BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15158
(709 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 566 bits (1460), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/515 (54%), Positives = 352/515 (68%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 566 bits (1458), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/515 (54%), Positives = 352/515 (68%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSL+LGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 564 bits (1453), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/515 (54%), Positives = 351/515 (68%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSL LGGKSPL+IF D +L+KAV+M M VFFNKGENCI+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/515 (54%), Positives = 351/515 (68%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGEN I+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/515 (54%), Positives = 351/515 (68%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSLELGGKSPL+IF D +L+KAV+M M VFFNKGEN I+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 560 bits (1444), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/515 (54%), Positives = 350/515 (67%), Gaps = 94/515 (18%)
Query: 242 VNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF 301
VNK+ + P QLFI GEFV++ G + INP + S IC V +A DVD A AA++AF
Sbjct: 28 VNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAF 87
Query: 302 E-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
E G W +++ARDRG L+++LAD+MEQ++EELATIE+LD+GAVYTLALKTHVGMSI T++Y
Sbjct: 88 ENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRY 147
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
FAGWCDKI G+TIPI ARPN N T TK+EP+GVCG++ PWNYPLMMLSWK A CLAAGN
Sbjct: 148 FAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGN 207
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
TVV+KP++V+PLTALK AEL+++AG PKGV+NILPG+G++ G+ +S H +RK+GFTGST
Sbjct: 208 TVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST 267
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G IMKS A SN+KKVSL LGGKSPL+IF D +L+KAV+M M VFFNKGEN I+AGR
Sbjct: 268 EVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR 327
Query: 541 IFVDSNIYDAFLEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARL 585
+FV+ +I++ F++KVV EV+KM NH+AHL KL++YC++ EGA L
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 586 LIGGKRLDRPG-----------------------------------DVDAVIKRANSTEY 610
+ GG ++ RPG DVDAV+ RAN+TE+
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYF 670
GLASG+FT DI NKA+Y
Sbjct: 448 GLASGVFTRDI-------------------------------------------NKALYV 464
Query: 671 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 705
DK+ +GTVFINTYNKTDVAAPFGGFKQSGFGKDL
Sbjct: 465 SDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/462 (42%), Positives = 274/462 (59%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
++FIN E+ +SV G NPA E +C V+ + +DVD A AA +AF+ W +
Sbjct: 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ KLADL+E+++ LAT+E+++ G +++ A +G I T +Y AGW DKI
Sbjct: 81 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 140
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP+ + FT+T+ EP+GVCG I PWN+PL+M WK+ P L+ GNTVV+KP+E
Sbjct: 141 QGRTIPMD----GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL + L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+VSLELGGKSP ++F D +LD AV + GVF+++G+ CI+A R+FV+ +IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 549 DAFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ + V KK K +K++D E K EGA+L GG
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VIKRAN+T YGL++GIFT+D
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
I+KA+ + SGTV++N Y+ PFGGFK SG G++L
Sbjct: 437 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 478
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/461 (42%), Positives = 271/461 (58%), Gaps = 54/461 (11%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRLS 309
++FIN E+ NS G NPA +C VQ A+ D+D A AA AF W R+
Sbjct: 20 KIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMD 79
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
A +RG L+ KLADL+E+++ LAT+ESL+ G + A + I T +Y+AGW DKI
Sbjct: 80 ASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIH 139
Query: 370 GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEV 429
G TIP+ FTFT+ EPIGVCG I PWN+PL+M +WK+AP L GNTVV+KP+E
Sbjct: 140 GMTIPVD----GDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQ 195
Query: 430 SPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKS 489
+PL+AL + L AGFP GV+NILPG G G AI+ H+ I K+ FTGST G I ++
Sbjct: 196 TPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEA 255
Query: 490 AAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYD 549
A SNLK+V+LELGGKSP +IF D +LD AV + GVFFN+G+ C + RIFV+ +IY+
Sbjct: 256 AGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYE 315
Query: 550 AFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDR 594
F+++ V K+ K +K+++ + +EGA+L GGK L R
Sbjct: 316 EFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGR 375
Query: 595 PG---------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
G +D VI+RAN++++GL + +FT+DI
Sbjct: 376 KGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDI 435
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
NKA+ + +GTV+IN YN + +PFGGFK SG G+++
Sbjct: 436 NKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREM 476
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/462 (41%), Positives = 275/462 (59%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
+LFIN E+ SV G + NPA E IC V+ A+ +DVD A AA +AF+ W +
Sbjct: 21 TKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTM 80
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L++KLADL+E+++ LAT+ES+++G V+ A + I +Y AGW DKI
Sbjct: 81 DASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKI 140
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP+ F++T+ EPIGVCGLI PWN P+++L+ K+ P L GNTV++KP+E
Sbjct: 141 QGRTIPVD----GEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAE 196
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL +A L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQE 256
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+AA+SNLK+V+LELG K+P ++F D +LD AV + GVF N+G++CI+A ++FV+ IY
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIY 316
Query: 549 DAFLEKVVTEVKK----------MNH-----KAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+++ V KK +NH KA +K+++ E K EGA+L GG
Sbjct: 317 DEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWG 376
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VIKRAN+T YGL +G+FT D
Sbjct: 377 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKD 436
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
++KA+ + +GTV++N Y +P GGFK SG G+++
Sbjct: 437 LDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREM 478
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 266/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 6 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 65
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 66 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 125
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 126 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 181
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 182 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 241
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ C + R
Sbjct: 242 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR 301
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 302 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 361
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 362 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 421
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 422 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 471
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 351 bits (900), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 266/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ C + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 266/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ C + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 267/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+L+LGGKSP +I D ++D AV + +FFN+G++C + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 266/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ C + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQEL 477
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 265/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV F GST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ C + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 265/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 265/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 265/470 (56%), Gaps = 54/470 (11%)
Query: 243 NKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE 302
N+ F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+
Sbjct: 12 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 71
Query: 303 --GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKY 360
W R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y
Sbjct: 72 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 131
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGN 420
+AGW DK G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN
Sbjct: 132 YAGWADKYHGKTIPID----GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 187
Query: 421 TVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGST 480
VVMK +E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST
Sbjct: 188 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
G I +A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R
Sbjct: 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSR 307
Query: 541 IFVDSNIYDAFLEKVVTEVK----------KMNHKAHLD-----KLIDYCEKAKSEGARL 585
FV +IYD F+E+ V K K +D K++ Y K EGA+L
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 586 LIGGK-RLDRP--------GDV------------------------DAVIKRANSTEYGL 612
L GG DR GDV + V+ RAN++ YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A+ +FT D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 477
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 264/505 (52%), Gaps = 97/505 (19%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
NQ+FIN E+ ++V + +NP+ IC V + DVD A AA AF+ W R+
Sbjct: 19 NQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRM 78
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y+AGW DK
Sbjct: 79 DASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKY 138
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN VVMK +E
Sbjct: 139 HGKTIPID----GDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL +A L AGFP GV+N++PG G G AI+ H + KV FTGST G I
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+V+LE+GGKSP +I D ++D AV + +FFN+G+ C + R FV +IY
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 549 DAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGG-KRL 592
F+E+ V TE + K++ Y + K EG +LL GG
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAA 374
Query: 593 DRP--------GDV------------------------DAVIKRANSTEYGLASGIFTSD 620
DR GD+ + V+ RAN+++YGLA+ +FT
Sbjct: 375 DRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFT-- 432
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVF 680
KDLD KA Y + +GTV+
Sbjct: 433 ---------------------------------------KDLD--KANYLSQALQAGTVW 451
Query: 681 INTYNKTDVAAPFGGFKQSGFGKDL 705
+N Y+ +PFGG+K SG G++L
Sbjct: 452 VNCYDVFGAQSPFGGYKLSGSGREL 476
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 267/488 (54%), Gaps = 62/488 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE--WSRL 308
+L+I G +V + G++ E INPAN + VQ A+ +DV+ A + A EG+ W+ +
Sbjct: 6 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVE---RAVQSAVEGQKVWAAM 62
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A R ++ + D++ + +ELA +E+LD+G + D +Y+AG I
Sbjct: 63 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 122
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP+ ++F +T+REP+GV I WNYP+ + WK AP LAAGN ++ KPSE
Sbjct: 123 EGEQIPLRE----TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALKLAE+ AG P GV N+L G+G G+ +++H I K+ FTG T TG K+M
Sbjct: 179 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
SA+ S+LK+V++ELGGKSPL+IF D +LD+A +++ FF+ G+ C + R+F+ +
Sbjct: 239 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 549 DAFLEKVVTEVKKMNHK---------------AHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F KV+ V+++ H++ ++ Y E K++ ARLL GG+R+
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 594 RPG-------------------------------------DVDAVIKRANSTEYGLASGI 616
D D I+RAN TEYGLA+G+
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
T D+ +A + ++++G +INT+ ++ P GG+KQSG G++ + ++ +I S
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYT-RIKS 477
Query: 677 GTVFINTY 684
V + Y
Sbjct: 478 VQVELGDY 485
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 267/488 (54%), Gaps = 62/488 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE--WSRL 308
+L+I G +V + G++ E INPAN + VQ A+ +DV+ A + A EG+ W+ +
Sbjct: 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVE---RAVQSAVEGQKVWAAM 63
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A R ++ + D++ + +ELA +E+LD+G + D +Y+AG I
Sbjct: 64 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 123
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP+ ++F +T+REP+GV I WNYP+ + WK AP LAAGN ++ KPSE
Sbjct: 124 EGEQIPLRE----TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALKLAE+ AG P GV N+L G+G G+ +++H I K+ FTG T TG K+M
Sbjct: 180 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
SA+ S+LK+V++ELGGKSPL+IF D +LD+A +++ FF+ G+ C + R+F+ +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 299
Query: 549 DAFLEKVVTEVKKMNHK---------------AHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F KV+ V+++ H++ ++ Y E K++ ARLL GG+R+
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 594 RPG-------------------------------------DVDAVIKRANSTEYGLASGI 616
D D I+RAN TEYGLA+G+
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
T D+ +A + ++++G +INT+ ++ P GG+KQSG G++ + ++ +I S
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYT-RIKS 478
Query: 677 GTVFINTY 684
V + Y
Sbjct: 479 VQVELGDY 486
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 266/488 (54%), Gaps = 62/488 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE--WSRL 308
+L+I G +V + G++ E INPAN + VQ A+ +DV+ A + A EG+ W+ +
Sbjct: 6 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVE---RAVQSAVEGQKVWAAM 62
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A R ++ + D++ + +ELA +E+LD+G + D +Y+AG I
Sbjct: 63 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 122
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP+ ++F +T+REP+GV I WNYP+ + WK AP LAAGN ++ KPSE
Sbjct: 123 EGEQIPLRE----TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALKLAE+ AG P GV N+L G+G G+ +++H I K+ FTG T TG K+M
Sbjct: 179 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 238
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
SA+ S+LK+V++ LGGKSPL+IF D +LD+A +++ FF+ G+ C + R+F+ +
Sbjct: 239 SASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQ 298
Query: 549 DAFLEKVVTEVKKMNHK---------------AHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F KV+ V+++ H++ ++ Y E K++ ARLL GG+R+
Sbjct: 299 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 358
Query: 594 RPG-------------------------------------DVDAVIKRANSTEYGLASGI 616
D D I+RAN TEYGLA+G+
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
T D+ +A + ++++G +INT+ ++ P GG+KQSG G++ + ++ +I S
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYT-RIKS 477
Query: 677 GTVFINTY 684
V + Y
Sbjct: 478 VQVELGDY 485
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 266/488 (54%), Gaps = 62/488 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE--WSRL 308
+L+I G +V + G++ E INPAN + VQ A+ +DV+ A + A EG+ W+ +
Sbjct: 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVE---RAVQSAVEGQKVWAAM 63
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A R ++ + D++ + +ELA +E+LD+G + D +Y+AG I
Sbjct: 64 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 123
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP+ ++F +T+REP+GV I WNYP+ + WK AP LAAGN ++ KPSE
Sbjct: 124 EGEQIPLRE----TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALKLAE+ AG P GV N+L G+G G+ +++H I K+ FTG T TG K+M
Sbjct: 180 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
SA+ S+LK+V++ELGGKSPL+IF D +LD+A +++ FF+ G+ + R+F+ +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQ 299
Query: 549 DAFLEKVVTEVKKMNHK---------------AHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F KV+ V+++ H++ ++ Y E K++ ARLL GG+R+
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 594 RPG-------------------------------------DVDAVIKRANSTEYGLASGI 616
D D I+RAN TEYGLA+G+
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
T D+ +A + ++++G +INT+ ++ P GG+KQSG G++ + ++ +I S
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYT-RIKS 478
Query: 677 GTVFINTY 684
V + Y
Sbjct: 479 VQVELGDY 486
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 266/488 (54%), Gaps = 62/488 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE--WSRL 308
+L+I G +V + G++ E INPAN + VQ A+ +DV+ A + A EG+ W+ +
Sbjct: 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVE---RAVQSAVEGQKVWAAM 63
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A R ++ + D++ + +ELA +E+LD+G + D +Y+AG I
Sbjct: 64 TAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAI 123
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G IP+ ++F +T+REP+GV I WNYP+ + WK AP LAAGN ++ KPSE
Sbjct: 124 EGEQIPLRE----TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
V+PLTALKLAE+ AG P GV N+L G+G G+ +++H I K+ FTG T TG K+M
Sbjct: 180 VTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
SA+ S+LK+V++ELGGKSPL+IF D +LD+A +++ FF+ G+ + R+F+ +
Sbjct: 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQ 299
Query: 549 DAFLEKVVTEVKKMNHK---------------AHLDKLIDYCEKAKSEGARLLIGGKRLD 593
F KV+ V+++ H++ ++ Y E K++ ARLL GG+R+
Sbjct: 300 ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359
Query: 594 RPG-------------------------------------DVDAVIKRANSTEYGLASGI 616
D D I+RAN TEYGLA+G+
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 617 FTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDS 676
T D+ +A + ++++G +INT+ ++ P GG+KQSG G++ + ++ +I S
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYT-RIKS 478
Query: 677 GTVFINTY 684
V + Y
Sbjct: 479 VQVELGDY 486
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 269/489 (55%), Gaps = 68/489 (13%)
Query: 233 LNHESIKLNVNKMDV--SFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDV 290
L E++ N M++ + +I+GE+V S ++ + INP N+ I +V +D
Sbjct: 13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDA 72
Query: 291 DIAALAAEKAFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349
+ A LAA +AFE GEWS+ +A RG + +AD +++++E LA +E+LD+G ++
Sbjct: 73 ERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLE---ES 129
Query: 350 HVGMS--IDTWKYFAGWCDKILGSTI--PIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405
+ M + + YFAG DK G I PI P++ K EP+GV ITPWNYPL
Sbjct: 130 YADMDDIHNVFMYFAGLADKDGGEMIDSPI----PDTESKIVK-EPVGVVTQITPWNYPL 184
Query: 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
+ SWK+AP LA G ++VMKPSE++PLT +++ EL GFPKG IN++ G G+ G+ +
Sbjct: 185 LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVM 244
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG 525
S H ++ V FTG TG IMK+AA +N+ ++LELGGK+P +IFDD + + AV ++
Sbjct: 245 SGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALN 303
Query: 526 GVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDK 570
G +F+ G+ C + RI V ++I D F + ++ VKK+ H +K
Sbjct: 304 GGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNK 363
Query: 571 LIDYCEKAKSEGARLLIGGKRLDRPGDVDAV----------------------------- 601
+ Y + AK+EGA + +GGKR DR D +
Sbjct: 364 IESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423
Query: 602 --------IKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGF 653
I+ AN + YGLA +F+ DI KA +K+ GTV+IN ++ AP+GG+
Sbjct: 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGY 483
Query: 654 KQSGFGKDL 662
KQSG G++L
Sbjct: 484 KQSGIGREL 492
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 262/492 (53%), Gaps = 66/492 (13%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
FI+G++V G+ E I PA I + A V+ A +A++A + EW+ +S R
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRA-QKEWAAMSPMAR 76
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL-GST 372
G ++ + AD+M + + L+T+E+LD+G + D +++F G L G
Sbjct: 77 GRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDY 136
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
IP+ +F +TKR P+GVC I WNYP + WK AP L AGN +V KPSE +PL
Sbjct: 137 IPL-----GGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
ALK+AE+ + AG PKG+ N++ G TG + H + KV TGS TG K+ +AA
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA- 249
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+LK V++ELGGKSP+++FDD +++ AV +M G F++ G+ C + R+FV FL
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 309
Query: 553 EKV---------------VTEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGG-------- 589
E + T + + KA +K++ Y EK K+EGA L+ GG
Sbjct: 310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAG 369
Query: 590 ---------------------KRLDRP-------GDVDAVIKRANSTEYGLASGIFTSDI 621
+ + P D D V+ RAN+TE+GLA G+FT+D+
Sbjct: 370 EGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADL 429
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFI 681
+A VD +++GT++INTYN V PFGG KQSGFG++ N A + TV++
Sbjct: 430 ARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE---NSAAALEHYSELKTVYV 486
Query: 682 NTYNKTDVAAPF 693
+T K D AP+
Sbjct: 487 ST-GKVD--APY 495
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 253/464 (54%), Gaps = 65/464 (14%)
Query: 254 FINGEFVNSVGGSSMECI-NPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+ G + S G++ E + PA +C + +++VD A +A+ A+ +WS+++ +
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-KWSKMAGIE 81
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +M + A ++ + ++ +A +E +++G T A + + + +Y+AG + G
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQH 140
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
I + P F +T+REP+GVC I WNYP M+ +WK AP LA GN VV KPS ++P+
Sbjct: 141 IQL----PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
T + LAE+ AG P G++N++ G GA TG + H + KV FTGS TG K+M+ +A+
Sbjct: 197 TGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+ +K V+LELGGKSPL+IF D L+ AVR ++ F +G+ C + R+FV I FL
Sbjct: 256 T-VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 314
Query: 553 EKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGD 597
E+VV K + K LDK++ + +AK EGAR+L GG+ L P D
Sbjct: 315 EEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT-PSD 373
Query: 598 V----------------------------------------DAVIKRANSTEYGLASGIF 617
+ V++RAN+T +GLASG+F
Sbjct: 374 PKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVF 433
Query: 618 TSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
T DI++A +++GT +INTY+ + V PFGG+K SGFG++
Sbjct: 434 TRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRE 477
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 274/536 (51%), Gaps = 79/536 (14%)
Query: 225 RQGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQM 284
R D ++ E+I+ V + P FI GEFV S G + ++PA +
Sbjct: 2 RYADRVAGISWETIE-EVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAAR 60
Query: 285 ANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYT 344
+VD AA AA +AF+ WSR A++R + ++A+L+E++ +ELA +E LD+G V
Sbjct: 61 GGEREVDRAAKAAHEAFQ-RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLR 119
Query: 345 LALKTHVGMSIDTWKYFAGWCDKIL-GSTIPIAHARPNSNFTFTKREPIGVCGLITPWNY 403
+ ++ V + + + ++A + + + T P+ +T R P G G+ITPWN
Sbjct: 120 I-VRAQVARAAENFAFYAEYAEHAMEDRTFPVD----RDWLYYTVRVPAGPVGIITPWNA 174
Query: 404 PLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGE 463
PLM+ +W++AP LA GNTVV+KP+E SP TA KLAE+ A P GV N++ G G G
Sbjct: 175 PLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGA 234
Query: 464 AISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMS 523
A+ H + + TG T TG +M++AA+ +LK++S ELGGKSP ++F D +L++A+
Sbjct: 235 ALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADLERALDAV 293
Query: 524 MGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV---------------TEVKKMNHKAHL 568
+ +F GE C ++ R+ V+ I++ F+ KVV TEV + H HL
Sbjct: 294 VFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHL 353
Query: 569 DKLIDYCEKAKSEGARLLIGGKR---------LDRPG----------------------- 596
+++ Y E K EGARLL+GG+R L R
Sbjct: 354 QRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGP 413
Query: 597 --------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA 648
D + +++AN T+YGLA+ +FT D+ +A ++++G V++N++N +
Sbjct: 414 VLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPT 473
Query: 649 PFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGK 703
PFGG K SG D+ + GT ++ Y +A P FGK
Sbjct: 474 PFGGVKGSG--------------DRREGGTYALDFYTDLKTIALPLRPPHVPKFGK 515
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 253/479 (52%), Gaps = 74/479 (15%)
Query: 247 VSFP---NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
++FP QLFI+GE+ + + + INP+ E I + A ++DV++A +AA +AF
Sbjct: 1 MAFPIPARQLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRR 60
Query: 303 GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID----TW 358
WS S R + +A + + K+ +E++DSG + A+ + ID +
Sbjct: 61 NNWSATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAV-----LDIDDVASCF 115
Query: 359 KYFAGWCDKILGS-----TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413
+YFAG + + G T+P+ + + R+P+GV GLI+PWNYPL+M +WK+A
Sbjct: 116 EYFAGQAEALDGKQKAPVTLPMERFK-----SHVLRQPLGVVGLISPWNYPLLMATWKIA 170
Query: 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRK 473
P LAAG T V+KPSE++ +T L+ E+ G P GV+NIL G G G + H + K
Sbjct: 171 PALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDK 230
Query: 474 VGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGE 533
+ FTGS+ TG K+M SAA+ +K V+LELGGKSP+V+F+D ++DK V ++ G F+ G+
Sbjct: 231 IAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQ 289
Query: 534 NCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKA 578
C + R+ V +I F++K+V K + K DK++ + A
Sbjct: 290 ICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTA 349
Query: 579 KSEGARLLIGGKRLDR--------PGDV---------------------------DAVIK 603
KSEGA +L GG R + P V D I
Sbjct: 350 KSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIA 409
Query: 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
AN TEYGLA+ +F++D+ + ++ G V++N V AP+GG K+SGFG++L
Sbjct: 410 LANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGREL 468
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 247/461 (53%), Gaps = 54/461 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F Q INGE++++ G +++ NPAN + SV +D+ A AA +A W L
Sbjct: 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-WRAL 66
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R ++ +LM +++++LA + +L+ G A K + + ++FA +I
Sbjct: 67 TAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRI 125
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP A ++PIGV ITPWN+P M++ K P LAAG T+V+KP+
Sbjct: 126 YGDTIPGHQA---DKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPAS 182
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+P +AL LAEL++RAG P GV N++ G+ G ++ + +RK+ FTGST G ++M+
Sbjct: 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A+ ++KKVSLELGG +P ++FDD +LDKAV ++ F N G+ C+ A R++V +Y
Sbjct: 243 QCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 301
Query: 549 DAFLEKVVTEVKKMNHKAHLD------KLIDYCEKAKSE---------GARLLIGGKRLD 593
D F EK+ + K++ LD LID AK E GAR++ GGK +
Sbjct: 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE 361
Query: 594 RPG---------DVDA------------------------VIKRANSTEYGLASGIFTSD 620
R G DV A VI +AN TE+GLA+ + D
Sbjct: 362 RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+++ + ++ G V INT ++ APFGG K SG G++
Sbjct: 422 LSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGRE 462
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 247/461 (53%), Gaps = 54/461 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRL 308
F Q INGE++++ G +++ NPAN + SV +D+ A AA +A W L
Sbjct: 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-WRAL 66
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
+A++R ++ +LM +++++LA + +L+ G A K + + ++FA +I
Sbjct: 67 TAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRI 125
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP A ++PIGV ITPWN+P M++ K P LAAG T+V+KP+
Sbjct: 126 YGDTIPGHQA---DKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPAS 182
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+P +AL LAEL++RAG P GV N++ G+ G ++ + +RK+ FTGST G ++M+
Sbjct: 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A+ ++KKVSLELGG +P ++FDD +LDKAV ++ F N G+ C+ A R++V +Y
Sbjct: 243 QCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 301
Query: 549 DAFLEKVVTEVKKMNHKAHLD------KLIDYCEKAKSE---------GARLLIGGKRLD 593
D F EK+ + K++ LD LID AK E GAR++ GGK +
Sbjct: 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE 361
Query: 594 RPG---------DVDA------------------------VIKRANSTEYGLASGIFTSD 620
R G DV A VI +AN TE+GLA+ + D
Sbjct: 362 RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+++ + ++ G V INT ++ APFGG K SG G++
Sbjct: 422 LSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGRE 462
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 249/463 (53%), Gaps = 56/463 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
++L INGE V S G NPA + + A+++ VD A AA+ AF EW + +
Sbjct: 24 HKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-EWGQTTP 81
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+ R + KLAD++E+N + A +ES + G A + +D +++FAG + G
Sbjct: 82 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
A + + +R+P+GV I PWNYPLMM +WK+AP LAAGN VV+KPSE++
Sbjct: 142 LA---AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 198
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTALKLAEL+ + FP GV+NIL G G G+ ++ H K+R V TGS TG I+
Sbjct: 199 PLTALKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A S++K+ +ELGGK+P+++FDD +++ V ++N G++C +A RI+ IYD
Sbjct: 258 A-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 316
Query: 551 FLEKV---------------VTEVKKMNHKAHLDKLIDYCEKAKSEGA-RLLIGGKRLDR 594
+EK+ TE+ ++ AHL+++ E+AK+ G +++ GG++
Sbjct: 317 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 376
Query: 595 PGDV------------DAVIKR---------------------ANSTEYGLASGIFTSDI 621
G DA++++ AN ++YGLAS ++T D+
Sbjct: 377 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 436
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDI 664
+A ++ G ++NT+ P GG K SG+GKD+ +
Sbjct: 437 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 479
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 245/471 (52%), Gaps = 57/471 (12%)
Query: 246 DVSFPN-QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EG 303
+V P QL+I GE+ V + + INPA E I + A ++DVDIA AA KA
Sbjct: 18 NVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD 77
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSG-AVYTLALKTHVGMSIDTWKYFA 362
+W + R + +A + + K LAT+ESLDSG +Y A + ++Y+A
Sbjct: 78 DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA--ADMDDVAGCFEYYA 135
Query: 363 GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
G + + + + +S ++ REP+GV GLITPWNYPL+M WK+AP LAAG
Sbjct: 136 GLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAA 195
Query: 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
++KPSE++ +T L+L E+ G P G +NIL G G G ++ H + K+ FTGS T
Sbjct: 196 ILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPT 255
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRI 541
G KIM +AA+ +K VSLELGGKSP+V+FDD NLD A ++ G+F N G+ C + R+
Sbjct: 256 GSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRL 314
Query: 542 FVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLL 586
V NI AF+++++ K + +K++ + AKSEGA +L
Sbjct: 315 IVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATIL 374
Query: 587 IGGKRLD--------RP------------------GDV---------DAVIKRANSTEYG 611
GG+R +P G V + I+ AN T+YG
Sbjct: 375 CGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYG 434
Query: 612 LASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
L + + + D+ + F +G ++IN T P+GG K+SGFG+DL
Sbjct: 435 LGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDL 485
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 245/479 (51%), Gaps = 69/479 (14%)
Query: 245 MDVSFPN-QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE- 302
MD+ P QLFING++ V + INPA ++ I + A +DVD+A AA+ A
Sbjct: 1 MDIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTR 60
Query: 303 ---GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID--- 356
+W+ S R + +A + + K ELA +ES+D G A ID
Sbjct: 61 NKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-----AWDIDDVA 115
Query: 357 -TWKYFAGWCDKI-LGSTIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMA 413
++Y+A +K+ P++ P F + REPIGV GLITPWNYP++M +WK+A
Sbjct: 116 GCFEYYADLAEKLDARQKAPVS--LPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVA 173
Query: 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRK 473
P LAAG ++KPSE++ LT L+L E+ G P GV+NIL G G G ++ H + K
Sbjct: 174 PALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDK 233
Query: 474 VGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGE 533
V FTGS+ TG KIM +AA+ +K VSLELGGKSPLV+F+D +LDKA ++ G F+ G+
Sbjct: 234 VAFTGSSATGSKIMTAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQ 292
Query: 534 NCISAGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKA 578
C + R+ + +I FL ++V +K + + +K++ + A
Sbjct: 293 ICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNA 352
Query: 579 KSEGARLLIGGKRLDR--------P------------------GDVDAV---------IK 603
KSEGA +L GG R + P G V V I
Sbjct: 353 KSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAID 412
Query: 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
AN T YGL + + ++D+ + +G V++N AP+GG K+SGFG++L
Sbjct: 413 LANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGREL 471
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 244/471 (51%), Gaps = 57/471 (12%)
Query: 246 DVSFPN-QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAF-EG 303
+V P QL+I GE+ V + + INPA E I + A ++DVDIA AA KA
Sbjct: 18 NVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD 77
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSG-AVYTLALKTHVGMSIDTWKYFA 362
+W + R + +A + + K LAT+ESLDSG +Y A + ++Y+A
Sbjct: 78 DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA--ADMDDVAGCFEYYA 135
Query: 363 GWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
G + + + + +S ++ REP+GV GLITPWNYPL+M WK+AP LAAG
Sbjct: 136 GLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAA 195
Query: 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
++KPSE++ +T L+L E+ G P G +NIL G G G ++ H + K+ FTGS T
Sbjct: 196 ILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPT 255
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDY-NLDKAVRMSMGGVFFNKGENCISAGRI 541
G KIM +AA+ +K VSL LGGKSP+V+FDD NLD A ++ G+F N G+ C + R+
Sbjct: 256 GSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRL 314
Query: 542 FVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLL 586
V NI AF+++++ K + +K++ + AKSEGA +L
Sbjct: 315 IVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATIL 374
Query: 587 IGGKRLD--------RP------------------GDV---------DAVIKRANSTEYG 611
GG+R +P G V + I+ AN T+YG
Sbjct: 375 CGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYG 434
Query: 612 LASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
L + + + D+ + F +G ++IN T P+GG K+SGFG+DL
Sbjct: 435 LGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDL 485
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 249/467 (53%), Gaps = 58/467 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEG----EWS 306
QLFI+GE+ + + INP+ E+ I + A +DVD+A AA++A +WS
Sbjct: 8 RQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWS 67
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
S R + +A +++ K+EL +ES+D G AL + + ++Y+AG +
Sbjct: 68 AASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEAL-ADLDDVVACFEYYAGLAE 126
Query: 367 KILGSTIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
+ L S + P F ++ +EPIGV LITPWNYP +M +WK+AP LAAG ++K
Sbjct: 127 E-LDSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILK 185
Query: 426 PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485
PSE++ +T L+L E+ G P+GV+NI+ G G G +++ H + K+ FTGS+ TG K
Sbjct: 186 PSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSK 245
Query: 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
IM +AA+ +K VSLELGGKSP+V+F+D +LDK ++ G FF G+ C + R+ V
Sbjct: 246 IMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHE 304
Query: 546 NIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGK 590
+I F++K+V + + +A K+++ AKSEGA +L GG+
Sbjct: 305 SIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGR 364
Query: 591 RLDR--------P------------------GDVDAV---------IKRANSTEYGLASG 615
R + P G V AV I AN T YGL S
Sbjct: 365 RPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSA 424
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+ ++D+ + + +G V+IN + + AP+GG K+SGFG++L
Sbjct: 425 VMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGREL 471
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 244/470 (51%), Gaps = 64/470 (13%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEG----EWS 306
QLF++GE+ G + +NP E+ I + ++DVD A AA A + +W+
Sbjct: 25 RQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWA 84
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWC- 365
R R + +A + + K ELA +E+LD G Y A ++ ++YFA
Sbjct: 85 RAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVA-GCFEYFADQAE 143
Query: 366 --DKILGSTIPIAHARPNSNF-TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTV 422
DK S + + P F +REPIGV GLITPWNYPL+M +WK+AP LAAG T
Sbjct: 144 ALDKRQNSPVSL----PMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTA 199
Query: 423 VMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVT 482
V+KPSE++ +T L+LA++ G P GV+NI+ G G G +S H + KV FTGS T
Sbjct: 200 VLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFET 259
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIF 542
G KIM SAA +K V+LELGGKSP+V+FDD ++DKAV ++ G F+ G+ C + R+
Sbjct: 260 GKKIMASAA-PMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLL 318
Query: 543 VDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLI 587
+ + I F E++V K + + +K+ + AKS+GA +L
Sbjct: 319 IHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILT 378
Query: 588 GGKR---LDR-----P------------------GDV---------DAVIKRANSTEYGL 612
GG R L++ P G V D I+ AN T+YGL
Sbjct: 379 GGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGL 438
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
A + + D + ++ID+G +++N AP+GG K+SGFG++L
Sbjct: 439 AGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGREL 488
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 234/463 (50%), Gaps = 58/463 (12%)
Query: 252 QLFINGEFVNSVGGSSMECI-NPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
QL I F G + E I NP + I + A+ +D A AAE+AF G WS+ +
Sbjct: 27 QLLIGSRF--EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVG-WSQTTP 83
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+R + + K+AD +E+ +E A +E+L+ G + ID W++FAG +
Sbjct: 84 AERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHA 143
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
P A + + +R+PIG+ G I PWNYPL +WK+AP + GNTVV KPSE +
Sbjct: 144 ---PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQT 200
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTALKLA L + P+GV+N++ G G G A+ H K+ V TG TG K++ +A
Sbjct: 201 PLTALKLARL-IADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAA 259
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A++ +K+ LELGGK+P++++ D +L+ V ++N G++C +A RI+ ++ IY+
Sbjct: 260 AKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318
Query: 551 FLEKVVTEVKKMNH---------------KAHLDKLIDYCEKAKSEGARLLIGGKRLD-- 593
+ + + V + + + D++ + E+A + + G R
Sbjct: 319 LVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSD 378
Query: 594 -----RPGDV------DAVIKR---------------------ANSTEYGLASGIFTSDI 621
+P V D +++R AN ++YGLAS ++T DI
Sbjct: 379 EGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDI 438
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDI 664
+KA ++ G +INT+ P GG KQSG+GKD +
Sbjct: 439 SKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSV 481
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 228/468 (48%), Gaps = 80/468 (17%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
+INGE+V S ++E INPA E I V N DVD A AA+ + E+ S ++R
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL-EFRHTSVKER 69
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
L+ K+ E K+++ + + GA +L+ + H ++ +F D +
Sbjct: 70 QALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLN---HFVAARDAL----- 121
Query: 374 PIAHARPNSNFTFTKR--------EPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
N+ F +R E IGV GLITPWN+P S K+A AAG+ VV+K
Sbjct: 122 --------DNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLK 173
Query: 426 PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485
PSE +P A+ LAE+ + G PKGV N++ G GA G +S+H K+R FTGS TG K
Sbjct: 174 PSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSK 233
Query: 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
I + AA+ + KKVSLELGGKSP ++ DD ++ +A + + G V N G+ C + R+ V +
Sbjct: 234 IXEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPN 292
Query: 546 NIYDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGK 590
I DAFL ++ T+V + K D++ +Y K EGA L GG
Sbjct: 293 KIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP 352
Query: 591 ---------RLDRP---------------------------GDVDAVIKRANSTEYGLAS 614
RP D+D I+ AN T+YGLA
Sbjct: 353 GKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAG 412
Query: 615 GIFTSDINKAMYFVDKIDSGTVFINTY-NKTDVAAPFGGFKQSGFGKD 661
+ D I++GTV IN K D+ PFGG+KQSG G++
Sbjct: 413 YVIGKDKETLHKVARSIEAGTVEINEAGRKPDL--PFGGYKQSGLGRE 458
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 240/459 (52%), Gaps = 54/459 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
+Q +I GE+ + ++ E +PA ++ +V + + A AA+ A+ G W +A
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG-WRMKTA 71
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
++R ++ + DL+ N ++LA I + + G A K + + ++FA ++ G
Sbjct: 72 KERAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAG 130
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
T+P A N K EPIGVC ITPWN+P M++ K+ P LAAG +V+KP+E +
Sbjct: 131 DTLPTPDA--NKRIVVVK-EPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAEST 187
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
P +AL +A L+ RAG PKGV++++ G G I+ + +RK+ FTGST G +M +
Sbjct: 188 PFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A + +KK++LELGG +P ++FDD +LD AV ++ + N G+ C+ R FV +YDA
Sbjct: 248 APT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGKR---- 591
F +K+ V K+ ++A + K+ + A ++GA L+ GGKR
Sbjct: 307 FADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALG 366
Query: 592 -----------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDIN 622
L R + +++ AN TE+GLA+ +++ DI
Sbjct: 367 HGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIG 426
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+ + ++ G V INT ++ APFGG KQSG G++
Sbjct: 427 RVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGRE 465
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 245/473 (51%), Gaps = 56/473 (11%)
Query: 241 NVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSV-QMANSDDVDIAALAAEK 299
N ++ + Q ++G+ V++ GS+++ ++P + + A++DDV A AA K
Sbjct: 13 NDPRLRIKSRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARK 72
Query: 300 AFE-GEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTW 358
AF+ G W R S +R L FK+ADL+ +EELA IESL+ G A + +G D W
Sbjct: 73 AFDAGPWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLW 131
Query: 359 KYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAA 418
Y AG + G T + + REP+GV G+ITPWN+P ++ S ++ + +
Sbjct: 132 SYAAGQARALEGQT---HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGS 188
Query: 419 GNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTG 478
G TVV+KPSE + T+++LAEL+ AG P GV N++ G G G+ +++ + V FTG
Sbjct: 189 GCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTG 248
Query: 479 STVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISA 538
S G K+ + AA + +K+V LELGGK P ++F D +LD A GV+ N G+ CIS
Sbjct: 249 SVRVGTKLGEIAART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISG 307
Query: 539 GRIFVDSNIYDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGA 583
R+ V I DA E+++ T++ +AH +K+ Y + GA
Sbjct: 308 SRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGA 367
Query: 584 RLLIGGKRLDRPGDV----------------------------------DAVIKRANSTE 609
LL+GG+R+ R + D + AN+TE
Sbjct: 368 ELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATE 427
Query: 610 YGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+GL++ ++++++ A+ + +I +G +IN+ P GG+K+SG G++L
Sbjct: 428 FGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 245/457 (53%), Gaps = 52/457 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
+Q +NG ++++ G++++ NPA+ S I +V + + A A+ KA G W+ +A
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG-WAAKTA 91
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
++R ++ K DL+ N +++A I + + G A + V + ++FA ++ G
Sbjct: 92 KERAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYG 150
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
TIP A N R+P+GV ITPWN+P M++ K AP LAAG T++++P++++
Sbjct: 151 DTIP---APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLT 207
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTAL L L+ +AG P GV+ I+ G G ++ + +RK+ FTGST G +M
Sbjct: 208 PLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQC 267
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
A + +K++SLELGG +P ++FDD +LD AV +M + N G+ C+ A RI+V +YD
Sbjct: 268 APT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDK 326
Query: 551 FLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD-- 593
F EK+ +VK+ M + + K+ + E A S+GA+L+ GGK L
Sbjct: 327 FAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGL 386
Query: 594 --RPGDV---------------------------DAVIKRANSTEYGLASGIFTSDINKA 624
PG + + VI +AN T +GLA+ +T + ++A
Sbjct: 387 FFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRA 446
Query: 625 MYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+ + ++ G V NT ++ APFGG KQSG G++
Sbjct: 447 IRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGRE 483
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 236/458 (51%), Gaps = 63/458 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+FI+G+++N M+ INP + I + + ++ A AEK ++ L
Sbjct: 2 MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEK-YKEVMKNLPITK 57
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +++ +A +++ KEELA I ++D+G A + V SI T+K A + +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
IP + FT+REP+G+ G ITP+N+PL + + K+AP +A GN +V PS +PL
Sbjct: 117 IP-----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPL 171
Query: 433 TALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
++LA++ A P GV N+L G G V G+ I + K+ + FTGS+ G I K
Sbjct: 172 VCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
A KK++LELGG +P ++ D +L+KAV + G F G+ CIS G I VD +I
Sbjct: 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
Query: 549 DAFLEKVVTEVKKMNHKAHLDKLID---------------YCEKAKSEGARLLIGGKR-- 591
D F+E V + K +N LD+ D EKA EG +LL+GGKR
Sbjct: 289 DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK 348
Query: 592 ---------LDRPG-----------------DVDAVIKRANSTEYGLASGIFTSDINKAM 625
+DR + + +I ANSTEYGL S IFT+DINK++
Sbjct: 349 ALFYPTILEVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEYGLHSAIFTNDINKSL 408
Query: 626 YFVDKIDSGTVFIN--TYNKTDVAAPFGGFKQSGFGKD 661
F + ++ G V IN + + D PFGG K+SG G++
Sbjct: 409 KFAENLEFGGVVINDSSLFRQD-NMPFGGVKKSGLGRE 445
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 228/464 (49%), Gaps = 55/464 (11%)
Query: 245 MDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE 304
M V + ++I+G+FV G + ++ +NPA E+ I + ++D A AAE+A + E
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA-QPE 59
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W L A +R + K++ + + E++ + + G + LA + V + D Y A W
Sbjct: 60 WEALPAIERASWLRKISAGIRERATEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
+ G I RP N KR +GV I PWN+P +++ KMAP L GNT+V+
Sbjct: 119 ARRYEGEII--QSDRPGENILLFKRA-LGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 175
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE +P A+ A++ G P+GV N++ G G G+ ++ + K+ V TGS G
Sbjct: 176 KPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGE 235
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
KIM +AA+ N+ KV LELGGK+P ++ DD +L+ AV+ + N G+ C A R++V
Sbjct: 236 KIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQ 294
Query: 545 SNIYDAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIG 588
IYD F+ ++ ++ + + A L+++ +A EGAR+ +G
Sbjct: 295 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 354
Query: 589 GKRLDRPG---------------------------------DVDAVIKRANSTEYGLASG 615
GK ++ G ++ I AN ++YGL S
Sbjct: 355 GKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSS 414
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
I+T ++N AM + + G +IN N + G+++SG G
Sbjct: 415 IYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG 458
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 227/464 (48%), Gaps = 55/464 (11%)
Query: 245 MDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE 304
M V + ++I+G+FV G + ++ +NPA E+ I + ++D A AAE+A + E
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA-QPE 59
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W L A +R + K++ + + E++ + + G + LA + V + D Y A W
Sbjct: 60 WEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
+ G I RP N KR +GV I PWN+P +++ KMAP L GNT+V+
Sbjct: 119 ARRYEGEII--QSDRPGENILLFKRA-LGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 175
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE +P A+ A++ G P+GV N++ G G G+ ++ + K+ V TGS G
Sbjct: 176 KPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGE 235
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
KIM +AA+ N+ KV LELGGK+P ++ DD +L+ AV+ + N G+ C A R++V
Sbjct: 236 KIMATAAK-NITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQ 294
Query: 545 SNIYDAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIG 588
IYD F+ ++ ++ + + A L+++ +A EGAR+ G
Sbjct: 295 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFG 354
Query: 589 GKRLDRPG---------------------------------DVDAVIKRANSTEYGLASG 615
GK ++ G ++ I AN ++YGL S
Sbjct: 355 GKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSS 414
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
I+T ++N AM + + G +IN N + G+++SG G
Sbjct: 415 IYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG 458
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 227/464 (48%), Gaps = 55/464 (11%)
Query: 245 MDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGE 304
M V + ++I+G+FV G + ++ +NPA E+ I + ++D A AAE+A + E
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA-QPE 59
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
W L A +R + K++ + + E++ + + G + LA + V + D Y A W
Sbjct: 60 WEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
+ G I RP N KR +GV I PWN+P +++ KMAP L GNT+V+
Sbjct: 119 ARRYEGEII--QSDRPGENILLFKRA-LGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 175
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE +P A+ A++ G P+GV N++ G G G+ ++ + K+ V TGS G
Sbjct: 176 KPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGE 235
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
KIM +AA+ N+ KV LELGGK+P ++ DD +L+ AV+ + N G+ C A R++V
Sbjct: 236 KIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQ 294
Query: 545 SNIYDAFLEKVVTEVKKMN----------------HKAHLDKLIDYCEKAKSEGARLLIG 588
IYD F+ ++ ++ + + A L+++ +A EGAR+ G
Sbjct: 295 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFG 354
Query: 589 GKRLDRPG---------------------------------DVDAVIKRANSTEYGLASG 615
GK ++ G ++ I AN ++YGL S
Sbjct: 355 GKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSS 414
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFG 659
I+T ++N AM + + G +IN N + G+++SG G
Sbjct: 415 IYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG 458
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 225/457 (49%), Gaps = 59/457 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
+INGE+V S + +NPA + +C V ++ +D+D AA A +AF+ WS+++ R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK-TWSKVAVPRR 67
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
++F L+ Q+KEELA + ++++G AL VG I+ ++ AG ++G ++
Sbjct: 68 ARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSL 126
Query: 374 P-IAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
IA +N+ R PIGV G I P+N+P+M+ W +A GNT ++KPSE +PL
Sbjct: 127 ASIATDVEAANY----RYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
KL EL +AG PKGV N++ G V I +H +I+ + F GS G + K +E
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYGAHDVVN-GILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
NLK+V G K+ ++ +D NL+ V +G F + GE C++ + V+ I D F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 553 EKVVTEVKKMNHKAHLD---------------KLIDYCEKAKSEGARLLIGGKR------ 591
K+ +V + LD + + Y EK EGARL+ G+
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 592 ----------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINK 623
+ R ++ I+ AN +E+ + +FTS+ N
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 624 AMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFG 659
YF + ID+G + IN +A PF G+K S FG
Sbjct: 421 IRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 209/411 (50%), Gaps = 59/411 (14%)
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363
W +SA++R L+ K +LM QNK++LA I + +SG A + S ++F+
Sbjct: 63 RWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSE 121
Query: 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
++ G I H ++PIGV +ITPWN+P M++ K+ LAAG TVV
Sbjct: 122 EARRVYGDII---HTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVV 178
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPGT---GAVTGEAISQHLKIRKVGFTGST 480
+KP+E +P +AL LAEL+ +AG P GV N++P + GEAI + K+ FTGST
Sbjct: 179 VKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGST 238
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
TG KI+ A +++K+VS+ELGG +P ++FD N+D+AV +M F N G+ C+ + +
Sbjct: 239 TTG-KILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQ 297
Query: 541 IFVDSNIYDAFLEKVVTEVKK-----------------MNHKAHLDKLIDYCEKAKSEGA 583
V I+DAF++ +KK +N KA ++K+ A S+GA
Sbjct: 298 FLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKA-VEKVEKQVNDAVSKGA 356
Query: 584 RLLIGGKRLD------RP------------------GDVDAVIK---------RANSTEY 610
++ GGKR P G + VIK AN+ +
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
GLA ++ D + ++++ G V +N + V PFGG KQSG G++
Sbjct: 417 GLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 208/411 (50%), Gaps = 59/411 (14%)
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG 363
W +SA++R L+ K +LM QNK++LA I + +SG A + S ++F+
Sbjct: 63 RWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSE 121
Query: 364 WCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
++ G I H ++PIGV +ITPWN+P M++ K+ LAAG TVV
Sbjct: 122 EARRVYGDII---HTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVV 178
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPGT---GAVTGEAISQHLKIRKVGFTGST 480
+KP+E +P +AL LAEL+ +AG P GV N++P + GEAI + K+ FTGST
Sbjct: 179 VKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGST 238
Query: 481 VTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGR 540
TG KI+ A +++K+VS+ELGG +P ++FD N+D+AV +M F N G+ + + +
Sbjct: 239 TTG-KILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQ 297
Query: 541 IFVDSNIYDAFLEKVVTEVKK-----------------MNHKAHLDKLIDYCEKAKSEGA 583
V I+DAF++ +KK +N KA ++K+ A S+GA
Sbjct: 298 FLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKA-VEKVEKQVNDAVSKGA 356
Query: 584 RLLIGGKRLD------RP------------------GDVDAVIK---------RANSTEY 610
++ GGKR P G + VIK AN+ +
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
GLA ++ D + ++++ G V +N + V PFGG KQSG G++
Sbjct: 417 GLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 221/463 (47%), Gaps = 60/463 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE-GEWSRLS 309
++LFI G++ +E PA + V MA + DVD A AA AF+ G W
Sbjct: 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTP 68
Query: 310 ARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKIL 369
+R ++ ++ + K+ + + ++G T+ H S+ YFAG DK+
Sbjct: 69 PHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVT 128
Query: 370 GSTIPIAHARPNS-NFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
+ R S + REP+GV G I WN PL + K+AP L AG T+V+KP+
Sbjct: 129 WT-----ETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTA LAE+ G P+GV++++PG G TG+A++ + I FTGS+ G ++ +
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGR 242
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
AAE LK +LELGGKS +I +D +L A+ M + N G+ C++ RI + Y
Sbjct: 243 RAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 549 DAFLEKVVTEVKKM------NHKAHLDKLID---------YCEKAKSEGARLLIGGKRLD 593
D + V V + + A + LI Y K EGARL+ GG R +
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 594 --------RP------------------GDVDAVIKR---------ANSTEYGLASGIFT 618
+P G V A+I AN + YGLA ++T
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWT 421
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
+D+ K + +I +GT IN Y D +PFGG+K SG G++
Sbjct: 422 TDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRE 463
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 230/479 (48%), Gaps = 73/479 (15%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ +ING + + + I+P+ E + + ++ D D A AA+KAF+ W S
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ-TWKTTSPH 85
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL-------KTHVGMSIDTWKYFAGW 364
+R + K+ ++ E+ ++A S++ GA +AL +H+ I +K F+
Sbjct: 86 ERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQ 145
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVM 424
I G+ I H + IGV GLITPWN+P+ ++ K+ P L AG T+V+
Sbjct: 146 EALIEGNEQAILH-----------YDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVL 194
Query: 425 KPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGM 484
KPSE++PL+A+ AE+ A P GV N++ G GA G +S H + + FTGST G
Sbjct: 195 KPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254
Query: 485 KIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
I K+A+ + LK+V LELGGK +IF D ++D A++ + F+N G++C + R+ V+
Sbjct: 255 DISKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVE 312
Query: 545 SNIYDAFLE--KVVTEVKKM-------NH------KAHLDKLIDYCEKAKSEGARLLIGG 589
IYD ++ K + E ++ NH K DK+ D + EGA L+ GG
Sbjct: 313 QAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGG 372
Query: 590 KRLD---------RP---GDV------------------------DAVIKRANSTEYGLA 613
L RP DV D + AN TEYGL
Sbjct: 373 TGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLT 432
Query: 614 SGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVD 672
+ I + D +K ++ SG V +N + + + FGG K SG ++ + F+D
Sbjct: 433 NYIQSQDRSKCRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLD 490
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 230/456 (50%), Gaps = 55/456 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
I G++V INP ++S I + A+ DVD A AA+KA + EW+ A +R
Sbjct: 16 LIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA-QAEWAATPAAER 74
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
++++ A+L+E+++EE+ +SG+ + A + ++ + K A + ++ G
Sbjct: 75 SAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHGRIS 133
Query: 374 PI-AHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P + N + K GV G+I+PWN+PL + +AP LA GN VV+KP+ +P+
Sbjct: 134 PSNTPGKENRVYRVAK----GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPV 189
Query: 433 TA-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
T + A + AG P GVI+ + G G+ G+ H + + FTGST G ++ + A
Sbjct: 190 TGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI 249
Query: 492 ESN-LKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
+K V+LELGG +P V+ D ++D A + + G F ++G+ C+S R+ VD+ ++D
Sbjct: 250 NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDE 309
Query: 551 FLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIGGK---RL 592
FLEK V VK + + + L L + E AK EGA + + G RL
Sbjct: 310 FLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL 369
Query: 593 DRP------------------GDVDAVIKR---------ANSTEYGLASGIFTSDINKAM 625
P G + +V+K AN++++GL++ +++ DI++A
Sbjct: 370 VHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429
Query: 626 YFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGK 660
F +IDSG V IN D FGG K SG G+
Sbjct: 430 QFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGR 465
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 226/460 (49%), Gaps = 58/460 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
N+ FING++ G + + +NP ++S I + +A ++ A A+KA + EW++ +
Sbjct: 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKA-QKEWAKSTT 65
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVY---TLALKTHVGMSIDTWKYFAGWCDK 367
DR ++ K + +N++++ + + ++G T+ L+ + + +D + G
Sbjct: 66 EDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAI-LDEAMTYTGELGG 124
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
+ +P + +N + R P+GV I+P+N+P+ + +AP +A GN+VV KP
Sbjct: 125 V--KEVP-SDIEGKTNKIY--RLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 428 EVSPLTA-LKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
+ ++ +A+ AG P GV+N++ G+ + + R + FTGST G I
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+ A + K+++LELGG +P + D ++D+AV ++ G F ++G+ C+ RI V +
Sbjct: 240 GEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQD 298
Query: 547 IYDAFLEKVVTEVKKMNH---------------KAHLDKLIDYCEKAKSEGARLLIGGKR 591
+YD F+EK VK++ + + ++K ++ E+AK++G L + GKR
Sbjct: 299 VYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR 358
Query: 592 LD------------------------------RPGDVDAVIKRANSTEYGLASGIFTSDI 621
+ + G I AN TEYGL+S +FTSD+
Sbjct: 359 VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDL 418
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGK 660
K F +IDSG +N + D FGG K SG G+
Sbjct: 419 EKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 238/501 (47%), Gaps = 72/501 (14%)
Query: 240 LNVNKMDVSFPNQL-FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAE 298
+++ D+ F N++ FI G++V S +++ ++P+ I + D + AL
Sbjct: 1 MSLTVQDLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAE-NALEVA 59
Query: 299 KAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTW 358
+A + W++L+AR R +++ A+ + +NK LA + + G + ++A M +D
Sbjct: 60 QAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-----EMEVDVT 114
Query: 359 KYFAGW-CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLA 417
F + CD L I + + + P GV IT WN+PL + K+ P L
Sbjct: 115 ATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALI 174
Query: 418 AGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFT 477
GNT+V+KP++ +PL +L ++ AG P GV+N++ GTG+V G+ + + + + T
Sbjct: 175 TGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMT 234
Query: 478 GSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCIS 537
GSTV G +I K++AE + V LELGGK+P+V+ DD +LDKA ++ G F N G+ C
Sbjct: 235 GSTVAGKQIYKTSAEY-MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTC 293
Query: 538 AGRIFVDSNIYDAFLEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEG 582
R++V +++YD F+ K + VK + ++ +D + +A +G
Sbjct: 294 VERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQG 353
Query: 583 ARLLIGGKRLDRPG-------------------------------------DVDAVIKRA 605
A + GGK G ++ I+
Sbjct: 354 ATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFC 413
Query: 606 NSTEYGLASGIFT---SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGF-GKD 661
N + YGL++ + T ++IN+A + ++ G V+IN G+KQSGF G+D
Sbjct: 414 NDSIYGLSAYVHTQSFANINQA---ISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGED 470
Query: 662 LDINKAMYFVDKIDSGTVFIN 682
Y K TV+IN
Sbjct: 471 GKFGLEQYLEKK----TVYIN 487
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 217/476 (45%), Gaps = 86/476 (18%)
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPAN-ESTICSVQMANSDDVDIAALAAEKAFEGEWS 306
S+P L I+GE + + + INPAN E + +V A D + A AA KAFE W
Sbjct: 37 SYP--LVIDGERYET--ENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE-TWR 91
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
+R ++F+ + + K E + + ++G + A +ID +Y+A
Sbjct: 92 YTDPEERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEA-DADTAEAIDFMEYYAR--- 147
Query: 367 KILGSTIPIAHARP-------NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAG 419
I +A +P + + +T P GV +I PWN+ +++ + G
Sbjct: 148 ----QMIELAKGKPVNSREGERNQYVYT---PTGVTVVIPPWNFLFAIMAGTTVAPIVTG 200
Query: 420 NTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGS 479
NTVV+KP+ +P+ A K E+ +G PKGV+N +PG+GA G+ + H K + FTGS
Sbjct: 201 NTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGS 260
Query: 480 TVTGMKIMKSAA-----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGEN 534
G +I + AA +++LK+V E+GGK +V+ +D +++ A + F G+
Sbjct: 261 REVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQK 320
Query: 535 CISAGRIFVDSNIYDAFLEKV--VTEVKKMNH-------------KAHLDKLIDYCEKAK 579
C + R V +YD L++V +TE KK+ +A +K++DY E K
Sbjct: 321 CSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGK 380
Query: 580 SEGARLLIGGKRLDRPG---------------------------------DVDAVIKRAN 606
EG RL+ GGK D G D ++ AN
Sbjct: 381 EEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVAN 439
Query: 607 STEYGLASGIFTSD---INKAMYFVDKIDSGTVFINTYNKTDVAA--PFGGFKQSG 657
+TEYGL + T + IN+A + G ++ N + PFGGFK SG
Sbjct: 440 NTEYGLTGAVITKNRDHINRAK---QEFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 216/455 (47%), Gaps = 58/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
++NGE+ + + ++ PA+ + + SV ++++VD +A+KA + W LS +R
Sbjct: 8 YVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA-QPAWRALSYIER 64
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ K+AD++ ++KE++ I S + Y A+ + V + + Y A ++ G +
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 374 PIA--HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K A
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA- 242
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
++ + LELGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 243 --GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 552 LEKVVTEVKKMN-----HKAHLDKLI-----DYCE----KAKSEGARLLIGGKR------ 591
+EK+ +V + A + LI DY E A +GA L KR
Sbjct: 301 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 360
Query: 592 ------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 628 VDKIDSGTVFINTYNKTDVAA---PFGGFKQSGFG 659
++++ GTV IN NKT PF G K+SG G
Sbjct: 421 AEQLEVGTVHIN--NKTQRGTDNFPFLGAKKSGAG 453
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 220/479 (45%), Gaps = 68/479 (14%)
Query: 236 ESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTIC-SVQMANSDDVDIAA 294
E++ L ++ +P L INGE V + ++ NPA + + SV AN D + A
Sbjct: 25 EALGLVEKELGKEYP--LIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAI 80
Query: 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMS 354
+A++AF+ W ++ +R +++ K A ++ + K E + ++G + A +
Sbjct: 81 QSADEAFQ-TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEA 138
Query: 355 IDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAP 414
ID +Y+A ++ ++ + + +T P+GV I+PWN+ L ++
Sbjct: 139 IDFLEYYARQMIELNRGKEILSRPGEQNRYFYT---PMGVTVTISPWNFALAIMVGTAVA 195
Query: 415 CLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKV 474
+ GNTVV+KP+ +P+ A K E+ AG PKGVIN +PG+GA G+ + H K +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255
Query: 475 GFTGSTVTGMKIMKSAA-----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529
FTGS G+++ + AA +++LK+V +E+GGK +V+ D +LD A + F
Sbjct: 256 TFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG 315
Query: 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM----------------NHKAHLDKLID 573
G+ C + R + ++YD LEK V K + + KA +K++
Sbjct: 316 FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKA-FEKIMS 374
Query: 574 YCEKAKSEGARLLIGGK---------------------------------RLDRPGDVDA 600
Y E K EG RL+ GG+ + D D
Sbjct: 375 YIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDH 433
Query: 601 VIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFGGFKQSG 657
++ AN+TEYGL + T + + G ++ N + PFGGFK SG
Sbjct: 434 ALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 216/455 (47%), Gaps = 58/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
++NGE+ + + ++ PA+ + + SV ++++VD +A+KA + W LS +R
Sbjct: 8 YVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA-QPAWRALSYIER 64
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ K+AD++ ++KE++ I S + Y A+ + V + + Y A ++ G +
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 374 PIA--HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
++ L LAE AG P GV N + G G+ G+ I +H + + F+GST G +I K A
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMA- 242
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
++ + LELGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 243 --GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 552 LEKVVTEVKKMN-----HKAHLDKLI-----DYCE----KAKSEGARLLIGGKR------ 591
+EK+ +V + A + LI DY E A +GA L KR
Sbjct: 301 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 360
Query: 592 ------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 628 VDKIDSGTVFINTYNKTDVAA---PFGGFKQSGFG 659
++++ GTV IN NKT PF G K+SG G
Sbjct: 421 AEQLEVGTVHIN--NKTQRGTDNFPFLGAKKSGAG 453
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 215/455 (47%), Gaps = 58/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
++NGE+ + + ++ PA+ + + SV ++++VD +A+KA + W LS +R
Sbjct: 8 YVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA-QPAWRALSYIER 64
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ K+AD++ ++KE++ I S + Y A+ + V + + Y A ++ G +
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 374 PIA--HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K A
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA- 242
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
++ + L LGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 243 --GMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 552 LEKVVTEVKKMN-----HKAHLDKLI-----DYCE----KAKSEGARLLIGGKR------ 591
+EK+ +V + A + LI DY E A +GA L KR
Sbjct: 301 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 360
Query: 592 ------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 628 VDKIDSGTVFINTYNKTDVAA---PFGGFKQSGFG 659
++++ GTV IN NKT PF G K+SG G
Sbjct: 421 AEQLEVGTVHIN--NKTQRGTDNFPFLGAKKSGAG 453
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 213/470 (45%), Gaps = 59/470 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRLSAR 311
+I G + +S GG++ + NPA S I V +DV A A + A W + R
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+ + D +++N+EE+ I + G + A + V + + Y A +
Sbjct: 75 ---KWLEDIRDGLKENREEIGRILCXEHGKPWKEA-QGEVDYAAGFFDYCAKHISALDSH 130
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
TIP +P P+GV GLI PWN+P+ ++ K++ LAAG V+KP+ +P
Sbjct: 131 TIP---EKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETP 187
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
LT + + + P G +N++ G +V G+ + +H + + FTGST G K++ A
Sbjct: 188 LTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTA 247
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
E +KK++LELGG +P ++FDD +L+ A + F G+ C+ A RIFV + DAF
Sbjct: 248 E-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAF 306
Query: 552 LEKVVTEVKKMN---------------HKAHLDKLIDYCEKAKSEGARLLIG------GK 590
+K+ V K +K DK+ + + A +GA L+ G G
Sbjct: 307 GQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGD 366
Query: 591 RLDRPGDV----------------------------DAVIKRANSTEYGLASGIFTSDIN 622
L P V + VI N TE+GLAS +FT+D
Sbjct: 367 GLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAE 426
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVD 672
+A + G V NT APFGG K SG G++ + FV+
Sbjct: 427 RAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVE 476
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 215/455 (47%), Gaps = 58/455 (12%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
++NGE+ + + ++ PA+ + + SV ++++VD +A+KA + W LS +R
Sbjct: 8 YVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA-QPAWRALSYIER 64
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTI 373
+ K+AD++ ++KE++ I S + Y A+ + V + + Y A ++ G +
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 374 PIA--HARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K A
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA- 242
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
++ + LELGGK ++ +D +L+ + + G F G+ + R+ V ++ D
Sbjct: 243 --GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADEL 300
Query: 552 LEKVVTEVKKMN-----HKAHLDKLI-----DYCE----KAKSEGARLLIGGKR------ 591
+EK+ +V + A + LI DY E A +GA L KR
Sbjct: 301 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 360
Query: 592 ------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 628 VDKIDSGTVFINTYNKTDVAA---PFGGFKQSGFG 659
++++ GTV IN NKT PF G K+SG G
Sbjct: 421 AEQLEVGTVHIN--NKTQRGTDNFPFLGAKKSGAG 453
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 214/461 (46%), Gaps = 56/461 (12%)
Query: 248 SFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSR 307
F + NGE+V S G + PA+ + S+ + ++V+ A A+ A + W
Sbjct: 9 QFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA-QKIWKI 67
Query: 308 LSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDK 367
+R L++ ADL+E+ KE + + + A+ V + D ++ A +
Sbjct: 68 RPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALR 126
Query: 368 ILGSTIPIAHARPNSN--FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMK 425
+ G T+ + S+ +REP+GV I+P+NYP+ + + K+AP L GNTVV K
Sbjct: 127 LNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFK 186
Query: 426 PSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMK 485
P+ L+ +K+ E AG P+G+I ++ G G+V G+ + +H I + FTG T TG +
Sbjct: 187 PATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246
Query: 486 IMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
I + A + V LELGGK P ++ DD +L + G F G+ C + R+FV
Sbjct: 247 ISEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQD 303
Query: 546 NIYDAFLEKVVTEVKKMN-----HKAHLDKLID---------YCEKAKSEGARLLIGGKR 591
++ D + + V+++ A + +ID + A GA LL G KR
Sbjct: 304 SVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR 363
Query: 592 ---------LD---------------------RPGDVDAVIKRANSTEYGLASGIFTSDI 621
LD R D + I +N ++YGL + IFT D
Sbjct: 364 QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDT 423
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAA---PFGGFKQSGFG 659
++A+ ++ GTV IN KT+ PF G K+SG G
Sbjct: 424 DRAINIGKHLEVGTVHINA--KTERGPDHFPFLGVKKSGLG 462
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 211/486 (43%), Gaps = 62/486 (12%)
Query: 226 QGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMA 285
Q + + + E+++ + +P L+I GE+V++ M +NP+ S +
Sbjct: 15 QTEEARRAMREALRRVREEFGRHYP--LYIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 286 NSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345
AAL A W DR L+ K A LM + K EL + G +
Sbjct: 71 AGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE 130
Query: 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405
A V +ID +Y+A + + + N +F P+G +I PWN+P+
Sbjct: 131 A-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPV 187
Query: 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
+ + + +A GNTV+ KP+E + + K+ E+ AGFP GV+N LPG G G +
Sbjct: 188 AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYL 247
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSA-----AESNLKKVSLELGGKSPLVIFDDYNLDKAV 520
+H +IR + FTGS G+KI ++A ++ K+ +E GGK+ +++ + + D A
Sbjct: 248 VEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAA 307
Query: 521 RMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--------------HKA 566
+ + +G+ C +A R+ + Y+ LE+V+ ++++
Sbjct: 308 EGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 567 HLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------------ 596
K++ Y E K+EG +L++GGKRL+ G
Sbjct: 368 QERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
Query: 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFG 651
D ++ AN T YGL G+++ + + G ++ N + PFG
Sbjct: 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFG 486
Query: 652 GFKQSG 657
GFK SG
Sbjct: 487 GFKLSG 492
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 210/486 (43%), Gaps = 62/486 (12%)
Query: 226 QGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMA 285
Q + + + E+++ + +P L+I GE+V++ M +NP+ S +
Sbjct: 15 QTEEARRAMREALRRVREEFGRHYP--LYIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 286 NSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345
AAL A W DR L+ K A LM + K EL + G +
Sbjct: 71 AGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE 130
Query: 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405
A V +ID +Y+A + + + N +F P+G +I PWN+P+
Sbjct: 131 A-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPV 187
Query: 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
+ + + +A GNTV+ KP+E + + K+ E+ AGFP GV+N LPG G G +
Sbjct: 188 AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYL 247
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSA-----AESNLKKVSLELGGKSPLVIFDDYNLDKAV 520
+H +IR + FTGS G+KI ++A ++ K+ +E GGK +++ + + D A
Sbjct: 248 VEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAA 307
Query: 521 RMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--------------HKA 566
+ + +G+ C +A R+ + Y+ LE+V+ ++++
Sbjct: 308 EGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 567 HLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------------ 596
K++ Y E K+EG +L++GGKRL+ G
Sbjct: 368 QERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
Query: 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFG 651
D ++ AN T YGL G+++ + + G ++ N + PFG
Sbjct: 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFG 486
Query: 652 GFKQSG 657
GFK SG
Sbjct: 487 GFKLSG 492
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 209/486 (43%), Gaps = 62/486 (12%)
Query: 226 QGDVSNQLNHESIKLNVNKMDVSFPNQLFINGEFVNSVGGSSMECINPANESTICSVQMA 285
Q + + + E+++ + +P L+I GE+V++ M +NP+ S +
Sbjct: 15 QTEEARRAMREALRRVREEFGRHYP--LYIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 286 NSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTL 345
AAL A W DR L+ K A LM + K EL + G +
Sbjct: 71 AGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE 130
Query: 346 ALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPL 405
A V +ID +Y+A + + + N +F P+G +I PWN+P+
Sbjct: 131 A-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV--PLGAGVVIAPWNFPV 187
Query: 406 MMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAI 465
+ + + +A GNTV+ KP+E + + K+ E+ AGFP GV+N LPG G G +
Sbjct: 188 AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYL 247
Query: 466 SQHLKIRKVGFTGSTVTGMKIMKSA-----AESNLKKVSLELGGKSPLVIFDDYNLDKAV 520
+H +IR + FTGS G+KI ++A ++ K+ +E GGK +++ + + D A
Sbjct: 248 VEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAA 307
Query: 521 RMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN--------------HKA 566
+ + +G+ +A R+ + Y+ LE+V+ ++++
Sbjct: 308 EGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 567 HLDKLIDYCEKAKSEGARLLIGGKRLDRPG------------------------------ 596
K++ Y E K+EG +L++GGKRL+ G
Sbjct: 368 QERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426
Query: 597 ---DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFG 651
D ++ AN T YGL G+++ + + G ++ N + PFG
Sbjct: 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFG 486
Query: 652 GFKQSG 657
GFK SG
Sbjct: 487 GFKLSG 492
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 211/463 (45%), Gaps = 64/463 (13%)
Query: 253 LFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIA-ALAAEKAFEGEWSRLSAR 311
LFING+ V + + +NP S + Q+ + ++ A+AA KA W R
Sbjct: 534 LFINGKEVRT--NDLIPTVNPNKPSEVLG-QICQAGTTEVGDAIAAAKAAFPAWRDTDPR 590
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
R + K A + EL+ + L+ G + A V +ID +Y+A + LG
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIR-LGQ 648
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+ HA N F EP GV +I PWN+PL + + + GN VV KPS ++
Sbjct: 649 PQRVGHAPGELNHYFY--EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITS 706
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
+ L EL AG P+GV N PG G+V G+ + H I + FTGS TG++I++ AA
Sbjct: 707 IIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAA 766
Query: 492 -----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
++N+KK+ E+GGK+ ++I DD +LD+AV + F +G+ C + R+ V
Sbjct: 767 KVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDA 826
Query: 547 IYDAFLEKVVTEVKKM----------------NHKAHLDKLIDYCEKAKSEGARL----- 585
+YD F+E++V+ K + KA + + +Y E K EG L
Sbjct: 827 VYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKA-MKSIKEYAEIGKREGHVLYESPV 885
Query: 586 -----------LIGGKRLD----------------RPGDVDAVIKRANSTEYGLASGIFT 618
+IGG + + R D D I+ ANST++ L GIF+
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVA--APFGGFKQSGFG 659
+ G ++IN N + PFGG + SG G
Sbjct: 946 RSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVG 988
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 190/443 (42%), Gaps = 62/443 (13%)
Query: 271 INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEE 330
+NPA T+ + AN+ +++ A A F+ +W S R + + + + EE
Sbjct: 12 VNPATGQTLAAXPWANAQEIEHALSLAASGFK-KWKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 331 LATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKRE 390
A + + G A + V S ++A L + N R
Sbjct: 71 XAQCITREXGKPIKQA-RAEVTKSAALCDWYAEHGPAXLNPEPTLVE---NQQAVIEYR- 125
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGV 450
P+GV I PWN+PL + P L AGN+ ++K + A +A + AG P GV
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 451 INILPGTGAVTGEAISQHL---KIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSP 507
G E +SQ + +I V TGS V + + A + LKK LELGG P
Sbjct: 186 Y----GWVNANNEGVSQXINDPRIAAVTVTGS-VRAGAAIGAQAGAALKKCVLELGGSDP 240
Query: 508 LVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAH 567
++ +D +L+ AV+ ++ G + N G+ C +A R V+ I AF ++ V +
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDP 300
Query: 568 L---------------DKLIDYCEKAKSEGARLLIGGKRLDRPG---------------- 596
L D+L + + +EGARLL+GG+++ G
Sbjct: 301 LVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXT 360
Query: 597 -----------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639
D + AN +E+GL++ IFT+D A +++ G VFIN
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN 420
Query: 640 TYNKTDVAAPFGGFKQSGFGKDL 662
Y+ +D FGG K+SGFG++L
Sbjct: 421 GYSASDARVAFGGVKKSGFGREL 443
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 211/464 (45%), Gaps = 78/464 (16%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
+I G+++ G ++E ++P + + S + A++ VD A AA +AF W+R R
Sbjct: 9 YIAGQWLAGQG-ETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA-WARRPLEQR 66
Query: 314 GHLMFKLADLMEQNKEELATIESLDSG------AVYTLALKTHVGMSIDTWKYFAGWCDK 367
L+ + A ++ +ELA + ++G A + V +S+ ++ G +K
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTG--EK 124
Query: 368 ILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPS 427
+ P+A A + +P GV + P+N+P + + + P L AGN VV KPS
Sbjct: 125 ----SGPLADAT-----AVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPS 175
Query: 428 EVSPLTALKLAELS----VRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTG 483
E++P K+AEL+ ++AG P GV+N++ G G TG A++ H + + FTGS+ TG
Sbjct: 176 ELTP----KVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTG 230
Query: 484 MKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFV 543
+ K ++LE GG +PLV+ + +LD AV + F + G+ C A R+ V
Sbjct: 231 NLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLV 290
Query: 544 DSNIY-DAFLEKVVT-------------------EVKKMNHKAHLDKLIDY--------- 574
+ DA L ++V V ++ HL K ++
Sbjct: 291 PQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPL 350
Query: 575 -CEKAKSEGARLLIGG--------KRLD-----------RPGDVDAVIKRANSTEYGLAS 614
+GA LL G +R D R D A I+ AN+T+YGLA+
Sbjct: 351 LAXTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAA 410
Query: 615 GIFTSDINKAMYFVDKIDSGTVFIN-TYNKTDVAAPFGGFKQSG 657
G+ + + F+ + +G V N +APFGG SG
Sbjct: 411 GLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASG 454
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 206/466 (44%), Gaps = 80/466 (17%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSR--LSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K G WS +
Sbjct: 22 YLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFK--RGRWSARDMPGT 77
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A+ V ++D + KI G
Sbjct: 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGD 136
Query: 372 TIPIAHARPNSNFTF--------TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
IP ++T+ +REP+GV ITP+NYPL K+ GN VV
Sbjct: 137 YIP-------GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINI--LPGTGAVTGEAISQHLKIRKVGFTGSTV 481
+KPS PL A + + AGFP I + LPG A E I ++ V FTGST
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEA---EKIVADDRVAAVSFTGSTE 246
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
G +++K +K+ +ELGG P ++ +D +LD A G++ G+ C + +
Sbjct: 247 VGERVVKV---GGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV 303
Query: 542 FVDSNIYDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLL 586
+ +Y +E+V +V + + +D+++ E A +G R+L
Sbjct: 304 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 363
Query: 587 IGGKRL----------DRPG------------------------DVDAVIKRANSTEYGL 612
GG+RL + P D+D I+ AN YGL
Sbjct: 364 AGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGL 423
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSG 657
+ +F D+ K V ++ G ++IN + + PFGG K+SG
Sbjct: 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSG 469
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 206/466 (44%), Gaps = 80/466 (17%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSR--LSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K G WS +
Sbjct: 22 YLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFK--RGRWSARDMPGT 77
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A+ V ++D + KI G
Sbjct: 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGD 136
Query: 372 TIPIAHARPNSNFTF--------TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
IP ++T+ +REP+GV ITP+NYPL K+ GN VV
Sbjct: 137 YIP-------GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINI--LPGTGAVTGEAISQHLKIRKVGFTGSTV 481
+KPS PL A + + AGFP I + LPG A E I ++ V FTGST
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEA---EKIVADDRVAAVSFTGSTE 246
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
G +++K +K+ +ELGG P ++ +D +LD A G++ G+ C + +
Sbjct: 247 VGERVVKV---GGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV 303
Query: 542 FVDSNIYDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLL 586
+ +Y +E+V +V + + +D+++ E A +G R+L
Sbjct: 304 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 363
Query: 587 IGGKRL----------DRPG------------------------DVDAVIKRANSTEYGL 612
GG+RL + P D+D I+ AN YGL
Sbjct: 364 AGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGL 423
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSG 657
+ +F D+ K V ++ G ++IN + + PFGG K+SG
Sbjct: 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSG 469
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 218/483 (45%), Gaps = 68/483 (14%)
Query: 240 LNVNKMDVSFPNQLFIN----GEFVNSVGGSS--MECINPANESTICSVQMANSDDVDIA 293
L +N+ S+ +L ++ G + S GGS + PAN I V A + +
Sbjct: 3 LLINQPKYSWLKELGLSEDNPGVYNGSWGGSGEVITSYCPANNEPIARVTQATLAEYEET 62
Query: 294 ALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGM 353
+A++ W+ + A RG ++ ++ D + + + L ++ SL+ G +Y + V
Sbjct: 63 VQKTREAWK-MWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVG-EVQE 120
Query: 354 SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMA 413
+D Y G I G +P RP + P+G+ G+IT +N+P+ + W A
Sbjct: 121 YVDVCDYAVGLSRMIGGPVLP--SERPGHAL-IEQWNPVGLVGIITAFNFPVAVYGWNNA 177
Query: 414 PCLAAGNTVVMKPSEVSPLTALK----LAELSVRAGFPKGVINILPGTGAVTGEAISQHL 469
L GN + K + +PLT++ +AE+ + P + ++ G GA G A+++
Sbjct: 178 IALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCG-GADIGTAMAKDE 236
Query: 470 KIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529
++ + FTGST G K++ + + LELGG + +++F+D +L+ V ++
Sbjct: 237 RVDLLSFTGSTHVG-KMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVG 295
Query: 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVKK---------------MNHKAHLDKLIDY 574
G+ C + R+ + +++DA +E++ K+ ++ K +D+ +
Sbjct: 296 TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAA 355
Query: 575 CEKAKSEGARLLIGGKRLDRPGDV-----------DAVIKRA------------------ 605
E+AK +G L+ GGK +DRPG+ DA I
Sbjct: 356 IEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEA 415
Query: 606 ----NSTEYGLASGIFTSDINKAMYFVDK--IDSGTVFIN-TYNKTDVAAPFGGFKQSGF 658
N + GL+S IFT D+ + ++ D G V +N + ++ FGG K +G
Sbjct: 416 FAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGG 475
Query: 659 GKD 661
G++
Sbjct: 476 GRE 478
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 206/466 (44%), Gaps = 80/466 (17%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSR--LSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K G WS +
Sbjct: 22 YLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFK--RGRWSARDMPGT 77
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A+ V ++D + KI G
Sbjct: 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGD 136
Query: 372 TIPIAHARPNSNFTF--------TKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
IP ++T+ +REP+GV ITP+NYPL K+ GN VV
Sbjct: 137 YIP-------GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINI--LPGTGAVTGEAISQHLKIRKVGFTGSTV 481
+KPS PL A + + AGFP I + LPG A E I ++ V FTGST
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEA---EKIVADDRVAAVSFTGSTE 246
Query: 482 TGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
G +++K +K+ +ELGG P ++ +D +LD A G++ G+ C + +
Sbjct: 247 VGERVVKV---GGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV 303
Query: 542 FVDSNIYDAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLL 586
+ +Y +E+V +V + + +D+++ E A +G R+L
Sbjct: 304 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 363
Query: 587 IGGKRL----------DRPG------------------------DVDAVIKRANSTEYGL 612
GG+RL + P D+D I+ AN YGL
Sbjct: 364 AGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGL 423
Query: 613 ASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSG 657
+ +F D+ K V ++ G ++IN + + PFGG K+SG
Sbjct: 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSG 469
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 192/448 (42%), Gaps = 62/448 (13%)
Query: 266 SSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLME 325
S + +NP S S +D A+ A +W R ++ +A+ ++
Sbjct: 4 SKYQSVNPYTNEAFASYDNPTSKQID-EAINLAHALYKKWRHEEPASRAEILHDIANALK 62
Query: 326 QNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNF- 384
++++ELA +L+ G + + + K V + + Y+A + L T + NS+
Sbjct: 63 EHEDELAKXXTLEXGKLLSES-KEEVELCVSICNYYADHGPEXLKPT------KLNSDLG 115
Query: 385 -TFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVR 443
+ ++ GV PWN+PL + AP GN +++K + P +A A++ R
Sbjct: 116 NAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKR 175
Query: 444 AGFPKG-VINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLEL 502
AG P+G +IN+ P + I +I+ V TGS G + ++A + NLKK + EL
Sbjct: 176 AGAPEGSLINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXEL 232
Query: 503 GGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVV------ 556
GG ++ DD + + +N G+ C S+ RI V+ + YD L ++
Sbjct: 233 GGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNL 292
Query: 557 ---------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG----------- 596
T + N + +KL ++A GA++ +D G
Sbjct: 293 KAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDI 352
Query: 597 ----------------------DVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDSG 634
D +A I+ AN + YGL S + SDI++A +I++G
Sbjct: 353 AKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETG 412
Query: 635 TVFINTYNKTDVAAPFGGFKQSGFGKDL 662
IN T PFGG K+SG+G++L
Sbjct: 413 XTVINGRWITSGELPFGGIKKSGYGREL 440
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 207/478 (43%), Gaps = 86/478 (17%)
Query: 254 FINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDR 313
FI+G+ V G NPA +V +A+ D+ A +A+ A + +W+ + + R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAA-QPKWAATNPQRR 88
Query: 314 GHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHV-GMSIDTWKYFAGWCDKILGST 372
+ K L+ N ELA S + G A V G+ + C+ ++G
Sbjct: 89 ARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEV---------CEFVIG-- 137
Query: 373 IPIAHARPNSNFT---------FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
I H + S FT ++ R+P+G+ ITP+N+P + W AP +A GN +
Sbjct: 138 --IPHLQ-KSEFTEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFI 194
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPG-TGAVTGEAISQHLKIRKVGFTGSTVT 482
+KPSE P ++LAEL + AG P G++N++ G GAV +AI H I V F GST
Sbjct: 195 LKPSERDPSVPIRLAELXIEAGLPAGILNVVNGDKGAV--DAILTHPDIAAVSFVGSTPI 252
Query: 483 GMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAG-RI 541
+ +AA N K+ G K+ +I D +LD+A +G + + GE C + +
Sbjct: 253 ARYVYGTAA-XNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAV 311
Query: 542 FVDSNIYDAFLEKVVTEVKKMNHKAHLDKLID---------------YCEKAKSEGARLL 586
V + ++K+V V+ + + D+ D + +GA+L+
Sbjct: 312 PVGEETANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLV 371
Query: 587 IGGK----------------------------RLDRPGDVDAVIKRAN---------STE 609
+ G+ + + G V +V++ N E
Sbjct: 372 VDGRDFKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHE 431
Query: 610 YGLASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDLDINK 666
YG I+T D + A F +I+ G V +N +A FGG+K S FG D+N+
Sbjct: 432 YGNGVAIYTRDGDAARDFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFG---DLNQ 486
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 197/444 (44%), Gaps = 62/444 (13%)
Query: 273 PANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELA 332
PAN I V+ A+ D + A +A++ W+ + A RG ++ ++ D + + + L
Sbjct: 44 PANNEPIARVRQASVADYEETVKKAREAWK-IWADIPAPKRGEIVRQIGDALREKIQVLG 102
Query: 333 TIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPI 392
++ SL+ G + + V +D Y G I G PI + + + + P+
Sbjct: 103 SLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGG---PILPSERSGHALIEQWNPV 158
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA----GFPK 448
G+ G+IT +N+P+ + W A + GN + K + + L ++ + ++ + P
Sbjct: 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPG 218
Query: 449 GVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPL 508
+ ++ G GA G A+++ ++ + FTGST G ++ E + LELGG + +
Sbjct: 219 AICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGGNNAI 276
Query: 509 VIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF---LEKVVTEVK----- 560
+ F+D +L V ++ G+ C +A R+F+ +I+D L+K +++
Sbjct: 277 IAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336
Query: 561 -------KMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPGDV-----------DAVI 602
++ K + + E+AK EG ++ GGK +DRPG+ DA I
Sbjct: 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASI 396
Query: 603 KRA----------------------NSTEYGLASGIFTSDINKAMYFVDK--IDSGTVFI 638
N + GL+S IFT D+ + ++ D G V +
Sbjct: 397 AHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNV 456
Query: 639 N-TYNKTDVAAPFGGFKQSGFGKD 661
N + ++ FGG K +G G++
Sbjct: 457 NIPTSGAEIGGAFGGEKHTGGGRE 480
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 197/430 (45%), Gaps = 47/430 (10%)
Query: 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMS 354
+A+KA+ + R + +L + + NKE L + + D G + +G
Sbjct: 34 FSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93
Query: 355 IDTWKYFAGWCDKILGSTIPIAHARPN---SNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
+ + D+ + P++ P+ + + +EP GV +I P+NYP+ +
Sbjct: 94 LHEIDFALAHLDEWVA---PVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTP 150
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
+ + GNT ++KPSE +P T+ + ++ A P+ + ++ G +S L
Sbjct: 151 LIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPE-YVAVIQGGRDENSHLLS--LPF 207
Query: 472 RKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNK 531
+ FTGS G +M++AA+ +L V LELGGK PL++ D +LD+ V M G F N
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINS 266
Query: 532 GENCISAGRIFVDSNIYDAFLEKVVTEVK----------KMNHKAHLDKLIDYCEKAKSE 581
G+ CI+ ++V ++ DA LE++V VK K+ + + +L+ E +
Sbjct: 267 GQTCIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQ-- 324
Query: 582 GARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGI------FTSDINKAMYFVDKIDSGT 635
++L+G + DV KRA S + G+ + ++ + V + DS
Sbjct: 325 -GQVLVGSQ-----ADVS---KRALSAT--VVDGVEWNDPLMSEELFGPILPVLEFDSVR 373
Query: 636 VFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPF 693
I+ NK P + FGKD+D+ K + +++I SG +N + PF
Sbjct: 374 TAIDQVNKHH-PKPLAVYV---FGKDMDVAKGI--INQIQSGDAQVNGVMLHAFSPYLPF 427
Query: 694 GGFKQSGFGK 703
GG SG G+
Sbjct: 428 GGIGASGMGE 437
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 196/430 (45%), Gaps = 47/430 (10%)
Query: 295 LAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMS 354
+A+KA+ + R + +L + + NKE L + + D G + +G
Sbjct: 34 FSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93
Query: 355 IDTWKYFAGWCDKILGSTIPIAHARPN---SNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
+ + D+ + P++ P+ + + +EP GV +I P+NYP+ +
Sbjct: 94 LHEIDFALAHLDEWVA---PVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTP 150
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
+ + GNT ++KPSE +P T+ + ++ A P+ + ++ G +S L
Sbjct: 151 LIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPE-YVAVIQGGRDENSHLLS--LPF 207
Query: 472 RKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNK 531
+ FTGS G +M++AA+ +L V LELGGK PL++ D +LD+ V M G F N
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINS 266
Query: 532 GENCISAGRIFVDSNIYDAFLEKVVTEVK----------KMNHKAHLDKLIDYCEKAKSE 581
G+ I+ ++V ++ DA LE++V VK K+ + + +L+ E +
Sbjct: 267 GQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQ-- 324
Query: 582 GARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGI------FTSDINKAMYFVDKIDSGT 635
++L+G + DV KRA S + G+ + ++ + V + DS
Sbjct: 325 -GQVLVGSQ-----ADVS---KRALSAT--VVDGVEWNDPLMSEELFGPILPVLEFDSVR 373
Query: 636 VFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPF 693
I+ NK P + FGKD+D+ K + +++I SG +N + PF
Sbjct: 374 TAIDQVNKHH-PKPLAVYV---FGKDMDVAKGI--INQIQSGDAQVNGVMLHAFSPYLPF 427
Query: 694 GGFKQSGFGK 703
GG SG G+
Sbjct: 428 GGIGASGMGE 437
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 173/430 (40%), Gaps = 59/430 (13%)
Query: 305 WSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGW 364
WSR A R + + A L+E + + G AL + + + D +Y+A
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQ 624
Query: 365 CDKILGSTIPIAHARPNSN-FTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVV 423
K+ GS + SN T R GV I+PWN+PL + ++ L AGN+VV
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRGR---GVFVAISPWNFPLAIFLGQVTAALMAGNSVV 681
Query: 424 MKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTG 483
KP+E +P A + L AG PK + ++ G G + G A++ H I V FTGST
Sbjct: 682 AKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVA 740
Query: 484 MKIMKSAAESNLKKVSL--ELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRI 541
I ++ A + V L E GG + ++ ++ + F + G+ C + +
Sbjct: 741 RSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLL 800
Query: 542 FVDSNIYDAFLEKVVTEVKKM------NHKAHLDKLID---------YCEKAKSEGARLL 586
FV ++ D +E V +++ + H+ +ID + + K+E ARL
Sbjct: 801 FVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE-ARLH 859
Query: 587 IGGKRLD-------------------------------RPGDVDAVIKRANSTEYGLASG 615
G + RP +++ V++ T YGL G
Sbjct: 860 FAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLG 919
Query: 616 IFTSDINKAMYFVDKIDSGTVFINTYNKTDVAA--PFGGFKQSGFGKDLDINKAMYFVDK 673
+ + + +D++ G +++N V PFGG SG G Y
Sbjct: 920 VHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP--KAGGPHYLARF 977
Query: 674 IDSGTVFINT 683
TV INT
Sbjct: 978 ATEQTVTINT 987
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 374 PIAHARP-NSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P+A R + + EP+GV +I WNYP + M +AAGN V++KPSEVS
Sbjct: 85 PVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGH 144
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
A LA L + + + ++ G T E + + + + +TGST G KI+ +AA
Sbjct: 145 MADLLATL-IPQYMDQNLYLVVKGGVPETTELLKE--RFDHIMYTGSTAVG-KIVMAAAA 200
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+L V+LELGGKSP + D +LD A R G F N G+ C++ I D +I + +
Sbjct: 201 KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIV 260
Query: 553 EKVVTEVK 560
EK+ +K
Sbjct: 261 EKLKKSLK 268
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 168/397 (42%), Gaps = 77/397 (19%)
Query: 302 EGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGM-SIDTWKY 360
+ W L R + + + +E+L D+G + L+ + SID W
Sbjct: 41 QSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITVLEIDSFLASIDRW-- 98
Query: 361 FAGWCDKILGSTIPIAHARPNSNFTFTKRE----PIGVCGLITPWNYPLMMLSWKMAPCL 416
G ++L ++ N++ F + P + G+I+PWN+PL + P L
Sbjct: 99 -CGLAPELLQTSAK------NTSIPFIALQQSLVPYPLVGVISPWNFPLTLSXIDTIPAL 151
Query: 417 AAGNTVVMKPSEVSP-LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVG 475
AG VV+KPSE++P A L L+ + V+ + G G TG + ++ V
Sbjct: 152 LAGCAVVVKPSEIAPRFVAPLLXALNTVPEL-RDVLIFVEG-GGETGANLINYVDF--VC 207
Query: 476 FTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENC 535
FTGS TG ++ ++AA + LELGGK P ++ + NL+ A + G N G++C
Sbjct: 208 FTGSVATGREVAETAARRFIPAY-LELGGKDPAIVLESANLELATSAILWGAVVNTGQSC 266
Query: 536 ISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHL-------------------DKLIDYCE 576
+S RI+V + ++ F +++ + ++ L D ++D E
Sbjct: 267 LSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVE 326
Query: 577 KAKSEGARLLIGGKRLD-------RP---------------------------GDVDAVI 602
K GA + GGK + RP DV+ +
Sbjct: 327 K----GAVIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAV 382
Query: 603 KRANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFIN 639
AN T YGL++ +F ++A+ ++++G + IN
Sbjct: 383 YLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN 419
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 386 FTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG 445
+ EP+GV +I WNYP + M +AAGN VV+KPSE+S A LA + +
Sbjct: 115 YIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQY 173
Query: 446 FPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGK 505
K + ++ G T E + + + + +TGST G KI+ +AA +L V+LELGGK
Sbjct: 174 LDKDLYPVINGGVPETTELLKE--RFDHILYTGSTGVG-KIIMTAAAKHLTPVTLELGGK 230
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKK 561
SP + + +LD A R G F N G+ C++ I D +I + +EK+ +K+
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKE 286
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 183/435 (42%), Gaps = 42/435 (9%)
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHV 351
AALAA K EW DR + K AD++ + E+ + G A
Sbjct: 111 AALAARK----EWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAA 166
Query: 352 GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
ID +++ A + ++ G PI+ P++N T R G I+P+N+ + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQ-PIS-VPPSTNST-VYRGLEGFVAAISPFNFTAIGGNLA 223
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
AP L GN V+ KPS+ + L + + + AG P +I +P G + G+ ++ +
Sbjct: 224 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHL 282
Query: 472 RKVGFTGSTVTGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGG 526
+ FTGS T + K A++ +++ E GGK+ + +++ V ++
Sbjct: 283 CGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRS 342
Query: 527 VFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------NHKAHLDKLID------ 573
F G+ C + R++V +++ +++ E ++ + +ID
Sbjct: 343 AFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFAR 402
Query: 574 ---YCEKAKSEGA-RLLIGGKRLDRPGDV--DAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ E A+S + +L GGK D G +++ + E + IF ++ +Y
Sbjct: 403 IKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYP 462
Query: 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKT 687
DK + T D + G + F +D D+ + V + +G +IN +
Sbjct: 463 DDK------YKETLQLVDSTTSY-GLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTG 515
Query: 688 DVAA--PFGGFKQSG 700
+ PFGG + SG
Sbjct: 516 SIVGQQPFGGARASG 530
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 183/435 (42%), Gaps = 42/435 (9%)
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHV 351
AALAA K EW DR + K AD++ + E+ + G A
Sbjct: 111 AALAARK----EWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAA 166
Query: 352 GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
ID +++ A + ++ G PI+ P++N T R G I+P+N+ + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQ-PIS-VPPSTNST-VYRGLEGFVAAISPFNFTAIGGNLA 223
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
AP L GN V+ KPS+ + L + + + AG P +I +P G + G+ ++ +
Sbjct: 224 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHL 282
Query: 472 RKVGFTGSTVTGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGG 526
+ FTGS T + K A++ +++ E GGK+ + +++ V ++
Sbjct: 283 CGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRS 342
Query: 527 VFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------NHKAHLDKLID------ 573
F G+ C + R++V +++ +++ E ++ + +ID
Sbjct: 343 AFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFAR 402
Query: 574 ---YCEKAKSEGA-RLLIGGKRLDRPGDV--DAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ E A+S + +L GGK D G +++ + E + IF ++ +Y
Sbjct: 403 IKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYP 462
Query: 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKT 687
DK + T D + G + F +D D+ + V + +G +IN +
Sbjct: 463 DDK------YKETLQLVDSTTSY-GLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTG 515
Query: 688 DVAA--PFGGFKQSG 700
+ PFGG + SG
Sbjct: 516 SIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 183/435 (42%), Gaps = 42/435 (9%)
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHV 351
AALAA K EW DR + K AD++ + E+ + G A
Sbjct: 111 AALAARK----EWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAA 166
Query: 352 GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
ID +++ A + ++ G PI+ P++N T R G I+P+N+ + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQ-PIS-VPPSTNST-VYRGLEGFVAAISPFNFTAIGGNLA 223
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
AP L GN V+ KPS+ + L + + + AG P +I +P G + G+ ++ +
Sbjct: 224 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHL 282
Query: 472 RKVGFTGSTVTGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGG 526
+ FTGS T + K A++ +++ E GGK+ + +++ V ++
Sbjct: 283 CGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRS 342
Query: 527 VFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKM-------NHKAHLDKLID------ 573
F G+ C + R++V +++ +++ E ++ + +ID
Sbjct: 343 AFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFAR 402
Query: 574 ---YCEKAKSEGA-RLLIGGKRLDRPGDV--DAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ E A+S + +L GGK D G +++ + E + IF ++ +Y
Sbjct: 403 IKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYP 462
Query: 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKT 687
DK + T D + G + F +D D+ + V + +G +IN +
Sbjct: 463 DDK------YKETLQLVDSTTSY-GLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTG 515
Query: 688 DVAA--PFGGFKQSG 700
+ PFGG + SG
Sbjct: 516 SIVGQQPFGGARASG 530
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 181/435 (41%), Gaps = 42/435 (9%)
Query: 293 AALAAEKAFEGEWSRLSARDRGHLMFKLADLME-QNKEELATIESLDSGAVYTLALKTHV 351
AALAA K EW DR + K AD++ + E+ + G A
Sbjct: 108 AALAARK----EWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAA 163
Query: 352 GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWK 411
ID +++ A + ++ G PI+ P++N T R G I+P+N+ + +
Sbjct: 164 AELIDFFRFNAKFAVELEGEQ-PIS-VPPSTNHT-VYRGLEGFVAAISPFNFTAIGGNLA 220
Query: 412 MAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKI 471
AP L GN V+ KPS+ + L + + + AG P +I +P G G+ ++ +
Sbjct: 221 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHL 279
Query: 472 RKVGFTGSTVTGMKIMKSAAES-----NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGG 526
+ FTGS T + + A++ +++ E GGK+ + ++D V ++
Sbjct: 280 CGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRS 339
Query: 527 VFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN-----------HKAHLD-----K 570
F G+ C + R++V +++ +++ E ++ A +D +
Sbjct: 340 AFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFAR 399
Query: 571 LIDYCEKAKSEGA-RLLIGGKRLDRPGDV--DAVIKRANSTEYGLASGIFTSDINKAMYF 627
+ + E A+S + +L GG+ + G +I+ + E + IF + +Y
Sbjct: 400 IKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459
Query: 628 VDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDLDINKAMYFVDKIDSGTVFINTYNKT 687
DK + T D + G + F +D I + + + +G +IN +
Sbjct: 460 DDK------YRETLKLVDSTTSY-GLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTG 512
Query: 688 DVAA--PFGGFKQSG 700
V PFGG + SG
Sbjct: 513 SVVGQQPFGGARASG 527
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 33/349 (9%)
Query: 254 FINGEFVNSVGG-SSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSR--LSA 310
+ GE+++ G +S PA++ + +V++ N A AAE+AF W+ S
Sbjct: 33 LVAGEWLDGAGTFASAPAHGPAHDFAVGTVELVNR-----ACEAAEEAF---WTYGYSSR 84
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAG------W 364
++R + +AD +E E + I S ++G + L G + + FA +
Sbjct: 85 KERAAFLRAIADEIEARAEAITEIGSQETG-LPEARLNGERGRTTGQLRLFADHIEKGDY 143
Query: 365 CDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS--WKMAPCLAAGNTV 422
D+ + + P P +R P+G + N+PL + A LAAG V
Sbjct: 144 LDRRVDAAXPERQPAPRQEIRLVQR-PVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPV 202
Query: 423 VMKPSEVSPLTALKLAEL---SVR-AGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTG 478
V+K P T +AE ++R G GV +++ G G A+ QH I+ VGFTG
Sbjct: 203 VVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTG 262
Query: 479 STVTGMKIMK-SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSM---GGVFFNKGEN 534
S G + AA ELG +P + + +A + G + G+
Sbjct: 263 SLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQF 322
Query: 535 CISAG-RIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDYCEKAKSEG 582
C + G + ++ D F V + K+ A L D KA +G
Sbjct: 323 CTNPGIAVVIEGADADRFTTAAVEALAKV---APQTXLTDGIAKAYRDG 368
>pdb|2CQ8|A Chain A, Solution Structure Of Rsgi Ruh-033, A Pp-Binding Domain Of
10-Fthfdh From Human Cdna
Length = 110
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 146 LVLTESEEAIIPVLKTIWAGILNS--EVSEDTDFFQSGAGSMDVVRLIEEIKENLQ-ITL 202
L LTE+E ++++W IL EV + TDFF+SGA S+DVVRL+EE+KE + L
Sbjct: 17 LELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLEL 76
Query: 203 QNEDVLMSSVFRDFYIKVIEVSRQGD 228
+NEDV M+S F DF I+++ +GD
Sbjct: 77 ENEDVYMASTFGDF-IQLLVRKLRGD 101
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 304 EWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFA- 362
++ RL+ R L+ +A +E +++ L++ A+ + L + + + + FA
Sbjct: 45 DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET-ALPEVRLTGEIARTANQLRLFAD 103
Query: 363 -----GWCDKILGSTIPIAHARPNSNFTFTKREPI--GVCGLITPWNYPLMMLSW--KMA 413
+ IL + P P + +R+ I G + N+PL + A
Sbjct: 104 VVNSGSYHQAILDTPNPTRAPLPKPDI---RRQQIALGPVAVFGASNFPLAFSAAGGDTA 160
Query: 414 PCLAAGNTVVMKPSEVSPLTALKLAELSVRA----GFPKGVINILPGTGAVTGEAISQHL 469
LAAG V++K P T+ +AE +A P+ + +L G G+A+ H
Sbjct: 161 SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHP 220
Query: 470 KIRKVGFTGSTVTGMKIMKSAAESNLKKVSL--ELGGKSPLVIFDDYNLDKA-------V 520
+I+ VGFTGS V G + + + A + + ELG +P IF KA
Sbjct: 221 EIKAVGFTGS-VGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVA 279
Query: 521 RMSMGGVFFNKGENCISAGRIF-VDSNIYDAFLEKVVTEVKKMN 563
M+MG G+ C G +F +++ AF+E + +++ +
Sbjct: 280 SMTMGC-----GQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 385 TFTKREPIGV-CGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP---SEVSPLTALKLA-E 439
T T EP+G+ CG++ P P +K L N ++ P ++ S A KL +
Sbjct: 97 TXTIAEPVGIICGIV-PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155
Query: 440 LSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVS 499
+V AG PK +I + A+ +H I + TG G +K+A S K +
Sbjct: 156 AAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATG----GPGXVKAAYSSG--KPA 209
Query: 500 LELG-GKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTE 558
+ +G G P+VI + ++ +AV + F+ G C S + V +YD E+ +
Sbjct: 210 IGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS- 268
Query: 559 VKKMNHKAHL 568
HKAH+
Sbjct: 269 -----HKAHV 273
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVI 451
GV I +N+P L K AP L +G V++KP+ + ++ V AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI------MKSAAESNLKKVSLELGGK 505
+I+ G+ A + Q V FTGS T + ++ A N++ SL
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAIL 269
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN 563
D D ++ + + G+ C + R FV + LE + ++ K+
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKIT 327
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVI 451
GV I +N+P L K AP L +G V++KP+ + ++ V AG P G +
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 210
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI------MKSAAESNLKKVSLELGGK 505
+I+ G+ A + Q V FTGS T + ++ A N++ SL
Sbjct: 211 SIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 267
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN 563
D D ++ + + G+ C + R FV + LE + ++ K+
Sbjct: 268 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKIT 325
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVI 451
GV I +N+P L K AP L +G V++KP+ + ++ V AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI------MKSAAESNLKKVSLELGGK 505
+I+ G+ A + Q V FTGS T + ++ A N++ SL
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN 563
D D ++ + + G+ C + R FV + LE + ++ K+
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKIT 327
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVI 451
GV I +N+P L K AP L +G V++KP+ + ++ V AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI------MKSAAESNLKKVSLELGGK 505
+I+ G+ A + Q V FTGS T + ++ A N++ SL
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN 563
D D ++ + + G+ C + R FV + LE + ++ K+
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKIT 327
>pdb|1S3I|A Chain A, Crystal Structure Of The N Terminal Hydrolase Domain Of
10- Formyltetrahydrofolate Dehydrogenase
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDA-NIEGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T G ++ F S++ + +G + + G+ P
Sbjct: 211 INWDQPAEAIHNWIRGNDKVPGAWTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPG 270
Query: 72 ILHPDGLLFTGSDGQKVRNNN-QNVDGQYL 100
++ GL+ G+D + + N Q DG+ +
Sbjct: 271 VVTKAGLILFGNDDRMLLVKNIQLEDGKMM 300
>pdb|2BW0|A Chain A, Crystal Structure Of The Hydrolase Domain Of Human 10-
Formyltetrahydrofolate 2 Dehydrogenase
pdb|2CFI|A Chain A, The Hydrolase Domain Of Human 10-Fthfd In Complex With 6-
Formyltetrahydropterin
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANI-EGTPVTVEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + EG + + G+ P
Sbjct: 233 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 292
Query: 72 ILHPDGLLFTGSDGQKVRNNNQNVDGQYLILRS 104
++ GL+ G+D + + N ++ +IL S
Sbjct: 293 VVTKAGLILFGNDDKMLLVKNIQLEDGKMILAS 325
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 391 PIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALK----LAELSVRAGF 446
P+GV + P P + +K + AGN++V P + L+ ++E + +AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 447 PKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKS 506
PKG I+ + + + +H + TG G ++K+A S + + G
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATG----GSAMVKAAYSSGTPAIGVG-PGNG 222
Query: 507 PLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVD 544
P I N+ +AV+ + F+ G C S + V+
Sbjct: 223 PAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVE 260
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 500 LELG-GKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTE 558
LE G G + + + +L KAV + + G C +A ++ V I FL +V E
Sbjct: 232 LETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEE 290
Query: 559 VKKMNHKAHLDKLIDYCEKAK---------------SEGARLLIGGKRLDRPGDVDAVIK 603
++K + + CEK + +E L+I K + +VD I+
Sbjct: 291 LRKHGVE------VRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVVK---NVDEAIE 341
Query: 604 RANSTEYGLASGIFTSDINKAMYFVDKIDSGTVFINTYNK-TDVAAPFGGFKQSGFGKDL 662
G + I T + + A FV +ID+ V++N + TD GG Q GFG ++
Sbjct: 342 HIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTD-----GG--QFGFGAEI 394
Query: 663 DINKAMY 669
I+ +
Sbjct: 395 GISTQRF 401
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 10/178 (5%)
Query: 393 GVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVI 451
GV I +N+P L K AP L +G V++KP+ + ++ V AG P G +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 452 NILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI------MKSAAESNLKKVSLELGGK 505
+I+ G+ A + Q V FTGS T + ++ A N++ SL
Sbjct: 213 SIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 506 SPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMN 563
D D ++ + + G+ + R FV + LE + ++ K+
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKIT 327
>pdb|1HN0|A Chain A, Crystal Structure Of Chondroitin Abc Lyase I From Proteus
Vulgaris At 1.9 Angstroms Resolution
Length = 1021
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 42/238 (17%)
Query: 5 DDAISITVIKFNLKGEEIHNF--IRGLDSSPG-ASTVLNGIEV-KVFASSMWEDANIEGT 60
D +++ N+ EI+N G S G A V NG ++ + + W+ +EG
Sbjct: 637 DKMVTLKAYNTNVWSSEIYNKDNRYGRYQSHGVAQIVSNGSQLSQGYQQEGWDWNRMEGA 696
Query: 61 P---VTVEGSDTPAILHPDGLLFTGSDGQKVRNNNQNVDGQY--LILRSLVLMNVTRFLF 115
+ ++ D+P P L+ G G + +++GQY + + N+ RF
Sbjct: 697 TTIHLPLKDLDSPK---PHTLMQRGERG---FSGTSSLEGQYGMMAFNLIYPANLERFDP 750
Query: 116 DMKVNVKRLLVDNKMIHACNFGKEKDSAKDLVLTESEEAIIPVLKTIWAGILNSEVSEDT 175
+ L DN +I + D K++ T + AI P L T+W +N + E+
Sbjct: 751 NFTAKKSVLAADNHLIFIGSNINSSDKNKNVETTLFQHAITPTLNTLW---INGQKIENM 807
Query: 176 DFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVFRDFYIKVIE---VSRQGDVS 230
+ Q TLQ D L+ S + I E VSRQ VS
Sbjct: 808 PY---------------------QTTLQQGDWLIDSNGNGYLITQAEKVNVSRQHQVS 844
>pdb|4IQF|A Chain A, Crystal Structure Of Methyionyl-trna Formyltransferase
From Bacillus Anthracis
pdb|4IQF|B Chain B, Crystal Structure Of Methyionyl-trna Formyltransferase
From Bacillus Anthracis
pdb|4IQF|C Chain C, Crystal Structure Of Methyionyl-trna Formyltransferase
From Bacillus Anthracis
pdb|4IQF|D Chain D, Crystal Structure Of Methyionyl-trna Formyltransferase
From Bacillus Anthracis
Length = 317
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVF 47
I + GEE++N IRGL+ P A T L G VKV+
Sbjct: 215 IDWTKTGEEVYNHIRGLNPWPVAYTTLAGQVVKVW 249
>pdb|2DFJ|A Chain A, Crystal Structure Of The Diadenosine Tetraphosphate
Hydrolase From Shigella Flexneri 2a
pdb|2DFJ|B Chain B, Crystal Structure Of The Diadenosine Tetraphosphate
Hydrolase From Shigella Flexneri 2a
Length = 280
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 176 DFFQSGAGSMDVVRLIEEIKENLQITLQNEDVLMSSVF--------RDFYIKVIEVSRQG 227
D G GS+DV+R ++ + +++++ L N D+ + +VF +D ++E
Sbjct: 37 DLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDAD 96
Query: 228 DVSNQLNHESI 238
++ N L + +
Sbjct: 97 ELLNWLRRQPL 107
>pdb|3R20|A Chain A, Crystal Structure Of Cytidylate Kinase From Mycobacterium
Smegmatis
Length = 233
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 17 LKGEEIHNFIRGLDSSPGASTVLNGI-EVKVFASSMWEDANIEGTPVTVEGSDTPAILHP 75
L GE++ + IRG D+ GA + ++ + V+ + EG V VEG D ++ P
Sbjct: 86 LAGEDVSSEIRG-DAVTGAVSAVSAVPAVRTRLVDIQRKLATEGGRVVVEGRDIGTVVLP 144
Query: 76 DG---LLFTGSDGQKVRNNN-QNVDGQYLILRSLVLMNVTR 112
D + T S ++ R N QNV + VL +V R
Sbjct: 145 DADVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQR 185
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 120/304 (39%), Gaps = 33/304 (10%)
Query: 379 RPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLA 438
RP+ R P+GV G+I + P + + A CL +GN +++ + + LA
Sbjct: 125 RPSGIQVGQMRVPLGVIGIIY-ESRPNVTIDAA-ALCLKSGNATILRGGSEALESNTALA 182
Query: 439 ELS----VRAGFPKGVINIL-PGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAES 493
+L AG P+ + ++ A G I+ + + G +++ A
Sbjct: 183 KLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVP 242
Query: 494 NLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLE 553
+K L G + + D ++ KA+ + G C + + V I A L
Sbjct: 243 MIK----HLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLS 297
Query: 554 -------------KVVTEVKKMNHKAHLDKLIDYC-EKAKSEGARLLIGGKRLDRPGDVD 599
+V + + + A + L+D E ++E ++ K +D +D
Sbjct: 298 PLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEYLAPVLAIKIVD---GID 354
Query: 600 AVIKRANSTEYG--LASGIFTSDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSG 657
A I+ N EYG I T D ++AM F+ ++DS +V +N + FG + G
Sbjct: 355 AAIEHIN--EYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIG 412
Query: 658 FGKD 661
D
Sbjct: 413 ISND 416
>pdb|3RBH|A Chain A, Structure Of Alginate Export Protein Alge From Pseudomonas
Aeruginosa
pdb|3RBH|B Chain B, Structure Of Alginate Export Protein Alge From Pseudomonas
Aeruginosa
pdb|3RBH|C Chain C, Structure Of Alginate Export Protein Alge From Pseudomonas
Aeruginosa
pdb|3RBH|D Chain D, Structure Of Alginate Export Protein Alge From Pseudomonas
Aeruginosa
Length = 479
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 27 RGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAILHPDGLLFTGSDGQ 86
R L ++PG + GI+++ +A W D + V +DT + D L DG
Sbjct: 45 RDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFXGQAVAATDT---IETDTLQSDTDDGN 101
Query: 87 KVRNNNQNVDGQYLILRSLVL--MNVTRFLFD-MKVNVKRLLVDNKMIHACN 135
RN+ + D YL R + +T + + ++ +RL D+ N
Sbjct: 102 NSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLREDSGQWQDTN 153
>pdb|4AFK|A Chain A, In Meso Structure Of Alginate Transporter, Alge, From
Pseudomonas Aeruginosa, Pao1
Length = 458
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 27 RGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVTVEGSDTPAILHPDGLLFTGSDGQ 86
R L ++PG + GI+++ +A W D + V +DT + D L DG
Sbjct: 24 RDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDT---IETDTLQSDTDDGN 80
Query: 87 KVRNNNQNVDGQYLILRSLVL 107
RN+ + D YL R +
Sbjct: 81 NSRNDGREPDKSYLAAREFWV 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,870,985
Number of Sequences: 62578
Number of extensions: 891332
Number of successful extensions: 2621
Number of sequences better than 100.0: 108
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2120
Number of HSP's gapped (non-prelim): 181
length of query: 709
length of database: 14,973,337
effective HSP length: 106
effective length of query: 603
effective length of database: 8,340,069
effective search space: 5029061607
effective search space used: 5029061607
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)