Query psy15170
Match_columns 233
No_of_seqs 294 out of 1147
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 22:21:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15170.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15170hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3drz_A BTB/POZ domain-containi 100.0 4.5E-31 1.5E-35 205.3 6.2 100 3-103 4-104 (107)
2 3kvt_A Potassium channel prote 100.0 4.8E-30 1.7E-34 202.5 9.6 92 1-95 1-92 (115)
3 3drx_A BTB/POZ domain-containi 100.0 5.6E-30 1.9E-34 219.7 7.6 137 3-159 10-147 (202)
4 1t1d_A Protein (potassium chan 100.0 2.9E-29 9.9E-34 193.6 7.8 89 5-96 1-90 (100)
5 1s1g_A Potassium voltage-gated 99.9 4.7E-28 1.6E-32 193.5 7.7 90 3-96 11-100 (124)
6 1nn7_A Potassium channel KV4.2 99.9 6.4E-28 2.2E-32 187.4 6.3 86 6-95 1-86 (105)
7 2nz0_B Potassium voltage-gated 99.9 1.1E-27 3.8E-32 195.0 7.1 91 2-96 32-122 (140)
8 2r9r_B Paddle chimera voltage 99.9 1.7E-22 5.8E-27 193.8 6.5 91 3-96 50-141 (514)
9 1r29_A B-cell lymphoma 6 prote 98.4 3.4E-07 1.1E-11 70.9 5.0 90 6-102 31-122 (127)
10 2vpk_A Myoneurin; transcriptio 98.3 8.2E-07 2.8E-11 67.6 4.8 87 6-102 24-113 (116)
11 2yy9_A Zinc finger and BTB dom 98.1 2E-06 6.8E-11 67.6 4.7 89 6-104 27-116 (135)
12 3b84_A Zinc finger and BTB dom 98.1 2.1E-06 7.2E-11 65.9 4.7 88 6-103 26-114 (119)
13 2vkp_A BTB/POZ domain-containi 98.1 2.2E-06 7.4E-11 64.2 4.6 90 6-102 10-104 (109)
14 2if5_A Zinc finger and BTB dom 98.1 2.3E-06 7.8E-11 65.4 3.7 90 6-101 27-117 (120)
15 3ohu_A Transcription regulator 98.1 2.3E-06 7.8E-11 65.9 3.6 87 7-101 35-123 (125)
16 2ppi_A Gigaxonin; BTB domain, 98.1 2.4E-06 8.3E-11 68.0 3.8 93 6-102 49-142 (144)
17 3ga1_A Nucleus accumbens-assoc 98.1 1.2E-06 4.1E-11 68.1 1.9 86 7-102 36-123 (129)
18 2ihc_A Transcription regulator 98.0 2.7E-06 9.3E-11 65.7 2.3 89 6-102 31-121 (124)
19 2z8h_A Transcription regulator 97.9 6.2E-06 2.1E-10 64.8 4.3 91 6-104 38-130 (138)
20 1buo_A POZ domain, protein (pr 97.9 6.4E-06 2.2E-10 63.2 4.1 86 6-102 30-116 (121)
21 3htm_A Speckle-type POZ protei 97.9 5.6E-06 1.9E-10 66.4 3.5 92 7-104 37-129 (172)
22 2q81_A MIZ-1 protein; BTB/POZ 97.9 4.7E-06 1.6E-10 63.9 2.9 86 6-102 29-115 (119)
23 4eoz_A Speckle-type POZ protei 97.8 4E-06 1.4E-10 65.5 1.4 93 6-104 27-120 (145)
24 3hve_A Gigaxonin; ubiquitin, c 97.7 2.3E-05 8E-10 67.2 4.1 94 6-103 33-127 (256)
25 3i3n_A Kelch-like protein 11; 97.6 4.2E-05 1.4E-09 66.5 4.8 91 7-103 35-135 (279)
26 3fkc_A Transcriptional regulat 97.6 4.9E-05 1.7E-09 58.1 4.2 80 7-97 34-115 (116)
27 3m5b_A Zinc finger and BTB dom 97.5 0.00011 3.6E-09 56.8 5.3 81 7-102 33-114 (119)
28 3hqi_A Speckle-type POZ protei 97.4 8.4E-05 2.9E-09 65.4 3.6 93 6-104 176-269 (312)
29 2ast_A S-phase kinase-associat 92.7 0.081 2.8E-06 42.5 3.5 90 7-102 3-121 (159)
30 1fs1_B SKP1, cyclin A/CDK2-ass 83.9 0.32 1.1E-05 38.3 1.1 87 7-102 4-116 (141)
31 2p1m_A SKP1-like protein 1A; F 79.8 0.41 1.4E-05 38.5 0.3 88 5-102 4-120 (160)
32 4ajy_C Transcription elongatio 70.5 3.3 0.00011 30.1 3.2 80 7-91 4-96 (97)
33 3v7d_A Suppressor of kinetocho 65.3 4.4 0.00015 32.7 3.2 99 1-102 4-128 (169)
34 4acj_A WU\:FB25H12 protein,; i 53.4 6.9 0.00024 31.5 2.4 46 112-163 29-80 (167)
35 1hv2_A Elongin C, ELC1; protei 34.2 47 0.0016 24.1 4.2 61 4-70 3-65 (99)
36 2ha8_A TAR (HIV-1) RNA loop bi 28.8 94 0.0032 24.9 5.5 25 176-200 85-109 (184)
37 2y5c_A Adrenodoxin-like protei 27.4 18 0.0006 26.5 0.8 23 183-205 28-51 (109)
38 1t3u_A Conserved hypothetical 25.5 42 0.0015 24.4 2.6 19 1-19 1-19 (104)
39 1jg5_A GTP cyclohydrolase I fe 24.3 40 0.0014 24.3 2.1 20 182-201 54-73 (83)
40 2ldu_A Heat shock factor prote 23.6 53 0.0018 25.2 2.9 25 174-198 62-86 (125)
41 2fnj_C Transcription elongatio 23.1 67 0.0023 23.0 3.2 82 6-92 2-96 (96)
42 1hh1_A Holliday junction resol 22.1 55 0.0019 25.8 2.8 25 177-201 8-33 (143)
43 3ah7_A [2Fe-2S]ferredoxin; [2F 21.9 27 0.00093 25.6 0.9 23 183-205 27-50 (113)
44 1e2b_A Enzyme IIB-cellobiose; 21.5 35 0.0012 25.1 1.4 13 193-205 5-17 (106)
45 1vcb_B Protein (elongin C); tu 21.5 49 0.0017 24.7 2.3 64 4-70 16-81 (112)
46 1zjr_A TRNA (guanosine-2'-O-)- 21.4 1.4E+02 0.0047 24.5 5.3 23 177-199 83-105 (211)
47 1uwm_A Ferredoxin VI, FDVI; el 21.2 25 0.00084 25.5 0.5 23 183-205 23-47 (106)
No 1
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=99.96 E-value=4.5e-31 Score=205.27 Aligned_cols=100 Identities=35% Similarity=0.606 Sum_probs=89.0
Q ss_pred CCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCC-CCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchHH
Q psy15170 3 YPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPEN-SPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREKE 81 (233)
Q Consensus 3 ~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~-~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~~ 81 (233)
.+++|+|||||++|+|+++||+++|+|+|++||++... ....|++|+|||||||.+|++||||||+|++++|++++. .
T Consensus 4 ~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~p~~~~~-~ 82 (107)
T 3drz_A 4 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAE-E 82 (107)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCCCTTSCH-H
T ss_pred CCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCCCCCCCH-H
Confidence 57899999999999999999999999999999986421 123568899999999999999999999999999999986 5
Q ss_pred HHHHHHHhcCChhHHHhccccc
Q psy15170 82 RLRQEAIYYGLPAMIDSIFHSD 103 (233)
Q Consensus 82 ~L~~EA~fy~L~~Li~~l~~~~ 103 (233)
.|++||+||+|.+|+++|++++
T Consensus 83 ~l~~Ea~fy~l~~L~~~l~~~i 104 (107)
T 3drz_A 83 GVLEEAEFYNITSLIKLVKDKI 104 (107)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHH
Confidence 6999999999999999998754
No 2
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=99.96 E-value=4.8e-30 Score=202.52 Aligned_cols=92 Identities=25% Similarity=0.412 Sum_probs=82.6
Q ss_pred CCCCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchH
Q psy15170 1 MEYPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREK 80 (233)
Q Consensus 1 m~~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~ 80 (233)
|+.+++|+|||||++|+|+++||+++|+|+|++|+++. ...++.+|+|||||||.+|++||||||+|++++|++++.
T Consensus 1 m~~~~~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~--~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p~~~~~- 77 (115)
T 3kvt_A 1 MDAENRVIINVGGIRHETYKATLKKIPATRLSRLTEGM--LNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPTDVCG- 77 (115)
T ss_dssp ---CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTS--TTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCSSSCH-
T ss_pred CCCCCEEEEEECCEEEEecHHHHhcCCCccHHHHhcCC--CCCCCCCCcEEEecChHHHHHHHHHhcCCCCCCCCcccH-
Confidence 88899999999999999999999999999999999863 235678999999999999999999999999999999875
Q ss_pred HHHHHHHHhcCChhH
Q psy15170 81 ERLRQEAIYYGLPAM 95 (233)
Q Consensus 81 ~~L~~EA~fy~L~~L 95 (233)
..|++||+||+|.++
T Consensus 78 ~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 78 PLFEEELEFWGLDSN 92 (115)
T ss_dssp HHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHhCCChH
Confidence 579999999999986
No 3
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=99.96 E-value=5.6e-30 Score=219.66 Aligned_cols=137 Identities=29% Similarity=0.530 Sum_probs=109.2
Q ss_pred CCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCC-CCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchHH
Q psy15170 3 YPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPEN-SPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREKE 81 (233)
Q Consensus 3 ~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~-~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~~ 81 (233)
.+++|+|||||++|+|+++||+++|+|+|++||++... ....|.+|+|||||||.+|++||||||+|+|++|+++++.
T Consensus 10 ~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L~lP~~~~~~- 88 (202)
T 3drx_A 10 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE- 88 (202)
T ss_dssp CCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCCCCCTTSCHH-
T ss_pred CCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCCccCCCCCCCHH-
Confidence 56899999999999999999999999999999986521 2246789999999999999999999999999999999864
Q ss_pred HHHHHHHhcCChhHHHhcccccccCCCCceEEEeeecccccccCCchhhhhceeeeEEEEeeeecccccccccccCCC
Q psy15170 82 RLRQEAIYYGLPAMIDSIFHSDDSKRGAGYITIGYRGSFAFGRDGLADVKFRKITRILVCGRVTLCRDVFGETLNESR 159 (233)
Q Consensus 82 ~L~~EA~fy~L~~Li~~l~~~~~~~~~~~~i~i~yr~~~~~~rd~~~~~~f~~~~ri~v~~~~~l~~~vFg~~~n~s~ 159 (233)
.|++||+||+|.+|++.|+++.... .. +-.+... .++.||+.|.+.+|...|-. ....|
T Consensus 89 ~l~eEA~FygL~~Lv~~l~~~i~er-e~--------------~~~~~~~--k~v~~v~qc~~~el~~~~s~--~~d~~ 147 (202)
T 3drx_A 89 GVLEEAEFYNITSLIKLVKDKIRER-DS--------------KTSQVPV--KHVYRVLQCQEEELTQMVST--MSDGW 147 (202)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-HH--------------HHCCCSC--CCEEEEEEECSTHHHHHHHT--CCTTC
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHH-hc--------------ccccCCC--cceeeeeeCCHHHHHHHHHh--hcccc
Confidence 5999999999999999998765431 00 0001111 25789999999988877643 33445
No 4
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=99.96 E-value=2.9e-29 Score=193.64 Aligned_cols=89 Identities=21% Similarity=0.334 Sum_probs=80.4
Q ss_pred CeEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhcc-ceecCCCCcchHHHH
Q psy15170 5 AIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRN-QMLILPESFREKERL 83 (233)
Q Consensus 5 ~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~-g~l~lP~~~~e~~~L 83 (233)
++|+|||||++|+|+++||+++|+|+|++|++.. ....+.+|+|||||||.+|++||||||+ |++++|++++ ...|
T Consensus 1 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~--~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p~~~~-~~~~ 77 (100)
T 1t1d_A 1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRN--RYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVP-LDVF 77 (100)
T ss_dssp CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHG--GGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTTSC-HHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCccccchhccc--cccCCCceeEEEcCChHHHHHHHHHHhcCCcccCCCCCC-HHHH
Confidence 5799999999999999999999999999998742 2355689999999999999999999999 9999999997 4679
Q ss_pred HHHHHhcCChhHH
Q psy15170 84 RQEAIYYGLPAMI 96 (233)
Q Consensus 84 ~~EA~fy~L~~Li 96 (233)
++||+||+|.+++
T Consensus 78 ~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 78 SEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHTTCCHHH
T ss_pred HHHHHHcCCCHHH
Confidence 9999999999873
No 5
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=99.95 E-value=4.7e-28 Score=193.48 Aligned_cols=90 Identities=27% Similarity=0.422 Sum_probs=80.4
Q ss_pred CCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchHHH
Q psy15170 3 YPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREKER 82 (233)
Q Consensus 3 ~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~~~ 82 (233)
.+++|+|||||++|+|+++||+++|+|+|++ +++ .....+.+|+|||||||.+|++||||||+|+|++|++++ +..
T Consensus 11 ~~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~--~~~-~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p~~~~-~~~ 86 (124)
T 1s1g_A 11 QDELIVLNVSGRRFQTWRTTLERYPDTLLGS--TEK-EFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYEC-ISA 86 (124)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSTTSSTTS--SGG-GGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCCTTSC-HHH
T ss_pred CCCEEEEEeCCEEEEEeHHHHhcCCCceecc--cCC-cccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCCCCcC-HHH
Confidence 4589999999999999999999999999998 443 234678899999999999999999999999999999986 567
Q ss_pred HHHHHHhcCChhHH
Q psy15170 83 LRQEAIYYGLPAMI 96 (233)
Q Consensus 83 L~~EA~fy~L~~Li 96 (233)
|++||+||+|.+++
T Consensus 87 l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 87 YDDELAFYGILPEI 100 (124)
T ss_dssp HHHHHHHTTCCGGG
T ss_pred HHHHHHHcCCChHH
Confidence 99999999999883
No 6
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=99.94 E-value=6.4e-28 Score=187.37 Aligned_cols=86 Identities=26% Similarity=0.419 Sum_probs=77.5
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchHHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREKERLRQ 85 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~~ 85 (233)
+|+|||||++|+|+++||+++|+|+|+++ ++ .....+.+|+|||||||.+|++||||||+|++++|++++ ...|++
T Consensus 1 ~V~LNVGG~~f~t~~~TL~~~p~s~L~~~--~~-~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p~~~~-~~~l~~ 76 (105)
T 1nn7_A 1 LIVLNVSGTRFQTWQDTLERYPDTLLGSS--ER-DFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHEC-ISAYDE 76 (105)
T ss_dssp CEEEEETTEEEEECHHHHHTSCSSSTTSG--GG-GGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCTTSC-HHHHHH
T ss_pred CEEEEECCEEEEEeHHHHhcCCCcccccc--CC-cccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCCCCcC-HHHHHH
Confidence 58999999999999999999999999993 22 234567899999999999999999999999999999986 567999
Q ss_pred HHHhcCChhH
Q psy15170 86 EAIYYGLPAM 95 (233)
Q Consensus 86 EA~fy~L~~L 95 (233)
||+||+|.++
T Consensus 77 Ea~fy~i~~l 86 (105)
T 1nn7_A 77 ELAFFGLIPE 86 (105)
T ss_dssp HHHHHTCCSC
T ss_pred HHHHcCCCHH
Confidence 9999999987
No 7
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=99.94 E-value=1.1e-27 Score=195.00 Aligned_cols=91 Identities=26% Similarity=0.419 Sum_probs=81.6
Q ss_pred CCCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhccceecCCCCcchHH
Q psy15170 2 EYPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRNQMLILPESFREKE 81 (233)
Q Consensus 2 ~~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~g~l~lP~~~~e~~ 81 (233)
..+++|+|||||++|+|+++||+++|+|+|+. +++ .....+.+|+|||||||.+|++||||||+|+|++|++++ +.
T Consensus 32 ~~~~~V~LNVGG~~F~T~~~TL~~~P~S~L~~--~~~-~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p~~~~-~~ 107 (140)
T 2nz0_B 32 RQDELIVLNVSGRRFQTWRTTLERYPDTLLGS--TEK-EFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYEC-IS 107 (140)
T ss_dssp TCCCEEEEEETTEEEEEEHHHHHTCTTSTTTS--GGG-GGSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCCTTSC-HH
T ss_pred CCCCEEEEEECCEEEEeeHHHHhcCCCeeecc--cCC-cccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCCCCcC-HH
Confidence 35689999999999999999999999999998 333 234678899999999999999999999999999999987 56
Q ss_pred HHHHHHHhcCChhHH
Q psy15170 82 RLRQEAIYYGLPAMI 96 (233)
Q Consensus 82 ~L~~EA~fy~L~~Li 96 (233)
.|++||+||+|.+++
T Consensus 108 ~l~eEa~fy~i~~l~ 122 (140)
T 2nz0_B 108 AYDDELAFYGILPEI 122 (140)
T ss_dssp HHHHHHHHHTCCGGG
T ss_pred HHHHHHHHcCCChHH
Confidence 799999999999983
No 8
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.86 E-value=1.7e-22 Score=193.77 Aligned_cols=91 Identities=21% Similarity=0.311 Sum_probs=81.7
Q ss_pred CCCeEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEcCCCCchHHHhhhhcc-ceecCCCCcchHH
Q psy15170 3 YPAIVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFIDRDGVLFRYVLDYLRN-QMLILPESFREKE 81 (233)
Q Consensus 3 ~~~~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFIDRDp~~F~~ILnyLR~-g~l~lP~~~~e~~ 81 (233)
.+++|+|||||++|+|+++||+++|+|+|+++++.. ...++.+|+|||||||.+|++||||||+ |+|++|++++. .
T Consensus 50 ~~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~--~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~~p~~~~~-~ 126 (514)
T 2r9r_B 50 SSERVVINISGLRFETQLKTLAQFPETLLGDPKKRM--RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPL-D 126 (514)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHG--GGEETTTTEEEECSCHHHHHHHHHHHHHTSCCCCCTTSCH-H
T ss_pred CCCEEEEEeCCEEEEecHHHHhcCCCCcccccccCC--cccCCCCCCEEEcCChHHHHHHHHHHhcCCccccCCcccH-H
Confidence 367999999999999999999999999999998642 3356789999999999999999999999 99999999985 5
Q ss_pred HHHHHHHhcCChhHH
Q psy15170 82 RLRQEAIYYGLPAMI 96 (233)
Q Consensus 82 ~L~~EA~fy~L~~Li 96 (233)
.+++||+||+|.++.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 799999999999863
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.37 E-value=3.4e-07 Score=70.86 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=75.2
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE--cCCCCchHHHhhhhccceecCCCCcchHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI--DRDGVLFRYVLDYLRNQMLILPESFREKERL 83 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI--DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L 83 (233)
-|+|.|||+.|..-|..|.... .+|..||.+.+.+ ....+-| |-++..|+.+|+|+.+|++.++.+ ....|
T Consensus 31 Dv~l~v~~~~~~aHk~iLaa~S-~~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~--~~~~l 103 (127)
T 1r29_A 31 DVVIVVSREQFRAHKTVLMACS-GLFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSRLNLREG--NIMAV 103 (127)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTT--THHHH
T ss_pred CEEEEECCEEEehHHHHHHHhC-HHHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHH--HHHHH
Confidence 3889999999999999997653 4999999875322 5677888 679999999999999999988664 35579
Q ss_pred HHHHHhcCChhHHHhcccc
Q psy15170 84 RQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 84 ~~EA~fy~L~~Li~~l~~~ 102 (233)
+.-|++|+++.|.+.|++.
T Consensus 104 l~~A~~~~i~~L~~~c~~~ 122 (127)
T 1r29_A 104 MATAMYLQMEHVVDTCRKF 122 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHH
Confidence 9999999999999998754
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.26 E-value=8.2e-07 Score=67.60 Aligned_cols=87 Identities=11% Similarity=0.216 Sum_probs=72.0
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEc---CCCCchHHHhhhhccceecCCCCcchHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFID---RDGVLFRYVLDYLRNQMLILPESFREKER 82 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFID---RDp~~F~~ILnyLR~g~l~lP~~~~e~~~ 82 (233)
-|+|.|||+.|..-|..|.... .+|..||.+. ..+.+-|+ -++..|+.+|+|+.+|++.++.+ ....
T Consensus 24 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~--~v~~ 93 (116)
T 2vpk_A 24 DCTIVIGEFQFKAHRNVLASFS-EYFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSW--NVKE 93 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTT--THHH
T ss_pred cEEEEECCEEEeccHHHHhhcC-HHHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHH--HHHH
Confidence 3789999999999999997653 4899999863 24456554 68999999999999999988765 3557
Q ss_pred HHHHHHhcCChhHHHhcccc
Q psy15170 83 LRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 83 L~~EA~fy~L~~Li~~l~~~ 102 (233)
++.-|++|+++.|++.|++.
T Consensus 94 ll~~A~~~~i~~L~~~C~~~ 113 (116)
T 2vpk_A 94 IHQAADYLKVEEVVTKCKIK 113 (116)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999988653
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.13 E-value=2e-06 Score=67.62 Aligned_cols=89 Identities=16% Similarity=0.300 Sum_probs=71.5
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||.+.. ...+-| |-++..|+.||+|+.+|++.++.+ ....|+
T Consensus 27 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~-------~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~--~v~~ll 96 (135)
T 2yy9_A 27 DATLDVGGLVFKAHWSVLACCS-HFFQRIYGDGT-------GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG--NRDQVL 96 (135)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHTCC-----------CCEEECGGGHHHHHHHHHHHHHSCCCCCTT--THHHHH
T ss_pred ceEEEECCEEEehHHHHHHHhC-HHHHHHHcCCC-------CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHH--HHHHHH
Confidence 3789999999999999998653 48999998642 344555 567999999999999999988764 355799
Q ss_pred HHHHhcCChhHHHhcccccc
Q psy15170 85 QEAIYYGLPAMIDSIFHSDD 104 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~~~ 104 (233)
.-|++|+++.|++.|++...
T Consensus 97 ~~A~~l~i~~L~~~C~~~l~ 116 (135)
T 2yy9_A 97 LAAKELRVPEAVELCQSFQP 116 (135)
T ss_dssp HHHHHTTCHHHHHHHHHCCC
T ss_pred HHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999976544
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.13 E-value=2.1e-06 Score=65.87 Aligned_cols=88 Identities=16% Similarity=0.290 Sum_probs=72.2
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||.++. .+.+-| |-++..|+.+|+|+-+|++.++.+ ....|+
T Consensus 26 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~-------~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~--~v~~ll 95 (119)
T 3b84_A 26 DATLDVGGLVFKAHWSVLACCS-HFFQSLYGDGS-------GGSVVLPAGFAEIFGLLLDFFYTGHLALTSG--NRDQVL 95 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTTT-------CCCEEECGGGHHHHHHHHHHHHHSCCCCCTT--THHHHH
T ss_pred ceEEEECCEEEEeeHHHHhhcC-HHHHHHHCCCC-------CCeEEeCCCCHHHHHHHHHHHcCCCCccCHH--HHHHHH
Confidence 3789999999999999998653 48999998642 344555 567999999999999999988765 355799
Q ss_pred HHHHhcCChhHHHhccccc
Q psy15170 85 QEAIYYGLPAMIDSIFHSD 103 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~~ 103 (233)
.-|++|+++.|.+.|++..
T Consensus 96 ~~A~~~~i~~L~~~C~~~l 114 (119)
T 3b84_A 96 LAARELRVPEAVELCQSFK 114 (119)
T ss_dssp HHHHHTTCHHHHHHHHHCC
T ss_pred HHHHHhCcHHHHHHHHHHH
Confidence 9999999999999987643
No 13
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.12 E-value=2.2e-06 Score=64.17 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=71.1
Q ss_pred eEEEEECC----eEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchH
Q psy15170 6 IVELNVGG----VFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREK 80 (233)
Q Consensus 6 ~V~LNVGG----~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~ 80 (233)
-|+|.||| +.|..-|..|.... .+|..||++.+.+ .. ..+-+ |-+|..|+.+|+|+-+|++.++.+ ..
T Consensus 10 Dv~l~v~~~~~~~~~~~Hk~iLa~~S-~~F~~~f~~~~~e---~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~--~~ 82 (109)
T 2vkp_A 10 DVHFVVGPPGATRTVPAHKYVLAVGS-SVFYAMFYGDLAE---VK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD--TV 82 (109)
T ss_dssp CEEEEESSTTSCEEEEECHHHHHHHC-HHHHHHHC---------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT--TH
T ss_pred cEEEEECCCCCcEEEEeeHHHHHHcC-HHHHHHhcCCccc---CC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH--HH
Confidence 38899999 99999999998653 4999999875321 12 66777 679999999999999999988764 34
Q ss_pred HHHHHHHHhcCChhHHHhcccc
Q psy15170 81 ERLRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 81 ~~L~~EA~fy~L~~Li~~l~~~ 102 (233)
..++.-|++|+++.|.+.|.+.
T Consensus 83 ~~ll~~A~~~~~~~L~~~c~~~ 104 (109)
T 2vkp_A 83 LATLYAAKKYIVPALAKACVNF 104 (109)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHH
Confidence 5799999999999999988653
No 14
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.07 E-value=2.3e-06 Score=65.35 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=71.0
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||++.+. ......+-+ |-++..|+.+|+|+.+|++.++.+ ....++
T Consensus 27 Dv~l~v~~~~~~aHk~vLaa~S-~~F~~~f~~~~~---e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~--~~~~ll 100 (120)
T 2if5_A 27 DVVILVEGREFPTHRSVLAACS-QYFKKLFTSGAV---VDQQNVYEIDFVSAEALTALMDFAYTATLTVSTA--NVGDIL 100 (120)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHC--------CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGG--GHHHHH
T ss_pred CeEEEECCEEEeHHHHHHHHhC-HHHHHHhcCCcc---ccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHH--HHHHHH
Confidence 3889999999999999998653 489999987532 223445555 468999999999999999987654 456799
Q ss_pred HHHHhcCChhHHHhccc
Q psy15170 85 QEAIYYGLPAMIDSIFH 101 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~ 101 (233)
.-|++|+++.|++.|++
T Consensus 101 ~~A~~~~i~~L~~~C~~ 117 (120)
T 2if5_A 101 SAARLLEIPAVSHVCAD 117 (120)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHH
Confidence 99999999999998865
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.06 E-value=2.3e-06 Score=65.92 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=71.8
Q ss_pred EEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-c-CCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 7 VELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-D-RDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 7 V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-D-RDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
|+|.|||+.|..-|..|.... .+|..||.+.+. +...+-+ | -++..|+.+|+|+-+|++.++.+ ....|+
T Consensus 35 v~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~~-----e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~--~v~~ll 106 (125)
T 3ohu_A 35 VTLIVERKEFRAHRAVLAACS-EYFWQALVGQTK-----NDLVVSLPEEVTARGFGPLLQFAYTAKLLLSRE--NIREVI 106 (125)
T ss_dssp EEEEETTEEEEECHHHHHHHB-HHHHHHHTTCCC-----SSCEEECCTTCCHHHHHHHHHHHTTSEEEECTT--THHHHH
T ss_pred eEEEECCEEEechHHHHHHcC-HHHHHHhcCCCC-----CCcEEEeCCCCCHHHHHHHHHhHcCCceEECHH--HHHHHH
Confidence 788899999999999998763 489999987532 2455666 3 68999999999999999988765 355799
Q ss_pred HHHHhcCChhHHHhccc
Q psy15170 85 QEAIYYGLPAMIDSIFH 101 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~ 101 (233)
.-|++|+++.|.+.|++
T Consensus 107 ~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 107 RCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp HHHHHHTBSSCTTSSCC
T ss_pred HHHHHhCCHHHHHHHHH
Confidence 99999999999888864
No 16
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.05 E-value=2.4e-06 Score=68.02 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=73.0
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||.+.... .......+-| |-++..|+.+|+|+.+|++.++.+ ....|+
T Consensus 49 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~~e-~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~--~v~~ll 124 (144)
T 2ppi_A 49 DAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPK-DDGSTYKIELEGISVMVMREILDYIFSGQIRLNED--TIQDVV 124 (144)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHHCC------CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTT--THHHHH
T ss_pred ceEEEECCEEEehHHHHHHHcC-HHHHHHHcCCCcc-ccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHH--HHHHHH
Confidence 3789999999999999998653 4999999864221 1123456666 568999999999999999987764 356799
Q ss_pred HHHHhcCChhHHHhcccc
Q psy15170 85 QEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~ 102 (233)
.-|++|+++.|++.|++.
T Consensus 125 ~~A~~l~i~~L~~~C~~~ 142 (144)
T 2ppi_A 125 QAADLLLLTDLKTLCCEF 142 (144)
T ss_dssp HHHHHTTCHHHHHHHHTT
T ss_pred HHHHHhCcHHHHHHHHHH
Confidence 999999999999998753
No 17
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.05 E-value=1.2e-06 Score=68.11 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=70.2
Q ss_pred EEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE--cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 7 VELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI--DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 7 V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI--DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
|+|.|||+.|..-|..|.... .+|..||.+. ....+.| |-++..|+.+|+|+.+|++.++.+ ....|+
T Consensus 36 v~l~v~~~~~~~Hk~vLaa~S-~~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~--~~~~ll 105 (129)
T 3ga1_A 36 VSVVVKGHAFKAHRAVLAASS-SYFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVG--DQDLLM 105 (129)
T ss_dssp EEEEETTEEEEECHHHHHHHB-HHHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTT--THHHHH
T ss_pred eEEEECCEEEEehHHHHHHcC-HHHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCCccccCHH--HHHHHH
Confidence 789999999999999998763 4899999853 4566777 578999999999999999988765 355799
Q ss_pred HHHHhcCChhHHHhcccc
Q psy15170 85 QEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~ 102 (233)
.-|++|+++.|.+.|++.
T Consensus 106 ~~A~~~~i~~l~~~C~~~ 123 (129)
T 3ga1_A 106 YTAGFLQIQEIMEKGTEF 123 (129)
T ss_dssp HHHHHTTBTTSSCC----
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 999999999998888654
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.96 E-value=2.7e-06 Score=65.70 Aligned_cols=89 Identities=12% Similarity=0.136 Sum_probs=71.3
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE--cCCCCchHHHhhhhccceecCCCCcchHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI--DRDGVLFRYVLDYLRNQMLILPESFREKERL 83 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI--DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L 83 (233)
-|+|.|||+.|..-|..|.... .+|..||.+... +...+-+ |-++..|+.+|+|+-+|++.++.+ ....|
T Consensus 31 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~mf~~~~~-----e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~--~v~~l 102 (124)
T 2ihc_A 31 DVTIFVEGQRFRAHRSVLAACS-SYFHSRIVGQAD-----GELNITLPEEVTVKGFEPLIQFAYTAKLILSKE--NVDEV 102 (124)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHTTC--------CEEEECCTTSCHHHHHHHHHHHHHSEEEEETT--THHHH
T ss_pred CEEEEECCEEEecHHHHHHHcC-HHHHHHHcCCCC-----CCceEeecCCcCHHHHHHHHHHhcCCCcccCHH--HHHHH
Confidence 3789999999999999998653 499999987521 2345555 568899999999999999987654 34579
Q ss_pred HHHHHhcCChhHHHhcccc
Q psy15170 84 RQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 84 ~~EA~fy~L~~Li~~l~~~ 102 (233)
+.-|++|+++.|++.|++.
T Consensus 103 l~~A~~~~~~~L~~~C~~~ 121 (124)
T 2ihc_A 103 CKCVEFLSVHNIEESCFQF 121 (124)
T ss_dssp HHHHHHHTBSSCCGGGGGT
T ss_pred HHHHHHHCCHHHHHHHHHH
Confidence 9999999999999888754
No 19
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.95 E-value=6.2e-06 Score=64.81 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=73.3
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE--cCCCCchHHHhhhhccceecCCCCcchHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI--DRDGVLFRYVLDYLRNQMLILPESFREKERL 83 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI--DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L 83 (233)
-|+|.|||+.|..-|..|.... .+|..||.+.+. +...+-+ +-++..|+.||+|+-+|++.++.+ ....|
T Consensus 38 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~~-----e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~--~v~~l 109 (138)
T 2z8h_A 38 DVTVLVEGQRFRAHRSVLAACS-SYFHSRIVGQTD-----AELTVTLPEEVTVKGFEPLIQFAYTAKLILSKD--NVDEV 109 (138)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTCCC-----TTEEEECCTTSCHHHHHHHHHHHHHSCCCCCTT--THHHH
T ss_pred CeEEEECCEEEechHHHHHHcC-HHHHHHHhcCCC-----CCceEEeCCCCCHHHHHHHHHHhcCCCcccCHH--HHHHH
Confidence 3789999999999999997653 499999987532 2345555 468899999999999999988765 35579
Q ss_pred HHHHHhcCChhHHHhcccccc
Q psy15170 84 RQEAIYYGLPAMIDSIFHSDD 104 (233)
Q Consensus 84 ~~EA~fy~L~~Li~~l~~~~~ 104 (233)
+.-|++|+++.|++.|.+...
T Consensus 110 l~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 110 CRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp HHHHHHHTCGGGHHHHHHHTT
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999876543
No 20
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.94 E-value=6.4e-06 Score=63.21 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=70.4
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||.++ ..++-| |-++..|+.+|+|+-+|++.++.+ ....++
T Consensus 30 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~--------~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~--~~~~ll 98 (121)
T 1buo_A 30 DVVIMVDSQEFHAHRTVLACTS-KMFEILFHRN--------SQHYTLDFLSPKTFQQILEYAYTATLQAKAE--DLDDLL 98 (121)
T ss_dssp CEEEEESSCEEEECHHHHHHHC-HHHHHHTTSC--------CSEEEECSSCHHHHHHHHHHHHHSCCCCCGG--GHHHHH
T ss_pred CEEEEECCEEEehhHHHHhhcC-HHHHHHHcCC--------CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHH--HHHHHH
Confidence 3789999999999999997653 4999999853 234444 468999999999999999987754 456799
Q ss_pred HHHHhcCChhHHHhcccc
Q psy15170 85 QEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~ 102 (233)
.-|++|+++.|.+.|++.
T Consensus 99 ~~A~~~~i~~L~~~c~~~ 116 (121)
T 1buo_A 99 YAAEILEIEYLEEQCLKM 116 (121)
T ss_dssp HHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHH
Confidence 999999999999988653
No 21
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.91 E-value=5.6e-06 Score=66.42 Aligned_cols=92 Identities=13% Similarity=0.121 Sum_probs=74.2
Q ss_pred EEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHHH
Q psy15170 7 VELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLRQ 85 (233)
Q Consensus 7 V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~~ 85 (233)
|+|.|||+.|..-|..|.... .+|..||.+.+ .......+-| |-++..|+.+|+|+.+|++.++.+ ....++.
T Consensus 37 v~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~~---~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~--~~~~ll~ 110 (172)
T 3htm_A 37 CCLCVAGQEFQAHKAILAARS-PVFSAMFEHEM---EESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK--MADDLLA 110 (172)
T ss_dssp EEEEETTEEEEECHHHHHHHC-HHHHHHHHSCC---CGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGG--THHHHHH
T ss_pred eEEEECCEEEEeeHHHHHHcC-HHHHHHHccCc---cccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHH--HHHHHHH
Confidence 889999999999999997653 49999998653 2233456666 679999999999999999977654 3457999
Q ss_pred HHHhcCChhHHHhcccccc
Q psy15170 86 EAIYYGLPAMIDSIFHSDD 104 (233)
Q Consensus 86 EA~fy~L~~Li~~l~~~~~ 104 (233)
-|++|+++.|.+.|++...
T Consensus 111 ~A~~~~~~~l~~~c~~~l~ 129 (172)
T 3htm_A 111 AADKYALERLKVMCEDALC 129 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHH
Confidence 9999999999998876543
No 22
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.91 E-value=4.7e-06 Score=63.89 Aligned_cols=86 Identities=14% Similarity=0.228 Sum_probs=69.0
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEEc-CCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFID-RDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFID-RDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||++.. ..+-++ -++..|+.+|+|+-+|++.++.+ ....|+
T Consensus 29 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~~~--------~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~--~~~~ll 97 (119)
T 2q81_A 29 DCTFVVDGVHFKAHKAVLAACS-EYFKMLFVDQK--------DVVHLDISNAAGLGQVLEFMYTAKLSLSPE--NVDDVL 97 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHHCC--------SGGGGGGCCHHHHHHHHHHHHHSCCCCCTT--THHHHH
T ss_pred ceEEEECCEEEehhHHHHHHcC-HHHHHHHcCCC--------CEEEeCCCCHHHHHHHHHHHcCCCCccCHH--HHHHHH
Confidence 3789999999999999998653 48999998631 122232 37899999999999999988765 355799
Q ss_pred HHHHhcCChhHHHhcccc
Q psy15170 85 QEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~ 102 (233)
.-|++|+++.|++.|++.
T Consensus 98 ~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 98 AVATFLQMQDIITACHAL 115 (119)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 999999999999988653
No 23
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.84 E-value=4e-06 Score=65.46 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=73.1
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||++.+ .....+.+-+ |-++..|+.+|+|+.+|++.++.+ ....++
T Consensus 27 Dv~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~~---~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~--~~~~ll 100 (145)
T 4eoz_A 27 DCCLCVAGQEFQAHKAILAARS-PVFSAMFEHEM---EESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK--MADDLL 100 (145)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHSSS---HHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGG--THHHHH
T ss_pred ceEEEECCEEEEeehHHHHHcC-HHHHHHHcCCC---cCCCCceEEecCCCHHHHHHHHHhhccCccCCcHH--HHHHHH
Confidence 3789999999999999997653 49999998642 1122345555 679999999999999999976654 345799
Q ss_pred HHHHhcCChhHHHhcccccc
Q psy15170 85 QEAIYYGLPAMIDSIFHSDD 104 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~~~ 104 (233)
.-|++|+++.|.+.|++...
T Consensus 101 ~~A~~~~~~~l~~~c~~~l~ 120 (145)
T 4eoz_A 101 AAADKYALERLKVMCEDALC 120 (145)
T ss_dssp HHHHHTTCHHHHHHHHCC--
T ss_pred HHHHHhCHHHHHHHHHHHHH
Confidence 99999999999999987544
No 24
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.69 E-value=2.3e-05 Score=67.21 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=70.0
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|+|.|||+.|..-|..|.... .+|..||.+.... .......+-| |-++..|+.||+|+.+|++.++.+ ....++
T Consensus 33 Dv~l~v~~~~f~~Hr~vLaa~S-~yF~~mf~~~~~~-~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~--~v~~ll 108 (256)
T 3hve_A 33 DAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPK-DDGSTYKIELEGISVMVMREILDYIFSGQIRLNED--TIQDVV 108 (256)
T ss_dssp CEEEEETTEEEEECHHHHHTTC-HHHHHTC------------CEEECSSCCHHHHHHHHHHHHHSCCCCC-C--CHHHHH
T ss_pred ceEEEECCEEEechHHHHHHcC-HHHHHHhCCCCCc-ccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHh--HHHHHH
Confidence 3889999999999999998763 4999999865211 1223455666 579999999999999999987765 355799
Q ss_pred HHHHhcCChhHHHhccccc
Q psy15170 85 QEAIYYGLPAMIDSIFHSD 103 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~~ 103 (233)
.-|.+|+++.|++.|.+..
T Consensus 109 ~~A~~l~i~~l~~~c~~~L 127 (256)
T 3hve_A 109 QAADLLLLTDLKTLCCEFL 127 (256)
T ss_dssp HHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHChHHHHHHHHHHH
Confidence 9999999999998887643
No 25
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.63 E-value=4.2e-05 Score=66.53 Aligned_cols=91 Identities=12% Similarity=0.099 Sum_probs=70.0
Q ss_pred EEEEEC---CeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-------cCCCCchHHHhhhhccceecCCCC
Q psy15170 7 VELNVG---GVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-------DRDGVLFRYVLDYLRNQMLILPES 76 (233)
Q Consensus 7 V~LNVG---G~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-------DRDp~~F~~ILnyLR~g~l~lP~~ 76 (233)
|+|.|| |+.|..-|..|.... .+|..||.++.. ....+.+-| |-++..|..+|+|+.+|++.++.+
T Consensus 35 v~l~v~~~~~~~f~~Hr~vLaa~S-~yF~~mf~~~~~---e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~ 110 (279)
T 3i3n_A 35 ITLCFGGAGGREFRAHRSVLAAAT-EYFTPLLSGQFS---ESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTG 110 (279)
T ss_dssp EEEECC----CEEEECHHHHHHHC-TTSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETT
T ss_pred eEEEEcCCCCeEEehHHHHHHHcC-HHHHHHhcCCCc---cccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHH
Confidence 889999 999999999998653 499999987532 233456766 678999999999999999987665
Q ss_pred cchHHHHHHHHHhcCChhHHHhccccc
Q psy15170 77 FREKERLRQEAIYYGLPAMIDSIFHSD 103 (233)
Q Consensus 77 ~~e~~~L~~EA~fy~L~~Li~~l~~~~ 103 (233)
. ...++.-|.+|+++.|.+.|.+..
T Consensus 111 ~--v~~ll~~A~~l~i~~L~~~c~~~L 135 (279)
T 3i3n_A 111 S--VHEVLELADRFLLIRLKEFCGEFL 135 (279)
T ss_dssp T--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHCcHHHHHHHHHHH
Confidence 3 457999999999999998887643
No 26
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.59 E-value=4.9e-05 Score=58.15 Aligned_cols=80 Identities=13% Similarity=0.164 Sum_probs=65.6
Q ss_pred EEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhcccee-cCCCCcchHHHHH
Q psy15170 7 VELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQML-ILPESFREKERLR 84 (233)
Q Consensus 7 V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l-~lP~~~~e~~~L~ 84 (233)
|.|.|||+.|..-|..|.... .+|..||.+. ...+-+ |-+|..|+.+|+|+-+|++ .++.+ ....++
T Consensus 34 v~l~v~~~~f~aHk~vLaa~S-~~F~~~f~~~--------~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~--~~~~ll 102 (116)
T 3fkc_A 34 VTVIVEDRKFRAHKNILSASS-TYFHQLFSVA--------GQVVELSFIRAEIFAEILNYIYSSKIVRVRSD--LLDELI 102 (116)
T ss_dssp EEEEETTEEEEECHHHHHHHC-HHHHHHTTSC--------CSEEEECSSCHHHHHHHHHHHTTSCCCSCCHH--HHHHHH
T ss_pred EEEEECCEEEehhHHHHHHcC-HHHHHHHcCC--------CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHH--HHHHHH
Confidence 788899999999999997653 4899999863 345555 5789999999999999998 45543 456799
Q ss_pred HHHHhcCChhHHH
Q psy15170 85 QEAIYYGLPAMID 97 (233)
Q Consensus 85 ~EA~fy~L~~Li~ 97 (233)
.-|++|+++.|.+
T Consensus 103 ~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 103 KSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHTCHHHHT
T ss_pred HHHHHhCccccCc
Confidence 9999999998864
No 27
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.53 E-value=0.00011 Score=56.80 Aligned_cols=81 Identities=12% Similarity=0.178 Sum_probs=64.4
Q ss_pred EEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHHH
Q psy15170 7 VELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLRQ 85 (233)
Q Consensus 7 V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~~ 85 (233)
|+|.|||+.|..-|..|....+ +|... ...+-| |-++..|+.+|+|+-+|++.++.+ ....|+.
T Consensus 33 v~l~v~~~~f~aHk~vLaa~S~-yF~~~------------~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~--~v~~ll~ 97 (119)
T 3m5b_A 33 TLITVGSQEFPAHSLVLAGVSQ-QLGRR------------GQWALGEGISPSTFAQLLNFVYGESVELQPG--ELRPLQE 97 (119)
T ss_dssp EEEEETTEEEEECHHHHHTTCG-GGCCC------------EEEECCSSCCHHHHHHHHHHHTTCCEEECGG--GHHHHHH
T ss_pred eEEEECCEEEeeEHHHHHHcCH-HHhcC------------CCEEEeCCCCHHHHHHHHHHHcCCCcCcCHH--HHHHHHH
Confidence 7899999999999999987643 44421 122233 468999999999999999988664 3567999
Q ss_pred HHHhcCChhHHHhcccc
Q psy15170 86 EAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 86 EA~fy~L~~Li~~l~~~ 102 (233)
-|++|+++.|++.|++.
T Consensus 98 aA~~l~i~~l~~~C~~~ 114 (119)
T 3m5b_A 98 AARALGVQSLEEACWRA 114 (119)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHH
Confidence 99999999999999765
No 28
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.40 E-value=8.4e-05 Score=65.40 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=73.2
Q ss_pred eEEEEECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceecCCCCcchHHHHH
Q psy15170 6 IVELNVGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLILPESFREKERLR 84 (233)
Q Consensus 6 ~V~LNVGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~lP~~~~e~~~L~ 84 (233)
-|.|.|||+.|...+..|.... .+|..||.+.. ......++-| |-+|..|+.+|+|+-+|.+.++. .....|+
T Consensus 176 Dv~l~v~~~~f~~Hk~vLaa~S-~~F~~~f~~~~---~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~--~~~~~ll 249 (312)
T 3hqi_A 176 DCCLCVAGQEFQAHKAILAARS-PVFSAMFEHEM---EESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD--KMADDLL 249 (312)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHTTC--------CCSEEEECSSCHHHHHHHHHHHHHSCCTTHH--HHHHHHH
T ss_pred ceEEEECCEEEeHHHHHHHHcC-HHHHHHhccCc---cccCCceEEecCCCHHHHHHHHHhhcCCCCCChH--HHHHHHH
Confidence 4889999999999999997653 48999998742 2234456666 67999999999999999987654 3456799
Q ss_pred HHHHhcCChhHHHhcccccc
Q psy15170 85 QEAIYYGLPAMIDSIFHSDD 104 (233)
Q Consensus 85 ~EA~fy~L~~Li~~l~~~~~ 104 (233)
.-|++|+++.|.+.|++...
T Consensus 250 ~~A~~~~~~~l~~~c~~~l~ 269 (312)
T 3hqi_A 250 AAADKYALERLKVMCEDALC 269 (312)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHH
Confidence 99999999999998876543
No 29
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=92.65 E-value=0.081 Score=42.50 Aligned_cols=90 Identities=10% Similarity=0.223 Sum_probs=63.6
Q ss_pred EEEEE-CCeEEEecHHhhccCCCCccccccCCCCCCCC-cCCCccEEE-cCCCCchHHHhhhhccce-------------
Q psy15170 7 VELNV-GGVFYTTSLSTITRDPSSHIARLFSNPENSPQ-KDAKGKYFI-DRDGVLFRYVLDYLRNQM------------- 70 (233)
Q Consensus 7 V~LNV-GG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~-~d~~g~yFI-DRDp~~F~~ILnyLR~g~------------- 70 (233)
|+|.. +|+.|.+.+.....- .+|..||.+. ... ....+.+-+ +-++...+.|++|+.+++
T Consensus 3 v~L~ssDg~~f~v~~~vA~~S--~~i~~m~~~~--~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEIAKQS--VTIKTMLEDL--GMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHHHHTC--HHHHHHTTSS--CSS------CEECTTSCHHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHHHHHh--HHHHHHHHhc--CCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 77764 799999999984433 4889999751 111 123355666 679999999999999977
Q ss_pred -------------ecCCCCcchHHHHHHHHHhcCChhHHHhcccc
Q psy15170 71 -------------LILPESFREKERLRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 71 -------------l~lP~~~~e~~~L~~EA~fy~L~~Li~~l~~~ 102 (233)
+.++ ...+-.|+..|.|.+|.+|++.+.+.
T Consensus 79 ~~~~~i~~wD~~F~~id--~~~l~eLl~AAnyL~I~~Lld~~c~~ 121 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVTCKT 121 (159)
T ss_dssp --CCCCCHHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHcCC--HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2222 22356799999999999999988754
No 30
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=83.90 E-value=0.32 Score=38.27 Aligned_cols=87 Identities=11% Similarity=0.195 Sum_probs=61.8
Q ss_pred EEEEE-CCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccceec------------
Q psy15170 7 VELNV-GGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLI------------ 72 (233)
Q Consensus 7 V~LNV-GG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~------------ 72 (233)
|+|-- .|+.|.+.+.... . ..++..|+.+. . ++.+-+ +-++...+.|++|+...+-.
T Consensus 4 v~L~SsDg~~f~v~~~vA~-~-S~~ik~ml~~~--~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 74 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEIAK-Q-SVTIKTMLEDL--G-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 74 (141)
T ss_dssp EEEECTTSCEEEEEGGGGG-T-CHHHHHHHHHT--C-----CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------
T ss_pred EEEEeCCCCEEEecHHHHH-H-hHHHHHHHHhc--C-----CCceecCCcCHHHHHHHHHHHHHhccCCCcccccccccc
Confidence 66666 8999999999744 3 24788888642 1 344555 67899999999999886511
Q ss_pred ------------CCCCcchHHHHHHHHHhcCChhHHHhcccc
Q psy15170 73 ------------LPESFREKERLRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 73 ------------lP~~~~e~~~L~~EA~fy~L~~Li~~l~~~ 102 (233)
+.-+...+-.|+..|.|.+|.+|++.+.+.
T Consensus 75 ~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~ 116 (141)
T 1fs1_B 75 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 116 (141)
T ss_dssp ------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 111122355688999999999999888654
No 31
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=79.78 E-value=0.41 Score=38.45 Aligned_cols=88 Identities=11% Similarity=0.186 Sum_probs=39.4
Q ss_pred CeEEEEE-CCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhcccee-----------
Q psy15170 5 AIVELNV-GGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQML----------- 71 (233)
Q Consensus 5 ~~V~LNV-GG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l----------- 71 (233)
..|+|-- .|+.|.+.+.....- .++..|+.+.. .++.+=+ +-++.+.+.|+.|+...+-
T Consensus 4 ~~v~L~SsDg~~f~v~~~vA~~S--~~ik~ml~~~~------~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~ 75 (160)
T 2p1m_A 4 KKIVLKSSDGESFEVEEAVALES--QTIAHMVEDDC------VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEG 75 (160)
T ss_dssp ----CCC---------CHHHHTC--TTTC------------------CCTTSCHHHHHHHHHC-----------------
T ss_pred CEEEEEcCCCCEEEECHHHHHHh--HHHHHHHHccC------CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccc
Confidence 4577775 799999999985443 37888887421 1223433 5689999999999988652
Q ss_pred ----------------cCCCCcchHHHHHHHHHhcCChhHHHhcccc
Q psy15170 72 ----------------ILPESFREKERLRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 72 ----------------~lP~~~~e~~~L~~EA~fy~L~~Li~~l~~~ 102 (233)
.++.+ .+-.|+..|.|.+|.+|++.+.+.
T Consensus 76 ~~~~~~~i~~wD~~Fl~vd~~--~l~eLi~AAnyL~I~~Lldl~c~~ 120 (160)
T 2p1m_A 76 AATSDDDLKAWDADFMKIDQA--TLFELILAANYLNIKNLLDLTCQT 120 (160)
T ss_dssp ---------------------------CHHHHHHTTCHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHcCCHH--HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 12111 244688899999999999888654
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=70.49 E-value=3.3 Score=30.12 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=51.7
Q ss_pred EEEE-ECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhc-----c---ceec---C
Q psy15170 7 VELN-VGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLR-----N---QMLI---L 73 (233)
Q Consensus 7 V~LN-VGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR-----~---g~l~---l 73 (233)
|+|- .+|+.|.+.+.. .+.. .+|..||.+.. ......++.+-+ +-++...+.|++|+. . +.++ +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S-~~ik~m~~~~~-~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTS-GTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTS-HHHHHHHCCC---------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHh-HHHHHHHHhCC-CccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 4444 379999999998 4442 37888987521 111223566666 579999999999998 3 4554 4
Q ss_pred CCCcchHHHHHHHHHhcC
Q psy15170 74 PESFREKERLRQEAIYYG 91 (233)
Q Consensus 74 P~~~~e~~~L~~EA~fy~ 91 (233)
+.+ .+-.|+..|.|.+
T Consensus 81 ~~~--~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 81 APE--IALELLMAANFLD 96 (97)
T ss_dssp CGG--GHHHHHHHHHHHT
T ss_pred CHH--HHHHHHHHHhhhC
Confidence 443 3456888888875
No 33
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=65.31 E-value=4.4 Score=32.74 Aligned_cols=99 Identities=12% Similarity=0.149 Sum_probs=61.7
Q ss_pred CCCCCeEEEE-ECCeEEEecHHhhccCCCCccccccCCCCC-CCCcCCCccEEE-cCCCCchHHHhhhhccceec-CCC-
Q psy15170 1 MEYPAIVELN-VGGVFYTTSLSTITRDPSSHIARLFSNPEN-SPQKDAKGKYFI-DRDGVLFRYVLDYLRNQMLI-LPE- 75 (233)
Q Consensus 1 m~~~~~V~LN-VGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~-~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~l~-lP~- 75 (233)
|+. ..|+|- =.|+.|.+.+.....- ..+..|+.+... ....+..+.+=+ +-++.+.+.|+.|+...+-. .|.
T Consensus 4 m~~-~~i~L~SsDG~~F~V~~~vA~~S--~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 4 MVT-SNVVLVSGEGERFTVDKKIAERS--LLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp --C-CEEEEECTTCCEEEEEHHHHTTS--HHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCC-CeEEEEeCCCCEEEecHHHHHHh--HHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccc
Confidence 554 445554 4599999999986653 377788764211 001122356656 67999999999999875421 111
Q ss_pred ---------Cc------------chHHHHHHHHHhcCChhHHHhcccc
Q psy15170 76 ---------SF------------REKERLRQEAIYYGLPAMIDSIFHS 102 (233)
Q Consensus 76 ---------~~------------~e~~~L~~EA~fy~L~~Li~~l~~~ 102 (233)
.+ ..+-.|+..|.|.+|.+|++.+.+.
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~ 128 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKV 128 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 1244688899999999999887654
No 34
>4acj_A WU\:FB25H12 protein,; immune system; 0.97A {Danio rerio}
Probab=53.38 E-value=6.9 Score=31.46 Aligned_cols=46 Identities=13% Similarity=0.234 Sum_probs=35.0
Q ss_pred EEEeeecccccccCCchhhhhce------eeeEEEEeeeecccccccccccCCCCCCC
Q psy15170 112 ITIGYRGSFAFGRDGLADVKFRK------ITRILVCGRVTLCRDVFGETLNESRDPDH 163 (233)
Q Consensus 112 i~i~yr~~~~~~rd~~~~~~f~~------~~ri~v~~~~~l~~~vFg~~~n~s~d~~~ 163 (233)
.++.|++ .++|..-..|++ .+.|+|+. ...+.|||.++++.|.++.
T Consensus 29 w~LlYss----~~hG~S~~~~~~~~~~~~~ptllvik--~~~g~vFGaf~s~~w~~~~ 80 (167)
T 4acj_A 29 WNLAFST----SKHGMSIKTLYRAMQDQDSPMLLVIK--DSDGQIFGALASEPFKVSE 80 (167)
T ss_dssp CEEEEEH----HHHCSCHHHHHHHHTTCCSCEEEEEE--ETTSCEEEEEESSCCCCCS
T ss_pred CeEEEEe----ccCCccHHHHHHHhcCCCCCEEEEEE--cCCceEEEEEeCCcccccC
Confidence 5788887 478887766643 47888884 4568999999999998764
No 35
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=34.15 E-value=47 Score=24.08 Aligned_cols=61 Identities=18% Similarity=0.313 Sum_probs=44.5
Q ss_pred CCeEEEEE-CCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccce
Q psy15170 4 PAIVELNV-GGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQM 70 (233)
Q Consensus 4 ~~~V~LNV-GG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~ 70 (233)
+..|+|-- .|+.|.+.+.....- ..+..|+.++ ..+.++.+=+ +-++...+.|++|+...+
T Consensus 3 ~~~v~L~SsDg~~f~V~~~vA~~S--~~ik~ml~~~----~e~~~~~Iplp~V~~~iL~kVieyc~~h~ 65 (99)
T 1hv2_A 3 QDFVTLVSKDDKEYEISRSAAMIS--PTLKAMIEGP----FRESKGRIELKQFDSHILEKAVEYLNYNL 65 (99)
T ss_dssp CSEEEEEETTTEEEEEEHHHHTTC--HHHHHHHHSS----TTTCTTEEEETTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCEEEECHHHHHHh--HHHHHHHhcc----cccCCCceecCCcCHHHHHHHHHHHHHhc
Confidence 35677777 999999999975443 3778888752 1233456666 679999999999998754
No 36
>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens}
Probab=28.84 E-value=94 Score=24.85 Aligned_cols=25 Identities=12% Similarity=0.332 Sum_probs=21.2
Q ss_pred CcchHHHHHHHHHhcCcEEEEecCC
Q psy15170 176 KHSSIEQAFDMLQEQGFHLVGSCGS 200 (233)
Q Consensus 176 k~~~leq~~~~l~~~gf~~~~~~~~ 200 (233)
++..++++++.|.+.||.+++....
T Consensus 85 ~~~~~~~~l~~lk~~g~~i~~~~~~ 109 (184)
T 2ha8_A 85 KPPQLIDYLQQKKTEGYTIIGVEQT 109 (184)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCCHHHHHHHHHHCCCEEEEEECC
Confidence 4567889999999999999988644
No 37
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=27.42 E-value=18 Score=26.53 Aligned_cols=23 Identities=22% Similarity=0.518 Sum_probs=18.7
Q ss_pred HHHHHHhcCcEEEEecCC-CCCCC
Q psy15170 183 AFDMLQEQGFHLVGSCGS-GTAGS 205 (233)
Q Consensus 183 ~~~~l~~~gf~~~~~~~~-g~~~~ 205 (233)
.++-+.++|..+-++|+| |+++.
T Consensus 28 lL~aa~~~gi~i~~~C~g~G~Cgt 51 (109)
T 2y5c_A 28 VLHLAQRHGVDLEGACEASLACST 51 (109)
T ss_dssp HHHHHHHTTCCCCCTTSSSSSCCT
T ss_pred HHHHHHHcCCCCCcCCCCCcCcCc
Confidence 366677899999999988 88764
No 38
>1t3u_A Conserved hypothetical protein; NYSGXRC, unknown ORF, COG3027, PSI, protein structure initiative; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.244.1.1 PDB: 1w2e_A
Probab=25.48 E-value=42 Score=24.43 Aligned_cols=19 Identities=11% Similarity=0.130 Sum_probs=12.6
Q ss_pred CCCCCeEEEEECCeEEEec
Q psy15170 1 MEYPAIVELNVGGVFYTTS 19 (233)
Q Consensus 1 m~~~~~V~LNVGG~~F~Tt 19 (233)
|+....|+++|.|+.|+..
T Consensus 1 Ms~~~~v~V~I~G~~Y~l~ 19 (104)
T 1t3u_A 1 MSQSNTLTVQILDKEYCIN 19 (104)
T ss_dssp -----CEEEEETTEEEEEC
T ss_pred CCCCCeEEEEECCEEEEee
Confidence 6665689999999999764
No 39
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=24.26 E-value=40 Score=24.34 Aligned_cols=20 Identities=30% Similarity=0.604 Sum_probs=17.0
Q ss_pred HHHHHHHhcCcEEEEecCCC
Q psy15170 182 QAFDMLQEQGFHLVGSCGSG 201 (233)
Q Consensus 182 q~~~~l~~~gf~~~~~~~~g 201 (233)
-++|+|-..||+++|..|=|
T Consensus 54 ~VLnKLE~~G~rVvsmtGvg 73 (83)
T 1jg5_A 54 IVLDKLECRGFRVLSMTGVG 73 (83)
T ss_dssp HHHHHHHHTTCEEEEEEEET
T ss_pred HHHHHHhccCeEEEEEecCC
Confidence 67999999999999986543
No 40
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=23.64 E-value=53 Score=25.17 Aligned_cols=25 Identities=24% Similarity=0.390 Sum_probs=19.7
Q ss_pred ccCcchHHHHHHHHHhcCcEEEEec
Q psy15170 174 FLKHSSIEQAFDMLQEQGFHLVGSC 198 (233)
Q Consensus 174 ~lk~~~leq~~~~l~~~gf~~~~~~ 198 (233)
|.||+.+..-..||..-||+-|...
T Consensus 62 yFkh~nfsSFvRQLN~YGF~Kv~~~ 86 (125)
T 2ldu_A 62 YFKHNNMASFVRQLNMYGFRKVVHI 86 (125)
T ss_dssp HSSCCCHHHHHHHHHHTTCEEEECS
T ss_pred hcCCCcHHHHHHHhcccCceEEeec
Confidence 3588877677788989999999763
No 41
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=23.12 E-value=67 Score=23.04 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=49.7
Q ss_pred eEEEEE-CCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccce-----------ec
Q psy15170 6 IVELNV-GGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQM-----------LI 72 (233)
Q Consensus 6 ~V~LNV-GG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~-----------l~ 72 (233)
.|+|-- .|+.|.+.+.....- ..+..|+.+.. ......++.+=+ +-++...+.|+.|+...+ ..
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~S--~~ik~ml~~~~-~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALTS--GTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTTS--HHHHHHHHCC---------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred eEEEEecCCCEEEeCHHHHHHh--HHHHHHHHccC-CcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 355655 899999999975443 37788887421 001122345655 568999999999997743 11
Q ss_pred CCCCcchHHHHHHHHHhcCC
Q psy15170 73 LPESFREKERLRQEAIYYGL 92 (233)
Q Consensus 73 lP~~~~e~~~L~~EA~fy~L 92 (233)
++.+ .+-.|+..|.|.+|
T Consensus 79 vd~~--~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPE--IALELLMAANFLDC 96 (96)
T ss_dssp CCTT--THHHHHHHHHHHTC
T ss_pred cCHH--HHHHHHHHHHHhCc
Confidence 2222 24457777777654
No 42
>1hh1_A Holliday junction resolving enzyme HJC; holliday junction resolvase, homologous recombination, nuclease domain, archaea; 2.15A {Sulfolobus solfataricus} SCOP: c.52.1.18
Probab=22.05 E-value=55 Score=25.75 Aligned_cols=25 Identities=32% Similarity=0.553 Sum_probs=18.3
Q ss_pred cchHH-HHHHHHHhcCcEEEEecCCC
Q psy15170 177 HSSIE-QAFDMLQEQGFHLVGSCGSG 201 (233)
Q Consensus 177 ~~~le-q~~~~l~~~gf~~~~~~~~g 201 (233)
...-| .|..-|.++||.++.+|++|
T Consensus 8 G~~~E~~a~~~L~~~G~~ilr~~~sg 33 (143)
T 1hh1_A 8 GSAVERNIVSRLRDKGFAVVRAPASG 33 (143)
T ss_dssp -CHHHHHHHHHHHHTTCEEEECCC--
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCcC
Confidence 34445 67888999999999988866
No 43
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=21.86 E-value=27 Score=25.58 Aligned_cols=23 Identities=9% Similarity=0.463 Sum_probs=18.7
Q ss_pred HHHHHHhcCcEEEEecCC-CCCCC
Q psy15170 183 AFDMLQEQGFHLVGSCGS-GTAGS 205 (233)
Q Consensus 183 ~~~~l~~~gf~~~~~~~~-g~~~~ 205 (233)
.+|-+.++|..+-++|+| |+++.
T Consensus 27 lL~aa~~~Gi~i~~~C~g~G~Cgt 50 (113)
T 3ah7_A 27 ILELAHDHHIEMESACGGVKACTT 50 (113)
T ss_dssp HHHHHHHTTCCCCCTTCSSSSCST
T ss_pred HHHHHHHcCCCCCcCCCCCCCcCC
Confidence 467778899999999985 88764
No 44
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.52 E-value=35 Score=25.13 Aligned_cols=13 Identities=23% Similarity=0.266 Sum_probs=11.1
Q ss_pred EEEEecCCCCCCC
Q psy15170 193 HLVGSCGSGTAGS 205 (233)
Q Consensus 193 ~~~~~~~~g~~~~ 205 (233)
+++.+||+|.++|
T Consensus 5 kIll~Cg~G~sTS 17 (106)
T 1e2b_A 5 HIYLFSSAGMSTS 17 (106)
T ss_dssp EEEEECSSSTTTH
T ss_pred EEEEECCCchhHH
Confidence 6889999999865
No 45
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=21.46 E-value=49 Score=24.67 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=41.7
Q ss_pred CCeEEEE-ECCeEEEecHHhhccCCCCccccccCCCCCCCCcCCCccEEE-cCCCCchHHHhhhhccce
Q psy15170 4 PAIVELN-VGGVFYTTSLSTITRDPSSHIARLFSNPENSPQKDAKGKYFI-DRDGVLFRYVLDYLRNQM 70 (233)
Q Consensus 4 ~~~V~LN-VGG~~F~Tt~sTL~~~P~S~L~~lfs~~~~~~~~d~~g~yFI-DRDp~~F~~ILnyLR~g~ 70 (233)
...|+|- -.|+.|.+.+.....- ..+..|+.+.. ......++.+=+ +-++.+.+.|+.|+...+
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S--~tIk~ml~~~~-~~~e~~~~~IplpnV~s~iL~kVieyc~~h~ 81 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTS--GTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFTYKV 81 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTS--HHHHHHSSCC---------CEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCEEEECHHHHHHh--HHHHHHHHhcC-CcccccCCceeCCCCCHHHHHHHHHHHHHhh
Confidence 4567777 7899999999976554 37788887421 001122345555 568999999999997743
No 46
>1zjr_A TRNA (guanosine-2'-O-)-methyltransferase; methylase, RNA modifying enzyme, topological knot; 1.85A {Aquifex aeolicus}
Probab=21.39 E-value=1.4e+02 Score=24.46 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=20.3
Q ss_pred cchHHHHHHHHHhcCcEEEEecC
Q psy15170 177 HSSIEQAFDMLQEQGFHLVGSCG 199 (233)
Q Consensus 177 ~~~leq~~~~l~~~gf~~~~~~~ 199 (233)
+..++++++.|.+.||.+++...
T Consensus 83 ~~~l~~~l~~l~~~g~~i~~~~~ 105 (211)
T 1zjr_A 83 VDNPVQKLLEFKNRGFQIVATWL 105 (211)
T ss_dssp CSCHHHHHHHHHHTTCEEEEEBC
T ss_pred cCCHHHHHHHHHHCCCEEEEEec
Confidence 56889999999999999998864
No 47
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=21.22 E-value=25 Score=25.47 Aligned_cols=23 Identities=13% Similarity=0.495 Sum_probs=18.6
Q ss_pred HHHHHHhcCcE-EEEecC-CCCCCC
Q psy15170 183 AFDMLQEQGFH-LVGSCG-SGTAGS 205 (233)
Q Consensus 183 ~~~~l~~~gf~-~~~~~~-~g~~~~ 205 (233)
.++-+.++|.. +-++|+ .|+++.
T Consensus 23 lL~aa~~~gi~~i~~~C~g~G~Cgt 47 (106)
T 1uwm_A 23 VMEAARDNGVPGIDADCGGACACST 47 (106)
T ss_dssp HHHHHHTTTCTTCCCTTSSSSSSCT
T ss_pred HHHHHHHcCCCCcccCCCCCCCcCc
Confidence 46778899999 999996 488764
Done!