Your job contains 1 sequence.
>psy15157
MSEQNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLV
HIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKS
PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE
EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV
GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY
LLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15157
(344 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039867 - symbol:CstF-50 "CstF-50" species:7227 "D... 637 6.2e-91 2
UNIPROTKB|Q05048 - symbol:CSTF1 "Cleavage stimulation fac... 609 3.9e-89 2
MGI|MGI:1914587 - symbol:Cstf1 "cleavage stimulation fact... 609 1.3e-88 2
RGD|1309267 - symbol:Cstf1 "cleavage stimulation factor, ... 609 1.3e-88 2
WB|WBGene00000773 - symbol:cpf-1 species:6239 "Caenorhabd... 592 3.5e-88 2
ZFIN|ZDB-GENE-030131-2958 - symbol:cstf1 "cleavage stimul... 610 5.0e-87 2
DICTYBASE|DDB_G0278769 - symbol:cstf1 "cleavage stimulati... 365 1.9e-57 3
TAIR|locus:2173542 - symbol:AT5G60940 "AT5G60940" species... 313 1.3e-49 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 158 5.5e-15 3
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 158 1.2e-14 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 158 1.2e-14 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 158 1.2e-14 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 158 1.2e-14 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 158 1.6e-14 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 158 3.0e-14 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 152 3.3e-14 3
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 197 1.1e-13 1
GENEDB_PFALCIPARUM|PFF1000w - symbol:PFF1000w "cleavage s... 166 6.7e-13 2
UNIPROTKB|C6KT45 - symbol:PFF1000w "Cleavage stimulation ... 166 6.7e-13 2
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 132 7.7e-13 2
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 132 7.7e-13 2
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 132 7.7e-13 2
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 132 8.1e-13 2
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 132 1.2e-12 2
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 132 1.2e-12 2
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 132 1.2e-12 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 188 2.9e-12 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 188 2.9e-12 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 126 5.8e-12 3
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 125 6.3e-12 3
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 126 6.4e-12 2
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 128 7.8e-12 2
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 128 7.8e-12 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 125 1.1e-11 3
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 127 2.5e-11 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 161 3.8e-11 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 123 4.6e-11 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 123 5.3e-11 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 178 5.9e-11 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 146 6.7e-11 2
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 123 7.3e-11 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 142 2.0e-10 2
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 125 2.2e-10 2
WB|WBGene00013143 - symbol:Y53C12B.1 species:6239 "Caenor... 144 2.4e-10 2
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 125 2.8e-10 3
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 136 3.3e-10 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 127 3.9e-10 2
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 124 4.0e-10 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 132 5.1e-10 3
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 137 5.2e-10 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 128 5.3e-10 3
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 168 5.7e-10 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 166 6.8e-10 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 166 7.3e-10 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 155 7.6e-10 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 157 7.7e-10 2
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 169 8.7e-10 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 127 1.0e-09 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 155 1.3e-09 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 155 1.3e-09 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 155 1.3e-09 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 155 1.3e-09 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 155 1.3e-09 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 155 1.3e-09 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 155 1.3e-09 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 155 1.3e-09 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 155 1.3e-09 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 124 1.3e-09 3
FB|FBgn0261119 - symbol:Prp19 "Prp19" species:7227 "Droso... 130 2.1e-09 2
TAIR|locus:2051094 - symbol:MAC3B "MOS4-associated compl... 121 2.8e-09 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 152 2.9e-09 2
TAIR|locus:2018319 - symbol:MAC3A "AT1G04510" species:370... 114 3.3e-09 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 121 3.4e-09 2
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 164 3.4e-09 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 161 3.8e-09 2
SGD|S000003648 - symbol:MDV1 "Peripheral protein of cytos... 161 4.2e-09 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 147 4.2e-09 1
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 163 4.2e-09 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 108 4.3e-09 3
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 164 4.4e-09 1
UNIPROTKB|Q5R9T6 - symbol:WDR55 "WD repeat-containing pro... 108 4.9e-09 3
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 154 6.1e-09 2
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 155 6.3e-09 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 147 6.7e-09 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 149 7.4e-09 3
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 130 9.1e-09 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 155 9.4e-09 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 115 1.1e-08 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 121 1.5e-08 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 121 1.8e-08 2
WB|WBGene00010631 - symbol:cash-1 species:6239 "Caenorhab... 159 1.9e-08 1
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 139 2.2e-08 2
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 150 2.4e-08 2
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 150 2.4e-08 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 132 2.8e-08 3
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 146 3.0e-08 2
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 155 3.3e-08 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 133 3.9e-08 2
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 148 4.2e-08 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 124 4.3e-08 3
WARNING: Descriptions of 421 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 637 (229.3 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 134/247 (54%), Positives = 167/247 (67%)
Query: 4 QNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIG 63
++E + +++ +E LYRL+ISQL YDG A+ L S + C PS+RL ++ G
Sbjct: 2 RDEILDPSNLVKNREILYRLMISQLMYDGLEKFAMEL-SMLVKADQCAPSERLLHVMIAG 60
Query: 64 LAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCR 123
+ D+ K ++L PG+DLEFE + APEP YETAYVTSHK CR
Sbjct: 61 MQTLSDKDKTNS--------DDVL--PGIDLEFEPEASALAPEPHSYETAYVTSHKQACR 110
Query: 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183
AGAFS DG L ATGSVDASIKILDV+RMLAKS+ E EP +QQGHPVIRTLYDH +EV+
Sbjct: 111 AGAFSCDGSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVS 170
Query: 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD 243
LEFHP ILAS S+D TVK+FD +K SV+KAHK + V CLSFHP GDY+ +GT+
Sbjct: 171 YLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTE 230
Query: 244 HFVLRLY 250
H VLR+Y
Sbjct: 231 HNVLRVY 237
Score = 289 (106.8 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 55/91 (60%), Positives = 68/91 (74%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS G++Y +GS DGDIKIWDG+S +C+ T ++AH GA I SL FTRNGKYLLSSG DSL
Sbjct: 263 YSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSL 322
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
V LWEL ++R + YTGAG+ G+Q T V
Sbjct: 323 VYLWELCTSRPIQTYTGAGTTGKQEHQTEAV 353
Score = 90 (36.7 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 31/145 (21%), Positives = 59/145 (40%)
Query: 99 DVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME 158
D++P + + H F + A+ S D ++K+ D+ AK S++
Sbjct: 146 DIEPGREQQGHPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDI----AKPSVK 201
Query: 159 SSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR-KAH 217
+ H V + E V CL FHP+ +A G++ ++++D + + A
Sbjct: 202 KA--------HKV----FTDCEPVLCLSFHPTGDYVAIGTEHNVLRVYDVATTQCFVSAI 249
Query: 218 KTIQESTFVRCLSFHPCGDYMVVGT 242
+ Q V C+ + P G G+
Sbjct: 250 PSQQHKAGVTCVKYSPTGKLYATGS 274
Score = 74 (31.1 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 260 GSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
G++ ++++D +++C V+ A ++ + ++ GK + D +K+W+ S
Sbjct: 228 GTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISG 287
Query: 319 RCL--IAYTGAGSMGQQFELT 337
RC+ IA G+ E T
Sbjct: 288 RCINTIAEAHGGAAICSLEFT 308
Score = 41 (19.5 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 269 WDGVSSKCVATF-SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
W+ + C T S H+G + +T + NG L+ D + W
Sbjct: 374 WNSRNG-CRLTLNSLGHNGP-VRYITHSPNGPAFLTCSDDFRARFW 417
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 609 (219.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
Score = 300 (110.7 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 53/91 (58%), Positives = 69/91 (75%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
Y+S +Y +GSKDG IK+WDGVS++C+ TF KAHDGAE+ S F++N KY+LSSGKDS+
Sbjct: 270 YNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSV 329
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 330 AKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
Score = 69 (29.3 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDS 308
+ G G++ ++++D + +C + + + I S+ + + ++ KD
Sbjct: 225 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDG 284
Query: 309 LVKLWELSSARCLIAYTGA 327
+KLW+ S RC+ + A
Sbjct: 285 CIKLWDGVSNRCITTFEKA 303
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 609 (219.4 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
Score = 295 (108.9 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 52/91 (57%), Positives = 68/91 (74%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
Y+ +Y +GSKDG IK+WDGVS++C+ TF KAHDGAE+ S F++N KY+LSSGKDS+
Sbjct: 270 YNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSV 329
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 330 AKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
Score = 68 (29.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDS 308
+ G G++ ++++D + +C + + + I S+ + + ++ KD
Sbjct: 225 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDG 284
Query: 309 LVKLWELSSARCLIAYTGA 327
+KLW+ S RC+ + A
Sbjct: 285 CIKLWDGVSNRCITTFEKA 303
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 609 (219.4 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
Score = 295 (108.9 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 52/91 (57%), Positives = 68/91 (74%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
Y+ +Y +GSKDG IK+WDGVS++C+ TF KAHDGAE+ S F++N KY+LSSGKDS+
Sbjct: 270 YNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSV 329
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 330 AKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
Score = 68 (29.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDS 308
+ G G++ ++++D + +C + + + I S+ + + ++ KD
Sbjct: 225 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDG 284
Query: 309 LVKLWELSSARCLIAYTGA 327
+KLW+ S RC+ + A
Sbjct: 285 CIKLWDGVSNRCITTFEKA 303
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 592 (213.5 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 123/256 (48%), Positives = 172/256 (67%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSS--CNVVEPCPPSDRLSQLVHIG--LAHEPD 69
++ +E +YRLII QL+YDGH +A+ L ++ C+ P PPSD+L +LV I +PD
Sbjct: 5 IKDREYMYRLIIGQLFYDGHQQIAVNLANTLGCSAPAP-PPSDKLFRLVTIAKQFVEDPD 63
Query: 70 RMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI 129
K E S +P+Q + GLDLE+++DV P + EP++YET Y+T HK+PCRA AF+
Sbjct: 64 -YKAEEKS---SPMQFEPVSSGLDLEYDADVQPVSSEPSEYETIYLTVHKAPCRAAAFNS 119
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGH-PVIRTLYDHIEEVTCLEFH 188
DG L ATGS D SIKI+DV+R+LA+ +N H PVIRTLYDH+++V + FH
Sbjct: 120 DGSLVATGSADCSIKIMDVERILAREKEHREMNENGPDAHHPVIRTLYDHVDDVNTVIFH 179
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P IL SGS DKTVK+FD+SK++V+KA KT+ E VR LS HP G++++V TDH +R
Sbjct: 180 PRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVR 239
Query: 249 LYSSD-GRIYCSGSKD 263
LY+ + + Y S + D
Sbjct: 240 LYNIETAQAYASANPD 255
Score = 308 (113.5 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 54/84 (64%), Positives = 68/84 (80%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS + R+Y + SKDG +KIWDGVS++CV TF +AHDG+ I S FT+NGKY+L+SG DS+
Sbjct: 267 YSENARLYVTASKDGHVKIWDGVSNRCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSI 326
Query: 310 VKLWELSSARCLIAYTGAGSMGQQ 333
VKLWELS+ RCLI YTGAG+ G Q
Sbjct: 327 VKLWELSTNRCLIVYTGAGATGAQ 350
Score = 60 (26.2 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327
++ + ++ N + +++ KD VK+W+ S RC+ + A
Sbjct: 262 VTDVHYSENARLYVTASKDGHVKIWDGVSNRCVETFKRA 300
>ZFIN|ZDB-GENE-030131-2958 [details] [associations]
symbol:cstf1 "cleavage stimulation factor, 3'
pre-RNA, subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-2958 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000234077 HOVERGEN:HBG051144 EMBL:BC066520
IPI:IPI00481543 UniGene:Dr.78498 ProteinModelPortal:Q6NYN6
STRING:Q6NYN6 PRIDE:Q6NYN6 InParanoid:Q6NYN6 ArrayExpress:Q6NYN6
Bgee:Q6NYN6 Uniprot:Q6NYN6
Length = 431
Score = 610 (219.8 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 123/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A +L S PS++L QL IG+ ++ ++
Sbjct: 8 LKDRQHLYKLIISQLLYDGYTNIANSLISEVKPQNVVSPSEQLMQLAKIGMENDDSAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLSFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K +QE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLLVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
Score = 279 (103.3 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 55/115 (47%), Positives = 75/115 (65%)
Query: 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
+TF +S +P + TD Y+ Y + SKDG IK+WDGVS++CV TF K
Sbjct: 247 NTFQCFVSCNPLDQH----TDTICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTFDK 302
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELT 337
AH+GAE+ S F++N KY+LS+GKDS+ KLWE+S+ R L+ YTGAG G+Q T
Sbjct: 303 AHEGAEVCSAVFSKNSKYILSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRT 357
>DICTYBASE|DDB_G0278769 [details] [associations]
symbol:cstf1 "cleavage stimulation factor 50 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278769 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006378 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0006379 KO:K14406 OMA:TKFITTH RefSeq:XP_641951.1
ProteinModelPortal:Q54XS9 EnsemblProtists:DDB0233705 GeneID:8621683
KEGG:ddi:DDB_G0278769 InParanoid:Q54XS9 ProtClustDB:CLSZ2729098
Uniprot:Q54XS9
Length = 506
Score = 365 (133.5 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 66/140 (47%), Positives = 99/140 (70%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV 171
T ++T+HK+ CR FS DG+ ATGS D SIK+LDV++M + ++ ++ PV
Sbjct: 162 TKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAPSRPV 221
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
IRT YDH + L+FHPSAPIL+S SKD T++ +DY KSS++++ K IQ++ +R ++F
Sbjct: 222 IRTFYDHTMPINDLDFHPSAPILSSASKDGTIRFYDY-KSSLKRSFKYIQDTHGIRSINF 280
Query: 232 HPCGDYMVVGTDHFVLRLYS 251
HPCGD ++ GTDH ++RLY+
Sbjct: 281 HPCGDLILAGTDHQMIRLYN 300
Score = 192 (72.6 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG I+ S SKD IKIWD + ++T + H G E +++ +RN KYLLS G+DS+
Sbjct: 325 FSLDGNIFASCSKDNTIKIWDSNNFSLISTLNSPHGGKEPTTVQISRNQKYLLSCGRDSM 384
Query: 310 VKLWELSSARCLIAY-TGAGSMGQQ 333
+KLWE++S R + + TG G Q
Sbjct: 385 IKLWEITSGRLIYSINTGVNQSGGQ 409
Score = 101 (40.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 160 SEPQNDQQGHP--VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH 217
+E QQ P + + + H C +F +A+GS D ++K+ D +K +R +
Sbjct: 148 TEKVQQQQLQPNFITKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNK--MRNYN 205
Query: 218 KTIQESTFVRCLSFHPCGDYMVVGT--DHFV----LRLYSSDGRIYCSGSKDGDIKIWDG 271
+T E+T S P V+ T DH + L + S I S SKDG I+ +D
Sbjct: 206 QTKNETTEDSAPS-RP-----VIRTFYDHTMPINDLDFHPS-APILSSASKDGTIRFYDY 258
Query: 272 VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323
SS +F D I S+ F G +L+ +++L+ +++ + A
Sbjct: 259 KSS-LKRSFKYIQDTHGIRSINFHPCGDLILAGTDHQMIRLYNVNTFQSFTA 309
Score = 63 (27.2 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 17 QEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCP 51
Q LY LII+QL +DG+ A + S + PCP
Sbjct: 5 QRDLYSLIINQLVHDGYLNEATKISESTMI--PCP 37
Score = 56 (24.8 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
H I+ + F+ +G S KD+ +K+W+
Sbjct: 315 HHHGPINQVRFSLDGNIFASCSKDNTIKIWD 345
>TAIR|locus:2173542 [details] [associations]
symbol:AT5G60940 "AT5G60940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 HOGENOM:HOG000234077
KO:K14406 EMBL:AY084766 EMBL:AF515696 EMBL:AY136384 EMBL:BT000184
IPI:IPI00526744 RefSeq:NP_200902.1 UniGene:At.29134
ProteinModelPortal:Q8L4J2 SMR:Q8L4J2 IntAct:Q8L4J2 STRING:Q8L4J2
PaxDb:Q8L4J2 PRIDE:Q8L4J2 EnsemblPlants:AT5G60940.1 GeneID:836215
KEGG:ath:AT5G60940 TAIR:At5g60940 InParanoid:Q8L4J2 OMA:PWANCIV
PhylomeDB:Q8L4J2 ProtClustDB:CLSN2686712 ArrayExpress:Q8L4J2
Genevestigator:Q8L4J2 Uniprot:Q8L4J2
Length = 429
Score = 313 (115.2 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 75/202 (37%), Positives = 110/202 (54%)
Query: 52 PSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQ--EILIGPGLDLEFE-SDVDPSAPEPA 108
P +RL +LV GLA E + R S L P I ++F + S+
Sbjct: 53 PPNRLLELVAKGLAAENNGTLRGVSSSVLLPSSYGSITTPRTASIDFSVNHAKGSSKTIP 112
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168
++E+ ++ HKS R FS DG ATG D SIK+ +V ++ M S D Q
Sbjct: 113 KHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKV---KQMISG----DTQA 165
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
P+IRT YDH E + L+FHP + IL S +KD +K FD+SK++ ++A K Q++ VR
Sbjct: 166 RPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRS 225
Query: 229 LSFHPCGDYMVVGTDHFVLRLY 250
+SFHP G++++ GTDH + LY
Sbjct: 226 ISFHPSGEFLLAGTDHPIPHLY 247
Score = 221 (82.9 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 41/78 (52%), Positives = 57/78 (73%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YSS G IY + SKDG I+++DGVS+KCV + AH +E++S FT++ +++LSSGKDS
Sbjct: 274 YSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 333
Query: 310 VKLWELSSARCLIAYTGA 327
VKLWE+ S R + Y GA
Sbjct: 334 VKLWEIGSGRMVKEYLGA 351
Score = 60 (26.2 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 241 GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300
G +++ D R S KD +K+W+ S + V + A S F ++
Sbjct: 309 GKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEF 368
Query: 301 LLSSGKDSL-VKLWELSSA 318
++S + S V W+ +A
Sbjct: 369 VISIDEASNEVVTWDARTA 387
Score = 57 (25.1 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 16/94 (17%), Positives = 40/94 (42%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+ G +G+ ++D + +C + F + I+ + ++ G +++ KD
Sbjct: 228 FHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKD 287
Query: 308 SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
++L++ SA+C+ + A + T D
Sbjct: 288 GAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKD 321
Score = 42 (19.8 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 11/52 (21%), Positives = 24/52 (46%)
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316
++ WD ++ VA + H+GA + + ++ G D ++ W+ S
Sbjct: 378 EVVTWDARTADKVAKWPSNHNGAP-RWIEHSPVESVFVTCGIDRSIRFWKES 428
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 158 (60.7 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 153 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 211
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 212 LKLWDYSKGKCLKTYTG 228
Score = 127 (49.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 111 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 168
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 169 CRIWDTASGQCL 180
Score = 113 (44.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 126
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 127 VRIWDVKTGKCL 138
Score = 96 (38.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 196 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 253
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 254 DNLVYIWNLQT 264
Score = 83 (34.3 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSF 231
+T+ H ++ + + + +L S S DKT+K++D S K KT++ S +V C +F
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KCLKTLKGHSNYVFCCNF 111
Query: 232 HPCGDYMVVGTDHFVLRLY 250
+P + +V G+ +R++
Sbjct: 112 NPQSNLIVSGSFDESVRIW 130
Score = 79 (32.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 152
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 153 FNRDGSLIVSSSYDGLCRIWDT 174
Score = 65 (27.9 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCLSFH 232
TL H + V+ ++F P+ LAS S DK +K++ K KTI + +++
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWS 70
Query: 233 PCGDYMVVGTDHFVLRLYS-SDGR 255
+ +V +D L+++ S G+
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGK 94
Score = 49 (22.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
++ HK A+S D L + S D ++KI DV
Sbjct: 57 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 90
Score = 42 (19.8 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 102 PSAPEPAQYETAY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
P+ +P Y + + H + FS +G+ A+ S D IKI
Sbjct: 2 PTPVKP-NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI 45
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
Score = 127 (49.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 92 (37.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E++ + P P+ T + P A F++ G T +V +S+K LA SS
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGH---TKAV-SSVKFSPNGEWLASSS 64
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ +T+ H ++ + + + +L S S DKT+K++D S K
Sbjct: 65 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KC 121
Query: 217 HKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
KT++ S +V C +F+P + +V G+ +R++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 73 (30.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS S+P + + + TL H + V+ ++F P+ LAS S DK +K++
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--- 77
Query: 215 KAHKTIQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
K KTI + +++ + +V +D L+++ S G+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
Score = 127 (49.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 92 (37.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E++ + P P+ T + P A F++ G T +V +S+K LA SS
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGH---TKAV-SSVKFSPNGEWLASSS 64
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ +T+ H ++ + + + +L S S DKT+K++D S K
Sbjct: 65 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KC 121
Query: 217 HKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
KT++ S +V C +F+P + +V G+ +R++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 73 (30.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS S+P + + + TL H + V+ ++F P+ LAS S DK +K++
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--- 77
Query: 215 KAHKTIQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
K KTI + +++ + +V +D L+++ S G+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
Score = 127 (49.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 92 (37.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E++ + P P+ T + P A F++ G T +V +S+K LA SS
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGH---TKAV-SSVKFSPNGEWLASSS 64
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ +T+ H ++ + + + +L S S DKT+K++D S K
Sbjct: 65 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KC 121
Query: 217 HKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
KT++ S +V C +F+P + +V G+ +R++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 73 (30.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS S+P + + + TL H + V+ ++F P+ LAS S DK +K++
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--- 77
Query: 215 KAHKTIQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
K KTI + +++ + +V +D L+++ S G+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
Score = 127 (49.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 92 (37.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E++ + P P+ T + P A F++ G T +V +S+K LA SS
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGH---TKAV-SSVKFSPNGEWLASSS 64
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ +T+ H ++ + + + +L S S DKT+K++D S K
Sbjct: 65 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KC 121
Query: 217 HKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
KT++ S +V C +F+P + +V G+ +R++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 73 (30.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS S+P + + + TL H + V+ ++F P+ LAS S DK +K++
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--- 77
Query: 215 KAHKTIQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
K KTI + +++ + +V +D L+++ S G+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 158 (60.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
Score = 127 (49.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 91 (37.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E++ + P P+ T + P A F++ G T +V +S+K LA SS
Sbjct: 9 ETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGH---TKAV-SSVKFSPNGEWLASSS 64
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ +T+ H ++ + + + +L S S DKT+K++D S K
Sbjct: 65 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KC 121
Query: 217 HKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
KT++ S +V C +F+P + +V G+ +R++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 67 (28.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 160 SEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT 219
S+P + + + TL H + V+ ++F P+ LAS S DK +K++ K KT
Sbjct: 26 SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKT 82
Query: 220 IQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
I + +++ + +V +D L+++ S G+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 158 (60.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 206 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 264
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 265 LKLWDYSKGKCLKTYTG 281
Score = 126 (49.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 221
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 222 CRIWDTASGQCL 233
Score = 97 (39.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 249 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVT-GGKWIVSGSE 306
Query: 307 DSLVKLWELSS 317
D++V +W L S
Sbjct: 307 DNMVYIWNLQS 317
Score = 90 (36.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 48/192 (25%), Positives = 82/192 (42%)
Query: 61 HIGLAHEPDRMKRMEPSIGLNPIQEILIG-PGLDLEFESDVDPSAPEPAQYETAYVTSHK 119
H G+ H P + PS G N +Q +G PG S SA +
Sbjct: 11 HPGVVHPPQQPLPTAPS-GPNSLQPNSVGQPGATTSSNS----SASNKSSLSV------- 58
Query: 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179
P F++ G T +V A +K LA SS + +T+ H
Sbjct: 59 KPNYTLKFTLAGH---TKAVSA-VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 114
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYM 238
++ + + + +L SGS DKT+K+++ S K+ KT++ S +V C +F+P + +
Sbjct: 115 LGISDVAWSSDSRLLVSGSDDKTLKVWELSTG---KSLKTLKGHSNYVFCCNFNPQSNLI 171
Query: 239 VVGTDHFVLRLY 250
V G+ +R++
Sbjct: 172 VSGSFDESVRIW 183
Score = 78 (32.5 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---KCLKTLPAHSDPVSAVH 205
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 206 FNRDGSLIVSSSYDGLCRIWDT 227
Score = 67 (28.6 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCLSFH 232
TL H + V+ ++F P+ LAS S DK +K++ K KTI + +++
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWS 123
Query: 233 PCGDYMVVGTDHFVLRLYS-SDGR 255
+V G+D L+++ S G+
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGK 147
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 152 (58.6 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYT 325
+KLW+ S +CL YT
Sbjct: 238 LKLWDYSKGKCLKTYT 253
Score = 127 (49.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D ++IWD + KC+ T AH +S++ F R+G ++SS D L
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDP-VSAVHFNRDGSLIVSSSYDGL 194
Query: 310 VKLWELSSARCL 321
++W+ +S +CL
Sbjct: 195 CRIWDTASGQCL 206
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD + S S D +KIWD S KC+ T K H + F ++S D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDES 152
Query: 310 VKLWELSSARCL 321
V++W++ + +CL
Sbjct: 153 VRIWDVKTGKCL 164
Score = 96 (38.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ + + D +K+WD KC+ T++ H + ++ + T GK+++S +
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-CHKNEKYCIFANFSVT-GGKWIVSGSE 279
Query: 307 DSLVKLWELSS 317
D+LV +W L +
Sbjct: 280 DNLVYIWNLQT 290
Score = 83 (34.3 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSF 231
+T+ H ++ + + + +L S S DKT+K++D S K KT++ S +V C +F
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---KCLKTLKGHSNYVFCCNF 137
Query: 232 HPCGDYMVVGTDHFVLRLY 250
+P + +V G+ +R++
Sbjct: 138 NPQSNLIVSGSFDESVRIW 156
Score = 79 (32.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLS 230
++TL H V C F+P + ++ SGS D++V+++D K KT+ S V +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVH 178
Query: 231 FHPCGDYMVVGTDHFVLRLYSS 252
F+ G +V + + R++ +
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDT 200
Score = 73 (30.8 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS S+P + + + TL H + V+ ++F P+ LAS S DK +K++
Sbjct: 21 SSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--- 77
Query: 215 KAHKTIQESTF-VRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR 255
K KTI + +++ + +V +D L+++ S G+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120
Score = 49 (22.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
++ HK A+S D L + S D ++KI DV
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Score = 45 (20.9 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 104 APEPAQYETAY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AP Y + + H + FS +G+ A+ S D IKI
Sbjct: 29 APVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI 71
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 197 (74.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 63/235 (26%), Positives = 107/235 (45%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
+TSH + FS DG+L A+ S D +I+ ++ + ND PV +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTI------------NDPIAEPV-QE 66
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
H ++ + F A + S S DKT+K++D S+ K I + + C++F+P
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKT--LIGHTNYAFCVNFNPQ 124
Query: 235 GDYMVVGTDHFVLRL-----------------------YSSDGRIYCSGSKDGDIKIWDG 271
+ +V G+ +R+ ++ DG + S S DG +IWD
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 272 VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ CV T + +S + F+ NGK++L D+ ++LW +SSA+ L YTG
Sbjct: 185 GTGHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
>GENEDB_PFALCIPARUM|PFF1000w [details] [associations]
symbol:PFF1000w "cleavage stimulation factor
subunit 1-like protein, putative" species:5833 "Plasmodium
falciparum" [GO:0003723 "RNA binding" evidence=ISS] [GO:0006396
"RNA processing" evidence=ISS] [GO:0005848 "mRNA cleavage
stimulating factor complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0006396
EMBL:AL844505 GO:GO:0005848 RefSeq:XP_966191.1
ProteinModelPortal:C6KT45 IntAct:C6KT45 PRIDE:C6KT45
EnsemblProtists:PFF1000w:mRNA GeneID:3885969 KEGG:pfa:PFF1000w
EuPathDB:PlasmoDB:PF3D7_0620500 HOGENOM:HOG000281560 OMA:INDEHEN
ProtClustDB:CLSZ2444831 Uniprot:C6KT45
Length = 650
Score = 166 (63.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
DG +Y S S DG IKIWDG +SK V T AH+G I S+ F ++G Y+L++G D K+
Sbjct: 488 DGTMYSSVSDDGHIKIWDGHNSKLVHTQFNAHNGYSIESVKFNKSGFYMLTAGLDGQSKI 547
Query: 313 WELSSARCLIAYTGAG 328
W+L + + L + G G
Sbjct: 548 WDLRNFKSLFTF-GNG 562
Score = 77 (32.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD-YSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + C + + + IL SG D VK+ Y + +K + + V C+ FHP +
Sbjct: 327 HKNKCLCCDINYNNSILCSGGSDNIVKISKMYDIKNKKKIYNIDKHKGKVNCIKFHPFKN 386
Query: 237 YMVVGTDHFVLRL 249
+ G D +++
Sbjct: 387 ILFSGGDDCTIQI 399
Score = 56 (24.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/111 (19%), Positives = 46/111 (41%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
+ HK F + +G D +I+I+DV+++ + ++ + I +
Sbjct: 369 IDKHKGKVNCIKFHPFKNILFSGGDDCTIQIIDVNKIFKMKKQNYYMRKEFEETYQNI-S 427
Query: 175 LYDHIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
+ D ++ + HP L AS + +KM+D + K+ T + T
Sbjct: 428 IQDKNPYIS-MYVHPCGDFLYASNRNENILKMYDLQTLTCFKSIDTYKYHT 477
>UNIPROTKB|C6KT45 [details] [associations]
symbol:PFF1000w "Cleavage stimulation factor subunit 1-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005848 "mRNA cleavage
stimulating factor complex" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0006396 EMBL:AL844505
GO:GO:0005848 RefSeq:XP_966191.1 ProteinModelPortal:C6KT45
IntAct:C6KT45 PRIDE:C6KT45 EnsemblProtists:PFF1000w:mRNA
GeneID:3885969 KEGG:pfa:PFF1000w EuPathDB:PlasmoDB:PF3D7_0620500
HOGENOM:HOG000281560 OMA:INDEHEN ProtClustDB:CLSZ2444831
Uniprot:C6KT45
Length = 650
Score = 166 (63.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
DG +Y S S DG IKIWDG +SK V T AH+G I S+ F ++G Y+L++G D K+
Sbjct: 488 DGTMYSSVSDDGHIKIWDGHNSKLVHTQFNAHNGYSIESVKFNKSGFYMLTAGLDGQSKI 547
Query: 313 WELSSARCLIAYTGAG 328
W+L + + L + G G
Sbjct: 548 WDLRNFKSLFTF-GNG 562
Score = 77 (32.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD-YSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + C + + + IL SG D VK+ Y + +K + + V C+ FHP +
Sbjct: 327 HKNKCLCCDINYNNSILCSGGSDNIVKISKMYDIKNKKKIYNIDKHKGKVNCIKFHPFKN 386
Query: 237 YMVVGTDHFVLRL 249
+ G D +++
Sbjct: 387 ILFSGGDDCTIQI 399
Score = 56 (24.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/111 (19%), Positives = 46/111 (41%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
+ HK F + +G D +I+I+DV+++ + ++ + I +
Sbjct: 369 IDKHKGKVNCIKFHPFKNILFSGGDDCTIQIIDVNKIFKMKKQNYYMRKEFEETYQNI-S 427
Query: 175 LYDHIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
+ D ++ + HP L AS + +KM+D + K+ T + T
Sbjct: 428 IQDKNPYIS-MYVHPCGDFLYASNRNENILKMYDLQTLTCFKSIDTYKYHT 477
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 132 (51.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 111 (44.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
Score = 54 (24.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP +
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKK--VTSVVFHPSQEL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
Score = 46 (21.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++ G G D I I + + F++ H G + + F + K++ S+G D
Sbjct: 442 IFDQSGTYLALGGTDVQIYICKQWTE--ILHFTE-HSGVT-TGVAFGHHAKFIASTGMDR 497
Query: 309 LVKLWEL 315
+K + L
Sbjct: 498 SLKFYSL 504
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 132 (51.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 111 (44.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 58 (25.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP D
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKK--VTSVVFHPSQDL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 132 (51.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 111 (44.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
Score = 54 (24.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP +
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKK--VTSVVFHPSQEL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 132 (51.5 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 367 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 424
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 425 VKLWDL 430
Score = 111 (44.1 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 259 DKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRA-HESA 317
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 318 -VTGLSLHATGDYLLSSSD 335
Score = 75 (31.5 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 409 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 465
Score = 57 (25.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 308 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 367
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 368 HPDG--LIFGT 376
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS 251
+ +G DK V +FD S + K + V + FHP + + + +R++S
Sbjct: 246 ILTGGADKNVVVFDKSSEQILATLKGHTKK--VTSVVFHPSQELVFSASPDATIRIWS 301
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 132 (51.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 109 (43.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
Score = 53 (23.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP +
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKK--VTSVVFHPSQEL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 132 (51.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 109 (43.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
Score = 53 (23.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP +
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKK--VTSVVFHPSQEL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 132 (51.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 109 (43.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D+ ++ TL H ++VT + FHPS ++ S S D T++++ +S + + ES
Sbjct: 250 DKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRA-HESA 308
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ +D
Sbjct: 309 -VTGLSLHATGDYLLSSSD 326
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+S +G + + D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++ + H VT L H + L S S D+ D V + C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 232 HPCGDYMVVGT 242
HP G ++ GT
Sbjct: 359 HPDG--LIFGT 367
Score = 53 (23.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K + V + FHP +
Sbjct: 221 IPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKK--VTSVVFHPSQEL 278
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 279 VFSASPDATIRIWS 292
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 188 (71.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 56/228 (24%), Positives = 100/228 (43%)
Query: 103 SAPEPAQYET-AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE 161
SA A Y+ + H + FS G+ T S D ++KI ++D M+ + ++ +
Sbjct: 70 SASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK 129
Query: 162 -PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF--DYSKSSVRKAHK 218
ND R + ++ T F + K +F +++ S
Sbjct: 130 LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 219 TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278
+ ES + + C + +D ++ DG + SGS DG ++IWD + +C+
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
T + ++ + F+ NGKY+L+S DS +KLW+ S + L YTG
Sbjct: 250 TLVD-DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG 296
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 188 (71.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 56/228 (24%), Positives = 100/228 (43%)
Query: 103 SAPEPAQYET-AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE 161
SA A Y+ + H + FS G+ T S D ++KI ++D M+ + ++ +
Sbjct: 70 SASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK 129
Query: 162 -PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF--DYSKSSVRKAHK 218
ND R + ++ T F + K +F +++ S
Sbjct: 130 LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 219 TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278
+ ES + + C + +D ++ DG + SGS DG ++IWD + +C+
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
T + ++ + F+ NGKY+L+S DS +KLW+ S + L YTG
Sbjct: 250 TLVD-DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG 296
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ I + +H VT ++FHPS +A+ D TVK++D +
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-A 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
++ H + S V LSFHP G+Y++ + L++ +GR+
Sbjct: 217 RTHRLLQHYQLH-SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRL 263
Score = 121 (47.7 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +C+ ++ + H G ++ + F +G + ++G D+
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNT 210
Query: 310 VKLWELSSARCLIAY 324
VK+W+ + R L Y
Sbjct: 211 VKVWDARTHRLLQHY 225
Score = 113 (44.8 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D K+S H + FV + FHP
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECIHSYCEHGGFVTYVDFHP 197
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 198 SGTCIAAAGMDNTV 211
Score = 105 (42.0 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VTC+ F PS +LASGS+DKTV+++ + +S+V +AH + VR + F
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH-----TATVRSVHFCSD 114
Query: 235 GDYMVVGTDHFVLRLYSS 252
G +V +D ++++S+
Sbjct: 115 GQSLVTASDDKTVKVWST 132
Score = 98 (39.6 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + + + + H A +++L+F +G YL+++ DS
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDARTHRLLQHY-QLHSAA-VNALSFHPSGNYLITASSDST 252
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 253 LKILDLMEGRLL--YTLHGHQG 272
Score = 95 (38.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ SDG+ + S D +K+W + + FS + F+ +G+ ++S+ D
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ +S C+ +Y G
Sbjct: 169 VKLWDKTSRECIHSYCEHG 187
Score = 93 (37.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 166 QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF 225
Q+ + R H + VTC++F + LASGS D T+ ++ S +A++
Sbjct: 6 QEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS--RAYRFTGHKDA 63
Query: 226 VRCLSFHPCGDYMVVGTDHFVLRLY 250
V C++F P G + G+ +R++
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 82 (33.9 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 294
Query: 310 VKLWE 314
V +W+
Sbjct: 295 VMVWK 299
Score = 81 (33.6 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F L + S DKTVK+ +S R Q +VRC F P G
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKV--WSTHRQRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 160 IVSASDDKTVKLWDKTSR 177
Score = 54 (24.1 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS G L A+GS D +++I
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 53 (23.7 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ F DGQ T S D ++K+ R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 102 PSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
PS +P+ + H+ FS++ + A+GS+D+++ I
Sbjct: 4 PSQEDPSLER--HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMI 45
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 125 (49.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ D TVK++D +
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-T 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
++ H + S V LSFHP G+Y++ + L++ +GR+
Sbjct: 217 RTHRLVQHYQLH-SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRL 263
Score = 119 (46.9 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++G D+
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNT 210
Query: 310 VKLWELSSARCLIAY 324
VK+W+ + R + Y
Sbjct: 211 VKVWDTRTHRLVQHY 225
Score = 114 (45.2 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D K+S H + FV + FHP
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHP 197
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 198 SGTCIAAAGMDNTV 211
Score = 106 (42.4 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VTC+ F PS +LASGS+DKTV+++ + +S+V +AH + VR + F
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH-----TATVRSVHFCSD 114
Query: 235 GDYMVVGTDHFVLRLYSS 252
G +V +D ++++S+
Sbjct: 115 GQLLVTASDDKTVKVWST 132
Score = 99 (39.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + V + + H A +++L+F +G YL+++ DS
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDTRTHRLVQHY-QLHSAA-VNALSFHPSGNYLITASSDST 252
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 253 LKILDLMEGRLL--YTLHGHQG 272
Score = 98 (39.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ SDG++ + S D +K+W + + FS + F+ +G+ ++S+ D
Sbjct: 111 FCSDGQLLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ +S C+ +Y G
Sbjct: 169 VKLWDKTSRECVHSYCEHG 187
Score = 94 (38.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 164 NDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQES 223
+ Q+ + R H + VTC++F + LASGS D T+ ++ S +A++
Sbjct: 4 HSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS--RAYRFTGHK 61
Query: 224 TFVRCLSFHPCGDYMVVGTDHFVLRLY 250
V C++F P G + G+ +R++
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 85 (35.0 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F +L + S DKTVK+ +S R Q +VRC F P G
Sbjct: 102 HTATVRSVHFCSDGQLLVTASDDKTVKV--WSTHRQRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 160 IVSASDDKTVKLWDKTSR 177
Score = 82 (33.9 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 294
Query: 310 VKLWE 314
V +W+
Sbjct: 295 VMVWK 299
Score = 59 (25.8 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ F DGQL T S D ++K+ R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR 134
Score = 54 (24.1 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS G L A+GS D +++I
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 39 (18.8 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
H+ FS++ + A+GS+D+++ I
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMI 45
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ D TVK++D
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
+ + ++ S V LSFHP G+Y+V + L++ +GR+
Sbjct: 218 THRLLQHYQL--HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL 263
Score = 124 (48.7 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++G D+
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNT 210
Query: 310 VKLWELSSARCLIAY 324
VK+W++ + R L Y
Sbjct: 211 VKVWDVRTHRLLQHY 225
Score = 114 (45.2 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D K+S H + FV + FHP
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHP 197
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 198 SGTCIAAAGMDNTV 211
Score = 108 (43.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
G A SVD S+ + LA SM+S + H + VTC+ F PS
Sbjct: 17 GHRDAVTSVDFSLNT----KQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 191 APILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247
+LASGS+DKTV+++ + +S+V +AH + VR + F G V +D +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAH-----TATVRSVHFCSDGQSFVTASDDKTV 127
Query: 248 RLYSS 252
+++S+
Sbjct: 128 KVWST 132
Score = 94 (38.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + + + + H A +++L+F +G YL+++ DS
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAA-VNALSFHPSGNYLVTASSDST 252
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 253 LKILDLMEGRLL--YTLHGHQG 272
Score = 82 (33.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 237 FHPSGNYLVTASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 294
Query: 310 VKLWE 314
V +W+
Sbjct: 295 VMVWK 299
Score = 73 (30.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F + S DKTVK+ +S + Q +VRC F P G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKV--WSTHRQKFLFSLSQHINWVRCAKFSPDGRL 159
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 160 IVSASDDKTVKLWDKTSR 177
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ F DGQ T S D ++K+ R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134
Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
P+ Y A HK FS G L A+GS D +++I
Sbjct: 50 PQTRAYRFA---GHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 42 (19.8 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
PE E + H+ + FS++ + A+GS+D+ + +
Sbjct: 6 PEDPSLERHF-KGHRDAVTSVDFSLNTKQLASGSMDSCLMV 45
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 128 (50.1 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 233 PCGDYMVV----GTDHFV--LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
P DY + G DH V +R +S+ S S+DG ++IWD + CV A +
Sbjct: 187 PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATE- 245
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ I ++ + +GK+L+S G+D + +WE+SSA A G
Sbjct: 246 SWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLG 285
Score = 123 (48.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL--YS 251
L SG +D+ + +++ S + + A + F+ C F P Y + T + + +
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKAA--LLGHENFIECCVFAPPASYEHLATLAGLKKPPPAT 317
Query: 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311
S +G++D IK+W+ + + T HD + L F GKYL S D ++
Sbjct: 318 SSCEFVATGARDKTIKLWEA-RGRLIKTLH-GHDNW-VRGLVFHPGGKYLFSVSDDKTIR 374
Query: 312 LWELSS-ARCLIAYTGA 327
W+LS R + +GA
Sbjct: 375 CWDLSQEGRLVKTISGA 391
Score = 104 (41.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 139 VDASIKILDVDRMLAKSSM--ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196
++A ++ L + + S+ ++ +P N TL H + VTC+ FHP LAS
Sbjct: 72 LEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLAS 131
Query: 197 GSKDKTVKMFDYSKSSVRKAHK 218
GS+D T+K++D+ + + K
Sbjct: 132 GSEDCTIKIWDWELGEIERTLK 153
Score = 94 (38.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 256 IYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTF-TRNGKYLLSSGKDSLVKLW 313
+ S S D IK+WD + T S HD + +SS+ F T N +L+S+ +D +++W
Sbjct: 172 LLASCSSDLTIKLWDPSKDYANIRTLS-GHDHS-VSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 314 ELSSARCL 321
++S+ C+
Sbjct: 230 DVSTGFCV 237
Score = 77 (32.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
DP+ P T +TSH+ AF A+GS D +IKI D E
Sbjct: 96 DPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWD---------WELG 146
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEF--HPSAPILASGSKDKTVKMFDYSK 210
E + RTL HI V+ L++ +LAS S D T+K++D SK
Sbjct: 147 E---------IERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSK 189
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 128 (50.1 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 233 PCGDYMVV----GTDHFV--LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
P DY + G DH V +R +S+ S S+DG ++IWD + CV A +
Sbjct: 187 PSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATE- 245
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ I ++ + +GK+L+S G+D + +WE+SSA A G
Sbjct: 246 SWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLG 285
Score = 123 (48.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL--YS 251
L SG +D+ + +++ S + + A + F+ C F P Y + T + + +
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKAA--LLGHENFIECCVFAPPASYEHLATLAGLKKPPPAT 317
Query: 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311
S +G++D IK+W+ + + T HD + L F GKYL S D ++
Sbjct: 318 SSCEFVATGARDKTIKLWEA-RGRLIKTLH-GHDNW-VRGLVFHPGGKYLFSVSDDKTIR 374
Query: 312 LWELSS-ARCLIAYTGA 327
W+LS R + +GA
Sbjct: 375 CWDLSQEGRLVKTISGA 391
Score = 104 (41.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 139 VDASIKILDVDRMLAKSSM--ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196
++A ++ L + + S+ ++ +P N TL H + VTC+ FHP LAS
Sbjct: 72 LEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLAS 131
Query: 197 GSKDKTVKMFDYSKSSVRKAHK 218
GS+D T+K++D+ + + K
Sbjct: 132 GSEDCTIKIWDWELGEIERTLK 153
Score = 94 (38.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 256 IYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTF-TRNGKYLLSSGKDSLVKLW 313
+ S S D IK+WD + T S HD + +SS+ F T N +L+S+ +D +++W
Sbjct: 172 LLASCSSDLTIKLWDPSKDYANIRTLS-GHDHS-VSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 314 ELSSARCL 321
++S+ C+
Sbjct: 230 DVSTGFCV 237
Score = 77 (32.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
DP+ P T +TSH+ AF A+GS D +IKI D E
Sbjct: 96 DPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWD---------WELG 146
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEF--HPSAPILASGSKDKTVKMFDYSK 210
E + RTL HI V+ L++ +LAS S D T+K++D SK
Sbjct: 147 E---------IERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSK 189
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ D TVK++D
Sbjct: 189 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
+ + ++ S V LSFHP G+Y+V + L++ +GR+
Sbjct: 249 THRLLQHYQL--HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL 294
Score = 123 (48.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++G D+
Sbjct: 184 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGF-VTYVDFHPSGTCVAAAGMDNT 241
Query: 310 VKLWELSSARCLIAY 324
VK+W++ + R L Y
Sbjct: 242 VKVWDVRTHRLLQHY 256
Score = 114 (45.2 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D K+S H + FV + FHP
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHP 228
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 229 SGTCVAAAGMDNTV 242
Score = 104 (41.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VTC+ F PS +LASGS+DKTV+++ + +S+V +AH + VR + F
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAH-----TATVRSVHFCSD 145
Query: 235 GDYMVVGTDHFVLRLYSS 252
G V +D ++++S+
Sbjct: 146 GQSFVTASDDKTIKVWST 163
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ SDG+ + + S D IK+W K + + S+ + + F+ +G+ ++S+ D
Sbjct: 142 FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAK--FSPDGRLIVSASDDKT 199
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ +S C+ +Y G
Sbjct: 200 VKLWDKTSRECVHSYCEHG 218
Score = 94 (38.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + + + + H A +++L+F +G YL+++ DS
Sbjct: 226 FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHSAA-VNALSFHPSGNYLVTASSDST 283
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 284 LKILDLMEGRLL--YTLHGHQG 303
Score = 86 (35.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ 221
PQ D + R H + VTC++F + LASGS D + ++ S +A++
Sbjct: 36 PQEDPS---LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS--RAYRFTG 90
Query: 222 ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
V C++F P G + G+ +R++
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIW 119
Score = 82 (33.9 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 268 FHPSGNYLVTASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 325
Query: 310 VKLWE 314
V +W+
Sbjct: 326 VMVWK 330
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F + S DKT+K+ +S + Q +VRC F P G
Sbjct: 133 HTATVRSVHFCSDGQSFVTASDDKTIKV--WSTHRQKFLFSLSQHINWVRCAKFSPDGRL 190
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 191 IVSASDDKTVKLWDKTSR 208
Score = 54 (24.1 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS G L A+GS D +++I
Sbjct: 85 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 118
Score = 53 (23.7 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ F DGQ T S D +IK+ R
Sbjct: 126 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 165
Score = 37 (18.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 13/74 (17%), Positives = 31/74 (41%)
Query: 73 RMEPSIGLN-PIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
R +P G+ P + + +G + + + P+ + H+ FS +
Sbjct: 3 RSQPRHGIALPGRVLALGKPFPYRAFTHLTMALPQEDPSLERHFKGHRDAVTCVDFSFNM 62
Query: 132 QLCATGSVDASIKI 145
+ A+GS+D+ + +
Sbjct: 63 KQLASGSMDSCLMV 76
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 127 (49.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ S D TVK++D
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
+ + ++ S V LSFHP G+Y++ + L++ +GR+
Sbjct: 218 THRLLQHYQL--HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRL 263
Score = 118 (46.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++ D+
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGF-VTYVDFHPSGTCIAAASMDNT 210
Query: 310 VKLWELSSARCLIAY 324
VK+W++ + R L Y
Sbjct: 211 VKVWDVRTHRLLQHY 225
Score = 110 (43.8 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C F P ++ S S DKTVK++D K+S H + FV + FHP
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGFVTYVDFHP 197
Query: 234 CG 235
G
Sbjct: 198 SG 199
Score = 109 (43.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
G A SVD S+ + LA SM+S + H + VTC+ F PS
Sbjct: 17 GHRDAITSVDFSLNT----KQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 191 APILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247
+LASGS+DKTV+++ + +S+V +AH + VR + F G +V +D +
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAH-----TATVRSVHFCSDGQSLVTASDDKTV 127
Query: 248 RLYSS 252
+++S+
Sbjct: 128 KVWST 132
Score = 101 (40.6 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +K+WD + + + + + H A +++L+F +G YLL++ DS
Sbjct: 195 FHPSGTCIAAASMDNTVKVWDVRTHRLLQHY-QLHSAA-VNALSFHPSGNYLLTASSDST 252
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 253 LKILDLMEGRLL--YTLHGHQG 272
Score = 82 (33.9 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 237 FHPSGNYLLTASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 294
Query: 310 VKLWE 314
V +W+
Sbjct: 295 VMVWK 299
Score = 53 (23.7 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ F DGQ T S D ++K+ R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Score = 50 (22.7 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
P+ Y A HK FS G L A+GS D +++I
Sbjct: 50 PQSRAYRFA---GHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 42 (19.8 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
PE E + H+ + FS++ + A+GS+D+ + +
Sbjct: 6 PEDPSLERHF-KGHRDAITSVDFSLNTKQLASGSMDSCLMV 45
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 161 (61.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 45/154 (29%), Positives = 73/154 (47%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H E V + H I A+ S D+T++++ + S K E T V C+++
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHT-VECIAW 285
Query: 232 HPCGDYMVV----GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
P + G D+ + G SGS+D I+IWD C+ T S HD
Sbjct: 286 APEAAASAINEAAGADN---KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS-GHDNW 341
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
+ L F GKYL+S+ D +++W+L + RC+
Sbjct: 342 -VRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCM 374
Score = 144 (55.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 44/185 (23%), Positives = 89/185 (48%)
Query: 150 RMLAKSSMESSEPQND-QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208
++LA S + S D QQ + I+T++ H V+ + F P+ + S S+D+T+KM++
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 209 SKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267
+ K + +E +VR + H G + D + R++ + SKD ++
Sbjct: 223 ATGYCVKTYTGHRE--WVRMVRVHIEGSIFATCSNDQTI--------RVWLTNSKDCKVE 272
Query: 268 IWDGVSS-KCVATFSKA-----HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
+ D + +C+A +A ++ A + G +L S +D +++W++S CL
Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCL 332
Query: 322 IAYTG 326
+ +G
Sbjct: 333 LTLSG 337
Score = 143 (55.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 222 ESTFVRCLSFHPCGDY--MVVG-TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS-KCV 277
E +R F G+Y + G TD + + G++ S S D IK+WD S +C+
Sbjct: 128 EDATIRIWDFET-GEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECI 186
Query: 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
T HD +SS+ F G Y+LS+ +D +K+WE+++ C+ YTG
Sbjct: 187 KTMH-GHDH-NVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTG 233
Score = 59 (25.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 106 EPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
E +YE + + H + AF G+L A+ S D SIK+ D
Sbjct: 138 ETGEYERS-LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD 178
Score = 38 (18.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 107 PAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
P E +T H++ F L + S DA+I+I D +
Sbjct: 96 PRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFE 138
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 123 (48.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 28/108 (25%), Positives = 55/108 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ D TVK++D
Sbjct: 158 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
+ + ++ S V LSFHP G+Y++ + L++ +GR+
Sbjct: 218 THRLLQHYQL--HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL 263
Score = 122 (48.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++G D+
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNT 210
Query: 310 VKLWELSSARCLIAY 324
VK+W++ + R L Y
Sbjct: 211 VKVWDVRTHRLLQHY 225
Score = 117 (46.2 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D KSS H + FV + FHP
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGFVTYVDFHP 197
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 198 SGTCIAAAGMDNTV 211
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ SDG+ + + S D +K+W K + + S+ + + F+ +G+ ++S+ D
Sbjct: 111 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAK--FSPDGRLIVSASDDKT 168
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ SS C+ +Y G
Sbjct: 169 VKLWDKSSRECVHSYCEHG 187
Score = 102 (41.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
G A VD SI + LA SM+S + H + VTC+ F PS
Sbjct: 17 GHRDAVTCVDFSINT----KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 191 APILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247
+LASGS+DKTV+++ + +S+V +AH + VR + F G V +D +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAH-----TATVRSVHFCSDGQSFVTASDDKTV 127
Query: 248 RLYSS 252
+++++
Sbjct: 128 KVWAT 132
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + + + + H A ++ L+F +G YL+++ DS
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAA-VNGLSFHPSGNYLITASSDST 252
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 253 LKILDLMEGRLL--YTLHGHQG 272
Score = 82 (33.9 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 294
Query: 310 VKLWE 314
V +W+
Sbjct: 295 VMVWK 299
Score = 71 (30.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 20/78 (25%), Positives = 31/78 (39%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F + S DKTVK++ + Q +VRC F P G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRL 159
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 160 IVSASDDKTVKLWDKSSR 177
Score = 54 (24.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS G L A+GS D +++I
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 50 (22.7 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
E+ +H + R+ F DGQ T S D ++K+
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Score = 43 (20.2 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 102 PSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
P A +P+ + H+ FSI+ + A+GS+D+ + +
Sbjct: 4 PCAEDPSLER--HFKGHRDAVTCVDFSINTKQLASGSMDSCLMV 45
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 123 (48.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/108 (25%), Positives = 55/108 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ +S + + D+ + + +H VT ++FHPS +A+ D TVK++D
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
+ + ++ S V LSFHP G+Y++ + L++ +GR+
Sbjct: 180 THRLLQHYQL--HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL 225
Score = 122 (48.0 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D +K+WD S +CV ++ + H G ++ + F +G + ++G D+
Sbjct: 115 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNT 172
Query: 310 VKLWELSSARCLIAY 324
VK+W++ + R L Y
Sbjct: 173 VKVWDVRTHRLLQHY 187
Score = 117 (46.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+L HI V C +F P ++ S S DKTVK++D KSS H + FV + FHP
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGFVTYVDFHP 159
Query: 234 CGDYMVV-GTDHFV 246
G + G D+ V
Sbjct: 160 SGTCIAAAGMDNTV 173
Score = 103 (41.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ SDG+ + + S D +K+W K + + S+ + + F+ +G+ ++S+ D
Sbjct: 73 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAK--FSPDGRLIVSASDDKT 130
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ SS C+ +Y G
Sbjct: 131 VKLWDKSSRECVHSYCEHG 149
Score = 100 (40.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VTC+ F PS +LASGS+DKTV+++ + +S+V +AH + VR + F
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH-----TATVRSVHFCSD 76
Query: 235 GDYMVVGTDHFVLRLYSS 252
G V +D ++++++
Sbjct: 77 GQSFVTASDDKTVKVWAT 94
Score = 94 (38.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + D +K+WD + + + + + H A ++ L+F +G YL+++ DS
Sbjct: 157 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHY-QLHSAA-VNGLSFHPSGNYLITASSDST 214
Query: 310 VKLWELSSARCLIAYTGAGSMG 331
+K+ +L R L YT G G
Sbjct: 215 LKILDLMEGRLL--YTLHGHQG 234
Score = 82 (33.9 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G +++ F+R G+Y S G D
Sbjct: 199 FHPSGNYLITASSDSTLKILDLMEGRLLYTLH-GHQGPA-TTVAFSRTGEYFASGGSDEQ 256
Query: 310 VKLWE 314
V +W+
Sbjct: 257 VMVWK 261
Score = 71 (30.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 20/78 (25%), Positives = 31/78 (39%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + F + S DKTVK++ + Q +VRC F P G
Sbjct: 64 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRL 121
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V +D ++L+ R
Sbjct: 122 IVSASDDKTVKLWDKSSR 139
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS G L A+GS D +++I
Sbjct: 16 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 49
Score = 50 (22.7 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
E+ +H + R+ F DGQ T S D ++K+
Sbjct: 57 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 91
Score = 42 (19.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 215 KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
+A++ V C++F P G + G+ +R++
Sbjct: 15 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 50
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 178 (67.7 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R+LA S +++ D + +TL H V + F P+ +LASGS D T+K+++ +
Sbjct: 54 RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSA 113
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGD----------YMVVGTDHFVLRL-YSSDGRIYC 258
S++ H S V ++F P G + + G +VL + +S DG++
Sbjct: 114 SDSLK--HTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLA 171
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
SGS + IK+WD S+ C + + L F+ +G+ L S D+ +KLW+
Sbjct: 172 SGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD 225
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 61/203 (30%), Positives = 94/203 (46%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H S ++ AFS +GQL A+GS D +IK+ + K +ME + + L++
Sbjct: 82 HSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWN 141
Query: 178 H-IEEVT-CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
I + +E H + + S D + + S K K +T C H G
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQL----LASGSAEKTIKLWDSAT---CGLKHTLG 194
Query: 236 DYMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G ++VL L +S DGR+ SGS D IK+WD S T + H +I SL F
Sbjct: 195 -----GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTL-EGHSN-KIESLAF 247
Query: 295 TRNGKYLLSSGKDSLVKLWELSS 317
+ NG+ L S D+ +KLW+ ++
Sbjct: 248 SPNGQLLASGSSDATIKLWDTAT 270
Score = 142 (55.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 46/192 (23%), Positives = 89/192 (46%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ 221
P+ + P ++TL H + + + F P +LASGS D T+K++D + +++ T++
Sbjct: 24 PKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQ---TLE 80
Query: 222 -ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--DGRIYC-SGSKDG--------DIKIW 269
S+ V+ ++F P G + G+ ++L++S D + G D + ++W
Sbjct: 81 GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Query: 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
+ T D + S+ F+ +G+ L S + +KLW+ SA C + +T G
Sbjct: 141 NPAIGSLKHTIEGHSDW--VLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKHTLGGH 196
Query: 330 MGQQFELTLTVD 341
L + D
Sbjct: 197 SNWVLPLVFSPD 208
Score = 107 (42.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R+LA S +++ D + TL H ++ L F P+ +LASGS D T+K++D +
Sbjct: 210 RLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTA 269
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
S R H S V + F P + G+ ++L+
Sbjct: 270 TGSFR--HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 98 (39.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S +G++ SGS D IK+WD + T K H + S+ F+ + + L S D+
Sbjct: 247 FSPNGQLLASGSSDATIKLWDTATGSFRHTL-KGHSDM-VLSVVFSPDSQLLESGSGDNT 304
Query: 310 VKLWE 314
+KLW+
Sbjct: 305 IKLWD 309
Score = 64 (27.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+ H + AFS DGQL A+GS + +IK+ D
Sbjct: 151 IEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 146 (56.5 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YSSDG+ +G+ DG IK+WD S C+ TF++ H A +S L F++ G L SS D
Sbjct: 347 YSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQ-HTSA-VSGLCFSKRGNVLFSSSLDGS 404
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
V+ W+L R +T + QF + VD
Sbjct: 405 VRAWDLIRYRNFRTFTAPSRV--QFSC-IAVD 433
Score = 112 (44.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 41/152 (26%), Positives = 75/152 (49%)
Query: 166 QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD-YSKSSVRKAHKTIQEST 224
Q G ++ TL H V+ L F+ S +LASGS DKTV+++D +S+S + + + +
Sbjct: 455 QTGQ-LLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEP---LPIPS 510
Query: 225 FVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA 283
V L+FHP G + V + L ++ +G+ + DG + G T +
Sbjct: 511 DVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQ--TSLIDGRKDLSGGRRFDDARTAENS 568
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
+S+ ++ +G +LS+G V L+++
Sbjct: 569 SLNKTFTSICYSADGSCVLSAGTSKYVCLYDI 600
Score = 102 (41.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 254 GRIYCSGSKDG-DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
G I C+GS+D +I +W + + + T + H+G +SSL+F +G L S D V++
Sbjct: 436 GEIVCAGSQDSFEIFMWSVQTGQLLETLA-GHEGP-VSSLSFNSSGSLLASGSWDKTVRI 493
Query: 313 WELSS 317
W++ S
Sbjct: 494 WDIFS 498
Score = 97 (39.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
L + S+ I SK G + +W+ S V +D +S+L ++ +G+ +++
Sbjct: 302 LTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDA--LSTLQYSSDGQRIITGAD 359
Query: 307 DSLVKLWELSSARCLIAYT 325
D +K+W+++S C++ +T
Sbjct: 360 DGKIKVWDMNSGFCIVTFT 378
Score = 83 (34.3 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 29/142 (20%), Positives = 63/142 (44%)
Query: 106 EPAQ-YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRML-AKSSMESSEPQ 163
+P + + +T HK+ +G FS D Q T S D ++ + + A ++ +
Sbjct: 176 DPIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYSPLFQAGEVIDEEAEE 235
Query: 164 NDQQGHPVI---RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
N + H + R ++ ++ C FHP++ +L G +++ S +I
Sbjct: 236 NKTRTHIWLIKERHYFNQNSKLRCAAFHPTSNLLVVGFSSGLFGIYELP-SFTMLYQLSI 294
Query: 221 QESTFVRCLSFHPCGDYMVVGT 242
+S + L+ + GD++ +G+
Sbjct: 295 TQSN-IDTLTVNSTGDWIAIGS 315
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 213 VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
+++ H Q S +RC +FHP + +VVG + +Y
Sbjct: 245 IKERHYFNQNSK-LRCAAFHPTSNLLVVGFSSGLFGIY 281
Score = 53 (23.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
SH +S DGQ TG+ D IK+ D++
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMN 369
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVI--RTLY 176
KSP A FS +G+ A S+ K++ V R +S+E +++ P + R
Sbjct: 96 KSPVGAIEFSPNGKFFAV-SLG---KLIQVWR--TPNSLE------EREFAPFVLHREYT 143
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKM 205
H +++ + + + S SKD T ++
Sbjct: 144 GHFDDIVSISWSADSRFFISTSKDLTARL 172
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 123 (48.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S+DG + + S DG +IWD +S +C+ T + + +S+L FT N KYLL S +S +
Sbjct: 189 SADGTLCATASYDGMARIWDVLSGQCLKTLVEPIN-VPLSNLQFTENRKYLLVSNLNSQI 247
Query: 311 KLWE 314
+LW+
Sbjct: 248 RLWD 251
Score = 98 (39.6 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS-SVR--KAHKTIQESTFVRCLS 230
TL+ H ++ +++ + LAS S DKT++++D+ K SVR K H + +V +
Sbjct: 91 TLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGH-----TNYVSSID 145
Query: 231 FHPCGDYMVVGTDHFVLRLYS-SDG 254
F+P G +V G+ +R+++ DG
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDG 170
Score = 98 (39.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+++ + S S D I+IWD +C K H +SS+ F G L+S D
Sbjct: 104 WATGSKYLASASDDKTIRIWD-FEKRCSVRCLKGHTNY-VSSIDFNPLGTLLVSGSWDET 161
Query: 310 VKLWELSSARCL 321
V++W L CL
Sbjct: 162 VRIWNLQDGTCL 173
Score = 71 (30.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200
+ +K + LA +S + + D + +R L H V+ ++F+P +L SGS D
Sbjct: 100 SQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWD 159
Query: 201 KTVKMFD 207
+TV++++
Sbjct: 160 ETVRIWN 166
Score = 66 (28.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
TL+ H + VTC+ P+ +A+ S D T+K++
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIW 81
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 142 (55.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
DG + S + DG ++IWD + +C+ T D +SS+ F+ NGKY+L+ D V+L
Sbjct: 314 DGTLIASCATDGLVRIWDTSTGQCLRTLVH-EDNPPVSSVKFSPNGKYVLAWTLDDCVRL 372
Query: 313 WELSSARCLIAYTG 326
W+ RCL Y G
Sbjct: 373 WDYVEGRCLKTYQG 386
Score = 120 (47.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 172 IRTL-YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
+RTL ++ V+ ++F P+ + + + D V+++DY + K ++ + +
Sbjct: 338 LRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGA 397
Query: 231 FHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290
F G + T + + SGS+DG I WD V+ K + +AHDG +
Sbjct: 398 FGVYGQSIPGRTPGYAFAV---------SGSEDGAILCWDVVTKKVLQRI-EAHDGVVLG 447
Query: 291 SLTF-TRNGKYLLSSGKDSLVKLWE 314
T T G++++S G D V++WE
Sbjct: 448 VDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 101 (40.6 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 240 VGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298
+G ++V + +S G + SGS D + +WD S++ + + AH +S + +G
Sbjct: 258 IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLP-AHSDP-VSGIDVVWDG 315
Query: 299 KYLLSSGKDSLVKLWELSSARCL 321
+ S D LV++W+ S+ +CL
Sbjct: 316 TLIASCATDGLVRIWDTSTGQCL 338
Score = 77 (32.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHP 233
L H+ V+ + F P A ++ASG D VK++ +S K T + + +S+ P
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVW---AASTGKLIYTFEGHLAGISTISWSP 228
Query: 234 CGDYMVVGTDHFVLRLYS 251
G + G+D +RL++
Sbjct: 229 DGATIASGSDDKTIRLWN 246
Score = 59 (25.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 102 PSAPEPAQYETAYVT-SHKSPCRAGAFSIDGQLCATGSVDASIKI 145
P PE Y ++ H A FS D + A+G D ++K+
Sbjct: 158 PPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKV 202
Score = 52 (23.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV-DRMLAKSSMESSEP 162
+ T ++ H + A AFS G + +GS D ++ + DV + KS S+P
Sbjct: 253 HPTPFI-GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDP 305
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 126 AFSIDGQLCATGSVDASIKILDV 148
++S DG A+GS D +I++ +V
Sbjct: 225 SWSPDGATIASGSDDKTIRLWNV 247
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 125 (49.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G ++++ F+ NG YL + +DS
Sbjct: 359 FHPDGLIFGTGTGDSQIKIWDLKERTNVANFP-GHSGP-VTAIAFSENGYYLATGAQDSS 416
Query: 310 VKLWEL 315
+KLW+L
Sbjct: 417 LKLWDL 422
Score = 95 (38.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D++ ++ TL H ++V+ + +HP+ ++ S S D T++++ + + + + ES
Sbjct: 251 DRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRA-HESA 309
Query: 225 FVRCLSFHPCGDYMVVGTD 243
V LS H GDY++ ++
Sbjct: 310 -VTGLSLHATGDYLLSSSE 327
Score = 85 (35.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S +G +G++D +K+WD K T + + E+ SL F ++G YL G D
Sbjct: 401 FSENGYYLATGAQDSSLKLWDLRKLKNFKTIT-LDNNYEVKSLVFDQSGTYLAVGGSDIR 459
Query: 310 V---KLW 313
V K W
Sbjct: 460 VYICKQW 466
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 144 (55.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 49/173 (28%), Positives = 71/173 (41%)
Query: 160 SEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPS--APILASGSKDKTVKMFDYSKSSVRKA 216
+ P+ND V + H VT L + AP LAS S D T+K++ S+ K
Sbjct: 392 TSPENDSCSTLVPVAAATGHANTVTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKE 451
Query: 217 HKTIQESTFVRCLSFHPCGDYMVV-GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275
K E FV L C MV G D + + SD I +G D +K+W + K
Sbjct: 452 VKIDAEKDFVEQLPKLTCSSTMVAHGKDVNCVDISESDALI-ATGGMDKLVKLWQVDTHK 510
Query: 276 CVATFSKAHDGAE--ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ G + + F +N L S D +K+W +S CL +G
Sbjct: 511 MQLGIAGTLSGHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISG 563
Score = 97 (39.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
CSG D IKIW+ C+ T S H A + + F RN L+S+ ++K+W + +
Sbjct: 541 CSG--DMTIKIWNISEKSCLQTIS-GHSCA-VFRVIFARNDSQLISADSAGIIKIWTIKT 596
Query: 318 ARC 320
A C
Sbjct: 597 ADC 599
Score = 79 (32.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 95 EFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
E+ +DPS +P T + T H +P F+ +G L ATGS D +K+
Sbjct: 86 EYSIPLDPSTTKPELART-WKTIHTAPILVMEFNEEGHLLATGSADHIVKV 135
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 164 NDQQGHP--VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
N +G P ++ T H +T L P + ++ + S+D+T+ + +
Sbjct: 177 NIMRGAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQTMSIHE 222
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 125 (49.1 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG + S S DG I+IWD + +C+ T D ++++ F+ NG+Y+L+ DS
Sbjct: 356 FCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVH-EDNPAVTNVCFSPNGRYILAFNLDSC 414
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFEL 336
++LW+ + + T G + F +
Sbjct: 415 IRLWDYIAHPSKVKKTYQGHVNTGFSI 441
Score = 111 (44.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 239 VVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297
++G ++V L +S G I SGS D + +WD + + + + AH +S + F R+
Sbjct: 302 LLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLP-AHSDP-VSGIDFCRD 359
Query: 298 GKYLLSSGKDSLVKLWELSSARCL 321
G ++S D L+++W+ ++ +CL
Sbjct: 360 GTLVVSCSTDGLIRIWDTATGQCL 383
Score = 93 (37.8 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200
A ++I R +A +S + + D + I TL H+ V+CL + P + LA+GS D
Sbjct: 184 AQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSGTLATGSDD 243
Query: 201 KTVKMFDYSKSSVRKAH 217
K ++++D + + AH
Sbjct: 244 KAIRLWD--RITAEPAH 258
Score = 80 (33.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 25/110 (22%), Positives = 47/110 (42%)
Query: 158 ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH 217
ES P+ Q + L H + + + P+ +AS S D T +++D +
Sbjct: 159 ESKPPERVQVRYKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGA--HID 216
Query: 218 KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS--SDGRIYCSGSKDGD 265
+ V CL++ P + G+D +RL+ + + G++DGD
Sbjct: 217 TLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGD 266
Score = 74 (31.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
R L H V CL F P ILASGS D+ V ++D
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWD 334
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE--LS 316
S S+DG I +WD V SK V AHDG G ++S+GKD+ + ++ L+
Sbjct: 491 SASEDGHIVLWD-VKSKEVVQKIAAHDGV---CFWVDVVGDTMVSAGKDARILVYRNTLN 546
Query: 317 SAR 319
S R
Sbjct: 547 SRR 549
Score = 51 (23.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 107 PAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-MLAKSSMESSEP 162
PA+ + H + AFS G + A+GS D ++ + DV L +S S+P
Sbjct: 294 PARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDP 350
Score = 45 (20.9 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYET-AYVTS---HKSPCRAGAF 127
+R+E PI ++ I P + D +A ET A++ + H + A+
Sbjct: 172 RRLELRGHSQPIAQVRISPNGRWIASASADGTA-RIWDAETGAHIDTLVGHMAGVSCLAW 230
Query: 128 SIDGQLCATGSVDASIKILD 147
S D ATGS D +I++ D
Sbjct: 231 SPDSGTLATGSDDKAIRLWD 250
Score = 41 (19.5 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 225 FVRCLSFHPCGDYMVVGT 242
+V CL+F P G+ + G+
Sbjct: 308 YVYCLAFSPKGNILASGS 325
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 136 (52.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G + SGS D ++KIWD C+ T+ K H ++ L FT +G++++S G+D++VK+W
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRG-VNVLRFTPDGRWIVSGGEDNVVKVW 170
Query: 314 ELSSARCL 321
+L++ + L
Sbjct: 171 DLTAGKLL 178
Score = 123 (48.4 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
VLR ++ DGR SG +D +K+WD + K + F K+H+G +I SL F + ++LL++G
Sbjct: 148 VLR-FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF-KSHEG-KIQSLDFHPH-EFLLATG 203
Query: 306 K-DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
D VK W+L + LI G + G + LT D
Sbjct: 204 SADKTVKFWDLETFE-LIGSGGTETTGVRC-LTFNPD 238
Score = 118 (46.6 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 35/97 (36%), Positives = 54/97 (55%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H ++ L+FHP +LA+GS DKTVK +D + + T E+T VRCL+F+P G
Sbjct: 184 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGT--ETTGVRCLTFNPDGKS 241
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKDG-DIKIWDGVS 273
++ G L+++S + I C DG D+ W +S
Sbjct: 242 VLCGLQES-LKIFSWEP-IRCH---DGVDVG-WSNLS 272
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D + V+RTL H + FHP ASGS D +K++D K +K +
Sbjct: 87 DLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG--HTR 144
Query: 225 FVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRIYCS-GSKDGDIKIWD 270
V L F P G ++V G + V++++ + G++ S +G I+ D
Sbjct: 145 GVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Score = 87 (35.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 168 GHP-VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
G P I +LY H + + F S ++A+G+ T+K++D ++ V + T S V
Sbjct: 47 GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRT-LTGHRSNCV 105
Query: 227 RCLSFHPCGDYMVVGT 242
++FHP G++ G+
Sbjct: 106 S-VNFHPFGEFFASGS 120
Score = 67 (28.6 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
+ +GS D +K WD + + + + G + LTF +GK +L ++SL K++
Sbjct: 199 LLATGSADKTVKFWDLETFELIGSGGTETTG--VRCLTFNPDGKSVLCGLQESL-KIFSW 255
Query: 316 SSARC 320
RC
Sbjct: 256 EPIRC 260
Score = 66 (28.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
+T H+S C + F G+ A+GS+D ++KI D+
Sbjct: 97 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
H S + F L A G+ +IK+ D++
Sbjct: 58 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLE 89
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 127 (49.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE--ISSLTFTRNGKYLLSSGKD 307
YSSDGR SGS D KIWD KC T G + ++S+ + +G+ + + D
Sbjct: 377 YSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD 436
Query: 308 SLVKLWELSSARCLIAYTG 326
++V+LW+ + L Y G
Sbjct: 437 NIVRLWDAQTGYFLERYEG 455
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 26/89 (29%), Positives = 50/89 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG +G++D +K+WD + K TF H+ +I SL ++ +G++++S D
Sbjct: 335 FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFY-GHE-LDIYSLDYSSDGRFIVSGSGDKK 392
Query: 310 VKLWELSSARCLIAYT-GAGSMGQQFELT 337
K+W++ +C A+T G +G + +T
Sbjct: 393 AKIWDIEKGKC--AFTLGNEEVGPKNGVT 419
Score = 111 (44.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWD--GVSSK--CVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
+S DG+ SGS D +K+WD G S+ C ATF+ D + S+ F+ +G +L+S
Sbjct: 465 FSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF--VLSVAFSPDGSWLISGS 522
Query: 306 KDSLVKLWE 314
KD V+ W+
Sbjct: 523 KDRSVQFWD 531
Score = 109 (43.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S DGR+ +GS D +++WD + + + D + S+ F+ +GK L S D +
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS--VYSVAFSPDGKSLASGSLDKSL 481
Query: 311 KLWELSSAR 319
KLW+LS +R
Sbjct: 482 KLWDLSGSR 490
Score = 92 (37.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
+PS + + H S FS DG+ ATG + S +I DVD + +
Sbjct: 263 NPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVD---TGKKVHAF 318
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
++++ G IR++ C F P LA+G++DKTVK++D ++ H
Sbjct: 319 VDESEKDGDLYIRSV--------C--FSPDGNYLATGAEDKTVKVWDIHTKKIQ--HTFY 366
Query: 221 QESTFVRCLSFHPCGDYMVVGT 242
+ L + G ++V G+
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGS 388
Score = 84 (34.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV 182
R+ FS DG ATG+ D ++K+ D+ + + Q+ T Y H ++
Sbjct: 331 RSVCFSPDGNYLATGAEDKTVKVWDI---------HTKKIQH---------TFYGHELDI 372
Query: 183 TCLEFHPSAPILASGSKDKTVKMFDYSKS--SVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
L++ + SGS DK K++D K + ++ + V ++ P G +
Sbjct: 373 YSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAA 432
Query: 241 GTDHFVLRLYSS 252
G+ ++RL+ +
Sbjct: 433 GSLDNIVRLWDA 444
Score = 75 (31.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST-----FVRCLSFH 232
H V C+ F LA+G +++ +++D +K H + ES ++R + F
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTG--KKVHAFVDESEKDGDLYIRSVCFS 336
Query: 233 PCGDYMVVGTDHFVLRLY 250
P G+Y+ G + ++++
Sbjct: 337 PDGNYLATGAEDKTVKVW 354
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 124 (48.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 240 VGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298
+G VL L S DGR SG +DG I +WD +++C+ H+ + SL+++ G
Sbjct: 541 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM-GHNSC-VWSLSYSGEG 598
Query: 299 KYLLSSGKDSLVKLWELSSA 318
L S D VKLW+++S+
Sbjct: 599 SLLASGSADCTVKLWDVTSS 618
Score = 121 (47.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
+GS D +++WD + +CV F H + SL + +G+Y+ S +D + +W+LS+A
Sbjct: 519 TGSSDKTVRLWDVQTGECVRIFI-GHRSM-VLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 319 RCLIAYTGAGS 329
RC+ G S
Sbjct: 577 RCITPLMGHNS 587
Score = 100 (40.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 48/209 (22%), Positives = 81/209 (38%)
Query: 73 RMEPSIGLNPIQEILIGPGL--DLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID 130
R++P + L P+ + + DL + A + T +V +H + S D
Sbjct: 307 RVKPELAL-PVMSTDVEQSILEDLRNRVQLSSVAMPSVSFYT-FVNTHNG-LNCSSISHD 363
Query: 131 GQLCATGSVDASIKILDVDRM--LAKSSMESSEPQNDQQGHPVIRTLYD----HIEEVTC 184
G L A G D+SIK+ D+ ++ ++++ +DQ P R Y H V
Sbjct: 364 GSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYS 423
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244
F P + S S D T++++ ++ +K + V F P G Y +
Sbjct: 424 ATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKG--HNYPVWDAQFSPFGHYFASCSHD 481
Query: 245 FVLRLYSSDG----RIYCSGSKDGDIKIW 269
R++S D RI D D W
Sbjct: 482 RTARIWSMDRIQPLRIMAGHLSDVDCVQW 510
Score = 38 (18.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 135 ATGSVDASIKILDV 148
ATGS D ++++ DV
Sbjct: 518 ATGSSDKTVRLWDV 531
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD S +CV FS + A + F+
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF--VDFS 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
NG + S+G D V++W++ R L Y
Sbjct: 196 PNGTCIASAGSDHAVRIWDIRMNRLLQHY 224
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 189 PSAPILA---SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDH 244
P PIL G K + D+S + + A T TF+ S P Y VG
Sbjct: 5 PEDPILERYFKGHK-AAITSADFSPNCKQIA--TASWDTFLMLWSLKPHARAYRYVGHKD 61
Query: 245 FVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
V L +S G + S S+D +++W + K ++ KAH A + S+ F+ +G++L++
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWV-LDRKGKSSEFKAHT-APVRSVDFSADGQFLVT 119
Query: 304 SGKDSLVKLWELSSARCL 321
+ +D +K+W + R L
Sbjct: 120 ASEDKSIKVWSMYRQRFL 137
Score = 99 (39.9 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY-SKSSVRKAHKTIQESTFVRCLSFH 232
+LY H V C +F P ++ S S+DKT+K++D SK V ++ + FV F
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFV---DFS 195
Query: 233 PCGDYMV-VGTDHFV 246
P G + G+DH V
Sbjct: 196 PNGTCIASAGSDHAV 210
Score = 96 (38.9 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMF--DYS-KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VT L+F P +LAS S+DKTV+++ D KSS KAH + VR + F
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAH-----TAPVRSVDFSAD 113
Query: 235 GDYMVVGTDHFVLRLYS 251
G ++V ++ ++++S
Sbjct: 114 GQFLVTASEDKSIKVWS 130
Score = 93 (37.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/119 (21%), Positives = 52/119 (43%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F P+ +AS D V+++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V CLSFHP G+ +V + +++ +GR IY G +
Sbjct: 217 MNRLLQHYQV--HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPV 273
Score = 92 (37.4 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV +S +G S D ++IWD ++ + + + H ++ L+F +G
Sbjct: 186 VGFANFVD--FSPNGTCIASAGSDHAVRIWDIRMNRLLQHY-QVHS-CGVNCLSFHPSGN 241
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV 344
L+++ D VK+ +L R + YT G G F ++ + D ++
Sbjct: 242 SLVTASSDGTVKILDLVEGRLI--YTLQGHTGPVFTVSFSKDGEL 284
Score = 87 (35.7 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D V + + T + H G + +++F+++G+ S G D+
Sbjct: 236 FHPSGNSLVTASSDGTVKILDLVEGRLIYTL-QGHTGP-VFTVSFSKDGELFTSGGADAQ 293
Query: 310 VKLWELS 316
V +W S
Sbjct: 294 VLVWRTS 300
Score = 70 (29.7 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQ T S D SIK+ + R
Sbjct: 100 AHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Score = 52 (23.4 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
YV HK + FS G L A+ S D ++++ +DR KSS
Sbjct: 56 YV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRK-GKSS 96
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 103 SAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
S PE E Y HK+ + FS + + AT S D + +
Sbjct: 3 SGPEDPILER-YFKGHKAAITSADFSPNCKQIATASWDTFLML 44
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 137 (53.3 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 25/71 (35%), Positives = 46/71 (64%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G + SGS D ++KIWD C+ T+ K H ++ L FT +G++++S G+D++VK+W
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRG-VNVLRFTPDGRWVVSGGEDNIVKVW 170
Query: 314 ELSSARCLIAY 324
+L++ + L +
Sbjct: 171 DLTAGKLLTEF 181
Score = 123 (48.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
VLR ++ DGR SG +D +K+WD + K + F K+H+G +I SL F + ++LL++G
Sbjct: 148 VLR-FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF-KSHEG-QIQSLDFHPH-EFLLATG 203
Query: 306 K-DSLVKLWELSSARCLIAYTGAGSMG 331
D VK W+L + LI G + G
Sbjct: 204 SADRTVKFWDLETFE-LIGSGGPETAG 229
Score = 107 (42.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H ++ L+FHP +LA+GS D+TVK +D + + E+ VRCLSF+P G
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGP--ETAGVRCLSFNPDGKT 241
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKD 263
++ G L+++S + I C D
Sbjct: 242 VLCGLQES-LKIFSWEP-IRCHDGVD 265
Score = 84 (34.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 168 GHP-VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
G P I +LY H + + F S ++A+G+ T+K++D ++ + + T S +
Sbjct: 47 GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRT-LTGHRSNCI 105
Query: 227 RCLSFHPCGDYMVVGT 242
+ FHP G++ G+
Sbjct: 106 S-VDFHPFGEFFASGS 120
Score = 66 (28.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
+T H+S C + F G+ A+GS+D ++KI D+
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
H S + F L A G+ +IK+ D++
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLE 89
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 128 (50.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
NG + S+G D VK+W++ + L Y
Sbjct: 196 PNGTCIASAGSDHAVKIWDIRMNKLLQHY 224
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+P+ +AS D VK++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYSSDGR-IYCSGSKDGDI 266
+ + + ++ S V CLSFHP G+ +V + D V L +GR IY G +
Sbjct: 217 MNKLLQHYQV--HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPV 273
Score = 98 (39.6 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLSFH 232
+LY H V C +F P ++ S S+DKT+K++D + K V ++ + FV F+
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFN 195
Query: 233 PCGDYMV-VGTDHFV 246
P G + G+DH V
Sbjct: 196 PNGTCIASAGSDHAV 210
Score = 91 (37.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV ++ +G S D +KIWD +K + + + H ++ L+F G
Sbjct: 186 VGFANFVD--FNPNGTCIASAGSDHAVKIWDIRMNKLLQHY-QVHS-CGVNCLSFHPLGN 241
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV 344
L+++ D VK+ +L R + YT G G F ++ + D ++
Sbjct: 242 SLVTASSDGTVKMLDLIEGRLI--YTLQGHTGPVFTVSFSKDGEL 284
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMF--DYS-KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VT L+F P +LAS S+D+TV+++ D KSS KAH + VR + F
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAH-----TAPVRSVDFSAD 113
Query: 235 GDYMVVGTDHFVLRLYS 251
G +V ++ ++++S
Sbjct: 114 GQLLVTASEDKSIKVWS 130
Score = 84 (34.6 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G + S DG +K+ D + + + T + H G + +++F+++G+ L S G D+ V +W
Sbjct: 240 GNSLVTASSDGTVKMLDLIEGRLIYTL-QGHTGP-VFTVSFSKDGELLTSGGADAQVLIW 297
Score = 74 (31.1 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQL T S D SIK+ + R
Sbjct: 100 AHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Score = 52 (23.4 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
YV HK + FS G L A+ S D ++++ +DR KSS
Sbjct: 56 YV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRK-GKSS 96
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 250 YSSDGRIYCSGSKDGDIKIW 269
+S DG + SG D + IW
Sbjct: 278 FSKDGELLTSGGADAQVLIW 297
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 168 (64.2 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE-PQNDQQGHPVIR 173
+ H A FS G+ T S D ++KI ++ + + ++ + ND +
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSK 134
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF--DYSKSSVRKAHKTIQESTFVRCLSF 231
++ ++ T + +A K T +F +++ S + ES + +
Sbjct: 135 SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C + +D ++ DG + SGS DG ++IWD + +CV T + ++
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD-DENPPVAF 253
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ F+ NGKY+LSS D+ +KLW+ + L Y G
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQG 288
Score = 90 (36.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 67 EPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYE-TAYVTSHKSPCRAG 125
EP +E + G+N + P L S +P P A E TA TS +S
Sbjct: 11 EPPAAPAVEEAQGVNNSEAEAPAPAA-LSSVSPANP--PITAVPEATAPTTSQESTIPGA 67
Query: 126 AFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184
+ + + T S+ A +K + L SS + + + RTL H V
Sbjct: 68 GYKLISTIEGHTKSISA-VKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVND 126
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST-FVRCLSFHPCGDYMVVGTD 243
+ + + + S DKT+K+ Y +V+ A KT++ T +V C +F+P +V G+
Sbjct: 127 FAWSADSKSIVTASDDKTLKI--YEVPTVKMA-KTLKGHTNYVFCCNFNPQSSLVVSGSF 183
Query: 244 HFVLRLY 250
+R++
Sbjct: 184 DESVRIW 190
Score = 76 (31.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 17/80 (21%), Positives = 40/80 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE---ISSLTFTRNGKYLLSSGK 306
+S +G+ S + D +K+WD K + + + H+ + ++ + T GK+++S +
Sbjct: 256 FSPNGKYILSSNLDNTLKLWDFGKGKTLKQY-QGHENNKYCIFANFSVT-GGKWIISGSE 313
Query: 307 DSLVKLWELSSARCLIAYTG 326
D + +W L + + + G
Sbjct: 314 DCKIYVWNLQTKEVVQSLEG 333
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 166 (63.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKIL-----DVDRMLAKS 155
+P P A T + H + + FS +G+ A+ + DA I I + + L
Sbjct: 23 EPQKPNYALRLT--LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGH 80
Query: 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK 215
S+E S+ ++ D +V + L G D V D++ S
Sbjct: 81 SLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTL-KGHSD-FVFCCDFNPPSNLI 138
Query: 216 AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275
+ ES + + C + +D ++ +G + SGS DG +IWD S +
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ 198
Query: 276 CVATFSKAHDG-AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
C+ T A +G +S + F+ NGKY+L++ D+ +KLW+ S RCL YTG
Sbjct: 199 CLRTL--ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
Score = 127 (49.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ + SGS D +KIW+ + KC+ T S AH IS++ F NG ++S D L
Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLS-AHSDP-ISAVNFNCNGSLIVSGSYDGL 188
Query: 310 VKLWELSSARCLIAYTGAGS 329
++W+ +S +CL G+
Sbjct: 189 CRIWDAASGQCLRTLADEGN 208
Score = 48 (22.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 152 LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTV 203
L + EPQ + + + TL H ++ ++F P+ LAS + D +
Sbjct: 14 LLSAPRREEEPQ--KPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALI 63
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 166 (63.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 57/231 (24%), Positives = 101/231 (43%)
Query: 103 SAPEPAQYETAY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV-DRMLAKSSMESS 160
S P+ Y Y + H + FS DG+ A+ S D +IKI D ++
Sbjct: 29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHK 88
Query: 161 EPQND----QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
E +D Q + D ++ +E L G K+ + ++ S
Sbjct: 89 EGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTL-KGHKEYVFGV-SFNPQSNLIV 146
Query: 217 HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276
+ E+ + ++ C + +D ++ DG + SGS DG ++IWD + +
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 277 VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS-ARCLIAYTG 326
+ T S DG E+S + F+ NGK++L+ D+ ++LW ++ +CL YTG
Sbjct: 207 LNTIS-TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 155 (59.6 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 131 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 189
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 190 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 247
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 248 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 319 RCL 321
RC+
Sbjct: 306 RCM 308
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 83 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 141
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 142 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 199
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 200 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 258
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 259 DVSTGMCLMTLVG 271
Score = 114 (45.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 207 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 265
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 266 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 317
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 318 -VTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 50 (22.7 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
DP P E ++ H+SP F + + S DA+IK+ D +
Sbjct: 25 DPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 73
Score = 47 (21.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 44 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 102
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 103 CSADMTIKLWD 113
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSTISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDISTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DISTGMCLMTLVG 336
Score = 113 (44.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 46 (21.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHTGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 148 VDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
+D K++M+ E + + R + + V C +F P L +GS D ++++
Sbjct: 184 IDLFRGKAAMKDQE--EEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEVW 241
Query: 207 DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL-YSSDGRIYCSGSKDGD 265
+++ VRK L + +M++ + VL L +S D + SG++DG
Sbjct: 242 NFTTGKVRKD------------LKYQAQDQFMMM--EQAVLALNFSRDSEMVASGAQDGQ 287
Query: 266 IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325
IK+W ++ +C+ F KAH I+ L F+R+ +LS+ D V+L L S + L +
Sbjct: 288 IKVWRIITGQCLRKFEKAHTKG-ITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFK 346
Query: 326 GAGSMGQQFELTLTVD 341
G S E T T D
Sbjct: 347 GHSSFVN--EATFTPD 360
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 127 (49.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG+ +G++D I++WD ++++ + H+ +I SL F NG+Y+ S D
Sbjct: 324 FSPDGKYLATGAEDKQIRVWD-IATRTIKHIFSGHE-QDIYSLDFAGNGRYIASGSGDKT 381
Query: 310 VKLWELSSARCLIAYT 325
V+LW+++ + + YT
Sbjct: 382 VRLWDIAEGK--LVYT 395
Score = 114 (45.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS--SLTFTRNGKYLLSSGKDS 308
S DG +GS D +++WD + V DG + S S+ F NGK L+S D
Sbjct: 408 SPDGLYVAAGSLDKTVRVWDTTTGYLVERLENP-DGHKDSVYSVAFAPNGKELVSGSLDK 466
Query: 309 LVKLWELSSARCLIAYTGAGSMGQ 332
+KLWEL+ R Y AG G+
Sbjct: 467 TIKLWELNLPRQ--QYNSAGKGGK 488
Score = 102 (41.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 40/166 (24%), Positives = 74/166 (44%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
+P E + H S FS DG+ ATG + S +I DV L ++
Sbjct: 251 NPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYLATGC-NRSAQIFDVT--LGQNVAVLQ 307
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
+ D+ G IR++ C F P LA+G++DK ++++D + +++
Sbjct: 308 DESVDKSGDLYIRSV--------C--FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGH 357
Query: 221 QESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGR-IYCSGSKDG 264
++ + L F G Y+ G+ +RL+ ++G+ +Y +DG
Sbjct: 358 EQDIY--SLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG 401
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 155 (59.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 135 (52.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/193 (22%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 46 (21.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVEDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 124 (48.7 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++S G S D IKIWD ++K + + K H+ A ++ +F +G YL+S DS
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTNKLIQHY-KVHN-AGVNCFSFHPSGNYLISGSSDST 251
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV 344
+K+ +L R + YT G G +T + D D+
Sbjct: 252 IKILDLLEGRLI--YTLHGHKGPVLTVTFSRDGDL 284
Score = 122 (48.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++A + + D H I D+ T ++F+ S +AS D T+K++D
Sbjct: 157 RLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + +K + V C SFHP G+Y++ G+ +++ +GR IY G +
Sbjct: 217 TNKLIQHYKV--HNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPV 273
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S D +++WD S +C+ F+ G + + F +G + SSG D+
Sbjct: 152 FSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY--GGSATFVDFNSSGTCIASSGADNT 209
Query: 310 VKLWELSSARCLIAY 324
+K+W++ + + + Y
Sbjct: 210 IKIWDIRTNKLIQHY 224
Score = 104 (41.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG+ + S D +K+W GV K H + F+ +G+ + S G D
Sbjct: 110 FSRDGQRLVTASDDKSVKVW-GVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRT 167
Query: 310 VKLWELSSARCLIAYTGAG 328
V+LW+ SS +C+ +T G
Sbjct: 168 VRLWDTSSHQCINIFTDYG 186
Score = 94 (38.1 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G SGS D IKI D + + + T H G + ++TF+R+G S G DS
Sbjct: 236 FHPSGNYLISGSSDSTIKILDLLEGRLIYTLH-GHKGP-VLTVTFSRDGDLFASGGADSQ 293
Query: 310 VKLWE 314
V +W+
Sbjct: 294 VLMWK 298
Score = 83 (34.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + +T + F PS ++AS S+D+TV+++ S +S+V KAH + VR + F
Sbjct: 59 HTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAH-----TASVRSVHFSRD 113
Query: 235 GDYMVVGTD 243
G +V +D
Sbjct: 114 GQRLVTASD 122
Score = 76 (31.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 16/74 (21%), Positives = 42/74 (56%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H + ++C +F+P+ LA+GS DK++ +++ + + +A + + + + ++F P G
Sbjct: 17 HKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKA--RAFRFVGHTDVITGVNFAPSGSL 74
Query: 238 MVVGTDHFVLRLYS 251
+ + +RL++
Sbjct: 75 VASSSRDQTVRLWT 88
Score = 66 (28.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ FS DGQ T S D S+K+ V+R
Sbjct: 94 ESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVER 133
Score = 66 (28.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 128 SIDGQLCATGSVDASIKILDVDR---MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184
SI G+ + AS++ + R L +S + S + + +L H V C
Sbjct: 90 SIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRC 149
Query: 185 LEFHPSAPILASGSKDKTVKMFDYS 209
F P ++AS D+TV+++D S
Sbjct: 150 ARFSPDGRLIASCGDDRTVRLWDTS 174
Score = 65 (27.9 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 159 SSEPQNDQQGHPVIR---TLYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR 214
SS Q + P I+ T++ H V + F L + S DK+VK++ +
Sbjct: 78 SSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKF- 136
Query: 215 KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252
+ + + +VRC F P G + D +RL+ +
Sbjct: 137 -LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILD 147
H + R FS DG+L A+ D ++++ D
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Score = 42 (19.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
HK F+ + + ATGS D S+ I
Sbjct: 17 HKDVISCADFNPNNKQLATGSCDKSLMI 44
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 130 (50.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D +KIWD VA F H G IS+++F+ NG YL ++ D+
Sbjct: 358 FHPDGLIFGTGTVDSQVKIWDLKEQSNVANFP-GHTGP-ISAISFSENGYYLATAADDAC 415
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 416 VKLWDL 421
Score = 85 (35.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS- 308
+S +G + + D +K+WD K T + DG E+ L F ++G YL +G D
Sbjct: 400 FSENGYYLATAADDACVKLWDLRKLKNFKTI-QLDDGYEVKDLCFDQSGTYLAIAGSDVR 458
Query: 309 --LVKLWE 314
L K W+
Sbjct: 459 VYLCKQWQ 466
Score = 80 (33.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 137 GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196
G + I D ++L + +++ N + ++ L H +++T + +HP+ + +
Sbjct: 224 GILALDINSADHSKILTGGNDKNATVFN-KDTEQMVAILKGHTKKITKVIYHPNEDTVIT 282
Query: 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV 239
GS D ++++ S + + E V LS HP GDY++
Sbjct: 283 GSPDMNIRIWHVPTSQTQLLLRC-HEGP-VTGLSLHPTGDYLL 323
Score = 54 (24.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 21/66 (31%), Positives = 26/66 (39%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCLSFHPCGD 236
H VT L HP+ L S S DK D R K I + + FHP G
Sbjct: 306 HEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTG--RLLTKVIDTAEVGLTTAQFHPDG- 362
Query: 237 YMVVGT 242
++ GT
Sbjct: 363 -LIFGT 367
Score = 38 (18.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 194 LASGSKDKTVKMFDYSKS---SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
+ +G DK +F+ ++ K H ++ T V +HP D ++ G+ +R++
Sbjct: 238 ILTGGNDKNATVFNKDTEQMVAILKGHT--KKITKV---IYHPNEDTVITGSPDMNIRIW 292
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 121 (47.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 27/86 (31%), Positives = 48/86 (55%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I +G+ +KIWD S VA F H G E+++++F+ NG +L ++ +D
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFD-GHTG-EVTAISFSENGYFLATAAEDG- 417
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFE 335
V+LW+L R ++ A + +F+
Sbjct: 418 VRLWDLRKLRNFKSFLSADANSVEFD 443
Score = 89 (36.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 142 SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201
S+ IL ++A ++++ D+ ++ TL H ++VT ++F + ++ + S DK
Sbjct: 227 SMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 202 TVKMFDYSKSSVRKAHKTIQE-STFVRCLSFHPCGDYMV 239
TV+++ T+ + S VR ++ HP Y V
Sbjct: 287 TVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFV 325
Score = 74 (31.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
+ + S S DG +D S C+A S + ++ F +G L + S+VK+W+
Sbjct: 322 KYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Query: 315 LSSARCLIAYTG 326
+ S + + G
Sbjct: 382 VKSQANVAKFDG 393
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 152 (58.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 45/183 (24%), Positives = 86/183 (46%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ + ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 196 SSVAIMPNGDHIVSAARDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDGRIYC 258
D+TV+++ + KA E V C+S+ P Y + + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLL 312
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SGS+D IK+WD + C+ T HD + + F GK++LS D +++W+ +
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLV-GHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 319 RCL 321
RC+
Sbjct: 371 RCM 373
Score = 132 (51.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 42/193 (21%), Positives = 88/193 (45%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S ++DKT+KM++ K +E +VR + + G + ++ +R++
Sbjct: 207 IVSAARDKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+ C + + +S +++S + + + G +LLS +D +K+W
Sbjct: 265 TK-ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 314 ELSSARCLIAYTG 326
++S+ CL+ G
Sbjct: 324 DVSTGMCLMTLVG 336
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPIL----ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + A+GS+ K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ S G+ S + D +++WD + +C+ T + AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDG 131
K ME LN +E G L + D P P E ++ H+SP F
Sbjct: 64 KVMELESKLNEAKEEFTSGG-PLGQKRDPKEWIPRPP--EKYALSGHRSPVTRVIFHPVF 120
Query: 132 QLCATGSVDASIKILDVD 149
+ + S DA+IK+ D +
Sbjct: 121 SVMVSASEDATIKVWDYE 138
Score = 47 (21.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETA----YVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + + YET + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATI-KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>TAIR|locus:2018319 [details] [associations]
symbol:MAC3A "AT1G04510" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0005730
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0042742 eggNOG:COG2319 GO:GO:0006397 GO:GO:0045087
GO:GO:0005681 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AY039940 EMBL:AY142564 EMBL:AK221436
IPI:IPI00529251 PIR:E86177 RefSeq:NP_563708.1 UniGene:At.21449
HSSP:P32523 ProteinModelPortal:Q94BR4 SMR:Q94BR4 IntAct:Q94BR4
STRING:Q94BR4 PaxDb:Q94BR4 PRIDE:Q94BR4 DNASU:839503
EnsemblPlants:AT1G04510.1 GeneID:839503 KEGG:ath:AT1G04510
GeneFarm:3007 TAIR:At1g04510 HOGENOM:HOG000177308 InParanoid:Q94BR4
OMA:FPDANSV PhylomeDB:Q94BR4 ProtClustDB:CLSN2687671
Genevestigator:Q94BR4 Uniprot:Q94BR4
Length = 523
Score = 114 (45.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 244 HFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
++ + DG I +G+ +KIWD S VA F H+G EI+S++F+ NG +L +
Sbjct: 356 NYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFG-GHNG-EITSISFSENGYFLAT 413
Query: 304 SGKDSLVKLWEL 315
+ D V+LW+L
Sbjct: 414 AALDG-VRLWDL 424
Score = 96 (38.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 24/99 (24%), Positives = 51/99 (51%)
Query: 142 SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201
S+ IL ++A ++++ D+ ++ TL H ++VT ++F ++ + S DK
Sbjct: 227 SMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDK 286
Query: 202 TVKMFDYSKSSVRKAHKTIQE-STFVRCLSFHPCGDYMV 239
TV+++ S+ + T+++ S VR ++ H Y V
Sbjct: 287 TVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFV 325
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 121 (47.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG KIWD C+ T A +S F+ NGK++L + DS
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA-VSFAKFSPNGKFILVATLDST 236
Query: 310 VKLWELSSARCLIAYTG 326
+KL ++ + L YTG
Sbjct: 237 LKLSNYATGKFLKVYTG 253
Score = 120 (47.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
G +FV + ++ + SGS D I+IW+ + KCV KAH ISS+ F R+G
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMI-KAHS-MPISSVHFNRDGS 183
Query: 300 YLLSSGKDSLVKLWELSSARCL 321
++S+ D K+W+ CL
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCL 205
Score = 82 (33.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++TL H ++C++F +LAS S DKT M +S ++ H+ S+ + L++
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKT--MILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYC 258
Y +D LR++ + C
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYEC 120
Score = 78 (32.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE--ISSLTFTRNGKYLLSSGKD 307
+S +G+ + D +K+ + + K + ++ H I+S NGKY++S +D
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYT-GHTNKVFCITSAFSVTNGKYIVSGSED 279
Query: 308 SLVKLWELSSARCL 321
+ V LW+L + L
Sbjct: 280 NCVYLWDLQARNIL 293
Score = 73 (30.8 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VR--KAH 217
++ L H V C+ F+P + ++ SGS D+T+++++ VR KAH
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAH 169
Score = 69 (29.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 23/109 (21%), Positives = 52/109 (47%)
Query: 143 IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKT 202
+K + +LA +S++ + + +I H ++ L + + S S D T
Sbjct: 49 VKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCT 108
Query: 203 VKMFDYSKSSVRKAHKTIQEST-FVRCLSFHPCGDYMVVGTDHFVLRLY 250
++++D S + K ++ T FV C++F+P + +V G+ +R++
Sbjct: 109 LRIWD--ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Score = 43 (20.2 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASI 143
H + FS DG L A+ SVD ++
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTM 67
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 45/182 (24%), Positives = 86/182 (47%)
Query: 146 LDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAPILASGSKDKTVK 204
++ D + + E + +Q + +T+ +++ + ++F P + L +GS D ++
Sbjct: 191 MEFDLFKGEVPFKKIESEEEQITTVLDKTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIE 250
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264
++DY+ + K+ L++ D+M+ D + +S DG +GS D
Sbjct: 251 VWDYNTGKLSKS------------LAYQSNDDFMM-HDDAILCIAFSKDGEFLATGSLDN 297
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324
IK+W S KC+ F AH ++ L F+RN +LS DS +K+ L S + L +
Sbjct: 298 KIKVWQIKSGKCLRKFEPAHTNG-VTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIF 356
Query: 325 TG 326
G
Sbjct: 357 RG 358
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWD---GVSSKCVATFSK----AHDGAEISSLTFTRNGKYLL 302
+S D + +GS DG I++WD G SK +A S HD A I + F+++G++L
Sbjct: 233 FSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDA-ILCIAFSKDGEFLA 291
Query: 303 SSGKDSLVKLWELSSARCLIAYTGAGSMG 331
+ D+ +K+W++ S +CL + A + G
Sbjct: 292 TGSLDNKIKVWQIKSGKCLRKFEPAHTNG 320
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 161 (61.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 42/131 (32%), Positives = 70/131 (53%)
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P ++ASGS DKTV ++D + + + T+ ++ V+ + D+M D
Sbjct: 183 PDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDN--VKISQINSYSDHM----DTVSQV 236
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+ DG S S D IKI D S+K + ++ AHD A+++S++ G +L S+G DS
Sbjct: 237 LFHPDGTCLISSSFDHKIKITDIRSNKLIQHYN-AHD-AQVNSISIHPTGYFLASAGSDS 294
Query: 309 LVKLWELSSAR 319
+K+W+L R
Sbjct: 295 KIKIWDLRQGR 305
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDG-VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
YS DG S +D I++W V SKC + KAH GA I S++F+ +G YLLSS D
Sbjct: 97 YSPDGETIASCGQDRQIRLWQNTVQSKC--SIIKAHCGA-IRSMSFSADGGYLLSSSDDK 153
Query: 309 LVKLWELSSARCLIAYTG 326
+KLW L + + ++ G
Sbjct: 154 TLKLWRLQDKKFMCSFAG 171
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD--RMLAKSSMESSEPQNDQQGHPVIRTL 175
HK+ R+G S D +L A+GS D ++ + D++ ++++K S + Q I +
Sbjct: 172 HKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQ-----INSY 226
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
DH++ V+ + FHP L S S D +K+ D + + + H ++ V +S HP G
Sbjct: 227 SDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQ-HYNAHDAQ-VNSISIHPTG 284
Query: 236 DYMV-VGTDHFVLRLYSSDGR-IYCSGSKDGDI 266
++ G+D + GR IY S D DI
Sbjct: 285 YFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI 317
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 141 ASIKILDVDRMLAKSSMESSEPQNDQQGH-PVI-RTLYDHIEEVTCLEFHPSAPILASGS 198
AS + + +K SS+ Q H P + R+ H + +TC +F P +AS S
Sbjct: 7 ASSAVASQKQTQSKLGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCS 66
Query: 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFVLRLYSSDGRIY 257
KD V ++++ ++ K + V C+ + P G+ + G D + RL+ + +
Sbjct: 67 KDSIVYVWNFKPQ--QRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQI-RLWQNTVQSK 123
Query: 258 CS 259
CS
Sbjct: 124 CS 125
Score = 77 (32.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G S D IKIWD + + T ++D +I+++ F ++G Y + G +L +W
Sbjct: 284 GYFLASAGSDSKIKIWDLRQGRQIYTLY-SND-KDITTVQFNQSGDYFATGGSQNLCMVW 341
Query: 314 E 314
+
Sbjct: 342 K 342
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT-------------FTRN 297
S D R+ SGS D + +WD K V+ +S D +IS + F +
Sbjct: 182 SPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD 241
Query: 298 GKYLLSSGKDSLVKLWELSSARCLIAY 324
G L+SS D +K+ ++ S + + Y
Sbjct: 242 GTCLISSSFDHKIKITDIRSNKLIQHY 268
Score = 72 (30.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+DG S S D +K+W K + +F+ H + S + + + + S D
Sbjct: 139 FSADGGYLLSSSDDKTLKLWRLQDKKFMCSFA-GHKNW-VRSGVISPDMRLVASGSDDKT 196
Query: 310 VKLWELSSARCLIAYT 325
V LW+L+ + + Y+
Sbjct: 197 VMLWDLNFQKIVSKYS 212
Score = 46 (21.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
Q + + + +H R+ +FS DG + S D ++K+
Sbjct: 121 QSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKL 157
Score = 38 (18.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 106 EPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
+P Q +V HK +S DG+ A+ D I++
Sbjct: 77 KPQQRPFKFV-GHKGAVYCVKYSPDGETIASCGQDRQIRL 115
>SGD|S000003648 [details] [associations]
symbol:MDV1 "Peripheral protein of cytosolic face of
mitochondrial outer membrane" species:4932 "Saccharomyces
cerevisiae" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI;IMP]
[GO:0000266 "mitochondrial fission" evidence=IGI;IMP;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016559 "peroxisome fission"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003648 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 EMBL:BK006943
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0016559 GO:GO:0043130 GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 GO:GO:0000266 PDB:2PQN
PDB:3UUX PDBsum:2PQN PDBsum:3UUX EMBL:Z49387 PIR:S56893
RefSeq:NP_012423.1 PDB:2XU6 PDBsum:2XU6 ProteinModelPortal:P47025
SMR:P47025 DIP:DIP-1907N IntAct:P47025 MINT:MINT-389558
STRING:P47025 PaxDb:P47025 EnsemblFungi:YJL112W GeneID:853332
KEGG:sce:YJL112W CYGD:YJL112w OMA:YSSPYKK EvolutionaryTrace:P47025
NextBio:973700 Genevestigator:P47025 GermOnline:YJL112W
InterPro:IPR021061 Pfam:PF11542 Uniprot:P47025
Length = 714
Score = 161 (61.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 136 TGSVDASIKI--LDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
TG DA++K+ L++ + L + + + P N P + T H +EVT L PS
Sbjct: 458 TGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDS-PCVHTFEAHTDEVTALSLDPS--F 514
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM--VVGTDH----FVL 247
L SGS+D+T++ +D K +TI S F L+ D + T +
Sbjct: 515 LVSGSQDRTIRQWDLRSG---KCLQTIDLS-FANVLTTSTNVDLSKSTLLTQRNERPSIG 570
Query: 248 RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
L S D + +G+KDG +++WD S K + T K H A I+SL F + L++ D
Sbjct: 571 ALQSFDAAL-ATGTKDGVVRLWDLRSGKVIRTL-KGHTDA-ITSLKF--DSACLVTGSYD 625
Query: 308 SLVKLWEL 315
V++W+L
Sbjct: 626 RTVRIWDL 633
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 178 HIEEVTCLEFH-PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + +TCL+F P + +G D TVK++D SK + K + + C+ +
Sbjct: 397 HDDFLTCLDFDAPFGTLCTAGYLDHTVKIWDLSKQN--KIGELAGHLATINCMQINRDYG 454
Query: 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
+V G L+L++ + + + S CV TF +AH E+++L+
Sbjct: 455 TLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVHTF-EAHTD-EVTALSL-- 510
Query: 297 NGKYLLSSGKDSLVKLWELSSARCL 321
+ +L+S +D ++ W+L S +CL
Sbjct: 511 DPSFLVSGSQDRTIRQWDLRSGKCL 535
Score = 47 (21.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 131 GQLCATGSVDASIKILDVDR 150
G LC G +D ++KI D+ +
Sbjct: 411 GTLCTAGYLDHTVKIWDLSK 430
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 147 (56.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 48/184 (26%), Positives = 92/184 (50%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 25 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 83
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV--------VGTDHFVLR-LY 250
D+TV+++ + KA E V C+S+ P Y VG D++V L+
Sbjct: 84 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSEVGHDNWVRGVLF 141
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S G+ S + D +++WD + +C+ T + AH+ ++SL F + Y+++ D V
Sbjct: 142 HSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF-VTSLDFHKTAPYVVTGSVDQTV 199
Query: 311 KLWE 314
K+WE
Sbjct: 200 KVWE 203
Score = 116 (45.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 42/169 (24%), Positives = 72/169 (42%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA---HKTI- 220
D QG IRT++ H V+ + P+ + S S+DKT+KM++ K H+
Sbjct: 7 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 66
Query: 221 ------QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC-SGSKDGDIKIWDGVS 273
Q+ T + S VV T L + + C S + + + +S
Sbjct: 67 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS---YSSIS 123
Query: 274 SKCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
AT S+ HD + + F GK++LS D +++W+ + RC+
Sbjct: 124 E---ATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 168
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 266 IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325
IK+WD +C+ T HD +SS+ NG +++S+ +D +K+WE+ + C+ +T
Sbjct: 3 IKLWDFQGFECIRTMH-GHDH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 60
Query: 326 G 326
G
Sbjct: 61 G 61
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 41/160 (25%), Positives = 79/160 (49%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ + +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKG-VTCLSFSKDSTQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S +CL + G S E TLT D
Sbjct: 323 LSASFDQTIRIHGLKSGKCLKEFRGHSSFVN--EATLTPD 360
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 108 (43.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D +I T + + ++FHPS+ +A+ S D TV+++D ++ + ++ S
Sbjct: 172 DASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQV--HSA 229
Query: 225 FVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGRI-YCSGSKDGDIKIWDGVSSKCVATFSK 282
V LSFHP G++++ + L++ +GR+ Y G S+ CV+ FS+
Sbjct: 230 AVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQG--------SASCVS-FSR 280
Query: 283 AHD 285
+ D
Sbjct: 281 SGD 283
Score = 102 (41.0 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYS---KSSVRKAHKTIQESTFVRCLSFHPC 234
H + VTC++F PSA +LAS S+DKTV+++ S +S + +AH + VR + F
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAH-----TGSVRSVCFSAD 113
Query: 235 GDYMVVGTDHFVLRLYSSDG-RIYCS 259
G ++ +D ++L+S +I C+
Sbjct: 114 GQSLLTASDDQSIKLWSVHRQKIICT 139
Score = 99 (39.9 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TGSV + D +L S +S + + + +I TL +H V C F P ++
Sbjct: 102 TGSVRSVCFSADGQSLLTASDDQSIKLWSVHR-QKIICTLREHNNWVRCARFSPDGQLMV 160
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
S S D+TVK++D SS + H + + + FHP + + +R++
Sbjct: 161 SVSDDRTVKLWD--ASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 96 (38.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+DG+ + S D IK+W K + T + H+ + F+ +G+ ++S D
Sbjct: 110 FSADGQSLLTASDDQSIKLWSVHRQKIICTL-REHNNW-VRCARFSPDGQLMVSVSDDRT 167
Query: 310 VKLWELSSARCLIAYTGAG 328
VKLW+ SS + + + G
Sbjct: 168 VKLWDASSRQLIHTFCEPG 186
Score = 91 (37.1 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
+ S D +++WD + + + + H A +++L+F +G +LL++ DS +K+ +L
Sbjct: 203 TASSDNTVRVWD-IRTHTLLQHYQVHSAA-VNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Query: 319 RCLIAYTGAGSMG 331
R L YT G G
Sbjct: 261 RLL--YTLHGHQG 271
Score = 91 (37.1 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG++ S S D +K+WD S + + TF + G S + F + + ++ D+
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP--GGYSSYVDFHPSSTCIATASSDNT 209
Query: 310 VKLWELSSARCLIAY 324
V++W++ + L Y
Sbjct: 210 VRVWDIRTHTLLQHY 224
Score = 85 (35.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
R H + +T L+F PS +ASGS D +V +++ S +A++ V C+ F
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQS--RAYRFTGHKDAVTCVQFS 69
Query: 233 PCGDYMVVGTDHFVLRLY 250
P + + +RL+
Sbjct: 70 PSAHLLASSSRDKTVRLW 87
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S D +KI D + + + T H G+ S ++F+R+G S+G D
Sbjct: 236 FHPSGNHLLTASSDSTLKILDLLEGRLLYTLH-GHQGSA-SCVSFSRSGDQFASAGSDQQ 293
Query: 310 VKLW 313
V +W
Sbjct: 294 VMVW 297
Score = 66 (28.3 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H R+ FS DGQ T S D SIK+ V R
Sbjct: 94 ESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHR 133
Score = 51 (23.0 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
H+ + FS G+ A+GSVDAS+ +
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMV 44
Score = 41 (19.5 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
AY T HK FS L A+ S D ++++
Sbjct: 53 AYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRL 86
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 137 GSVDASIKILDVDRMLAKSSMESSEPQN------DQQGH-PV--IRTLYDHIEEVTCLEF 187
G D + I D+ +A +EP + Q H P +R L H EV +
Sbjct: 214 GDADREMVIDQTDKEIAGDGSTGAEPMDIVMTPTSQTSHIPNSDVRILEGHTSEVCACAW 273
Query: 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247
PSA +LASGS D T +++ + S + H + + L H G D L
Sbjct: 274 SPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI--LK-HAKGKSNEKSKDVTTL 330
Query: 248 RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
++ +G + +GS DG +IW ++ + ++T SK H G I SL + + G YLL+ D
Sbjct: 331 D-WNGEGTLLATGSCDGQARIWT-LNGELISTLSK-HKGP-IFSLKWNKKGDYLLTGSVD 386
Query: 308 SLVKLWELSS 317
+W++ +
Sbjct: 387 RTAVVWDVKA 396
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
+T H EV C+++ P+ +LAS S D T K+++ +S+ H + + + + +
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTF--VHDLREHTKEIYTIRWS 499
Query: 233 PCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292
P G GT++ +L S S D +K+WD K + +F+ + + SL
Sbjct: 500 PTGP----GTNNPNKQL------TLASASFDSTVKLWDAELGKMLCSFNGHRE--PVYSL 547
Query: 293 TFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
F+ NG+Y+ S D + +W + + + YTG G +
Sbjct: 548 AFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGI 585
>UNIPROTKB|Q5R9T6 [details] [associations]
symbol:WDR55 "WD repeat-containing protein 55" species:9601
"Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 CTD:54853 HOVERGEN:HBG054778
InterPro:IPR017422 PIRSF:PIRSF038169 EMBL:CR859296
RefSeq:NP_001125868.1 UniGene:Pab.10085 ProteinModelPortal:Q5R9T6
GeneID:100172799 KEGG:pon:100172799 InParanoid:Q5R9T6
Uniprot:Q5R9T6
Length = 383
Score = 108 (43.1 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 242 TDHFVLRLYSSDGRI------YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+D F LR S D + C+GS DG I+ + + ++ V + + H G + L +
Sbjct: 246 SDRFALRAESIDCMVPVTESLLCTGSTDGVIRAVNILPNRVVGSVGQ-HTGEPVGELALS 304
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLI 322
G++L SSG D +K W+++ R ++
Sbjct: 305 HCGRFLASSGHDQRLKFWDMAQLRAVV 331
Score = 85 (35.0 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 35/107 (32%), Positives = 46/107 (42%)
Query: 68 PDRMKRMEPSIGLN-PIQEILIGPGLDLEFESDVDPS----APEPAQYETAYVTS---HK 119
P R++ I L P + P DL DVD + + ET + S H
Sbjct: 25 PTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHL 84
Query: 120 SPCRAGAFSIDGQLCATGSVDASIKILDVD--RMLAKSSMESSEPQN 164
CRA AFS DGQ T S D +I +LDV+ R+ + S P N
Sbjct: 85 KACRAVAFSEDGQKLVTVSKDKAIHVLDVEQGRLERRISKAHGAPIN 131
Score = 68 (29.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 148 VDRMLAKSSME--SSEPQNDQQGHPV-IR-TLYDHIEEVTC--LEFHPSAPILASGSKDK 201
+DR + E S E D P IR T D + E L FHP+ +LA+G D
Sbjct: 1 MDRTCEERPAEDGSDEEDPDSMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDG 60
Query: 202 TVKMFDYS--KSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFVLRLYSSDGRI 256
V +F YS + ++ + R ++F G +V V D + L GR+
Sbjct: 61 DVFVFSYSCQEGETKELWSSGHHLKACRAVAFSEDGQKLVTVSKDKAIHVLDVEQGRL 118
Score = 49 (22.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 31/133 (23%), Positives = 46/133 (34%)
Query: 90 PGLDLEFESDVDPSAPEPAQY-ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
P D E D D S P + +T ++P AF L A G VD + +
Sbjct: 9 PAEDGSDEEDPD-SMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSY 67
Query: 149 DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208
S E + GH H++ + F L + SKDK + + D
Sbjct: 68 ------SCQEGETKELWSSGH--------HLKACRAVAFSEDGQKLVTVSKDKAIHVLDV 113
Query: 209 SKSS----VRKAH 217
+ + KAH
Sbjct: 114 EQGRLERRISKAH 126
Score = 48 (22.0 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 15/90 (16%), Positives = 38/90 (42%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
DQ+ + + H E + + P+ +L + S D + +F+ + + +S
Sbjct: 154 DQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEP--QSG 211
Query: 225 FVRCLSFHPCGDYMVVGTDHFVLRLYSSDG 254
+ ++ CG + G+ + L++ +G
Sbjct: 212 DLTSVTLMKCGKKVACGSSEGTIYLFNWNG 241
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 154 (59.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
I+T H EV +++ P +LAS S D T+K++ ++ R H S + + +
Sbjct: 527 IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRD--RCCHDLQAHSKEIYTIKW 584
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G GT++ + I S S D +++WD C+ T +K H + S
Sbjct: 585 SPTGP----GTNN------PNTNLILASASFDSTVRLWDVERGSCIHTLTK-HT-EPVYS 632
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GK+L S D V +W + + + +Y G G +
Sbjct: 633 VAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGGI 671
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
R L H EV ++PS +LASGS D T +++D S ++ ++ C+
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRH-----CIQK- 402
Query: 233 PCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292
G V ++ DG + +GS DG +IW + +T + H G I +L
Sbjct: 403 --GGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWK-TDGRLASTLGQ-HKGP-IFAL 457
Query: 293 TFTRNGKYLLSSGKDSLVKLWELSSARC 320
+ + G Y+LS+G D +W+ S+ +C
Sbjct: 458 KWNKCGNYILSAGVDKTTIIWDASTGQC 485
Score = 53 (23.7 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
++ DG L ATGS D +I D LA + + P
Sbjct: 418 WNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGP 453
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 155 (59.6 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H S + + +
Sbjct: 351 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC--VHDLQAHSKEIYTIKW 408
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G GT + + + S S D +++WD C+ T +K + + S
Sbjct: 409 SPTGP----GTSN------PNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQE--PVYS 456
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 457 VAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGGI 495
Score = 124 (48.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++S + + + C+
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLR----HCIRE--- 226
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + +GS DG +IW +T + H G I +L +
Sbjct: 227 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLASTLGQ-HKGP-IFALKW 283
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 284 NKKGNYILSAGVDKTTIIWD 303
Score = 48 (22.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L ATGS D +I D LA + + P
Sbjct: 245 DGTLLATGSYDGFARIWTEDGNLASTLGQHKGP 277
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 147 (56.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 48/184 (26%), Positives = 92/184 (50%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + Q G+ ++T H E V + + ++AS S
Sbjct: 28 SSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSN 86
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV--------VGTDHFVLR-LY 250
D+TV+++ + KA E V C+S+ P Y VG D++V L+
Sbjct: 87 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESSYSSISEATGSEVGHDNWVRGVLF 144
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S G+ S + D +++WD + +C+ T + AH+ ++SL F + Y+++ D V
Sbjct: 145 HSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF-VTSLDFHKTAPYVVTGSVDQTV 202
Query: 311 KLWE 314
K+WE
Sbjct: 203 KVWE 206
Score = 120 (47.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320
S D IK+WD +C+ T HD +SS+ NG +++S+ +D +K+WE+ + C
Sbjct: 1 SADMTIKLWDFQGFECIRTMH-GHDH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 58
Query: 321 LIAYTG 326
+ +TG
Sbjct: 59 VKTFTG 64
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 42/169 (24%), Positives = 72/169 (42%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA---HKTI- 220
D QG IRT++ H V+ + P+ + S S+DKT+KM++ K H+
Sbjct: 10 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 69
Query: 221 ------QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC-SGSKDGDIKIWDGVS 273
Q+ T + S VV T L + + C S + + + +S
Sbjct: 70 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS---YSSIS 126
Query: 274 SKCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
AT S+ HD + + F GK++LS D +++W+ + RC+
Sbjct: 127 E---ATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 171
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 149 (57.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDR-----MLAKSSMESSEPQNDQQGHPVIRTLYDHIE 180
+F+ L ATGS+D + K+ D+ L S E + G +I +DH
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH--KTIQ--ESTFVRCLSFHPCGD 236
V + IL + + F++ S + KT + ++T +C++
Sbjct: 244 VVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA------ 297
Query: 237 YMVVGTDHFVL-RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+ G D +L + G++ + S DG +I+ + KC+A + H+G EIS ++F
Sbjct: 298 -TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKL-EGHEG-EISKISFN 354
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
G +LL+ D ++W+ + +CL G
Sbjct: 355 PQGNHLLTGSSDKTARIWDAQTGQCLQVLEG 385
Score = 113 (44.8 bits), Expect = 7.4e-09, Sum P(3) = 7.4e-09
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
T H E+ CL F+P + ++A+GS D T K++D + + S + LSF+
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE--EVYTLRGHSAEIISLSFNT 229
Query: 234 CGDYMVVGT-DHFVLRLYSSDGR 255
GD ++ G+ DH V+ + GR
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGR 252
Score = 86 (35.3 bits), Expect = 7.4e-09, Sum P(3) = 7.4e-09
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ G +GS D +IWD + +C+ D EI S F G +++ KD+
Sbjct: 353 FNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTD--EIFSCAFNYKGNIVITGSKDNT 410
Query: 310 VKLW 313
++W
Sbjct: 411 CRIW 414
Score = 72 (30.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 24/100 (24%), Positives = 47/100 (47%)
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS---SVRKAHKT 219
QN + + L HI +T + + S +GS D+T K++D + + + H+
Sbjct: 76 QNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRN 135
Query: 220 IQESTFVRCLSFH-PCGDYMVVGTDHFVLRLYSSD-GRIY 257
+ V ++F+ P GD + G+ +L+S + G+ Y
Sbjct: 136 V-----VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCY 170
Score = 41 (19.5 bits), Expect = 7.4e-09, Sum P(3) = 7.4e-09
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVD 149
H++ A AF+ G ATGS D + K+ V+
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Score = 38 (18.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+H P A + G TGS D + K+ D
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 130 (50.8 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186
FS D ++ A G D+ IKI +D + ++ + ND+ P +TL H V
Sbjct: 474 FSDDCRIAAAGFQDSYIKIWSLDGS-SLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTS 532
Query: 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246
F P L SGS+DKTV+++ + ++K + +SF P G Y +
Sbjct: 533 FSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWD--VSFSPLGHYFATASHDQT 590
Query: 247 LRLYSSDGRIY 257
RL+S D IY
Sbjct: 591 ARLWSCD-HIY 600
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 52/214 (24%), Positives = 89/214 (41%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES-SEPQNDQQ----GH 169
+ H + +FS D + +GS D ++++ +D A S + + P D GH
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 170 PVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
+D + +C +P I A D F + V S+ C
Sbjct: 581 YFATASHDQTARLWSCDHIYPLR-IFAGHLNDVDCVSFHPNGCYV------FTGSSDKTC 633
Query: 229 LSFH-PCGDYMVVGTDHF--VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
+ GD + + H V+ + DGR +GS+DG I +WD + K + + H
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQM-RGH 692
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
I SL++++ G L+S G D V++W+L A
Sbjct: 693 GKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKA 726
Score = 79 (32.9 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ +G +GS D ++WD + V F H A + S+ +G++L + +D +
Sbjct: 617 FHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFL-GHT-APVISIAVCPDGRWLSTGSEDGI 674
Query: 310 VKLWELSSARCLIAYTGAG 328
+ +W++ + + L G G
Sbjct: 675 INVWDIGTGKRLKQMRGHG 693
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 155 (59.6 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 47/184 (25%), Positives = 88/184 (47%)
Query: 149 DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208
D++++ S ++ + G+ I+TL H + V + +AS S D+T+K ++
Sbjct: 203 DQLISSSRDKTIKVWEAATGY-CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Query: 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG----TDHFVLRLYSSDGRIY---C--- 258
K ++ + S V CL+F + G T ++ G C
Sbjct: 262 VKGECLATYR--EHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYL 319
Query: 259 -SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS+D IKIW+ + +C+AT+ HD + ++ F GK+LLS G D +++W+++
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYI-GHDNW-VRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 318 ARCL 321
RC+
Sbjct: 378 GRCI 381
Score = 138 (53.6 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
LA+GS+DKT+K+++ + + I +VR + FHPCG +++
Sbjct: 319 LATGSRDKTIKIWELATGRCLATY--IGHDNWVRAVRFHPCGKFLL-------------- 362
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
S D I++WD +C+ T ++AH IS L F + ++ + G D ++K+W
Sbjct: 363 -----SVGDDKTIRVWDIAQGRCIKTINEAHTHF-ISCLDFCLHNPHIATGGVDDVIKVW 416
Query: 314 EL 315
+L
Sbjct: 417 KL 418
Score = 134 (52.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 142 SIKILDVDR---MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198
+++ +D D+ +LA S + + D Q + ++TL+ H V+C+ F PS L S S
Sbjct: 150 AVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSS 209
Query: 199 KDKTVKMFDYSKSSVRKA---HKT-IQESTFVR---CLSFHPCGDYMVVGTDHFV----L 247
+DKT+K+++ + K H+ +++ T C++ C + + T + V L
Sbjct: 210 RDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIA--SCSNDQTIKTWNIVKGECL 267
Query: 248 RLYSSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
Y + C +I G SK G +L + G YL + +
Sbjct: 268 ATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPG-GNLV-GQCG-YLATGSR 324
Query: 307 DSLVKLWELSSARCLIAYTG 326
D +K+WEL++ RCL Y G
Sbjct: 325 DKTIKIWELATGRCLATYIG 344
Score = 43 (20.2 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAP----EPAQYETAYVTSHKSPCRAGAFSIDGQLCAT 136
N I + P L + D + E ++E + H + + F G L A+
Sbjct: 107 NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERT-LKGHTNAVQDIDFDKTGNLLAS 165
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 166 CSADLTIKLWD 176
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 235 GDYMVVGTDHFVLRLY----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290
G YM H V +Y S+D R+ SGSKD +K+W V +K +A H E+
Sbjct: 407 GQYMATFRGH-VQAVYTVAWSADSRLIVSGSKDSTLKVWS-VQTKKLAQELPGH-ADEVF 463
Query: 291 SLTFTRNGKYLLSSGKDSLVKLW 313
+ + +G + S GKD ++KLW
Sbjct: 464 GVDWAPDGSRVASGGKDKVIKLW 486
Score = 93 (37.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/70 (25%), Positives = 40/70 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS D ++ S S D +++W + +ATF + H A + ++ ++ + + ++S KDS
Sbjct: 383 YSPDVKLIASASFDKSVRLWRASDGQYMATF-RGHVQA-VYTVAWSADSRLIVSGSKDST 440
Query: 310 VKLWELSSAR 319
+K+W + + +
Sbjct: 441 LKVWSVQTKK 450
Score = 89 (36.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 161 EPQNDQQGHPVIR---TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH 217
+PQ + PV R ++ H E V L F P LASGS D TV+++D + + H
Sbjct: 98 QPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTET---PH 154
Query: 218 KTIQ-ESTFVRCLSFHPCGDYMVVG 241
T +V C+S+ P G + G
Sbjct: 155 FTCTGHKQWVLCVSWAPDGKRLASG 179
Score = 79 (32.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
R S S DGD +IWD +C+ + H A ++++ + G + +S KD VK+W
Sbjct: 222 RKLASASGDGDCRIWDVKLGQCLMNIA-GHTNA-VTAVRWGGAG-LIYTSSKDRTVKMWR 278
Query: 315 LSSARCLIAYTG 326
+ ++G
Sbjct: 279 AADGILCRTFSG 290
Score = 72 (30.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
S S D + +W +KCV + H ++ + ++ + K + S+ D V+LW S
Sbjct: 350 SCSDDNTLYLWRNNQNKCVERMT-GHQNV-VNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 319 RCLIAYTG 326
+ + + G
Sbjct: 408 QYMATFRG 415
Score = 50 (22.7 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
+N+Q + + + H V +++ P ++AS S DK+V+++
Sbjct: 361 RNNQ--NKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW 402
Score = 48 (22.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMF 206
H VT + + A ++ + SKD+TVKM+
Sbjct: 250 HTNAVTAVRWG-GAGLIYTSSKDRTVKMW 277
Score = 47 (21.6 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
T+ + H + FS DG A+GS D ++++ D++
Sbjct: 112 TSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLN 149
Score = 42 (19.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
+T H++ +S D +L A+ S D S+++
Sbjct: 371 MTGHQNVVNDVKYSPDVKLIASASFDKSVRL 401
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 121 (47.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+G + S+G D VK+W++ + L Y
Sbjct: 196 PSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Score = 110 (43.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+PS +AS D+TVK++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V C+SFHP +Y+V + L++ +GR IY G +
Sbjct: 217 VNKLLQHYQV--HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 36/129 (27%), Positives = 56/129 (43%)
Query: 121 PCRAGAFS-IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179
P + G FS SVD S + LA +S + S + +LY H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVDFSAD----GQFLATASEDKSIKVWSMYRQRFLYSLYRHT 144
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLSFHPCGDYM 238
V C +F P ++ S S+DKT+K++D + K V ++ + FV F+P G +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCI 201
Query: 239 V-VGTDHFV 246
G+D V
Sbjct: 202 ASAGSDQTV 210
Score = 92 (37.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV ++ G S D +K+WD +K + + + H G ++ ++F +
Sbjct: 186 VGFANFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGG-VNCISFHPSDN 241
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339
YL+++ D +K+ +L R + YT G G F ++ +
Sbjct: 242 YLVTASSDGTLKILDLLEGRLI--YTLQGHTGPVFTVSFS 279
Score = 81 (33.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
+ + SD + + S DG +KI D + + + T + H G + +++F++ G+ S G
Sbjct: 234 ISFHPSDNYLV-TASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFASGGA 290
Query: 307 DSLVKLW 313
D+ V LW
Sbjct: 291 DTQVLLW 297
Score = 80 (33.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 141 ASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197
A+I LD+ + LA +S ++ + + H H + VT ++F P +LAS
Sbjct: 19 AAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASA 78
Query: 198 SKDKTVKMF--DY-SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS 251
S+D+TV+++ D K S KAH + VR + F G ++ ++ ++++S
Sbjct: 79 SRDRTVRLWIPDKRGKFSEFKAH-----TAPVRSVDFSADGQFLATASEDKSIKVWS 130
Score = 74 (31.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQ AT S D SIK+ + R
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 68 PD-RMKRMEPSIGLNPIQEI-LIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
PD R K E P++ + G L S+ D S + Y ++ S H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE-DKSIKVWSMYRQRFLYSLYRHTHWV 147
Query: 123 RAGAFSIDGQLCATGSVDASIKILD 147
R FS DG+L + S D +IKI D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 43 (20.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
YV HK + FS G L A+ S D ++++ D+
Sbjct: 56 YV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK 91
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 121 (47.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+G + S+G D VK+W++ + L Y
Sbjct: 196 PSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+PS +AS D+TVK++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V C+SFHP G+Y++ + L++ +GR IY G +
Sbjct: 217 VNKLLQHYQV--HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV ++ G S D +K+WD +K + + + H G ++ ++F +G
Sbjct: 186 VGFANFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGG-VNCISFHPSGN 241
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339
YL+++ D +K+ +L R + YT G G F ++ +
Sbjct: 242 YLITASSDGTLKILDLLEGRLI--YTLQGHTGPVFTVSFS 279
Score = 97 (39.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 36/129 (27%), Positives = 56/129 (43%)
Query: 121 PCRAGAFS-IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179
P + G FS SVD S + LA +S + S + +LY H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVDFSAD----GQFLATASEDKSIKVWSMYRQRFLYSLYRHT 144
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLSFHPCGDYM 238
V C +F P ++ S S+DKT+K++D + K V ++ + FV F+P G +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCI 201
Query: 239 V-VGTDHFV 246
G+D V
Sbjct: 202 ASAGSDQTV 210
Score = 83 (34.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D + + + T + H G + +++F++ G+ S G D+
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFASGGADTQ 293
Query: 310 VKLW 313
V LW
Sbjct: 294 VLLW 297
Score = 80 (33.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 141 ASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197
A+I LD+ + LA +S ++ + + H H + VT ++F P +LAS
Sbjct: 19 AAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASA 78
Query: 198 SKDKTVKMF--DY-SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS 251
S+D+TV+++ D K S KAH + VR + F G ++ ++ ++++S
Sbjct: 79 SRDRTVRLWIPDKRGKFSEFKAH-----TAPVRSVDFSADGQFLATASEDKSIKVWS 130
Score = 74 (31.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQ AT S D SIK+ + R
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Score = 53 (23.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 68 PD-RMKRMEPSIGLNPIQEI-LIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
PD R K E P++ + G L S+ D S + Y ++ S H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE-DKSIKVWSMYRQRFLYSLYRHTHWV 147
Query: 123 RAGAFSIDGQLCATGSVDASIKILD 147
R FS DG+L + S D +IKI D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
YV HK + FS G L A+ S D ++++ D+
Sbjct: 56 YV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK 91
>WB|WBGene00010631 [details] [associations]
symbol:cash-1 species:6239 "Caenorhabditis elegans"
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0002009 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0040035 EMBL:Z71181 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 EMBL:Z71177 PIR:T18598
RefSeq:NP_505664.2 ProteinModelPortal:G5EE12 SMR:G5EE12
IntAct:G5EE12 EnsemblMetazoa:K07C5.8 GeneID:179445
KEGG:cel:CELE_K07C5.8 CTD:179445 WormBase:K07C5.8 OMA:IRFWDNT
NextBio:905428 Uniprot:G5EE12
Length = 678
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 57/207 (27%), Positives = 88/207 (42%)
Query: 139 VDASIKILDVDRMLAKSSM--ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196
+D ++ + D D M K E +P Q + TL H++ + ++FHP P+L +
Sbjct: 317 LDVALGMQDNDNMDIKDEFKDEDDDPNAQQVKWNIKVTLRSHLDSIRAMQFHPVEPVLFT 376
Query: 197 GSKDKTVKMF--DYSKSSVRKAHKTIQES--TF------VRCLSFHPCGDYMVVGTDHFV 246
S+D +K++ D K + T E TF V CL P GD++ G
Sbjct: 377 ASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPTGDHLYTG----- 431
Query: 247 LRLYSSDGRIYCSG--SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
DG I C S +GD +D + + H A I S+ + + L+S+
Sbjct: 432 ----GIDGNICCFNVPSSNGDP--FDSYDPRVLTETLTGHTDA-IWSVAYHSSNSRLVSA 484
Query: 305 GKDSLVKLWELSSARCLIAYTGAGSMG 331
DS V+LWE + LI GA G
Sbjct: 485 SSDSTVRLWEPGNGEPLIRTIGAPKSG 511
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 139 (54.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS DG + S+DG IK+WD S C+ATF + H + ++++ F + G+ + SS D
Sbjct: 353 YSPDGSRVVTASEDGKIKVWDITSGFCLATFEE-HTSS-VTAVQFAKRGQVMFSSSLDGT 410
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
V+ W+L R +TG + QF L VD
Sbjct: 411 VRAWDLIRYRNFRTFTGTERI--QFNC-LAVD 439
Score = 67 (28.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 40/140 (28%), Positives = 51/140 (36%)
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP--VIRTLYDHIEE--- 181
+S D + T S D S KI VD S E + GH V+ + H +E
Sbjct: 154 WSQDSRFILTTSKDLSAKIWSVD------SEEKNLAATTFNGHRDYVMGAFFSHDQEKIY 207
Query: 182 -------VTCLEF--HPSAPILASGSKDKTVKMFDYSKSSVR--KAHKTIQESTFVRCLS 230
V EF PS D + D SK S R K H V+C++
Sbjct: 208 TVSKDGAVFVWEFTKRPSDDDDNESEDDDKQEEVDISKYSWRITKKHFFYANQAKVKCVT 267
Query: 231 FHPCGDYMVVGTDHFVLRLY 250
FHP + VG RLY
Sbjct: 268 FHPATRLLAVGFTSGEFRLY 287
Score = 65 (27.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD- 177
K C A FS DG+L A AS + L + ++ + D+Q P +R
Sbjct: 96 KEKCSAVKFSPDGRLFAL----ASGRFLQI--------WKTPDVNKDRQFAPFVRHRVHA 143
Query: 178 -HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H +++T L + + + + SKD + K++ SV K + +TF + H D
Sbjct: 144 GHFQDITSLTWSQDSRFILTTSKDLSAKIW-----SVDSEEKNLAATTF----NGHR--D 192
Query: 237 YMVVGT--DHFVLRLY--SSDGRIY 257
Y V+G H ++Y S DG ++
Sbjct: 193 Y-VMGAFFSHDQEKIYTVSKDGAVF 216
Score = 61 (26.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 25/134 (18%), Positives = 54/134 (40%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT--- 174
H+ FS D + T S D ++ + + + + SE + Q+ + +
Sbjct: 190 HRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRPSDDDDNESEDDDKQEEVDISKYSWR 249
Query: 175 ------LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
Y + +V C+ FHP+ +LA G +++D ++ + Q V
Sbjct: 250 ITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNP--VNT 307
Query: 229 LSFHPCGDYMVVGT 242
+S + G+++ G+
Sbjct: 308 VSVNQTGEWLAFGS 321
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 150 (57.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H S + + +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHDLQAHSKEIYTIKW 412
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G + +L S S D +++WD C+ T +K + + S
Sbjct: 413 SPTGPATSNPNSNIML----------ASASFDSTVRLWDVERGVCIHTLTKHQE--PVYS 460
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 461 VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGI 499
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++S + + + C+
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR----HCIRE--- 230
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + +GS DG +IW +T + H G I +L +
Sbjct: 231 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLASTLGQ-HKGP-IFALKW 287
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 288 NKKGNYILSAGVDKTTIIWD 307
Score = 48 (22.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L ATGS D +I D LA + + P
Sbjct: 249 DGTLLATGSYDGFARIWTEDGNLASTLGQHKGP 281
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 150 (57.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H S + + +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHDLQAHSKEIYTIKW 412
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G + +L S S D +++WD C+ T +K + + S
Sbjct: 413 SPTGPATSNPNSNIML----------ASASFDSTVRLWDVERGVCIHTLTKHQE--PVYS 460
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 461 VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGI 499
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++S + + + C+
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR----HCIRE--- 230
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + +GS DG +IW +T + H G I +L +
Sbjct: 231 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLASTLGQ-HKGP-IFALKW 287
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 288 NKKGNYILSAGVDKTTIIWD 307
Score = 48 (22.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L ATGS D +I D LA + + P
Sbjct: 249 DGTLLATGSYDGFARIWTEDGNLASTLGQHKGP 281
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 132 (51.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 48/211 (22%), Positives = 91/211 (43%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDR-----MLAKSSMESSEPQNDQQGHPVIRTLYDHIE 180
+F+ L ATGS+D + K+ D+ L S E + G+ +I +DH
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTV 243
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH--KTIQ--ESTFVRCLSFHPCGD 236
V + L + + +F++ S + KT + ++ +C++
Sbjct: 244 TVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA------ 297
Query: 237 YMVVGTDHFVL-RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+ G D +L + G++ + S DG +I+ + +CV T + H+G EIS ++F
Sbjct: 298 -TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECV-TKLEGHEG-EISKISFN 354
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
G LL+ D ++W+ + +CL G
Sbjct: 355 PQGNRLLTGSSDKTARIWDAQTGQCLQVLEG 385
Score = 108 (43.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
T H E+ CL F+P + ++A+GS D T K++D S + S + LSF+
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ--SGEEVFTLTGHSAEIISLSFNT 229
Query: 234 CGDYMVVGT-DHFVLRLYSSDGR-IY 257
G+ ++ G+ DH V + GR +Y
Sbjct: 230 SGNRIITGSFDHTVTVWEADTGRKVY 255
Score = 86 (35.3 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ G +GS D +IWD + +C+ D EI S F G +++ KD+
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTD--EIFSCAFNYKGDIIITGSKDNT 410
Query: 310 VKLW 313
++W
Sbjct: 411 CRIW 414
Score = 74 (31.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/89 (25%), Positives = 43/89 (48%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
+ + L HI +T + + S +GS D+T K++D +S + H V ++
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWD--TASGEELHTLEGHRNVVYAIA 141
Query: 231 FH-PCGDYMVVGTDHFVLRLYSSD-GRIY 257
F+ P GD + G+ +L+S + G+ Y
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCY 170
Score = 41 (19.5 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVD 149
H++ A AF+ G ATGS D + K+ V+
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Score = 38 (18.4 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+H P A + G TGS D + K+ D
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 146 (56.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 53/200 (26%), Positives = 100/200 (50%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMES-SEPQNDQQGHPVIRTLYDHIEEVTC 184
AF+ DG+ A+ S D++IKI D+ + +++S S+ P + L + T
Sbjct: 841 AFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTI 900
Query: 185 LEFHPSAPILASGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYM--V 239
++P+ L + ++ VK +S + A + E V+ ++P G+ + +
Sbjct: 901 KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGS--EKNTVKL--WNPATGELLQTL 956
Query: 240 VGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298
G V + +S DG+ S S D IK+W+ + + TF K HD I ++ F+ +G
Sbjct: 957 EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTF-KGHD-LWIRAVAFSPDG 1014
Query: 299 KYLLSSGKDSLVKLWELSSA 318
K+L+S D+ +KLW+L+++
Sbjct: 1015 KHLVSGSDDNTIKLWDLATS 1034
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/211 (26%), Positives = 96/211 (45%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV 182
RA AFS DG+ +GS D +IK+ D LA S ++ S + + H V + D
Sbjct: 1006 RAVAFSPDGKHLVSGSDDNTIKLWD----LATSELQQSLEDHSRSVHAVAFSPDDKQLAS 1061
Query: 183 TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH--KTIQESTFVRCLS-FHPC-GDYM 238
+ L+ A+G +T++ SV + K + +++ + ++P G+
Sbjct: 1062 SSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 239 --VVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+ G +V + +S DG+ SG D IK+WD + + + T D I S+ F+
Sbjct: 1122 QTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSD--RIQSVVFS 1179
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+GK L S D KLW+ ++ L + G
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEG 1210
Score = 139 (54.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 64/262 (24%), Positives = 115/262 (43%)
Query: 80 LNPIQEILIGP-GLDLEFES-DVDPSAPEPAQYETAY-VTSHKSPCRAGAFSIDGQLCAT 136
L P++ ++ P G L S D +PA E + H + AFS DG+L A+
Sbjct: 750 LGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLAS 809
Query: 137 GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP--VIRTLY-DHIEEVTCLEFHPSAPI 193
GS D +I + D + E +GHP + + +E+ + I
Sbjct: 810 GSYDNTIDLWD---------SATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKI 860
Query: 194 --LASGSKDKTVKMFDYSKSSVRKAH--KTIQESTFVRCLS-FHPC-GDYM--VVGTDHF 245
LA+G +T+ S SV + K + S+ + ++P G+ + G +
Sbjct: 861 WDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
V + +S DG+ SGS+ +K+W+ + + + T + H + + S+ F+ +GK L SS
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL-EGHSQS-VRSVAFSPDGKQLASS 978
Query: 305 GKDSLVKLWELSSARCLIAYTG 326
D+ +KLW ++ + G
Sbjct: 979 SSDTTIKLWNSTTGELQQTFKG 1000
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/202 (25%), Positives = 93/202 (46%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES-SEPQNDQQGHPVIRTL 175
SH R+ AFS DG+L A+ S+D++IK+ + + S+E S P + L
Sbjct: 874 SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKL 933
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
E+ T ++P+ L + + + + S K + T ++ + G
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-STTG 992
Query: 236 DYMVV--GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292
+ G D ++ + +S DG+ SGS D IK+WD +S+ + H + + ++
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLED-HSRS-VHAV 1050
Query: 293 TFTRNGKYLLSSGKDSLVKLWE 314
F+ + K L SS DS +KLW+
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWD 1072
Score = 107 (42.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++S DG++ SGS D K+WD + + + F + H + S+ F+ +GK L SS
Sbjct: 1177 VFSPDGKLLASGSYDQTAKLWDPATGELLQIF-EGHS-KWVESVAFSPDGKLLASSSYGE 1234
Query: 309 LVKLWE 314
+KLW+
Sbjct: 1235 TIKLWD 1240
Score = 84 (34.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 159 SSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHK 218
S P+ +Q +TL +H+ V + F P L SGS D TVK++D + + +
Sbjct: 730 SQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQ--- 786
Query: 219 TIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252
T+ S V L+F P G + G+ + L+ S
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDS 821
Score = 62 (26.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 102 PSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
P + E + +H P + FS DG+ +GS D ++KI D
Sbjct: 733 PKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWD 778
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 155 (59.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 48/167 (28%), Positives = 78/167 (46%)
Query: 163 QNDQQGHPVIRT---LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT 219
Q+ + HP + T + C F P LAS S D ++++DY ++K +
Sbjct: 194 QDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQY 253
Query: 220 IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279
+ +F+ H D V+ D +S D + SGS+DG IKIW + C+
Sbjct: 254 QADESFM----MH---DDPVLCID------FSRDSEMLASGSQDGKIKIWRIRTGVCIRR 300
Query: 280 FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
F AH ++SL+F+R+G LLS+ D ++ L S + L + G
Sbjct: 301 FD-AHSQG-VTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRG 345
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD-RMLAKSSMESSEP----QNDQQGHPVI 172
H+ + FS++ + A+GS+D+ +KI + +M A + + Q GH V
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVA 78
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
D + CL + PS ++ K T + SS ++ T + ++ + H
Sbjct: 79 SGSRD---KTVCL-WVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH 134
Query: 233 PCGDYMVVGTDHFV-LRL--YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289
++ + H +R +S DGR+ S S D +K+WD S +C+ +F + H G
Sbjct: 135 R-QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCE-HGGFA- 191
Query: 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+ + F +G + ++G D VK+W++ R L Y
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHY 226
Score = 129 (50.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++A +S + + D+ I + +H +EFHPS +A+ DKTVK++D
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGRI 256
+ + + H + + V LSFHP G+Y++ ++ L++ +GR+
Sbjct: 219 MNRLLQ-HYQVHTAA-VNSLSFHPSGNYLITASNDSTLKILDLLEGRL 264
Score = 62 (26.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
E+ +H + R+ FS DGQ T S D +IK+ V R
Sbjct: 96 ESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 113 AY-VTSHKSPCRAGAFSIDGQLCATGSVDASI 143
AY + HK FS G L A+GS D ++
Sbjct: 55 AYCLVGHKDAVMCVQFSPSGHLVASGSRDKTV 86
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 148 (57.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H S + + +
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTC--VHDLQAHSKEIYTIKW 413
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G T + + + S S D +++WD C+ T +K + + S
Sbjct: 414 SPTGP----ATSN------PNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQE--PVYS 461
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 462 VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGI 500
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++S + + + C+
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR----HCIRE--- 231
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + +GS DG +IW +T + H G I +L +
Sbjct: 232 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLASTLGQ-HKGP-IFALKW 288
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 289 NKKGNYILSAGVDKTTIIWD 308
Score = 48 (22.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L ATGS D +I D LA + + P
Sbjct: 250 DGTLLATGSYDGFARIWTEDGNLASTLGQHKGP 282
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 124 (48.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR+ S S D I++WD SKC+ K H + + +++F+ + K L S G D
Sbjct: 76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVL-KGHQRS-VETVSFSPDSKQLASGGWDKR 133
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342
+WE+ S R + G Q + + T D+
Sbjct: 134 AIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS 166
Score = 82 (33.9 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS+ G + SGS D I +W ++ K H ++SL F+ + L S+G
Sbjct: 205 YSASG-LLASGSWDKTICVWKPTTNNLPLQL-KGHT-IWVNSLAFSPDELKLASAGYSRT 261
Query: 310 VKLWELSSARCLIAYTG 326
VK+W+ + +CL G
Sbjct: 262 VKVWDCLTGKCLETLKG 278
Score = 81 (33.6 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++A SS + S D + L H V + F P + LASG DK +++
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242
S R+ H + ++ F P D + G+
Sbjct: 141 --SGRRVHLLVGHCDSIQSSDFSPTSDSLATGS 171
Score = 75 (31.5 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 166 QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF 225
Q G V L H + + +F P++ LA+GS D TV ++D S+ ++ ++ T
Sbjct: 140 QSGRRV-HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 226 -VRCLSFHPCG 235
+ CL + G
Sbjct: 199 NISCLCYSASG 209
Score = 74 (31.1 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+ H+ P ++ FS DG+L A+ S D SI++ DV R
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVAR 99
Score = 67 (28.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
+S D S +K+WD ++ KC+ T D A + FT +GK L+S
Sbjct: 246 FSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAH--ACIFTPDGKLLVS 297
Score = 64 (27.6 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
F P ++AS S D +++++D ++S K Q S V +SF P + G
Sbjct: 76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRS--VETVSFSPDSKQLASG 128
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
H AFS DG+ T S D + +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYV 52
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 120 (47.3 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
R SGS D I+IW+ + +CV T + H GA I L + G ++S+ D LVK+W
Sbjct: 520 RQLASGSGDRTIRIWNVDTQQCVQTL-EGHTGA-ILKLIYISQGTQVVSAAADGLVKVWS 577
Query: 315 LSSARCL 321
LSS C+
Sbjct: 578 LSSGECV 584
Score = 105 (42.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
+L+L Y S G S + DG +K+W S +CVAT D + +L +G L+S
Sbjct: 552 ILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHED--RVWALASRFDGSLLVSG 609
Query: 305 GKDSLVKLWE 314
G D++V +W+
Sbjct: 610 GADAVVSVWK 619
Score = 83 (34.3 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTL 175
+H++P L ATG + +K+ D+ S +GH VI L
Sbjct: 101 AHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSF---------RGHGGVISAL 151
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
C H + +LASG+ D V+++D + S + S+ +R L+F P G
Sbjct: 152 --------CFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEG--HSSVIRGLTFEPTG 201
Query: 236 DYMVVGT 242
+++ G+
Sbjct: 202 SFLLSGS 208
Score = 71 (30.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK-SSVR 214
H + L F P+ L SGS+DKTV++++ K S+VR
Sbjct: 188 HSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVR 225
Score = 53 (23.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
I+++ H V + P+ +LA+G + VK++D + + V + + C
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGK 155
Query: 232 HPCGDYMVVGTDHFVLRLY 250
H + G D +RL+
Sbjct: 156 HQNTWVLASGADDSRVRLW 174
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+ +H A S DG++ A+ S D +IK+ D
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD 493
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ F +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S + L + G S E T T D
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVN--EATFTQD 360
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ F +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S + L + G S E T T D
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVN--EATFTQD 360
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ F +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S + L + G S E T T D
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVN--EATFTQD 360
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ F +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S + L + G S E T T D
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVN--EATFTQD 360
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V C F P L +GS D +++++++ +RK L + ++M++
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD------------LKYQAQDNFMMMD 264
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
D + +S D + +G++DG IK+W S +C+ F +AH ++ L+F+++ +
Sbjct: 265 -DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQI 322
Query: 302 LSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
LS+ D +++ L S + L + G S E T T D
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVN--EATFTQD 360
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 142 (55.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 47 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 106
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 107 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 164
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 165 WLASAADDHTVKLW 178
Score = 124 (48.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 121 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 178
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 179 DLTAGKMMSEFPG 191
Score = 114 (45.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
+RL + + + +GS+ G I++WD ++K + T H A I SL F G+++ S +
Sbjct: 73 VRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLM-GHK-ANICSLDFHPYGEFVASGSQ 129
Query: 307 DSLVKLWELSSARCLIAYTG 326
D+ +KLW++ C+ Y G
Sbjct: 130 DTNIKLWDIRRKGCVFRYRG 149
Score = 50 (22.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 97
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 99 DVDPSAPEPAQYETAYVTSHKSPCRAGAFS-IDGQLCATGSVDASIKILDVDR 150
D D A A + +H S + G+L ATG D + + +++
Sbjct: 4 DRDRCAQAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINK 56
>WB|WBGene00006386 [details] [associations]
symbol:taf-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0032940 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000910 GO:GO:0001703
EMBL:Z81073 GeneTree:ENSGT00700000104377 KO:K03130 OMA:CATISED
EMBL:Z83122 PIR:T21580 RefSeq:NP_492169.2 ProteinModelPortal:G5EF68
SMR:G5EF68 EnsemblMetazoa:F30F8.8.1 EnsemblMetazoa:F30F8.8.2
EnsemblMetazoa:F30F8.8.3 GeneID:172552 KEGG:cel:CELE_F30F8.8
CTD:172552 WormBase:F30F8.8 NextBio:876007 Uniprot:G5EF68
Length = 648
Score = 101 (40.6 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY-SKSSVR--KAHKTIQESTF 225
HP +R D +V C+++HP+ +A GS D+ V+++D S + VR HK
Sbjct: 468 HP-LRIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKAS----- 521
Query: 226 VRCLSFHPCGDYMV 239
+ + F PCG Y+V
Sbjct: 522 IIAVKFSPCGRYIV 535
Score = 70 (29.7 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR S G++ IWD + VA G + S+TF+R+G S +S
Sbjct: 527 FSPCGRYIVSLDAIGNLMIWDLAYQRLVAAEITEQAGTK-GSITFSRDGGVFAVSHGNSS 585
Query: 310 VKLWELSS 317
++L+ L +
Sbjct: 586 IQLYSLDT 593
Score = 70 (29.7 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 35 PMAITLQSSCNV---VEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQEILIGPG 91
P++I + ++ N V C +D S L+ +GL+ M M+P + ++++
Sbjct: 307 PVSICMYTTVNAPIGVASCDFTDD-SSLIAMGLSDSSIVMNAMDPMNKMKKLRDMEFLDK 365
Query: 92 LDLEFESDVDPSAPEPAQYETAYV--TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+D+E +V S Q T V T H P + FS D +L + + D ++++ ++
Sbjct: 366 IDIETADNVQ-SQMFDLQGSTTSVRYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSME 424
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 142 (55.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
+RL + + + +GS+ G I++WD ++K + T H A I SL F G+++ S +
Sbjct: 69 VRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLM-GHK-ANICSLDFHPYGEFVASGSQ 125
Query: 307 DSLVKLWELSSARCLIAYTG 326
D+ +KLW++ C+ Y G
Sbjct: 126 DTNIKLWDIRRKGCVFRYRG 145
Score = 50 (22.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 125 (49.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS A + F
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF--VAFN 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
NG + S+G D VK+W++ + L Y
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + + F+P+ +AS D TVK++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V C+SFHP G+Y++ + L++ +GR IY G +
Sbjct: 217 VNKLLQHYQV--HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Score = 105 (42.0 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 33/124 (26%), Positives = 64/124 (51%)
Query: 218 KTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275
KTI+ ++T +C++ D+ VG +FV ++ +G S D +KIWD +K
Sbjct: 166 KTIKIWDTTNKQCVNNF--SDF--VGFANFVA--FNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 276 CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335
+ + + H G ++ ++F +G YL+++ D +K+ +L R + YT G G F
Sbjct: 220 LLQHY-QVHSGG-VNCVSFHPSGNYLITASSDGTLKILDLLEGRLI--YTLQGHTGPVFT 275
Query: 336 LTLT 339
++ +
Sbjct: 276 VSFS 279
Score = 99 (39.9 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
+ LA +S + S + + +LY H V C +F P ++ S S+DKT+K++D +
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 210 -KSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFV 246
K V + + FV +F+P G + G+DH V
Sbjct: 175 NKQCVNNFSDFVGFANFV---AFNPNGTCIASAGSDHTV 210
Score = 83 (34.3 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D + + + T + H G + +++F++ G+ S G D+
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFTSGGADAQ 293
Query: 310 VKLW 313
V LW
Sbjct: 294 VLLW 297
Score = 81 (33.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V ++F LAS S+DK++K+++ + R + + + +VRC F P G
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ--RFLYSLYRHTHWVRCAKFSPDGRL 158
Query: 238 MVVGTDHFVLRLYSSDGR 255
+V ++ ++++ + +
Sbjct: 159 IVSCSEDKTIKIWDTTNK 176
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMF--DY-SKSSVRKAHKTIQESTFVRCLSFHPC 234
H + +T ++F P +LAS S+D+T++++ D KSS KAH + VR + F
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAH-----TAPVRSVDFSAD 113
Query: 235 GDYMVVGTDHFVLRLYS 251
G ++ ++ +++++
Sbjct: 114 GQFLASASEDKSIKVWN 130
Score = 71 (30.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQ A+ S D SIK+ ++ R
Sbjct: 100 AHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 133
Score = 54 (24.1 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 103 SAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
S+PE E Y HK+ + FS +G+ ATGS D + +
Sbjct: 3 SSPEDPVLER-YFKGHKAAITSVDFSPNGKQLATGSWDTFLML 44
Score = 44 (20.5 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
YV HK + FS G L A+ S D +I++ D+ KSS
Sbjct: 56 YV-GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKR-GKSS 96
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 48/151 (31%), Positives = 72/151 (47%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
+ TL H V C+ + P ++A+GS D T++++D KS S ++ LS+
Sbjct: 179 MHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWD-PKSGQCLGDALRGHSKWITSLSW 237
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P H V S R+ S SKDG IKIWD VS C T S H + +S
Sbjct: 238 EPI---------HLVKP--GSKPRL-ASSSKDGTIKIWDTVSRVCQYTMS-GHTNS-VSC 283
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSS-ARCL 321
+ + G L S D V++W+++S RC+
Sbjct: 284 VKWGGQG-LLYSGSHDRTVRVWDINSQGRCI 313
Score = 118 (46.6 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR S S D IK+WDG K ++TF + H A + + ++ + + L+S KD+
Sbjct: 410 FSPDGRYIVSASFDNSIKLWDGRDGKFISTF-RGHV-ASVYQVAWSSDCRLLVSCSKDTT 467
Query: 310 VKLWELSSARCLIAYTG 326
+K+W++ + + + G
Sbjct: 468 LKVWDVRTRKLSVDLPG 484
Score = 105 (42.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD R+ S SKD +K+WD V ++ ++ H E+ ++ ++ +GK + S GKD +
Sbjct: 452 WSSDCRLLVSCSKDTTLKVWD-VRTRKLSVDLPGHKD-EVYTVDWSVDGKRVCSGGKDKM 509
Query: 310 VKLW 313
V+LW
Sbjct: 510 VRLW 513
Score = 68 (29.0 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQ-QGHPVIRTLYDHIEEVTC 184
++S DG++ ATGS+D +I++ D +S + D +GH T E +
Sbjct: 193 SWSPDGEVIATGSMDNTIRLWDP---------KSGQCLGDALRGHSKWITSLSW-EPIHL 242
Query: 185 LEFHPSAPILASGSKDKTVKMFD 207
++ S P LAS SKD T+K++D
Sbjct: 243 VK-PGSKPRLASSSKDGTIKIWD 264
Score = 57 (25.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
A +T H+ AFS DG+ + S D SIK+ D
Sbjct: 396 ARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 122 (48.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD----GAEISSLTFT 295
G H+VL + +S DG+ SG K+G I +WD + K V H G L
Sbjct: 105 GHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHAN 164
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+Y+ SS KD V++W+ ++ RC TG
Sbjct: 165 PECRYMASSSKDGSVRVWDTTAGRCERILTG 195
Score = 114 (45.2 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S D RI S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 330 LFSPDSRIIASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 387
Query: 309 LVKLWELSSAR 319
+K+W++ + +
Sbjct: 388 TLKVWDVKAQK 398
Score = 104 (41.7 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD + K A D E+ ++ ++ +G+ + S GKD
Sbjct: 373 WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHAD--EVYAVDWSPDGQRVASGGKDKC 430
Query: 310 VKLW 313
+++W
Sbjct: 431 LRIW 434
Score = 69 (29.3 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D R L H + VTCL + +L S S+D+T+K++
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 223
Score = 59 (25.8 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + I+AS S DK++K++D
Sbjct: 309 PAEDKK--PLAR-MTGHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Score = 57 (25.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+P + A +T H++ FS D ++ A+ S D SIK+ D
Sbjct: 308 SPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Score = 50 (22.7 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 168 GHPVIRTLYDHIEEVTCLEFHP--SAP---ILASGSKDKTVKMFD 207
G V R L H + +T L + P + P +AS SKD +V+++D
Sbjct: 139 GKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWD 183
Score = 49 (22.3 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 58 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 94
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 121 (47.7 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 96 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 153
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+G + S+G D VK+W++ + L Y
Sbjct: 154 PSGTCIASAGSDQTVKVWDVRVNKLLQHY 182
Score = 116 (45.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+PS +AS D+TVK++D
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V C+SFHP G+Y++ + L++ +GR IY G +
Sbjct: 175 VNKLLQHYQV--HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV ++ G S D +K+WD +K + + + H G ++ ++F +G
Sbjct: 144 VGFANFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QVHSGG-VNCISFHPSGN 199
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339
YL+++ D +K+ +L R + YT G G F ++ +
Sbjct: 200 YLITASSDGTLKILDLLEGRLI--YTLQGHTGPVFTVSFS 237
Score = 97 (39.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 36/129 (27%), Positives = 56/129 (43%)
Query: 121 PCRAGAFS-IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179
P + G FS SVD S + LA +S + S + +LY H
Sbjct: 47 PDKRGKFSEFKAHTAPVRSVDFSAD----GQFLATASEDKSIKVWSMYRQRFLYSLYRHT 102
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLSFHPCGDYM 238
V C +F P ++ S S+DKT+K++D + K V ++ + FV F+P G +
Sbjct: 103 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCI 159
Query: 239 V-VGTDHFV 246
G+D V
Sbjct: 160 ASAGSDQTV 168
Score = 83 (34.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D + + + T + H G + +++F++ G+ S G D+
Sbjct: 194 FHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFASGGADTQ 251
Query: 310 VKLW 313
V LW
Sbjct: 252 VLLW 255
Score = 79 (32.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMF--DY-SKSSVRKAHKTIQESTFVRCLSFHPC 234
H + VT ++F P +LAS S+D+TV+++ D K S KAH + VR + F
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAH-----TAPVRSVDFSAD 71
Query: 235 GDYMVVGTDHFVLRLYS 251
G ++ ++ ++++S
Sbjct: 72 GQFLATASEDKSIKVWS 88
Score = 74 (31.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+H +P R+ FS DGQ AT S D SIK+ + R
Sbjct: 58 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 91
Score = 53 (23.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 68 PD-RMKRMEPSIGLNPIQEI-LIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
PD R K E P++ + G L S+ D S + Y ++ S H
Sbjct: 47 PDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE-DKSIKVWSMYRQRFLYSLYRHTHWV 105
Query: 123 RAGAFSIDGQLCATGSVDASIKILD 147
R FS DG+L + S D +IKI D
Sbjct: 106 RCAKFSPDGRLIVSCSEDKTIKIWD 130
Score = 43 (20.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
YV HK + FS G L A+ S D ++++ D+
Sbjct: 14 YV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK 49
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 150 (57.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 42/164 (25%), Positives = 75/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H S +
Sbjct: 334 QERP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTC--VHDLQAHSKEI 390
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT++ L + S S D +++WD C+ T +K +
Sbjct: 391 YTIKWSPTGP----GTNNPNANLMLAR-----SASFDSTVRLWDAERGACIHTLTKHQE- 440
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G++L S D V +W S + +Y G G +
Sbjct: 441 -PVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGGI 483
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ S+SS + + + C+
Sbjct: 161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLR----HCI--REG 214
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + D L ++S+G + +GS DG +IW +T + H G I +L +
Sbjct: 215 GQDVPSNKDVTSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKW 270
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G ++LS+G D +W+
Sbjct: 271 NKKGNFILSAGVDKTTIIWD 290
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
+G L ATGS D +I D LA + + P
Sbjct: 232 EGTLLATGSYDGFARIWTKDGNLASTLGQHKGP 264
>UNIPROTKB|Q9H6Y2 [details] [associations]
symbol:WDR55 "WD repeat-containing protein 55" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:AC116353 OMA:EDSMAQE CTD:54853
HOGENOM:HOG000242496 HOVERGEN:HBG054778 OrthoDB:EOG41C6WQ
InterPro:IPR017422 PIRSF:PIRSF038169 EMBL:AK000202 EMBL:AK025355
EMBL:BC068485 IPI:IPI00302990 IPI:IPI00929643 RefSeq:NP_060176.2
UniGene:Hs.286261 ProteinModelPortal:Q9H6Y2 SMR:Q9H6Y2
IntAct:Q9H6Y2 PhosphoSite:Q9H6Y2 DMDM:296453035 PaxDb:Q9H6Y2
PRIDE:Q9H6Y2 Ensembl:ENST00000358337 GeneID:54853 KEGG:hsa:54853
UCSC:uc003lgr.4 GeneCards:GC05P140044 HGNC:HGNC:25971
neXtProt:NX_Q9H6Y2 PharmGKB:PA142670590 InParanoid:Q9H6Y2
PhylomeDB:Q9H6Y2 ChiTaRS:WDR55 GenomeRNAi:54853 NextBio:57710
ArrayExpress:Q9H6Y2 Bgee:Q9H6Y2 CleanEx:HS_WDR55
Genevestigator:Q9H6Y2 GermOnline:ENSG00000120314 Uniprot:Q9H6Y2
Length = 383
Score = 108 (43.1 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 242 TDHFVLRLYSSDGRI------YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+D F LR S D + C+GS DG I+ + + ++ V + + H G + L +
Sbjct: 246 SDRFALRAESIDCMVPVTESLLCTGSTDGVIRAVNILPNRVVGSVGQ-HTGEPVEELALS 304
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLI 322
G++L SSG D +K W+++ R ++
Sbjct: 305 HCGRFLASSGHDQRLKFWDMAQLRAVV 331
Score = 83 (34.3 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 68 PDRMKRMEPSIGLN-PIQEILIGPGLDLEFESDVDPS----APEPAQYETAYVTS---HK 119
P R++ I L P + P DL DVD + + ET + S H
Sbjct: 25 PTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHL 84
Query: 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
CRA AFS DGQ T S D +I +LDV++
Sbjct: 85 KACRAVAFSEDGQKLITVSKDKAIHVLDVEQ 115
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 148 VDRMLAKSSME--SSEPQNDQQGHPV-IR-TLYDHIEEVTC--LEFHPSAPILASGSKDK 201
+DR + E S E D P IR T D + E L FHP+ +LA+G D
Sbjct: 1 MDRTCEERPAEDGSDEEDPDSMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDG 60
Query: 202 TVKMFDYS 209
V +F YS
Sbjct: 61 DVFVFSYS 68
Score = 50 (22.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 32/133 (24%), Positives = 46/133 (34%)
Query: 90 PGLDLEFESDVDPSAPEPAQY-ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
P D E D D S P + +T ++P AF L A G VD + +
Sbjct: 9 PAEDGSDEEDPD-SMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSY 67
Query: 149 DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208
S E + GH H++ + F L + SKDK + + D
Sbjct: 68 ------SCQEGETKELWSSGH--------HLKACRAVAFSEDGQKLITVSKDKAIHVLDV 113
Query: 209 SKSS----VRKAH 217
+ V KAH
Sbjct: 114 EQGQLERRVSKAH 126
Score = 39 (18.8 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210
DQ+ + + H E + + P+ +L + S D + +F+ +
Sbjct: 154 DQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGIFNIKR 199
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 59/229 (25%), Positives = 101/229 (44%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV 171
T ++ H + R I+ + ATGS+DA++K+ D+ R A+++ + D+ V
Sbjct: 360 TGFLEGHNASVRC--LQIEDNVVATGSMDATVKLWDLSR--ARTTHRDNRVNKDEDDDAV 415
Query: 172 ------------IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT 219
+ +L H+ EVT L F + L SGS DKT++ +D K +
Sbjct: 416 SVAYSTSLEDCHVYSLDAHVGEVTALHFKGNT--LVSGSADKTLRHWDLVKGRCVQTLDV 473
Query: 220 I----QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275
+ Q S+ + P G D FV + D + C G+ DG +++WD + S
Sbjct: 474 LWAAAQASSLGNESQWRPSGRLPDASAD-FVGAVQCFDAALAC-GTADGMVRLWD-LRSG 530
Query: 276 CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324
V H G +S L F + +L++ D +++W+L AY
Sbjct: 531 QVHRSLVGHTGP-VSCLQF--DDVHLVTGSLDRSIRIWDLRMGSIYDAY 576
>MGI|MGI:1915186 [details] [associations]
symbol:Wdr55 "WD repeat domain 55" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1915186 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 EMBL:CH466557
OMA:EDSMAQE CTD:54853 GeneTree:ENSGT00530000064256
HOGENOM:HOG000242496 HOVERGEN:HBG054778 OrthoDB:EOG41C6WQ
InterPro:IPR017422 PIRSF:PIRSF038169 EMBL:AK018469 EMBL:AK075958
EMBL:AK146093 EMBL:BC131932 EMBL:BC131934 IPI:IPI00187246
RefSeq:NP_080740.2 UniGene:Mm.271719 ProteinModelPortal:Q9CX97
SMR:Q9CX97 STRING:Q9CX97 PhosphoSite:Q9CX97 PaxDb:Q9CX97
PRIDE:Q9CX97 DNASU:67936 Ensembl:ENSMUST00000049323 GeneID:67936
KEGG:mmu:67936 UCSC:uc008eol.1 InParanoid:A2RS10 NextBio:326006
Bgee:Q9CX97 CleanEx:MM_WDR55 Genevestigator:Q9CX97
GermOnline:ENSMUSG00000042660 Uniprot:Q9CX97
Length = 388
Score = 109 (43.4 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 242 TDHFVLRLYSSD------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+D F LR S D + C+GS DG I+ + + ++ V T + H G + +L +
Sbjct: 247 SDRFALRAESIDCIVPVTENLLCTGSTDGIIRAVNILPNRVVGTVGQ-HAGEPVEALALS 305
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLI 322
G +L SSG D +K W+++ R ++
Sbjct: 306 HCGHFLASSGHDQRLKFWDMTQLRTVV 332
Score = 82 (33.9 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 68 PDRMKRMEPSIGL--NPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
P+ + P+ GL +P +++L +D DV A + ET + S H C
Sbjct: 33 PEDIVLEAPASGLAFHPTRDLLAAGDVD----GDVFVFAYSCQEGETKELWSSGHHLKSC 88
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVDR--MLAKSSMESSEPQN 164
RA FS DGQ T S D +I ILDV++ + + S S P N
Sbjct: 89 RAVVFSEDGQKLVTVSKDKAIHILDVEQGQLERRISKAHSAPIN 132
Score = 66 (28.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 153 AKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTC--LEFHPSAPILASGSKDKTVKMFDYS 209
A+ S E + + P IR T D + E L FHP+ +LA+G D V +F YS
Sbjct: 10 AEDSNNEEEDLDSTKAAPRIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYS 69
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/125 (23%), Positives = 45/125 (36%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS 156
E D+D + P +T ++P AF L A G VD + + A S
Sbjct: 17 EEDLDSTKAAPRIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVF------AYSC 70
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS---- 212
E + GH H++ + F L + SKDK + + D +
Sbjct: 71 QEGETKELWSSGH--------HLKSCRAVVFSEDGQKLVTVSKDKAIHILDVEQGQLERR 122
Query: 213 VRKAH 217
+ KAH
Sbjct: 123 ISKAH 127
Score = 39 (18.8 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210
DQ+ + + H E + + P+ +L + S D + +F+ +
Sbjct: 155 DQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKR 200
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT---R 296
G H+VL + +S DG+ SG K+G I +WD + K V H I++L++
Sbjct: 155 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHS-KWITALSWEPLHA 213
Query: 297 NG--KYLLSSGKDSLVKLWELSSARCLIAYTG 326
N +Y+ SS KD V++W+ ++ RC TG
Sbjct: 214 NPECRYVASSSKDGSVRVWDTTAGRCERTLTG 245
Score = 110 (43.8 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 21/71 (29%), Positives = 42/71 (59%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++S D R+ S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 380 VFSPDSRVIASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 437
Query: 309 LVKLWELSSAR 319
+K+W++ + +
Sbjct: 438 TLKVWDVKAQK 448
Score = 105 (42.0 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD V ++ ++T H E+ ++ ++ +G+ + S GKD
Sbjct: 423 WSADSRLLVSGSSDSTLKVWD-VKAQKLSTDLPGH-ADEVYAVDWSPDGQRVASGGKDKC 480
Query: 310 VKLW 313
+++W
Sbjct: 481 LRIW 484
Score = 74 (31.1 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D RTL H + VTCL + +L S S+D+T+K++
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVW 273
Score = 59 (25.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + ++AS S DK++K++D
Sbjct: 359 PAEDKK--PLAR-MTGHQALINQVVFSPDSRVIASASFDKSIKLWD 401
Score = 57 (25.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+P + A +T H++ FS D ++ A+ S D SIK+ D
Sbjct: 358 SPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD 401
Score = 49 (22.3 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 108 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 144
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 151 (58.2 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + S H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDH--FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
+ + P G GT++ L L S D S S D +++WD C+ T +K
Sbjct: 395 YTIKWSPTGP----GTNNPNANLMLASLD-----SASFDSTVRLWDVDRGICIHTLTKHQ 445
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ + S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 446 E--PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 489
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 55/249 (22%), Positives = 110/249 (44%)
Query: 71 MKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQY-ETAY---VTSHKSPCRAGA 126
++ +E + +N ++ + G +E S +D P+ Q + AY + ++ A A
Sbjct: 58 LQYVEAEVSIN--EDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAA 115
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTLYDHIEEVTCL 185
+ + Q A + + + +A + + E D + P L H EV
Sbjct: 116 AATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFIC 175
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
++P + +LASGS D T ++++ S++S + + + C+ G + D
Sbjct: 176 AWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLR----HCI--REGGQDVPSNKDVT 229
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
L ++S+G + +GS DG +IW +T + H G I +L + + G ++LS+G
Sbjct: 230 SLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKWNKKGNFILSAG 285
Query: 306 KDSLVKLWE 314
D +W+
Sbjct: 286 VDKTTIIWD 294
>RGD|1305640 [details] [associations]
symbol:Wdr55 "WD repeat domain 55" species:10116 "Rattus
norvegicus" [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006364 "rRNA
processing" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305640 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 EMBL:CH473974 CTD:54853
OrthoDB:EOG41C6WQ InterPro:IPR017422 PIRSF:PIRSF038169
EMBL:BC127460 IPI:IPI00421416 RefSeq:NP_001017932.1
UniGene:Rn.162302 ProteinModelPortal:A1L112 STRING:A1L112
PhosphoSite:A1L112 GeneID:307494 KEGG:rno:307494 UCSC:RGD:1305640
InParanoid:A1L112 NextBio:657490 ArrayExpress:A1L112
Genevestigator:A1L112 Uniprot:A1L112
Length = 384
Score = 108 (43.1 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 242 TDHFVLRLYSSD------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+D F LR S D + C+GS DG I+ + + ++ V T + H G + L +
Sbjct: 246 SDRFALRAESIDCMVPVTENLLCTGSTDGIIRAVNILPNRVVGTVGQ-HAGEPVEELALS 304
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLI 322
G +L SSG D +K W+++ R ++
Sbjct: 305 HCGHFLASSGHDQRLKFWDMTQLRTVV 331
Score = 81 (33.6 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 68 PDRMKRMEPSIGL--NPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
P+ + P+ GL +P +++L +D DV A + ET + S H C
Sbjct: 32 PEDIVLEAPASGLAFHPTRDLLAAGDVD----GDVFVFAYSCQEGETKELWSSGHHLKSC 87
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVDR--MLAKSSMESSEPQN 164
RA FS DGQ T S D +I +LDV++ + + S S P N
Sbjct: 88 RAVVFSEDGQKLVTVSKDKAIHVLDVEQGQLERRISKAHSAPIN 131
Score = 67 (28.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 31/132 (23%), Positives = 47/132 (35%)
Query: 90 PGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
P D E D+D + P +T ++P AF L A G VD + +
Sbjct: 9 PAEDSNNEEDLDSTKAAPRIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVF--- 65
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
A S E + GH H++ + F L + SKDK + + D
Sbjct: 66 ---AYSCQEGETKELWSSGH--------HLKSCRAVVFSEDGQKLVTVSKDKAIHVLDVE 114
Query: 210 KSS----VRKAH 217
+ + KAH
Sbjct: 115 QGQLERRISKAH 126
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 148 VDRMLAKSSMESSEPQND---QQGHPVIR-TLYDHIEEVTC--LEFHPSAPILASGSKDK 201
+D +S E S + D + P IR T D + E L FHP+ +LA+G D
Sbjct: 1 MDPTCQESPAEDSNNEEDLDSTKAAPRIRDTPEDIVLEAPASGLAFHPTRDLLAAGDVDG 60
Query: 202 TVKMFDYS 209
V +F YS
Sbjct: 61 DVFVFAYS 68
Score = 39 (18.8 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210
DQ+ + + H E + + P+ +L + S D + +F+ +
Sbjct: 154 DQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKR 199
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 44/186 (23%), Positives = 89/186 (47%)
Query: 141 ASIKIL-DVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199
+S+ I+ + D +++ S ++ + G+ ++T H E V + + +LAS S
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATGY-CVKTFTGHREWVRMVRPNQDGTLLASCSN 254
Query: 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV----GTDHFVLRLYSSDGR 255
D+TV+++ + KA E V C+S+ P + + G+++ + G
Sbjct: 255 DQTVRVWVVATKEC-KAELREHEHV-VECISWAPESAHPTISEATGSEN---KKSGKPGP 309
Query: 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
SGS+D IK+WD + C+ T HD + + F G++++S D +++W+
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLV-GHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 316 SSARCL 321
+ RC+
Sbjct: 368 KNKRCM 373
Score = 133 (51.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
T SV I ++LA S + + D QG IRT++ H V+ + P+ +
Sbjct: 150 TDSVQ-DISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG- 254
S S+DKT+KM++ + K +E +VR + P D GT +L S+D
Sbjct: 209 SASRDKTMKMWEVATGYCVKTFTGHRE--WVRMV--RPNQD----GT---LLASCSNDQT 257
Query: 255 -RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE--ISSLTFTRN------GKYLLSSG 305
R++ +K+ ++ + V S A + A IS T + N G +LLS
Sbjct: 258 VRVWVVATKECKAELRE--HEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGS 315
Query: 306 KDSLVKLWELSSARCLIAYTG 326
+D +K+W++S+ CL+ G
Sbjct: 316 RDKTIKMWDISTGMCLMTLVG 336
Score = 120 (47.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 175 LYDHIEEVTCLEFHPSA--PIL--ASGSKDK-TVKMFDYSKSSVR-KAHKTIQESTFVRC 228
L +H V C+ + P + P + A+GS++K + K + S R K K ST + C
Sbjct: 272 LREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGM-C 330
Query: 229 LSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
L +VG D++V L+ GR S + D ++IWD + +C+ T S AH+
Sbjct: 331 LM-------TLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLS-AHEHF 382
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 383 -VTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 53 (23.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
DP P E ++ H+SP F L + S DA+IK+ D +
Sbjct: 90 DPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYE 138
Score = 48 (22.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAP----EPAQYETAYVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P L + D + E +E + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT-LKGHTDSVQDISFDQTGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 137 (53.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 47/211 (22%), Positives = 90/211 (42%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDR-----MLAKSSMESSEPQNDQQGHPVIRTLYDHIE 180
+F+ + ATGS+D + K+ D+ L E D G +I +DH
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTV 243
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH--KT--IQESTFVRCLSFHPCGD 236
V L + + +F + S + KT + ++T +C++
Sbjct: 244 VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA------ 297
Query: 237 YMVVGTDHFVL-RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+ G D +L + G++ + S DG ++++ + KC+ T + H+G EIS ++F
Sbjct: 298 -TLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCI-TKLEGHEG-EISKISFN 354
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
G LL+ D ++W++ + +CL G
Sbjct: 355 PQGNRLLTGSSDKTARIWDVQTGQCLQVLEG 385
Score = 110 (43.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
T H E+ CL F+P + ++A+GS D T K++D +S T + + LSF
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI-QSGEEVVTLTGHLAEIIS-LSFDT 229
Query: 234 CGDYMVVGT-DHFVLRLYSSDGR 255
GD ++ G+ DH V+ +S GR
Sbjct: 230 SGDRIITGSFDHTVVVWDASTGR 252
Score = 92 (37.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
T V ++ + +GS D K+WD S + V T + H AEI SL+F +G +
Sbjct: 177 TAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT-GHL-AEIISLSFDTSGDRI 234
Query: 302 LSSGKDSLVKLWELSSAR 319
++ D V +W+ S+ R
Sbjct: 235 ITGSFDHTVVVWDASTGR 252
Score = 82 (33.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ G +GS D +IWD + +C+ D EI S F G +++ KD+
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTD--EIFSCAFNYKGNIVITGSKDNS 410
Query: 310 VKLW 313
++W
Sbjct: 411 CRIW 414
Score = 77 (32.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 26/110 (23%), Positives = 51/110 (46%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R+L + E D + + + L HI +T + + + +GS D+T K++D
Sbjct: 64 RLLVQRLQEKLRQHCDHNFY-LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWD-- 120
Query: 210 KSSVRKAHKTIQESTFVRCLSFH-PCGDYMVVGTDHFVLRLYSSD-GRIY 257
+S + H V ++F+ P GD + G+ +L+S++ G+ Y
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCY 170
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+H P A + G TGS D + K+ D
Sbjct: 90 AHILPLTNVALNKAGSCFITGSYDRTCKVWD 120
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 123 (48.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCV----ATFSKAHDGAEISSLTFT 295
G H+VL + +S DGR SG K+G I +WD + K V A SK G L
Sbjct: 154 GHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+Y+ SS KD V++W+ ++ RC TG
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTG 244
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S D RI S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 379 LFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 436
Query: 309 LVKLWELSSARCLIAYTG 326
+K+W++ + + + G
Sbjct: 437 TLKVWDVKAQKLAMDLPG 454
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD V ++ +A H E+ ++ ++ +G+ + S GKD
Sbjct: 422 WSADSRLLVSGSSDSTLKVWD-VKAQKLAMDLPGH-ADEVYAVDWSPDGQRVASGGKDKC 479
Query: 310 VKLW 313
+++W
Sbjct: 480 LRIW 483
Score = 77 (32.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFH 232
+L H E V + F P+ LASGS D TV+ +D S + H T + +V +S+
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTET---PHFTCKGHRHWVLSISWS 165
Query: 233 PCGDYMVVGTDHFVLRLYS-SDGR 255
P G + G + + L+ S G+
Sbjct: 166 PDGRKLASGCKNGQILLWDPSTGK 189
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D R L H + VTCL + +L S S+D+T+K++
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + I+AS S DK++K++D
Sbjct: 358 PAEDKK--PLTR-MTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Score = 54 (24.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 168 GHPVIRTLYDHIEEVTCLEFHP--SAP---ILASGSKDKTVKMFD 207
G V RTL H + +T L + P + P +AS SKD +V+++D
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWD 232
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWD---GVS-SKCVATFSKAHDGAEISSLTFT 295
G H+VL + +S DG+ SG K+G + +WD G+ + + SK G L
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+Y+ SS KD V++W+ ++ RC TG
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTG 244
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S D RI S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 379 LFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 436
Query: 309 LVKLWELSSAR 319
+K+W++ + +
Sbjct: 437 TLKVWDVKAQK 447
Score = 108 (43.1 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD V ++ +AT H E+ ++ ++ +G+ + S GKD
Sbjct: 422 WSADSRLLVSGSSDSTLKVWD-VKAQKLATDLPGH-ADEVYAVDWSPDGQRVASGGKDKC 479
Query: 310 VKLW 313
+++W
Sbjct: 480 LRIW 483
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D R L H + VTCL + +L S S+D+T+K++
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Score = 58 (25.5 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + I+AS S DK++K++D
Sbjct: 358 PAEDKK--PLAR-MTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+P + A +T H++ FS D ++ A+ S D SIK+ D
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Score = 52 (23.4 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 168 GHPVIRTLYDHIEEVTCLEF---H--PSAPILASGSKDKTVKMFD 207
G V RTL H + +T L + H P +AS SKD +V+++D
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 232
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S D RI S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 379 LFSPDSRIIASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 436
Query: 309 LVKLWELSSAR 319
+K+W++ + +
Sbjct: 437 TLKVWDVKAQK 447
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT---R 296
G H+VL + +S DG+ SG K+G I +WD + K V H I++L++
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHS-KWITALSWEPLHA 212
Query: 297 NG--KYLLSSGKDSLVKLWELSSARCLIAYTG 326
N +Y+ SS KD V++W+ ++ RC TG
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILTG 244
Score = 104 (41.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD + K A D E+ ++ ++ +G+ + S GKD
Sbjct: 422 WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHAD--EVYAVDWSPDGQRVASGGKDKC 479
Query: 310 VKLW 313
+++W
Sbjct: 480 LRIW 483
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D R L H + VTCL + +L S S+D+T+K++
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Score = 59 (25.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + I+AS S DK++K++D
Sbjct: 358 PAEDKK--PLAR-MTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Score = 57 (25.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+P + A +T H++ FS D ++ A+ S D SIK+ D
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Score = 52 (23.4 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 168 GHPVIRTLYDHIEEVTCLEFHP--SAP---ILASGSKDKTVKMFD 207
G V R L H + +T L + P + P +AS SKD +V+++D
Sbjct: 188 GKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD 232
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWD---GVS-SKCVATFSKAHDGAEISSLTFT 295
G H+VL + +S DG+ SG K+G I +WD G + + SK G L
Sbjct: 156 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMN 215
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+Y+ SS KD V++W+ ++ RC TG
Sbjct: 216 PECRYVASSSKDGSVRVWDTTAGRCERILTG 246
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S D RI S S D IK+WDG + K +A+ + H A + + ++ + + L+S DS
Sbjct: 381 LFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAA-VYQIAWSADSRLLVSGSSDS 438
Query: 309 LVKLWELSSAR 319
+K+W++ + +
Sbjct: 439 TLKVWDVKAQK 449
Score = 104 (41.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+WD V ++ + T H E+ ++ ++ +G+ + S GKD
Sbjct: 424 WSADSRLLVSGSSDSTLKVWD-VKAQKLTTDLPGH-ADEVYAVDWSPDGQRVASGGKDKC 481
Query: 310 VKLW 313
+++W
Sbjct: 482 LRIW 485
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
R +A SS + S D R L H + VTCL + +L S S+D+T+K++
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 274
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P D++ P+ R + H + + F P + I+AS S DK++K++D
Sbjct: 360 PAEDKK--PLAR-MTGHQALINQVLFSPDSRIVASASFDKSIKLWD 402
Score = 57 (25.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
+P + A +T H++ FS D ++ A+ S D SIK+ D
Sbjct: 359 SPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 402
Score = 53 (23.7 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 168 GHPVIRTLYDHIEEVTCLEF---H--PSAPILASGSKDKTVKMFD 207
G V RTL H + +T L + H P +AS SKD +V+++D
Sbjct: 190 GTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 234
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
T+ + H + AFS G+ A+GS D +++ D+
Sbjct: 109 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 145
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 123 (48.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/158 (27%), Positives = 71/158 (44%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
++ T H V L F+ +L + S D+++K++D S+ K +S
Sbjct: 88 LLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKT------------IS 135
Query: 231 FHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-----KAHD 285
H VV D + +D I SGS DG I+I+D + C+ T + K +
Sbjct: 136 AH---SEAVVSVD-----VPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKREN 187
Query: 286 GA-EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322
G IS + F+ N +YLL D +VK+W+ C++
Sbjct: 188 GVVPISQVKFSENARYLLVKSLDGVVKIWDCIGG-CVV 224
Score = 99 (39.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DS 308
++ G + + S D IKIWD ++ + T S AH A +S + N +LSSG D
Sbjct: 104 FNRKGNLLFTSSMDESIKIWDTLNGSLMKTIS-AHSEAVVS-VDVPMNDSSILSSGSYDG 161
Query: 309 LVKLWELSSARCLIAYT 325
L+++++ + CL T
Sbjct: 162 LIRIFDAETGHCLKTLT 178
Score = 64 (27.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
VTSH P +S DGQ AT S D S++I+ + L + + + P
Sbjct: 51 VTSHARPFSELCWSPDGQCIATASDDFSVEIIHLSYGLLHTFIGHTAP 98
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 95 (38.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ SGS D +K+++ + +K + H G E+ ++ ++ G ++S GKD +
Sbjct: 410 WSADSRLLVSGSADSTLKVFE-LKTKSLYYDLPGH-GDEVFTVDWSPEGTKVVSGGKDKV 467
Query: 310 VKLW 313
+KLW
Sbjct: 468 LKLW 471
Score = 89 (36.4 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++S D R S S D +K+W G + K +A+ + H G + + ++ + + L+S DS
Sbjct: 367 VFSPDTRYIASASFDKSVKLWCGRTGKYLASL-RGHVGP-VYQVAWSADSRLLVSGSADS 424
Query: 309 LVKLWELSSARCLIAYTGAG 328
+K++EL + G G
Sbjct: 425 TLKVFELKTKSLYYDLPGHG 444
Score = 74 (31.1 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
QG V+R L H VTCL + ++ SGS+D+TVKM+
Sbjct: 226 QG-TVVRCLSGHTASVTCLRWGGEG-LIYSGSQDRTVKMW 263
Score = 73 (30.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 161 EPQNDQQGHPVIR---TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH 217
+PQ + PV R ++ H E V +F P LASGS D+T++++D H
Sbjct: 84 QPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELEL--PLH 141
Query: 218 KTIQESTFVRCLSFHP 233
++V C+++ P
Sbjct: 142 TCKSHKSWVLCIAWSP 157
Score = 71 (30.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 24/116 (20%), Positives = 49/116 (42%)
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
RC+ + V + L + G SGS D + +W+ +K H
Sbjct: 302 RCIKPDTVEECQKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQ 361
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342
++ + F+ + +Y+ S+ D VKLW + + L + G +G +++ + D+
Sbjct: 362 L-VNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRG--HVGPVYQVAWSADS 414
Score = 65 (27.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191
Q A +A+++I +R+++ S + N ++ I + H++ V + F P
Sbjct: 313 QKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDT 372
Query: 192 PILASGSKDKTVKMF 206
+AS S DK+VK++
Sbjct: 373 RYIASASFDKSVKLW 387
Score = 64 (27.6 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES 159
+A + H P + FS DG+ A+GS D +++I D++ L + +S
Sbjct: 98 SASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKS 145
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCL 229
+I TL DH ++V+C F S+ +LA+ S DKT++++ S + H ++ T+ V C
Sbjct: 4 LIHTLADHGDDVSCCAF--SSTLLATCSLDKTIRLYSLSDFA-ELPHSPLKFHTYAVHCC 60
Query: 230 SFHPCGDYMV-VGTD 243
SF P G + TD
Sbjct: 61 SFSPSGHVLASCSTD 75
Score = 98 (39.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
+MLA S++ S D V+ TL H VT F P+ +LA+GS DKTV ++ +
Sbjct: 252 QMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFD 311
Query: 210 KSSVRKAHKTIQE-STFVRCLSFHPCGDYM-VVGTDHFV--LRLYSSDGRIYCSGSKD-- 263
+ +A + F+ S ++ G + V R + DG+ +K+
Sbjct: 312 LETPCQAGSVSDQLKHFIEDWSEEDVSKWLRAQGLEDLVDIFRTNNIDGKELLHLTKESL 371
Query: 264 -GDIKIWD-GVSSKCVATFSKAHDGAE-ISS 291
GD+KI G+ SK + + + E +SS
Sbjct: 372 AGDMKIESLGLRSKVLRSIDELRTRMESLSS 402
Score = 94 (38.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 234 CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD-G---AEI 289
CG V V +S DG + +GS GD+ +WD +C+ + KAHD G
Sbjct: 134 CGS---VKDSSLVACAFSPDGGLLVTGSSGGDLTVWDD-RMRCLHS-EKAHDLGITCCSF 188
Query: 290 SS--LTFTRNGK--YLLSS-GKDSLVKLWELSSARCL 321
SS L+ +G Y L+S G+D +KLW +S R L
Sbjct: 189 SSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVL 225
Score = 82 (33.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
++ H +P A AFS DGQ+ A+GSVD S+ I D+
Sbjct: 235 LSGHCAPVLACAFSHDGQMLASGSVDKSVIIYDI 268
Score = 69 (29.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/86 (25%), Positives = 39/86 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG++ SGS D + I+D + + T ++ H +++ F N L + D
Sbjct: 247 FSHDGQMLASGSVDKSVIIYDIGTQSVLHTLTQ-HT-RYVTTCAFAPNTLLLATGSMDKT 304
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFE 335
V +W+ L AGS+ Q +
Sbjct: 305 VNIWQFD----LETPCQAGSVSDQLK 326
Score = 66 (28.3 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S D SG+ DG + +W+ S K S D + ++ F+ +G L++
Sbjct: 105 FSPDSTYLASGAADGSVVLWNAHSYKLYRCGS-VKDSSLVAC-AFSPDGGLLVTGSSGGD 162
Query: 310 VKLWELSSARCL 321
+ +W+ RCL
Sbjct: 163 LTVWD-DRMRCL 173
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 130 (50.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 23/68 (33%), Positives = 44/68 (64%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D ++++WD C+ T+ K H IS++ F+ +G++++S G D++VK+W
Sbjct: 112 GEFLASGSSDTNLRVWDTRKKGCIQTY-KGHTRG-ISTIEFSPDGRWVVSGGLDNVVKVW 169
Query: 314 ELSSARCL 321
+L++ + L
Sbjct: 170 DLTAGKLL 177
Score = 121 (47.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H + L+FHP +LA+GS D+TVK +D + T E+T VR ++FHP G
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL--IGTTRPEATGVRAIAFHPDGQT 240
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277
+ G D L++YS + + C +DG W + C+
Sbjct: 241 LFCGLDDG-LKVYSWEP-VIC---RDGVDMGWSTLGDFCI 275
Score = 108 (43.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DS 308
+S DGR SG D +K+WD + K + F K H+G I SL F ++LL++G D
Sbjct: 150 FSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF-KCHEGP-IRSLDF-HPLEFLLATGSADR 206
Query: 309 LVKLWELSSARCLIAYTGAGSMG 331
VK W+L + LI T + G
Sbjct: 207 TVKFWDLETFE-LIGTTRPEATG 228
Score = 92 (37.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D + ++R H + +EFHP LASGS D ++++D K + +K +
Sbjct: 86 DLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKG--HTR 143
Query: 225 FVRCLSFHPCGDYMVVG 241
+ + F P G ++V G
Sbjct: 144 GISTIEFSPDGRWVVSG 160
Score = 62 (26.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
T H+S C A F G+ A+GS D ++++ D
Sbjct: 97 TGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
H SP + AF+ + L G+ IK+ D++
Sbjct: 57 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLE 88
Score = 43 (20.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 127 FSIDGQLCATGSVDASIKILDV 148
FS DG+ +G +D +K+ D+
Sbjct: 150 FSPDGRWVVSGGLDNVVKVWDL 171
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 132 (51.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ DG I+ +G+ D IKIWD VA F H G I+S+ F+ NG YL ++ DS
Sbjct: 359 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFP-GHSGP-ITSIAFSENGYYLATAADDSS 416
Query: 310 VKLWEL 315
VKLW+L
Sbjct: 417 VKLWDL 422
Score = 60 (26.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 179 IEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
I + L+ PS + +G DK V +FD S + K S V + FHP D
Sbjct: 222 IPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKG--HSKKVTSVVFHPSQDL 279
Query: 238 MVVGTDHFVLRLYS 251
+ + +R++S
Sbjct: 280 VFSASPDATIRIWS 293
Score = 59 (25.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST--FVRCL 229
++ + H VT L H + L S S D+ D V K ES+ + C
Sbjct: 300 VQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLT--KVTDESSGCALTCA 357
Query: 230 SFHPCGDYMVVGT 242
FHP G ++ GT
Sbjct: 358 QFHPDG--LIFGT 368
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 153 (58.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 43/162 (26%), Positives = 71/162 (43%)
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
HPV +T H EV +++ PS +LAS S D T+K++ + + H S +
Sbjct: 350 HPV-KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHDLQAHSKEIYT 406
Query: 229 LSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE 288
+ + P G T + + + S S D +++WD C T K +
Sbjct: 407 IKWSPTGP----ATSN------PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQE--P 454
Query: 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 455 VYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGI 496
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++S + + + C+
Sbjct: 175 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR----HCIRE--- 227
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + GS DG +IW + +T + H G I +L +
Sbjct: 228 GGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE-NGNLASTLGQ-HKGP-IFALKW 284
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 285 NKKGNYVLSAGVDKTTIIWD 304
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L A GS D +I + LA + + P
Sbjct: 246 DGTLLAMGSYDGFARIWTENGNLASTLGQHKGP 278
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H S + + +
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHDLQAHSKEIYTIKW 409
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G T + + + S S D +++WD C T +K + + S
Sbjct: 410 SPTGP----ATSN------PNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQE--PVYS 457
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 458 IAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGI 496
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
+ SA A T S ++P + +++G+ ++ K +++DR +
Sbjct: 114 EASAMAKAATMTPAAISQQNPPKIREATVNGEENGAHEINNHSKPMEIDR-------DVE 166
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
P N V+R H EV ++P + +LASGS D T ++++ +++S + + +
Sbjct: 167 IPPNKAT---VLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLV 220
Query: 221 QESTFVRCLSFHPCGDYMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279
+R +H V ++ V L ++SDG + GS DG +IW + +T
Sbjct: 221 LRHC-IR-EGWHD------VPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE-NGNLAST 271
Query: 280 FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
+ H G I +L + + G Y+LS+G D +W+
Sbjct: 272 LGQ-HKGP-IFALKWNKKGNYILSAGVDKTTIIWD 304
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
Y+ G + SGSKD DI +WD V + D +++ L F GK L+SS KD
Sbjct: 114 YNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRD--QVTDLVFLDGGKKLVSSSKDKF 171
Query: 310 VKLWELSSARCLIAYTG 326
+++W+L + C+ +G
Sbjct: 172 LRVWDLETQHCMQIVSG 188
Score = 124 (48.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
SSDG + +GS+D ++KIW C + AH G + + F RN YL S GKD LV
Sbjct: 591 SSDGELIVTGSQDKNLKIWGLDFGDCHKSIF-AH-GDSVMGVKFVRNTHYLFSIGKDRLV 648
Query: 311 KLWELSSARCLIAYTG 326
K W+ L+ G
Sbjct: 649 KYWDADKFEHLLTLEG 664
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 137 GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196
G+V A ++ V MLA S ++ D G + L H ++VT L F L S
Sbjct: 107 GAVTA-LRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVS 165
Query: 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DH----FVLRLYS 251
SKDK ++++D + + V + P Y+V G+ D + ++ YS
Sbjct: 166 SSKDKFLRVWDLETQHCMQI--VSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYS 223
Query: 252 SDGRIYCSGSKDGDIK 267
S+G + S S +IK
Sbjct: 224 SNGSLV-SDSNANEIK 238
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
H VT L ++ +LASGSKD + ++D
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWD 134
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV 182
RAG C T + S+ L + L +S+E ++ + V H +V
Sbjct: 353 RAGRKISSFSFCPTAPKE-SLGTLALS--LNNNSLEFYSLKSSENAKTVTIEHQGHRSDV 409
Query: 183 TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242
+ +L S S + VK+++ S S + TI +S + C P Y +VGT
Sbjct: 410 RSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLR---TI-DSGYGLCSLIVPQNKYGIVGT 464
Query: 243 DHFVLRL 249
VL +
Sbjct: 465 KSGVLEI 471
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
SHK A ++ G + A+GS D I + DV
Sbjct: 104 SHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/105 (21%), Positives = 41/105 (39%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQND---QQGHPV 171
V+ H S + + + TGS D ++ V + S+ S N+ + H
Sbjct: 186 VSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSNANEIKASEEHST 245
Query: 172 -----IRTLYDHIEE-----VTCLEFHPSAPILASGSKDKTVKMF 206
I L+ I+ V + F+ S +LA KT+++F
Sbjct: 246 ENKWEILKLFGEIQRQTKDRVARVRFNVSGKLLACQMAGKTIEIF 290
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 87 (35.7 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
+GS DG ++ +D + + G+ I+ + F+R+G+ LSS DS V+L + S+
Sbjct: 168 TGSVDGRVRRYDLRMGQLQVDYI----GSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTG 223
Query: 319 RCLIAYTGAGSMGQQFELTLTVDAD 343
L Y+G + G + + LT D D
Sbjct: 224 EMLGEYSGHVNKGYKLDCCLT-DKD 247
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 144 KILDVDRMLAKSSMESSEPQN-----DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198
++LD D S + S D V R L H +V C++F+ A ++ SGS
Sbjct: 69 EVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGS 128
Query: 199 KDKTVKMFDYSKSSVRKAHKTIQES 223
D TV+ +D ++S + + + ES
Sbjct: 129 IDGTVRCWD-TRSRRMEPIQILDES 152
Score = 61 (26.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 102 PSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
P AP+ Q+ V + RA F+ DG T D S+K+ V R
Sbjct: 8 PQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSR 56
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDS 308
+S DG+ S S D +++ D + + + +S + G ++ T ++LS +D
Sbjct: 199 FSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCC-LTDKDTHVLSCSEDG 257
Query: 309 LVKLWEL 315
V W+L
Sbjct: 258 HVYYWDL 264
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 126 (49.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 207 DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG--TDH----FVLRLYSSDGRIYCSG 260
D + +V K I + R C D ++G T H + ++ +S +I +
Sbjct: 492 DINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQ-FSPVDQILATS 550
Query: 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320
S DG +K+W C+ TF + HD A + + F G LLS G D L+KLW + + C
Sbjct: 551 SADGTLKLWGLQDFSCLKTF-EGHD-ASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNEC 608
Query: 321 LIAYTG 326
+ G
Sbjct: 609 VKTLDG 614
Score = 122 (48.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
S S D I+IWD SSKCVA H A ++SL FT +G L+SSG+D + +W L +
Sbjct: 171 SSSMDYKIRIWDLNSSKCVAVLD-GHFSA-VTSLAFTADGNTLISSGRDKICMVWNLKT 227
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
HI V + F ++ +LA+G D T+K++D K H S V + FHP
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYC--THNLKGSSGVVHLVEFHP 162
Score = 58 (25.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME-SSEPQNDQQGHPVIRTL 175
H +P F L ATG D++IKI D+ + +++ SS + + HP I L
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRL 167
Score = 52 (23.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210
LY H E + L+ + S +KDK+++++ +K
Sbjct: 382 LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNK 417
Score = 50 (22.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 15/88 (17%), Positives = 38/88 (43%)
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
D E++T P +L +GS+ +K +++ ++ + K + + V + F
Sbjct: 65 DDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAP-VATMVFDSTST 123
Query: 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDG 264
+ G ++++ + YC+ + G
Sbjct: 124 LLATGGCDSTIKIWDMIKQ-YCTHNLKG 150
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 301 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 355
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 356 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 413
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 414 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 471
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 472 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 499
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 231 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 290
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 291 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 345
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 346 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 405
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 406 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 462 SLTSGMEL 469
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 343 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 397
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 398 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 455
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 456 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 513
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 514 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 541
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 273 WKSAYIRQHRIDTNWRRGELRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 332
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 333 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 387
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 388 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 447
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 448 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 504 SLTSGMEL 511
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246
F P A L SGSKD +++++Y +RK L + + M++ D V
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKLRKD------------LKYQAQDNLMMM--DAAV 267
Query: 247 LRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
+ +S D + +GS DG IK+W + C+ F +AH + ++ F+++ ++LS G
Sbjct: 268 RCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKG-VCAVRFSKDNSHILSGG 326
Query: 306 KDSLVKLWELSSARCLIAYTGAGS 329
D +V++ + S +CL G S
Sbjct: 327 NDHVVRVHGMKSGKCLKEMRGHSS 350
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 341 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 395
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 396 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 453
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 454 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 511
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 512 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 539
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 271 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 330
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 331 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 385
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 386 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 445
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 446 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 502 SLTSGMEL 509
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 343 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 397
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 398 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 455
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 456 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 513
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 514 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 541
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 273 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 332
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 333 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 387
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 388 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 447
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 448 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 504 SLTSGMEL 511
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 145 (56.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT++ L + S S D +++WD C+ T +K +
Sbjct: 395 YTIKWSPTGP----GTNNPNANL------MLASASFDSTVRLWDVDRGICIHTLTKHQE- 443
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 444 -PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/140 (26%), Positives = 68/140 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ S++S + + + C+
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLR----HCI--REG 218
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + D L ++S+G + +GS DG +IW +T + H G I +L +
Sbjct: 219 GQDVPSNKDVTSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKW 274
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G ++LS+G D +W+
Sbjct: 275 NKKGNFILSAGVDKTTIIWD 294
Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
+G L ATGS D +I D LA + + P
Sbjct: 236 EGTLLATGSYDGFARIWTKDGNLASTLGQHKGP 268
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 105 (42.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 241 GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300
G+D F +S DG +GS DG + +W+ ++ K T K H A I+S++++ +G +
Sbjct: 532 GSD-FTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSA-INSVSWSLSGAF 589
Query: 301 LLSSGKDSLVKLW 313
+ S K S LW
Sbjct: 590 VASVEKGSKAVLW 602
Score = 89 (36.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 175 LYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
++D H EV + F P + +LA+G D+ VK+++ + + + F
Sbjct: 312 IFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDS 371
Query: 234 CGDYMVVGTDHFVLRLYSSD 253
G Y++ ++ F R+++ D
Sbjct: 372 AGSYLLAASNDFASRIWTVD 391
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
+H A FS +L ATG +D +K+ +V
Sbjct: 315 AHDGEVNAVRFSPGSRLLATGGMDRRVKLWEV 346
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
TL H +V F + SGS D+T+K++D
Sbjct: 398 TLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWD 431
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 421 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 475
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 476 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 533
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 534 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 591
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 592 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 619
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 351 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 410
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 411 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 465
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 466 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 525
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 526 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 582 SLTSGMEL 589
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V +S ++ D + +++ S+ + + N + G I TLY H V C+ H +
Sbjct: 426 TGGVWSS-QMRD-NIIISGSTDRTLKVWNAETGE-CIHTLYGHTSTVRCMHLHEKRVV-- 480
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----CG--DYMVVGTD------ 243
SGS+D T++++D H + VRC+ + G D+MV D
Sbjct: 481 SGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 538
Query: 244 -HFVL----RLYSS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
H + R+YS DG SGS D I++WD + C+ T + H S +
Sbjct: 539 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLT-SGMELKD 596
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
N L+S DS VK+W++ + +CL G
Sbjct: 597 N--ILVSGNADSTVKIWDIKTGQCLQTLQG 624
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV--DRMLAKSSMESSEPQNDQQ 167
+++AY+ H+ + G D I L +R+++ S + + +
Sbjct: 356 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT 415
Query: 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
G +RTL H V + + I+ SGS D+T+K+++ H ++ VR
Sbjct: 416 GK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGEC--IHTLYGHTSTVR 470
Query: 228 CLSFHP------------------CGDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKI 268
C+ H G + V H +R DGR SG+ D +K+
Sbjct: 471 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 530
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD + C+ T + H + SL F +G +++S D+ +++W++ + C+ TG
Sbjct: 531 WDPETETCLHTL-QGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Query: 329 SMGQQFEL 336
S+ EL
Sbjct: 587 SLTSGMEL 594
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
DH V C+ F +A+G +KT ++F+ + + K I ES S D
Sbjct: 198 DHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGEL--VAKLIDES------SNENKDD 248
Query: 237 YMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
D ++ + +S DG++ +G++D I+IWD +S+K + + H+ +I SL F
Sbjct: 249 NTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHE-QDIYSLDFF 306
Query: 296 RNGKYLLSSGKDSLVKLWELSSARC 320
+G L+S D V++W+L +++C
Sbjct: 307 PDGDRLVSGSGDRSVRIWDLRTSQC 331
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/216 (23%), Positives = 93/216 (43%)
Query: 94 LEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD--RM 151
LE+ +P+ + + + H S FS DG+ ATG + + ++ +V +
Sbjct: 175 LEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGEL 233
Query: 152 LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS 211
+AK ESS +N LY I V C F P +LA+G++DK ++++D S
Sbjct: 234 VAKLIDESSN-ENKDDNTTASGDLY--IRSV-C--FSPDGKLLATGAEDKLIRIWDLSTK 287
Query: 212 SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250
+ K + ++ + L F P GD +V G+ +R++
Sbjct: 288 RIIKILRGHEQDIY--SLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVA 345
Query: 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285
S DG++ +GS D +++WD + V ++
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVD--RMLA-----KSSMESSE--PQNDQ----QGH 169
R+ FS DG+L ATG+ D I+I D+ R++ + + S + P D+ G
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 170 PVIRTLYD----------HIEE-VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHK 218
+R ++D IE+ VT + P ++A+GS D+TV+++D + + +
Sbjct: 319 RSVR-IWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 219 TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW--DGVSSK- 275
+ E+ + H Y V +S++G SGS D +K+W +G S K
Sbjct: 378 SGNENG-----NGHEDSVYSVA---------FSNNGEQIASGSLDRTVKLWHLEGKSDKK 423
Query: 276 --CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
C T+ D + S+ T + +Y+LS KD V W+ +S L+ G
Sbjct: 424 STCEVTYIGHKDF--VLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQG 474
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
DH V C+ F +A+G +KT ++F+ + + K I ES S D
Sbjct: 198 DHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGEL--VAKLIDES------SNENKDD 248
Query: 237 YMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
D ++ + +S DG++ +G++D I+IWD +S+K + + H+ +I SL F
Sbjct: 249 NTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWD-LSTKRIIKILRGHE-QDIYSLDFF 306
Query: 296 RNGKYLLSSGKDSLVKLWELSSARC 320
+G L+S D V++W+L +++C
Sbjct: 307 PDGDRLVSGSGDRSVRIWDLRTSQC 331
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/216 (23%), Positives = 93/216 (43%)
Query: 94 LEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD--RM 151
LE+ +P+ + + + H S FS DG+ ATG + + ++ +V +
Sbjct: 175 LEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGEL 233
Query: 152 LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS 211
+AK ESS +N LY I V C F P +LA+G++DK ++++D S
Sbjct: 234 VAKLIDESSN-ENKDDNTTASGDLY--IRSV-C--FSPDGKLLATGAEDKLIRIWDLSTK 287
Query: 212 SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250
+ K + ++ + L F P GD +V G+ +R++
Sbjct: 288 RIIKILRGHEQDIY--SLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVA 345
Query: 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285
S DG++ +GS D +++WD + V ++
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVD--RMLA-----KSSMESSE--PQNDQ----QGH 169
R+ FS DG+L ATG+ D I+I D+ R++ + + S + P D+ G
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 170 PVIRTLYD----------HIEE-VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHK 218
+R ++D IE+ VT + P ++A+GS D+TV+++D + + +
Sbjct: 319 RSVR-IWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 219 TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW--DGVSSK- 275
+ E+ + H Y V +S++G SGS D +K+W +G S K
Sbjct: 378 SGNENG-----NGHEDSVYSVA---------FSNNGEQIASGSLDRTVKLWHLEGKSDKK 423
Query: 276 --CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
C T+ D + S+ T + +Y+LS KD V W+ +S L+ G
Sbjct: 424 STCEVTYIGHKDF--VLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQG 474
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 129 (50.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S +I S S DG ++IW C+ TF + HD A + + F G L+SSG D L
Sbjct: 534 FSPVDQILGSASADGSVRIWSIQDFSCLKTF-EGHD-ASVLKIIFVSRGTQLVSSGSDGL 591
Query: 310 VKLWELSSARCL 321
VKLW + + C+
Sbjct: 592 VKLWTIKTNECV 603
Score = 106 (42.4 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
S S D I+IWD SS+CV + + +++L F+ +G L+SSG+D + +W+L
Sbjct: 167 SSSSDCAIRIWDLRSSRCVCVLESHY--SPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 319 R 319
+
Sbjct: 225 K 225
Score = 103 (41.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 39/155 (25%), Positives = 68/155 (43%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L+ H + + ++ + A+ +KDK+V+++ SS R V C++
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGR-----------VHCVA-QGT 429
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD--------GVSSKCVATFSKAHDG 286
G VG+ + + SGS+D +K+WD GV + +AH+
Sbjct: 430 GHSNAVGS----IACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHE- 484
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
+++S+ + N K L S +D KLW LS R L
Sbjct: 485 KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLL 519
Score = 67 (28.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F ++ +LA+G D T+K++D K H S V + FHP
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYC--THNLKGSSGVVHLVEFHP 158
Score = 61 (26.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME-SSEPQNDQQGHPVIRTL 175
H P + +F L ATG D +IK+ DV + +++ SS + + HP I L
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRL 163
Score = 52 (23.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM 157
SH SP A AFS DG + D + D+ K ++
Sbjct: 190 SHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTI 230
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 109 (43.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 151 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 207
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 208 LFDLRADQELLMYS 221
Score = 83 (34.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 107 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 163
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 164 IKLWDVRDSMCRQTFIG 180
Score = 80 (33.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 234 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 291
Query: 310 VKLW 313
+K+W
Sbjct: 292 LKIW 295
Score = 76 (31.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 85 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 142
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 143 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 200
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 201 SDDATCRLF 209
Score = 75 (31.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 62
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 63 PSGNFVACGGLDNICSIYS 81
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 130 (50.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 418 FSPMDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGTQLLSSGSDGL 475
Query: 310 VKLWELSSARCL 321
VKLW + + C+
Sbjct: 476 VKLWTIKNNECV 487
Score = 103 (41.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
S + D I++W C+A + AH A ++SL F+ +G +LSSG+D + +W+L S
Sbjct: 78 SSATDAAIRVWSLQDRSCLAVLT-AHYSA-VTSLAFSADGHTMLSSGRDKICIIWDLQSC 135
Query: 319 R 319
+
Sbjct: 136 Q 136
Score = 59 (25.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F P++ +LA+G D V+++D + H V ++FHP
Sbjct: 16 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHY--GTHHFRGSPGVVHLVAFHP 69
Score = 56 (24.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H +P AF L ATG D ++++ D+ R
Sbjct: 16 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVR 48
Score = 45 (20.9 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS 211
L+ H + V L+ + AS +KD++V+++ +K+
Sbjct: 280 LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKA 316
Score = 42 (19.8 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
A +T+H S + AFS DG + D I D+
Sbjct: 97 AVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDL 132
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
H + A + + +L ATGS D + K+
Sbjct: 367 HDKDINSVAIAPNDKLLATGSQDRTAKL 394
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200
+S+ L + +S + + Q D + T H + V + + AS S D
Sbjct: 195 SSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLD 254
Query: 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG 260
+TV ++ ++ S + + + + V C+ + P Y V T + + I SG
Sbjct: 255 QTVTVWSFATKSAKLVLRDHEHA--VECVEWAPDTAYTNV-TGQ---QPEGNSTHILFSG 308
Query: 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320
S+D IK W+ +++ V AH+ + L F GKYL+S D +++WELS+ RC
Sbjct: 309 SRDRSIKAWN-INTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDKTLRVWELSAQRC 366
Query: 321 LIA 323
+ A
Sbjct: 367 MKA 369
Score = 121 (47.7 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 254 GRIYCSGSKDGDIKIWD-GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
G+ S S D IK+WD G + C+ + K H+ +SS+TF G ++LS+ +D +K
Sbjct: 160 GKQLVSCSSDLSIKLWDFGQTYDCLKSL-KGHEHT-VSSVTFLPTGDFVLSASRDHTIKQ 217
Query: 313 WELSSARCLIAYTG 326
W++S+ C+ + G
Sbjct: 218 WDISTGYCVYTFRG 231
Score = 53 (23.7 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 107 PAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-MLAKSSMESSEPQND 165
P ET +T H+ P F + A+ S DA+IK+ D + L ++ ++ ND
Sbjct: 94 PRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVND 153
>POMBASE|SPAC664.15 [details] [associations]
symbol:caf4 "CCR4-Not complex subunit Caf4/Mdv1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISO] [GO:0000266
"mitochondrial fission" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030014 "CCR4-NOT complex"
evidence=ISO] [GO:0030015 "CCR4-NOT core complex" evidence=NAS]
[GO:0051020 "GTPase binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC664.15 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0030015 OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354
GO:GO:0051020 OMA:CVQTLDV PIR:T50245 PIR:T50289
RefSeq:XP_001713057.1 ProteinModelPortal:Q9P7I3 STRING:Q9P7I3
EnsemblFungi:SPAC664.15.1 GeneID:3361526 KEGG:spo:SPAC664.15
NextBio:20811568 Uniprot:Q9P7I3
Length = 651
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 57/197 (28%), Positives = 86/197 (43%)
Query: 128 SIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV---IRTLYDHIEEVTC 184
+I ATGS+D ++++ ++D + E N PV L H VT
Sbjct: 381 AIQDSFIATGSMDTTVRLWNLDNDVLHKDNPVEESLNSPPDQPVDNATNVLTSHTAPVTA 440
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244
L S +L +G+ DKTV+ +D + IQ FV + ++V +
Sbjct: 441 LALS-SDDVLITGADDKTVRQWDIVTG------RCIQTLDFVWAETHDTSTSQILVSDTY 493
Query: 245 ----FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300
F+ L D + SG+ DG I+IWD V +F H A ISSL F N +
Sbjct: 494 KQEPFIRALDCLDAAV-ASGTVDGLIRIWDLRIGLPVRSFI-GHT-APISSLQFDSN--H 548
Query: 301 LLSSGKDSLVKLWELSS 317
L S D+ V++W+L S
Sbjct: 549 LYSGSYDNSVRIWDLRS 565
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 60/227 (26%), Positives = 103/227 (45%)
Query: 123 RAGAFSIDGQLCATGSVDASIKILDVD-----RMLAKSSMESSEPQNDQQGHPVI----- 172
R+ AFS DG+ ATG D I+I D+ R+L E + G ++
Sbjct: 350 RSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGD 409
Query: 173 RT--LYD----------HIEE-VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT 219
RT L+D H ++ VT + F P +A+GS DK ++++ S + V + H
Sbjct: 410 RTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGH 469
Query: 220 IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279
+ES + ++F P G Y+V G+ ++L+ + C + + G+ C T
Sbjct: 470 -EESVY--SVAFSPDGKYLVSGSLDNTIKLWE----LQCVSNVAPSMYKEGGI---CKQT 519
Query: 280 FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
F+ D I S+T + +GK+++S KD ++ W S + G
Sbjct: 520 FTGHKDF--ILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQG 564
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/235 (25%), Positives = 103/235 (43%)
Query: 93 DLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI-LDVDRM 151
D S+V P+ P + + H S FS DG+ ATG A++ ++ ++
Sbjct: 274 DWTVTSNV-PNKEPPISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKL 332
Query: 152 LAKSSMESSEPQNDQQGHPVI-----RTLYDHIEE--VTCLEFHPSAPILASGSKDKTVK 204
+ ESS+ + D V + L +E+ + + ++ +
Sbjct: 333 ITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIY 392
Query: 205 MFDYSKSSVRKAHKTIQESTFVR--CLSFHPCGDY-MVVGTDHFVLR-LYSSDGRIYCSG 260
D+SK KT+ + R CL G+ +++ TD V ++S DG+ +G
Sbjct: 393 SLDFSKDG-----KTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAG 447
Query: 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
S D I+IW SS + H+ + + S+ F+ +GKYL+S D+ +KLWEL
Sbjct: 448 SLDKVIRIW--TSSGTLVEQLHGHEES-VYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DG+ +G +D I+IWD ++ K V H+ EI SL F+++GK L+S D
Sbjct: 354 FSPDGKYLATGVEDQQIRIWD-IAQKRVYRLLTGHE-QEIYSLDFSKDGKTLVSGSGDRT 411
Query: 310 VKLWELSSA-RCLIAYTGAG 328
V LW++ + + LI +T G
Sbjct: 412 VCLWDVEAGEQKLILHTDDG 431
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 145 (56.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT++ L + S S D +++WD C+ T +K +
Sbjct: 395 YTIKWSPTGP----GTNNPNANL------MLASASFDSTVRLWDVDRGICIHTLTKHQE- 443
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 444 -PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 55/250 (22%), Positives = 106/250 (42%)
Query: 71 MKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQ-----YETAYVTSHKSPCRAG 125
++ +E + +N ++ + G +E S +D P+ Q Y H + A
Sbjct: 57 LQYVEAEVSIN--EDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQHAAAAAAA 114
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTLYDHIEEVTC 184
A + + Q A + + + +A + + E D + P L H EV
Sbjct: 115 AAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFI 174
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244
++P + +LASGS D T ++++ S++S + + C+ G + D
Sbjct: 175 CAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLR----HCI--REGGQDVPSNKDV 228
Query: 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
L ++S+G + +GS DG +IW +T + H G I +L + + G ++LS+
Sbjct: 229 TSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKWNKKGNFILSA 284
Query: 305 GKDSLVKLWE 314
G D +W+
Sbjct: 285 GVDKTTIIWD 294
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 145 (56.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT++ L + S S D +++WD C+ T +K +
Sbjct: 395 YTIKWSPTGP----GTNNPNANL------MLASASFDSTVRLWDVDRGICIHTLTKHQE- 443
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 444 -PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 54/251 (21%), Positives = 107/251 (42%)
Query: 71 MKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQ-----YETAYVTSHKSPCRAG 125
++ +E + +N ++ + G +E S +D P+ Q Y H + A
Sbjct: 57 LQYVEAEVSIN--EDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQHAAAAAAA 114
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQ--GHPVIRTLYDHIEEVT 183
A + + Q A + + + +A + + E D + + + L H EV
Sbjct: 115 AAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPSNKAV-VLRGHESEVF 173
Query: 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD 243
++P + +LASGS D T ++++ S++S + + C+ G + D
Sbjct: 174 ICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLR----HCI--REGGQDVPSNKD 227
Query: 244 HFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
L ++S+G + +GS DG +IW +T + H G I +L + + G ++LS
Sbjct: 228 VTSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKWNKKGNFILS 283
Query: 304 SGKDSLVKLWE 314
+G D +W+
Sbjct: 284 AGVDKTTIIWD 294
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 145 (56.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT++ L + S S D +++WD C+ T +K +
Sbjct: 395 YTIKWSPTGP----GTNNPNANL------MLASASFDSTVRLWDVDRGICIHTLTKHQE- 443
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 444 -PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 54/250 (21%), Positives = 106/250 (42%)
Query: 71 MKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQ-----YETAYVTSHKSPCRAG 125
++ +E + +N ++ + G +E S +D P+ Q Y + A
Sbjct: 57 LQYVEAEVSIN--EDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAA 114
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTLYDHIEEVTC 184
A + + Q A + + + +A + + E D + P L H EV
Sbjct: 115 AAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFI 174
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244
++P + +LASGS D T ++++ S++S + + + C+ G + D
Sbjct: 175 CAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLR----HCI--REGGQDVPSNKDV 228
Query: 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
L ++S+G + +GS DG +IW +T + H G I +L + + G ++LS+
Sbjct: 229 TSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKWNKKGNFILSA 284
Query: 305 GKDSLVKLWE 314
G D +W+
Sbjct: 285 GVDKTTIIWD 294
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 135 (52.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H E V + + ++AS S D+TV+++ + KA E V C+S+
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKEC-KAELREHEHV-VECISW 284
Query: 232 HPCGDY-MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290
P + ++ + G SGS+D IK+WD C+ T HD +
Sbjct: 285 APESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLV-GHDNW-VR 342
Query: 291 SLTFTRNGKYLLSSGKDSLVKLWELSSARC 320
+ GKY++S D +++W+ + RC
Sbjct: 343 GVLVHPGGKYIVSCADDKTLRIWDYKNKRC 372
Score = 128 (50.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 46/198 (23%), Positives = 94/198 (47%)
Query: 137 GSVDASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
G D S++ + D ++LA S + + D QG IRT++ H V+ + P+
Sbjct: 148 GHTD-SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ S S+DKT+KM++ + K +E +VR + + G + ++ +R++
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHRE--WVRMVRPNQDGTLIASSSNDQTVRVW--- 261
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSK-AHDGA-EISSLTFTRNGK---YLLSSGKDS 308
+ + +++ + V +C++ + AH E + ++GK +LLS +D
Sbjct: 262 --VVATKECKAELREHEHVV-ECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 309 LVKLWELSSARCLIAYTG 326
+K+W++S CL+ G
Sbjct: 319 TIKMWDVSIGMCLMTLVG 336
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 175 LYDHIEEVTCLEFHPSA--PIL--ASGSKDK-TVKMFDYSKSSVRKAHKTIQ--ESTFVR 227
L +H V C+ + P + P + A+GS+ K + K + S R KTI+ + +
Sbjct: 272 LREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRD--KTIKMWDVSIGM 329
Query: 228 CLSFHPCGDYMVVGTDHFVLR-LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
CL +VG D++V L G+ S + D ++IWD + +C T S AH+
Sbjct: 330 CLM-------TLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLS-AHEH 381
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++SL F + Y+++ D VK+WE
Sbjct: 382 F-VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 49 (22.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
DP P E ++ H+SP F + + S DA+IK+ D
Sbjct: 90 DPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWD 136
Score = 44 (20.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/71 (21%), Positives = 30/71 (42%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAP----EPAQYETAYVTSHKSPCRAGAFSIDGQLCAT 136
+P+ ++ P + + D + E +E + H + +F G+L A+
Sbjct: 109 SPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERT-LKGHTDSVQDISFDHTGKLLAS 167
Query: 137 GSVDASIKILD 147
S D +IK+ D
Sbjct: 168 CSADMTIKLWD 178
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 251
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 252 LFDLRADQELLMYS 265
Score = 83 (34.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 129 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 187 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 251
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 252 LFDLRADQELLMYS 265
Score = 83 (34.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 129 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 187 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 251
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 252 LFDLRADQELLMYS 265
Score = 83 (34.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 129 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 187 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 251
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 252 LFDLRADQELLMYS 265
Score = 83 (34.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 129 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 187 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV-K 311
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D +
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSDDATCR 251
Query: 312 LWELSSARCLIAYT 325
L++L + + L+ Y+
Sbjct: 252 LFDLRADQELLMYS 265
Score = 83 (34.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD ++++ S + + + G + H +
Sbjct: 129 REGNVRVSRELPGHTGYLSCC-RFLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P SG+ D ++K++D S R+ I + + ++F P G G
Sbjct: 187 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF--IGHESDINAVAFFPNGYAFTTG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 75 (31.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 114 (45.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD V TF + ++ S+TF ++S G D+ +K+W+
Sbjct: 155 QLACTGSDDGTVKLWDIRKKASVHTFQNTY---QVLSVTFNDTSDQIISGGIDNDIKVWD 211
Query: 315 LSSARCLIAYTGAG 328
L + + + G G
Sbjct: 212 LRQNKLIYSMQGHG 225
Score = 108 (43.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K + +S G ++ L+ + +G YLLS+ D+ V++W++
Sbjct: 200 SGGIDNDIKVWDLRQNKLI--YSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPF 257
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 258 APKERCVKIFQG 269
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 89 CENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRL-KGHTSF-VNS 146
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L +G D VKLW++
Sbjct: 147 CFPARRGPQLACTGSDDGTVKLWDI 171
Score = 69 (29.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
P++ P++ L H EV C +FHP+ LAS D+ + M++
Sbjct: 40 PRSSSLQAPIM-LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWN 84
Score = 64 (27.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 172 IRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
++ L H V +C + +GS D TVK++D K + H T Q + V ++
Sbjct: 134 VKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKA--SVH-TFQNTYQVLSVT 190
Query: 231 FHPCGDYMVVG 241
F+ D ++ G
Sbjct: 191 FNDTSDQIISG 201
Score = 55 (24.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR----KAHKTIQESTF 225
TL H V L ++ +L S S DKTV ++D S++ R K H + S F
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWD-SETGERVKRLKGHTSFVNSCF 148
Score = 48 (22.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
T++V S P R G QL TGS D ++K+ D+ + + + +++
Sbjct: 141 TSFVNSC-FPARRGP-----QLACTGSDDGTVKLWDIRKKASVHTFQNT 183
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMVV-GTDHFVL 247
V C FHP G + G D +L
Sbjct: 59 VYCCKFHPNGATLASSGYDRLIL 81
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
Q P I+T H EV +++ P+ +LAS S D T+K++ + + H + +
Sbjct: 338 QDRP-IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC--VHDLQAHNKEI 394
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286
+ + P G GT + L + S S D +++WD C+ T +K +
Sbjct: 395 YTIKWSPTGP----GTSNPNANL------MLASASFDSTVRLWDVDRGICIHTLTKHQE- 443
Query: 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ S+ F+ +G+YL S D V +W + + +Y G G +
Sbjct: 444 -PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGI 486
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 54/250 (21%), Positives = 106/250 (42%)
Query: 71 MKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQ-----YETAYVTSHKSPCRAG 125
++ +E + +N ++ + G +E S +D P+ Q Y + A
Sbjct: 57 LQYVEAEVSIN--EDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAA 114
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTLYDHIEEVTC 184
A + + Q A + + + +A + + E D + P L H EV
Sbjct: 115 AAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFI 174
Query: 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244
++P + +LASGS D T ++++ S++S + + + C+ G + D
Sbjct: 175 CAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLR----HCI--REGGQDVPSNKDV 228
Query: 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
L ++S+G + +GS DG +IW +T + H G I +L + + G ++LS+
Sbjct: 229 TSLD-WNSEGTLLATGSYDGFARIWTK-DGNLASTLGQ-HKGP-IFALKWNKKGNFILSA 284
Query: 305 GKDSLVKLWE 314
G D +W+
Sbjct: 285 GVDKTTIIWD 294
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 99 (39.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 41/176 (23%), Positives = 81/176 (46%)
Query: 92 LDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLC--ATGSVDASIKILDVD 149
L +E + D++ A E + +TA TS P RA + + +L A G +D+ +
Sbjct: 232 LPVEPDDDIEVLADETS--DTAEETS---PVRAVSRTPSKRLSQPAGGLLDS------IT 280
Query: 150 RMLAKSSMES-SEPQNDQQGHP----VIRT------LYD-HIEEVTCLEFHPSAPILASG 197
+ + S+ S PQ++ + HP +R ++D H EV ++F P + +LA+G
Sbjct: 281 NIFGRRSLSSFPPPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATG 340
Query: 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
D+ VK+++ + + + F G Y++ ++ F R+++ D
Sbjct: 341 GMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD 396
Score = 92 (37.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++S DG +GS DG + +W+ ++ K T +K H + I+++ ++ G +++S K +
Sbjct: 542 VFSPDGNYVAAGSADGALYVWNVLTGKLERTLAK-HHSSPINAVAWSPAGAHVVSVDKGN 600
Query: 309 LVKLW 313
LW
Sbjct: 601 KAVLW 605
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 117 (46.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS D +++W V F+ H G + SL F+ NGKYL S+G+D +KLW+L+S
Sbjct: 439 TGSTDKTVRLWSTQQGNSVRLFT-GHRGP-VLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Score = 105 (42.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
VL L +S +G+ S +D +K+WD ++S + + H I+SLTF+ + + S+
Sbjct: 467 VLSLAFSPNGKYLASAGEDQRLKLWD-LASGTLYKELRGHTD-NITSLTFSPDSSLVASA 524
Query: 305 GKDSLVKLWELSSARCLIAYTGAGS 329
D+ V++W++ S+ C G+ S
Sbjct: 525 SMDNSVRVWDIRSSHCSTPADGSSS 549
Score = 85 (35.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 175 LYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
LY H V L+ P + AS S D+T +++ + ++ + + V C+ FHP
Sbjct: 375 LYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAG--HLADVDCVKFHP 432
Query: 234 CGDYMVVGTDHFVLRLYSS 252
+Y+ G+ +RL+S+
Sbjct: 433 NSNYLATGSTDKTVRLWST 451
Score = 52 (23.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 146 LDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204
+DV R+ LA +E + ++D G + + L H V F + L S S+D +++
Sbjct: 305 VDVSRIHLACDFLEEEDDEDDNLGTEM-KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIR 363
Query: 205 MFD 207
+D
Sbjct: 364 YWD 366
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 142 (55.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 42/172 (24%), Positives = 70/172 (40%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ + + H + + +
Sbjct: 348 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDAC--VHNLQAHRKEIYTIKW 405
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G +L S S D +++WD C T K + + S
Sbjct: 406 SPTGPTTSNPNSSIML----------ASASFDSTVRLWDMEQGVCTHTLRKHQE--PVYS 453
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343
+ F+ +GKYL S D V +W S + +Y G G + FE+ D
Sbjct: 454 VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGI---FEVCWNAQGD 502
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/140 (26%), Positives = 68/140 (48%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H EV ++P + +LASGS D T ++++ +++ R + + + C+
Sbjct: 171 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLR----HCIRE--- 223
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G + V ++SDG + +GS DG +IW + +T + H G I +L +
Sbjct: 224 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-NGNLASTLGQ-HKGP-IFALKW 280
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ G Y+LS+G D +W+
Sbjct: 281 NKKGNYILSAGVDKTTIIWD 300
Score = 43 (20.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
DG L ATGS D +I + LA + + P
Sbjct: 242 DGTLLATGSYDGFARIWTENGNLASTLGQHKGP 274
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 143 (55.4 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 60/252 (23%), Positives = 105/252 (41%)
Query: 79 GLNPIQEILIG-PGL--DLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCA 135
G +P+ +L G G ++ D D + +T + + R F + Q
Sbjct: 144 GNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGH 203
Query: 136 TGSVDASIKILDVD-RMLAKSSMESSEPQNDQQ-GHPVIRTLYDHIEEVTCLEFHPSAPI 193
T V S+ I + R+ S +++ D + RT Y H +V ++F P
Sbjct: 204 TADVQ-SVSISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNR 262
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+GS+D T ++FD +R H+ +Q + + P GD + H +S
Sbjct: 263 FGTGSEDGTCRLFD-----IRTEHQ-LQ-------VYYQPHGDGDI---PHVTSMAFSIS 306
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFS---KAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
GR+ G +GD +WD + +K V +H+G IS L + +G L + D+ +
Sbjct: 307 GRLLFVGYSNGDCYVWDTLLAKVVLNLGGVQNSHEG-RISCLGLSADGSALCTGSWDTNL 365
Query: 311 KLWELSSARCLI 322
K+W R +I
Sbjct: 366 KIWAFGGHRSVI 377
Score = 37 (18.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 31 DGHHPMAITLQSSCNVVEPC 50
DG+HP++ L V C
Sbjct: 143 DGNHPVSRMLSGHKGYVSSC 162
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 122 CRAGAFSIDGQL---CATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +S+ QL TG S++I + ++ S S D + ++RTL
Sbjct: 43 CRVNVWSV-AQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLL 101
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS D +K++D + +K+ ++ VRCL F P G
Sbjct: 102 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA--VRCLRFSPDGK 159
Query: 237 YMVVGTDHFVLRLYS-SDGRI 256
++ D ++L+ + G++
Sbjct: 160 WLASAADDHTVKLWDLTAGKV 180
Score = 136 (52.9 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D DIK+WD C+ + K+H A + L F+ +GK+L S+ D VKLW
Sbjct: 116 GSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQA-VRCLRFSPDGKWLASAADDHTVKLW 173
Query: 314 ELSSARCLIAYTG 326
+L++ + + +TG
Sbjct: 174 DLTAGKVMFEFTG 186
Score = 52 (23.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
AQ +T H +P + S +L GS SI++ D++
Sbjct: 51 AQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 133 (51.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 529 FSPTDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGSQLLSSGSDGL 586
Query: 310 VKLWELSSARCL 321
+KLW + S C+
Sbjct: 587 LKLWTIKSNECV 598
Score = 57 (25.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
H +P + AF L ATG D ++++ D+
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Score = 50 (22.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F ++ +LA+G D V+++D + H V ++FHP
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHY--GTHHFRGSPGVVHLVAFHP 161
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 97 ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
+S S P Q +T H + A S + +L ATGS D + K+
Sbjct: 458 KSTAADSGPVLLQAQTTR-RCHDKDINSLAVSPNDKLLATGSQDRTAKL 505
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDS 308
+SSDG ++ +G KDG I +WD ++ + F + H E ++ + F R ++++S+ KDS
Sbjct: 111 FSSDGLLFATGGKDGVIVLWDILAER--GMF-RLHGHKESVTQMKFVRGDRFIISTSKDS 167
Query: 309 LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV 344
L+K W ++S C YT S + + ++L D V
Sbjct: 168 LIKFWSIASQSCF--YTVMDSRNEIYSMSLHRDETV 201
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 137 (53.3 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS DG +GS DG IKIWD S C+ TF++ H A ++ + F + G+ L SS D
Sbjct: 347 YSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTE-HTSA-VTQVQFAKRGQVLFSSSLDGT 404
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
++ W+L R +T + QF L VD
Sbjct: 405 IRAWDLIRFRNFKTFTATSRV--QFNC-LAVD 433
Score = 54 (24.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 23/122 (18%), Positives = 55/122 (45%)
Query: 127 FSIDGQLCATGSVDASI-KILDVDRMLAKSSMESSEPQNDQQGHPV-----IRTLYDHIE 180
FS D ++ T S D ++ K +R K E S+ ++D P+ + +
Sbjct: 198 FSHDQEIIYTVSKDGALFKWEYTER--PKPENEDSDSEDDATDKPMSWRITAKNFFYADG 255
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
++ C FHP + +L G + ++++ ++ ++ Q + V ++ + G+++
Sbjct: 256 KLKCACFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNA--VNTVNINKTGEWLAF 313
Query: 241 GT 242
G+
Sbjct: 314 GS 315
Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 226 VRCLSFHPCGDYMVVGTDHFVLRLY 250
++C FHP +VVG + RLY
Sbjct: 257 LKCACFHPQSKLLVVGFTNGEFRLY 281
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 137 (53.3 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YS DG +GS DG IKIWD S C+ TF++ H A ++ + F + G+ L SS D
Sbjct: 347 YSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTE-HTSA-VTQVQFAKRGQVLFSSSLDGT 404
Query: 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341
++ W+L R +T + QF L VD
Sbjct: 405 IRAWDLIRFRNFKTFTATSRV--QFNC-LAVD 433
Score = 54 (24.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 23/122 (18%), Positives = 55/122 (45%)
Query: 127 FSIDGQLCATGSVDASI-KILDVDRMLAKSSMESSEPQNDQQGHPV-----IRTLYDHIE 180
FS D ++ T S D ++ K +R K E S+ ++D P+ + +
Sbjct: 198 FSHDQEIIYTVSKDGALFKWEYTER--PKPENEDSDSEDDATDKPMSWRITAKNFFYADG 255
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
++ C FHP + +L G + ++++ ++ ++ Q + V ++ + G+++
Sbjct: 256 KLKCACFHPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNA--VNTVNINKTGEWLAF 313
Query: 241 GT 242
G+
Sbjct: 314 GS 315
Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 226 VRCLSFHPCGDYMVVGTDHFVLRLY 250
++C FHP +VVG + RLY
Sbjct: 257 LKCACFHPQSKLLVVGFTNGEFRLY 281
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 119 (46.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS D +++W V F+ H G + SL F+ NGKYL S+G+D +KLW+L+S
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFT-GHRGP-VLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 102 (41.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
VL L +S +G+ S +D +K+WD ++S + + H I+SLTF+ + + S+
Sbjct: 471 VLSLAFSPNGKYLASAGEDQRLKLWD-LASGTLFKELRGHTD-NITSLTFSPDSSLIASA 528
Query: 305 GKDSLVKLWELSSARCLIAYTGAGS 329
D+ V++W++ + C G+ S
Sbjct: 529 SMDNSVRVWDIRNTHCSAPTDGSSS 553
Score = 87 (35.7 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 175 LYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
LY H V ++ P + ASGS D+T +++ + ++ + + V C+ FHP
Sbjct: 379 LYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAG--HLADVDCVKFHP 436
Query: 234 CGDYMVVGTDHFVLRLYSS 252
+Y+ G+ +RL+S+
Sbjct: 437 NSNYLATGSTDKTVRLWSA 455
Score = 55 (24.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 146 LDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204
+DV R+ LA +E + ++D G + + L H V F + L S S+D +++
Sbjct: 309 VDVSRIHLACDILEEEDDEDDDVGTEM-KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIR 367
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG----RIYCSG 260
+D + ++ + V + P Y G+ RL+S D RIY
Sbjct: 368 YWDLGSFTNTVLYQG--HAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGH 425
Query: 261 SKDGD 265
D D
Sbjct: 426 LADVD 430
>TAIR|locus:2153443 [details] [associations]
symbol:AT5G54200 "AT5G54200" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB013387 HOGENOM:HOG000239143 IPI:IPI00537060
RefSeq:NP_200231.1 UniGene:At.27971 ProteinModelPortal:Q9FK21
SMR:Q9FK21 PRIDE:Q9FK21 EnsemblPlants:AT5G54200.1 GeneID:835508
KEGG:ath:AT5G54200 TAIR:At5g54200 InParanoid:Q9FK21 OMA:KERRSTD
PhylomeDB:Q9FK21 ProtClustDB:CLSN2916439 Genevestigator:Q9FK21
Uniprot:Q9FK21
Length = 825
Score = 96 (38.9 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD- 236
H+++V L + S +L+S S DKTV+++D S + K S +V C+ F+P D
Sbjct: 467 HLDDVLDLSWSKSQHLLSS-SMDKTVRLWDLSSKTCLKV---FSHSDYVTCIQFNPVDDN 522
Query: 237 YMVVGTDHFVLRLYS 251
Y + G+ +R++S
Sbjct: 523 YFISGSLDAKVRIWS 537
Score = 70 (29.7 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
S D ++ DGV V F + S + T NGK+L+S+ +DS V +W S
Sbjct: 621 SADSRTRVVDGVD--LVHKFKGFRNTNSQISASLTSNGKFLVSASEDSNVYVWNYDS 675
Score = 62 (26.9 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQND 165
A +++ + +HK + FS+DG+ A+ D I+I V K + S + Q D
Sbjct: 352 ALFKSQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQED 409
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 251 SSDGRIYCSGSKDGDIKIWD 270
+S+G+ S S+D ++ +W+
Sbjct: 653 TSNGKFLVSASEDSNVYVWN 672
Score = 41 (19.5 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 48 EPCPPSDRLSQLVH-IGLAHEPD 69
EP S+R +L+ +GL++EPD
Sbjct: 86 EPESVSERRIRLLRGLGLSNEPD 108
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 139 (54.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 42/159 (26%), Positives = 82/159 (51%)
Query: 175 LYDHIEEVTCLEFH-PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
++ H + VT + ++P + S S+DK++ ++D + + V+ + S + + F
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLT-NPVQNVGEGAGASEYG--VPFR- 69
Query: 234 CGDYMVVGTDHFVLRLY-SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292
+ G HFV + SSDG+ SGS DG++++WD +S+ HD ++ S+
Sbjct: 70 ----RLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD-LSTGVTTRRFVGHD-KDVLSV 123
Query: 293 TFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331
F+ + + ++S+ +D +KLW + C YT G +G
Sbjct: 124 AFSVDNRQIVSASRDRTIKLWN-TLGEC--KYTIGGDLG 159
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 93 (37.8 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S DG + SG KDG K+WD K + + G+ I+SL F+ Y L + D +
Sbjct: 210 SPDGSLCASGGKDGVAKLWDVKEGKHLYSLET---GSTINSLCFSPCD-YWLCAATDRFI 265
Query: 311 KLWELSS 317
++W L S
Sbjct: 266 RIWNLES 272
Score = 77 (32.2 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
IR+ H +V + F P + S S+DKT+K+++ + + + Q + ++ C+ F
Sbjct: 107 IRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRF 165
Query: 232 HPCGDYMVV 240
P + ++
Sbjct: 166 SPSPNQAII 174
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSL 309
S + I S D +K+W+ C + + H G ++++T + +G S GKD +
Sbjct: 168 SPNQAIIVSCGWDKLVKVWN--LKNCDLNKNLEGHTGV-LNTVTISPDGSLCASGGKDGV 224
Query: 310 VKLWELSSARCLIAY-TGA 327
KLW++ + L + TG+
Sbjct: 225 AKLWDVKEGKHLYSLETGS 243
Score = 47 (21.6 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
+T H + S DG +GS D S+++ D+
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDL 101
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 93 (37.8 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S DG + SG KDG K+WD K + + G+ I+SL F+ Y L + D +
Sbjct: 210 SPDGSLCASGGKDGVAKLWDVKEGKHLYSLET---GSTINSLCFSPCD-YWLCAATDRFI 265
Query: 311 KLWELSS 317
++W L S
Sbjct: 266 RIWNLES 272
Score = 77 (32.2 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
IR+ H +V + F P + S S+DKT+K+++ + + + Q + ++ C+ F
Sbjct: 107 IRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRF 165
Query: 232 HPCGDYMVV 240
P + ++
Sbjct: 166 SPSPNQAII 174
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSL 309
S + I S D +K+W+ C + + H G ++++T + +G S GKD +
Sbjct: 168 SPNQAIIVSCGWDKLVKVWN--LKNCDLNKNLEGHTGV-LNTVTISPDGSLCASGGKDGV 224
Query: 310 VKLWELSSARCLIAY-TGA 327
KLW++ + L + TG+
Sbjct: 225 AKLWDVKEGKHLYSLETGS 243
Score = 47 (21.6 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
+T H + S DG +GS D S+++ D+
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDL 101
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 132 (51.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 529 FSPTDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGAQLLSSGSDGL 586
Query: 310 VKLWELSSARCL 321
+KLW + S C+
Sbjct: 587 LKLWTIKSNECV 598
Score = 57 (25.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
H +P + AF L ATG D ++++ D+
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Score = 50 (22.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F ++ +LA+G D V+++D + H V ++FHP
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHY--GTHHFRGSPGVVHLVAFHP 161
Score = 42 (19.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 77 SIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCAT 136
++ L P+ E L P + + D+ P + Q H + A S + +L AT
Sbjct: 445 TVKLWPLPEAL--PSKNTASDGDLIPLQAQSTQ------RCHDKDINSLAVSPNDKLLAT 496
Query: 137 GSVDASIKI 145
GS D + K+
Sbjct: 497 GSQDRTAKL 505
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 102 (41.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
L+S G++ +KD ++WD +SSK + + + H+ ISSL T +G L + D
Sbjct: 240 LFSKSGKLLFI-AKDKTCEVWDSISSKTITSLT-GHEN-RISSLALTSDGTMLATGSWDE 296
Query: 309 LVKLWELS 316
V+LW S
Sbjct: 297 CVRLWSSS 304
Score = 67 (28.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 172 IRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAH--KTIQESTF-VR 227
I L H ++ L+F PS P + +G DK K++D +R A+ T +T +
Sbjct: 140 ISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWD-----LRAAYCCATFPGNTSDIN 194
Query: 228 CLSFHPCGDYMVVGTDHFVLRLY 250
+SF P V G + + R +
Sbjct: 195 SISFFPSNADFVTGAEDGIARCF 217
Score = 50 (22.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS---SVRKAHK 218
L H V+C ++ +L +GS DKT +D ++ SV K H+
Sbjct: 102 LVGHAGFVSCCKYVDDGHLL-TGSGDKTCMFWDIEQAKAISVLKGHE 147
Score = 45 (20.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/81 (25%), Positives = 34/81 (41%)
Query: 81 NPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVD 140
+P + + GL+ F D S P+ E S C+ + DG L TGS D
Sbjct: 72 SPSTKSIAAGGLN-NFCVVYDTSVPDADPVELVGHAGFVSCCK---YVDDGHLL-TGSGD 126
Query: 141 ASIKILDVDRMLAKSSMESSE 161
+ D+++ A S ++ E
Sbjct: 127 KTCMFWDIEQAKAISVLKGHE 147
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 116 (45.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 236 DYMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
+Y + F+L + YS DG+ SG+ DG I I+D + K + T + H I SLTF
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGH-AMPIRSLTF 198
Query: 295 TRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
+ + + L+++ D +K++++ A +G GS
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGS 233
Score = 109 (43.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D ++ + S DG IKI+D + AT S H G+ + ++ F+ + + +SS D
Sbjct: 198 FSTDSQLLVTASDDGYIKIYDVQHASLAATLS-GH-GSWVLNVAFSPDDAHFVSSSSDKS 255
Query: 310 VKLWELSSARCL 321
VK+W++S+ C+
Sbjct: 256 VKVWDVSARTCV 267
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
G +VL + +S D + S S D +K+WD + CV TF D ++ + + RNG
Sbjct: 230 GHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQD--QVWGVKYNRNGS 287
Query: 300 YLLSSGKDSLVKLWE 314
++S G D + +++
Sbjct: 288 KIVSVGDDQEIHVYD 302
Score = 70 (29.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 26/131 (19%), Positives = 57/131 (43%)
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186
++++G SVD S ++A SS+++ D + IR++ + +
Sbjct: 58 WALEGHQLGVVSVDVSPS----GNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVA 113
Query: 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246
F P + LA+GS V +F +K + F+ +++ P G Y+ G +
Sbjct: 114 FSPDSQHLATGSHVGKVNIFGVETG--KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 247 LRLYS-SDGRI 256
+ ++ + G++
Sbjct: 172 INIFDIATGKL 182
Score = 69 (29.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
H P R+ FS D QL T S D IKI DV
Sbjct: 189 HAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/69 (21%), Positives = 31/69 (44%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
+ + + P LASG+ D + +FD + + H + +R L+F +V
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSTDSQLLVTA 208
Query: 242 TDHFVLRLY 250
+D +++Y
Sbjct: 209 SDDGYIKIY 217
Score = 55 (24.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 126 AFSIDGQLCATGSVDASIKILDV 148
A+S DG+ A+G++D I I D+
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDI 177
Score = 53 (23.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 125 GAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183
G S DG +L +GS+D +K+ K S E E Q +GH + V
Sbjct: 25 GKNSNDGSELVISGSLDDLVKVW-------KWSDERLEMQWALEGHQL---------GVV 68
Query: 184 CLEFHPSAPILASGSKDKTVKMFDY-SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242
++ PS I+AS S D ++++D S +R ++ V +F P ++ G+
Sbjct: 69 SVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSV---AFSPDSQHLATGS 125
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMES 159
AFS D Q ATGS + I V+ + S+++
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT 146
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 130 (50.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 529 FSPMDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGTQLLSSGSDGL 586
Query: 310 VKLWELSSARCL 321
VKLW + + C+
Sbjct: 587 VKLWTIKNNECV 598
Score = 103 (41.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
S + D I++W C+A + AH A ++SL F+ +G +LSSG+D + +W+L S
Sbjct: 170 SSATDAAIRVWSLQDRSCLAVLT-AHYSA-VTSLAFSADGHTMLSSGRDKICIIWDLQSC 227
Query: 319 R 319
+
Sbjct: 228 Q 228
Score = 59 (25.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F P++ +LA+G D V+++D + H V ++FHP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHY--GTHHFRGSPGVVHLVAFHP 161
Score = 56 (24.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H +P AF L ATG D ++++ D+ R
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVR 140
Score = 42 (19.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
A +T+H S + AFS DG + D I D+
Sbjct: 189 AVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDL 224
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKI 145
H + A + + +L ATGS D + K+
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKL 505
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +S++ C TG S++I + ++ S S D + ++RTL
Sbjct: 43 CRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLL 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS D +K++D + +K+ ++ VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA--VRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLYS-SDGRI 256
++ D ++L+ + G++
Sbjct: 161 WLASAADDHTVKLWDLTAGKV 181
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D DIK+WD C+ + K+H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + +TG
Sbjct: 175 DLTAGKVMFEFTG 187
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V +EFHPS +LASGS D+T++ +D K V + +E+T VRC+ F+P G
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIE--EEATPVRCILFNPDGCC 245
Query: 238 MVVGTDHFVLRLY 250
+ G LR+Y
Sbjct: 246 LYGGFQDS-LRVY 257
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
HK+ + F G A+GS+D IK+ DV R
Sbjct: 104 HKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H +P + S +L GS SI++ D++
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 131 GQLCATGSVDASIKILDVDR 150
G+L ATG D + + V++
Sbjct: 33 GRLLATGGDDCRVNVWSVNK 52
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +S++ C TG S++I + ++ S S D + ++RTL
Sbjct: 43 CRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLL 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS D +K++D + +K+ ++ VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA--VRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLYS-SDGRI 256
++ D ++L+ + G++
Sbjct: 161 WLASAADDHTVKLWDLTAGKV 181
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D DIK+WD C+ + K+H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + +TG
Sbjct: 175 DLTAGKVMFEFTG 187
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H +P + S +L GS SI++ D++
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 131 GQLCATGSVDASIKILDVDR 150
G+L ATG D + + V++
Sbjct: 33 GRLLATGGDDCRVNVWSVNK 52
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +S++ C TG S++I + ++ S S D + ++RTL
Sbjct: 43 CRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLL 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS D +K++D + +K+ ++ VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA--VRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLYS-SDGRI 256
++ D ++L+ + G++
Sbjct: 161 WLASAADDHTVKLWDLTAGKV 181
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D DIK+WD C+ + K+H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + +TG
Sbjct: 175 DLTAGKVMFEFTG 187
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H +P + S +L GS SI++ D++
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 131 GQLCATGSVDASIKILDVDR 150
G+L ATG D + + V++
Sbjct: 33 GRLLATGGDDCRVNVWSVNK 52
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 119 (46.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS D +++W V F+ H G + SL F+ NGKYL S+G+D +KLW+L+S
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFT-GHRGP-VLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 98 (39.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
VL L +S +G+ S +D +K+WD ++S + + H I+SLTF+ + + S+
Sbjct: 471 VLSLAFSPNGKYLASAGEDQRLKLWD-LASGTLYKELRGHTD-NITSLTFSPDSGLIASA 528
Query: 305 GKDSLVKLWELSSARCLIAYTGAGS 329
D+ V++W++ + C G+ S
Sbjct: 529 SMDNSVRVWDIRNTYCSAPADGSSS 553
Score = 90 (36.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 175 LYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
LY H V L+ P + ASGS D+T +++ + ++ + + V C+ FHP
Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAG--HLADVDCVKFHP 436
Query: 234 CGDYMVVGTDHFVLRLYSS 252
+Y+ G+ +RL+S+
Sbjct: 437 NSNYLATGSTDKTVRLWSA 455
Score = 60 (26.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 65/278 (23%), Positives = 107/278 (38%)
Query: 13 VLRRQEALYRLIISQLYYDGHHPMAITLQSSCNV-VEPCPPSDRLSQLVHIGLAHEPDRM 71
V+R QE Y +I L D + + L ++ V+P +D QL G + +
Sbjct: 164 VVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDY--QLYASGSSSRSEN- 220
Query: 72 KRMEPSIGLNPIQEILIGPGLDLEFES-----DVDPSAPEPAQYETAYVTSHKSPCRAGA 126
+EP +PI + L++ ES D PS Y A+ + +
Sbjct: 221 NGLEPPDMPSPILQN--EAALEVLQESIKRVKDGPPSLTTICFY--AFYNTEQL-LNTAE 275
Query: 127 FSIDGQLCATGSVDASIKI--------------LDVDRM-LAKSSMESSEPQNDQQGHPV 171
S D +L A G ++ IK+ +DV R+ LA +E + ++D G +
Sbjct: 276 ISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEM 335
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
+ L H V F + L S S+D +++ +D + ++ + V L
Sbjct: 336 -KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQG--HAYPVWDLDI 392
Query: 232 HPCGDYMVVGTDHFVLRLYSSDG----RIYCSGSKDGD 265
P Y G+ RL+S D RIY D D
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD 430
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 147 (56.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST 224
D + TL H V C+ H S + SGS+D T++++D + S H +
Sbjct: 1061 DMDSGACVHTLQGHTSTVRCMHLHGSKVV--SGSRDATLRVWDIEQGSC--LHVLVGHLA 1116
Query: 225 FVRCLSFHP----CG--DYMV----------VGT-DHFVLRLYSS--DGRIYCSGSKDGD 265
VRC+ + G DYMV + T R+YS DG SGS D
Sbjct: 1117 AVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTS 1176
Query: 266 IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325
I++WD + C T H S + +N L+S DS VK+W++++ +CL +
Sbjct: 1177 IRVWDVETGNCKHTLM-GHQSLT-SGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLS 1232
Query: 326 G 326
G
Sbjct: 1233 G 1233
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 49/185 (26%), Positives = 81/185 (43%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCLS 230
+RTL H V + S I+ SGS D+T+K++D + H T+Q T VRC+
Sbjct: 1028 LRTLVGHTGGVWSSQM--SGNIIISGSTDRTLKVWDMDSGAC--VH-TLQGHTSTVRCMH 1082
Query: 231 FHPC------------------GDYMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDG 271
H G + V H +R DG++ SG+ D +KIW
Sbjct: 1083 LHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHP 1142
Query: 272 VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331
+C+ T + H + SL F +G +++S D+ +++W++ + C G S+
Sbjct: 1143 ERQECLHTL-QGHTN-RVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLT 1198
Query: 332 QQFEL 336
EL
Sbjct: 1199 SGMEL 1203
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 243 DHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL 302
DH + L S RI SGS D +K+W V+ KC+ T H G SS +G ++
Sbjct: 995 DHVITCLQFSGNRIV-SGSDDNTLKVWSAVNGKCLRTLV-GHTGGVWSS---QMSGNIII 1049
Query: 303 SSGKDSLVKLWELSSARCLIAYTG 326
S D +K+W++ S C+ G
Sbjct: 1050 SGSTDRTLKVWDMDSGACVHTLQG 1073
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 129 IDGQLCATGSVDASIKILDVD 149
+ G + +GS D ++K+ D+D
Sbjct: 1043 MSGNIIISGSTDRTLKVWDMD 1063
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS D +++W V F+ H G + SL F+ NGKYL S+G+D +KLW+L+S
Sbjct: 461 TGSTDKTVRLWSAQQGNSVRLFT-GHRGP-VLSLAFSPNGKYLASAGEDQRLKLWDLAS 517
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
VL L +S +G+ S +D +K+WD ++S + + H I+SLTF+ + + S+
Sbjct: 489 VLSLAFSPNGKYLASAGEDQRLKLWD-LASGTLYKELRGHTD-NITSLTFSPDSSLIASA 546
Query: 305 GKDSLVKLWELSSARCLIAYTGAGSMGQ 332
D+ V++W++ + C + GS G+
Sbjct: 547 SMDNSVRVWDIRNTYC--STPADGSSGE 572
Score = 90 (36.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 175 LYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
LY H V L+ P + ASGS D+T +++ + ++ + + V C+ FHP
Sbjct: 397 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAG--HLADVDCVKFHP 454
Query: 234 CGDYMVVGTDHFVLRLYSS 252
+Y+ G+ +RL+S+
Sbjct: 455 NSNYLATGSTDKTVRLWSA 473
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/125 (24%), Positives = 51/125 (40%)
Query: 146 LDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204
+DV R+ LA +E + ++D G + + L H V F + L S S+D +++
Sbjct: 327 VDVSRIHLACDILEEEDDEDDNAGTEM-KILRGHCGPVYSTRFLADSSGLLSCSEDMSIR 385
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG----RIYCSG 260
+D + ++ + V L P Y G+ RL+S D RIY
Sbjct: 386 YWDLGSFTNTVLYQG--HAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGH 443
Query: 261 SKDGD 265
D D
Sbjct: 444 LADVD 448
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 127 (49.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 195
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
NG + S+G D VK+W++ + L Y
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Score = 115 (45.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+P+ +AS D TVK++D
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR 216
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDIK 267
+ + + ++ S V C+SFHP G+Y++ + L++ +GR IY G +
Sbjct: 217 VNKLLQHYQV--HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 268 IWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYL 301
VS SK FS GA+ L + N YL
Sbjct: 275 T---VSFSKGGELFSSG--GADTQVLLWRTNFDYL 304
Score = 100 (40.3 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
+ LA +S + S + + +LY H V C +F P ++ S S+DKT+K++D +
Sbjct: 115 QFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 210 -KSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFV 246
K V ++ + FV F+P G + G+DH V
Sbjct: 175 NKQCVNNFSDSVGFANFV---DFNPNGTCIASAGSDHTV 210
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 26/100 (26%), Positives = 51/100 (51%)
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
VG +FV ++ +G S D +KIWD +K + + + H G ++ ++F +G
Sbjct: 186 VGFANFVD--FNPNGTCIASAGSDHTVKIWDIRVNKLLQHY-QVHSGG-VNCVSFHPSGN 241
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339
Y++++ D +K+ +L R + YT G G F ++ +
Sbjct: 242 YIITASSDGTLKILDLLEGRLI--YTLQGHTGPVFTVSFS 279
Score = 82 (33.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D + + + T + H G + +++F++ G+ S G D+
Sbjct: 236 FHPSGNYIITASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFSSGGADTQ 293
Query: 310 VKLW 313
V LW
Sbjct: 294 VLLW 297
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 167 QGHPVIRTLYD-HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF 225
Q PV+ + H +T ++F PS LA+ S D + +++ K R A + +
Sbjct: 5 QEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWN-CKPQAR-AFRYVGHKDV 62
Query: 226 VRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255
V + F P G+ + + +RL+ D R
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKR 92
Score = 52 (23.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 26/85 (30%), Positives = 35/85 (41%)
Query: 68 PD-RMKRMEPSIGLNPIQEI-LIGPGLDLEFESDVDPSAPEPAQYETAYVTS---HKSPC 122
PD R K E P++ + G L S+ D S Y ++ S H
Sbjct: 89 PDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE-DKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 123 RAGAFSIDGQLCATGSVDASIKILD 147
R FS DG+L + S D +IKI D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKI 145
Y HK+ + FS G+ AT S D + +
Sbjct: 13 YFKGHKAAITSVDFSPSGKQLATASWDTFLML 44
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308
++SSDGR++ S S D ++ W S KC T + AH + + +++F+ +G++LLS G D+
Sbjct: 71 VFSSDGRLFASASHDCSVRTWCNSSLKCTHTLT-AHRRS-VETVSFSPDGQWLLSGGWDN 128
Query: 309 LVKLWELSSARCL 321
+W + S L
Sbjct: 129 RALIWSIQSGALL 141
Score = 42 (19.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-VRCLS 230
IR H EV C F P +L + K++ + K+S K ++ T V+C
Sbjct: 15 IRYFSRHKAEVNCCAFSPDCQLLLTCCD--AGKLYLW-KTSTAKLLASVSGHTGPVKCCV 71
Query: 231 FHPCG 235
F G
Sbjct: 72 FSSDG 76
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 106 (42.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D +++ SG+ D K+WD C TFS H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDFKLFISGACDATAKLWDVREGTCRQTFS-GHE-SDINAICFFPNGEAICTGSDDATC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + LI Y+
Sbjct: 251 RLFDLRADQELIVYS 265
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + ++ V S HD +S L T +G + + DS
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDSLKAERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 82 (33.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQND-QQGHPVIRTLY-DHI 179
R G + +L A TG + + LD D + SS +++ D + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLD-DNSIVTSSGDTTCALWDIETGQQ--KTVFLGHT 184
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV 239
+ L P + SG+ D T K++D + + R+ ES + + F P G+ +
Sbjct: 185 GDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSG-HESD-INAICFFPNGEAIC 242
Query: 240 VGTDHFVLRLY 250
G+D RL+
Sbjct: 243 TGSDDATCRLF 253
Score = 75 (31.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
+G C+GS D +++D + + + +S I+S+ F+R+G+ LL+ D +
Sbjct: 237 NGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNI 296
Query: 313 WE 314
W+
Sbjct: 297 WD 298
Score = 74 (31.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/90 (22%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWSTDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+++ G D+ + L + +G + S
Sbjct: 107 PSGNFVACGGLDNMCSIYNLKTREGNVKVS 136
>POMBASE|SPBC31F10.13c [details] [associations]
symbol:hip1 "hira protein, histone chaperone Hip1"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000417 "HIR
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=TAS]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0007070 "negative regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC31F10.13c GO:GO:0005829 GO:GO:0007346 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 GO:GO:0006351
GenomeReviews:CU329671_GR GO:GO:0003682 GO:GO:0016568 GO:GO:0030466
GO:GO:0000790 GO:GO:0030702 GO:GO:0000070 GO:GO:0006995
GO:GO:0006336 GO:GO:0007070 HOGENOM:HOG000208205 KO:K11293
OrthoDB:EOG4QRMC9 EMBL:AB027992 PIR:T40216 RefSeq:NP_596575.1
ProteinModelPortal:P87314 IntAct:P87314 STRING:P87314
EnsemblFungi:SPBC31F10.13c.1 GeneID:2540219 KEGG:spo:SPBC31F10.13c
OMA:CWIQAIT NextBio:20801351 GO:GO:0000417 Uniprot:P87314
Length = 932
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/202 (25%), Positives = 92/202 (45%)
Query: 123 RAGAFSI----DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYD 177
R FSI DG ATG +D +I+I + + +E +N+ + P + +
Sbjct: 18 RLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAI-----NRENENENENEDLPKQLCCMST 72
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCG 235
H VT + F P+ LASGS D+ V ++ + + ++ T E S+
Sbjct: 73 HTGTVTSVRFSPNGQYLASGSDDRVVIIW-HKEEAIPGLGSTFGSGEKHTENWRSYR--- 128
Query: 236 DYMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
++G D+ + L +S D ++ S D I +W+G + + + +AH + + +TF
Sbjct: 129 --RLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRI-EAHQ-SHVKGITF 184
Query: 295 TRNGKYLLSSGKDSLVKLWELS 316
GKY + D +K+W +S
Sbjct: 185 DPAGKYFATESDDRTIKVWRVS 206
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +SI+ C TG S+++ + ++ S S D + ++RTL
Sbjct: 43 CRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H + L+FHP +ASGS+D +K++D + ++ S VRCL F P G
Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ D ++L+
Sbjct: 161 WLASAADDHTVKLW 174
Score = 124 (48.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS+D +IK+WD CV + + H A + L F+ +GK+L S+ D VKLW
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQA-VRCLRFSPDGKWLASAADDHTVKLW 174
Query: 314 ELSSARCLIAYTG 326
+L++ + + + G
Sbjct: 175 DLTAGKMMSEFPG 187
Score = 50 (22.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H SP + + +L GS SI++ D++
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/194 (26%), Positives = 95/194 (48%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASI---KILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
H FS +G++ A+G DA I K+ D + + E Q +++ V++T
Sbjct: 65 HTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQVAFQDEDEAQLNKENWTVVKT 124
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H+E+V + + ++AS S D T M+D SK +K + ++V+ +++ P
Sbjct: 125 LRGHLEDVYDICWATDGNLMASASVDNTAIMWDVSKG--QKISIFNEHKSYVQGVTWDPL 182
Query: 235 GDYMVVGTDHFVLRLYSSDG-RIYCSGSKDGDIKIWDGVSSKCVA-TFSKAHDGAEIS-- 290
G Y+ + +LR+YS+ R+ + SK + GV ++ A ++ HD + S
Sbjct: 183 GQYVATLSCDRILRVYSTQKKRVAFNVSK-----MLSGVGAEGEARSYRMFHDDSMKSFF 237
Query: 291 -SLTFTRNGKYLLS 303
L+FT +G LL+
Sbjct: 238 RRLSFTPDGSLLLT 251
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/159 (25%), Positives = 69/159 (43%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ K V H + + + +
Sbjct: 405 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM-KQEVC-IHDLQAHNKEIYTIKW 462
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G + +L S S D +++WD C T +K + + S
Sbjct: 463 SPTGPATSNPNSNIML----------ASASFDSTVRLWDIERGVCTHTLTKHQE--PVYS 510
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +GKYL S D V +W S + +Y G G +
Sbjct: 511 VAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGI 549
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/212 (23%), Positives = 98/212 (46%)
Query: 103 SAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
+A A T+ SH++P + +++G+ SV+ K +++D + + SS+
Sbjct: 169 TAAATAATTTSAGVSHQNPSKNREATVNGEENRAHSVNNHAKPMEID---GEVEIPSSKA 225
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQE 222
V+R H EV ++P + +LASGS D T ++++ +++S + + +
Sbjct: 226 T-------VLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR 275
Query: 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
C+ G + V ++++G + +GS DG +IW +T +
Sbjct: 276 ----HCIRE---GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTE-DGNLASTLGQ 327
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
H G I +L + R G Y+LS+G D +W+
Sbjct: 328 -HKGP-IFALKWNRKGNYILSAGVDKTTIIWD 357
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 93 (37.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 242 TDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301
T V ++ + +GS D K+WD S + V+T + H AEI SL F G L
Sbjct: 177 TAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHF-AEIISLCFNTTGDRL 234
Query: 302 LSSGKDSLVKLWELSSARCLIAYTG 326
++ D LW++ S R + +G
Sbjct: 235 VTGSFDHTAILWDVPSGRKVHVLSG 259
Score = 90 (36.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQE 222
Q D++ + R L HI +T + F+ S +GS D+T K++D +S + H
Sbjct: 76 QKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD--TASGEELHTLEGH 133
Query: 223 STFVRCLSFH-PCGDYMVVGTDHFVLRLYSSD-GRIY 257
V ++F+ P GD + G+ +L+S++ G+ +
Sbjct: 134 RNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCF 170
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 118 (46.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 236 DYMVVGTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
+Y + F+L + YS DG+ SG+ DG I I+D + K + T + H I SLTF
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGH-AMPIRSLTF 198
Query: 295 TRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
+ + + L+++ D +K++E+ A +G GS
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGS 233
Score = 103 (41.3 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S D ++ + S DG IKI++ + AT S H G+ + ++ F+ + + +SS D
Sbjct: 198 FSPDSQLLVTASDDGYIKIYEVQHASLAATLS-GH-GSWVLNVAFSPDDTHFVSSSSDKS 255
Query: 310 VKLWELSSARCL 321
VK+W++S+ C+
Sbjct: 256 VKVWDVSARTCV 267
Score = 89 (36.4 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
G +VL + +S D + S S D +K+WD + CV TF D ++ + + +NG
Sbjct: 230 GHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQD--QVWGVKYNKNGS 287
Query: 300 YLLSSGKDSLVKLWE 314
++S D + +++
Sbjct: 288 KIVSVADDQEIHVYD 302
Score = 70 (29.7 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
+ + + P LASG+ D + +FD + + H + +R L+F P +V
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 242 TDHFVLRLY 250
+D +++Y
Sbjct: 209 SDDGYIKIY 217
Score = 68 (29.0 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 26/130 (20%), Positives = 55/130 (42%)
Query: 128 SIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187
+++G SVD S ++A SS+++ D + IR + + + F
Sbjct: 59 TLEGHQLGVVSVDVSPS----GNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAF 114
Query: 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247
P + LA+GS V +F +K + F+ +++ P G Y+ G ++
Sbjct: 115 SPDSQHLATGSHVGKVNIFGVETG--KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 248 RLYS-SDGRI 256
++ + G++
Sbjct: 173 NIFDIATGKL 182
Score = 57 (25.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 125 GAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183
G S DG +L +GS+D +K+ K S E E Q+ +GH + V
Sbjct: 25 GKNSNDGSELVISGSLDDLVKVW-------KWSDERLELQSTLEGHQL---------GVV 68
Query: 184 CLEFHPSAPILASGSKDKTVKMFD 207
++ PS I+AS S D ++++D
Sbjct: 69 SVDVSPSGNIMASSSLDAHIRLWD 92
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 126 AFSIDGQLCATGSVDASIKILDV 148
A+S DG+ A+G++D I I D+
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDI 177
Score = 44 (20.5 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMES 159
AFS D Q ATGS + I V+ + S+++
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT 146
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S DGR + S S D IK+WDG S K + F + H GA + + ++ + +YL+S KDS
Sbjct: 402 FSPDGRYFASASFDKSIKLWDGQSGKFLGNF-RGHVGA-VYQVCWSSDSRYLVSGSKDST 459
Query: 310 VKLWELSSAR 319
+K+W++ + +
Sbjct: 460 LKIWDIKTKK 469
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 152 LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS 211
LA SS +S+ D + + +L H VTCL++ ++ SGS+D+TV++F+ +
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDG 303
Query: 212 S-VR----KAH--KTIQEST-FV-RCLSFHPCG-DYMVVG-TDHFVLRLYS-----SDG- 254
VR AH T+ +T +V R S+ G +Y + L Y+ S G
Sbjct: 304 RLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGM 363
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
I SGS D + +W+ +K + H I+ ++F+ +G+Y S+ D +KLW+
Sbjct: 364 EILISGSDDFTVIMWNPSVTKTSISRLTGHQQL-INLVSFSPDGRYFASASFDKSIKLWD 422
Query: 315 LSSARCLIAYTG-AGSMGQ 332
S + L + G G++ Q
Sbjct: 423 GQSGKFLGNFRGHVGAVYQ 441
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+SSD R SGSKD +KIWD + +K + H E+ ++ ++ +G + S KD L
Sbjct: 444 WSSDSRYLVSGSKDSTLKIWD-IKTKKMEKELPGH-ADEVYTVDWSPDGDRVASGSKDRL 501
Query: 310 VKLW 313
+++W
Sbjct: 502 LRIW 505
Score = 59 (25.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147
P + + +T H+ +FS DG+ A+ S D SIK+ D
Sbjct: 380 PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD 422
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 103 (41.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHD-GAEISSLTFTRNGKYLLSS 304
L + D + S DG +K+W SS VA F+ +AHD G + + YL+++
Sbjct: 147 LAINPKDTNTFASSCLDGTVKVWSFGSS--VANFTLQAHDRGVNYVNYYPAGDKPYLITA 204
Query: 305 GKDSLVKLWELSSARCL 321
G D+L+K+W+ + C+
Sbjct: 205 GDDNLIKVWDYQTKACV 221
Score = 85 (35.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 20/79 (25%), Positives = 43/79 (54%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
R L H E V ++FHP+ P + + + V +++Y+ ++ ++ I + +R +F
Sbjct: 8 RKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFD-INDVP-IRACAFI 65
Query: 233 PCGDYMVVGTDHFVLRLYS 251
++ V G+D F +R+Y+
Sbjct: 66 ARKNWFVCGSDDFQVRVYN 84
Score = 74 (31.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHP 233
H + + L HP+ P L + S D T+K F++ S K +T + S +V L+ +P
Sbjct: 97 HPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSW--KCVQTFEGHSRYVMSLAINP 151
>UNIPROTKB|J9PAK6 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0006364 GO:GO:0032040 GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000048785 Uniprot:J9PAK6
Length = 346
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D LV
Sbjct: 72 SPDDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVVFVSRGTQLLSSGSDGLV 129
Query: 311 KLWELSSARCL 321
KLW + + C+
Sbjct: 130 KLWTIKNNECV 140
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 127 (49.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 529 FSPMDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGTQLLSSGSDGL 586
Query: 310 VKLWELSSARCL 321
+KLW + + C+
Sbjct: 587 LKLWTIKNNECV 598
Score = 110 (43.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 226 VRCLSFHPC-GDYMVVGTDHFVLRLYSSDGRIYC-SGSKDGDIKIWDGVSSKCVATFSKA 283
VRC H G VV H V + R+ S + D I++W C+A + A
Sbjct: 139 VRCYGTHHFRGSPGVV---HLVA-FHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT-A 193
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
H A ++SLTF+ +G +LSSG+D + +W+L S
Sbjct: 194 HYSA-VTSLTFSADGHTMLSSGRDKICVIWDLRS 226
Score = 59 (25.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F P++ +LA+G D V+++D + H V ++FHP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCY--GTHHFRGSPGVVHLVAFHP 161
Score = 57 (25.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H +P AF L ATG D ++++ DV R
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVR 140
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA 153
A +T+H S + FS DG + D I D+ + A
Sbjct: 189 AVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQA 229
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H + A + + +L ATGS D + K+ + R
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPR 510
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 127 (49.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S ++ + S DG IK+W C+ TF + HD A + + F G LLSSG D L
Sbjct: 529 FSPMDQVLATASADGTIKLWALQDFSCLKTF-EGHD-ASVLKVAFVSRGTQLLSSGSDGL 586
Query: 310 VKLWELSSARCL 321
+KLW + + C+
Sbjct: 587 LKLWTIKNNECV 598
Score = 110 (43.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 226 VRCLSFHPC-GDYMVVGTDHFVLRLYSSDGRIYC-SGSKDGDIKIWDGVSSKCVATFSKA 283
VRC H G VV H V + R+ S + D I++W C+A + A
Sbjct: 139 VRCYGTHHFRGSPGVV---HLVA-FHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT-A 193
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
H A ++SLTF+ +G +LSSG+D + +W+L S
Sbjct: 194 HYSA-VTSLTFSADGHTMLSSGRDKICVIWDLRS 226
Score = 59 (25.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
H V + F P++ +LA+G D V+++D + H V ++FHP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCY--GTHHFRGSPGVVHLVAFHP 161
Score = 57 (25.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H +P AF L ATG D ++++ DV R
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVR 140
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA 153
A +T+H S + FS DG + D I D+ + A
Sbjct: 189 AVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQA 229
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
H + A + + +L ATGS D + K+ + R
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPR 510
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 102 (41.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 251 SSDGRI---YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
SSD + S S DG +K+W+ S+ AT S AH G+ I+ F+++GKY+ + G+D
Sbjct: 2111 SSDAPVTLSIASSSDDGTVKLWEFNSA--TATTS-AHKGS-INQCVFSKDGKYVATCGQD 2166
Query: 308 SLVKLWE 314
++ +W+
Sbjct: 2167 CVLNIWD 2173
Score = 96 (38.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 32/129 (24%), Positives = 63/129 (48%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
AFS L A G+ D ++++ DV S+ E + L+ H +T +
Sbjct: 1790 AFSPTQPLLAVGATDCTVRLFDVS-----SNTIYRE----------VAKLHGHTRAITSI 1834
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF--VRCLSFHPCGDYMVVG-T 242
F PS ++AS S+D +K+++ KA TI+++ + C+SF+P + ++ +
Sbjct: 1835 TFSPSGNLIASTSEDLLIKVWNVQ---THKAEYTIEKAHNDPINCISFNPTNECELISCS 1891
Query: 243 DHFVLRLYS 251
D + +++S
Sbjct: 1892 DDYSTKVWS 1900
Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ D + S S DG +K+WD + + +++ S + +G+ + SS D +
Sbjct: 2006 FTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSS-DASGR-IFSSSDDGI 2063
Query: 310 VKLWELSSARCLIAYTG-AGSMGQ-QF 334
+K W + CL TG +G + Q QF
Sbjct: 2064 IKSWYPVAGSCLATLTGHSGPIKQVQF 2090
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 251 SSD--GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297
SSD GRI+ S S DG IK W V+ C+AT + H G I + F N
Sbjct: 2048 SSDASGRIF-SSSDDGIIKSWYPVAGSCLATLT-GHSGP-IKQVQFNPN 2093
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSMGQ 332
+ SS D VKLWE +SA + GS+ Q
Sbjct: 2120 IASSSDDGTVKLWEFNSATATTS-AHKGSINQ 2150
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 102 (41.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D +++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDYKLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + L AY+
Sbjct: 251 RLFDLRADQELTAYS 265
Score = 85 (35.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWDSLKCERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 79 (32.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLY 250
G+D RL+
Sbjct: 244 GSDDASCRLF 253
Score = 76 (31.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+++ G D+ + L S +G + S
Sbjct: 107 PSGNFVACGGLDNMCSIYNLKSREGNVKVS 136
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 122 CRAGAFSIDGQLCA---TGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
CR +++ C TG A I+ + + S+ S D + ++RTL
Sbjct: 43 CRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLM 102
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H ++ L+FHP LASGS D +K++D + +K ++ VRCL+F P G
Sbjct: 103 GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA--VRCLAFSPDGK 160
Query: 237 YMVVGTDHFVLRLY 250
++ +D ++L+
Sbjct: 161 WLASASDDSTVKLW 174
Score = 129 (50.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
G SGS D +IK+WD CV + K H A + L F+ +GK+L S+ DS VKLW
Sbjct: 117 GEYLASGSVDSNIKLWDVRRKGCVFRY-KGHTQA-VRCLAFSPDGKWLASASDDSTVKLW 174
Query: 314 ELSSARCLIAYT 325
+L + + + +T
Sbjct: 175 DLIAGKMITEFT 186
Score = 125 (49.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
++ SS+ R+ +GS G +++WD ++K + T H A ISSL F G+YL S
Sbjct: 69 IQFNSSEERVV-AGSLSGSLRLWDLEAAKILRTLM-GHK-ASISSLDFHPMGEYLASGSV 125
Query: 307 DSLVKLWELSSARCLIAYTG 326
DS +KLW++ C+ Y G
Sbjct: 126 DSNIKLWDVRRKGCVFRYKG 145
Score = 121 (47.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
+ LA +S +S+ D +I H V ++FHP+ +LASGS D+TVK++D
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLE 219
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
K ++ + + E+ VR + F+P G + G+++ LR+Y
Sbjct: 220 KFNMIGSSEG--ETGVVRSVLFNPDGSCLYSGSEN-TLRVY 257
Score = 115 (45.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DS 308
+S DG+ S S D +K+WD ++ K + F+ +H A ++ + F N +YLL+SG D
Sbjct: 155 FSPDGKWLASASDDSTVKLWDLIAGKMITEFT-SHTSA-VNVVQFHPN-EYLLASGSADR 211
Query: 309 LVKLWEL 315
VKLW+L
Sbjct: 212 TVKLWDL 218
Score = 60 (26.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
HK+ + F G+ A+GSVD++IK+ DV R
Sbjct: 104 HKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Score = 50 (22.7 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 172 IRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
++ + H V+ L S+ +LA+G +D V ++ SK + + ++ V C+
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMS--LTGHTSAVGCIQ 70
Query: 231 FHPCGDYMVVGTDHFVLRLY 250
F+ + +V G+ LRL+
Sbjct: 71 FNSSEERVVAGSLSGSLRLW 90
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD 149
+T H S F+ + GS+ S+++ D++
Sbjct: 59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Score = 37 (18.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 131 GQLCATGSVDASIKILDVDR 150
G+L ATG D + I V +
Sbjct: 33 GRLLATGGEDCRVNIWAVSK 52
>TAIR|locus:2049582 [details] [associations]
symbol:STL2P "AT2G01470" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=RCA;TAS] [GO:0043090 "amino acid import"
evidence=RCA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005794 GO:GO:0005774
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 GO:GO:0030176
GO:GO:0006888 EMBL:AC005560 KO:K14003 eggNOG:NOG309181 EMBL:M95796
EMBL:AY065198 EMBL:AY074332 EMBL:AY123030 IPI:IPI00534887
PIR:B84425 PIR:S28604 PIR:T48907 RefSeq:NP_178256.1 UniGene:At.323
ProteinModelPortal:Q39221 SMR:Q39221 STRING:Q39221 PaxDb:Q39221
PRIDE:Q39221 EnsemblPlants:AT2G01470.1 GeneID:814675
KEGG:ath:AT2G01470 GeneFarm:5183 TAIR:At2g01470
HOGENOM:HOG000070543 InParanoid:Q39221 OMA:WLPLAHI PhylomeDB:Q39221
ProtClustDB:CLSN2683533 Genevestigator:Q39221 GermOnline:AT2G01470
Uniprot:Q39221
Length = 393
Score = 93 (37.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 159 SSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHK 218
S E + VI+ L D + + L F+P +LA+G++D T+++F + S+
Sbjct: 134 SREDNQAGESEEVIKELRD-VGQQLALAFNPEGSVLAAGAEDGTLRVFKWP--SMNTLLN 190
Query: 219 TIQESTFVRCLSFHPCGDYMV 239
Q + V+CL+F G ++V
Sbjct: 191 ESQAHSSVKCLTFSESGQFLV 211
Score = 87 (35.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S+DG++ G+ +GD+ I + + + KAH G +++LTF+ + + L+S DS
Sbjct: 294 SADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGL-VTALTFSPDSRGLVSVSFDSRA 352
Query: 311 KL 312
+L
Sbjct: 353 RL 354
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 98 (39.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
DGR + SG+ D IK+WD S C TF H+ ++I+++ F NG Y ++G D
Sbjct: 195 DGRTFVSGACDASIKLWDVRDSMCRQTFI-GHE-SDINAVAFFPNG-YAFTTGSD 246
Score = 83 (34.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + F+ H G ++ SL+ +G+ +S D+
Sbjct: 151 FLDDNQIITS-SGDTTCALWDIETGQQTVGFA-GHSG-DVMSLSLAPDGRTFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
+KLW++ + C + G
Sbjct: 208 IKLWDVRDSMCRQTFIG 224
Score = 75 (31.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+++ G + +YS
Sbjct: 107 PSGNFVACGGLDNICSIYS 125
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 102 (41.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D +++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDFKLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + L AY+
Sbjct: 251 RLFDLRADQELTAYS 265
Score = 86 (35.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNIWDSMKGERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKVW 339
Score = 79 (32.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLY 250
G+D RL+
Sbjct: 244 GSDDASCRLF 253
Score = 75 (31.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYSSDGR 255
P G+++ G + +YS R
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSR 129
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 102 (41.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D +++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDFKLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + L AY+
Sbjct: 251 RLFDLRADQELTAYS 265
Score = 86 (35.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + IWD + + V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNIWDSMKGERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKVW 339
Score = 79 (32.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLY 250
G+D RL+
Sbjct: 244 GSDDASCRLF 253
Score = 75 (31.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYSSDGR 255
P G+++ G + +YS R
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSR 129
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 102 (41.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D +++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDYKLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + L AY+
Sbjct: 251 RLFDLRADQELTAYS 265
Score = 86 (35.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWDSLKCERVGVLS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 79 (32.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLY 250
G+D RL+
Sbjct: 244 GSDDASCRLF 253
Score = 75 (31.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYSSDGR 255
P G+++ G + +YS R
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSR 129
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 114 (45.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+GS D +++W V F+ H G + +L F+ NGKYL S+G+D +KLW+L+S
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFT-GHRGP-VLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 99 (39.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 246 VLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304
VL L +S +G+ S +D +K+WD ++S + + H I+SLTF+ + + S+
Sbjct: 471 VLALAFSPNGKYLASAGEDQRLKLWD-LASGTLYKELRGHTD-NITSLTFSPDSSLIASA 528
Query: 305 GKDSLVKLWELSSARCLIAYTGAGS 329
D+ V++W++ + C G+ S
Sbjct: 529 SMDNSVRVWDIRNTYCNAPADGSSS 553
Score = 68 (29.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 61/263 (23%), Positives = 107/263 (40%)
Query: 13 VLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMK 72
V+R QE Y ++ L D ++ + L + ++ PS R ++ + +
Sbjct: 164 VIRLQEDSYNYLLRYLQSDNNNALCKVL--TLHIHLDVQPSKRTDYQLYASGSSSRNESN 221
Query: 73 RMEPS-IGLNPIQ-EILIGPGLD-LEFESDVDPSAPEP---AQYETAYV--TSHKSP-CR 123
+EPS + + +Q E + D ++ D PS A Y T + T+ SP +
Sbjct: 222 GLEPSEVPASILQNEAALELLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSK 281
Query: 124 AGAFSIDGQLCATGSVDAS-IK----ILDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYD 177
A D S+ + +K ++DV R+ LA ++ E ++D G + + L
Sbjct: 282 LLAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEM-KILRG 340
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI--QESTF-VRCLSFHPC 234
H V F + L S S+D +++ +D +R T+ Q + V L PC
Sbjct: 341 HCGPVYSTRFLSDSSGLLSCSEDMSIRYWD-----LRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 235 GDYMVVGTDHFVLRLYSSDGRIY 257
Y + RL+S D R Y
Sbjct: 396 SLYFASASHDRTARLWSFD-RTY 417
>ZFIN|ZDB-GENE-070424-67 [details] [associations]
symbol:wdr90 "WD repeat domain 90" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-070424-67
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR007714 Pfam:PF05018
GeneTree:ENSGT00620000087755 EMBL:CU571252 IPI:IPI01005114
Ensembl:ENSDART00000109221 Bgee:F1RA29 Uniprot:F1RA29
Length = 1843
Score = 112 (44.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 172 IRTLYDHI---EEVTC-LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR 227
++ LYD + +E C + FHPS P+ A GS V++FD SS+ H+ Q V
Sbjct: 777 LQQLYDFVTDDDENPCSVAFHPSMPLFACGSSSGAVRVFDIQTSSLIAQHR--QHCGSVE 834
Query: 228 CLSFHPCGDYMV-VGTDHFVLRLYSSDGR 255
C+ + P G + G+ + VL YSS R
Sbjct: 835 CVIYSPDGQCLFSAGSGYLVL--YSSSER 861
Score = 84 (34.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 244 HFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
H L + S+ G S I IW+ C + H+GA + SLTF+R+ YLLS
Sbjct: 1257 HDALTVASASGG---GASHSSLICIWNVQDGSCRHKLAY-HNGA-VQSLTFSRDDMYLLS 1311
Query: 304 SG--KDSLVKLWELSSARCL 321
G ++LV LW S L
Sbjct: 1312 VGDFSEALVALWSTRSFELL 1331
Score = 73 (30.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
Y++ +Y +G+ G + +WD + +C T+ D EI L G L++
Sbjct: 1396 YNTRNILY-TGTNSGHVCVWDCNTQRCFVTWEA--DRGEIGVLVCC--GNMLVTGSNTKK 1450
Query: 310 VKLWELSSARCL 321
++LW ++S + L
Sbjct: 1451 LRLWSVASVQSL 1462
Score = 65 (27.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S G + SG++DG I + V+ + T + H GA I++L T K G D
Sbjct: 1630 FSHYGDVLLSGARDGVITVCSPVTGVSIRTITD-HRGASINTLQCT--SKQFKEFGLDGN 1686
Query: 310 VKLWELSSA 318
+LW SA
Sbjct: 1687 -ELWLAVSA 1694
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 268 IW-DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
+W D + + + S+ H + SL + +G YLL++G++SL K+W+
Sbjct: 955 LWIDTHTGQLLRQVSEVHKH-QCESLAVSEDGHYLLTAGQNSL-KVWD 1000
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 126 AFSIDGQLCATGSVDASIKILDVD 149
+ S+ + C TGS D +++ +D
Sbjct: 669 SISVCAKFCVTGSEDGFMRLWPLD 692
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/172 (28%), Positives = 74/172 (43%)
Query: 146 LDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204
L D + + ++ S + Q P IR L H +TCL P + S +KD T+
Sbjct: 115 LKEDVLEQRGRLQKSVAKEIQAPAPADIRILRGHQLSITCLVITPDDLAIFSAAKDCTI- 173
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264
+S S RK H I + + P G + H + SSDG+ SG +
Sbjct: 174 -IKWSVESGRKLH-VIPRAK--KGAEGQPPGH-----SSHILCMAISSDGKYLASGDRSK 224
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316
I IW+ S + + TF+ D +S L F R L S+ D VK+W ++
Sbjct: 225 LILIWEAQSCRHLYTFTGHRDA--VSGLAFRRGTHQLYSTSHDRSVKVWNVA 274
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 40/159 (25%), Positives = 69/159 (43%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
++T H EV +++ PS +LAS S D T+K++ K V H + + + +
Sbjct: 397 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM-KQEVC-IHDLQAHNKEIYTIKW 454
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
P G + +L S S D +++WD C T +K + + S
Sbjct: 455 SPTGPATSNPNSNIML----------ASASFDSTVRLWDIERGVCTHTLTKHQE--PVYS 502
Query: 292 LTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
+ F+ +G+YL S D V +W S + +Y G G +
Sbjct: 503 VAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRGTGGI 541
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 103 SAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP 162
+A A T+ S ++P + +++G+ SV+ K +++D + + SS+
Sbjct: 161 AAAAAAAATTSASVSQQNPSKNREATVNGEENRAHSVNNHAKPMEID---GEVDIPSSKA 217
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQE 222
V+R H EV ++P + +LASGS D T ++++ +++S + + +
Sbjct: 218 T-------VLR---GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLR 267
Query: 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
C+ G + V ++++G + +GS DG +IW +T +
Sbjct: 268 ----HCIRE---GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTE-DGNLASTLGQ 319
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
H G I +L + R G Y+LS+G D +W+
Sbjct: 320 -HKGP-IFALKWNRKGNYILSAGVDKTTIIWD 349
>UNIPROTKB|F1RGE2 [details] [associations]
symbol:LOC100738153 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR012916 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07808 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR012492 Pfam:PF07807
ProDom:PD311621 GeneTree:ENSGT00630000089902 EMBL:CU459055
Ensembl:ENSSSCT00000015702 OMA:ANTIAFH Uniprot:F1RGE2
Length = 873
Score = 105 (42.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 242 TDHFVLRLYSSDGRI------YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+D F LR S D + C+GS DG I+ + ++ V + + H G + L +
Sbjct: 735 SDRFALRAESIDCMVPVTESLLCAGSTDGVIRAVHILPNRVVGSVGQ-HAGEPVEKLALS 793
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLI 322
G++L SSG D +K W+++ R ++
Sbjct: 794 HCGRFLASSGHDQRLKFWDMAQLRAVV 820
Score = 82 (33.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 37/123 (30%), Positives = 46/123 (37%)
Query: 52 PSDRLSQLVHIGLAHEPDRMKRMEPSIGLN-PIQEILIGPGLDLEFESDVDP-------S 103
P+D +S P R++ I L P + P DL DVD S
Sbjct: 498 PTDEVSDEEDPDSTEAPARIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFRYS 557
Query: 104 APEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVD--RMLAKSSMESSE 161
E E H CRA FS DGQ T S D +I LDV+ R+ + S
Sbjct: 558 CQEGDTKELWSSGHHLKSCRAVVFSEDGQKLVTVSKDKAIHFLDVEQGRLERRISKAHGA 617
Query: 162 PQN 164
P N
Sbjct: 618 PIN 620
Score = 69 (29.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 133 LCATGSVDA--SIKILD-VDRMLAKSSME--SSEPQNDQQGHPV-IR-TLYDHIEEVTC- 184
L GS+D+ + +IL +DR + + S E D P IR T D + E
Sbjct: 472 LVVVGSLDSCCAARILRFMDRTCEEKPTDEVSDEEDPDSTEAPARIRDTPEDIVLEAPAS 531
Query: 185 -LEFHPSAPILASGSKDKTVKMFDYS--KSSVRKAHKTIQESTFVRCLSFHPCGDYMV-V 240
L FHP+ +LA+G D V +F YS + ++ + R + F G +V V
Sbjct: 532 GLAFHPARDLLAAGDVDGDVFVFRYSCQEGDTKELWSSGHHLKSCRAVVFSEDGQKLVTV 591
Query: 241 GTDHFVLRLYSSDGRI 256
D + L GR+
Sbjct: 592 SKDKAIHFLDVEQGRL 607
>MGI|MGI:1915333 [details] [associations]
symbol:Pak1ip1 "PAK1 interacting protein 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009968 "negative regulation
of signal transduction" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915333 GO:GO:0005886
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009968 GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
OMA:NDGFIKM ChiTaRS:PAK1IP1 EMBL:AY030406 EMBL:AF386076
EMBL:AK002852 EMBL:AK077941 EMBL:AK150747 EMBL:AK150919
EMBL:BC051498 IPI:IPI00120790 RefSeq:NP_080826.2 UniGene:Mm.24789
ProteinModelPortal:Q9DCE5 SMR:Q9DCE5 STRING:Q9DCE5
PhosphoSite:Q9DCE5 PaxDb:Q9DCE5 PRIDE:Q9DCE5
Ensembl:ENSMUST00000046951 GeneID:68083 KEGG:mmu:68083
UCSC:uc007qer.2 InParanoid:Q9DCE5 NextBio:326384 Bgee:Q9DCE5
CleanEx:MM_PAK1IP1 Genevestigator:Q9DCE5
GermOnline:ENSMUSG00000038683 Uniprot:Q9DCE5
Length = 382
Score = 113 (44.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318
SG++DG I IWD KC+ TF KAH G ++ L+ +GK LS G D ++ W L
Sbjct: 98 SGAEDGHICIWDVKRWKCLKTF-KAHRG-HVTFLSIHPSGKLALSVGTDKTLRTWNLIEG 155
Query: 319 R 319
R
Sbjct: 156 R 156
Score = 64 (27.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
T + H ++ L ++ + SGSKD+T+ ++D + A + + V CL FH
Sbjct: 37 THHSHTASLSVLA--SNSRYVVSGSKDETIHIYDMKRKVEHGA--LVHHAGTVTCLKFHG 92
Query: 234 CGDYMVVGTD 243
+++ G +
Sbjct: 93 -NQHLISGAE 101
Score = 40 (19.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM 157
T H + + + +GS D +I I D+ R + ++
Sbjct: 37 THHSHTASLSVLASNSRYVVSGSKDETIHIYDMKRKVEHGAL 78
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 98 (39.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDIREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMVYS 265
Score = 88 (36.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 85 (35.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFA-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDIREGMCRQTFTG 224
Score = 80 (33.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 236 DYMVVGTDHFVLRL----YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
+ MV D+ + + +S GR+ +G D + +WD + + + HD +S
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLA-GHDN-RVSC 317
Query: 292 LTFTRNGKYLLSSGKDSLVKLW 313
L T +G + + DS +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 79 (32.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYS 251
P G+Y+ G + +YS
Sbjct: 107 PSGNYVACGGLDNICSIYS 125
Score = 69 (29.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + +S HD I+S+ F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMVYS--HDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDTLKA 302
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 111 (44.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD V TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 223 LRQNK--LTYTMRGHADSVTGLSLS 245
Score = 102 (41.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 269 APKERCVKIFQG 280
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 157
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 158 CYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 251 SSDGRIYCSGSKDGDIKIWD----GVSSKCVATFS-KAHDGAE-ISSLTFTRNGKYLLSS 304
SS+G S + D +++WD +CV F H+ + + +++ +G + +
Sbjct: 245 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 304
Query: 305 GKDSLVKLWELSSARCLIAYTG-AGSMGQ 332
D V +W+ +S R L G AGS+ +
Sbjct: 305 SADRFVYVWDTTSRRVLYKLPGHAGSINE 333
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 184 KKA---AVQTFQNTYQVLAVTFNDTSDQIISG 212
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 46 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 95
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 160
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 161 ARRGPQLVCTGSDDGTVKLW 180
Score = 51 (23.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
T++V S P R G QL TGS D ++K+ D+ + A + +++
Sbjct: 152 TSFVNSCY-PARRGP-----QLVCTGSDDGTVKLWDIRKKAAVQTFQNT 194
Score = 42 (19.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVL 247
V C FHP G + G D +L
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLIL 92
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 138 (53.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 62/267 (23%), Positives = 109/267 (40%)
Query: 100 VDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES 159
+ S P Y T + T++ C F+ D L A G D+ IK+ +D KS ++
Sbjct: 445 IQASLPSVCMY-TFHNTNNNMTCIE--FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKR 501
Query: 160 SEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT 219
+ + R L H V + F P L S S+DKTV+++ + ++K
Sbjct: 502 DRHKPQEN----TRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKG 557
Query: 220 IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG----RIYCSGSKDGDIK-------- 267
+ + + F P G Y V + RL+++D RI+ D D
Sbjct: 558 HTQPVWD--VKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNY 615
Query: 268 IWDGVSSKCVATFSKAHDGA----------EISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
++ G S K + H G ++ L + +G++L S G+D ++ +W++ S
Sbjct: 616 VFTGSSDKTCRMWD-VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGS 674
Query: 318 ARCLIAYTGAGSMGQQFELTLTVDADV 344
R L + G + + L + D V
Sbjct: 675 GRRLKSMRGH-ARASLYSLAFSRDGTV 700
Score = 126 (49.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 51/214 (23%), Positives = 89/214 (41%)
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES-SEPQNDQQ 167
Q T + H P +FS D + + S D ++++ +D A S + ++P D +
Sbjct: 507 QENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVK 566
Query: 168 ----GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQES 223
GH + +D + + I A D V ++ +S +
Sbjct: 567 FSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHIND--VDCVEFHPNS-NYVFTGSSDK 623
Query: 224 TFVRCLSFHP--CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS 281
T R H C + T+ S DGR SG +DG I +WD S + + +
Sbjct: 624 T-CRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM- 681
Query: 282 KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
+ H A + SL F+R+G L+S D+ V++W++
Sbjct: 682 RGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 45 (20.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 2 SEQNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQ-SSCNVVEPCPP 52
S ++ Q S + Q L R+++ L G+H L+ S N+ P P
Sbjct: 62 SARSSQGRSNQPQYSQADLNRIVLEYLNKKGYHRTEAQLRLESSNIPTPAVP 113
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 245 FVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
F+L + YS DG+ SG+ DG I I+D + K + T + H I SLTF+ + + L++
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGH-AMPIRSLTFSPDSQLLVT 207
Query: 304 SGKDSLVKLWELSSARCLIAYTGAGS 329
+ D +K++++ A +G GS
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLSGHGS 233
Score = 106 (42.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S D ++ + S DG IKI+D + T S H G+ + S+ F+ + + +SS D
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-GH-GSWVLSVAFSPDDTHFVSSSSDKS 255
Query: 310 VKLWELSSARCL 321
+K+W+ SS C+
Sbjct: 256 IKVWDTSSRSCV 267
Score = 99 (39.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
G +VL + +S D + S S D IK+WD S CV TF D ++ S+ + G
Sbjct: 230 GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQD--QVWSVKYNPTGS 287
Query: 300 YLLSSGKDSLVKLWE 314
++S+G D + +++
Sbjct: 288 KIVSAGDDRAIHIYD 302
Score = 68 (29.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 23/116 (19%), Positives = 51/116 (43%)
Query: 142 SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201
S+ I + A SS+++ D + I+++ + + F P + +A+GS
Sbjct: 69 SVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG 128
Query: 202 TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-SDGRI 256
V +F S +K H F+ +++ P G Y+ G ++ ++ + G++
Sbjct: 129 KVNIFGVE--SGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Score = 67 (28.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
H P R+ FS D QL T S D IKI DV
Sbjct: 189 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 55 (24.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 126 AFSIDGQLCATGSVDASIKILDV 148
A+S DG+ A+G++D I I D+
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDI 177
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 128 SIDGQLCATGSVDASIKILDVDRMLAKSSMES 159
S +G + A+ S+DA I++ D++ SM++
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDA 104
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 97 (39.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG--HPVIRTL 175
H+ + + S DGQ ATGS D +K+ + + + E + + + G P I TL
Sbjct: 192 HERGVDSVSVSPDGQRFATGSWDTMLKVWSAE---LEDAGEGTSKRMKESGVRTPKI-TL 247
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
H E ++ +++ ++ +L +GS D T+K++D S + KA + +S F S+
Sbjct: 248 QGHRESISAVQWMDASTLL-TGSWDHTLKVWDLSLEGI-KAEISTNKSIFDA--SYSKLN 303
Query: 236 DYMVVGTDHFVLRLYSS 252
++ + LRLY S
Sbjct: 304 HLILTASADKNLRLYDS 320
Score = 82 (33.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
++ SGS D K+WD S K H G ++ + +T N KY++S G D+ V++++
Sbjct: 351 LFVSGSYDNQNKLWDCRSPKAPLYDLLGH-GEKVLDIDWT-NPKYIVSGGSDNTVRVFKS 408
Query: 316 SSA 318
A
Sbjct: 409 RKA 411
>UNIPROTKB|F1SGX1 [details] [associations]
symbol:CHAF1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:CU638724 ProteinModelPortal:F1SGX1 Ensembl:ENSSSCT00000013188
Uniprot:F1SGX1
Length = 559
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 51/194 (26%), Positives = 95/194 (48%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASI---KILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
H FS +G++ A+G DA I K+ D + + E Q +++ V++T
Sbjct: 65 HTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKT 124
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L H+E+V + + ++AS S D T ++D SK +K + ++V+ +++ P
Sbjct: 125 LRGHLEDVYDICWAADGNVMASASVDNTAIIWDVSKG--QKISIFNEHKSYVQGVTWDPL 182
Query: 235 GDYMVVGTDHFVLRLYSSDG-RIYCSGSKDGDIKIWDGVSSKCVA-TFSKAHDGAEIS-- 290
G Y+ + +LR+YS+ R+ + SK + GV ++ A ++ HD + S
Sbjct: 183 GQYVATLSCDRILRVYSTQKKRVAFNVSK-----MLSGVGAEGEARSYRMFHDDSMKSFF 237
Query: 291 -SLTFTRNGKYLLS 303
L+FT +G LL+
Sbjct: 238 RRLSFTPDGSLLLT 251
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMTYS 265
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFT-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + + HD +S L T +G + + DS
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/110 (21%), Positives = 44/110 (40%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V S+ + R+ + ++S D + +T H ++ + F P+ A
Sbjct: 184 TGDV-MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+GS D T ++FD + + +SF G ++ G D F
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + T+S HD I+S++F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMTYS 265
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFT-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + + HD +S L T +G + + DS
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/110 (21%), Positives = 44/110 (40%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V S+ + R+ + ++S D + +T H ++ + F P+ A
Sbjct: 184 TGDV-MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+GS D T ++FD + + +SF G ++ G D F
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + T+S HD I+S++F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMTYS 265
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFT-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + + HD +S L T +G + + DS
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/110 (21%), Positives = 44/110 (40%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V S+ + R+ + ++S D + +T H ++ + F P+ A
Sbjct: 184 TGDV-MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+GS D T ++FD + + +SF G ++ G D F
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + T+S HD I+S++F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMTYS 265
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFT-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + + HD +S L T +G + + DS
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/110 (21%), Positives = 44/110 (40%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V S+ + R+ + ++S D + +T H ++ + F P+ A
Sbjct: 184 TGDV-MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+GS D T ++FD + + +SF G ++ G D F
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + T+S HD I+S++F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMTYS 265
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFT-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + + HD +S L T +G + + DS
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/110 (21%), Positives = 44/110 (40%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195
TG V S+ + R+ + ++S D + +T H ++ + F P+ A
Sbjct: 184 TGDV-MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+GS D T ++FD + + +SF G ++ G D F
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + T+S HD I+S++F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 99 (39.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312
D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG + D+ +L
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRL 252
Query: 313 WELSSARCLIAYT 325
++L + + L+ Y+
Sbjct: 253 FDLRADQELMVYS 265
Score = 88 (36.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181
R G + +L TG + + LD D + SS +++ D + T H +
Sbjct: 129 REGNVRVSRELAGHTGYLSCC-RFLD-DNQIVTSSGDTTCALWDIETGQQTTTFAGHTGD 186
Query: 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
V L P + SG+ D + K++D + R+ T ES + + F P G+ G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INAICFFPNGNAFATG 244
Query: 242 TDHFVLRLY 250
+D RL+
Sbjct: 245 SDDATCRLF 253
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ D +I S S D +WD + + TF+ H G ++ SL+ + + +S D+
Sbjct: 151 FLDDNQIVTS-SGDTTCALWDIETGQQTTTFA-GHTG-DVMSLSLAPDTRLFVSGACDAS 207
Query: 310 VKLWELSSARCLIAYTG 326
KLW++ C +TG
Sbjct: 208 AKLWDVREGMCRQTFTG 224
Score = 82 (33.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 236 DYMVVGTDHFVLRL----YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
+ MV D+ + + +S GR+ +G D + +WD + + + HD +S
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSC 317
Query: 292 LTFTRNGKYLLSSGKDSLVKLW 313
L T +G + + DS +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDG--KLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+Y+ G D+ + L + +G + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVS 136
Score = 69 (29.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTRNGKYLLSSGKDSLV 310
+G + +GS D +++D + + + +S HD I+S+ F+++G+ LL+ D
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMVYS--HDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 311 KLWELSSA 318
+W+ A
Sbjct: 295 NVWDALKA 302
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 79/327 (24%), Positives = 140/327 (42%)
Query: 15 RRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRM 74
RRQE + ++ L++D + MA ++ V H+G A D R+
Sbjct: 226 RRQEVVADIVSKYLHFDTYEGMA---RNKLQCVATAGS--------HLGEAKRQDNKMRV 274
Query: 75 EPSIGLNPIQ-EILIGPGLDLEFESDVDPSAPE-PAQYETAY--VTSHKSPCRAGAFSID 130
+ L + + L P E E D DP AP+ P + + + S KS A SID
Sbjct: 275 YYGL-LKEVDFQTLTTPAPAPEEEDD-DPDAPDRPKKKKPKKDPLLSKKSKSDPNAPSID 332
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
+ S K+L + + L ++S + + DQ V T+ + + VTC E
Sbjct: 333 R--IPLPELKDSDKLLKL-KALREASKRLALSK-DQLPSAVFYTVLNSHQGVTCAEISDD 388
Query: 191 APILASGSKDKTVKMFDYSKSSVR--KAHKTIQE------STFVRCLSFHPCGDYM--VV 240
+ +LA G D +V+++ + + +R K +++E VR L G+ ++
Sbjct: 389 STMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRS-GEVTRSLM 447
Query: 241 GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
G V R ++ + + S S+D I++W ++ CV T+ + H + + F +G
Sbjct: 448 GHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY-RGHV-YPVWDVRFAPHGY 505
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTG 326
Y +S D +LW S + L + G
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVG 532
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 29/87 (33%), Positives = 52/87 (59%)
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD-YSKSSVRKAHKTIQESTFVRCLS 230
+R H+ +V C++FHP++ +A+GS D+TV+++D + SVR T + + V L+
Sbjct: 527 LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLM--TGHKGS-VSSLA 583
Query: 231 FHPCGDYMVVGT-DHFVLRLYSSDGRI 256
F CG Y+ G+ DH ++ S+G +
Sbjct: 584 FSACGRYLASGSVDHNIIIWDLSNGSL 610
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 222 LRQNK--LTYTMRGHADSVTGLSLS 244
Score = 102 (41.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 268 APKERCVKIFQG 279
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 99 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 156
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 157 CYPARRGPQLVCTGSDDGTVKLWDI 181
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 251 SSDGRIYCSGSKDGDIKIWD----GVSSKCVATFS-KAHDGAE-ISSLTFTRNGKYLLSS 304
SS+G S + D +++WD +CV F H+ + + +++ +G + +
Sbjct: 244 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 303
Query: 305 GKDSLVKLWELSSARCLIAYTG-AGSMGQ 332
D V +W+ +S R L G AGS+ +
Sbjct: 304 SADRFVYVWDTTSRRILYKLPGHAGSINE 332
Score = 72 (30.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 183 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 211
Score = 65 (27.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 45 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 94
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 159
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 160 ARRGPQLVCTGSDDGTVKLW 179
Score = 42 (19.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVL 247
V C FHP G + G D +L
Sbjct: 69 VYCCKFHPNGSTLASAGFDRLIL 91
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 137 (53.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
YSSDG+ +G +D +K+W+ SS C TFS+ G ++ + F+RN K+L+SS D
Sbjct: 401 YSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSG--VTGIQFSRNKKFLVSSSLDGT 458
Query: 310 VKLWELSSARCLIAYT 325
V+ ++++ R +T
Sbjct: 459 VRAFDVNRYRNFRTFT 474
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKM--FDYSKS 211
++VT L++ + +LA G +D + K+ +Y+K+
Sbjct: 146 DDVTWLDWSSDSRLLAIGCRDSSTKIVAINYTKN 179
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 127 FSIDGQLCATGSVDASIKILDVD 149
+S D +L A G D+S KI+ ++
Sbjct: 153 WSSDSRLLAIGCRDSSTKIVAIN 175
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 223 LRQNK--LTYTMRGHADSVTGLSLS 245
Score = 102 (41.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 269 APKERCVKIFQG 280
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 157
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 158 CYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 251 SSDGRIYCSGSKDGDIKIWD----GVSSKCVATFS-KAHDGAE-ISSLTFTRNGKYLLSS 304
SS+G S + D +++WD +CV F H+ + + +++ +G + +
Sbjct: 245 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 304
Query: 305 GKDSLVKLWELSSARCLIAYTG-AGSMGQ 332
D V +W+ +S R L G AGS+ +
Sbjct: 305 SADRFVYVWDTTSRRILYKLPGHAGSINE 333
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 184 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 212
Score = 65 (27.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 46 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 95
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 160
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 161 ARRGPQLVCTGSDDGTVKLW 180
Score = 42 (19.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVL 247
V C FHP G + G D +L
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLIL 92
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 223 LRQNK--LTYTMRGHADSVTGLSLS 245
Score = 102 (41.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 269 APKERCVRIFQG 280
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 157
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 158 CYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 251 SSDGRIYCSGSKDGDIKIWD----GVSSKCVATFS-KAHDGAE-ISSLTFTRNGKYLLSS 304
SS+G S + D +++WD +CV F H+ + + +++ +G + +
Sbjct: 245 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAG 304
Query: 305 GKDSLVKLWELSSARCLIAYTG-AGSMGQ 332
D V +W+ +S R L G AGS+ +
Sbjct: 305 SADRFVYVWDTTSRRILYKLPGHAGSINE 333
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 184 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 212
Score = 65 (27.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 46 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 95
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 160
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 161 ARRGPQLVCTGSDDGTVKLW 180
Score = 42 (19.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVL 247
V C FHP G + G D +L
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLIL 92
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 223 LRQNK--LTYTMRGHADSVTGLSLS 245
Score = 102 (41.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 269 APKERCVKIFQG 280
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 157
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 158 CYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 251 SSDGRIYCSGSKDGDIKIWD----GVSSKCVATFS-KAHDGAE-ISSLTFTRNGKYLLSS 304
SS+G S + D +++WD +CV F H+ + + +++ +G + +
Sbjct: 245 SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG 304
Query: 305 GKDSLVKLWELSSARCLIAYTG-AGSMGQ 332
D V +W+ +S R L G AGS+ +
Sbjct: 305 SADRFVYVWDTTSRRILYKLPGHAGSINE 333
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 184 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 212
Score = 65 (27.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 46 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 95
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 160
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 161 ARRGPQLVCTGSDDGTVKLW 180
Score = 42 (19.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVL 247
V C FHP G + G D +L
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLIL 92
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 102 (41.0 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S + + + S DG IKIW C+ T + H G+ + + +F G ++S + L
Sbjct: 577 FSPIDQCFLTCSADGTIKIWSLSDYTCLKTL-EGHKGSVLKA-SFISFGMQIVSVASEGL 634
Query: 310 VKLWELSSARCLIAYTG 326
+KLW + + CL + G
Sbjct: 635 IKLWNIKTNECLNTFEG 651
Score = 100 (40.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 19/55 (34%), Positives = 38/55 (69%)
Query: 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
D +I+++D V+ +CV + ++IS +TF+ +GK L+SSG+D ++ +W++ S
Sbjct: 191 DLNIRVYDLVTKECVILTNHL---SQISGITFSNSGKELISSGRDKVLNVWDMLS 242
Score = 84 (34.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210
++ S+++ + + + Q +++ H + ++ H S I+AS S DKTVK++D K
Sbjct: 103 LIGCSNLQIKQYRIEDQS--LVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEK 160
Query: 211 SSVRKAHKTIQESTFVRCLSFHP 233
H Q V L FHP
Sbjct: 161 GYC--THN-FQHDDVVTMLKFHP 180
Score = 56 (24.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQE 222
L +H+ +++ + F S L S +DK + ++D + +K QE
Sbjct: 207 LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTIPIYQE 254
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
H+ P G + A+ S D ++K+ D+++ + + + + HP + L
Sbjct: 128 HEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQHDDVVTMLKFHPTLLKL 185
>SGD|S000001744 [details] [associations]
symbol:CAF4 "WD40 repeat-containing protein associated with
the CCR4-NOT complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IPI] [GO:0030014 "CCR4-NOT complex" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IGI] [GO:0000266 "mitochondrial fission"
evidence=IMP;IPI] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000001744 GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006357 EMBL:BK006944
GO:GO:0016559 GO:GO:0030014 EMBL:Z28261 PIR:S38108
RefSeq:NP_012962.3 PDB:2PQR PDBsum:2PQR ProteinModelPortal:P36130
SMR:P36130 DIP:DIP-5945N IntAct:P36130 MINT:MINT-674079
STRING:P36130 PaxDb:P36130 PeptideAtlas:P36130 EnsemblFungi:YKR036C
GeneID:853908 KEGG:sce:YKR036C GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 EvolutionaryTrace:P36130
NextBio:975239 Genevestigator:P36130 GermOnline:YKR036C
GO:GO:0000266 InterPro:IPR021653 Pfam:PF11615 Uniprot:P36130
Length = 643
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 54/200 (27%), Positives = 92/200 (46%)
Query: 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGH---PVIRTLYDHIEEVTCLEFHPSAP 192
TGS DA++K+ D++ L++ P ++ P I H +E+T L F A
Sbjct: 380 TGSKDATLKLWDLN--LSREIYLDHSPLKEKTEEIVTPCIHNFELHKDEITALSFDSEA- 436
Query: 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF------VRCLSFHPCGDYMVVGTDHFV 246
L SGS+DK + +D + + I T R L+ C ++GT+ +
Sbjct: 437 -LVSGSRDKKIFHWDLTTGKCIQQLDLIFTPTHSDIKMPARSLNNGAC----LLGTEAPM 491
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306
+ +G+KDG +++WD K V DG I+SL F + + L++
Sbjct: 492 IGALQCYNSALATGTKDGIVRLWDLRVGKPVRLLEGHTDG--ITSLKF--DSEKLVTGSM 547
Query: 307 DSLVKLWELSSARCL--IAY 324
D+ V++W+L ++ L IAY
Sbjct: 548 DNSVRIWDLRTSSILDVIAY 567
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 95 (38.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKD--KTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
R L H +V C+ +HP ++ SGSKD + +K++D KS + A +ST V L
Sbjct: 265 RVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWD-PKSGIALATLHAHKST-VMDLK 322
Query: 231 FHPCGDYMVVGTDHFVLRLY 250
++ G+++V + +L+L+
Sbjct: 323 WNDNGNWLVTASRDHLLKLF 342
Score = 87 (35.7 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
++CSG DG I W+ + K + AHD + +L + G L S D +K W
Sbjct: 373 LFCSGGSDGSILFWNVGTDKEIGCVETAHDSI-VWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 43 (20.2 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150
+HK R +FS +GS D +++I D R
Sbjct: 227 AHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR 260
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 100 (40.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D R++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDFRLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAY 324
+L++L + + L Y
Sbjct: 251 RLFDLRADQELTTY 264
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + + V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWDSMKCERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 78 (32.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLY 250
G+D RL+
Sbjct: 244 GSDDASCRLF 253
Score = 75 (31.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDTYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVGTDHFVLRLYSSDGR 255
P G+++ G + +YS R
Sbjct: 107 PSGNFVACGGLDNMCSIYSLKSR 129
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 110 (43.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 223 LRQNK--LTYTMRGHADSVTGLSLS 245
Score = 102 (41.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 269 APKERCVKIFQG 280
Score = 94 (38.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 157
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 158 CYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 72 (30.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 184 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 212
Score = 64 (27.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206
+++ P+ P++ L H EV C +FHP+ LAS D+ + ++
Sbjct: 46 LQTGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW 94
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 160
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 161 ARRGPQLVCTGSDDGTVKLW 180
Score = 44 (20.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 226 VRCLSFHPCGDYMV-VGTDHFVLRLYSSDG 254
V C FHP G + G D +L L+S G
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLIL-LWSVYG 98
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 237 YMVVGTDHFV-LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
Y + H+V +S DGR+ S S+D IKIWD + +CV FS + A + F
Sbjct: 8 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF--VDFN 65
Query: 296 RNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+G + S+G D VK+W++ + L Y
Sbjct: 66 PSGTCIASAGSDQTVKVWDVRVNKLLQHY 94
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R++ S + + D + D + ++F+PS +AS D+TVK++D
Sbjct: 27 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 86
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS-DGR-IYCSGSKDGDI 266
+ + + ++ S V C+SFHP G+Y++ + L++ +GR IY G +
Sbjct: 87 VNKLLQHYQV--HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 143
Score = 92 (37.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLSFH 232
+LY H V C +F P ++ S S+DKT+K++D + K V ++ + FV F+
Sbjct: 9 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFN 65
Query: 233 PCGDYMV-VGTDHFV 246
P G + G+D V
Sbjct: 66 PSGTCIASAGSDQTV 80
Score = 83 (34.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+ G + S DG +KI D + + + T + H G + +++F++ G+ S G D+
Sbjct: 106 FHPSGNYLITASSDGTLKILDLLEGRLIYTL-QGHTGP-VFTVSFSKGGELFASGGADTQ 163
Query: 310 VKLW 313
V LW
Sbjct: 164 VLLW 167
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 99 (39.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S D S D +K+W+G K + T + H GA + F+ + + L+SS KD+
Sbjct: 413 FSPDMAYIASAGFDNHVKLWNGRDGKFITTL-RGHVGA-VYQCCFSADSRLLVSSSKDTT 470
Query: 310 VKLWELSSAR 319
+K+W + + +
Sbjct: 471 LKVWNVRTGK 480
Score = 89 (36.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S+D R+ S SKD +K+W+ + K D E+ ++ ++ +G+ + S GKD
Sbjct: 455 FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKD--EVFAVDWSPDGQKVGSGGKDKA 512
Query: 310 VKLW 313
+++W
Sbjct: 513 IRIW 516
Score = 83 (34.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 259 SGSKDGDIKIWDGVSS-KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
S S D + +WD SS K VA H E++ +TF+ + Y+ S+G D+ VKLW
Sbjct: 379 SASDDFTMYLWDPESSSKPVARLL-GHQ-KEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 318 ARCLIAYTGAGSMGQQFELTLTVDA 342
+ + T G +G ++ + D+
Sbjct: 437 GKFIT--TLRGHVGAVYQCCFSADS 459
Score = 80 (33.2 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H S A ++S +G + ATGS+D +++I D AK P +GH ++ +
Sbjct: 190 HTSWVLAVSYSPNGAMIATGSMDNTVRIWD-----AKKGQALGAPL---KGH--VKWITS 239
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDY-SKSS--VRKAHK 218
E L+ P LAS SKD TV+++D SK + V HK
Sbjct: 240 LAWEPYHLQ-QSGHPRLASASKDSTVRIWDVISKRADIVLSGHK 282
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 134 (52.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 49/172 (28%), Positives = 74/172 (43%)
Query: 146 LDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204
L D + + ++ S + Q P IR L H +TCL P + S +KD T+
Sbjct: 112 LKEDVLEQRGRLQKSVAKEIQAPDPADIRILRGHQLSITCLVVTPDDLAIFSAAKDCTI- 170
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264
+S S RK H I + + P G + H + SSDG+ SG +
Sbjct: 171 -IKWSVESGRKLH-VIPRAK--KGTEGQPPGH-----STHVLCMAISSDGKYLASGDRSK 221
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316
I IW+ S + + TF+ D +S L F R L S+ D VK+W ++
Sbjct: 222 LILIWEAQSCQHLYTFTGHRDA--VSGLAFRRGTHQLYSTSHDRSVKVWNVA 271
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 111 (44.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD V TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 192 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 248
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 249 LRQNK--LTYTMRGHADSVTGLSLS 271
Score = 103 (41.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 237 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRIWDVRPF 294
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 295 APKERCVKIFQG 306
Score = 94 (38.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 126 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 183
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 184 CYPARRGPQLVCTGSDDGTVKLWDI 208
Score = 72 (30.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 150 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 209
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 210 KKA---AVQTFQNTYQVLAVTFNDTSDQIISG 238
Score = 63 (27.2 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
++S P+ P++ L H EV C +FHP LAS D+ + +++
Sbjct: 72 LQSGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWN 121
Score = 57 (25.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 186
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 187 ARRGPQLVCTGSDDGTVKLW 206
Score = 51 (23.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
T++V S P R G QL TGS D ++K+ D+ + A + +++
Sbjct: 178 TSFVNSCY-PARRGP-----QLVCTGSDDGTVKLWDIRKKAAVQTFQNT 220
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 97 (39.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
S D ++ SG+ D K+WD C TF+ H+ ++I+++ F NG+ + + D+
Sbjct: 193 SPDFNLFISGACDASAKLWDVREGTCRQTFT-GHE-SDINAICFFPNGEAICTGSDDASC 250
Query: 311 KLWELSSARCLIAYT 325
+L++L + + LI ++
Sbjct: 251 RLFDLRADQELICFS 265
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
+S GR+ +G D + +WD + S+ V S HD +S L T +G + + DS
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWDSMKSERVGILS-GHDN-RVSCLGVTADGMAVATGSWDSF 335
Query: 310 VKLW 313
+K+W
Sbjct: 336 LKIW 339
Score = 82 (33.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE 180
R G + +L A TG + + LD + ++ S + + + G +T++ H
Sbjct: 129 REGNVKVSRELSAHTGYLSCC-RFLDDNNIVTSSGDTTCALWDIETGQQ--KTVFVGHTG 185
Query: 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240
+ L P + SG+ D + K++D + + R+ T ES + + F P G+ +
Sbjct: 186 DCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTF-TGHESD-INAICFFPNGEAICT 243
Query: 241 GTDHFVLRLYS--SDGRIYC 258
G+D RL+ +D + C
Sbjct: 244 GSDDASCRLFDLRADQELIC 263
Score = 77 (32.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
RTL H+ ++ + + + +L S S+D K+ + + K H S++V ++
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDG--KLIVWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 233 PCGDYMVVG-TDHF--VLRLYSSDGRIYCS 259
P G+++ G D+ + L S +G + S
Sbjct: 107 PSGNFVACGGLDNMCSIYNLKSREGNVKVS 136
Score = 66 (28.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 106 EPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV 148
E Q +T +V H C + A S D L +G+ DAS K+ DV
Sbjct: 172 ETGQQKTVFV-GHTGDCMSLAVSPDFNLFISGACDASAKLWDV 213
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 110 (43.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
++ C+GS DG +K+WD + TF + ++ ++TF ++S G D+ +K+W+
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTY---QVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 315 LSSARCLIAYTGAGSMGQQFELTLT 339
L + + YT G L+L+
Sbjct: 222 LRQNK--LTYTMRGHADSVTGLSLS 244
Score = 102 (41.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-- 316
SG D DIK+WD +K T + H + ++ L+ + G YLLS+ D+ V++W++
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTM-RGHADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
Query: 317 --SARCLIAYTG 326
RC+ + G
Sbjct: 268 APKERCVKIFQG 279
Score = 94 (38.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 234 CGDYMVV-GTDHFVLRL-YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
C +Y + G V+ L Y++DG + S S D + +WD + + V K H ++S
Sbjct: 99 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSF-VNS 156
Query: 292 LTFTRNGKYLLSSGKDS-LVKLWEL 315
R G L+ +G D VKLW++
Sbjct: 157 CYPARRGPQLVCTGSDDGTVKLWDI 181
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV-TCLEFHPSAPILASGSKDKTVKMFDYS 209
ML +S + + D + ++ L H V +C ++ +GS D TVK++D
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG 241
K + A +T Q + V ++F+ D ++ G
Sbjct: 183 KKA---AIQTFQNTYQVLAVTFNDTSDQIISG 211
Score = 65 (27.9 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++ P+ P++ L H EV C +FHP+ LAS D+ + +++
Sbjct: 45 LQAGPPRCSSLQAPIM-LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 94
Score = 57 (25.1 bits), Expect = 0.00036, Sum P(2) = 0.00035
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V L ++ +L S S DKTV ++D S++ R + ++FV S +P
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGER-VKRLKGHTSFVN--SCYP 159
Query: 234 C--GDYMV-VGTDHFVLRLY 250
G +V G+D ++L+
Sbjct: 160 ARRGPQLVCTGSDDGTVKLW 179
WARNING: HSPs involving 271 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 344 344 0.00097 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 521
No. of states in DFA: 608 (65 KB)
Total size of DFA: 231 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 30.73u 0.07s 30.80t Elapsed: 00:00:31
Total cpu time: 30.83u 0.08s 30.91t Elapsed: 00:00:32
Start: Thu Aug 15 13:14:12 2013 End: Thu Aug 15 13:14:44 2013
WARNINGS ISSUED: 2