RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15158
(709 letters)
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 413 bits (1063), Expect = e-138
Identities = 194/462 (41%), Positives = 272/462 (58%), Gaps = 54/462 (11%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWSRL 308
++FIN E+ +SV G NPA E +C V+ + +DVD A AA +AF+ W +
Sbjct: 14 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 73
Query: 309 SARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKI 368
A +RG L+ KLADL+E+++ LAT+E+++ G +++ A +G I T +Y AGW DKI
Sbjct: 74 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 133
Query: 369 LGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSE 428
G TIP+ + FT+T+ EP+GVCG I PWN+PL+M WK+ P L+ GNTVV+KP+E
Sbjct: 134 QGRTIPM----DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 189
Query: 429 VSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMK 488
+PLTAL + L AGFP GV+NI+PG G G AIS H+ + KV FTGST G I +
Sbjct: 190 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 249
Query: 489 SAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIY 548
+A +SNLK+VSLELGGKSP ++F D +LD AV + GVF+++G+ CI+A R+FV+ +IY
Sbjct: 250 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 309
Query: 549 DAFLEKVV---------------TEVKKMNHKAHLDKLIDYCEKAKSEGARLLIGGKRLD 593
D F+ + V K +K++D E K EGA+L GG
Sbjct: 310 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 369
Query: 594 RPG---------------------------------DVDAVIKRANSTEYGLASGIFTSD 620
G +D VIKRAN+T YGL++GIFT+D
Sbjct: 370 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 429
Query: 621 INKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
I+KA+ + SGTV++N Y+ PFGGFK SG G++L
Sbjct: 430 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 471
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 405 bits (1042), Expect = e-135
Identities = 181/464 (39%), Positives = 258/464 (55%), Gaps = 54/464 (11%)
Query: 249 FPNQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFE--GEWS 306
F NQ+FIN E+ ++V + +NP+ IC V + +DVD A AA AF+ W
Sbjct: 12 FCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWR 71
Query: 307 RLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCD 366
R+ A RG L+ +LADL+E+++ LA +E+LD+G Y ++ + M + +Y+AGW D
Sbjct: 72 RMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWAD 131
Query: 367 KILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKP 426
K G TIPI F++T+ EP+GVCG I PWN+PL+M +WK+ P LA GN VVMK
Sbjct: 132 KYHGKTIPI----DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKV 187
Query: 427 SEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKI 486
+E +PLTAL +A L AGFP GV+NI+PG G G AI+ H + KV FTGST G I
Sbjct: 188 AEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247
Query: 487 MKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSN 546
+A SNLK+V+LELGGKSP +I D ++D AV + +FFN+G+ + R FV +
Sbjct: 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307
Query: 547 IYDAFLEKVVTEVKK---------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR 591
IYD F+E+ V K + K++ Y K EGA+LL GG
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 592 LDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618
G ++ V+ RAN++ YGLA+ +FT
Sbjct: 368 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 427
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
D++KA Y + +GTV++N Y+ +PFGG+K SG G++L
Sbjct: 428 KDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGREL 471
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 358 bits (919), Expect = e-117
Identities = 154/463 (33%), Positives = 241/463 (52%), Gaps = 63/463 (13%)
Query: 254 FINGEFVNSVGGSSMEC-INPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSARD 312
+ G + S G++ E PA +C + +++VD A +A+ A+ +WS+++ +
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-KWSKMAGIE 81
Query: 313 RGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGST 372
R +M + A ++ + ++ +A +E +++G T ID + + +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTIT-----EAEYDIDAAWQCIEYYAGLAPTL 136
Query: 373 IPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPL 432
P F +T+REP+GVC I WNYP M+ +WK AP LA GN VV KPS ++P+
Sbjct: 137 SGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 433 TALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
T + LAE+ AG P G++N++ G GA TG + H + KV FTGS TG K+M+ +A+
Sbjct: 197 TGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAFL 552
+K V+LELGGKSPL+IF D L+ AVR ++ F +G+ C + R+FV I FL
Sbjct: 256 -TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 314
Query: 553 EKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLDRPG- 596
E+VV K + K LDK++ + +AK EGAR+L GG+ L
Sbjct: 315 EEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDP 374
Query: 597 --------------------------------------DVDAVIKRANSTEYGLASGIFT 618
+ V++RAN+T +GLASG+FT
Sbjct: 375 KLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFT 434
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKD 661
DI++A +++GT +INTY+ + V PFGG+K SGFG++
Sbjct: 435 RDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRE 477
>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW
{Escherichia coli [TaxId: 562]}
Length = 474
Score = 336 bits (862), Expect = e-109
Identities = 151/461 (32%), Positives = 233/461 (50%), Gaps = 56/461 (12%)
Query: 251 NQLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
++L INGE V+ G NPA + + A+++ VD A AA+ AF EW + +
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA-EWGQTTP 60
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
+ R + KLAD++E+N + A +ES + G A + +D +++FAG + G
Sbjct: 61 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 120
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
S +R+P+GV I PWNYPLMM +WK+AP LAAGN VV+KPSE++
Sbjct: 121 LAAGEYLEGHTS---MIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 177
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
PLTALKLAEL + FP GV+NIL G G G+ ++ H K+R V TGS TG I+
Sbjct: 178 PLTALKLAEL-AKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH- 235
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
S++K+ +ELGGK+P+++FDD +++ V ++N G++C +A RI+ IYD
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 551 FLEKVVTEVKKMNHKAHLDK---------------LIDYCEKAKSEGARLLIGGKRLDRP 595
+EK+ V + A D+ + E+AK+ G +I G +
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 596 G----------------------------------DVDAVIKRANSTEYGLASGIFTSDI 621
+ + V+ AN ++YGLAS ++T D+
Sbjct: 356 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 415
Query: 622 NKAMYFVDKIDSGTVFINTYNKTDVAAPFGGFKQSGFGKDL 662
+A ++ G ++NT+ P GG K SG+GKD+
Sbjct: 416 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 456
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 280 bits (717), Expect = 2e-87
Identities = 121/457 (26%), Positives = 204/457 (44%), Gaps = 52/457 (11%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
+ ++NGE+ S + ++ PA+ + + SV ++++VD +A+KA W LS
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP-AWRALSYI 61
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSID-TWKYFAGWCDKILG 370
+R + K+AD++ ++KE++ I S + Y A+ V + + G +
Sbjct: 62 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEV 121
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
A +REP+G+ I+P+NYP+ + K+AP L AGN + KP
Sbjct: 122 LEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 181
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
++ L LAE AG P GV N + G G+ G+ I +H + + FTGST G +I K A
Sbjct: 182 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 241
Query: 491 AESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDA 550
++ + LELGGK ++ +D +L+ + + G F G+ C + R+ V ++ D
Sbjct: 242 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 298
Query: 551 FLEKVVTEVKK--------------MNHKAHLDKLIDYCEKAKSEGARLLIGGKR----- 591
+EK+ +V + D + A +GA L KR
Sbjct: 299 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLI 358
Query: 592 -------------------------LDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMY 626
+ R V+ I+ +N +EYGL + IFT+D +A
Sbjct: 359 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418
Query: 627 FVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDL 662
++++ GTV IN + PF G K+SG G
Sbjct: 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG 455
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 251 bits (641), Expect = 8e-76
Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 62/463 (13%)
Query: 252 QLFINGEFVNSVGGSSMECINP-ANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSA 310
L+I GE+V++ M +NP A + + A + + A AA KAF+ W
Sbjct: 39 PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK-TWKDWPQ 95
Query: 311 RDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILG 370
DR L+ K A LM + K EL + G + A V +ID +Y+A +
Sbjct: 96 EDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRY 154
Query: 371 STIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVS 430
+ + N +F P+G +I PWN+P+ + + + +A GNTV+ KP+E +
Sbjct: 155 PAVEVVPYPGEDNESF--YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDA 212
Query: 431 PLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSA 490
+ K+ E+ AGFP GV+N LPG G G + +H +IR + FTGS G+KI ++A
Sbjct: 213 VVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272
Query: 491 A-----ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS 545
++ K+ +E GGK+ +++ + + D A + + +G+ C +A R+ +
Sbjct: 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ 332
Query: 546 NIYDAFLEKVVTEVKKMN--------------HKAHLDKLIDYCEKAKSEGARLLIGGKR 591
Y+ LE+V+ ++++ K++ Y E K+EG L++GGKR
Sbjct: 333 GAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKR 391
Query: 592 LDRPG---------------------------------DVDAVIKRANSTEYGLASGIFT 618
L+ G D ++ AN T YGL G+++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 619 SDINKAMYFVDKIDSGTVFINTYNKTDV--AAPFGGFKQSGFG 659
+ + G ++ N + PFGGFK SG
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTN 494
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 242 bits (619), Expect = 6e-73
Identities = 106/461 (22%), Positives = 187/461 (40%), Gaps = 56/461 (12%)
Query: 252 QLFINGEFVNSVGGSSMECINPANESTICSVQMANSDDVDIAALAAEKAFEGEWSRLSAR 311
++ GE+ S G +E +P + +TI V + ++V+ K +
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGT 75
Query: 312 DRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGS 371
+R ++ K AD++E+N + A + +++G + A+
Sbjct: 76 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDY 135
Query: 372 TIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSP 431
+REP+GV ITP+NYPL K+ GN VV+KPS P
Sbjct: 136 IPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDP 195
Query: 432 LTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAA 491
L A + + AGFP I +L G + ++ ++ V FTGST G +++K
Sbjct: 196 LPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKVGG 254
Query: 492 ESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDSNIYDAF 551
+K+ +ELGG P ++ +D +LD A G++ G+ C + + + +Y
Sbjct: 255 ---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 311
Query: 552 LEKVVTEVKKM---------------NHKAHLDKLIDYCEKAKSEGARLLIGGKRLD--- 593
+E+V + + + +D+++ E A +G R+L GG+RL
Sbjct: 312 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY 371
Query: 594 -------------------------------RPGDVDAVIKRANSTEYGLASGIFTSDIN 622
D+D I+ AN YGL + +F D+
Sbjct: 372 VQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 431
Query: 623 KAMYFVDKIDSGTVFINTYNKTDVA-APFGGFKQSGFGKDL 662
K V ++ G ++IN + + PFGG K+SG ++
Sbjct: 432 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 472
>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 446
Score = 211 bits (538), Expect = 7e-62
Identities = 92/416 (22%), Positives = 152/416 (36%), Gaps = 48/416 (11%)
Query: 290 VDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKT 349
+ A +AF S + R + L ++ +N + ++ + D G +
Sbjct: 2 ISDTVKRAREAFN-SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYE 60
Query: 350 HVGMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITPWNYPLMMLS 409
V ++ + + + EP+GV +I WNYP +
Sbjct: 61 EVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTI 120
Query: 410 WKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAGFPKGVINILPGTGAVTGEAISQHL 469
M +AAGN V++KPSEVS A LA L + + + G
Sbjct: 121 QPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPET---TELLKE 177
Query: 470 KIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMGGVFF 529
+ + +TGST G +M +AA+ +L V+LELGGKSP + D +LD A R G F
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236
Query: 530 NKGENCISAGRIFVDSNIYDAFLEKVVTEVK--------------KMNHKAHLDKLIDYC 575
N G+ C++ I D +I + +EK+ +K ++ + H ++
Sbjct: 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 576 EKAKSEGARLLIGGKRLDRP---------------------------GDVDAVIKRANST 608
+ K R P ++ I+ N
Sbjct: 297 DNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQR 356
Query: 609 EYGLASGIFTSDINKAMYFVDKIDSGTVFIN--TYNKTDVAAPFGGFKQSGFGKDL 662
E LA +F+++ + + SG V N + T PFGG SG G
Sbjct: 357 EKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYH 412
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 161 bits (407), Expect = 6e-44
Identities = 49/386 (12%), Positives = 125/386 (32%), Gaps = 16/386 (4%)
Query: 288 DDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLAL 347
D++ A +A++ + R++ + K+A+ +++ ++E+ +D +
Sbjct: 1 DELLEKAKKVREAWD-VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV 59
Query: 348 KTHV-------GMSIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLITP 400
K + ID + + + + R + + +
Sbjct: 60 KESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGII 119
Query: 401 WNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRAG-FPKGVINILPGTGA 459
+ + L +GNT++++ + + + A + + +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 460 VTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVIFDDYNLDKA 519
+ + +++R+ G ++ ++ V G + + + +L KA
Sbjct: 180 TDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKA 239
Query: 520 VRMSMGGVFFNKGENCISAGRIFVDSNIYDAFLEKVVTEVKKMNHKAHLDKLIDY----- 574
V + + G + + + I FL +V E++K + +
Sbjct: 240 VPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDV 298
Query: 575 -CEKAKSEGARLLIGGKRLDRPGDVDAVIKRANSTEYGLASGIFTSDINKAMYFVDKIDS 633
L + +VD I+ G + I T + + A FV +ID+
Sbjct: 299 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDA 358
Query: 634 GTVFINTYNKTDVAAPFGGFKQSGFG 659
V++N + FG + G
Sbjct: 359 AAVYVNASTRFTDGGQFGFGAEIGIS 384
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Vibrio harveyi [TaxId: 669]}
Length = 504
Score = 155 bits (391), Expect = 4e-41
Identities = 67/461 (14%), Positives = 135/461 (29%), Gaps = 69/461 (14%)
Query: 265 GSSMECINPANESTI-CSVQMANSDDVDIAALAAEKAFEGEWSRLSARDRGHLMFKLADL 323
+ N + + + +V+ AA AA K ++ RL+ R L+ +A
Sbjct: 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR-DFRRLNNSKRASLLRTIASE 60
Query: 324 MEQNKEELATIESLDSGAVYTLALKTHVGMSIDTWKYFAGWCDKILGSTIPIAHARPN-- 381
+E +++ L++ + + + + FA + + P
Sbjct: 61 LEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 119
Query: 382 ---SNFTFTKREPIGVCGLITPWNYPL--MMLSWKMAPCLAAGNTVVMKPSEVSPLTALK 436
++ +G + N+PL A LAAG V++K P T+
Sbjct: 120 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQI 179
Query: 437 LAELSVRA----GFPKGVINILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAE 492
+AE +A P+ + +L G G+A+ H +I+ VGFTGS G + A E
Sbjct: 180 VAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 239
Query: 493 SNLKKVSLELGGKSPLVIFDDYNLDKAVRMSMG---GVFFNKGENCISAGRIFVDSNIYD 549
G + ++ + G+ C G +F +
Sbjct: 240 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPET 299
Query: 550 AFLEKVVTEVKKMNH----------------------KAHLDKLIDYCEKAKSEGARLLI 587
+ + + +D E A +
Sbjct: 300 QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVT 359
Query: 588 GGKRLD-----------------RPGDVDAVIKRANSTEYGLASGIFTS--DINKAMYFV 628
+ +V ++ + L + I + D + +
Sbjct: 360 SSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLI 419
Query: 629 DKI--DSGTVFINTYNKTDVA--------APFGGFKQSGFG 659
++ +G + N + T V P+ S
Sbjct: 420 PRLEEIAGRLVFNGWP-TGVEVGYAMVHGGPYPASTHSAST 459
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 93.4 bits (231), Expect = 1e-20
Identities = 61/390 (15%), Positives = 118/390 (30%), Gaps = 56/390 (14%)
Query: 294 ALAAEKAFEGEWSRLSARDRGHLMFKLADLMEQNKEELATIESLDSGAVYTLALKTHV-- 351
A A KA +S R +++K+ D ++ N + +D L +
Sbjct: 9 AKNARKAGN-ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLK 67
Query: 352 -----------GM--SIDTWKYFAGWCDKILGSTIPIAHARPNSNFTFTKREPIGVCGLI 398
M I K+ + + + P+GV +I
Sbjct: 68 RLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMAREL-----DDGLTLYQVTAPVGVLLVI 122
Query: 399 TPWNYPLMMLSWKMAPCLAAGNTVVMKPSEVSPLTALKLAELSVRA--------GFPKGV 450
++ A + +GN ++K + S T ++A++ G P G
Sbjct: 123 FESRPEVIA--NITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGS 180
Query: 451 INILPGTGAVTGEAISQHLKIRKVGFTGSTVTGMKIMKSAAESNLKKVSLELGGKSPLVI 510
+ ++ V+ + + Q I V GS KI + V G + +
Sbjct: 181 VQLIETRQDVS-DLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYL 235
Query: 511 FDDYNLDKAVRMSMGGVFFNKGENCISAGRIFVDS-------NIYDAFLEKVVTEVKKMN 563
+D +L KA R+S+ + V K
Sbjct: 236 DEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL 295
Query: 564 HKAHLDKLIDYCEKAKSEGARLLIGGKRLD-------------RPGDVDAVIKRANSTEY 610
A+ DKL + + ++ + + + D ++ I+ N+
Sbjct: 296 KTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSS 355
Query: 611 GLASGIFTSDINKAMYFVDKIDSGTVFINT 640
I T + A F+ +DS V+ N
Sbjct: 356 RHTDAIVTENKANAEKFMKGVDSSGVYWNA 385
>d2bw0a1 b.46.1.1 (A:204-307) 10-formyltetrahydrofolate
dehydrogenase domain 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 104
Score = 41.7 bits (97), Expect = 3e-05
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWEDANIEGTPVT-VEGSDTPA 71
I ++ E IHN+IRG D PGA T ++ F S++ + + G+ P
Sbjct: 8 INWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPG 67
Query: 72 ILHPDGLLFTGSDGQKVR 89
++ GL+ G+D + +
Sbjct: 68 VVTKAGLILFGNDDKMLL 85
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus
casei [TaxId: 1582]}
Length = 80
Score = 39.8 bits (93), Expect = 5e-05
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 151 SEEAIIPVLKTIWAGILN---SEVSEDTDFFQS-GAGSMDVVRLIEEIKENLQITLQNED 206
++EAI + I A + + + D + F++ SM V+L+ E++ + +
Sbjct: 1 ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSE 60
Query: 207 V 207
Sbjct: 61 F 61
>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 76
Score = 38.3 bits (89), Expect = 2e-04
Identities = 8/64 (12%), Positives = 26/64 (40%)
Query: 149 TESEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDVL 208
E++ ++ + I + ++ D+ G S+ V + + ++ + L +V
Sbjct: 3 GEAQRDLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVR 62
Query: 209 MSSV 212
++
Sbjct: 63 QLTL 66
>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 83
Score = 37.3 bits (86), Expect = 5e-04
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 152 EEAIIPVLKTIWAGILN-SEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDV 207
I +L ++++ D + +G S V+L+ I+E I + +
Sbjct: 2 NATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLL 58
>d2blna1 b.46.1.1 (A:204-304) Polymyxin resistance protein ArnA,
domain 2 {Escherichia coli [TaxId: 562]}
Length = 101
Score = 31.7 bits (71), Expect = 0.075
Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 IKFNLKGEEIHNFIRGL-DSSPGASTVLNGIEVKVFASSMWE 53
++++ +HN +R + D PGA + + + V++S +
Sbjct: 5 LEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHP 46
>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl
carrier {Streptomyces rimosus [TaxId: 1927]}
Length = 95
Score = 31.1 bits (70), Expect = 0.099
Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 151 SEEAIIPVLKTIWA---GILNSEVSEDTDFFQSGAGSMDVVRLIEEIKENLQITLQNEDV 207
+ ++ +L+ I ED F G S+ ++ + I+ + + L ++ V
Sbjct: 5 TLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAV 64
Query: 208 LMSSVFRDF 216
++ R
Sbjct: 65 EKATTPRAL 73
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 115
Score = 30.9 bits (69), Expect = 0.15
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 151 SEEAIIPVLKTIWAGILNSEVSEDTD----FFQSGAGSMDVVRLIEEIKENLQITLQNED 206
++E II + I + E SE T S+ +V + + ++ + + +ED
Sbjct: 4 TQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDED 63
Query: 207 V 207
+
Sbjct: 64 L 64
>d1fmta1 b.46.1.1 (A:207-314) Methionyl-tRNAfmet
formyltransferase, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 108
Score = 30.1 bits (67), Expect = 0.29
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 13 IKFNLKGEEIHNFIRGLDSSPGASTVLNGIEVKVFASSMWED 54
I ++L ++ IR + P + + G VKV+ +S+ +
Sbjct: 8 IDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDT 49
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase
{Agrobacterium sp. [TaxId: 361]}
Length = 303
Score = 30.0 bits (66), Expect = 0.96
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 563 NHKAHLDKLIDYCEKAKSEGARLLI 587
+ + +L+D KA S GA ++
Sbjct: 19 TREQVVVRLLDMLTKAASRGANFIV 43
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos
taurus), brain [TaxId: 9913]}
Length = 400
Score = 28.0 bits (61), Expect = 4.5
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 138 KEKDSAKDLVLTE----SEEAIIPVLKTIWAGILNSEVSEDTDFFQSGAGSMDVVRLIEE 193
K K A D T +E I ++ + G+ E+++ + G ++RL
Sbjct: 41 KNKKFAVDFK-TLADVLVQEVIKENMENKFPGLGKKIFGEESNELTNDLGEKIIMRLGPT 99
Query: 194 IKENLQI 200
+E + +
Sbjct: 100 EEETVAL 106
>d1jiwi_ b.61.2.1 (I:) Metalloprotease inhibitor {Pseudomonas
aeruginosa, aprin [TaxId: 287]}
Length = 105
Score = 26.3 bits (58), Expect = 4.6
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 75 PDGLLFTGSDGQKVRNNNQNVDGQY 99
P G+ G + + +G Y
Sbjct: 65 PAGIALLERGGLTLMLLGRQGEGDY 89
>d1zgha1 b.46.1.1 (A:165-226) Methionyl-tRNAfmet
formyltransferase, C-terminal domain {Clostridium
thermocellum [TaxId: 1515]}
Length = 62
Score = 25.4 bits (56), Expect = 5.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 13 IKFNLKGEEIHNFIRGLDSS 32
I + E+I+++IR LD
Sbjct: 8 ISPDFDLEKIYDYIRMLDGE 27
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.388
Gapped
Lambda K H
0.267 0.0620 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,576,528
Number of extensions: 121628
Number of successful extensions: 301
Number of sequences better than 10.0: 1
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 34
Length of query: 709
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 617
Effective length of database: 1,144,436
Effective search space: 706117012
Effective search space used: 706117012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (25.6 bits)