Query psy15159
Match_columns 238
No_of_seqs 208 out of 1266
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 22:06:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxe_A Na, K-ATPase alpha subu 100.0 2.6E-34 8.9E-39 288.9 21.5 191 23-238 153-358 (1028)
2 3ixz_A Potassium-transporting 100.0 2.5E-34 8.6E-39 289.2 16.0 191 23-238 158-363 (1034)
3 3rfu_A Copper efflux ATPase; a 100.0 4.1E-34 1.4E-38 278.3 12.9 195 3-238 192-403 (736)
4 1mhs_A Proton pump, plasma mem 100.0 1.6E-33 5.6E-38 279.2 15.3 181 23-238 159-355 (920)
5 3ar4_A Sarcoplasmic/endoplasmi 100.0 1.2E-32 4E-37 276.2 18.5 193 23-238 107-329 (995)
6 3j08_A COPA, copper-exporting 100.0 3.3E-33 1.1E-37 269.0 11.9 195 3-238 100-309 (645)
7 3j09_A COPA, copper-exporting 100.0 8.2E-33 2.8E-37 269.3 14.0 194 4-238 179-387 (723)
8 3b8c_A ATPase 2, plasma membra 100.0 6.2E-33 2.1E-37 274.6 0.3 180 23-238 111-306 (885)
9 2hc8_A PACS, cation-transporti 99.9 1.9E-23 6.4E-28 158.9 4.4 97 32-163 2-112 (113)
10 2kij_A Copper-transporting ATP 99.9 4.7E-23 1.6E-27 159.1 5.0 102 26-162 2-123 (124)
11 2k1g_A Lipoprotein SPR; soluti 27.0 16 0.00055 27.4 0.5 19 48-67 61-79 (135)
12 2hba_A BL17, 50S ribosomal pro 24.3 20 0.00067 22.5 0.4 16 52-67 9-24 (52)
13 2jyx_A Lipoprotein SPR; soluti 22.5 30 0.001 25.7 1.2 19 48-67 61-79 (136)
No 1
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=2.6e-34 Score=288.87 Aligned_cols=191 Identities=24% Similarity=0.331 Sum_probs=176.0
Q ss_pred eeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc----------eeeeeeccccccCCcceee
Q psy15159 23 AIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK----------GIDLAIDESSFTGETEPAT 87 (238)
Q Consensus 23 ~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~----------~~~~~vdES~LTGEs~Pv~ 87 (238)
++||+++++++++|+++.++.++| | ++|+++|| +|||+|.+++|+ +.++.||||+|||||.|+.
T Consensus 153 ~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~L-v~GDiV~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~ 231 (1028)
T 2zxe_A 153 YYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFV-VAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQT 231 (1028)
T ss_dssp HHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGC-CTTCEEEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHC-CcCCEEEECCCCEeeceEEEEeeCcEEEEcCccCCCCccee
Confidence 457788999999999999999988 5 78999999 999999999993 3368999999999999999
Q ss_pred ccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhccCCCCC
Q psy15159 88 KVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAEEAPKT 167 (238)
Q Consensus 88 K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 167 (238)
|.+++..++ +.+++|++|+||.|.+|.+ +++|++||.+|.+|+|.+++..++..++
T Consensus 232 K~~~~~~~~--~~~~~n~v~~GT~v~~G~~----------------------~~~V~~tG~~T~~g~i~~~~~~~~~~~t 287 (1028)
T 2zxe_A 232 RSPEFSSEN--PLETRNIAFFSTNCVEGTA----------------------RGVVVYTGDRTVMGRIATLASGLEVGRT 287 (1028)
T ss_dssp CCSSCCCSS--TTTCSSEECTTCEEEEEEE----------------------EEEEEECGGGSHHHHHHHHHHHSCCCCC
T ss_pred cccCCCCCC--cccccceEEeCceEEcceE----------------------EEEEEEeccccHHHHHHHhccCCCCCCC
Confidence 998876433 5689999999999999999 9999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhC
Q psy15159 168 PLQKSMDILGTQLSLYSFCIIGLIMLLGWFQGRPVLDMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRIYI 238 (238)
Q Consensus 168 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~~l~~~~~rl~k 238 (238)
|+|+.+++++.++.++++++++++++++++.+.+|...+.+++++++++|||+||++++++++.+++||+|
T Consensus 288 ~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak 358 (1028)
T 2zxe_A 288 PIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMAR 358 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999888888877778889999999999999999999999999999999999986
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=2.5e-34 Score=289.18 Aligned_cols=191 Identities=25% Similarity=0.347 Sum_probs=176.6
Q ss_pred eeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc----------eeeeeeccccccCCcceee
Q psy15159 23 AIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK----------GIDLAIDESSFTGETEPAT 87 (238)
Q Consensus 23 ~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~----------~~~~~vdES~LTGEs~Pv~ 87 (238)
++||+++++++++|+++.++.++| | ++|+++|| ||||+|.+++|+ +.++.||||+|||||.|+.
T Consensus 158 ~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eL-v~GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~ 236 (1034)
T 3ixz_A 158 YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQL-VVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQT 236 (1034)
T ss_pred HHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHC-CCCcEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCee
Confidence 568999999999999999999998 5 88999999 999999999993 3467899999999999999
Q ss_pred ccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhccCCCCC
Q psy15159 88 KVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAEEAPKT 167 (238)
Q Consensus 88 K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 167 (238)
|.+++..+ .+.+++|++|+||.|.+|.+ +++|++||.+|.+|+|.+++...+..++
T Consensus 237 K~~~~~~~--~~~~~~n~~f~GT~v~~G~~----------------------~~vVv~tG~~T~~GkI~~~~~~~~~~~t 292 (1034)
T 3ixz_A 237 RSPECTHE--SPLETRNIAFFSTMCLEGTA----------------------QGLVVNTGDRTIIGRIASLASGVENEKT 292 (1034)
T ss_pred ccCCCccc--cccccccceecceeEEeecc----------------------eEEEEeehhhhHhhHHHHhhcccccCCC
Confidence 99876532 34578999999999999999 9999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhC
Q psy15159 168 PLQKSMDILGTQLSLYSFCIIGLIMLLGWFQGRPVLDMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRIYI 238 (238)
Q Consensus 168 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~~l~~~~~rl~k 238 (238)
|+|+.++++..++..++++++++++++++..+.+|.+.+.+++++++++|||+||++++++++++++||+|
T Consensus 293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak 363 (1034)
T 3ixz_A 293 PIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLAS 363 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhh
Confidence 99999999999999999988888888888888999999999999999999999999999999999999986
No 3
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=4.1e-34 Score=278.33 Aligned_cols=195 Identities=18% Similarity=0.220 Sum_probs=176.7
Q ss_pred hhhHHHHHhhhhhhhccceeeeehhhhcccchhhhhccCCCccc---c---cccccCCceeeccEEEecCcc--------
Q psy15159 3 SVFLTLFFTKIFRPSQGIDLAIDESSFTGETEPATKVTSPMLKT---N---GHTSMRNIAFMGTLVRCGNGK-------- 68 (238)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~l~~~~~~~~~v---d---~~i~~~~L~v~GDiv~l~~G~-------- 68 (238)
++++++++.+.+.+.+.+. ++.+++++|.++.|..+++ | ++|+.++| +|||+|.+++|+
T Consensus 192 ~~ii~~~llg~~le~~a~~------~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l-~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 192 AVITTLVLLGQVLELKARE------QTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNV-AVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHC------CCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTC-CTTCEECCCSSEECCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhC-CCCCEEEECCCCcccccEEE
Confidence 3566777777777777555 6888899999999998875 4 78999999 999999999993
Q ss_pred -eeeeeeccccccCCcceeeccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeC
Q psy15159 69 -GIDLAIDESSFTGETEPATKVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTG 147 (238)
Q Consensus 69 -~~~~~vdES~LTGEs~Pv~K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG 147 (238)
.+...||||+|||||.|+.|.+++. +|+||.+.+|.+ +++|++||
T Consensus 265 l~G~~~VDES~LTGES~Pv~K~~gd~------------v~~Gt~~~~G~~----------------------~~~v~~~G 310 (736)
T 3rfu_A 265 QEGRSFVDESMVTGEPIPVAKEASAK------------VIGATINQTGSF----------------------VMKALHVG 310 (736)
T ss_dssp CSSCEEEECSSSTTCSSCEEECTTCE------------ECTTCEEESCCC----------------------CEEECCCS
T ss_pred EECceEeeecccCCccccEEeccCCc------------CCCceEeccceE----------------------EEEEEEec
Confidence 3467799999999999999999988 999999999999 99999999
Q ss_pred cchhhHhHHHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHcCCchHHHH
Q psy15159 148 EKSEFGEVFKMMQAEEAPKTPLQKSMDILGTQLSLYSFCIIGLIMLLGWFQGR--PVLDMFTIGVSLAVAAIPEGLPIVV 225 (238)
Q Consensus 148 ~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~lv~~~P~~Lp~~~ 225 (238)
.+|.+|||.+++++++..++|+|+.+|+++.++++++++++++++++|++.+. .|...+.+++++++++|||+||+++
T Consensus 311 ~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~ 390 (736)
T 3rfu_A 311 SDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLAT 390 (736)
T ss_dssp TTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHH
T ss_pred hhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999998887664 3788999999999999999999999
Q ss_pred HHHHHHHHHHhhC
Q psy15159 226 TVTLALGVMRIYI 238 (238)
Q Consensus 226 ~~~l~~~~~rl~k 238 (238)
|+++..+.+|++|
T Consensus 391 p~a~~~~~~~~a~ 403 (736)
T 3rfu_A 391 PMSIMVGVGKGAQ 403 (736)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999874
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=1.6e-33 Score=279.23 Aligned_cols=181 Identities=18% Similarity=0.333 Sum_probs=166.0
Q ss_pred eeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc----------ee-eeeeccccccCCccee
Q psy15159 23 AIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK----------GI-DLAIDESSFTGETEPA 86 (238)
Q Consensus 23 ~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~----------~~-~~~vdES~LTGEs~Pv 86 (238)
++||+++++++++|+++.++.++| | ++|+++|| +|||+|.+++|+ +. .+.||||+|||||.||
T Consensus 159 ~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eL-v~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV 237 (920)
T 1mhs_A 159 FVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEV-VPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAV 237 (920)
T ss_dssp HHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTS-CTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCE
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHc-CCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcce
Confidence 347888999999999999999988 5 78999999 999999999993 33 2799999999999999
Q ss_pred eccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhccCCCC
Q psy15159 87 TKVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAEEAPK 166 (238)
Q Consensus 87 ~K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 166 (238)
.|.+++. +|+||.|.+|.+ +++|++||.+|.+|+|.+++++++..+
T Consensus 238 ~K~~gd~------------v~sGT~v~~G~~----------------------~~~V~~tG~~T~~g~I~~lv~~a~~~~ 283 (920)
T 1mhs_A 238 DKHKGDQ------------VFASSAVKRGEA----------------------FVVITATGDNTFVGRAAALVNAASGGS 283 (920)
T ss_dssp ECCSSCE------------ECSCBCCSCCCE----------------------EEEEEECSTTCSTTTTTSSCCCCCCCC
T ss_pred EecCCCe------------eecCceEecceE----------------------EEEEEEeCCcCHHHHHHHHHhhcccCC
Confidence 9998876 999999999999 999999999999999999999888899
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhC
Q psy15159 167 TPLQKSMDILGTQLSLYSFCIIGLIMLLGWFQGRPVLDMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRIYI 238 (238)
Q Consensus 167 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~~l~~~~~rl~k 238 (238)
+|+|+.++++..++.++++++++++++.+++.+.++.+++.+++++++++|||+||++++++++.|++||+|
T Consensus 284 ~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak 355 (920)
T 1mhs_A 284 GHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAK 355 (920)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888888777777766777889999999999999999999999999999999999975
No 5
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1.2e-32 Score=276.24 Aligned_cols=193 Identities=35% Similarity=0.486 Sum_probs=167.4
Q ss_pred eeehhhhcccchhhhhccCCCccc--c-----cccccCCceeeccEEEecCcc------------eeeeeeccccccCCc
Q psy15159 23 AIDESSFTGETEPATKVTSPMLKT--N-----GHTSMRNIAFMGTLVRCGNGK------------GIDLAIDESSFTGET 83 (238)
Q Consensus 23 ~~~e~~~~~~~~~l~~~~~~~~~v--d-----~~i~~~~L~v~GDiv~l~~G~------------~~~~~vdES~LTGEs 83 (238)
++||+++++++++|+++.++.++| | ++|+++|| +|||+|.+++|+ ++++.||||+|||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~l-v~GDiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES 185 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDI-VPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 185 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGC-CTTCEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHC-CCCCEEEECCCCcccccEEEEEEeeceEEEEcccccCCC
Confidence 457888999999999999998887 4 35999999 999999999992 235689999999999
Q ss_pred ceeeccCCCCCC-CCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhcc
Q psy15159 84 EPATKVTSPMLK-TNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAE 162 (238)
Q Consensus 84 ~Pv~K~~~~~~~-~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~ 162 (238)
.|+.|.+++..+ +.+..+++|++|+||.|.+|.+ +++|++||.+|.+|||.+++.++
T Consensus 186 ~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~----------------------~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 186 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKA----------------------LGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp SCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEE----------------------EEEEEECGGGSHHHHHHHHHHTC
T ss_pred cceeccccccCCcccCcccccceEecCCEEEcceE----------------------EEEEEEcCcchHHHHHHHHhhcC
Confidence 999999886533 2457788999999999999999 99999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h----cCCCHH----HHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q psy15159 163 EAPKTPLQKSMDILGTQLSLYSFCIIGLIMLLGW--F----QGRPVL----DMFTIGVSLAVAAIPEGLPIVVTVTLALG 232 (238)
Q Consensus 163 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~--~----~~~~~~----~~~~~~l~~lv~~~P~~Lp~~~~~~l~~~ 232 (238)
+..++|+|+.+++++.++.+++++++++++++++ + .+.+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 9999999999999999999998888877776554 2 222343 35668899999999999999999999999
Q ss_pred HHHhhC
Q psy15159 233 VMRIYI 238 (238)
Q Consensus 233 ~~rl~k 238 (238)
.+||+|
T Consensus 324 ~~~ma~ 329 (995)
T 3ar4_A 324 TRRMAK 329 (995)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 999975
No 6
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.3e-33 Score=268.95 Aligned_cols=195 Identities=16% Similarity=0.197 Sum_probs=173.9
Q ss_pred hhhHHHHHhhhhhhhccceeeeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc---------
Q psy15159 3 SVFLTLFFTKIFRPSQGIDLAIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK--------- 68 (238)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~--------- 68 (238)
++++++++.+.+.+.+.+. ++.+++++|.++.|..++| | ++|+++|| +|||+|.+++|+
T Consensus 100 ~~i~~~~~ig~~le~~~~~------~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l-~~GDiv~v~~Ge~IPaDg~vl 172 (645)
T 3j08_A 100 VLLLAFLLLGRTLEARAKS------RTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEV-AVGDIVIVRPGEKIPVDGVVV 172 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHC------CCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGC-CTTCEEEECTTCBCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHC-CCCCEEEECCCCEEeeEEEEE
Confidence 3455555666666665444 6788999999999999888 4 78999999 999999999993
Q ss_pred eeeeeeccccccCCcceeeccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCc
Q psy15159 69 GIDLAIDESSFTGETEPATKVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGE 148 (238)
Q Consensus 69 ~~~~~vdES~LTGEs~Pv~K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~ 148 (238)
++++.||||+|||||.|+.|.+++. +|+||.+.+|.+ +++|+++|.
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~------------v~~Gt~~~~g~~----------------------~~~v~~~G~ 218 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDE------------VFGATINNTGVL----------------------KIRATRVGG 218 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCE------------ECTTCEECSSCE----------------------EEEEEECGG
T ss_pred ECcEEEEcccccCCCCceecCCCCE------------eeccEEEecCcE----------------------EEEEEEcCC
Confidence 3467899999999999999999988 999999999999 999999999
Q ss_pred chhhHhHHHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCchHHHHHH
Q psy15159 149 KSEFGEVFKMMQAEEAPKTPLQKSMDILGTQLSLYSFCIIGLIMLLGWFQ-GRPVLDMFTIGVSLAVAAIPEGLPIVVTV 227 (238)
Q Consensus 149 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~ 227 (238)
+|.+|+|.+++++++..++|+|+.+++++.++.++.++++++.++.|++. +.++...+.+++++++++|||+||+++|+
T Consensus 219 ~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~ 298 (645)
T 3j08_A 219 ETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPT 298 (645)
T ss_dssp GSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999998888887765 45777888999999999999999999999
Q ss_pred HHHHHHHHhhC
Q psy15159 228 TLALGVMRIYI 238 (238)
Q Consensus 228 ~l~~~~~rl~k 238 (238)
++..+..+++|
T Consensus 299 a~~~~~~~~a~ 309 (645)
T 3j08_A 299 ALTVGMGKGAE 309 (645)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=8.2e-33 Score=269.26 Aligned_cols=194 Identities=16% Similarity=0.200 Sum_probs=173.3
Q ss_pred hhHHHHHhhhhhhhccceeeeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc---------e
Q psy15159 4 VFLTLFFTKIFRPSQGIDLAIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK---------G 69 (238)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~---------~ 69 (238)
+++++++.+.+.+.+.+. ++.+++++|.++.|..++| | ++|+++|| +|||+|.+++|+ .
T Consensus 179 ~i~~~~~ig~~le~~~~~------~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l-~~GDiv~v~~Ge~IPaDg~vl~ 251 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKS------RTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEV-AVGDIVIVRPGEKIPVDGVVVE 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHT------TCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGC-CTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHC-CCCCEEEECCCCEEeeEEEEEE
Confidence 445555566666555433 6788999999999999888 4 78999999 999999999993 3
Q ss_pred eeeeeccccccCCcceeeccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcc
Q psy15159 70 IDLAIDESSFTGETEPATKVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEK 149 (238)
Q Consensus 70 ~~~~vdES~LTGEs~Pv~K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~ 149 (238)
+++.||||+|||||.|+.|.+++. +|+||.+.+|.+ +++|+++|.+
T Consensus 252 G~~~VdeS~LTGES~pv~K~~g~~------------v~~Gt~~~~g~~----------------------~~~v~~~g~~ 297 (723)
T 3j09_A 252 GESYVDESMISGEPVPVLKSKGDE------------VFGATINNTGVL----------------------KIRATRVGGE 297 (723)
T ss_dssp CCEEEECHHHHCCSSCEEECTTCE------------ECTTCEECSSCE----------------------EEEEEECGGG
T ss_pred CCeEEecccccCCCcceeecCCCe------------eccceEEecCcE----------------------EEEEEEecCc
Confidence 467899999999999999999988 999999999999 9999999999
Q ss_pred hhhHhHHHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCchHHHHHHH
Q psy15159 150 SEFGEVFKMMQAEEAPKTPLQKSMDILGTQLSLYSFCIIGLIMLLGWFQ-GRPVLDMFTIGVSLAVAAIPEGLPIVVTVT 228 (238)
Q Consensus 150 T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~~ 228 (238)
|.+|+|.+++++++..++|+|+.+++++.+++++.++++++.++.|++. +.++...+.+++++++++|||+||+++|++
T Consensus 298 T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a 377 (723)
T 3j09_A 298 TLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTA 377 (723)
T ss_dssp SHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888887665 567788899999999999999999999999
Q ss_pred HHHHHHHhhC
Q psy15159 229 LALGVMRIYI 238 (238)
Q Consensus 229 l~~~~~rl~k 238 (238)
+..+..+++|
T Consensus 378 ~~~~~~~~a~ 387 (723)
T 3j09_A 378 LTVGMGKGAE 387 (723)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 8
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=99.97 E-value=6.2e-33 Score=274.62 Aligned_cols=180 Identities=24% Similarity=0.332 Sum_probs=158.1
Q ss_pred eeehhhhcccchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc----------eeeeeeccccccCCcceee
Q psy15159 23 AIDESSFTGETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK----------GIDLAIDESSFTGETEPAT 87 (238)
Q Consensus 23 ~~~e~~~~~~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~----------~~~~~vdES~LTGEs~Pv~ 87 (238)
++||+++++++++|.++.++.++| | ++|+++|| +|||+|.+++|+ +..+.||||+|||||.||.
T Consensus 111 ~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~L-v~GDiV~l~~Gd~IPaDg~ll~g~~l~VdES~LTGES~Pv~ 189 (885)
T 3b8c_A 111 FIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAIL-VPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189 (885)
T ss_dssp TTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTT-CTTSBCCCCSSCCCSSCCCCCCSSCBCCCCCSTTCCSSCCC
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHC-CCCCEEEECCCCEEeeceEEEEcCcccccccccCCCCcceE
Confidence 457889999999999999999988 5 78999999 999999999993 3357899999999999999
Q ss_pred ccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhccCCCCC
Q psy15159 88 KVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAEEAPKT 167 (238)
Q Consensus 88 K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 167 (238)
|.+++. +|+||.|.+|.+ +++|++||.+|.+|||.++++. +..++
T Consensus 190 K~~g~~------------v~~GT~v~~G~~----------------------~~~V~~tG~~T~~g~i~~lv~~-~~~~~ 234 (885)
T 3b8c_A 190 KHPGQE------------VFSGSTCKQGEI----------------------EAVVIATGVHTFFGKAAHLVDS-TNQVG 234 (885)
T ss_dssp BSSCCC------------CCSCCCCCSCCC----------------------CCBCCSCTTTTTSTTCCCSCCS-CSCCS
T ss_pred ecCCCc------------cccCeEEeeeEE----------------------EEEEEEcCcccHHHHHHHHHhc-ccccC
Confidence 999877 999999999999 9999999999999999998876 67899
Q ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhC
Q psy15159 168 PLQKSMDILGTQLSL-YSFCIIGLIMLLGWFQGRPVLDMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRIYI 238 (238)
Q Consensus 168 ~l~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~P~~Lp~~~~~~l~~~~~rl~k 238 (238)
|+|+.++++++++.. +++.+++++++.+++.+.+|.+.+.+++++++++|||+||++++++++.|++||+|
T Consensus 235 ~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak 306 (885)
T 3b8c_A 235 HFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 306 (885)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999988544 33334444455555566788889999999999999999999999999999999986
No 9
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.88 E-value=1.9e-23 Score=158.88 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=88.3
Q ss_pred cchhhhhccCCCccc--c---cccccCCceeeccEEEecCcc---------eeeeeeccccccCCcceeeccCCCCCCCC
Q psy15159 32 ETEPATKVTSPMLKT--N---GHTSMRNIAFMGTLVRCGNGK---------GIDLAIDESSFTGETEPATKVTSPMLKTN 97 (238)
Q Consensus 32 ~~~~l~~~~~~~~~v--d---~~i~~~~L~v~GDiv~l~~G~---------~~~~~vdES~LTGEs~Pv~K~~~~~~~~~ 97 (238)
++++|.++.|..+++ | +++++++| +|||+|.+++|+ .+.+.+|||+|||||.|+.|.+++.
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l-~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~~---- 76 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEV-AVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDE---- 76 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGC-CTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCE----
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHC-CCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCCE----
Confidence 578889999999987 4 78999999 999999999993 3467899999999999999999987
Q ss_pred CCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhccC
Q psy15159 98 GHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAEE 163 (238)
Q Consensus 98 ~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~~ 163 (238)
+|+||.+.+|.+ +++|+++|.+|++|+|.+++++++
T Consensus 77 --------v~aGt~~~~G~~----------------------~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 77 --------VFGATINNTGVL----------------------KIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp --------ECTTCEECSSCE----------------------EEEEEECGGGSHHHHHHHHHHHHH
T ss_pred --------EEeCCEEeeceE----------------------EEEEEEecCcCHHHHHHHHHHHhh
Confidence 999999999999 999999999999999999987643
No 10
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.87 E-value=4.7e-23 Score=159.14 Aligned_cols=102 Identities=14% Similarity=0.221 Sum_probs=88.9
Q ss_pred hhhhcccchhhhhccCCCccc--c---------cccccCCceeeccEEEecCcc---------eeeeeeccccccCCcce
Q psy15159 26 ESSFTGETEPATKVTSPMLKT--N---------GHTSMRNIAFMGTLVRCGNGK---------GIDLAIDESSFTGETEP 85 (238)
Q Consensus 26 e~~~~~~~~~l~~~~~~~~~v--d---------~~i~~~~L~v~GDiv~l~~G~---------~~~~~vdES~LTGEs~P 85 (238)
++++.+++++|.++.|..+++ | ++|++++| +|||+|.+++|+ .+...||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l-~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELV-QRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTC-CTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHC-CCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCcc
Confidence 457899999999999999887 2 24899999 999999999993 23558999999999999
Q ss_pred eeccCCCCCCCCCCCCCcceeeeccEEEeeeecccCCCCccccchhhhcccceeeEEEEEeCcchhhHhHHHhhhcc
Q psy15159 86 ATKVTSPMLKTNGHTSMRNIAFMGTLVRCGNGKAQLNHPEDYTSMINYKERLIEKGVVVNTGEKSEFGEVFKMMQAE 162 (238)
Q Consensus 86 v~K~~~~~~~~~~~~~~~~~v~aGT~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~tG~~T~~g~i~~~~~~~ 162 (238)
+.|.+++. +|+||.+.+|.+ .++|+++|.+|.+|+|.++++++
T Consensus 81 v~k~~g~~------------v~aGt~~~~G~~----------------------~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGST------------VIAGSINQNGSL----------------------LICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEE------------ECTTCEEESSCC----------------------EEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCE------------EEcCCEEeeeEE----------------------EEEEEEecccCHHHHHHHHHHhh
Confidence 99999877 999999999999 99999999999999999998764
No 11
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=27.04 E-value=16 Score=27.42 Aligned_cols=19 Identities=32% Similarity=0.319 Sum_probs=16.4
Q ss_pred cccccCCceeeccEEEecCc
Q psy15159 48 GHTSMRNIAFMGTLVRCGNG 67 (238)
Q Consensus 48 ~~i~~~~L~v~GDiv~l~~G 67 (238)
..|+.+++ .|||+|..+.|
T Consensus 61 ~~V~~~~l-~pGDLvFf~~~ 79 (135)
T 2k1g_A 61 KSVSRSNL-RTGDLVLFRAG 79 (135)
T ss_dssp EEECGGGC-CTTEEEEEEET
T ss_pred cEecHHHc-cCCcEEEECCC
Confidence 67888999 99999998765
No 12
>2hba_A BL17, 50S ribosomal protein L9; NTL9, K12M, RNA binding protein; 1.25A {Geobacillus stearothermophilus} SCOP: d.100.1.1 PDB: 1cqu_A 2hbb_A 2hvf_A
Probab=24.27 E-value=20 Score=22.46 Aligned_cols=16 Identities=13% Similarity=0.422 Sum_probs=13.6
Q ss_pred cCCceeeccEEEecCc
Q psy15159 52 MRNIAFMGTLVRCGNG 67 (238)
Q Consensus 52 ~~~L~v~GDiv~l~~G 67 (238)
.+.|...||+|.+++|
T Consensus 9 V~~lG~~Gdvv~V~~G 24 (52)
T 2hba_A 9 VKGMGKKGEIKNVADG 24 (52)
T ss_dssp BTTTBCTTCEEECCHH
T ss_pred ccccCcCCCEEEEcCC
Confidence 4566788999999999
No 13
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=22.47 E-value=30 Score=25.66 Aligned_cols=19 Identities=32% Similarity=0.319 Sum_probs=16.0
Q ss_pred cccccCCceeeccEEEecCc
Q psy15159 48 GHTSMRNIAFMGTLVRCGNG 67 (238)
Q Consensus 48 ~~i~~~~L~v~GDiv~l~~G 67 (238)
..++.+++ .|||+|....+
T Consensus 61 ~~v~~~~l-~pGDLvff~~~ 79 (136)
T 2jyx_A 61 KSVSRSNL-RTGDLVLFRAG 79 (136)
T ss_dssp EECCTTTC-CTTEEEEEECS
T ss_pred eEcchHhC-CCCCEEEECCC
Confidence 56778899 99999998765
Done!