|+. +-|..+|..+++........ .....|.++...++|...+.....|..++ +
T Consensus 466 -gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 466 -GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQ 543 (781)
T ss_dssp -EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEE
T ss_pred -EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEE
Confidence 455 56888998776532211100 01356889998888875554433443332 1
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEee-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++|.+. .|+.+|.|..||..+++...- ...+-....|.++..+++|++.++ +.+| |..||..+++ +..|.
T Consensus 544 i~~d~~g~lW-i~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~~~~~~~-~~~~~ 618 (781)
T 3v9f_A 544 IYRSSKGQMW-LATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCYITSKKC-FYTYD 618 (781)
T ss_dssp EEECTTSCEE-EEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEEETTTTE-EEEEC
T ss_pred EEECCCCCEE-EEECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEEECCCCc-eEEec
Confidence 2344444 344455548888776653221 111111235888999988876554 4455 7778886654 34454
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.09 Score=50.50 Aligned_cols=185 Identities=14% Similarity=0.121 Sum_probs=107.1
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...|.++...++|.+. .|+.++-|..|+..+....... .........|.++...+++.+.+ |+
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~---------------~~~~~~~~~v~~i~~d~~g~lWi-gt 424 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNK---------------ENRELLSNSVLCSLKDSEGNLWF-GT 424 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC--------------------CCCSBEEEEEECTTSCEEE-EE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEcc---------------CCCCCCCcceEEEEECCCCCEEE-Ee
Confidence 3568999988877754 4555556888887543211100 00012346789998888876554 67
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------------
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------------- 250 (344)
.++-|..+|..+++.............|.++...++|. +.+|+..|. ..|
T Consensus 425 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~~Gl-~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 425 YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTHAGV-FVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEETTEE-EEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEECCce-EEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 66778899987654322111011235688888887765 444554443 333
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++|.+. .|+.++-+..||..+++...... ..-....|.++..+++|++.++ +.+|.|..||..+++ +..|.
T Consensus 503 d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~-~~~~~ 575 (781)
T 3v9f_A 503 DSEGRFW-IGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFD-YQVFQ 575 (781)
T ss_dssp CTTCCEE-EEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCC-CEEEC
T ss_pred cCCCCEE-EEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCc-EEEcc
Confidence 2334433 45554457778877665433211 1111246899999988885554 447766889987765 34443
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.23 E-value=0.021 Score=54.69 Aligned_cols=161 Identities=10% Similarity=0.034 Sum_probs=80.9
Q ss_pred EEEEECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEEEE
Q psy15157 123 RAGAFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 196 (344)
..++|+|||+.|+....| ..|.++++.+... .....+. ........+.|+|++++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~----------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~ 287 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS----------------EDVCLYEEHNPLFSAFMYKAADTNTLCI 287 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG----------------GCEEEEECCCTTCEEEEEECTTSSEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch----------------hcEEEEecCCCceEEEEEECCCCCEEEE
Confidence 467899999887777665 2577777653210 1111221 22234568899999997765
Q ss_pred EeC---CCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 197 GSK---DKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 197 ~~~---dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.+. ...|.++|+.++.... ............++.|+. |+.|+..+... +.....|..+|+
T Consensus 288 ~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~--------------~a~~~~L~~~d~ 352 (751)
T 2xe4_A 288 GSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEG--------------GAVNHKLLIAPR 352 (751)
T ss_dssp EEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTT--------------TCTTCEEEEEET
T ss_pred EecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCC--------------CCCCcEEEEEcC
Confidence 542 3458888887652111 111111223334444432 44443322110 012235666776
Q ss_pred CCCeEEee-ecccCCCccEEEEEEccCCCEEEEEeCCCc--EEEEEc
Q psy15157 272 VSSKCVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSL--VKLWEL 315 (344)
Q Consensus 272 ~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~--i~vwd~ 315 (344)
.++..... +........+..+.+. .+.++++...++. |+++|+
T Consensus 353 ~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 64211112 2212222245666665 3345566677776 555665
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.10 E-value=0.11 Score=48.11 Aligned_cols=63 Identities=13% Similarity=0.084 Sum_probs=45.0
Q ss_pred CcEEEEeCCCCeEEeeecccCCCc-------cEEEEEEc-cCC---CEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGA-------EISSLTFT-RNG---KYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~-------~v~~i~~~-~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+.|.-+|.++|+.+..+...++.. ...-+... .+| +.++.++.+|.++++|.++|+.+..++.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 379999999999887776443211 11112222 467 5678889999999999999999987763
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.09 E-value=0.13 Score=45.10 Aligned_cols=141 Identities=8% Similarity=-0.040 Sum_probs=78.3
Q ss_pred CcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCC
Q psy15157 178 HIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSD 253 (344)
Q Consensus 178 h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~ 253 (344)
....+..++|++... ++++-...+.|+.+++..... ...............+++++.+..|+.+ ...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 456788999998655 555555678899999865220 0111111133456788888855555444 445666665333
Q ss_pred C-----------------------CEEEEEe-C-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 254 G-----------------------RIYCSGS-K-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 254 ~-----------------------~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
| ..|+... . .+.|...++........+. . .-...+.|++++++..|+.+ ...
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-~-~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E-NIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-S-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-C-CCCceEEEEEEeCCCEEEEEECCC
Confidence 3 2222222 1 2455555554332222221 1 11357899999877776665 456
Q ss_pred CcEEEEEcCCCee
Q psy15157 308 SLVKLWELSSARC 320 (344)
Q Consensus 308 g~i~vwd~~~~~~ 320 (344)
+.|..+|+.....
T Consensus 268 ~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 268 HSISSIDVNGGNR 280 (400)
T ss_dssp TEEEEEETTSCCC
T ss_pred CEEEEEeCCCCcc
Confidence 7899999865443
No 286
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.08 E-value=0.1 Score=45.66 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=70.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc------------ceeeec----cccceEEEEEecCCCEEEEEeCC
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK------------AHKTIQ----ESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
.|..+..+|+|.+|+..+ +..|.|-.+..+.... .+.... ...+|..+.|||-+
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~--------- 136 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKS--------- 136 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTB---------
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEecccc---------
Confidence 577899999999998876 4689998887432111 111100 13568888888853
Q ss_pred CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEeeeccc-------CCCccEEEEEEccCCCEEEEEe--CCCcEEE
Q psy15157 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK--CVATFSKA-------HDGAEISSLTFTRNGKYLLSSG--KDSLVKL 312 (344)
Q Consensus 245 ~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~-------~~~~~v~~i~~~~~~~~l~s~~--~dg~i~v 312 (344)
..+..|++-..|+.|++||+.... +. .+... .....|.+++|..++-.|...+ +.|.|+-
T Consensus 137 -------~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 137 -------YRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp -------GGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred -------CCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 255667778888889999887521 11 22111 1113588999988665555533 5666554
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.03 E-value=0.13 Score=48.04 Aligned_cols=186 Identities=12% Similarity=0.034 Sum_probs=104.3
Q ss_pred CCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
.-..+..++|++.+..+..+. ..+.|..++++.. ......+..-......+++.+.+. +++
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~-----------------~~~~~v~~~~~~~P~GlAvD~~~~~ly~ 100 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT-----------------ESVQNVVVSGLLSPDGLACDWLGEKLYW 100 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC-----------------CceEEEEeCCCCCcCeEEEEecCCEEEE
Confidence 344678999998666555444 4677888887521 001122233335688999998555 556
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE-----------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY----------------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~----------------------- 250 (344)
+-...+.|.+.++..... ..+. .........++++|.+.+|+.... .+.|...
T Consensus 101 ~d~~~~~I~v~~~dG~~~-~~l~-~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glal 178 (619)
T 3s94_A 101 TDSETNRIEVSNLDGSLR-KVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL 178 (619)
T ss_dssp EETTTTEEEEEETTSCSC-EEEE-CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EeCCCCEEEEEECCCCCE-EEEE-eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEE
Confidence 666778999999875432 2221 123344677899998776666553 2344433
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++ ++++++-...+.|..+|........... ... ....++++..+ ...++-...+.|...|..+|+....+.
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~-~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSL-PHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred EccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCC-CCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 332 3333333444567777765433222221 111 12356777655 445555577889999998887655544
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.97 E-value=0.14 Score=43.45 Aligned_cols=157 Identities=10% Similarity=0.056 Sum_probs=82.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
++...+..+++.+++.+++.+...+..+-+|-. ...+..+. ......+..+.+.+++.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g----------------G~tW~~~~--~~~~~~~~~~~~~~~g~~~~- 220 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG----------------QTAWEPHN--RTTSRRLHNMGFTPDGRLWM- 220 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT----------------CSSCEEEE--CCSSSCEEEEEECTTSCEEE-
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC----------------CCceeECC--CCCCCccceeEECCCCCEEE-
Confidence 455678889999888888776544333333320 01122221 23456788899999887554
Q ss_pred EeCCCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++.+|.+++.+...++.-...... .....+.++.+.+++..++++ .+|.| ++....+
T Consensus 221 ~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g--------------------~~g~i-~~S~DgG 279 (327)
T 2xbg_A 221 IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG--------------------GAGAL-LCSQDGG 279 (327)
T ss_dssp EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE--------------------STTCE-EEESSTT
T ss_pred EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe--------------------CCCeE-EEeCCCC
Confidence 556788877643223211111111 122347778887765555433 23433 2222222
Q ss_pred eEEeeeccc-CCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 275 KCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 275 ~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+.-..+... .....+.++.|.++++ +++++.+|.|.-++
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 211122111 0112467888875554 66667788776665
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.95 E-value=0.27 Score=47.19 Aligned_cols=158 Identities=9% Similarity=-0.004 Sum_probs=84.5
Q ss_pred CcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEc--
Q psy15157 178 HIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYS-- 251 (344)
Q Consensus 178 h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~-- 251 (344)
....+..|+|++... ++++-...+.|+.+++..... ...............|++++.+..|+.+. ..+.|.+.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345678999998544 556666678899999875321 01111111233456788888776665543 455665553
Q ss_pred ---------------------CC-CCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 252 ---------------------SD-GRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 252 ---------------------~~-~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
|. |.++++-... +.|...++........+. . .....+.|++++.+..|+.+ ...
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~-~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E-NIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-S-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-C-CCCCceEEEEecCCCeEEEEeCCC
Confidence 33 2233332222 456666654333222222 1 12358899999766666655 456
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcCceeeee
Q psy15157 308 SLVKLWELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
+.|...++........+.........+.+.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEE
Confidence 779999986554444443333333333333
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.94 E-value=0.046 Score=47.75 Aligned_cols=123 Identities=16% Similarity=0.071 Sum_probs=80.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------CcCCeEEEEEcCC---C
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------HIEEVTCLEFHPS---A 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~---~ 191 (344)
.|..+..||+|++||..+ +..|.|-.+.......... .. ...-..+.+.- ...+|..+.|||- +
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~---~~---~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~d 139 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV---SI---QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRD 139 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH---HH---HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGG
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc---cc---ccccceeEEEcCCcccCCCCceeEEEeccccCCC
Confidence 678899999999999986 4579999986321111000 00 00011122221 3578999999994 4
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccc--------eeeeccccceEEEEEecCCCEEEEEe--CCCEEEEE
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKA--------HKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRLY 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~ 250 (344)
..|++-..|+.|++||+........ +........+.+++|..++-.|++.+ ..|-|.-.
T Consensus 140 s~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 140 SCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 5899999999999999986321111 11111225688999999888888866 77877764
No 291
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.94 E-value=0.17 Score=44.02 Aligned_cols=136 Identities=13% Similarity=0.056 Sum_probs=77.4
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE------
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY------ 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~------ 250 (344)
......++|++.+. ++++-...+.|..+++.......... ........+++++.+..|+.. ...+.|.+.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~--~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS--TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC--SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe--CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc
Confidence 34578999997555 55565667889999987654222111 112234567888765555444 344555554
Q ss_pred -----------------cCCCC-EEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcE
Q psy15157 251 -----------------SSDGR-IYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLV 310 (344)
Q Consensus 251 -----------------~~~~~-~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i 310 (344)
+|.+. ++++-... +.|..+++.......... . .....+.|+|+|++..|+.+ +..+.|
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~-~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-T-HLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-S-SCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-C-CCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 33333 33333333 556666654332222221 1 12347899999866666554 556789
Q ss_pred EEEEcCCC
Q psy15157 311 KLWELSSA 318 (344)
Q Consensus 311 ~vwd~~~~ 318 (344)
..+|+...
T Consensus 271 ~~~d~dG~ 278 (386)
T 3v65_B 271 ERANLDGS 278 (386)
T ss_dssp EEECTTSC
T ss_pred EEEeCCCC
Confidence 99998654
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.93 E-value=0.097 Score=43.63 Aligned_cols=172 Identities=13% Similarity=0.136 Sum_probs=88.1
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----
Q psy15157 130 DGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD---- 200 (344)
Q Consensus 130 ~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---- 200 (344)
++.+++.|+.+ ..+.+||..+... ..+..+..+.........+.. ++.+++.|+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~-------------~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 126 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADED-------------GVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRR 126 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTT-------------CCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCB
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCC-------------CeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcc
Confidence 57788888765 3588888764210 001112111111111222222 56677777654
Q ss_pred -CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEEc-----------------------
Q psy15157 201 -KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLYS----------------------- 251 (344)
Q Consensus 201 -g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~~----------------------- 251 (344)
..+.+||..+.+...............++.+ ++..++.|+.+ ..+..|+
T Consensus 127 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred cceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence 3588899877654332211111111122222 56666666543 2344442
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 252 SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 252 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
.++.+++.|+.+ ..+.+||..+.+....-..........++.+ +++.++.|+.+ ..|.+||+.+.+-
T Consensus 205 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 205 LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 245667777664 4689999988764432211111111223333 67777888765 3578999987654
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.88 E-value=0.18 Score=43.30 Aligned_cols=107 Identities=18% Similarity=0.122 Sum_probs=61.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCC-
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPS- 190 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~- 190 (344)
+...-...+.++|.|+|+++++ ..+|.|++++ .. .. ..+..+ .........|+|+|+
T Consensus 26 va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g-~~----------------~~~~~~~v~~~g~~~p~gia~~pdf 86 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR-EG-RL----------------STYAELSVYHRGESGLLGLALHPRF 86 (352)
T ss_dssp EECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE-TT-EE----------------EEEEECCCCCSTTCSEEEEEECTTT
T ss_pred EECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE-CC-Cc----------------cEeecceEeecCCCCceeEEECCCC
Confidence 3333456789999999996655 5669999998 31 10 111111 122356789999998
Q ss_pred --CC-EEEEEeCC-----CcEEEEEcCCCccc---cceeeec----cccceEEEEEecCCCEEEE
Q psy15157 191 --AP-ILASGSKD-----KTVKMFDYSKSSVR---KAHKTIQ----ESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 191 --~~-~l~s~~~d-----g~i~iwd~~~~~~~---~~~~~~~----~~~~v~~~~~~~~~~~l~~ 240 (344)
+. ++++-..+ +.|..|+....... ..+.... .......++|.|+|.++++
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 44 44444432 67888887643211 1111111 1123467999999965554
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.80 E-value=0.0076 Score=57.14 Aligned_cols=166 Identities=9% Similarity=-0.019 Sum_probs=89.1
Q ss_pred eEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeC
Q psy15157 122 CRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSK 199 (344)
Q Consensus 122 v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 199 (344)
...|++.+ .++++++-...+.|.+++++.. .....+.........+++.|.+. ++++-..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~------------------~~~~l~~~~~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGV------------------KRKTLFREQGSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSC------------------CEEEECCCSSCCCCCEECCSSSSCCEECCCS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCC------------------ceEEEEeCCCCCcceEEEccCCCcEEEcccC
Confidence 45677774 4455555455677888887521 11111222223456788888654 4444322
Q ss_pred C-CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 200 D-KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 200 d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
. +.|..+++..... ..+. .........|+|+|++..|+++ -...+.|..+|+.......
T Consensus 517 ~~~~I~~~~~dG~~~-~~l~-~~~l~~PnGlavd~~~~~LY~a------------------D~~~~~I~~~d~dG~~~~~ 576 (699)
T 1n7d_A 517 TPAKIKKGGLNGVDI-YSLV-TENIQWPNGITLDLLSGRLYWV------------------DSKLHSISSIDVNGGNRKT 576 (699)
T ss_dssp SSCCEEBCCSSSCCC-CEES-CSSCSSCCCEEECTTTCCEEEE------------------ETTTTEEEEECSSSSCCEE
T ss_pred CCCeEEEEeCCCCCe-eEEE-eCCCCCccEEEEeccCCEEEEE------------------ecCCCeEEEEccCCCceEE
Confidence 2 6788877754321 1111 1122345668898876555543 3344556666664322221
Q ss_pred eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+..........+|++..+ .++++....+.|..++..+|+.+..+..
T Consensus 577 ~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 577 ILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp ECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 1111111112345666543 4555666778999999989988877754
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.68 E-value=0.22 Score=41.56 Aligned_cols=169 Identities=10% Similarity=0.124 Sum_probs=87.6
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC-----
Q psy15157 130 DGQLCATGSVD----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----- 200 (344)
Q Consensus 130 ~~~~l~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----- 200 (344)
++.+++.|+.+ ..+.+||..+.. +..+..+.........+.+ ++.+++.|+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 116 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDS----------------WYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSA 116 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTE----------------EEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCe----------------EEECCCCCccccceeEEEE--CCEEEEECCCCCCCcE
Confidence 57788888765 567788876421 1122222111111222222 56677777765
Q ss_pred -CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC---------CCEEEEEc-------------------
Q psy15157 201 -KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD---------HFVLRLYS------------------- 251 (344)
Q Consensus 201 -g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~i~~~~------------------- 251 (344)
..+.+||..+.+...............++.+ ++..++.|+. ...+..|+
T Consensus 117 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 194 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH 194 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred eeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc
Confidence 4588999887654322111111111122222 5555555542 22344441
Q ss_pred ----CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCC
Q psy15157 252 ----SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSS 317 (344)
Q Consensus 252 ----~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~ 317 (344)
.++++++.|+.+ ..+.+||..+.+-...-..........++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 195 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 195 GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 245666666654 3588899887754332111111112233333 67788888754 4689999988
Q ss_pred Cee
Q psy15157 318 ARC 320 (344)
Q Consensus 318 ~~~ 320 (344)
.+-
T Consensus 273 ~~W 275 (306)
T 3ii7_A 273 DKW 275 (306)
T ss_dssp TEE
T ss_pred CeE
Confidence 754
No 296
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.63 E-value=0.051 Score=50.16 Aligned_cols=64 Identities=13% Similarity=0.039 Sum_probs=44.2
Q ss_pred CcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEccCCC---EEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTRNGK---YLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~~~~---~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.|..+|.++++.+..+...++. ....-+....+|+ .++.++.+|.++++|..+|+.+..++..
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 36899999999988776532210 1111223334774 6778899999999999999998887643
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.62 E-value=0.35 Score=43.12 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=62.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------CCcCCeEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------DHIEEVTC 184 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~ 184 (344)
+...+...-...+.|+|.|+|+++++-...+.|++++..++.. ..+..+. ...+....
T Consensus 18 ~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~----------------~~~~~~~~~~~~~~g~~Gllg 81 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSV----------------KTVFQVPEIVNDADGQNGLLG 81 (454)
T ss_dssp CEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----------------EEEEECTTCCCCTTSSCSEEE
T ss_pred EEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE----------------eEEecCCccccccCCCCceeE
Confidence 3333433345678999999999887765445788887532211 1111221 12456789
Q ss_pred EEEcCC----CCEEEEEeC------------CCcEEEEEcCCCc--c---ccceeee--ccccceEEEEEecCCCEEEEE
Q psy15157 185 LEFHPS----APILASGSK------------DKTVKMFDYSKSS--V---RKAHKTI--QESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 185 ~~~~~~----~~~l~s~~~------------dg~i~iwd~~~~~--~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 241 (344)
|+|+|+ +.+.++-+. ...|.-|++.... . ...+... ........|.|.|+|.+.++.
T Consensus 82 ia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 82 FAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp EEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred EEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 999995 444444432 2345556554321 1 1111111 112346788999988765553
Q ss_pred e
Q psy15157 242 T 242 (344)
Q Consensus 242 ~ 242 (344)
+
T Consensus 162 G 162 (454)
T 1cru_A 162 G 162 (454)
T ss_dssp C
T ss_pred C
Confidence 3
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.62 E-value=0.29 Score=42.06 Aligned_cols=211 Identities=14% Similarity=0.095 Sum_probs=110.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~ 189 (344)
..+..--...+.++|.|+|+++++ ..+|.|++++.. +. ..+..+ .........|+++|
T Consensus 22 ~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~-----------------~~~~~~~v~~~g~~g~~gia~~p 82 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLISPS-GK-----------------KLVASFDVANVGEAGLLGLALHP 82 (354)
T ss_dssp EEEECSCSCEEEEEEEETTEEEEE-ETTTEEEEECSS-CE-----------------EEEEECCCCCSTTCSEEEEEECT
T ss_pred EEEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC-Cc-----------------eEeeccceeecCCCceeeEEeCC
Confidence 333333456889999999986555 566999988632 11 111111 11234678999999
Q ss_pred C----CCEEEEEeC---C----CcEEEEEcCCC--cc---cccee-ee-ccccceEEEEEecCCCEEEEEeC--------
Q psy15157 190 S----APILASGSK---D----KTVKMFDYSKS--SV---RKAHK-TI-QESTFVRCLSFHPCGDYMVVGTD-------- 243 (344)
Q Consensus 190 ~----~~~l~s~~~---d----g~i~iwd~~~~--~~---~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~-------- 243 (344)
+ +.++++-+. + +.|..|+.... .. ...+. .. ........+.|.|+|.++++.+.
T Consensus 83 df~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~ 162 (354)
T 3a9g_A 83 EFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQ 162 (354)
T ss_dssp TTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGT
T ss_pred CCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcccc
Confidence 7 444444332 3 56777776653 11 11111 11 11123466899999976555321
Q ss_pred -----CCEEEEEcCCCC-----------EEEEEeC----------CCcEEEEeCCCC--eEEeeecc-------------
Q psy15157 244 -----HFVLRLYSSDGR-----------IYCSGSK----------DGDIKIWDGVSS--KCVATFSK------------- 282 (344)
Q Consensus 244 -----~~~i~~~~~~~~-----------~l~~~~~----------dg~i~iwd~~~~--~~~~~~~~------------- 282 (344)
.+.|.-++++|. .++.|-. +|.+.+=|.... ..+..+..
T Consensus 163 d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~ 242 (354)
T 3a9g_A 163 DLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKA 242 (354)
T ss_dssp CTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCC
T ss_pred CCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCC
Confidence 256666666664 3333222 455554443221 11111100
Q ss_pred -----------c-CCCccEEEEEE-------ccCCCEEEEEeCCCcEEEEEcCCC-eeE--EEeecCCCcCceeeeeeec
Q psy15157 283 -----------A-HDGAEISSLTF-------TRNGKYLLSSGKDSLVKLWELSSA-RCL--IAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 283 -----------~-~~~~~v~~i~~-------~~~~~~l~s~~~dg~i~vwd~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 340 (344)
. +.......++| ..+|+++++.-..+.|...++... +.. ..+.. +...+...+.+.+
T Consensus 243 ~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~p 321 (354)
T 3a9g_A 243 GRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDD 321 (354)
T ss_dssp CCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECT
T ss_pred CCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECC
Confidence 0 11124678888 356777777667778888888753 322 22321 1234555666666
Q ss_pred cCC
Q psy15157 341 DAD 343 (344)
Q Consensus 341 ~~~ 343 (344)
|+.
T Consensus 322 DG~ 324 (354)
T 3a9g_A 322 DGG 324 (354)
T ss_dssp TSC
T ss_pred CCc
Confidence 653
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.60 E-value=0.27 Score=41.62 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=64.9
Q ss_pred CCcCCeEEEEEcCCCCEEEEEeCCCcEEE-EEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 177 DHIEEVTCLEFHPSAPILASGSKDKTVKM-FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 177 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.+...+..+.+.+++.+++.+. +|.+.. +|-. +..-.... ......+..+.+.+++..+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g-G~tW~~~~-~~~~~~~~~~~~~~~g~~~~~--------------- 221 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG-QTAWEPHN-RTTSRRLHNMGFTPDGRLWMI--------------- 221 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTT-CSSCEEEE-CCSSSCEEEEEECTTSCEEEE---------------
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC-CCceeECC-CCCCCccceeEECCCCCEEEE---------------
Confidence 4456788999999888776654 454443 3321 22111121 123445777778776654432
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeeccc--CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKA--HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+|.+++.+...++.-..+... .....+.++.+.+++..++++. +|.| ++....|+.-..+.
T Consensus 222 -----~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 222 -----VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp -----ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECG
T ss_pred -----eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcC
Confidence 33444544432222222222111 1112488899998887666654 6766 44555555444443
No 300
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.60 E-value=0.27 Score=41.52 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=76.3
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCCC----
Q psy15157 181 EVTCLEFHPSA-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDG---- 254 (344)
Q Consensus 181 ~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~~---- 254 (344)
....++|++.+ .++++-...+.|..+++.......... .........+++++.+..|+.+ ...+.|.+++++|
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 46789999854 455666667889999987653211111 1122345678888755555444 3455666653333
Q ss_pred -------------------CEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEE
Q psy15157 255 -------------------RIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKL 312 (344)
Q Consensus 255 -------------------~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~v 312 (344)
..++... ..+.|..+++..... ..+... .-...+.+++++++..|+.+ +..+.|..
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~-~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINS-EIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEEC-CCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 2222222 235566665542221 122111 11347899999966666554 56778999
Q ss_pred EEcCCC
Q psy15157 313 WELSSA 318 (344)
Q Consensus 313 wd~~~~ 318 (344)
+|+...
T Consensus 193 ~d~dG~ 198 (318)
T 3sov_A 193 SNLDGT 198 (318)
T ss_dssp EETTSC
T ss_pred EcCCCC
Confidence 998643
No 301
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.55 E-value=0.11 Score=43.28 Aligned_cols=56 Identities=11% Similarity=0.192 Sum_probs=32.4
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCeeE
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-----LVKLWELSSARCL 321 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~ 321 (344)
..+.+||..+.+....-...........+.+ +++.++.|+.++ .+.+||+.+.+-.
T Consensus 220 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 4688999887754432211111111122222 677778887654 4899999887643
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.45 E-value=0.011 Score=56.16 Aligned_cols=164 Identities=12% Similarity=-0.003 Sum_probs=85.2
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|++.+..|+.+ ...+.|+.+++...... ......+.........|++.+. +.++++-
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~--------------~~~~~~i~~~~~~P~glavD~~~g~LY~tD 471 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--------------SSYDTVISRDIQAPDGLAVDWIHSNIYWTD 471 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC---------------CCCCCBCCSCC--CCCEECCCSSSBCEECC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC--------------cceEEEEeCCCCCcceEEEEeeCCcEEEEe
Confidence 456788998866555544 45578888887631000 0000011111123456777754 4455655
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
...+.|.++++........+. ........++++|.+.+|+.+.. +..+.|..+++.....
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~--~~~~~P~giavDp~~g~ly~td~-----------------~~~~~I~~~~~dG~~~- 531 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFR--EQGSKPRAIVVDPVHGFMYWTDW-----------------GTPAKIKKGGLNGVDI- 531 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECC--CSSCCCCCEECCSSSSCCEECCC-----------------SSSCCEEBCCSSSCCC-
T ss_pred ccCCeEEEEecCCCceEEEEe--CCCCCcceEEEccCCCcEEEccc-----------------CCCCeEEEEeCCCCCe-
Confidence 567889999987543221111 11233456778876554443221 1125566666543221
Q ss_pred eeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSA 318 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~ 318 (344)
..+... .....+.|+|+|++..| ++-+..+.|.++++...
T Consensus 532 ~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 532 YSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 111111 11246789999875544 44456678999998643
No 303
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.45 E-value=0.33 Score=40.84 Aligned_cols=136 Identities=9% Similarity=-0.020 Sum_probs=75.9
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC---ccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE---
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKS---SVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY--- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~--- 250 (344)
......++|++.+. ++++-..++.|..+++... ...... ..........+++++.+..|+.+ ...+.|.++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE-EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 45678999998655 5566666789999998761 111111 11122345678888765555544 445555555
Q ss_pred --------------------cCCCCE-EEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 251 --------------------SSDGRI-YCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 251 --------------------~~~~~~-l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
+|.+.. +++.... +.|..+++.... ...+... .....+.+++++++..|+.+ +..
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTE-NIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECS-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEEC-CCCCceEEEEeccCCEEEEEECCC
Confidence 333333 3332222 566666654322 2222111 12357899999877766555 456
Q ss_pred CcEEEEEcCC
Q psy15157 308 SLVKLWELSS 317 (344)
Q Consensus 308 g~i~vwd~~~ 317 (344)
+.|..+|+..
T Consensus 186 ~~I~~~d~dg 195 (316)
T 1ijq_A 186 HSISSIDVNG 195 (316)
T ss_dssp TEEEEEETTS
T ss_pred CeEEEEecCC
Confidence 7899999964
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.43 E-value=0.22 Score=46.09 Aligned_cols=64 Identities=9% Similarity=0.108 Sum_probs=46.3
Q ss_pred CcEEEEeCCCCeEEeeecccCCC--------ccEEEEEEc-cCCC---EEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDG--------AEISSLTFT-RNGK---YLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~i~~~-~~~~---~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+.|.-+|..+|+.+-.+...++. .++. +... .+|+ .++.++.+|.++++|..+|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 366 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVD 366 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccccc
Confidence 67999999999988776533221 1121 2222 4674 78889999999999999999998877643
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.37 E-value=0.65 Score=43.30 Aligned_cols=184 Identities=8% Similarity=-0.005 Sum_probs=108.3
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 196 (344)
-..+..++|++.+. ++.+-..++.|..++++.. .....+..-......+++.+.+. ++++
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~------------------~~~~v~~~g~~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS------------------ALEHVVEFGLDYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC------------------CcEEEEeCCCCCcceEEEEeCCCEEEEE
Confidence 34678999998555 4555556788988887531 11112222224566888887554 5566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE----------------------cC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY----------------------SS 252 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~----------------------~~ 252 (344)
-...+.|.+.++..... ..+. .........++++|...+|+.... .+.|... ++
T Consensus 98 D~~~~~I~v~~~dG~~~-~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~ 175 (628)
T 4a0p_A 98 DTGTNRIEVSKLDGQHR-QVLV-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDY 175 (628)
T ss_dssp ETTTTEEEEEETTSTTC-EEEE-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEET
T ss_pred ECCCCEEEEEecCCCcE-EEEE-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEcc
Confidence 56678899999865432 2221 123345688999997667766652 3444443 34
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 253 DG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 253 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++ +++++-...+.|..+|+..... ..+... . ....++++.. +..+++-...+.|...|..+|+....+..
T Consensus 176 ~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~-l-~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 176 AKRRLYWTDLDTNLIESSNMLGLNR-EVIADD-L-PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC-EEEEEC-C-SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred ccCEEEEEECCCCEEEEEcCCCCce-EEeecc-C-CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 33 3333434456777777754332 222211 1 2356787764 45555555688899999888876655543
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.35 E-value=0.42 Score=40.98 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=60.2
Q ss_pred ceeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
+...+...-...+.|+|.|+|+ +++ +...|.|++++.+.... .... . .. ............++++|
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~-~~~~------~---~~--~v~~~g~~g~~gia~~p 75 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLS-APLS------G---VP--DVWAHGQGGLLDVVLAP 75 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETTTEEC-CCCB------S---CC--CCCCSTTCSEEEEEECT
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCcee-eEec------C---Cc--ccccCCCCCceeEEECC
Confidence 3333333345678999999999 555 45679999998542110 0000 0 00 01112234568999999
Q ss_pred C----CCEEEEEeC-------CCcEEEEEcCCCc--c--ccc-eeeec----cccceEEEEEecCCCEEEE
Q psy15157 190 S----APILASGSK-------DKTVKMFDYSKSS--V--RKA-HKTIQ----ESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 190 ~----~~~l~s~~~-------dg~i~iwd~~~~~--~--~~~-~~~~~----~~~~v~~~~~~~~~~~l~~ 240 (344)
+ +.++++-+. ...|..|++.... . ... +.... .......+.|.|+|.++++
T Consensus 76 df~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 76 DFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp THHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred CCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 5 444444332 2356666664321 1 111 11111 1122456999999954444
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.17 E-value=0.53 Score=40.34 Aligned_cols=140 Identities=11% Similarity=0.142 Sum_probs=78.7
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCcc-ccceeeec-----cccceEEEEEec-
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGS------------KDKTVKMFDYSKSSV-RKAHKTIQ-----ESTFVRCLSFHP- 233 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~-~~~~~~~~-----~~~~v~~~~~~~- 233 (344)
..+.+-.....++...|+|..+++++ .+|.|.++|..+... ...+.... .......+.+.+
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp EECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC
T ss_pred EEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC
Confidence 33444233455777888876666552 689999999874321 12222221 122455566655
Q ss_pred -CCC-EEEEEeC---CCEEEEE----------------------------cCCCCEEEEEe-----------------CC
Q psy15157 234 -CGD-YMVVGTD---HFVLRLY----------------------------SSDGRIYCSGS-----------------KD 263 (344)
Q Consensus 234 -~~~-~l~~~~~---~~~i~~~----------------------------~~~~~~l~~~~-----------------~d 263 (344)
++. +|+++.. +..+.+| +++|.++++.. ..
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 343 4555432 3455554 55676666543 12
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~ 317 (344)
|.|.-+|.. +...... .- ...+.++|+||++.|+.+. ..+.|+.|++..
T Consensus 203 g~vyr~d~~--~~~~~~~-~l--~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN--DVRVVAE-GF--DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT--CCEEEEE-EE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEECC--eEEEeec-CC--cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 445555543 2221121 11 2478999999998877664 578899999864
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.12 E-value=0.27 Score=40.87 Aligned_cols=55 Identities=7% Similarity=0.153 Sum_probs=31.4
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
..+.+||..+.+....-...........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 4588999887754432111111111222333 57777777764 3689999987654
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.84 E-value=0.31 Score=41.61 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=43.3
Q ss_pred EecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee----eccccceEEEEEecC---CCEEEE
Q psy15157 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPC---GDYMVV 240 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~ 240 (344)
.+...-..-+.|+|.|++.++++--..|.|++++..++........ .........|+++|+ +.+|++
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 3444455678999999999877765589999998655543211111 123456788999995 445544
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.83 E-value=0.29 Score=40.88 Aligned_cols=56 Identities=11% Similarity=0.180 Sum_probs=32.3
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCeeE
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARCL 321 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~ 321 (344)
..+.+||..+.+....-...........+.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 231 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 231 NSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 5689999888765432211111111222233 67777887754 45889999887643
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.73 E-value=0.85 Score=39.07 Aligned_cols=171 Identities=11% Similarity=0.093 Sum_probs=94.2
Q ss_pred CceEEEEECCCCCEEEEE------------eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE----ecCCcCCeE
Q psy15157 120 SPCRAGAFSIDGQLCATG------------SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT----LYDHIEEVT 183 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~ 183 (344)
...-+++..++|..++++ ..+|.|.++|.++... ....+.. +........
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~--------------~~~~l~~~g~~~~~~~f~Ph 115 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP--------------AVSELEIIGNTLDISSFNPH 115 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC--------------CEEECEEECSSCCGGGCCEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC--------------ceEEEEccCCCCCcCceeee
Confidence 355667778877655554 2689999999863100 0001111 111233556
Q ss_pred EEEEcC--CCC-EEEEEe-C--CCcEEEEEcCCCccc-cceeeec--cccceEEEEEecCCCEEEEEe------------
Q psy15157 184 CLEFHP--SAP-ILASGS-K--DKTVKMFDYSKSSVR-KAHKTIQ--ESTFVRCLSFHPCGDYMVVGT------------ 242 (344)
Q Consensus 184 ~~~~~~--~~~-~l~s~~-~--dg~i~iwd~~~~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------------ 242 (344)
.+.+.+ ++. .|+.+. . +.+|.+|++...... ....... .-...+.+.+.++|.+.++..
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e 195 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWE 195 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccch
Confidence 666655 344 344442 2 467888887654221 1111111 223567888888887665543
Q ss_pred -----CCCEEEE--------------------EcCCCCEEEEEe-CCCcEEEEeCCC-CeE--EeeecccCCCccEEEEE
Q psy15157 243 -----DHFVLRL--------------------YSSDGRIYCSGS-KDGDIKIWDGVS-SKC--VATFSKAHDGAEISSLT 293 (344)
Q Consensus 243 -----~~~~i~~--------------------~~~~~~~l~~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~~~v~~i~ 293 (344)
..+.+.. |+|+++.++.+. ..+.|..|++.. ++. ...+. . ....-.++
T Consensus 196 ~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~--~g~PDGi~ 272 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-F--DTLVDNIS 272 (355)
T ss_dssp HHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-C--SSEEEEEE
T ss_pred hhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-C--CCCCceEE
Confidence 1123322 388987766554 568899999863 322 12231 1 24578899
Q ss_pred Ecc-CCCEEEEEeCC
Q psy15157 294 FTR-NGKYLLSSGKD 307 (344)
Q Consensus 294 ~~~-~~~~l~s~~~d 307 (344)
+++ +|++.+++..+
T Consensus 273 vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 273 VDPVTGDLWVGCHPN 287 (355)
T ss_dssp ECTTTCCEEEEEESC
T ss_pred EeCCCCcEEEEecCC
Confidence 999 59987766533
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.72 E-value=0.72 Score=38.20 Aligned_cols=128 Identities=17% Similarity=0.248 Sum_probs=68.5
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCc---cccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEEc-----
Q psy15157 190 SAPILASGSKD-----KTVKMFDYSKSS---VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLYS----- 251 (344)
Q Consensus 190 ~~~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~~----- 251 (344)
++.+++.|+.+ ..+.+||..+.+ ...............++.+ ++..++.|+.+ ..+..|+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 46677777765 468899988765 3222111111111222222 55666666533 2344442
Q ss_pred ------------------CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 252 ------------------SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 252 ------------------~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
.++++++.|+.+ ..+.+||..+.+....-..........++.+ ++++++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCC
Confidence 245666677654 4588899887754432111111111222333 56777777764
Q ss_pred ----CcEEEEEcCCCeeE
Q psy15157 308 ----SLVKLWELSSARCL 321 (344)
Q Consensus 308 ----g~i~vwd~~~~~~~ 321 (344)
..+.+||+.+.+-.
T Consensus 218 ~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp SSBCCCEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCCcEE
Confidence 46899999877543
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.72 E-value=0.65 Score=38.62 Aligned_cols=127 Identities=12% Similarity=0.214 Sum_probs=66.9
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------CEEEEEc--------
Q psy15157 190 SAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------FVLRLYS-------- 251 (344)
Q Consensus 190 ~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~~~-------- 251 (344)
++.+++.|+.+ ..+.+||..+.+...............++.+ ++..++.|+.+ ..+..|+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 55677777755 6688899887654322211111111222222 55666666543 2344442
Q ss_pred ---------------CCCCEEEEEeC---------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 252 ---------------SDGRIYCSGSK---------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 252 ---------------~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
.++++++.|+. -..+.+||..+.+....-........-..+.+ ++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 24556666653 34588899887754332111111111222223 66777777654
Q ss_pred -----CcEEEEEcCCCee
Q psy15157 308 -----SLVKLWELSSARC 320 (344)
Q Consensus 308 -----g~i~vwd~~~~~~ 320 (344)
..+.+||+.+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TTEEBCCEEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcE
Confidence 4588999987643
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.70 E-value=0.58 Score=36.99 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=41.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccce---eeec--cccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH---KTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
..+.+++|+|++.+.+. .+|.+.-.+..+.....-+ .... .-..-.++.|+|+|.+.++ .|+.|.-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEe
Confidence 36779999999986666 6787666665442211100 1110 0111367899999998888 44777655
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.66 E-value=0.13 Score=40.61 Aligned_cols=111 Identities=16% Similarity=0.086 Sum_probs=63.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..+++++|+|+|.+.+. .+|.+.-.+..+....... .....+-. .+-.. ..++.|.|++.+.++ .
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~---------~s~t~IG~-~Gw~~-F~a~~fD~~G~LYav--~ 105 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM---------GRAKKIGN-GGWNQ-FQFLFFDPNGYLYAV--S 105 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH---------HHCEEEEC-SCGGG-CSEEEECTTSCEEEE--E
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccc---------ccccEecc-ccccc-ceEEEECCCCCEEEe--C
Confidence 47889999999997777 6776554443221000000 00000100 01112 468899999988877 5
Q ss_pred CCcEEEEEcCCCcccc---ceeeec--cccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 200 DKTVKMFDYSKSSVRK---AHKTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
||.|+-++--+..... .-.... .-..+..|.+.|+|.+.++. ++.+
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 6999888753321111 101111 12457899999999988887 5554
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.65 E-value=0.3 Score=40.80 Aligned_cols=55 Identities=5% Similarity=0.033 Sum_probs=31.7
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
..+.+||..+.+....-........-.++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 4688899887754432111111111223333 67777777764 5689999987654
No 317
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=95.41 E-value=0.026 Score=37.16 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCC-----CCCCchHHHHHHHhhhccCcc
Q psy15157 17 QEALYRLIISQLYYDGHHPMAITLQSSCNVVE-----PCPPSDRLSQLVHIGLAHEPD 69 (344)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~-----~~~p~~~l~~l~~~~~~~~~~ 69 (344)
..++..+++++|...|+..+|-+++.|..... ...|+..|..+++|++.+..-
T Consensus 5 sdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~~~~~VppgaLVsllQKGL~Y~~~ 62 (90)
T 2xtc_A 5 SDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEA 62 (90)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCccccccccCCcchHHHHHHHHHHHHHH
Confidence 46789999999999999999999999855422 235788999999999987654
No 318
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=95.37 E-value=0.015 Score=38.02 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=42.7
Q ss_pred HHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcc
Q psy15157 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPD 69 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~ 69 (344)
-+|+++|+..|+++|...|+..++.++..+++...+.....+...++++.|....+
T Consensus 7 ~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~ky~gLLEKKWTSViR 62 (88)
T 1uuj_A 7 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 62 (88)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhhhhhhhhhhhHHHHHH
Confidence 58899999999999999999999999999987544322223456777777665444
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.31 E-value=1.1 Score=37.49 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=68.7
Q ss_pred CCCEEEEEeCC--------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-C-----CEEEEE-----
Q psy15157 190 SAPILASGSKD--------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-H-----FVLRLY----- 250 (344)
Q Consensus 190 ~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-----~~i~~~----- 250 (344)
++.+++.|+.+ ..+.+||..+.+...............++. -+++.++.|+. + ..+..|
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 55667777642 458899988765432221111111112222 35556666654 1 234444
Q ss_pred ------------------cCCCCEEEEEeCCC-----cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 251 ------------------SSDGRIYCSGSKDG-----DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 251 ------------------~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
..++++++.|+.++ .+.+||..+.+-...-...........+.+ ++++++.|+.+
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 12556777777654 488899887754432211111111223333 56777777753
Q ss_pred C--------------cEEEEEcCCCeeEEE
Q psy15157 308 S--------------LVKLWELSSARCLIA 323 (344)
Q Consensus 308 g--------------~i~vwd~~~~~~~~~ 323 (344)
+ .+.+||+.+.+-...
T Consensus 254 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 254 TLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ccCcCCccccccccCcEEEecCCCChhhhh
Confidence 2 378899988765444
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.22 E-value=0.66 Score=41.35 Aligned_cols=65 Identities=14% Similarity=0.249 Sum_probs=40.5
Q ss_pred CcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeee------ccccceEEEEEecC---CCEEEEEe
Q psy15157 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI------QESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
.-...+.|+|.|+|+++++-...+.|++++..++......... .....+..|+|+|+ +.+|+++.
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3446789999999997776544457888876554432211111 12345678999996 56665543
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.90 E-value=1.5 Score=36.99 Aligned_cols=161 Identities=9% Similarity=0.102 Sum_probs=93.1
Q ss_pred CCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...|..-..+++.++++..+- .|.+.+|..+ ....+.+.+|.+....+....+.
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-------------------r~~sQ~ieGhaa~F~~~~~~g~~ 211 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-------------------RKVSQPIEGHAASFAQFKMEGNA 211 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-------------------TTEEEEECCSEEEEEEECCTTCS
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-------------------ccccceeeeeeeeeEEEecCCCC
Confidence 356777777888887765443 3678888886 34566777887665444443221
Q ss_pred ---CEEEEEeC---CCcEEEEEcCCC-ccccceee---------eccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 192 ---PILASGSK---DKTVKMFDYSKS-SVRKAHKT---------IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 192 ---~~l~s~~~---dg~i~iwd~~~~-~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.+|+-+.. .+.++|-++... .....+.. ....+...++..++...
T Consensus 212 ~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg------------------- 272 (365)
T 2xzh_A 212 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD------------------- 272 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-------------------
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-------------------
Confidence 13333333 258888888543 11111110 01123344455554333
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
.++.-+.-|.|++||+.++.++..-+-..+ .|-..+-+.+..-++.-...|.|.--.+...+
T Consensus 273 viyviTK~G~ihlyDleTgt~i~~nrIS~d--~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 273 VVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEEEeCCcEEEEEEcccCcEEEEeccCCC--ceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 344567889999999999999877653333 45544544444455666677777666665544
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.81 E-value=0.9 Score=38.87 Aligned_cols=61 Identities=16% Similarity=0.289 Sum_probs=38.3
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee---eccccceEEEEEecC---CCEEEEEe
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT---IQESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
-..-..++|.|++.++++ ..+|.|++++ +++....... .........++++|+ +..|+++.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 345679999999986655 5669999998 3332111110 112345788999997 55665543
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.77 E-value=2 Score=37.80 Aligned_cols=180 Identities=12% Similarity=0.198 Sum_probs=105.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 125 GAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 204 (344)
.-.+|..+.+|-=. ..++.|||+++. ..+...... ..|..-.|-.+. .|+-.+ +..|+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K------------------~klks~~~~-e~VvfWkWis~~-~l~lVT-~taVy 128 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMK------------------SKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVY 128 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTT------------------EEEEEEECS-SCCCEEEEEETT-EEEEEC-SSEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHh------------------hhhcceecC-CCceEEEecCCC-eEEEEc-CCeeE
Confidence 34566666666554 688999999742 223333322 345555665443 333333 57899
Q ss_pred EEEcCCCc-cccceeeec--cccceEEEEEecCCCEEEEEe---C----CCEEEEEcCC---------------------
Q psy15157 205 MFDYSKSS-VRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGT---D----HFVLRLYSSD--------------------- 253 (344)
Q Consensus 205 iwd~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~---~----~~~i~~~~~~--------------------- 253 (344)
-|++.... ..+.+.... ....|.....+++.++++..+ . .|.+.+|+.+
T Consensus 129 HWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g 208 (494)
T 1bpo_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 208 (494)
T ss_dssp EEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTT
T ss_pred EecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCC
Confidence 99997532 122222111 234567777788899887543 1 3566676321
Q ss_pred ----CCEEEEEeCC---CcEEEEeCCCC--------eEEeee--cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 254 ----GRIYCSGSKD---GDIKIWDGVSS--------KCVATF--SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 254 ----~~~l~~~~~d---g~i~iwd~~~~--------~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
...++.+... +.++|.++... +....+ .......-..++..++.-..++.-+.-|.|++||+.
T Consensus 209 ~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp CSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 1233333332 67888887432 111111 111112235678888888889999999999999999
Q ss_pred CCeeEEEeec
Q psy15157 317 SARCLIAYTG 326 (344)
Q Consensus 317 ~~~~~~~~~~ 326 (344)
+|.++..-+-
T Consensus 289 Tgt~i~~nrI 298 (494)
T 1bpo_A 289 TGTCIYMNRI 298 (494)
T ss_dssp TCCEEEEEEC
T ss_pred cceeeeeecc
Confidence 9999876553
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.69 E-value=4.1 Score=40.98 Aligned_cols=74 Identities=18% Similarity=0.112 Sum_probs=45.7
Q ss_pred CCceEEEEECCC------CCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc--C
Q psy15157 119 KSPCRAGAFSID------GQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH--P 189 (344)
Q Consensus 119 ~~~v~~~~~s~~------~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~ 189 (344)
...|.|+++.+. ++++|.|.. |++|+|+++.+..... ...+.. .....++.+. .
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~----------------~~~L~~-~~~p~si~l~~~~ 615 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLH----------------KEMLGG-EIIPRSILMTTFE 615 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEE----------------EEECCS-SCCEEEEEEEEET
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEE----------------EEECCC-CCCCcEEEEEEeC
Confidence 458999999863 469999997 9999999997432111 111111 1122222222 2
Q ss_pred CCCEEEEEeCCCcEEEEEcC
Q psy15157 190 SAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~ 209 (344)
...+|..|-.||.+.-+.+.
T Consensus 616 ~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 616 SSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TEEEEEEEETTSEEEEEEEC
T ss_pred CCcEEEEEeCCCeEEEEEEc
Confidence 33478889999998766554
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.68 E-value=1.8 Score=36.91 Aligned_cols=114 Identities=12% Similarity=0.044 Sum_probs=65.6
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe----cCCcCCeEEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL----YDHIEEVTCLEF 187 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~ 187 (344)
...+...-...+.|+|.|+|+++++--..|.|++++...+.. ..+..+ ....+....|++
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~----------------~~v~~~~~v~~~g~~GllGia~ 87 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK----------------TELGEVPGVSPSGEGGLLGIAL 87 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----------------EEEEECTTCCCBTTBSEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE----------------eeecccCceeecCCCCceeeEe
Confidence 334445556789999999999888776589999887542211 111111 223456889999
Q ss_pred cCC----CCEEEEE--eCCCcEEEEEcCCCc-----c---ccceeee--ccccceEEEEEecCCCEEEEE
Q psy15157 188 HPS----APILASG--SKDKTVKMFDYSKSS-----V---RKAHKTI--QESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 188 ~~~----~~~l~s~--~~dg~i~iwd~~~~~-----~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 241 (344)
+|+ +.++++- ..++.|.-|.+.... . ...+... ........|.|.|+|.++++.
T Consensus 88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 995 4344432 244566666665421 1 1111111 112234568999999766653
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.11 Score=44.24 Aligned_cols=120 Identities=8% Similarity=0.062 Sum_probs=71.0
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEE-eCCCcEEEEe
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG-SKDGDIKIWD 270 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~-~~dg~i~iwd 270 (344)
.+++.++.||.|.-+|..+++....+... ...++.... .+... .++..++.. +.||.|..+|
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~-~~~~~---------------~~~~~~vv~p~~dG~l~a~~ 73 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQ-EPSRL---------------ETYETLIIEPFGDGNIYYFN 73 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECC-CSCTT---------------TSSEEEEECCSTTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEec-CCccc---------------cCCcEEEEEECCCCEEEEEE
Confidence 36888999999999999998776655432 111221111 01000 022223233 5788888888
Q ss_pred CCCCeEEeeecccC--CCccEEE---EEE-c----cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 271 GVSSKCVATFSKAH--DGAEISS---LTF-T----RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 271 ~~~~~~~~~~~~~~--~~~~v~~---i~~-~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..+|.....+.... ..+++.. ... . ..+..+++|+.+|.+...|+++|+.+.++....
T Consensus 74 ~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 74 AHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp TTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred CCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 88775544332110 1111211 001 0 145678999999999999999999999997653
No 327
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.51 E-value=1.9 Score=36.40 Aligned_cols=161 Identities=6% Similarity=-0.044 Sum_probs=89.2
Q ss_pred ceEEEEE---CCCCCEEEEEeC-------------CCeEEEEEcC---CccccccCCCCCCcCCCCCCceEEEecCC---
Q psy15157 121 PCRAGAF---SIDGQLCATGSV-------------DASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDH--- 178 (344)
Q Consensus 121 ~v~~~~~---s~~~~~l~sg~~-------------dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--- 178 (344)
.+..+.| .++++++++... +..|..||+. ++... ....+...
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~----------------~~~dL~~~~~~ 127 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPV----------------WSVNFEKVQDE 127 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCS----------------EEEESHHHHHH
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEE----------------EEecCcccccc
Confidence 3578999 688888876442 6779999986 32111 11122111
Q ss_pred --------cCCeEEEEEcCCCCEEEEEeCC-CcEEEEEcCCCccccceeee----ccccceEEEEEecCCCEEEEEeCCC
Q psy15157 179 --------IEEVTCLEFHPSAPILASGSKD-KTVKMFDYSKSSVRKAHKTI----QESTFVRCLSFHPCGDYMVVGTDHF 245 (344)
Q Consensus 179 --------~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~ 245 (344)
.....+++..++|+..++++.- +.|...+..... ....... ......+.|+++|+|..|++
T Consensus 128 ~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv----- 201 (334)
T 2p9w_A 128 FEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIA----- 201 (334)
T ss_dssp HHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEE-----
T ss_pred ccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEE-----
Confidence 1247899999999999998888 887777765432 1111111 11123557788887666654
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--Eeeec-ccC-CCccEEEE-EEccCCCE-EEEEeCCCcEEEEEcCC
Q psy15157 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC--VATFS-KAH-DGAEISSL-TFTRNGKY-LLSSGKDSLVKLWELSS 317 (344)
Q Consensus 246 ~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~-~~~-~~~~v~~i-~~~~~~~~-l~s~~~dg~i~vwd~~~ 317 (344)
....|.+..+|+..... +..-. +.. .......| .-..+|+. |++.+..+.+.+.+-..
T Consensus 202 --------------~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 202 --------------FGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp --------------ESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred --------------EcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 43478888888774322 11100 100 11123343 33347777 44445566555555433
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.30 E-value=2 Score=35.80 Aligned_cols=66 Identities=9% Similarity=0.240 Sum_probs=37.8
Q ss_pred CCCEEEEEeC-C-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCee
Q psy15157 253 DGRIYCSGSK-D-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-----LVKLWELSSARC 320 (344)
Q Consensus 253 ~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~ 320 (344)
++++++.|+. + ..+.+||..+.+-...-........-.++.+ +++.++.|+.++ .+.+||+.+.+-
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 4566677765 2 4688899887754332211111111222233 677777777654 488899987654
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.24 E-value=2.2 Score=36.17 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccc-----eEEEEEe-----cCCCEEEEEeCCCEEEE-------Ec--
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-----VRCLSFH-----PCGDYMVVGTDHFVLRL-------YS-- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~~-----~~~~~l~~~~~~~~i~~-------~~-- 251 (344)
+..+++|+.+|.+...|+.+++.+..+........ ..|.... ..+..++.+..+..+.. |.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~~sG~~W~~~ 190 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHSYDGASYNVT 190 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECCTTSCCCCCE
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEECCCCCeEEEe
Confidence 44778999999999999999987766543221110 1111111 12355666655444444 41
Q ss_pred --------------------CCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 252 --------------------SDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 252 --------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.++.+ +.++.||.|.-+|..+|+.+.
T Consensus 191 ~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 191 YSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred cccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 12555 457899999999999888765
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.10 E-value=1.1 Score=38.29 Aligned_cols=60 Identities=10% Similarity=0.068 Sum_probs=38.1
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee----eccccceEEEEEecC---CCEEEEEe
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
-.....++|.|++.++++ ..+|.|+++|. +++ ..+.. .........++++|+ +..|+++.
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 445789999999985554 56699999973 443 11111 112345788999997 55555543
No 331
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.02 E-value=2.4 Score=35.75 Aligned_cols=181 Identities=12% Similarity=0.211 Sum_probs=106.9
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 125 GAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 204 (344)
.-.+|..+.+|-=. ..++.|+|+++. ..+....- ...|.--.|-.+.. |+-.+ +..|+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK------------------~klks~~~-~e~VvfWkWis~~~-L~lVT-~taVy 129 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMK------------------SKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVY 129 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTT------------------EEEEEEEC-SSCEEEEEECSSSE-EEEEE-SSEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHh------------------hhhcceec-CCccEEEEecCCCe-EEEEc-CCcEE
Confidence 34577777666654 678999999742 22333322 34677777765543 33333 46899
Q ss_pred EEEcCCCc-cccceeeec--cccceEEEEEecCCCEEEEEeC-------CCEEEEEcCC---------------------
Q psy15157 205 MFDYSKSS-VRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGTD-------HFVLRLYSSD--------------------- 253 (344)
Q Consensus 205 iwd~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-------~~~i~~~~~~--------------------- 253 (344)
-|++.... ..+.+.... ....|.....+++.++++..+- .|.+.+|+.+
T Consensus 130 HWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g 209 (365)
T 2xzh_A 130 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 209 (365)
T ss_dssp EEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTT
T ss_pred EEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCC
Confidence 99997532 222222111 2345667777888898876532 2566677321
Q ss_pred ----CCEEEEEeCC---CcEEEEeCCCC---e------EEee-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 254 ----GRIYCSGSKD---GDIKIWDGVSS---K------CVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 254 ----~~~l~~~~~d---g~i~iwd~~~~---~------~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
...++.+... +.++|.++... . .+.. +.......-..++..++.-..++.-+.-|.|++||+.
T Consensus 210 ~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDle 289 (365)
T 2xzh_A 210 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 289 (365)
T ss_dssp CSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcc
Confidence 1233333322 57888887432 1 1111 1111112235677888877888889999999999999
Q ss_pred CCeeEEEeecC
Q psy15157 317 SARCLIAYTGA 327 (344)
Q Consensus 317 ~~~~~~~~~~~ 327 (344)
+|.++..-+-.
T Consensus 290 Tgt~i~~nrIS 300 (365)
T 2xzh_A 290 TGTCIYMNRIS 300 (365)
T ss_dssp TCCEEEEEECC
T ss_pred cCcEEEEeccC
Confidence 99998765543
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.92 E-value=4 Score=37.91 Aligned_cols=177 Identities=12% Similarity=0.041 Sum_probs=92.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|.+.+. ++.+-...+.|+.++.+.. .....+.........+++... ++++++-
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~------------------~~~~v~~~~~~~p~GlAvD~~~~~lY~tD 410 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS------------------GSQFVVTAQIAHPDGIAVDWVARNLYWTD 410 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC------------------ccEEEEECCCCCcCceEEecccCcEEEEe
Confidence 3467788887444 4444445677877777521 111122223345678889864 4466666
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEEcCCC---------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLYSSDG--------------------- 254 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~~--------------------- 254 (344)
+..+.|.+.++.... ...+. ...-.....++++|...+++.... ...|.....+|
T Consensus 411 ~~~~~I~v~~~~G~~-~~~l~-~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~ 488 (619)
T 3s94_A 411 TGTDRIEVTRLNGTM-RKILI-SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDY 488 (619)
T ss_dssp TTTTEEEEEETTSCS-CEEEE-CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred CCCCcEEEEeCCCCe-EEEEE-ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcc
Confidence 667899999987542 22221 223345788999997556655542 23444432222
Q ss_pred ---CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 255 ---RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 255 ---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+++++=+..+.|..+++........+. ..- ....+++... +...++-...+.|...|..+|.
T Consensus 489 ~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~l-~~P~glav~~-~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMNTDGTGRRVLVE-DKI-PHIFGFTLLG-DYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEEE-CCC-CSSCCEEEET-TEEEEECTTSSCEEEEESSSCC
T ss_pred cCCEEEEEECCCCEEEEEecCCCceEEEec-cCC-CCcEEEEEEC-CEEEEeecCCCeEEEEEcCCCc
Confidence 222222333455555553322111111 111 1123455543 3444444566778888887773
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.88 E-value=2.5 Score=35.29 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=66.6
Q ss_pred CCCEEEEEeCC-------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC------CCEEEEEc-----
Q psy15157 190 SAPILASGSKD-------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD------HFVLRLYS----- 251 (344)
Q Consensus 190 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~~~----- 251 (344)
++.+++.|+.+ ..+.+||..+.+...............++. .++..++.|+. ...+..|+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777754 347888887765432211111111111112 35555566543 12344442
Q ss_pred ------------------CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 252 ------------------SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 252 ------------------~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
.++++++.|+.+ ..+.+||..+.+....-...........+.+ ++++++.||.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAM 264 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeec
Confidence 245666666643 3477888877654332111111111222222 56777777654
Q ss_pred -------------CcEEEEEcCCCeeEEE
Q psy15157 308 -------------SLVKLWELSSARCLIA 323 (344)
Q Consensus 308 -------------g~i~vwd~~~~~~~~~ 323 (344)
..+.+||+.+.+-...
T Consensus 265 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 265 IQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp BC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 4588999988766544
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.72 E-value=1.2 Score=42.09 Aligned_cols=120 Identities=13% Similarity=0.211 Sum_probs=58.8
Q ss_pred CCCCEEEEEeCCC--cEEEEEcCCCcccccee---eeccccceEEEEEecC-CCEEEEEeCCCEEEEEcCCCCEEEEEeC
Q psy15157 189 PSAPILASGSKDK--TVKMFDYSKSSVRKAHK---TIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLYSSDGRIYCSGSK 262 (344)
Q Consensus 189 ~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 262 (344)
.++.+++.|+.++ .+.+||..+.+...... .........++.+..+ +..++.|+.+. ++ ...
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~-------~~-----~~~ 566 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM-------DQ-----TTV 566 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT-------TS-----SCB
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC-------CC-----Cee
Confidence 3778888888755 68999988865432221 0001111122333433 33333322110 00 001
Q ss_pred CCcEEEEeCCCCe------EEeeecc-cCCCccEEEEEEccCCCEEEEEeC--------CCcEEEEEcCCCeeE
Q psy15157 263 DGDIKIWDGVSSK------CVATFSK-AHDGAEISSLTFTRNGKYLLSSGK--------DSLVKLWELSSARCL 321 (344)
Q Consensus 263 dg~i~iwd~~~~~------~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~--------dg~i~vwd~~~~~~~ 321 (344)
-..+.+||..+.. ....... ........+ +...++++++.||. ...|.+||+.+.+..
T Consensus 567 ~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 567 SDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI-KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE-EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred eCcEEEEEccCCccccceEEEEcCCCCCCCcccceE-EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2458889987766 1111110 011111223 33334777777774 345999999887654
No 335
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.59 E-value=3.1 Score=35.46 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=48.3
Q ss_pred EEEEEeCCCcEEEEeC-------CCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC-----CCeeEEE
Q psy15157 256 IYCSGSKDGDIKIWDG-------VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-----SARCLIA 323 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~-------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~ 323 (344)
++++...+|.+..|++ .+.+.++++... +.+-.|..++....|+.+-++.-|..++.. +++.+..
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~ 221 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDR 221 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEE
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEE
Confidence 5777778888988887 234566666543 358899999988999999998777777754 3456655
Q ss_pred ee
Q psy15157 324 YT 325 (344)
Q Consensus 324 ~~ 325 (344)
+.
T Consensus 222 ~~ 223 (355)
T 3amr_A 222 AD 223 (355)
T ss_dssp BS
T ss_pred ec
Confidence 53
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.35 E-value=2.4 Score=40.02 Aligned_cols=110 Identities=10% Similarity=0.131 Sum_probs=57.1
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 190 SAPILASGSKD------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 190 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
++.+++.|+.+ ..+.+||..+.+.............. +++.-.++..++ .|+.+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv-------------------~GG~~ 510 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLI-------------------LGGVT 510 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEE-------------------ECCBC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEE-------------------ECCCC
Confidence 66777887754 34788888775433221111111111 111112344444 44433
Q ss_pred C--cEEEEeCCCCeEEeeec---ccCCCccEEEEEEccC-CCEEEEEeC--C-----CcEEEEEcCCCe
Q psy15157 264 G--DIKIWDGVSSKCVATFS---KAHDGAEISSLTFTRN-GKYLLSSGK--D-----SLVKLWELSSAR 319 (344)
Q Consensus 264 g--~i~iwd~~~~~~~~~~~---~~~~~~~v~~i~~~~~-~~~l~s~~~--d-----g~i~vwd~~~~~ 319 (344)
+ .+.+||..+......-. .........++.+..+ ++.++.||. + ..+.+||+.+.+
T Consensus 511 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 511 EGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2 68999988876543221 0111111233555655 667777765 2 358899998876
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.10 E-value=4.3 Score=35.75 Aligned_cols=161 Identities=9% Similarity=0.091 Sum_probs=96.4
Q ss_pred CCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...|..-..+++.++++..+- .|.+.+|.++ ....+.+.+|.+....+....+.
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-------------------r~~sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-------------------RKVSQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-------------------TCCEEEECCSEEEEEEEECTTCS
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-------------------ccccchheeeeeeeEEEecCCCC
Confidence 356777777889998775432 4678899886 34456778887766555544322
Q ss_pred ---CEEEEEeCC---CcEEEEEcCCCc-ccccee---------eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 192 ---PILASGSKD---KTVKMFDYSKSS-VRKAHK---------TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 192 ---~~l~s~~~d---g~i~iwd~~~~~-~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.+++-+... +.++|-++.... ....+. .....+...++..++....
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv------------------ 272 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV------------------ 272 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE------------------
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE------------------
Confidence 244444443 789999886531 111110 0011334455555554333
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
++.-+.-|.|++||+.++.++..-+-..+ .|-..+-+....-++.-...|.|.--.+....
T Consensus 273 -iyviTK~G~i~lyDleTgt~i~~nrIs~~--~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 273 -VFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp -EEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred -EEEEecCceEEEEecccceeeeeecccCC--ceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 33567889999999999999877653332 45555555555556666677777666665443
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.10 E-value=2.5 Score=35.84 Aligned_cols=59 Identities=17% Similarity=0.095 Sum_probs=29.7
Q ss_pred cEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEEeCCC------cEEEEEcCCCeeEEEeecC
Q psy15157 265 DIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSSGKDS------LVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 265 ~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.+||..+.+.. ..+.... ..-.++. .+++.++.||.++ .|.++++++++.+..-..+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGR--AYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCEEEECC---CEEEEECSSCC--BSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eEEEEecCCCceeeCCCCCCCc--ccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 4778888765432 2232111 1122233 3678888888543 3666788888876655443
No 339
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.85 E-value=6 Score=36.78 Aligned_cols=183 Identities=10% Similarity=-0.034 Sum_probs=102.7
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------CcCCeEEEEEcCCCC
Q psy15157 120 SPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------HIEEVTCLEFHPSAP 192 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~ 192 (344)
..+..++|.+.++.|.-+ ...+.|+.++.+.. . ....+.. ....+..+++...+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~-----------------~-~~~v~~~~~~~~~~~~~p~glAvD~~~~ 401 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGS-----------------Q-GFTVVVSSVPSQNLEIQPYDLSIDIYSR 401 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----------------S-CEEEEC--------CCCEEEEEEETTTT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCC-----------------C-ceEEEEcccccccccCCcceEEeeccCC
Confidence 457889998855544444 34677888876421 1 1111111 234678999998765
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCC--EEEEE------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHF--VLRLY------------------ 250 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~--~i~~~------------------ 250 (344)
++++-+..+.|.+.++.. +....+. .........++++|...+++... ... .|...
T Consensus 402 nLY~td~~~~~I~v~~~~G-~~~~~l~-~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P 479 (628)
T 4a0p_A 402 YIYWTCEATNVINVTRLDG-RSVGVVL-KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKP 479 (628)
T ss_dssp EEEEEETTTTEEEEEETTS-CEEEEEE-ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCE
T ss_pred eEEEEcCCCCEEEEEECCC-CeEEEEE-eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCc
Confidence 556767788999999864 3322222 22345678999999555554433 222 34333
Q ss_pred -----cCCCCEEEEE-eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 -----SSDGRIYCSG-SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 -----~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
++.+..|+.+ +..+.|..+|+.... ...+..... ....+++... +..+++-...+.|...|..+|+....+
T Consensus 480 ~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~-~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 480 IALALDSRLGKLFWADSDLRRIESSDLSGAN-RIVLEDSNI-LQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSC-SCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred cEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc-eEEEEcCCC-CCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 3333333333 334667777764322 222321111 2357777764 555566667778888888877655444
Q ss_pred e
Q psy15157 325 T 325 (344)
Q Consensus 325 ~ 325 (344)
.
T Consensus 557 ~ 557 (628)
T 4a0p_A 557 Q 557 (628)
T ss_dssp E
T ss_pred e
Confidence 4
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.77 E-value=3.7 Score=34.15 Aligned_cols=65 Identities=18% Similarity=0.368 Sum_probs=35.8
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCe
Q psy15157 253 DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSAR 319 (344)
Q Consensus 253 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 319 (344)
++.+++.|+.+ ..+.+||..+.+-...-..........++.+ +++.++.||.+ ..+.+||+.+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 45666666642 3588999887754332111111111222333 56777777643 347789987764
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.73 E-value=9.1 Score=38.50 Aligned_cols=69 Identities=10% Similarity=-0.064 Sum_probs=45.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC------CCEEEEEeC-CCcEEEEEcCCCeeEEEee
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN------GKYLLSSGK-DSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~------~~~l~s~~~-dg~i~vwd~~~~~~~~~~~ 325 (344)
.+++.++ ++.+.++++..++...... ..-...|.|+++.|. +++++.|.. |++|+|+++.+.+.+....
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 4455554 5667777766554322111 111246999998763 478999996 9999999998877665544
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.36 E-value=5.6 Score=35.42 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=33.7
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceee----ec------cccceEEEEEecC
Q psy15157 180 EEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKT----IQ------ESTFVRCLSFHPC 234 (344)
Q Consensus 180 ~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~------~~~~v~~~~~~~~ 234 (344)
..-+.|+|.|++. .|+.+...|.|++++.........+.. .. ....+..|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567999999986 344557789999997543211111110 10 1345788999996
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.27 E-value=3.2 Score=35.42 Aligned_cols=61 Identities=8% Similarity=0.132 Sum_probs=37.8
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcccccee----e-eccccceEEEEEecC---CCEEEEE
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHK----T-IQESTFVRCLSFHPC---GDYMVVG 241 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~----~-~~~~~~v~~~~~~~~---~~~l~~~ 241 (344)
-.....|+|.|+++ +++ +...|.|++++.. +.....+. . .........++++|+ +.+|+++
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 34568999999998 555 4567999999853 22211111 0 112345688999996 5555554
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.42 E-value=2.1 Score=36.39 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=14.3
Q ss_pred CCCEEEEEeC-C---------CeEEEEEcCC
Q psy15157 130 DGQLCATGSV-D---------ASIKILDVDR 150 (344)
Q Consensus 130 ~~~~l~sg~~-d---------g~v~iwd~~~ 150 (344)
++++++.|+. + ..+.+||..+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5777777776 2 3577888764
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.97 E-value=9.9 Score=38.91 Aligned_cols=175 Identities=11% Similarity=0.216 Sum_probs=98.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEE
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVK 204 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~ 204 (344)
-.+|..+.+|-=. ..++.|||+++... +..+.. ...|.--.|-.... -|+| +..|+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~k------------------lks~~~-~e~VvfWkWis~~~l~lVT---~~aVy 128 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSK------------------MKAHTM-TDDVTFWKWISLNTVALVT---DNAVY 128 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhh------------------hccccc-CCCceEEEecCCCeeEEEc---CCeEE
Confidence 3456666555543 67899999974211 111111 23566666754443 2333 46799
Q ss_pred EEEcCCCc-cccceeeec--cccceEEEEEecCCCEEEEEe-------CCCEEEEEc-----------------------
Q psy15157 205 MFDYSKSS-VRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGT-------DHFVLRLYS----------------------- 251 (344)
Q Consensus 205 iwd~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-------~~~~i~~~~----------------------- 251 (344)
-|++.... ..+.+.... ....|..-..+++.++++..+ -.|.+.+||
T Consensus 129 HW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~ 208 (1630)
T 1xi4_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 208 (1630)
T ss_pred EeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCC
Confidence 99996422 111221110 134566677788888887543 246777772
Q ss_pred -CC-CCEEEEEeC---CCcEEEEeCCCC---eEEe------e-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 252 -SD-GRIYCSGSK---DGDIKIWDGVSS---KCVA------T-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 252 -~~-~~~l~~~~~---dg~i~iwd~~~~---~~~~------~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+. ...++.+.. .+.++|-++... .... . +.......-..++..++.-..+..-+.-|.|+++|+.
T Consensus 209 ~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~ 288 (1630)
T 1xi4_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (1630)
T ss_pred CCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc
Confidence 22 223333322 267888887543 1110 0 1110111224567777777788888999999999999
Q ss_pred CCeeEEE
Q psy15157 317 SARCLIA 323 (344)
Q Consensus 317 ~~~~~~~ 323 (344)
||.++..
T Consensus 289 t~~~i~~ 295 (1630)
T 1xi4_A 289 TGTCIYM 295 (1630)
T ss_pred cchhhhh
Confidence 9987643
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.73 E-value=6.4 Score=35.87 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=71.0
Q ss_pred eEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCcc---------ccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 182 VTCLEFHPSAPILAS-GSKDKTVKMFDYSKSSV---------RKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 182 v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~---------~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
...+..+|||++++. |-.+.++.++|+++-.. ... .....-.-.....+|+++| ..+
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aY----------- 392 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAY----------- 392 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEE-----------
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceE-----------
Confidence 346788999997655 45689999999875211 000 1111223445667888766 333
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCC----------eEEeeecccCCCccEEEEEE------ccCCCEEEEEe---CCCcE-
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSS----------KCVATFSKAHDGAEISSLTF------TRNGKYLLSSG---KDSLV- 310 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~~~v~~i~~------~~~~~~l~s~~---~dg~i- 310 (344)
.+.-.|..|.-|++... ..+..+.-+. .+-.+.- .++|+||++.. .|..+
T Consensus 393 -------TtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y---qpGH~~~~~get~~~dGk~lv~lnK~skdrfl~ 462 (638)
T 3sbq_A 393 -------TTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY---QPGHLHASLCETNEADGKWLVALSKFSKDRFLP 462 (638)
T ss_dssp -------EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS---CEEEEEETTTTSTTCCSCEEEEEESCCTTSSCC
T ss_pred -------eeeeecceEEEEeccHHHHHhcCccCCeeeecccccc---CCcccccCCCccCCCCccEEEEecccccccCcC
Confidence 25668888999987643 3344443222 2333433 57899999974 56554
Q ss_pred ---------EEEEcCCCee
Q psy15157 311 ---------KLWELSSARC 320 (344)
Q Consensus 311 ---------~vwd~~~~~~ 320 (344)
.+.|+...+.
T Consensus 463 vGpl~pen~QlidIsGdkM 481 (638)
T 3sbq_A 463 VGPLHPENDQLIDISGDEM 481 (638)
T ss_dssp CSSSCCEEEEEEECSSSSC
T ss_pred CCCCCCCcceeEecCCCce
Confidence 7888865543
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.51 E-value=2.3 Score=41.73 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=34.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 47778888889999999999999999999999998864
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.32 E-value=6.6 Score=38.56 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=30.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM 157 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~ 157 (344)
.+.+++..++..+++|-+.|+++|+|++.++.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677777788889999999999999999987665443
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.23 E-value=2.2 Score=42.94 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=33.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+.+++..++..++++-+.|+++|+|++.+++++.+..-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 355666777889999999999999999999999998753
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.20 E-value=17 Score=30.16 Aligned_cols=120 Identities=8% Similarity=0.119 Sum_probs=63.2
Q ss_pred EEcCCCCEEEEEeC-C-------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--CCCEEEE
Q psy15157 186 EFHPSAPILASGSK-D-------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRL 249 (344)
Q Consensus 186 ~~~~~~~~l~s~~~-d-------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~ 249 (344)
-+++++.+|+=+.. + ..|+..++...+... +. .. . +..|++++++|+... .++.-.+
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~--~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PD--P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CS--C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cC--C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 45677776654433 2 457777776653211 11 11 1 225677888887765 2333333
Q ss_pred E--------------------cCCCCEEEEEeC-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 250 Y--------------------SSDGRIYCSGSK-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 250 ~--------------------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
| +++++.|+-.+. ...|.+-++..+.....+. . ... ..++|++.+|+-...+
T Consensus 132 y~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~----~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-C----NCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEEETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-S----CEE-EEEEEETTEEEEEEGGG
T ss_pred EEEECCCCCeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-C----Ccc-ceeeecCCEEEEEEcCC
Confidence 3 345555554443 5678888877665433332 1 122 2355888877655432
Q ss_pred -CcEEEEEcCCC
Q psy15157 308 -SLVKLWELSSA 318 (344)
Q Consensus 308 -g~i~vwd~~~~ 318 (344)
..|..-++..+
T Consensus 206 ~~~I~~~~ldG~ 217 (302)
T 3s25_A 206 DNAIVHVNINNP 217 (302)
T ss_dssp TTEEEEECSSSC
T ss_pred CcEEEEEECCCC
Confidence 34555555443
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.34 E-value=31 Score=30.60 Aligned_cols=116 Identities=18% Similarity=0.134 Sum_probs=59.2
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-ecCCcCCeEEEEEcCC----CCE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-LYDHIEEVTCLEFHPS----API 193 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~----~~~ 193 (344)
...+.|+|.|+|. .|+.+...|.|++++.+......... +... ..... ..........|+|+|+ +.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~------~~~~-~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYL------DIHK-LVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSE------ECTT-TBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeec------CCcc-eeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 4678999999996 44455678999999753211000000 0000 00000 0012456789999996 444
Q ss_pred EEEEeC--C----------CcEEEEEcCCC--c------cccceeee--ccccceEEEEEecCCCEEEEEe
Q psy15157 194 LASGSK--D----------KTVKMFDYSKS--S------VRKAHKTI--QESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 194 l~s~~~--d----------g~i~iwd~~~~--~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
+++-+. + ..|.-|.+... . ....+... ........|.|.|+|.+.++.+
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 444332 1 13444665431 0 01111111 1234467899999997666544
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.92 E-value=64 Score=33.36 Aligned_cols=66 Identities=12% Similarity=0.066 Sum_probs=37.8
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
++.-..+..-+.-|.|++||+.++.++..-+-.. .+|...+-+....-++.....|.|.--.+...
T Consensus 267 s~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~--~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 267 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred ccccCEEEEEecCceEEEEecccchhhhhccccC--CceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 4444566777889999999999998876543222 23433333333233444445555555444443
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.83 E-value=7.3 Score=35.50 Aligned_cols=65 Identities=25% Similarity=0.232 Sum_probs=41.7
Q ss_pred cCCCCEEEE-EeCCCcEEEEeCCCC------eE-------EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 SSDGRIYCS-GSKDGDIKIWDGVSS------KC-------VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ~~~~~~l~~-~~~dg~i~iwd~~~~------~~-------~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+|+|++++. |-.+.++.++|.+.. +. +..... +-.....+|+++|.-..|---|..|.-|++.
T Consensus 331 sPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~---GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 331 SSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL---GLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC---CSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred CCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC---CCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 455555444 445678999997742 11 222221 2236788999999555555689999999997
Q ss_pred CC
Q psy15157 317 SA 318 (344)
Q Consensus 317 ~~ 318 (344)
..
T Consensus 408 ~a 409 (638)
T 3sbq_A 408 EA 409 (638)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.51 E-value=4.8 Score=37.77 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=31.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.|.++.+ +..++++-+.|.++|+|++++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 478999999999999999999999988765
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=75.91 E-value=32 Score=28.39 Aligned_cols=91 Identities=7% Similarity=-0.054 Sum_probs=46.9
Q ss_pred EECCCCCEEEEEe--CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC-CCc
Q psy15157 126 AFSIDGQLCATGS--VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK-DKT 202 (344)
Q Consensus 126 ~~s~~~~~l~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~ 202 (344)
.|++++++++-.. .++.-.||.+.. . +.....+..+.. .+++++++.|+-.+. ...
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~----------------d-Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRI----------------D-GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEET----------------T-SCCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEEC----------------C-CCCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 6777888877665 345555554431 1 111222222322 345667776654443 567
Q ss_pred EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC
Q psy15157 203 VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD 243 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 243 (344)
|.+-++..+.... + ... ... ..++|++.+|+....
T Consensus 169 Iy~~~l~g~~~~~-l--~~~--~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 169 LYRYDTASQSEAL-F--YDC--NCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEEEETTTTEEEE-E--ECS--CEE-EEEEEETTEEEEEEG
T ss_pred EEEEECCCCCEEE-E--eCC--Ccc-ceeeecCCEEEEEEc
Confidence 7777776653222 1 111 111 235688888776543
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.18 E-value=17 Score=34.23 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=25.1
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeec
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFS 281 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 281 (344)
.+..++++-+.|.++|+||++++.++....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 357788899999999999999998877654
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.49 E-value=11 Score=37.88 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=30.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccce
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH 217 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 217 (344)
.+.+++..++..++++-+.|+++|+|++.++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556667778889999999999999999998765543
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.54 E-value=42 Score=30.70 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=28.4
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.+..++..+++....+. ......++.++|+||++.|++.
T Consensus 510 ~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEE
Confidence 56667777777655443 3334579999999999998876
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.18 E-value=46 Score=30.57 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=28.7
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.+.+.+..+++..+.+. ...++.++.++|+||++.|++.
T Consensus 510 ~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 35555666776655554 4456789999999999998876
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.19 E-value=1.1e+02 Score=26.18 Aligned_cols=126 Identities=7% Similarity=0.061 Sum_probs=69.2
Q ss_pred CCeEEEEEc---CC----CCEE-EEEeCCCcEEEEEcCCCcccccee----ee--------c----cccceEEEEEecC-
Q psy15157 180 EEVTCLEFH---PS----APIL-ASGSKDKTVKMFDYSKSSVRKAHK----TI--------Q----ESTFVRCLSFHPC- 234 (344)
Q Consensus 180 ~~v~~~~~~---~~----~~~l-~s~~~dg~i~iwd~~~~~~~~~~~----~~--------~----~~~~v~~~~~~~~- 234 (344)
..+..+++. |. +.++ ++=+..+-|.++|+.+++..+... .. + -...+..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 457777777 22 2333 444457789999998876433221 00 0 0236788899987
Q ss_pred ---CCEEEEEeCCCE--------------------------------EEEEc-CCCCEEEEEeCCCcEEEEeCCC-C---
Q psy15157 235 ---GDYMVVGTDHFV--------------------------------LRLYS-SDGRIYCSGSKDGDIKIWDGVS-S--- 274 (344)
Q Consensus 235 ---~~~l~~~~~~~~--------------------------------i~~~~-~~~~~l~~~~~dg~i~iwd~~~-~--- 274 (344)
++.|+...-.+. ....+ .+|.++++--....|..|+..+ .
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~ 311 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRM 311 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCG
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCcccc
Confidence 677766533221 11123 4566666666667788888765 1
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
+....+.....-..+..+.+..+|.+.+..+
T Consensus 312 ~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 312 KNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp GGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 1112222111223577777776766544443
No 361
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=52.17 E-value=1.6e+02 Score=27.77 Aligned_cols=172 Identities=12% Similarity=0.103 Sum_probs=91.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.++....+|. |-.|+.+| +..||..+..... ........|.++.. .++ .|..++.
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~------------------~~~~~~~~i~~i~~-~~g-~lWigt~ 120 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQ------------------PETDFPTDVRTMAL-QGD-TLWLGAL 120 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECC------------------CSCCCCSCEEEEEE-ETT-EEEEEET
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEEC------------------cccCCCceEEEEEe-cCC-cEEEEcC
Confidence 4688888777664 44555555 7889976432110 00011234666654 344 4555665
Q ss_pred CCcEEEEEcCCCcccccee--eeccccceEEEEEecCCCEEEEEeCCCEEEE---------------------------E
Q psy15157 200 DKTVKMFDYSKSSVRKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRL---------------------------Y 250 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---------------------------~ 250 (344)
+ -+..+|..+.+...... .......|.++....+|...+ |+.+|..++ .
T Consensus 121 ~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 198 (758)
T 3ott_A 121 N-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLE 198 (758)
T ss_dssp T-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEE
T ss_pred C-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEE
Confidence 5 57888876654321100 001234577777776666444 444443221 1
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+.++..|..|+. +-+..+|..+++...... .. ...|.++....+|.+.+ |+.+ -+.+++..+++.
T Consensus 199 d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~-l~-~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 199 DTTRQCVWIGTE-GYLFQYFPSTGQIKQTEA-FH-NNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPL 263 (758)
T ss_dssp ETTTTEEEEEEE-EEEEEEETTTTEEEEEEE-EE-EEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCC
T ss_pred ECCCCEEEEEEC-CCCeEEcCCCCeEEeccC-CC-CCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcE
Confidence 223444444543 347777877665332111 11 13588888888877554 4444 478888766543
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.43 E-value=62 Score=29.73 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=37.7
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE
Q psy15157 182 VTCLEFHPSAPILASGSKD------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
.--|+|+|.|.+++.-..+ ..+.+.+..+++..+.. .......++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~-~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE-eCCCCccCcCeeECCCCCEEEEE
Confidence 3568899999866653322 23444555555543333 23456779999999999888764
No 363
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=46.25 E-value=59 Score=29.12 Aligned_cols=69 Identities=13% Similarity=0.150 Sum_probs=42.6
Q ss_pred CeEEEEEcC----CCC--EEEEEeCCCcEEEEEcCCCc--------cccceeeeccccceEEEEEecCCCEEEEEeCCCE
Q psy15157 181 EVTCLEFHP----SAP--ILASGSKDKTVKMFDYSKSS--------VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246 (344)
Q Consensus 181 ~v~~~~~~~----~~~--~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 246 (344)
..++|+... ++. .+..|+.+|.|.-.-+.... ....+.......+|..|.+++++.+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 457776643 233 67789999987654442211 1112222234567899999999899988877766
Q ss_pred EEE
Q psy15157 247 LRL 249 (344)
Q Consensus 247 i~~ 249 (344)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=46.24 E-value=1.2e+02 Score=24.60 Aligned_cols=162 Identities=13% Similarity=-0.004 Sum_probs=79.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.|..++...+...++ . ||.|..|-.+....... + ..-...|..++...+...+ -. |
T Consensus 64 ~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~--------------P----~~~~~~v~~ia~G~~hs~a--l~-~ 119 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTV--------------P----AEARSGVDAIAAGAWASYA--LK-D 119 (282)
T ss_dssp CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCC--------------C----GGGSSSEEEEEEETTEEEE--EE-T
T ss_pred CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCC--------------C----cccCCCeEEEECcCCEEEE--Ee-C
Confidence 566777654333333 4 89999998653211100 0 0012357777765443333 34 8
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc----------------------CCCCEEE
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS----------------------SDGRIYC 258 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~----------------------~~~~~l~ 258 (344)
|.|+.|-......... . ......|..++... .+.++-+ ++.+..|- -....++
T Consensus 120 G~v~~wG~n~~gqlg~-~-~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~a 194 (282)
T 3qhy_B 120 GKVIAWGDDSDGQTTV-P-AEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLA 194 (282)
T ss_dssp TEEEEEECCTTSTTSC-C-GGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE
T ss_pred CeEEEecCCCCCcCCC-C-ccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEE
Confidence 9999998655321111 1 11123355444322 2222223 57777761 1222333
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
. .||.|+.|-......+..-... ...|..++...+. .++.. ||.|+.|-....
T Consensus 195 l--~~G~v~~wG~n~~gqlg~p~~~--~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 195 L--KDGKVIAWGDNRYKQTTVPTEA--LSGVSAIASGEWY-SLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp E--ETTEEEEEECCTTSTTCCCGGG--GSSCCEEEECSSC-EEEEE--TTEEEEESTTCC
T ss_pred E--ECCeEEEEECCCCCCCCCCccc--CCCceEEEcCCCE-EEEEE--CCEEEEecCCCC
Confidence 3 5888888865432111110001 1246677665433 23333 899999976543
No 365
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=45.81 E-value=38 Score=30.72 Aligned_cols=69 Identities=13% Similarity=0.149 Sum_probs=42.8
Q ss_pred CeEEEEEcCCC--CEEEEEeCCCcEEEEEcCCCc----cccceeeeccccceE-EEEEecCCCEEEEEeCCCEEEE
Q psy15157 181 EVTCLEFHPSA--PILASGSKDKTVKMFDYSKSS----VRKAHKTIQESTFVR-CLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 181 ~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.+++|+....+ ..+..|+.+|.|.-..+.... ....+.......+|. .|.+++++.+|++++..+.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 46667665533 367889999998766554321 111222222245674 7888888888888777666655
No 366
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=45.11 E-value=70 Score=21.72 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=8.2
Q ss_pred EEEEccCCCEEEEE
Q psy15157 291 SLTFTRNGKYLLSS 304 (344)
Q Consensus 291 ~i~~~~~~~~l~s~ 304 (344)
.+.+..||.+++-.
T Consensus 92 ~~~L~~dGnlvly~ 105 (113)
T 3mez_B 92 VLILQINGQAVVYG 105 (113)
T ss_dssp EEEECTTSCEEEEC
T ss_pred EEEEcCCceEEEec
Confidence 34566677666553
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=44.11 E-value=1.1e+02 Score=28.03 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=39.0
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE
Q psy15157 180 EEVTCLEFHPSAPILASGSK------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
.....|.|.++|.+.+.... ...|..++..+++..... .......++.++|+|+++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eCCCCccccCCEECCCCCEEEEE
Confidence 44678999999987763221 124666666666543322 12234568999999999888865
No 368
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=42.66 E-value=71 Score=29.84 Aligned_cols=57 Identities=11% Similarity=0.206 Sum_probs=35.5
Q ss_pred EEEEEeCCCcEE-EEeCCCCe-------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 256 IYCSGSKDGDIK-IWDGVSSK-------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 256 ~l~~~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
.++.|+.+|.|+ +.-...+. .+..+.....+.+|..|.+++++.+|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888764 33221111 2222222334457899999999999999998776554
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.50 E-value=2.2e+02 Score=26.77 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=23.0
Q ss_pred ccEEEEEEccCCCEEEEEeCCCc--EEEEEcCCCe
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSL--VKLWELSSAR 319 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~--i~vwd~~~~~ 319 (344)
..+..+.|..+ .++++...++. |+++|+.+++
T Consensus 350 ~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 350 EVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 46888888865 56777777765 6778877664
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=41.99 E-value=70 Score=28.64 Aligned_cols=58 Identities=10% Similarity=0.173 Sum_probs=35.8
Q ss_pred CEEEEEeCCCcEEEEeC-CCCe-------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 255 RIYCSGSKDGDIKIWDG-VSSK-------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~-~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
..++.|..+|.|+-.-. ..+. .+..+.....+.+|..|.+++++.+|+.++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 34667888887653322 2211 1222322222357899999999999999998876654
No 371
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=38.58 E-value=17 Score=29.86 Aligned_cols=55 Identities=11% Similarity=0.131 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCC----CCCchHHHHHHHhhhccCccccc
Q psy15157 18 EALYRLIISQLYYDGHHPMAITLQSSCNVVEP----CPPSDRLSQLVHIGLAHEPDRMK 72 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~----~~p~~~l~~l~~~~~~~~~~~~~ 72 (344)
.-||+++.++.|+.+................| ...+..+.+++.+.|...|..++
T Consensus 217 vilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (290)
T 3fpq_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY 275 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCc
Confidence 57999999999998765554444443332222 12245788999999998888775
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=37.84 E-value=1.9e+02 Score=24.58 Aligned_cols=185 Identities=10% Similarity=0.051 Sum_probs=95.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.+..++++.-....+.-..||.|..|-.+..-....-. .........+.. ....|..++.. ..+.+.-..
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~-------~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~ 176 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN-------RSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTA 176 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSS-------CCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEET
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCC-------CccCcCCeEecccCCCeEEEEEeC--cCeEEEEeC
Confidence 45667777666677777889999999765421111000 000111111211 12256666654 335555678
Q ss_pred CCcEEEEEcCCC-cc-----cc--ceeee--ccccceEEEEEecCCCEEEEEeCCCEEEEEcC-----------------
Q psy15157 200 DKTVKMFDYSKS-SV-----RK--AHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS----------------- 252 (344)
Q Consensus 200 dg~i~iwd~~~~-~~-----~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~----------------- 252 (344)
||.|+.|-.... ++ .. ..... .....+..++......+.++-..++.+..|-.
T Consensus 177 ~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p 256 (389)
T 3kci_A 177 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 256 (389)
T ss_dssp TSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEE
T ss_pred CCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCcccc
Confidence 999999975431 10 00 00000 11233555554433356666677888888710
Q ss_pred ------C----------CCEEEEEeCCCcEEEEeCCCC-----------eEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 253 ------D----------GRIYCSGSKDGDIKIWDGVSS-----------KCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 253 ------~----------~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
. ....+.-..||.|+.|-.... .....+. ...+..|..|+.- ....+.-.
T Consensus 257 ~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~-~l~~~~v~~ia~G--~~h~~al~ 333 (389)
T 3kci_A 257 MKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ-GLQGKKVIAIATG--SLHCVCCT 333 (389)
T ss_dssp EECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG-GGTTCCEEEEEEC--SSEEEEEE
T ss_pred EEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEec-cCCCCCEEEEEec--cCeEEEEC
Confidence 1 122233457889999964321 1111121 1122346666654 34555567
Q ss_pred CCCcEEEEEcCC
Q psy15157 306 KDSLVKLWELSS 317 (344)
Q Consensus 306 ~dg~i~vwd~~~ 317 (344)
.||.|+.|-...
T Consensus 334 ~~G~v~~wG~n~ 345 (389)
T 3kci_A 334 EDGEVYTWGDND 345 (389)
T ss_dssp TTCCEEEEECCT
T ss_pred CCCCEEEeeCCC
Confidence 899999997653
No 373
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=37.39 E-value=1.6e+02 Score=23.72 Aligned_cols=162 Identities=9% Similarity=-0.085 Sum_probs=80.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.|..++..... .++. . ||.|..|-.+...... .+ ......|..++.......++ . |
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg--------------~p----~~~~~~i~~ia~G~~hs~~l--~-~ 80 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLT--------------MP----AATQSGVDAIAAGNYHSLAL--K-D 80 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTS--------------CC----GGGGSCCCEEEECSSEEEEE--E-T
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCC--------------CC----ccCCCCEEEEEeCCCEEEEE--E-C
Confidence 56666665432 2333 4 8999999865321110 00 01123566666654433333 4 8
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------------CCCEEEE
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS---------------------DGRIYCS 259 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~---------------------~~~~l~~ 259 (344)
|.|..|-........... .-...|..++... .+.++-+ ++.+..|-. .....+.
T Consensus 81 G~v~~wG~n~~Gqlg~P~--~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~ 155 (282)
T 3qhy_B 81 GEVIAWGGNEDGQTTVPA--EARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA 155 (282)
T ss_dssp TEEEEEECCTTSTTCCCG--GGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE
T ss_pred CEEEEeeCCCCCCCCCCc--ccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE
Confidence 999999865432111110 1123455555433 3334444 788888721 1112222
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
-. ||.+..|-......+..-. .. ...|..++.-.+. .++. .||.|+.|-...
T Consensus 156 l~-~G~v~~wG~n~~gqlg~p~-~~-~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 156 VK-NGGVIAWGDNYFGQTTVPA-EA-QSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EE-TTEEEEEECCTTSTTSCCG-GG-GSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred EE-CCEEEEecCCCCCCCCCce-ec-CCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 23 7888888754322111100 11 1247777765332 2333 589999997644
No 374
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=36.02 E-value=39 Score=27.82 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=37.8
Q ss_pred HHHHHHHH-HHHhhCCcH--HHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLII-SQLYYDGHH--PMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~-~~l~~~~~~--~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++. +..|+.+.. ++...+.....+..|..-+..+.+++.+.|...|..++.
T Consensus 218 vvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs 276 (299)
T 4asz_A 218 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKN 276 (299)
T ss_dssp HHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcC
Confidence 56788886 788888854 333444333223334344678999999999999988763
No 375
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=34.84 E-value=39 Score=27.96 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=37.2
Q ss_pred HHHHHHHH-HHHhhCCcH--HHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLII-SQLYYDGHH--PMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~-~~l~~~~~~--~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++. +..|+.+.. ++...+.....++.|..-+..+.+++.+.|...|..++.
T Consensus 235 vvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs 293 (308)
T 4gt4_A 235 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPR 293 (308)
T ss_dssp HHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcC
Confidence 46778886 678888753 344444433223333344678999999999999987763
No 376
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=34.75 E-value=99 Score=28.88 Aligned_cols=69 Identities=14% Similarity=0.219 Sum_probs=44.7
Q ss_pred CeEEEEEc----CCCC--EEEEEeCCCcEE-EEEcCCCc-------cccceeeeccccceEEEEEecCCCEEEEEeCCCE
Q psy15157 181 EVTCLEFH----PSAP--ILASGSKDKTVK-MFDYSKSS-------VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246 (344)
Q Consensus 181 ~v~~~~~~----~~~~--~l~s~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 246 (344)
..+.|+.. .+++ .+..|+.+|.|. +.-..... .+..+.......+|..|.+++++.+|++++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 34555542 3443 677899999876 33222211 1122223345678899999999999999999999
Q ss_pred EEE
Q psy15157 247 LRL 249 (344)
Q Consensus 247 i~~ 249 (344)
+++
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 377
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=33.68 E-value=38 Score=28.74 Aligned_cols=57 Identities=18% Similarity=0.103 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhhCCcHHHHHHHH--hhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 17 QEALYRLIISQLYYDGHHPMAITLQ--SSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~~a~~~~--~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
-.-||+++.++.++.+........+ ...-+..+..-+..+.+++.+.|...|..++.
T Consensus 212 GvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 270 (350)
T 4b9d_A 212 GCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270 (350)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcC
Confidence 3678999999999998654332222 21111222233678899999999999887763
No 378
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=33.35 E-value=1.2e+02 Score=27.80 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=40.0
Q ss_pred EEEEEeCCCcEEEEEcCCCc----c--ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 193 ILASGSKDKTVKMFDYSKSS----V--RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~----~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.+..|+.+|.|.-.-+.... . ...+.......+|..+.++++..+|++++.++.+++-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 67789999998754433221 1 1111111345678999999999999999999999885
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=33.08 E-value=55 Score=29.67 Aligned_cols=59 Identities=20% Similarity=0.283 Sum_probs=36.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCC----eEEeeecccCCCccEE-EEEEccCCCEEEEEeCCCcEEE
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSS----KCVATFSKAHDGAEIS-SLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~v~-~i~~~~~~~~l~s~~~dg~i~v 312 (344)
-..++.|..+|.|.-..+... ..+..+.....+.+|. .+.+++++.+|++++.++.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 345667888887654443221 1222332222234675 8999999999999987776554
No 380
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=32.81 E-value=1.3e+02 Score=27.49 Aligned_cols=58 Identities=10% Similarity=0.152 Sum_probs=35.6
Q ss_pred CEEEEEeCCCcEEEE-eCCCC----e-EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 255 RIYCSGSKDGDIKIW-DGVSS----K-CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 255 ~~l~~~~~dg~i~iw-d~~~~----~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
..++.|+.+|.|+-. ....+ . .+..+.......+|..+.++++..+|+.++.++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 456778888887633 22222 1 1222321122357899999999999998887765554
No 381
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=31.77 E-value=2.2e+02 Score=23.47 Aligned_cols=176 Identities=11% Similarity=0.066 Sum_probs=96.6
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
++..++++.+.+|.|+--.+........ ...+.....+.. .+.+..+........++..+..|.++-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~---------~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~ 75 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGT---------GGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINA 75 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCS---------SCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEG
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcccc---------CCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEH
Confidence 4567889999999999887653211000 000111111222 234445555545556777788898877765
Q ss_pred CCCc---------c-ccceeeeccccceEEEEEec---CCCEEEEEeCCCEEEEE-------------------------
Q psy15157 209 SKSS---------V-RKAHKTIQESTFVRCLSFHP---CGDYMVVGTDHFVLRLY------------------------- 250 (344)
Q Consensus 209 ~~~~---------~-~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~i~~~------------------------- 250 (344)
..-. . ...+.. .....|..+...+ ...+++..+.+|.++..
T Consensus 76 ~~ip~~~r~~~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv 154 (312)
T 1suu_A 76 YEIKDSSRASKGQNISELINL-GDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVT 154 (312)
T ss_dssp GGSCC-------CBGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEE
T ss_pred HHCCCCCccCCCcChhhccCC-CCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEE
Confidence 3210 0 011221 2233444443332 46778888888877764
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCC-------CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVS-------SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
...+..++..+.+|.+..+.... ..-+..+... .+..|.++....++..|++.+..|..+..++.
T Consensus 155 ~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 155 SAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 12234566778888877776532 1112222211 23356676665566778888999998888874
No 382
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=30.23 E-value=47 Score=27.78 Aligned_cols=56 Identities=7% Similarity=0.087 Sum_probs=37.8
Q ss_pred HHHHHHHH-HHHhhCCcH--HHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLII-SQLYYDGHH--PMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~-~~l~~~~~~--~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++. +..|+.+.. .+...+.....+..|..-+..+.+++.+.|...|..++.
T Consensus 248 vvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs 306 (329)
T 4aoj_A 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS 306 (329)
T ss_dssp HHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcC
Confidence 56788887 788888753 333444433333444444678999999999999987763
No 383
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=29.69 E-value=2.5e+02 Score=23.61 Aligned_cols=27 Identities=11% Similarity=0.005 Sum_probs=16.6
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEE
Q psy15157 180 EEVTCLEFHPS--APILASGSKDKTVKMF 206 (344)
Q Consensus 180 ~~v~~~~~~~~--~~~l~s~~~dg~i~iw 206 (344)
..|.++++.|. ...+..++..+.|...
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 35788999873 4455555555655444
No 384
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.78 E-value=1.6e+02 Score=26.50 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=43.0
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCC-c--cccceeeeccccce-EEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 181 EVTCLEFHPS--APILASGSKDKTVKMFDYSKS-S--VRKAHKTIQESTFV-RCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 181 ~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~--~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
..+.|+.... ...+..|+.+|.|.-.-+... . ....+.. ....+| ..+.++++..+|++++..+.+++-
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 4666666542 236678999999875554321 1 1222222 344566 478888888888888877777764
No 385
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=27.62 E-value=1.8e+02 Score=27.10 Aligned_cols=57 Identities=7% Similarity=0.169 Sum_probs=36.3
Q ss_pred EEEEEeCCCcEE-EEeCCCCe-EEeeecccCCCccEEEEEEccCC--CEEEEEeCCCcEEE
Q psy15157 256 IYCSGSKDGDIK-IWDGVSSK-CVATFSKAHDGAEISSLTFTRNG--KYLLSSGKDSLVKL 312 (344)
Q Consensus 256 ~l~~~~~dg~i~-iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~--~~l~s~~~dg~i~v 312 (344)
.++.|..+|.|. +....... .+..+.....+.+|..+.++++. .+|++++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 677888998864 33433332 22222222233578899999988 89999988776654
No 386
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.36 E-value=3.8e+02 Score=24.52 Aligned_cols=67 Identities=9% Similarity=0.149 Sum_probs=41.3
Q ss_pred CeEEeeecccCCCccEEEEEEccC--CCEEEEEeCCC----cEEEEEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRN--GKYLLSSGKDS----LVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
|+.+......|. ..+....|.|+ |-.++.+.+++ -..+.|.++|+.+..+.+....++...--+.++
T Consensus 352 G~~L~st~~gHG-Da~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 352 GKGMYSTGLGHG-DALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp SCEEEECSCCCC-SCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCEeeeCCCCCC-CeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 333333333443 34666678886 44666665542 345688999999988877667777766554443
No 387
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=25.64 E-value=50 Score=27.34 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhhCCcHH---HHHHHHhhcCCC-CC---CCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLIISQLYYDGHHP---MAITLQSSCNVV-EP---CPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~---~a~~~~~~~~~~-~~---~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++.+..|+.+... +...+......+ .+ ..-+..+.+++.+.|...|..++.
T Consensus 225 vvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 287 (307)
T 3omv_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCC
T ss_pred HHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcC
Confidence 678999999999987533 333333322211 11 112567899999999999987763
No 388
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=24.87 E-value=3e+02 Score=22.86 Aligned_cols=174 Identities=11% Similarity=0.038 Sum_probs=85.1
Q ss_pred CceEEE-EECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 120 SPCRAG-AFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 120 ~~v~~~-~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
..|..+ .+.. +..+++.++.+|.++--.+....... ..+.....+.. .+.+..+........++.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~-----------r~G~~~i~lke-~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNR-----------SGGIVAVNLRD-NDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCC-----------SSCEESCBCCT-TCCEEEEEEECTTCEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccc-----------cCceEEEEECC-CCEEEEEEEecCCCEEEE
Confidence 445444 4442 57799999999999998876421110 11111222333 345555555555567777
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC---
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS--- 273 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~--- 273 (344)
.+.+|.+..+.....+. .... .....+..+.+.++...+.+..- ..+..++..+..|.++.-.+..
T Consensus 163 ~T~~G~~~rf~~~~~ei-p~~g--r~a~Gv~~i~L~~~d~Vv~~~~~--------~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 163 VSANGQSIRFSATDEAL-RPMG--RATSGVQGMRFNIDDRLLSLNVV--------REGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp EETTSEEEEEECCTTTS-CCCC--TTSBCEESSCCCTTCCEEEEEEC--------CTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred EECCCeEEEEECccccc-CcCC--cCCCCeeeecCCCCCEEEEEEEE--------CCCCEEEEEeCCCcEEEEEHHHccc
Confidence 88899998888762111 1110 01111222222222221111110 1234555667777776665321
Q ss_pred ----CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 274 ----SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 274 ----~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++-+..+.....+..+..+....+...++..+.+|.+.-++..
T Consensus 232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 1222222211111234444444444566666777777666653
No 389
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.73 E-value=4.3e+02 Score=24.67 Aligned_cols=119 Identities=8% Similarity=0.146 Sum_probs=65.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeec-----cccceEEEEEecCCCEEEEEeCCCEEEEEcCCC
Q psy15157 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-----ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG 254 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 254 (344)
..|.++.-..++.+.+ |+ ++-+..+|..+++... +.... ....|.++...++|.
T Consensus 373 ~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~------------------ 431 (758)
T 3ott_A 373 NRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIH-YNIVDNTGTYNTNWTYYIFEDTAGQ------------------ 431 (758)
T ss_dssp SCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEE-EEEECCC--CBSSSEEEEEECTTSE------------------
T ss_pred CceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEE-eecCCCcCCCCCceEEEEEEcCCCC------------------
Confidence 4588888887776544 44 4568889987754321 11101 112355555444332
Q ss_pred CEEEEEeCCCcEEEEeCCC------CeEE--eee--cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 255 RIYCSGSKDGDIKIWDGVS------SKCV--ATF--SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~------~~~~--~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
|..|+..+-+.++|..+ .... ..+ ...-....|.++..+++|++-+.++..+-|..+|..+++..
T Consensus 432 --lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 432 --LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVT 506 (758)
T ss_dssp --EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEE
T ss_pred --EEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceE
Confidence 22455555566676432 1111 011 11112235899999988886654444455888998877544
No 390
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.12 E-value=1.7e+02 Score=19.72 Aligned_cols=12 Identities=8% Similarity=0.365 Sum_probs=5.5
Q ss_pred EEEccCCCEEEE
Q psy15157 292 LTFTRNGKYLLS 303 (344)
Q Consensus 292 i~~~~~~~~l~s 303 (344)
+.+..+|++++.
T Consensus 61 l~l~~dGNLVl~ 72 (113)
T 3mez_B 61 MRLGHSGELDIT 72 (113)
T ss_dssp EEECTTSCEEEE
T ss_pred EEEeCCCcEEEE
Confidence 344445554443
No 391
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=24.10 E-value=1.6e+02 Score=19.52 Aligned_cols=16 Identities=13% Similarity=0.301 Sum_probs=10.9
Q ss_pred EEEEEccCCCEEEEEe
Q psy15157 290 SSLTFTRNGKYLLSSG 305 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~ 305 (344)
..+.+.++|++++-+.
T Consensus 85 ~~l~L~ddGNlVly~~ 100 (105)
T 4h3o_A 85 YILILQDDGNVIIYGS 100 (105)
T ss_dssp EEEEECTTSCEEEEES
T ss_pred EEEEEeCCCeEEEECC
Confidence 3456777888877653
No 392
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.33 E-value=2.9e+02 Score=22.19 Aligned_cols=177 Identities=11% Similarity=-0.058 Sum_probs=94.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~ 198 (344)
+.+..+.......+++.-+.+|.++--.+...... ....+ + .....|..+.... +...++..+
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~-------------~~~~l--l-~~~e~i~~v~~~~~~~~~~v~~T 87 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQG-------------SKVSL--K-SREEKIVGAFIREKFGNRLLLAT 87 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTS-------------EECCC--S-STTCCEEEEEEGGGSCSEEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccC-------------ccccc--C-CCCCEEEEEECCcCCCCEEEEEe
Confidence 34555544444555666667787664433211000 00001 2 2344566654421 456899999
Q ss_pred CCCcEEEEEcCCCc----cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 199 KDKTVKMFDYSKSS----VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
.+|.++-..+..-. -...+.. .....+..+........++..+..|.+..+
T Consensus 88 ~~G~iKr~~l~~~~~~~~G~~~i~l-kegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d 166 (276)
T 3no0_A 88 KKGYVKKIPLAEFEYKAQGMPIIKL-TEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKND 166 (276)
T ss_dssp TTSEEEEEEGGGTTTCSTTEECSCC-CTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTC
T ss_pred CCCEEEEEEHHHhhhhcCCeEEEec-CCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCC
Confidence 99999999876532 0111221 234456555555566788888888887766
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCC-------CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE--EE
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVS-------SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL--WE 314 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v--wd 314 (344)
-.++..++..+..|.++...+.. ++-+..+. .+..+..+....+...++..+.+|.+.. ++
T Consensus 167 ~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~---~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~ 243 (276)
T 3no0_A 167 ETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG---TKDTLVDLIPIKEEVELLITTKNGKAFYDKIN 243 (276)
T ss_dssp CEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC---SSSCEEEEEEESSEEEEEEEETTSCEEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc---CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeC
Confidence 12234566677777777666422 22222231 1223444433333445666677777776 76
Q ss_pred cC
Q psy15157 315 LS 316 (344)
Q Consensus 315 ~~ 316 (344)
..
T Consensus 244 ~~ 245 (276)
T 3no0_A 244 QK 245 (276)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 393
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=22.79 E-value=89 Score=24.60 Aligned_cols=55 Identities=15% Similarity=0.262 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhCCcHHHHHHHHhhcCC---CCCCCCchHHHHHHHhhhccCccccc
Q psy15157 18 EALYRLIISQLYYDGHHPMAITLQSSCNV---VEPCPPSDRLSQLVHIGLAHEPDRMK 72 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~~a~~~~~~~~~---~~~~~p~~~l~~l~~~~~~~~~~~~~ 72 (344)
.-+|+++.++.++.+.............. ..+..-+..+.+++.+.+...|..++
T Consensus 202 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 259 (271)
T 3dtc_A 202 VLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRP 259 (271)
T ss_dssp HHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCc
Confidence 55788888888888865544443332222 22233357899999999988888775
No 394
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=22.71 E-value=78 Score=26.11 Aligned_cols=55 Identities=11% Similarity=0.191 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhCCcHHH--HHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLIISQLYYDGHHPM--AITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~~--a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++.+++|+.+.... ...+... .+..|..-+..+.+++.+.|...|..+..
T Consensus 214 vilyemltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~t 270 (304)
T 3ubd_A 214 VLMFEMLTGTLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRMLFKRNPANRLG 270 (304)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHHcC-CCCCCCcCCHHHHHHHHHHcccCHHHCCC
Confidence 5789999999999986433 2222221 22233333668899999999999887764
No 395
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=22.11 E-value=67 Score=27.18 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=38.9
Q ss_pred HHHHHHHH-HHHhhCCc---HHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccc
Q psy15157 18 EALYRLII-SQLYYDGH---HPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73 (344)
Q Consensus 18 ~~l~~~~~-~~l~~~~~---~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~ 73 (344)
.-||+++. +..|+.+. ..+...+.....+..|..-+..+.+++.+.|...|..++.
T Consensus 275 v~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt 334 (353)
T 4ase_A 275 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 334 (353)
T ss_dssp HHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcC
Confidence 45778875 78888774 3445555554444444444678999999999999987763
No 396
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=21.15 E-value=94 Score=24.37 Aligned_cols=55 Identities=18% Similarity=0.296 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhCCcHHHHHHHHh---hcCCCCCCCCchHHHHHHHhhhccCccccc
Q psy15157 18 EALYRLIISQLYYDGHHPMAITLQS---SCNVVEPCPPSDRLSQLVHIGLAHEPDRMK 72 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~~a~~~~~---~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~ 72 (344)
.-+|+++.++.++.+.......... ...+..|..-+..+.+++.+.+...|..++
T Consensus 199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (271)
T 3kmu_A 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRP 256 (271)
T ss_dssp HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 4678888888888876443322222 222233333467899999999988888765
No 397
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.05 E-value=3.9e+02 Score=22.40 Aligned_cols=22 Identities=9% Similarity=0.185 Sum_probs=13.6
Q ss_pred cCCeEEEEEcC--CCCEEEEEeCCC
Q psy15157 179 IEEVTCLEFHP--SAPILASGSKDK 201 (344)
Q Consensus 179 ~~~v~~~~~~~--~~~~l~s~~~dg 201 (344)
...|.+|++.| .+.+++ ++..|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g 77 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTG 77 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC-
T ss_pred CCceEEEEECCCCCCeEEE-EecCC
Confidence 35689999998 444444 44444
Done!