Query psy15167
Match_columns 75
No_of_seqs 64 out of 66
Neff 2.6
Searched_HMMs 13730
Date Fri Aug 16 22:16:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15167.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15167hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g47a1 g.39.1.3 (A:1-35) Pinc 63.4 1.5 0.00011 23.2 1.4 15 56-73 6-20 (35)
2 d1k3xa3 g.39.1.8 (A:223-262) E 45.2 3.8 0.00027 21.2 1.1 11 56-66 11-21 (40)
3 d1k82a3 g.39.1.8 (A:225-268) D 42.3 4.4 0.00032 21.1 1.1 12 55-66 14-25 (44)
4 d1r2za3 g.39.1.8 (A:229-274) D 40.1 5 0.00036 21.0 1.1 12 54-65 15-26 (46)
5 d1tdza3 g.39.1.8 (A:225-271) D 37.0 6 0.00044 20.8 1.1 12 54-65 15-26 (47)
6 d1lbaa_ d.118.1.1 (A:) Bacteri 35.8 2.5 0.00019 25.4 -0.7 21 48-75 114-134 (146)
7 d1dl0a_ g.3.6.2 (A:) J-atracot 30.9 13 0.00098 19.3 1.8 17 54-70 4-20 (37)
8 d1dmca_ g.46.1.1 (A:) Metallot 25.8 12 0.00089 18.9 1.0 10 58-67 1-10 (31)
9 d1ee8a3 g.39.1.8 (A:211-266) D 22.8 15 0.0011 19.7 1.1 11 55-65 23-33 (56)
10 d1cxya_ d.120.1.1 (A:) Cytochr 22.8 15 0.0011 20.3 1.2 26 2-30 33-58 (81)
11 d2bi6h1 g.3.12.1 (H:8-31) Brom 22.5 13 0.00098 18.1 0.8 7 65-71 5-11 (26)
12 d1jaea2 c.1.8.1 (A:1-378) Anim 22.1 8.6 0.00062 24.9 -0.1 8 2-9 311-318 (378)
13 d1hvwa_ g.3.6.2 (A:) Atracotox 21.2 14 0.001 18.0 0.7 14 56-69 4-21 (26)
14 d1cyoa_ d.120.1.1 (A:) Cytochr 21.2 11 0.00077 21.4 0.2 24 2-28 35-58 (88)
No 1
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.41 E-value=1.5 Score=23.22 Aligned_cols=15 Identities=33% Similarity=0.760 Sum_probs=12.2
Q ss_pred CCcccccCCCCCCCCccc
Q psy15167 56 AGSPCLQCKDNCPGLDLH 73 (75)
Q Consensus 56 ~GaPClkCk~~CpGFeLH 73 (75)
+.+-|.+|++ ||++|
T Consensus 6 ~~~~C~RC~~---gF~p~ 20 (35)
T d1g47a1 6 ASATCERCKG---GFAPA 20 (35)
T ss_dssp CCCBCSSSCC---BCCST
T ss_pred HHHHHHHHcc---CCCch
Confidence 4678999965 99987
No 2
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=45.24 E-value=3.8 Score=21.18 Aligned_cols=11 Identities=36% Similarity=0.981 Sum_probs=8.9
Q ss_pred CCcccccCCCC
Q psy15167 56 AGSPCLQCKDN 66 (75)
Q Consensus 56 ~GaPClkCk~~ 66 (75)
+|.||..|++.
T Consensus 11 ~g~pC~~C~~~ 21 (40)
T d1k3xa3 11 DGEPCERCGSI 21 (40)
T ss_dssp TTSBCTTTCCB
T ss_pred CCCccCcCCCE
Confidence 48999999763
No 3
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=42.27 E-value=4.4 Score=21.12 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=9.3
Q ss_pred CCCcccccCCCC
Q psy15167 55 GAGSPCLQCKDN 66 (75)
Q Consensus 55 ~~GaPClkCk~~ 66 (75)
-+|.||.+|+..
T Consensus 14 R~g~~C~~C~~~ 25 (44)
T d1k82a3 14 RKGEPCRVCGTP 25 (44)
T ss_dssp CTTSBCTTTCCB
T ss_pred CCCCCcCCCCCE
Confidence 358999999753
No 4
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=40.09 E-value=5 Score=20.97 Aligned_cols=12 Identities=33% Similarity=0.855 Sum_probs=9.4
Q ss_pred CCCCcccccCCC
Q psy15167 54 LGAGSPCLQCKD 65 (75)
Q Consensus 54 ~~~GaPClkCk~ 65 (75)
.-+|.||.+|+.
T Consensus 15 gR~g~~C~~C~~ 26 (46)
T d1r2za3 15 GRQGNPCKRCGT 26 (46)
T ss_dssp TCTTSBCTTTCC
T ss_pred CCCCCccCCCCC
Confidence 346899999975
No 5
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=36.97 E-value=6 Score=20.78 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=9.4
Q ss_pred CCCCcccccCCC
Q psy15167 54 LGAGSPCLQCKD 65 (75)
Q Consensus 54 ~~~GaPClkCk~ 65 (75)
.-.|.||.+|++
T Consensus 15 gR~g~~C~~C~~ 26 (47)
T d1tdza3 15 GKTGEKCSRCGA 26 (47)
T ss_dssp TCTTSBCTTTCC
T ss_pred CCCCCCcCCCCc
Confidence 345899999975
No 6
>d1lbaa_ d.118.1.1 (A:) Bacteriophage T7 lysozyme (Zn amidase) {Bacteriophage T7 [TaxId: 10760]}
Probab=35.76 E-value=2.5 Score=25.41 Aligned_cols=21 Identities=38% Similarity=0.623 Sum_probs=13.6
Q ss_pred CcceecCCCCcccccCCCCCCCCcccCC
Q psy15167 48 HKLAHDLGAGSPCLQCKDNCPGLDLHFW 75 (75)
Q Consensus 48 ~~L~he~~~GaPClkCk~~CpGFeLHfW 75 (75)
..++|..-.. -.||||++--|
T Consensus 114 ~I~gH~d~~~-------k~CPGf~~~~~ 134 (146)
T d1lbaa_ 114 VLRAHHEVAP-------KACPSFDLKRW 134 (146)
T ss_dssp EEEEGGGTSS-------SCTTSBCHHHH
T ss_pred EEEeccCCCC-------CCCcCcCHHHH
Confidence 3567765442 36999997544
No 7
>d1dl0a_ g.3.6.2 (A:) J-atracotoxin-hv1c {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=30.87 E-value=13 Score=19.34 Aligned_cols=17 Identities=47% Similarity=1.095 Sum_probs=12.9
Q ss_pred CCCCcccccCCCCCCCC
Q psy15167 54 LGAGSPCLQCKDNCPGL 70 (75)
Q Consensus 54 ~~~GaPClkCk~~CpGF 70 (75)
.++..||..|-.-|||-
T Consensus 4 tgadrpcaaccpccpgt 20 (37)
T d1dl0a_ 4 TGADRPCAACCPCCPGT 20 (37)
T ss_dssp CCTTSBCCSSCCCCTTE
T ss_pred cCCCCccccccCCCCCC
Confidence 35677999987778884
No 8
>d1dmca_ g.46.1.1 (A:) Metallothionein {Crab (Callinectes sapidus), alpha and beta domains [TaxId: 6763]}
Probab=25.77 E-value=12 Score=18.89 Aligned_cols=10 Identities=50% Similarity=1.504 Sum_probs=6.9
Q ss_pred cccccCCCCC
Q psy15167 58 SPCLQCKDNC 67 (75)
Q Consensus 58 aPClkCk~~C 67 (75)
.||++|-+-|
T Consensus 1 spcqkctsgc 10 (31)
T d1dmca_ 1 SPCQKCTSGC 10 (31)
T ss_dssp CCCTTTTTTC
T ss_pred Cccchhcccc
Confidence 3788876655
No 9
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=22.79 E-value=15 Score=19.68 Aligned_cols=11 Identities=36% Similarity=0.915 Sum_probs=8.8
Q ss_pred CCCcccccCCC
Q psy15167 55 GAGSPCLQCKD 65 (75)
Q Consensus 55 ~~GaPClkCk~ 65 (75)
-.|.||..|+.
T Consensus 23 r~g~~C~~C~~ 33 (56)
T d1ee8a3 23 REGLPCPACGR 33 (56)
T ss_dssp CTTSBCTTTCC
T ss_pred CCCcccccCCc
Confidence 45889999975
No 10
>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}
Probab=22.77 E-value=15 Score=20.28 Aligned_cols=26 Identities=19% Similarity=0.235 Sum_probs=16.9
Q ss_pred ccccCCCCCCCcchhhccccccCCchhhh
Q psy15167 2 FMFTHPGGPDTNHVQRSQIGTRSGRWLSV 30 (75)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~wls~ 30 (75)
|+-.||||.+. -....|.-+-+++..
T Consensus 33 f~~~HPGG~~~---l~~~aGkD~t~~F~~ 58 (81)
T d1cxya_ 33 YVPNHPGPAGM---MLVWCGQESTEAWET 58 (81)
T ss_dssp TGGGCCSSTTT---TGGGTTSBCHHHHHH
T ss_pred eeecCCCcHHH---HHHHcCCcchHHHHh
Confidence 56679999753 345567766666643
No 11
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=22.55 E-value=13 Score=18.09 Aligned_cols=7 Identities=43% Similarity=1.293 Sum_probs=5.3
Q ss_pred CCCCCCc
Q psy15167 65 DNCPGLD 71 (75)
Q Consensus 65 ~~CpGFe 71 (75)
+.||||-
T Consensus 5 sdcpgfc 11 (26)
T d2bi6h1 5 SDCPGFC 11 (26)
T ss_dssp SSCCTTC
T ss_pred ccCchHH
Confidence 4699984
No 12
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=22.09 E-value=8.6 Score=24.87 Aligned_cols=8 Identities=63% Similarity=1.252 Sum_probs=6.4
Q ss_pred ccccCCCC
Q psy15167 2 FMFTHPGG 9 (75)
Q Consensus 2 ~~~~~~~~ 9 (75)
||+|||||
T Consensus 311 f~lt~p~G 318 (378)
T d1jaea2 311 FMLAHPYG 318 (378)
T ss_dssp HHHHSCSS
T ss_pred HHHHcCCC
Confidence 79999953
No 13
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=21.24 E-value=14 Score=17.99 Aligned_cols=14 Identities=43% Similarity=1.298 Sum_probs=9.0
Q ss_pred CCccccc----CCCCCCC
Q psy15167 56 AGSPCLQ----CKDNCPG 69 (75)
Q Consensus 56 ~GaPClk----Ck~~CpG 69 (75)
.|+||.- |...|.|
T Consensus 4 sgqpcpynenccsqsctg 21 (26)
T d1hvwa_ 4 SGQPCPYNENCCSQSCTG 21 (26)
T ss_dssp TTSBCSSTTSBSSCCEET
T ss_pred CCCcCCCCcccccccccC
Confidence 5888865 5555554
No 14
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.19 E-value=11 Score=21.41 Aligned_cols=24 Identities=33% Similarity=0.612 Sum_probs=13.8
Q ss_pred ccccCCCCCCCcchhhccccccCCchh
Q psy15167 2 FMFTHPGGPDTNHVQRSQIGTRSGRWL 28 (75)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~wl 28 (75)
|+-.||||.+. -....|.-+-+.+
T Consensus 35 f~~~HPGG~~~---i~~~aG~D~T~~F 58 (88)
T d1cyoa_ 35 FLEEHPGGEEV---LREQAGGDATENF 58 (88)
T ss_dssp TTTTCTTCSHH---HHHHTTSBCHHHH
T ss_pred hhcccCCchHH---HHHHcCCchHHHH
Confidence 56679999753 3334455444443
Done!