Query psy15166
Match_columns 90
No_of_seqs 109 out of 134
Neff 3.9
Searched_HMMs 13730
Date Fri Aug 16 22:16:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15166.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15166hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ibxa_ d.15.2.1 (A:) Caspase- 54.0 0.21 1.5E-05 30.9 -3.7 23 29-51 57-79 (81)
2 d1c9fa_ d.15.2.1 (A:) Caspase- 48.2 0.26 1.9E-05 30.8 -4.0 42 8-51 41-82 (87)
3 d1lghb_ f.3.1.1 (B:) Light-har 47.2 5.1 0.00037 21.9 1.9 12 70-81 4-15 (43)
4 d1d4ba_ d.15.2.1 (A:) Cell dea 46.1 1.7 0.00012 28.5 -0.3 23 29-51 87-109 (122)
5 d1hr6b1 d.185.1.1 (B:24-245) M 35.0 11 0.00077 23.3 2.2 21 22-42 196-216 (222)
6 d1gs0a1 a.41.1.1 (A:207-340) D 32.3 27 0.002 22.0 4.0 37 23-59 67-107 (134)
7 d1efya1 a.41.1.1 (A:662-796) D 32.2 31 0.0022 21.6 4.3 38 22-59 66-107 (135)
8 d1jo5a_ f.3.1.1 (A:) Light-har 32.0 6.5 0.00048 21.8 0.7 13 69-81 8-20 (48)
9 d1t3wa_ a.236.1.1 (A:) DNA pri 31.1 11 0.00083 22.8 1.8 14 70-83 115-128 (134)
10 d1f2ri_ d.15.2.1 (I:) Inhibito 28.6 1.1 8.1E-05 28.5 -3.5 23 29-51 73-95 (100)
11 d2eyqa2 c.37.1.19 (A:349-465) 27.7 25 0.0018 21.0 3.0 46 26-74 24-69 (117)
12 d1hr6a1 d.185.1.1 (A:14-233) M 24.8 21 0.0015 22.5 2.4 21 23-43 198-218 (220)
13 d1opca_ a.4.6.1 (A:) OmpR {Esc 23.8 27 0.0019 19.8 2.5 18 71-88 24-41 (99)
14 d1kx7a_ a.3.1.1 (A:) Mono-heme 22.7 19 0.0014 19.7 1.6 16 68-83 61-76 (81)
15 d1fnoa3 d.58.19.1 (A:208-320) 21.9 20 0.0015 22.5 1.8 29 18-47 20-49 (113)
16 d1f1fa_ a.3.1.1 (A:) Cytochrom 21.8 21 0.0016 19.2 1.7 19 66-84 62-80 (88)
No 1
>d1ibxa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.03 E-value=0.21 Score=30.88 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=20.2
Q ss_pred HHHHhcCCCCCCCCCCChhHHHH
Q psy15166 29 AEYMQQLPAGKLPISGSDGALYR 51 (90)
Q Consensus 29 ~~Ym~~LP~~kvP~~gS~Ge~~R 51 (90)
++||.+||.+-+=++=..|++|+
T Consensus 57 EeYF~tLp~nT~lm~L~~ge~W~ 79 (81)
T d1ibxa_ 57 EDYFPSVPDNAELVLLTLGQAWQ 79 (81)
T ss_dssp SSSCSSCCSCCCEEEECSSSCCC
T ss_pred HHHHhcCCCCcEEEEECCCCccC
Confidence 57999999999988888888874
No 2
>d1c9fa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.23 E-value=0.26 Score=30.84 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=27.3
Q ss_pred CCCCCCCCccchhhhhcHHHHHHHHhcCCCCCCCCCCChhHHHH
Q psy15166 8 KLPISGSDGALYRRQQLEKQAAEYMQQLPAGKLPISGSDGALYR 51 (90)
Q Consensus 8 ~~p~~gSD~~l~~kqQl~e~v~~Ym~~LP~~kvP~~gS~Ge~~R 51 (90)
+||..++-..|.-=+..-+ ++||.+||.+-+=++=..|++|+
T Consensus 41 ~i~~~~~~lvLeeDGT~Vd--EeYF~tLp~nT~lm~L~~gq~W~ 82 (87)
T d1c9fa_ 41 QLPMPGSRLCLYEDGTEVT--DDCFPGLPNDAELLLLTAGETWH 82 (87)
T ss_dssp TCCSTTCEEEETTTTCCBC--TTSCSSCCTTEEEEEECTTCCCC
T ss_pred CCCCcCcEEEEeCCCcEec--HHHHhcCCCCCEEEEECCCCccC
Confidence 4555554344432222222 57999999999888888888874
No 3
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=47.25 E-value=5.1 Score=21.86 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=10.6
Q ss_pred cCCCHHHHHHHH
Q psy15166 70 HNLTADEIKCEK 81 (90)
Q Consensus 70 ~~LseeE~kel~ 81 (90)
.+||++|.+|+.
T Consensus 4 sGLT~~EA~EfH 15 (43)
T d1lghb_ 4 SGLTEEEAIAVH 15 (43)
T ss_dssp SSCCHHHHHHHH
T ss_pred CcCCHHHHHHHH
Confidence 589999999985
No 4
>d1d4ba_ d.15.2.1 (A:) Cell death-inducing effector B (CIDE-B), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.11 E-value=1.7 Score=28.48 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=20.9
Q ss_pred HHHHhcCCCCCCCCCCChhHHHH
Q psy15166 29 AEYMQQLPAGKLPISGSDGALYR 51 (90)
Q Consensus 29 ~~Ym~~LP~~kvP~~gS~Ge~~R 51 (90)
++||.+||.+-+=++=..|++|.
T Consensus 87 EeYFqtL~~nT~lmvL~~gqkW~ 109 (122)
T d1d4ba_ 87 EDFFQLLEDDTCLMVLQSGQSWS 109 (122)
T ss_dssp THHHHHSSSCCCCCEECSSCCCC
T ss_pred hhHhhccCCCCEEEEECCCCccC
Confidence 68999999999999999999883
No 5
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.03 E-value=11 Score=23.28 Aligned_cols=21 Identities=24% Similarity=0.593 Sum_probs=17.0
Q ss_pred hhcHHHHHHHHhcCCCCCCCC
Q psy15166 22 QQLEKQAAEYMQQLPAGKLPI 42 (90)
Q Consensus 22 qQl~e~v~~Ym~~LP~~kvP~ 42 (90)
.++.++|++||..||..+.|+
T Consensus 196 ~~~~~~i~~~f~~lp~~~~p~ 216 (222)
T d1hr6b1 196 EKLVQYAQKYFGHVPKSESPV 216 (222)
T ss_dssp HHHHHHHHHHHTTSCCCSSCC
T ss_pred HHHHHHHHHHHhCCCCCCCCC
Confidence 345678999999999888775
No 6
>d1gs0a1 a.41.1.1 (A:207-340) Domain of poly(ADP-ribose) polymerase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.29 E-value=27 Score=22.00 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=31.4
Q ss_pred hcHHHHHHHHhcCCC----CCCCCCCChhHHHHHHHHHHhc
Q psy15166 23 QLEKQAAEYMQQLPA----GKLPISGSDGALYRRQQLEKQV 59 (90)
Q Consensus 23 Ql~e~v~~Ym~~LP~----~kvP~~gS~Ge~~R~kQL~~QL 59 (90)
.+.++-.+||+.+|- ..-|+.+|.-.-.++.+|+.-|
T Consensus 67 ~l~~lsn~fYtlIPH~fg~~~pp~I~~~~~ik~k~~lLe~L 107 (134)
T d1gs0a1 67 ALVEACNEFYTRIPHDFGLSIPPVIRTEKELSDKVKLLEAL 107 (134)
T ss_dssp HHHHHHHHHHHHSCBCCTTSCCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcccCCCCCCccCCHHHHHHHHHHHHHH
Confidence 466788999999995 6778999999999999988776
No 7
>d1efya1 a.41.1.1 (A:662-796) Domain of poly(ADP-ribose) polymerase {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=32.16 E-value=31 Score=21.63 Aligned_cols=38 Identities=13% Similarity=0.227 Sum_probs=30.1
Q ss_pred hhcHHHHHHHHhcCCC----CCCCCCCChhHHHHHHHHHHhc
Q psy15166 22 QQLEKQAAEYMQQLPA----GKLPISGSDGALYRRQQLEKQV 59 (90)
Q Consensus 22 qQl~e~v~~Ym~~LP~----~kvP~~gS~Ge~~R~kQL~~QL 59 (90)
.++.++-.+||+.+|. ..-|+.+|.-.-.+..+|+.-|
T Consensus 66 ~~l~~lsn~fYtlIPH~fg~~~pp~i~~~~~i~~k~~lLe~L 107 (135)
T d1efya1 66 SQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAKVQMLDNL 107 (135)
T ss_dssp HHHHHHHHHHHHHSCBCCCSSCCCCSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHhCCcccCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4677888999999994 4568889988888888877654
No 8
>d1jo5a_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=32.00 E-value=6.5 Score=21.83 Aligned_cols=13 Identities=15% Similarity=0.148 Sum_probs=11.1
Q ss_pred hcCCCHHHHHHHH
Q psy15166 69 CHNLTADEIKCEK 81 (90)
Q Consensus 69 C~~LseeE~kel~ 81 (90)
=.+||++|.+|+.
T Consensus 8 ~tGLT~~EA~E~H 20 (48)
T d1jo5a_ 8 YTGLTDEQAQELH 20 (48)
T ss_dssp TGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 3689999999985
No 9
>d1t3wa_ a.236.1.1 (A:) DNA primase DnaG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.05 E-value=11 Score=22.76 Aligned_cols=14 Identities=21% Similarity=0.019 Sum_probs=12.0
Q ss_pred cCCCHHHHHHHHHh
Q psy15166 70 HNLTADEIKCEKME 83 (90)
Q Consensus 70 ~~LseeE~kel~~~ 83 (90)
.+||++|+++|+.-
T Consensus 115 ~~Lt~eEk~eL~~L 128 (134)
T d1t3wa_ 115 HGLSNEERLELWTL 128 (134)
T ss_dssp TCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 57999999999864
No 10
>d1f2ri_ d.15.2.1 (I:) Inhibitor of caspase-activated DNase (ICAD), DFF45, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.58 E-value=1.1 Score=28.45 Aligned_cols=23 Identities=13% Similarity=0.219 Sum_probs=17.5
Q ss_pred HHHHhcCCCCCCCCCCChhHHHH
Q psy15166 29 AEYMQQLPAGKLPISGSDGALYR 51 (90)
Q Consensus 29 ~~Ym~~LP~~kvP~~gS~Ge~~R 51 (90)
++||.+||.+-+=++=..|++|.
T Consensus 73 EeYF~tLp~nT~lm~L~~gqkW~ 95 (100)
T d1f2ri_ 73 DDYFLCLPSNTKFVALACNEKWT 95 (100)
T ss_dssp SSSSSSSCSCCEEEEECSSSCCS
T ss_pred HHHHhcCCCCCEEEEECCCCccC
Confidence 57888888888777777777763
No 11
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=27.69 E-value=25 Score=20.99 Aligned_cols=46 Identities=9% Similarity=0.074 Sum_probs=30.1
Q ss_pred HHHHHHHhcCCCCCCCCCCChhHHHHHHHHHHhcCCCCCChhhhcCCCH
Q psy15166 26 KQAAEYMQQLPAGKLPISGSDGALYRRQQLEKQVPLHDLNANLCHNLTA 74 (90)
Q Consensus 26 e~v~~Ym~~LP~~kvP~~gS~Ge~~R~kQL~~QLP~hD~d~~yC~~Lse 74 (90)
+.+..|.+.-...-+=++.|.|...|...++.- |+..+.++.++++
T Consensus 24 ~~L~~~i~~~~~~Vli~a~s~g~~erl~e~L~~---~~i~~~~~~~~~~ 69 (117)
T d2eyqa2 24 DALRKFLETFDGPVVFSVESEGRREALGELLAR---IKIAPQRIMRLDE 69 (117)
T ss_dssp HHHHHHHTTCCSCCCEEESSHHHHHHHHHHHGG---GTCCCEECSSGGG
T ss_pred HHHHHHHHhCCCeEEEEECCccHHHHHHHHHHH---cCCCceEecChhh
Confidence 357888876443333345788877776666654 6777888877653
No 12
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.77 E-value=21 Score=22.52 Aligned_cols=21 Identities=14% Similarity=0.325 Sum_probs=17.1
Q ss_pred hcHHHHHHHHhcCCCCCCCCC
Q psy15166 23 QLEKQAAEYMQQLPAGKLPIS 43 (90)
Q Consensus 23 Ql~e~v~~Ym~~LP~~kvP~~ 43 (90)
.+.++|.+||..+|..+-|+.
T Consensus 198 ~~~~~i~~~fg~~~~~~~p~~ 218 (220)
T d1hr6a1 198 KALELTGKYLGDWQSTHPPIT 218 (220)
T ss_dssp HHHHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHHHHhcCCCCCCCCCC
Confidence 345689999999999988874
No 13
>d1opca_ a.4.6.1 (A:) OmpR {Escherichia coli [TaxId: 562]}
Probab=23.82 E-value=27 Score=19.81 Aligned_cols=18 Identities=28% Similarity=0.226 Sum_probs=16.3
Q ss_pred CCCHHHHHHHHHhhhhhc
Q psy15166 71 NLTADEIKCEKMECQHME 88 (90)
Q Consensus 71 ~LseeE~kel~~~~~~~~ 88 (90)
.||+.|.+-|++||+|..
T Consensus 24 ~Lt~~E~~lL~~L~~~~g 41 (99)
T d1opca_ 24 PLTSGEFAVLKALVSHPR 41 (99)
T ss_dssp CCCHHHHHHHHHHHHSTT
T ss_pred EcCHHHHHHHHHHHhccc
Confidence 699999999999999864
No 14
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=22.74 E-value=19 Score=19.67 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=12.5
Q ss_pred hhcCCCHHHHHHHHHh
Q psy15166 68 LCHNLTADEIKCEKME 83 (90)
Q Consensus 68 yC~~LseeE~kel~~~ 83 (90)
.+..||++|++.+--|
T Consensus 61 ~~~~Lsd~ei~~v~~Y 76 (81)
T d1kx7a_ 61 MCTDCTDEDYKAAIEF 76 (81)
T ss_dssp TCSSCCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 5678999999887543
No 15
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]}
Probab=21.90 E-value=20 Score=22.46 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=21.8
Q ss_pred chhhhhcHH-HHHHHHhcCCCCCCCCCCChh
Q psy15166 18 LYRRQQLEK-QAAEYMQQLPAGKLPISGSDG 47 (90)
Q Consensus 18 l~~kqQl~e-~v~~Ym~~LP~~kvP~~gS~G 47 (90)
-|-++-|.- ++.+|.+.||.+.+|- -|+|
T Consensus 20 AKgkMvNA~~~A~ef~~~LP~~e~PE-~Teg 49 (113)
T d1fnoa3 20 AKGVMVNALSLAARIHAEVPADEAPE-TTEG 49 (113)
T ss_dssp CTTTCBCHHHHHHHHHHTSCTTSSGG-GCCT
T ss_pred hhhHHHhHHHHHHHHHHhCCCCCCCC-ccCC
Confidence 344555544 5889999999999998 5665
No 16
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=21.79 E-value=21 Score=19.19 Aligned_cols=19 Identities=11% Similarity=-0.004 Sum_probs=14.5
Q ss_pred hhhhcCCCHHHHHHHHHhh
Q psy15166 66 ANLCHNLTADEIKCEKMEC 84 (90)
Q Consensus 66 ~~yC~~LseeE~kel~~~~ 84 (90)
|.+...||++|+..+-.|-
T Consensus 62 p~~~~~Lsd~ei~~v~aYi 80 (88)
T d1f1fa_ 62 PGFNGRLSPLQIEDVAAYV 80 (88)
T ss_dssp CCCTTTSCHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHH
Confidence 4456679999999887664
Done!