Query psy15173
Match_columns 131
No_of_seqs 186 out of 468
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 22:25:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3umv_A Deoxyribodipyrimidine p 99.8 4.9E-20 1.7E-24 156.7 10.4 128 3-131 94-355 (506)
2 2xry_A Deoxyribodipyrimidine p 99.8 2.5E-19 8.5E-24 150.7 11.3 127 3-130 91-354 (482)
3 2j07_A Deoxyribodipyrimidine p 99.6 6.8E-15 2.3E-19 122.2 8.9 62 3-64 51-112 (420)
4 1dnp_A DNA photolyase; DNA rep 99.5 2.6E-14 8.9E-19 120.2 5.9 62 3-64 55-120 (471)
5 3fy4_A 6-4 photolyase; DNA rep 99.5 2.5E-14 8.5E-19 122.4 5.0 60 3-62 67-126 (537)
6 1u3d_A Cryptochrome 1 apoprote 99.4 2.5E-13 8.6E-18 115.0 6.5 60 3-62 64-124 (509)
7 1owl_A Photolyase, deoxyribodi 99.4 9.5E-13 3.3E-17 110.9 6.9 62 3-64 56-117 (484)
8 2wq7_A RE11660P; lyase-DNA com 99.3 3.8E-13 1.3E-17 114.8 3.7 58 3-60 88-145 (543)
9 3tvs_A Cryptochrome-1; circadi 99.3 1.1E-12 3.8E-17 112.2 3.8 60 3-62 60-122 (538)
10 2e0i_A 432AA long hypothetical 99.2 9E-12 3.1E-16 104.1 6.7 60 3-64 55-114 (440)
11 1np7_A DNA photolyase; protein 98.8 9.5E-09 3.2E-13 86.4 6.8 62 3-64 64-125 (489)
12 2j4d_A Cryptochrome 3, cryptoc 98.7 1.7E-08 5.8E-13 85.8 6.6 62 3-64 99-160 (525)
13 3zxs_A Cryptochrome B, rscryb; 96.2 0.0082 2.8E-07 51.2 6.4 45 3-47 66-117 (522)
14 1tq8_A Hypothetical protein RV 94.6 0.14 4.9E-06 35.7 7.4 47 4-50 81-130 (163)
15 2j4d_A Cryptochrome 3, cryptoc 93.9 0.018 6E-07 48.8 1.4 50 73-123 301-353 (525)
16 3hgm_A Universal stress protei 93.7 0.15 5E-06 34.1 5.6 46 4-49 70-120 (147)
17 1mjh_A Protein (ATP-binding do 92.3 0.28 9.6E-06 33.5 5.5 43 6-48 85-129 (162)
18 1np7_A DNA photolyase; protein 92.0 0.045 1.6E-06 45.7 1.2 41 73-114 265-307 (489)
19 3fdx_A Putative filament prote 91.8 0.42 1.4E-05 31.7 5.8 45 4-48 66-115 (143)
20 3rjz_A N-type ATP pyrophosphat 91.5 0.29 9.9E-06 37.6 5.2 60 6-65 52-116 (237)
21 3dlo_A Universal stress protei 91.5 0.35 1.2E-05 33.4 5.3 45 4-48 78-126 (155)
22 3s3t_A Nucleotide-binding prot 91.5 0.31 1.1E-05 32.5 4.9 45 4-48 69-117 (146)
23 3loq_A Universal stress protei 90.8 0.97 3.3E-05 33.9 7.5 45 4-48 214-260 (294)
24 2dum_A Hypothetical protein PH 90.4 0.42 1.4E-05 32.9 4.8 44 5-48 79-126 (170)
25 1jmv_A USPA, universal stress 90.3 0.57 2E-05 31.0 5.3 43 6-48 66-111 (141)
26 2gm3_A Unknown protein; AT3G01 89.9 0.63 2.2E-05 32.2 5.5 44 5-48 88-133 (175)
27 3fg9_A Protein of universal st 89.7 0.56 1.9E-05 31.8 4.9 45 4-48 79-128 (156)
28 3tnj_A Universal stress protei 89.5 0.85 2.9E-05 30.5 5.7 40 9-48 76-118 (150)
29 3idf_A USP-like protein; unive 89.1 0.81 2.8E-05 30.1 5.3 44 4-49 66-111 (138)
30 1q77_A Hypothetical protein AQ 88.6 0.86 2.9E-05 30.1 5.2 44 18-65 88-131 (138)
31 3fvv_A Uncharacterized protein 87.6 1.4 4.9E-05 31.2 6.2 44 3-46 94-137 (232)
32 2z08_A Universal stress protei 85.2 1.5 5.3E-05 28.8 4.9 34 16-49 73-109 (137)
33 3olq_A Universal stress protei 82.5 4 0.00014 30.6 6.8 56 6-61 230-289 (319)
34 3loq_A Universal stress protei 80.6 4.5 0.00015 30.2 6.4 60 4-65 86-154 (294)
35 3mt0_A Uncharacterized protein 80.0 3.2 0.00011 31.0 5.4 42 7-48 202-246 (290)
36 4fe3_A Cytosolic 5'-nucleotida 78.4 2.8 9.7E-05 31.6 4.7 45 3-47 143-191 (297)
37 1ul1_X Flap endonuclease-1; pr 78.2 2.9 0.0001 33.7 5.0 43 4-46 135-177 (379)
38 3q8k_A Flap endonuclease 1; he 77.6 3.4 0.00012 32.9 5.2 44 3-46 134-177 (341)
39 1a76_A Flap endonuclease-1 pro 76.7 3.7 0.00013 32.3 5.0 42 5-46 131-172 (326)
40 3mmz_A Putative HAD family hyd 76.6 7 0.00024 27.2 6.1 51 10-64 48-98 (176)
41 1b43_A Protein (FEN-1); nuclea 76.0 4 0.00014 32.3 5.1 43 4-46 130-172 (340)
42 3j08_A COPA, copper-exporting 75.3 5.1 0.00017 34.4 5.9 59 4-63 460-518 (645)
43 3ib6_A Uncharacterized protein 74.7 14 0.00049 25.5 7.3 46 3-48 36-88 (189)
44 1pq4_A Periplasmic binding pro 74.7 13 0.00043 28.6 7.6 47 2-48 222-269 (291)
45 2o1e_A YCDH; alpha-beta protei 74.3 4 0.00014 31.9 4.6 45 2-46 224-269 (312)
46 3ory_A Flap endonuclease 1; hy 73.7 4.8 0.00016 32.4 5.1 40 6-45 146-185 (363)
47 4gxt_A A conserved functionall 73.1 3.5 0.00012 33.3 4.1 38 3-40 223-260 (385)
48 2izo_A FEN1, flap structure-sp 72.9 5 0.00017 31.8 4.9 43 4-46 127-169 (346)
49 3l8h_A Putative haloacid dehal 72.8 12 0.00041 25.3 6.4 62 3-64 29-114 (179)
50 3ij5_A 3-deoxy-D-manno-octulos 72.2 8.6 0.00029 28.0 5.8 52 10-64 85-136 (211)
51 3e8m_A Acylneuraminate cytidyl 72.1 11 0.00038 25.2 6.1 52 10-64 40-91 (164)
52 3mn1_A Probable YRBI family ph 71.8 9.3 0.00032 26.8 5.8 53 9-64 54-106 (189)
53 3n07_A 3-deoxy-D-manno-octulos 71.4 11 0.00036 27.1 6.1 51 11-64 62-112 (195)
54 3j09_A COPA, copper-exporting 71.0 7.1 0.00024 33.9 5.9 58 4-62 538-595 (723)
55 2p9j_A Hypothetical protein AQ 69.8 13 0.00044 24.9 5.9 56 6-64 41-96 (162)
56 3gi1_A LBP, laminin-binding pr 69.5 9.1 0.00031 29.4 5.6 45 2-46 213-258 (286)
57 3cx3_A Lipoprotein; zinc-bindi 69.3 8.2 0.00028 29.5 5.3 45 2-46 211-256 (284)
58 3gkn_A Bacterioferritin comigr 69.1 9.8 0.00034 25.4 5.2 42 3-44 55-96 (163)
59 2wfc_A Peroxiredoxin 5, PRDX5; 68.6 13 0.00046 25.7 6.0 44 4-47 53-100 (167)
60 1tp9_A Peroxiredoxin, PRX D (t 68.3 15 0.00051 24.9 6.1 45 3-47 56-104 (162)
61 1k1e_A Deoxy-D-mannose-octulos 68.2 7.7 0.00026 26.9 4.6 54 8-64 42-95 (180)
62 3uma_A Hypothetical peroxiredo 67.8 12 0.00042 26.6 5.7 46 3-48 77-126 (184)
63 1rxw_A Flap structure-specific 67.0 9.3 0.00032 30.0 5.3 42 5-46 130-171 (336)
64 2xzm_U Ribosomal protein L7AE 66.9 17 0.00057 24.9 6.0 43 4-46 27-74 (126)
65 3mng_A Peroxiredoxin-5, mitoch 66.7 15 0.00053 25.8 6.0 44 4-47 65-112 (173)
66 3rfu_A Copper efflux ATPase; a 65.7 6.3 0.00022 34.6 4.4 58 4-62 557-614 (736)
67 2lbw_A H/ACA ribonucleoprotein 65.7 12 0.00043 25.1 5.1 43 4-46 23-70 (121)
68 3skx_A Copper-exporting P-type 65.7 13 0.00043 26.8 5.5 46 4-49 147-192 (280)
69 1l6r_A Hypothetical protein TA 65.4 12 0.0004 27.2 5.3 36 7-42 28-63 (227)
70 3a1c_A Probable copper-exporti 65.3 13 0.00045 27.7 5.7 46 4-49 166-211 (287)
71 3ixr_A Bacterioferritin comigr 65.1 9.7 0.00033 26.4 4.6 41 3-43 71-111 (179)
72 1nm3_A Protein HI0572; hybrid, 65.0 20 0.00067 26.0 6.5 45 3-47 54-101 (241)
73 3ujp_A Mn transporter subunit; 64.3 7.5 0.00026 30.4 4.2 41 2-42 224-265 (307)
74 3olq_A Universal stress protei 63.5 14 0.00047 27.6 5.5 61 5-65 74-142 (319)
75 4eze_A Haloacid dehalogenase-l 62.7 9.7 0.00033 29.5 4.6 45 3-47 181-225 (317)
76 3zxs_A Cryptochrome B, rscryb; 62.7 4.3 0.00015 34.5 2.7 29 85-113 306-335 (522)
77 3qe9_Y Exonuclease 1; exonucle 62.4 9.5 0.00032 30.5 4.6 40 6-45 130-169 (352)
78 2ale_A SNU13, NHP2/L7AE family 62.1 15 0.0005 25.4 5.0 43 4-46 35-82 (134)
79 3n1u_A Hydrolase, HAD superfam 61.8 21 0.00071 25.1 6.0 39 10-48 55-93 (191)
80 3mt0_A Uncharacterized protein 61.3 17 0.00057 26.9 5.6 48 3-50 50-100 (290)
81 4f82_A Thioredoxin reductase; 61.1 27 0.00093 25.0 6.5 45 3-47 68-116 (176)
82 3hh8_A Metal ABC transporter s 60.8 18 0.00062 27.8 5.8 42 2-43 217-259 (294)
83 3mfq_A TROA, high-affinity zin 60.7 11 0.00039 28.8 4.6 45 2-46 197-245 (282)
84 3m1y_A Phosphoserine phosphata 60.4 11 0.00036 26.0 4.1 43 3-45 77-119 (217)
85 2pr7_A Haloacid dehalogenase/e 59.9 7.6 0.00026 24.7 3.1 43 4-46 21-67 (137)
86 1nnl_A L-3-phosphoserine phosp 59.2 12 0.0004 26.2 4.2 39 3-41 88-126 (225)
87 2wm8_A MDP-1, magnesium-depend 59.1 11 0.00038 26.0 4.0 39 3-41 70-109 (187)
88 2r8e_A 3-deoxy-D-manno-octulos 58.7 26 0.00089 24.3 6.0 39 10-48 62-100 (188)
89 3p96_A Phosphoserine phosphata 58.7 13 0.00045 29.4 4.8 44 3-46 258-301 (415)
90 3drn_A Peroxiredoxin, bacterio 58.2 19 0.00065 24.1 5.0 43 3-45 49-91 (161)
91 3n28_A Phosphoserine phosphata 57.5 18 0.00061 27.5 5.3 58 4-61 47-128 (335)
92 2pwj_A Mitochondrial peroxired 56.9 30 0.001 23.8 6.0 44 4-47 65-112 (171)
93 3kd3_A Phosphoserine phosphohy 56.9 15 0.00052 24.8 4.4 39 3-41 84-122 (219)
94 2a4v_A Peroxiredoxin DOT5; yea 56.7 32 0.0011 22.8 6.0 41 3-44 55-95 (159)
95 3n28_A Phosphoserine phosphata 56.4 14 0.00049 28.1 4.6 44 3-46 180-223 (335)
96 2prs_A High-affinity zinc upta 56.2 14 0.00047 28.2 4.4 45 2-46 208-253 (284)
97 2iel_A Hypothetical protein TT 55.7 20 0.00067 25.3 4.7 64 4-70 58-130 (138)
98 2hsz_A Novel predicted phospha 54.1 30 0.001 24.6 5.8 44 4-47 117-164 (243)
99 3v7e_A Ribosome-associated pro 53.8 29 0.00099 21.6 5.0 43 4-46 14-60 (82)
100 1xvl_A Mn transporter, MNTC pr 53.6 24 0.00081 27.6 5.5 42 2-43 238-280 (321)
101 1l7m_A Phosphoserine phosphata 53.0 17 0.00058 24.5 4.1 41 4-44 79-119 (211)
102 2pib_A Phosphorylated carbohyd 52.0 24 0.00083 23.6 4.8 45 3-47 86-134 (216)
103 1xiy_A Peroxiredoxin, pfaop; a 51.9 37 0.0012 24.2 5.9 43 4-46 65-111 (182)
104 1n8j_A AHPC, alkyl hydroperoxi 51.9 29 0.00098 24.1 5.2 44 3-46 50-98 (186)
105 2oda_A Hypothetical protein ps 51.5 22 0.00076 25.1 4.6 62 3-65 38-101 (196)
106 2ah5_A COG0546: predicted phos 51.4 56 0.0019 22.4 7.1 61 4-65 87-151 (210)
107 3m9l_A Hydrolase, haloacid deh 50.9 25 0.00086 24.0 4.8 38 3-40 72-109 (205)
108 1xvi_A MPGP, YEDP, putative ma 50.8 19 0.00066 26.6 4.4 34 8-41 33-66 (275)
109 3ab8_A Putative uncharacterize 50.6 23 0.00078 25.7 4.7 59 5-65 75-141 (268)
110 3e58_A Putative beta-phosphogl 50.0 29 0.001 23.1 4.9 45 3-47 91-139 (214)
111 2yj3_A Copper-transporting ATP 55.2 3.5 0.00012 30.8 0.0 46 4-49 139-184 (263)
112 1xbi_A 50S ribosomal protein L 49.5 42 0.0014 22.4 5.6 43 4-46 32-79 (120)
113 2nyv_A Pgpase, PGP, phosphogly 48.7 27 0.00094 24.4 4.8 45 3-47 85-133 (222)
114 1wr8_A Phosphoglycolate phosph 48.0 35 0.0012 24.3 5.3 36 6-41 25-60 (231)
115 2pq0_A Hypothetical conserved 47.4 30 0.001 24.9 4.8 38 7-44 26-63 (258)
116 3kbb_A Phosphorylated carbohyd 47.1 32 0.0011 23.6 4.8 62 3-64 86-153 (216)
117 2o2x_A Hypothetical protein; s 46.8 47 0.0016 23.3 5.8 38 3-40 58-110 (218)
118 3kzx_A HAD-superfamily hydrola 46.5 24 0.00082 24.4 4.1 45 3-47 105-153 (231)
119 1vq8_F 50S ribosomal protein L 46.3 50 0.0017 21.9 5.5 43 4-46 32-79 (120)
120 1nrw_A Hypothetical protein, h 46.2 37 0.0013 25.0 5.3 36 7-42 27-62 (288)
121 2fc3_A 50S ribosomal protein L 46.0 57 0.0019 21.8 5.8 43 4-46 31-78 (124)
122 3s6j_A Hydrolase, haloacid deh 45.8 30 0.001 23.6 4.5 39 3-41 93-131 (233)
123 4as2_A Phosphorylcholine phosp 45.7 16 0.00055 28.7 3.3 44 3-46 145-194 (327)
124 2yxb_A Coenzyme B12-dependent 45.7 73 0.0025 22.1 6.7 47 3-49 83-131 (161)
125 1nf2_A Phosphatase; structural 45.3 32 0.0011 25.1 4.8 35 6-42 25-59 (268)
126 2no4_A (S)-2-haloacid dehaloge 45.2 37 0.0013 23.7 5.0 43 4-46 108-154 (240)
127 2zkr_f 60S ribosomal protein L 45.1 45 0.0015 25.9 5.7 44 3-46 137-185 (266)
128 4a17_F RPL7A, 60S ribosomal pr 44.8 52 0.0018 25.4 6.0 45 3-47 126-175 (255)
129 3ab8_A Putative uncharacterize 44.7 21 0.00073 25.8 3.7 42 4-47 199-242 (268)
130 3kht_A Response regulator; PSI 44.4 58 0.002 20.6 5.7 56 6-62 18-75 (144)
131 2zos_A MPGP, mannosyl-3-phosph 44.4 24 0.00084 25.6 4.0 34 8-41 24-57 (249)
132 3on1_A BH2414 protein; structu 44.1 61 0.0021 20.7 5.8 42 4-45 21-66 (101)
133 1zcc_A Glycerophosphodiester p 43.9 49 0.0017 24.3 5.7 41 7-47 184-224 (248)
134 3umb_A Dehalogenase-like hydro 43.6 36 0.0012 23.3 4.7 44 3-46 101-148 (233)
135 1toa_A Tromp-1, protein (perip 43.1 31 0.001 26.8 4.6 41 2-42 231-277 (313)
136 1tz9_A Mannonate dehydratase; 43.0 70 0.0024 24.7 6.7 46 4-49 55-118 (367)
137 1rlg_A 50S ribosomal protein L 42.1 51 0.0017 21.8 5.0 43 4-46 30-77 (119)
138 4ex6_A ALNB; modified rossman 42.0 28 0.00097 24.1 3.9 46 3-48 106-155 (237)
139 3o85_A Ribosomal protein L7AE; 41.5 62 0.0021 21.7 5.4 43 4-46 34-81 (122)
140 3sd7_A Putative phosphatase; s 41.5 31 0.0011 24.0 4.1 62 3-64 112-179 (240)
141 2kg4_A Growth arrest and DNA-d 41.4 28 0.00096 25.2 3.8 44 4-47 38-94 (165)
142 2xhf_A Peroxiredoxin 5; oxidor 41.4 65 0.0022 22.7 5.8 37 4-40 63-100 (171)
143 1zrn_A L-2-haloacid dehalogena 41.4 45 0.0015 22.9 4.9 43 4-46 98-144 (232)
144 3nvb_A Uncharacterized protein 41.0 47 0.0016 26.9 5.5 59 3-64 258-324 (387)
145 2gmw_A D,D-heptose 1,7-bisphos 41.0 39 0.0013 23.8 4.6 39 3-41 52-105 (211)
146 2l09_A ASR4154 protein; proto- 40.8 8.1 0.00028 23.7 0.7 26 17-43 15-40 (62)
147 1rkq_A Hypothetical protein YI 40.8 47 0.0016 24.4 5.2 31 11-41 32-62 (282)
148 2hi0_A Putative phosphoglycola 40.3 45 0.0016 23.4 4.9 62 4-65 113-179 (240)
149 3v7q_A Probable ribosomal prot 39.9 72 0.0025 20.4 5.9 42 4-45 22-67 (101)
150 3iz5_f 60S ribosomal protein L 39.6 66 0.0022 21.3 5.2 43 4-46 29-75 (112)
151 3jyw_G 60S ribosomal protein L 39.5 38 0.0013 22.7 4.0 45 3-47 27-76 (113)
152 3ar4_A Sarcoplasmic/endoplasmi 39.5 88 0.003 28.0 7.5 38 4-41 606-643 (995)
153 1we0_A Alkyl hydroperoxide red 39.4 55 0.0019 22.3 5.1 36 3-38 51-86 (187)
154 3u5r_E Uncharacterized protein 39.4 50 0.0017 23.5 5.0 43 3-45 78-128 (218)
155 1rku_A Homoserine kinase; phos 39.2 42 0.0014 22.8 4.4 41 3-44 71-111 (206)
156 3um9_A Haloacid dehalogenase, 39.2 46 0.0016 22.6 4.7 38 3-40 98-135 (230)
157 2fpr_A Histidine biosynthesis 39.1 34 0.0012 23.5 3.9 39 3-41 44-97 (176)
158 3mc1_A Predicted phosphatase, 38.3 35 0.0012 23.3 3.9 63 3-65 88-156 (226)
159 3fzq_A Putative hydrolase; YP_ 38.2 40 0.0014 24.1 4.3 40 7-46 28-67 (274)
160 3cpq_A 50S ribosomal protein L 38.1 82 0.0028 20.5 5.9 42 4-45 24-69 (110)
161 4e7p_A Response regulator; DNA 38.0 78 0.0027 20.2 6.0 63 6-69 33-96 (150)
162 3mpo_A Predicted hydrolase of 37.9 67 0.0023 23.1 5.6 36 6-41 27-62 (279)
163 1qyi_A ZR25, hypothetical prot 37.8 43 0.0015 26.9 4.8 39 3-41 217-255 (384)
164 1xzo_A BSSCO, hypothetical pro 37.5 80 0.0028 20.7 5.6 40 3-42 53-98 (174)
165 1mhs_A Proton pump, plasma mem 37.4 76 0.0026 28.5 6.7 38 4-41 538-575 (920)
166 2bmx_A Alkyl hydroperoxidase C 37.3 51 0.0018 22.7 4.7 36 3-38 65-100 (195)
167 3izc_H 60S ribosomal protein R 37.3 67 0.0023 24.8 5.6 45 3-47 133-182 (256)
168 2hoq_A Putative HAD-hydrolase 36.4 53 0.0018 22.9 4.7 44 3-46 96-143 (241)
169 4eek_A Beta-phosphoglucomutase 36.4 50 0.0017 23.3 4.5 39 3-41 112-150 (259)
170 2pn8_A Peroxiredoxin-4; thiore 36.4 48 0.0016 23.6 4.4 36 3-38 68-103 (211)
171 4dad_A Putative pilus assembly 36.2 59 0.002 20.6 4.6 62 6-69 33-97 (146)
172 3g8r_A Probable spore coat pol 36.0 62 0.0021 26.0 5.4 41 1-43 75-115 (350)
173 1uul_A Tryparedoxin peroxidase 35.3 52 0.0018 22.9 4.5 36 3-38 56-91 (202)
174 4dw8_A Haloacid dehalogenase-l 35.3 87 0.003 22.5 5.8 35 6-40 27-61 (279)
175 2ywi_A Hypothetical conserved 35.1 87 0.003 21.1 5.6 40 3-42 65-112 (196)
176 2kru_A Light-independent proto 35.1 8.1 0.00028 23.7 0.0 26 17-43 16-41 (63)
177 1prx_A HORF6; peroxiredoxin, h 34.9 86 0.0029 22.6 5.7 35 3-37 51-85 (224)
178 3cis_A Uncharacterized protein 34.5 25 0.00085 26.2 2.7 29 18-48 248-276 (309)
179 3j21_Z 50S ribosomal protein L 34.4 89 0.003 19.8 6.3 42 4-45 18-63 (99)
180 2om6_A Probable phosphoserine 34.1 69 0.0024 21.7 4.9 38 3-40 101-141 (235)
181 3obe_A Sugar phosphate isomera 33.9 1.4E+02 0.0047 22.3 6.9 44 5-48 77-136 (305)
182 3dnp_A Stress response protein 33.8 79 0.0027 22.8 5.4 35 7-41 29-63 (290)
183 2vup_A Glutathione peroxidase- 33.8 75 0.0026 21.7 5.1 43 3-45 67-118 (190)
184 2l5o_A Putative thioredoxin; s 33.7 93 0.0032 19.8 5.7 39 4-42 48-88 (153)
185 4ap9_A Phosphoserine phosphata 33.7 17 0.00057 24.4 1.5 40 3-43 81-120 (201)
186 2c0d_A Thioredoxin peroxidase 33.5 58 0.002 23.5 4.6 36 3-38 76-111 (221)
187 2aif_A Ribosomal protein L7A; 33.5 94 0.0032 21.1 5.4 42 4-45 44-90 (135)
188 3op6_A Uncharacterized protein 33.5 27 0.00093 23.9 2.6 34 6-39 4-37 (152)
189 3vyw_A MNMC2; tRNA wobble urid 33.2 11 0.00037 29.9 0.5 47 17-64 165-212 (308)
190 2qxy_A Response regulator; reg 32.9 91 0.0031 19.5 5.4 61 6-69 17-77 (142)
191 2wqp_A Polysialic acid capsule 32.8 61 0.0021 25.9 4.9 41 1-43 88-128 (349)
192 2pw9_A Putative formate dehydr 32.7 53 0.0018 25.3 4.3 38 8-45 206-243 (268)
193 1y80_A Predicted cobalamin bin 32.7 1.3E+02 0.0045 21.3 6.9 46 5-50 104-150 (210)
194 1w41_A 50S ribosomal protein L 32.6 96 0.0033 19.7 6.0 42 4-45 19-64 (101)
195 3lwa_A Secreted thiol-disulfid 32.2 1.1E+02 0.0036 20.5 5.6 43 3-45 78-128 (183)
196 3raz_A Thioredoxin-related pro 32.1 40 0.0014 21.9 3.2 41 4-44 44-84 (151)
197 3eyt_A Uncharacterized protein 32.1 42 0.0015 21.8 3.3 40 3-42 48-94 (158)
198 3qpm_A Peroxiredoxin; oxidored 32.0 61 0.0021 23.7 4.5 36 3-38 97-132 (240)
199 2o55_A Putative glycerophospho 31.9 1E+02 0.0035 22.6 5.8 39 8-47 203-245 (258)
200 1xvw_A Hypothetical protein RV 31.9 21 0.00072 23.6 1.7 39 4-42 57-95 (160)
201 2hcf_A Hydrolase, haloacid deh 31.8 55 0.0019 22.3 4.0 39 3-41 95-134 (234)
202 1zof_A Alkyl hydroperoxide-red 31.7 47 0.0016 22.9 3.7 35 3-37 53-87 (198)
203 2jnb_A NHP2-like protein 1; sp 31.4 17 0.00058 25.5 1.2 43 4-46 53-100 (144)
204 3dxy_A TRNA (guanine-N(7)-)-me 31.3 96 0.0033 22.1 5.4 46 2-47 67-113 (218)
205 2zg6_A Putative uncharacterize 31.1 55 0.0019 22.6 4.0 36 4-40 98-133 (220)
206 1zye_A Thioredoxin-dependent p 30.9 75 0.0026 22.7 4.8 36 3-38 76-111 (220)
207 1te2_A Putative phosphatase; s 30.8 90 0.0031 20.8 5.0 44 4-47 97-144 (226)
208 3hdv_A Response regulator; PSI 30.8 97 0.0033 19.2 5.5 57 6-63 20-77 (136)
209 2fea_A 2-hydroxy-3-keto-5-meth 30.7 38 0.0013 23.9 3.1 45 3-47 79-124 (236)
210 1xpj_A Hypothetical protein; s 30.7 1.1E+02 0.0036 19.9 5.2 38 4-41 27-79 (126)
211 2wuj_A Septum site-determining 30.5 25 0.00086 20.7 1.7 14 85-98 21-34 (57)
212 3ks6_A Glycerophosphoryl diest 29.9 1.2E+02 0.0039 22.3 5.8 36 11-47 198-233 (250)
213 3pct_A Class C acid phosphatas 29.9 73 0.0025 24.3 4.7 108 3-119 103-227 (260)
214 3qvq_A Phosphodiesterase OLEI0 29.8 99 0.0034 22.7 5.4 39 8-47 201-239 (252)
215 3lor_A Thiol-disulfide isomera 29.8 49 0.0017 21.5 3.3 40 3-42 50-96 (160)
216 3cnh_A Hydrolase family protei 29.7 73 0.0025 21.3 4.3 37 3-40 88-124 (200)
217 3cis_A Uncharacterized protein 29.2 52 0.0018 24.4 3.7 59 5-65 83-153 (309)
218 2otd_A Glycerophosphodiester p 29.2 1.2E+02 0.0042 22.0 5.8 39 8-47 198-236 (247)
219 2obb_A Hypothetical protein; s 29.2 82 0.0028 21.6 4.5 46 5-50 28-77 (142)
220 1vd6_A Glycerophosphoryl diest 29.2 1.1E+02 0.0038 21.9 5.5 40 7-47 176-215 (224)
221 3u5c_M 40S ribosomal protein S 29.1 36 0.0012 23.9 2.6 44 4-47 43-93 (143)
222 2i33_A Acid phosphatase; HAD s 29.0 57 0.0019 24.3 3.9 38 4-41 104-144 (258)
223 3pgv_A Haloacid dehalogenase-l 28.8 95 0.0032 22.6 5.1 35 7-41 44-78 (285)
224 2h01_A 2-Cys peroxiredoxin; th 28.6 73 0.0025 21.8 4.2 36 3-38 51-86 (192)
225 3gk0_A PNP synthase, pyridoxin 28.5 1E+02 0.0036 24.0 5.3 45 3-48 141-185 (278)
226 4gqc_A Thiol peroxidase, perox 28.3 18 0.00061 24.8 0.9 43 5-47 55-98 (164)
227 2zxe_A Na, K-ATPase alpha subu 28.2 59 0.002 29.4 4.5 38 4-41 602-639 (1028)
228 1zrj_A E1B-55KDA-associated pr 28.2 62 0.0021 18.6 3.1 29 5-36 14-42 (50)
229 1h1j_S THO1 protein; SAP domai 28.0 63 0.0021 18.7 3.1 28 6-36 10-37 (51)
230 2go7_A Hydrolase, haloacid deh 28.0 87 0.003 20.4 4.4 37 3-40 87-123 (207)
231 1r7h_A NRDH-redoxin; thioredox 27.7 85 0.0029 17.5 4.2 34 7-40 15-48 (75)
232 3ddh_A Putative haloacid dehal 27.6 73 0.0025 21.4 4.1 44 3-46 107-155 (234)
233 2ioj_A Hypothetical protein AF 27.5 1.1E+02 0.0038 20.3 4.9 33 19-51 54-86 (139)
234 2ggt_A SCO1 protein homolog, m 27.5 1.2E+02 0.0042 19.5 5.1 43 3-45 43-93 (164)
235 3o6c_A PNP synthase, pyridoxin 27.4 1.1E+02 0.0039 23.6 5.4 44 4-48 111-154 (260)
236 4a18_G RPL30; ribosome, eukary 27.3 95 0.0032 19.9 4.3 40 4-43 25-68 (104)
237 1ccw_A Protein (glutamate muta 27.3 1.1E+02 0.0037 20.5 4.8 52 4-56 69-129 (137)
238 3eul_A Possible nitrate/nitrit 27.3 1.2E+02 0.0042 19.2 5.7 61 7-69 29-91 (152)
239 1qmv_A Human thioredoxin perox 27.3 61 0.0021 22.4 3.6 36 3-38 54-89 (197)
240 3b2n_A Uncharacterized protein 27.1 1.2E+02 0.004 18.9 6.1 61 7-69 17-79 (133)
241 3u5e_c L32, RP73, YL38, 60S ri 27.0 1.3E+02 0.0044 19.3 5.3 40 4-43 25-68 (105)
242 3p6l_A Sugar phosphate isomera 26.7 1.4E+02 0.0046 21.3 5.6 45 4-48 63-113 (262)
243 2i81_A 2-Cys peroxiredoxin; st 26.5 76 0.0026 22.6 4.1 36 3-38 72-107 (213)
244 1exn_A 5'-exonuclease, 5'-nucl 26.4 88 0.003 24.2 4.7 33 6-38 104-139 (290)
245 4do7_A Amidohydrolase 2; enzym 26.3 1.8E+02 0.0063 21.6 6.4 58 5-62 123-191 (303)
246 2b30_A Pvivax hypothetical pro 26.3 63 0.0021 24.2 3.8 29 11-39 55-85 (301)
247 3ixz_A Potassium-transporting 26.0 80 0.0027 28.5 4.9 38 4-41 607-644 (1034)
248 3dao_A Putative phosphatse; st 25.9 1.1E+02 0.0038 22.2 5.1 36 6-41 44-79 (283)
249 3ocu_A Lipoprotein E; hydrolas 25.9 72 0.0024 24.3 4.0 107 3-119 103-227 (262)
250 2qjg_A Putative aldolase MJ040 25.9 1.8E+02 0.0061 21.3 6.2 58 5-65 133-202 (273)
251 3tjj_A Peroxiredoxin-4; thiore 25.7 79 0.0027 23.5 4.2 36 3-38 111-146 (254)
252 2gs3_A PHGPX, GPX-4, phospholi 25.7 1.1E+02 0.0039 20.7 4.8 43 3-45 68-118 (185)
253 2qy6_A UPF0209 protein YFCK; s 25.7 27 0.00093 26.3 1.5 42 18-59 150-194 (257)
254 2j5v_A Glutamate 5-kinase; pro 25.6 1.4E+02 0.0047 23.7 5.8 45 13-57 224-269 (367)
255 3kij_A Probable glutathione pe 25.4 94 0.0032 21.0 4.3 42 3-44 57-107 (180)
256 1j0a_A 1-aminocyclopropane-1-c 25.3 2.2E+02 0.0076 21.5 7.0 46 6-51 84-131 (325)
257 1q2h_A APS, adaptor protein wi 25.3 24 0.00081 22.0 0.9 26 100-125 20-48 (69)
258 1vli_A Spore coat polysacchari 25.3 69 0.0024 26.0 4.0 41 1-43 98-138 (385)
259 4i6k_A Amidohydrolase family p 25.3 1E+02 0.0034 22.9 4.7 60 4-63 137-201 (294)
260 2d59_A Hypothetical protein PH 25.2 1.5E+02 0.0051 19.8 5.3 46 6-52 90-136 (144)
261 4g2e_A Peroxiredoxin; redox pr 25.1 28 0.00094 23.5 1.4 38 5-42 52-89 (157)
262 4a5z_A MITD1, MIT domain-conta 25.1 68 0.0023 23.1 3.5 36 3-48 87-122 (163)
263 2rbk_A Putative uncharacterize 25.1 24 0.00082 25.5 1.1 32 7-39 26-57 (261)
264 3cg6_A Growth arrest and DNA-d 25.0 1.3E+02 0.0045 21.2 4.9 54 3-58 27-93 (146)
265 3d6j_A Putative haloacid dehal 24.9 1E+02 0.0034 20.6 4.3 37 4-40 92-128 (225)
266 2do5_A Splicing factor 3B subu 24.7 54 0.0019 19.3 2.4 26 6-34 13-38 (58)
267 2p11_A Hypothetical protein; p 24.7 91 0.0031 21.7 4.2 37 3-40 98-134 (231)
268 3grc_A Sensor protein, kinase; 24.5 1.3E+02 0.0045 18.6 6.0 55 6-62 19-74 (140)
269 1w2w_B 5-methylthioribose-1-ph 24.3 80 0.0027 22.9 3.8 64 3-71 16-89 (191)
270 3eod_A Protein HNR; response r 24.3 1.3E+02 0.0044 18.4 5.3 61 6-69 20-81 (130)
271 1use_A VAsp, vasodilator-stimu 24.3 66 0.0023 18.3 2.6 16 88-103 8-25 (45)
272 1z21_A YOP proteins translocat 24.2 34 0.0012 23.1 1.6 12 91-103 94-105 (112)
273 3b8c_A ATPase 2, plasma membra 24.2 64 0.0022 28.8 3.9 38 4-41 491-528 (885)
274 1m5w_A Pyridoxal phosphate bio 24.1 1.4E+02 0.0047 22.9 5.2 45 3-48 113-157 (243)
275 3i8o_A KH domain-containing pr 24.0 1.1E+02 0.0038 21.3 4.4 43 4-47 55-113 (142)
276 3ztl_A Thioredoxin peroxidase; 24.0 85 0.0029 22.3 4.0 36 3-38 89-124 (222)
277 3l12_A Putative glycerophospho 23.9 1.5E+02 0.005 22.5 5.5 39 8-47 259-297 (313)
278 3nuq_A Protein SSM1, putative 23.8 1.1E+02 0.0038 21.8 4.6 38 3-40 144-183 (282)
279 3iz5_H 60S ribosomal protein L 23.7 98 0.0033 23.9 4.3 43 4-46 130-177 (258)
280 3ewi_A N-acylneuraminate cytid 23.7 51 0.0017 22.9 2.6 48 11-64 46-95 (168)
281 2kvu_A MKL/myocardin-like prot 23.6 76 0.0026 20.0 3.1 29 5-36 30-58 (75)
282 2p5q_A Glutathione peroxidase 23.6 1.4E+02 0.0049 19.3 4.8 42 3-44 51-101 (170)
283 3i10_A Putative glycerophospho 23.4 98 0.0033 23.5 4.4 41 7-47 208-263 (278)
284 1vjr_A 4-nitrophenylphosphatas 23.3 1.4E+02 0.0048 21.1 5.0 35 7-41 39-76 (271)
285 3iru_A Phoshonoacetaldehyde hy 23.3 81 0.0028 22.1 3.7 62 3-64 113-181 (277)
286 1zco_A 2-dehydro-3-deoxyphosph 23.1 1.2E+02 0.0041 22.9 4.8 38 3-43 73-110 (262)
287 3no3_A Glycerophosphodiester p 22.9 1.4E+02 0.0048 21.7 5.1 39 8-47 187-225 (238)
288 1h75_A Glutaredoxin-like prote 22.5 1.2E+02 0.004 17.3 3.9 20 7-26 15-34 (81)
289 1ass_A Thermosome; chaperonin, 22.2 1.7E+02 0.0058 20.2 5.2 38 6-43 61-98 (159)
290 2a0u_A Initiation factor 2B; S 22.2 1.3E+02 0.0044 24.3 5.0 64 3-71 223-294 (383)
291 3hcz_A Possible thiol-disulfid 22.0 1.5E+02 0.0052 18.5 5.8 45 3-47 50-97 (148)
292 3h1g_A Chemotaxis protein CHEY 22.0 1.5E+02 0.005 18.2 5.3 57 6-62 18-75 (129)
293 2obi_A PHGPX, GPX-4, phospholi 22.0 1.5E+02 0.0051 19.9 4.8 43 3-45 66-116 (183)
294 3zvl_A Bifunctional polynucleo 21.9 2.5E+02 0.0084 22.2 6.7 62 3-64 89-166 (416)
295 2fi1_A Hydrolase, haloacid deh 21.9 1.6E+02 0.0054 19.2 4.8 37 3-40 84-120 (190)
296 2p31_A CL683, glutathione pero 21.9 1.3E+02 0.0046 20.2 4.5 41 4-44 69-118 (181)
297 2i7d_A 5'(3')-deoxyribonucleot 21.9 31 0.0011 23.7 1.2 23 5-27 77-100 (193)
298 3cg4_A Response regulator rece 21.9 1.5E+02 0.0051 18.3 4.9 55 6-62 20-75 (142)
299 3i42_A Response regulator rece 21.8 1.4E+02 0.0049 18.1 5.2 56 6-63 16-72 (127)
300 1jfu_A Thiol:disulfide interch 21.8 1.2E+02 0.0041 20.2 4.3 44 4-47 80-127 (186)
301 2lnd_A De novo designed protei 21.8 1.7E+02 0.0058 18.9 4.6 51 2-52 36-91 (112)
302 3tfw_A Putative O-methyltransf 21.8 1.9E+02 0.0066 20.7 5.6 62 3-65 98-161 (248)
303 4hde_A SCO1/SENC family lipopr 21.7 1.2E+02 0.0042 20.5 4.3 39 3-41 52-96 (170)
304 2yzh_A Probable thiol peroxida 21.7 80 0.0027 21.1 3.3 40 5-46 69-110 (171)
305 1yns_A E-1 enzyme; hydrolase f 21.6 1.6E+02 0.0053 21.3 5.1 35 3-37 132-166 (261)
306 2i2x_B MTAC, methyltransferase 21.4 2.5E+02 0.0086 20.7 7.0 47 5-51 139-186 (258)
307 2pz0_A Glycerophosphoryl diest 21.2 1.2E+02 0.0041 22.2 4.4 40 7-47 201-240 (252)
308 3bdk_A D-mannonate dehydratase 21.2 2.5E+02 0.0085 22.4 6.5 46 4-49 64-127 (386)
309 3kcm_A Thioredoxin family prot 21.1 1.5E+02 0.0052 18.8 4.5 39 4-42 48-88 (154)
310 3hzh_A Chemotaxis response reg 21.1 1.7E+02 0.0059 18.7 6.8 62 6-69 49-113 (157)
311 1xcc_A 1-Cys peroxiredoxin; un 21.1 1.3E+02 0.0045 21.5 4.5 33 4-36 52-84 (220)
312 3dv9_A Beta-phosphoglucomutase 21.1 76 0.0026 21.8 3.1 34 4-37 111-144 (247)
313 2v2g_A Peroxiredoxin 6; oxidor 21.1 91 0.0031 22.8 3.7 33 4-36 50-82 (233)
314 2yvk_A Methylthioribose-1-phos 21.0 1.4E+02 0.0048 24.0 5.0 64 3-71 219-290 (374)
315 3lmz_A Putative sugar isomeras 20.9 1.7E+02 0.0059 20.8 5.2 44 3-46 60-109 (257)
316 3f6c_A Positive transcription 20.9 1.5E+02 0.0053 18.1 5.7 62 6-69 14-76 (134)
317 3hv2_A Response regulator/HD d 20.8 1.7E+02 0.0058 18.6 5.8 61 6-69 27-88 (153)
318 1o1z_A GDPD, glycerophosphodie 20.8 1.5E+02 0.0053 21.4 4.9 39 7-47 188-226 (234)
319 2nly_A BH1492 protein, diverge 20.8 2.2E+02 0.0075 21.4 5.8 44 3-47 114-162 (245)
320 3ff4_A Uncharacterized protein 20.8 1.2E+02 0.004 20.2 3.9 37 7-43 72-109 (122)
321 2i6x_A Hydrolase, haloacid deh 20.7 1.4E+02 0.0049 19.9 4.5 33 4-37 92-124 (211)
322 3tva_A Xylose isomerase domain 20.6 2.4E+02 0.0082 20.3 6.0 47 3-49 50-125 (290)
323 3ozi_A L6TR; plant TIR domain, 20.5 1.5E+02 0.0051 21.9 4.7 51 6-58 52-108 (204)
324 1psq_A Probable thiol peroxida 20.3 90 0.0031 20.7 3.3 40 5-46 64-105 (163)
325 1t5o_A EIF2BD, translation ini 20.2 1.4E+02 0.0047 23.8 4.7 64 3-71 192-262 (351)
No 1
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=99.81 E-value=4.9e-20 Score=156.69 Aligned_cols=128 Identities=41% Similarity=0.750 Sum_probs=106.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC---CC-------------
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL---PK------------- 66 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l---~~------------- 66 (131)
++||.+|+++|+++||+|++++|+|.++ ++|+++++|+.|++|.+|....++|.++|++.+ ..
T Consensus 94 ~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~V~~d~ep~~~~r~rD~~V~~~l~~~~~gi~~~~~~~~~l~ 172 (506)
T 3umv_A 94 LRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGASTLVADFSPLRPVREALDAVVGDLRREAPGVAVHQVDAHNVV 172 (506)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTSEEEEECCSCSS
T ss_pred HHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCEEEeccChhHHHHHHHHHHHHHHhhccCCeEEEEeCCcEEE
Confidence 6899999999999999999999999999 999999999999999999999999998887432 00
Q ss_pred -----------------------------C---------------------------------ch---------------
Q psy15173 67 -----------------------------D---------------------------------VP--------------- 69 (131)
Q Consensus 67 -----------------------------~---------------------------------~p--------------- 69 (131)
. +|
T Consensus 173 ~p~~v~~~~~~~~~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Ge~~A~~~ 252 (506)
T 3umv_A 173 PVWTASAKMEYSAKTFRGKVSKVMDEYLVEFPELPAVVPWDREQPEGVDWDALIARVCSEAENVPEIDWCEPGEEAAIEA 252 (506)
T ss_dssp CHHHHCSSCCSSHHHHHHHHHTTHHHHSCCCCCCCCCCCCCSCCCCCCCHHHHHHHHHHTSCCCCCCCSSCCSHHHHHHH
T ss_pred CcccccCCCCCCccCHHHHHHHhccccccCCCCCCCccccccccccccChhhhhhhhccccccccccCCCCCCHHHHHHH
Confidence 0 00
Q ss_pred -------HHH----------------------------------HHHHHHHhhCCCChhhHHHHHHHHHHHHhhcchhcc
Q psy15173 70 -------LIQ----------------------------------RAVLEVRRVLPKHSKAVDSFCEEAIVRRELADNFCY 108 (131)
Q Consensus 70 -------~~~----------------------------------r~al~v~~~~~~~~~~~~~fleElivrRELa~Nfc~ 108 (131)
|++ +|+.++.+......+++++|++||+.|||+++|||+
T Consensus 253 L~~~~~~Fl~~~l~~Y~~~Rd~p~~~~~tS~LSPyL~~G~lS~r~v~~~~~~~~~~~~~~~~~f~~eL~WRREf~~~~~~ 332 (506)
T 3umv_A 253 LLGSKDGFLTKRIKSYETDRNDPTKPRALSGLSPYLHFGHISAQRCALEAKKCRHLSPKSVDAFLEELVVRRELADNFCY 332 (506)
T ss_dssp HHCTTTCHHHHTGGGHHHHTTCTTCGGGSCCCHHHHHHTSSCHHHHHHHHHHHGGGSHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHhhHHHHHHhHHhhhccccCCccccCCCccCCHHHhCCCcCHHHHHHHHHHHHhhccccHHHHHHHHHHhHHHHHHHHH
Confidence 111 555555443333456789999999988999999999
Q ss_pred ccCCCCcccchHHHHHHHHHhhC
Q psy15173 109 YNKNYDKVEGAFDWAKKTLNDHR 131 (131)
Q Consensus 109 yn~~YDs~~~~p~WA~~TL~~H~ 131 (131)
|+|+||++.+.+.|+++||..|+
T Consensus 333 ~~p~~~~~~~~~~w~~~~l~~~~ 355 (506)
T 3umv_A 333 YQPQYDSLSGAWEWARKTLMDHA 355 (506)
T ss_dssp HCTTTTSGGGSCHHHHHHHHHTT
T ss_pred hCcchhhhhccchhhhhhhhhhc
Confidence 99999999999999999999874
No 2
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=99.80 E-value=2.5e-19 Score=150.71 Aligned_cols=127 Identities=34% Similarity=0.630 Sum_probs=108.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCCC----------------
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLPK---------------- 66 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~~---------------- 66 (131)
++||++|+++|+++||+|+++.|+|.++|++++++++|+.|++|+.|.+..++|.+.+++.+..
T Consensus 91 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~~~~~~v~~~lgi~~~~~~~~~l~~~~~~ 170 (482)
T 2xry_A 91 LKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA 170 (482)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHCCSCEEEECCSSSSCHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCEEEEecccchhHHHHHHHHHHHcCCEEEEEeCCEEcccccc
Confidence 6899999999999999999999999999999999999999999999999999999987764421
Q ss_pred ------------------------C-------------------------------ch----------------------
Q psy15173 67 ------------------------D-------------------------------VP---------------------- 69 (131)
Q Consensus 67 ------------------------~-------------------------------~p---------------------- 69 (131)
. +|
T Consensus 171 ~~~~~~~v~tf~~~~~~~~~~~~~~~p~~~p~~~~~~lp~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (482)
T 2xry_A 171 SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPELSAGAGMVETLSDVLETGVKALLPERALLKNKDPLFEPWHFEP 250 (482)
T ss_dssp CSSCCSSHHHHHHHHHHHHHHHCCCCCCCCCCSSCCC---------CHHHHHHHHHHHHGGGCCBCTTSCBCCCTTSCCC
T ss_pred ccCCCCceecchHHHHHHHHhhccccCCCCCCCCccccCCccchhhhhhhhcccCCCCCcchhhhccccccccccCCCCC
Confidence 0 00
Q ss_pred -----------HHH---------------------------------HHHHHHHhhCCCChhhHHHHHHHHHHHHhhcch
Q psy15173 70 -----------LIQ---------------------------------RAVLEVRRVLPKHSKAVDSFCEEAIVRRELADN 105 (131)
Q Consensus 70 -----------~~~---------------------------------r~al~v~~~~~~~~~~~~~fleElivrRELa~N 105 (131)
|++ +|+.++.+... ..++++.|+.|||+|||++.+
T Consensus 251 Ge~~A~~~L~~Fl~~~l~~Y~~~Rd~p~~~~tS~LSPyL~~G~LSpR~v~~~~~~~~~-~~~~~e~fl~ELi~WREf~~~ 329 (482)
T 2xry_A 251 GEKAAKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAES-NPGSKKAFLDEILIWKEISDN 329 (482)
T ss_dssp SHHHHHHHHHHHHHHTHHHHHHHTTCTTSCCSCCCHHHHHTTSSCHHHHHHHHHHCCC-CTTHHHHHHHHHTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhhccccCCCCccCCCCcCHHHhCCccCHHHHHHHHHHhhc-ccccHHHHHHHHHHHHHHHHH
Confidence 000 67666655332 346799999999999999999
Q ss_pred hccccCCCCcccchHHHHHHHHHhh
Q psy15173 106 FCYYNKNYDKVEGAFDWAKKTLNDH 130 (131)
Q Consensus 106 fc~yn~~YDs~~~~p~WA~~TL~~H 130 (131)
||+|+|+|++++++|.|+++||+.|
T Consensus 330 ~~~~~P~~~~~~~~~~w~~~~~~~~ 354 (482)
T 2xry_A 330 FCYYNPGYDGFESFPSWAKESLNAH 354 (482)
T ss_dssp HHHHCTTTTSGGGSCHHHHHHHHHT
T ss_pred HHHhCCcccccccchHHHhhhhhhc
Confidence 9999999999999999999999876
No 3
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=99.56 E-value=6.8e-15 Score=122.16 Aligned_cols=62 Identities=15% Similarity=0.051 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++||++|+++|+++||+|+++.|+|.++|++++++++|+.|++|++|.+..+++.+.|++.+
T Consensus 51 ~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~rd~~v~~~l 112 (420)
T 2j07_A 51 LENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKAVYALTSHTPYGRYRDGRVREAL 112 (420)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEecccChhHHHHHHHHHHHc
Confidence 68999999999999999999999999999999999999999999999999999999998754
No 4
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=99.48 E-value=2.6e-14 Score=120.23 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEE----eCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFL----IGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~----~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++||++|+++|+++||+|+++ .|+|.++|++++++++|+.|++|++|.+..+++.+.|++.+
T Consensus 55 ~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~rd~~v~~~l 120 (471)
T 1dnp_A 55 NAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERAL 120 (471)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCCEEEEecccCchHHHHHHHHHHHh
Confidence 689999999999999999999 89999999999999999999999999999999999987755
No 5
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=99.47 E-value=2.5e-14 Score=122.39 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=56.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHh
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKK 62 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~ 62 (131)
+++|.+|+++|+++||+|+++.|+|.++|++|+++++|+.|++|++|.+..+++.+.|++
T Consensus 67 ~~sL~~L~~~L~~~G~~L~v~~G~~~~vl~~L~~~~~~~~V~~n~~~~p~~~~RD~~v~~ 126 (537)
T 3fy4_A 67 LESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKD 126 (537)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHTTSCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999998888777654
No 6
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=99.40 E-value=2.5e-13 Score=114.97 Aligned_cols=60 Identities=8% Similarity=0.014 Sum_probs=54.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEe-CCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHh
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLI-GGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKK 62 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~-G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~ 62 (131)
+++|++|+++|+++||+|+++. |++.++|++++++++|+.|++|.+|.+..++....|.+
T Consensus 64 ~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~V~~~~~~~p~~~~rd~~v~~ 124 (509)
T 1u3d_A 64 KNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKD 124 (509)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCEEEEecccCHHHHHHHHHHHH
Confidence 6899999999999999999998 69999999999999999999999998887777776654
No 7
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=99.35 E-value=9.5e-13 Score=110.89 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=58.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++||++|+++|+++||+|+++.|+|.++|++++++++|+.|++|++|.+..+++.+.|++.+
T Consensus 56 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~p~~~~rd~~v~~~l 117 (484)
T 1owl_A 56 QGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAAL 117 (484)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEeccCChhHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999977643
No 8
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=99.34 E-value=3.8e-13 Score=114.84 Aligned_cols=58 Identities=14% Similarity=0.251 Sum_probs=52.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTL 60 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v 60 (131)
+++|++|+++|+++||+|+++.|+|.++|++++++++|+.|+++++|.+..+...+.|
T Consensus 88 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~p~~~~rd~~v 145 (543)
T 2wq7_A 88 QQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAV 145 (543)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEEEEEEECCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEecCcCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999988765554443
No 9
>3tvs_A Cryptochrome-1; circadian clock light entrainment, jetlag, phosphorylation, gene regulation, signaling protein; HET: TPO FAD; 2.30A {Drosophila melanogaster} PDB: 4gu5_A*
Probab=99.29 E-value=1.1e-12 Score=112.17 Aligned_cols=60 Identities=10% Similarity=0.113 Sum_probs=56.7
Q ss_pred hhhHHHHHHHHhhc---CCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHh
Q psy15173 3 QLGLKEVHEDCKKL---NIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKK 62 (131)
Q Consensus 3 ~~gL~el~~~L~~~---gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~ 62 (131)
+++|.+|+++|+++ ||+|++++|+|.++|++|+++++|+.|++|++|.+..+++.+.|++
T Consensus 60 ~~sL~~L~~~L~~~~~~G~~L~v~~G~~~~vl~~L~~~~~a~~V~~n~~~~~~~~~RD~~v~~ 122 (538)
T 3tvs_A 60 LDSLQDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRS 122 (538)
T ss_dssp HHHHHHHHHHGGGSCSSSSCCEEEESCHHHHHHHHHHHHCEEEECEECCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHHHHHH
Confidence 68999999999999 9999999999999999999999999999999999999988877654
No 10
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=99.24 E-value=9e-12 Score=104.14 Aligned_cols=60 Identities=15% Similarity=0.265 Sum_probs=57.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++||++|+++|+++||+|+++.|+|.++|+++++ +|+.|++|++|.+..+++.+.|++.+
T Consensus 55 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~--~~~~v~~~~~~~~~~~~rd~~v~~~l 114 (440)
T 2e0i_A 55 INSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN--KVDAIYVNEDYTPFSISRDEKIRKVC 114 (440)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT--TCSEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc--CCCEEEEecccChHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999 99999999999999999999988754
No 11
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=98.77 E-value=9.5e-09 Score=86.44 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++||++|+++|+++||+|+++.|+|.++|++++++++|+.|++|++|++..+++.+.|++.+
T Consensus 64 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l 125 (489)
T 1np7_A 64 QQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQL 125 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999988744
No 12
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=98.72 E-value=1.7e-08 Score=85.83 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=59.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
+++|++|+++|+++|++|+++.|+|.++|++++++++|+.|++|++|.+..+.|.+.|++.+
T Consensus 99 ~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~p~~~~rd~~v~~~l 160 (525)
T 2j4d_A 99 MECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGL 160 (525)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCSEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999987643
No 13
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=96.22 E-value=0.0082 Score=51.24 Aligned_cols=45 Identities=4% Similarity=-0.030 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEe-------CCcchHHHHHHHHcCcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLI-------GGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~-------G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
..+|+.++++|+++|.+++++. |++.+.|++++++++|+.|+++.
T Consensus 66 ~saMr~fa~~L~~~G~~v~y~~~~~~~~~g~~~~~L~~l~~~~~~~~v~~~~ 117 (522)
T 3zxs_A 66 LAAMRKFARRLQERGFRVAYSRLDDPDTGPSIGAELLRRAAETGAREAVATR 117 (522)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTCTTCCSSHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCeEEEEeccCccccCCHHHHHHHHHHHcCCCEEEEeC
Confidence 4689999999999999999988 89999999999999999999993
No 14
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=94.65 E-value=0.14 Score=35.69 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=38.0
Q ss_pred hhHHHHHHHHhhcCCc---EEEEeCCcchHHHHHHHHcCcceEEECCCCC
Q psy15173 4 LGLKEVHEDCKKLNIE---FHFLIGGAHEILPQFVEKHKLGAVVIDFMPL 50 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~---l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~yl 50 (131)
+-|.++.+.+.+.|++ ..+..|+|.+.|.+++++.+++.||.-..-.
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCC
Confidence 3466777778888887 5567899999999999999999999876533
No 15
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=93.88 E-value=0.018 Score=48.77 Aligned_cols=50 Identities=12% Similarity=-0.009 Sum_probs=35.5
Q ss_pred HHHHHHHhhC--CCChhhHHHHHHHHHHHHhhcchhcc-ccCCCCcccchHHHH
Q psy15173 73 RAVLEVRRVL--PKHSKAVDSFCEEAIVRRELADNFCY-YNKNYDKVEGAFDWA 123 (131)
Q Consensus 73 r~al~v~~~~--~~~~~~~~~fleElivrRELa~Nfc~-yn~~YDs~~~~p~WA 123 (131)
+|+.++.++. .....+++.|+.|| +|||...++++ |.|.|++..|++.|+
T Consensus 301 ~v~~~~~~~~~~~~~~~~~~~f~~EL-~WREf~~~~~~~~~~~~~~~~~~~~~~ 353 (525)
T 2j4d_A 301 FIYEEVQRYEKERVANNSTYWVLFEL-IWRDYFRFLSIKCGNSLFHLGGPRNVQ 353 (525)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHH-HHHHHHHHHHHHHGGGGTSTTTTTTCC
T ss_pred HHHHHHHHHhhcccccccHHHHHHHH-HHHHHHHHHHHHcCchhhhccCchhhc
Confidence 6776665431 12335688899998 79998888865 668898888877543
No 16
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=93.72 E-value=0.15 Score=34.13 Aligned_cols=46 Identities=15% Similarity=0.115 Sum_probs=37.2
Q ss_pred hhHHHHHHHHhhcCCcE-----EEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEF-----HFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l-----~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
+-|.++.+.+++.|++. .+..|+|.+.|.+++++.+++.||.-...
T Consensus 70 ~~l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 70 EIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 34667777888888654 55789999999999999999999997643
No 17
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=92.35 E-value=0.28 Score=33.48 Aligned_cols=43 Identities=9% Similarity=0.335 Sum_probs=34.6
Q ss_pred HHHHHHHHhhcCCcE--EEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 6 LKEVHEDCKKLNIEF--HFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 6 L~el~~~L~~~gI~l--~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
|.++.+.+...|++. .+..|+|.+.|.+++++.+++.||.-..
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~ 129 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSH 129 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCC
Confidence 555666677778874 4568999999999999999999998755
No 18
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=92.00 E-value=0.045 Score=45.65 Aligned_cols=41 Identities=15% Similarity=-0.031 Sum_probs=31.0
Q ss_pred HHHHHHHhhC--CCChhhHHHHHHHHHHHHhhcchhccccCCCC
Q psy15173 73 RAVLEVRRVL--PKHSKAVDSFCEEAIVRRELADNFCYYNKNYD 114 (131)
Q Consensus 73 r~al~v~~~~--~~~~~~~~~fleElivrRELa~Nfc~yn~~YD 114 (131)
+|+.++.++. .....+++.|+.|| +|||...++++++|+|+
T Consensus 265 ~v~~~~~~~~~~~~~~~~~~~f~~eL-~WRef~~~~~~~~p~~~ 307 (489)
T 1np7_A 265 FIYQEVKRYEQERVSNDSTHWLIFEL-LWRDFFRFVAQKYGNKL 307 (489)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHH-HHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHhhcccccchHHHHHHHH-HHHHHHHHHHHHCcchh
Confidence 7777765431 12335688899999 99999999999999886
No 19
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=91.79 E-value=0.42 Score=31.70 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=36.8
Q ss_pred hhHHHHHHHHhhcCCc-----EEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIE-----FHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~-----l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
+.+..+++.+++.|++ ..+..|+|.+.|.+++++.+++.||.-..
T Consensus 66 ~~~~~l~~~~~~~~~~~~~v~~~~~~g~~~~~I~~~a~~~~~dliV~G~~ 115 (143)
T 3fdx_A 66 GSETQLKEIAKKFSIPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASH 115 (143)
T ss_dssp HHHHHHHHHHTTSCCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHHHHHcCCCCCceEEEEEecChHHHHHHHHHHhCCCEEEEeCC
Confidence 4456677777777763 55678999999999999999999999876
No 20
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=91.52 E-value=0.29 Score=37.56 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=44.2
Q ss_pred HHHHHHHHhhcCCcEEEEe--CC---cchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCC
Q psy15173 6 LKEVHEDCKKLNIEFHFLI--GG---AHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLP 65 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~--G~---p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~ 65 (131)
+..++...+.+|||+++.. |+ -.+.+.++.++.++..|++..-....+|.|+++++..+.
T Consensus 52 ~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~g 116 (237)
T 3rjz_A 52 ANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELG 116 (237)
T ss_dssp SSHHHHHHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcC
Confidence 4456667788999999864 43 234566777778999999999999999999999998885
No 21
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=91.51 E-value=0.35 Score=33.37 Aligned_cols=45 Identities=16% Similarity=-0.039 Sum_probs=37.3
Q ss_pred hhHHHHHHHHhhcCCcEEE----EeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHF----LIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l----~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
+-|.++.+.+++.|++..+ ..|+|.+.|.+++++.+++.||.-..
T Consensus 78 ~~l~~~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 78 ETLSWAVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 4577788888888988653 35999999999999999999998754
No 22
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=91.49 E-value=0.31 Score=32.49 Aligned_cols=45 Identities=4% Similarity=0.067 Sum_probs=36.7
Q ss_pred hhHHHHHHHHhhcCC---cEEEEeCCcchHHHH-HHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNI---EFHFLIGGAHEILPQ-FVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI---~l~l~~G~p~~~l~~-l~~~~~a~~Vv~d~~ 48 (131)
+-|.++.+.+.+.|+ ...+..|+|.+.|.+ ++++.+++.||.-..
T Consensus 69 ~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~ 117 (146)
T 3s3t_A 69 DAMRQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGAT 117 (146)
T ss_dssp HHHHHHHHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESC
T ss_pred HHHHHHHHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCC
Confidence 346677777878777 456678999999999 999999999998754
No 23
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=90.77 E-value=0.97 Score=33.93 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=37.9
Q ss_pred hhHHHHHHHHhhcCCc--EEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIE--FHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~--l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
+.+.++.+.|++.|++ ..+..|++.+.|.+++++.+++.||.-..
T Consensus 214 ~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dLlV~G~~ 260 (294)
T 3loq_A 214 ADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINATTIFMGSR 260 (294)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCcCEEEEeCC
Confidence 4678888999999987 44467999999999999999999988654
No 24
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=90.39 E-value=0.42 Score=32.89 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=35.0
Q ss_pred hHHHHHHHHhhcCCcE----EEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 5 GLKEVHEDCKKLNIEF----HFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 5 gL~el~~~L~~~gI~l----~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
-|.++.+.+...|++. .+..|+|.+.|.+++++.+++.||.-..
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~ 126 (170)
T 2dum_A 79 KLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSR 126 (170)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCC
Confidence 3556666666677764 5568999999999999999999998765
No 25
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=90.26 E-value=0.57 Score=31.01 Aligned_cols=43 Identities=12% Similarity=0.136 Sum_probs=33.8
Q ss_pred HHHHHHHHhhcCCcE---EEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 6 LKEVHEDCKKLNIEF---HFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 6 L~el~~~L~~~gI~l---~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
...+++-+++.|++. .+..|+|.+.|.+++++.+++.||.-..
T Consensus 66 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 66 QKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHHHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC
Confidence 344555555667763 5678999999999999999999998876
No 26
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=89.92 E-value=0.63 Score=32.20 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=34.7
Q ss_pred hHHHHHHHHhhcCCcE--EEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 5 GLKEVHEDCKKLNIEF--HFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 5 gL~el~~~L~~~gI~l--~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
-|.++.+.+...|++. .+..|+|.+.|.+++++.+++.||.-..
T Consensus 88 ~l~~~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~ 133 (175)
T 2gm3_A 88 LLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSR 133 (175)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEEC
T ss_pred HHHHHHHHHHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCC
Confidence 3455555667778765 4568999999999999999999998765
No 27
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=89.69 E-value=0.56 Score=31.78 Aligned_cols=45 Identities=9% Similarity=0.068 Sum_probs=36.3
Q ss_pred hhHHHHHHHHhhcCCc-E--EEEe-CCcchHHHHH-HHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIE-F--HFLI-GGAHEILPQF-VEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~-l--~l~~-G~p~~~l~~l-~~~~~a~~Vv~d~~ 48 (131)
+-|.++.+.+++.|++ . .+.. |+|.+.|.++ +++.+++.||.-..
T Consensus 79 ~~l~~~~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~ 128 (156)
T 3fg9_A 79 DVVAEYVQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGAD 128 (156)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCC
Confidence 4566777778888883 3 5567 9999999999 99999999998765
No 28
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=89.52 E-value=0.85 Score=30.47 Aligned_cols=40 Identities=15% Similarity=0.256 Sum_probs=31.3
Q ss_pred HHHHHhhcCCc---EEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 9 VHEDCKKLNIE---FHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 9 l~~~L~~~gI~---l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
+++-+++.|++ ..+..|+|.+.|.+++++.+++.||.-..
T Consensus 76 l~~~~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~ 118 (150)
T 3tnj_A 76 LSQIGNTLGIDPAHRWLVWGEPREEIIRIAEQENVDLIVVGSH 118 (150)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHcCCCcceEEEecCCHHHHHHHHHHHcCCCEEEEecC
Confidence 33334445655 67788999999999999999999998754
No 29
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=89.11 E-value=0.81 Score=30.14 Aligned_cols=44 Identities=11% Similarity=0.056 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhcCCc--EEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIE--FHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~--l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
+-|.++.+.+.+.|++ ..+..|+|.+.|.++++ +++.||.....
T Consensus 66 ~~l~~~~~~~~~~g~~~~~~v~~g~~~~~I~~~a~--~~dliV~G~~~ 111 (138)
T 3idf_A 66 LLTQKFSTFFTEKGINPFVVIKEGEPVEMVLEEAK--DYNLLIIGSSE 111 (138)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEESCHHHHHHHHHT--TCSEEEEECCT
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCChHHHHHHHHh--cCCEEEEeCCC
Confidence 4466777788878877 55678999999999999 99999987653
No 30
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=88.63 E-value=0.86 Score=30.08 Aligned_cols=44 Identities=23% Similarity=0.263 Sum_probs=33.3
Q ss_pred CcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCC
Q psy15173 18 IEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLP 65 (131)
Q Consensus 18 I~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~ 65 (131)
+...+..|+|.+.|.+++++.+++.||.-..-. .-.+.|....+
T Consensus 88 ~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~g~----sv~~~vl~~a~ 131 (138)
T 1q77_A 88 PGVEYRIGPLSEEVKKFVEGKGYELVVWACYPS----AYLCKVIDGLN 131 (138)
T ss_dssp CCEEEECSCHHHHHHHHHTTSCCSEEEECSCCG----GGTHHHHHHSS
T ss_pred ceEEEEcCCHHHHHHHHHHhcCCCEEEEeCCCC----chHHHHHHhCC
Confidence 667778899999999999999999999976532 33444555554
No 31
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=87.61 E-value=1.4 Score=31.18 Aligned_cols=44 Identities=2% Similarity=-0.044 Sum_probs=38.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
..|..++=+.|++.|+++.+..|.+...+..+++..++..++.+
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~ 137 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT 137 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc
Confidence 46888889999999999999999999999999999999866543
No 32
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=85.18 E-value=1.5 Score=28.80 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=28.8
Q ss_pred cCC---cEEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 16 LNI---EFHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 16 ~gI---~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
.|+ ...+..|+|.+.|.+++++.+++.||.-..-
T Consensus 73 ~g~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~ 109 (137)
T 2z08_A 73 TGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRG 109 (137)
T ss_dssp HCCCGGGEEEEESSHHHHHHHHHHHTTCSEEEEESSC
T ss_pred cCCCccEEEEEecCHHHHHHHHHHHcCCCEEEECCCC
Confidence 566 5667789999999999999999999987553
No 33
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=82.47 E-value=4 Score=30.63 Aligned_cols=56 Identities=21% Similarity=0.305 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcCC---cEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHH
Q psy15173 6 LKEVHEDCKKLNI---EFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLK 61 (131)
Q Consensus 6 L~el~~~L~~~gI---~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~ 61 (131)
...++.-+++.|+ ...+..|+|.+.|.+++++.+++.||.-.. -....+-+...++
T Consensus 230 ~~~l~~~~~~~~~~~~~~~v~~g~~~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~ 289 (319)
T 3olq_A 230 LIAMKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTA 289 (319)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccEEEecCCcHHHHHHHHHHhCCCEEEEeccCccCCccccccHHH
Confidence 3344555567776 477789999999999999999999988763 3344444444443
No 34
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=80.56 E-value=4.5 Score=30.17 Aligned_cols=60 Identities=10% Similarity=0.065 Sum_probs=43.5
Q ss_pred hhHHHHHHHHhhcCCcEEE---E-eCCcchHHHHHHHHcCcceEEECCCCCchhhhH-----HHHHHhhCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHF---L-IGGAHEILPQFVEKHKLGAVVIDFMPLREHMGW-----ADTLKKDLP 65 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l---~-~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w-----~~~v~~~l~ 65 (131)
+-|.++.+.+++.|++... . .|+|.+.| ++++.+++.||.........+.+ ...|....+
T Consensus 86 ~~l~~~~~~~~~~g~~~~~~~v~~~g~~~~~I--~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~ 154 (294)
T 3loq_A 86 EVLPEVAQKIEAAGIKAEVIKPFPAGDPVVEI--IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK 154 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSCCEECHHHHH--HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCcceeEeeccCChhHhe--eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC
Confidence 4567777888888998775 4 79999988 99999999999987544332322 344556565
No 35
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=79.96 E-value=3.2 Score=30.96 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=32.4
Q ss_pred HHHHHHHhhcCC---cEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 7 KEVHEDCKKLNI---EFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 7 ~el~~~L~~~gI---~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
..+++-+++.|+ ...+..|+|.+.|.+++++.+++.||.-..
T Consensus 202 ~~l~~~~~~~g~~~~~~~v~~g~~~~~I~~~a~~~~~dLiVmG~~ 246 (290)
T 3mt0_A 202 EACRTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTV 246 (290)
T ss_dssp HHHHHHHHHHTCCTTTEEEEESCHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHcCCCcceEEEeccCHHHHHHHHHHhcCCCEEEECCC
Confidence 334444455576 467789999999999999999999998654
No 36
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=78.38 E-value=2.8 Score=31.64 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce----EEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA----VVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~----Vv~d~ 47 (131)
..|..++-+.|++.|++++++.|+....+..++++.+... |++|.
T Consensus 143 ~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~ 191 (297)
T 4fe3_A 143 KEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNF 191 (297)
T ss_dssp CBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEEC
T ss_pred CCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeee
Confidence 3578899999999999999999999999999999988653 55544
No 37
>1ul1_X Flap endonuclease-1; protein complex, DNA-binding protein, flap DNA, flap endonuclease, sliding clamp, DNA clamp; 2.90A {Homo sapiens} SCOP: a.60.7.1 c.120.1.2
Probab=78.20 E-value=2.9 Score=33.68 Aligned_cols=43 Identities=14% Similarity=0.025 Sum_probs=35.6
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
.-+..+.+-|+..|||++...|.+.+.+..|++.-.+..|+++
T Consensus 135 ~~~~~~~~lL~~~Gi~~i~apgEADd~iA~La~~g~~~~iiS~ 177 (379)
T 1ul1_X 135 QHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATE 177 (379)
T ss_dssp SCHHHHHHHHHHHTCCEEECSSCHHHHHHHHHHHTSSSEEECS
T ss_pred HHHHHHHHHHHHcCCCeecCCCcHHHHHHHHHhcCCeEEEEec
Confidence 3467788999999999999999888999999988666666554
No 38
>3q8k_A Flap endonuclease 1; helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase-DNA complex, DNA repair, replication; HET: DNA; 2.20A {Homo sapiens} PDB: 3q8l_A* 3q8m_A*
Probab=77.64 E-value=3.4 Score=32.92 Aligned_cols=44 Identities=14% Similarity=0.036 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
.+-+..+.+-|+.+|||++...|.+.+++..+++.-.+..|+++
T Consensus 134 ~~q~~~~~~lL~~~gip~i~ap~EADd~ia~La~~g~v~~i~s~ 177 (341)
T 3q8k_A 134 KQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATE 177 (341)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSSCHHHHHHHHHHTTSSSEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEECCccHHHHHHHHHhcCCeEEEEcC
Confidence 34567788899999999999999888888999987555555553
No 39
>1a76_A Flap endonuclease-1 protein; 5'-3' EXO/endo nuclease, DNA replication, RTH, RAD27, DNA repair; 2.00A {Methanocaldococcus jannaschii} SCOP: a.60.7.1 c.120.1.2 PDB: 1a77_A
Probab=76.69 E-value=3.7 Score=32.26 Aligned_cols=42 Identities=12% Similarity=0.005 Sum_probs=35.8
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
-+..+.+-|+..|||++...|.+.+.+..++++-.+..|+++
T Consensus 131 ~~~~~~~lL~~~gi~~i~apgEAD~~ia~La~~g~~~~I~S~ 172 (326)
T 1a76_A 131 MVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQ 172 (326)
T ss_dssp HHHHHHHHHHHHTCCEEECSSCHHHHHHHHHHTTSSSEEECS
T ss_pred HHHHHHHHHHHcCCCeEECCccHHHHHHHHHHCCCEEEEecC
Confidence 577889999999999999999888899999987556777774
No 40
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=76.65 E-value=7 Score=27.18 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=39.3
Q ss_pred HHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 10 HEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 10 ~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
=+.|+++|+++.+..|++...+..+++..++. ++... .........+.+.+
T Consensus 48 l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~~---~~k~~~l~~~~~~~ 98 (176)
T 3mmz_A 48 IAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHGI---DRKDLALKQWCEEQ 98 (176)
T ss_dssp HHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEESC---SCHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeCC---CChHHHHHHHHHHc
Confidence 45788899999999999999999999999999 66654 34445555555554
No 41
>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication, transferase; 2.00A {Pyrococcus furiosus} SCOP: a.60.7.1 c.120.1.2 PDB: 1mc8_A
Probab=75.96 E-value=4 Score=32.26 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=36.4
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
.-+..+.+-|+.+|||++...+.+...+..++++-.+..|+++
T Consensus 130 ~~~~~~~~lL~~~gip~i~ap~EADa~iA~La~~g~~~~i~S~ 172 (340)
T 1b43_A 130 MLIEDAKKLLELMGIPIVQAPSEGEAQAAYMAAKGSVYASASQ 172 (340)
T ss_dssp HHHHHHHHHHHHHTCCEEECSSCHHHHHHHHHHHTSSSEEECS
T ss_pred HHHHHHHHHHHHcCCcEEEcChhHHHHHHHHHHcCCEEEEEcc
Confidence 3466788899999999999999999999999987677777775
No 42
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=75.33 E-value=5.1 Score=34.43 Aligned_cols=59 Identities=14% Similarity=0.237 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhh
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKD 63 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~ 63 (131)
.+..+.=+.|++.||...+..||+......++++.+++.++.+-.|. .+....+.+.+.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~-~K~~~v~~l~~~ 518 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPH-QKSEEVKKLQAK 518 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTT-CHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCCHH-hHHHHHHHHhhC
Confidence 45677778899999999999999999999999999999999998876 344444444443
No 43
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=74.66 E-value=14 Score=25.55 Aligned_cols=46 Identities=17% Similarity=0.217 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcc---hHHHHHHHHcCc----ceEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAH---EILPQFVEKHKL----GAVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~---~~l~~l~~~~~a----~~Vv~d~~ 48 (131)
..|+.++=+.|++.|+++.+..+.+. ..+..+.+..+. +.|++..+
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~ 88 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNS 88 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCT
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccc
Confidence 35788888999999999999987765 778888888886 46676653
No 44
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=74.65 E-value=13 Score=28.62 Aligned_cols=47 Identities=17% Similarity=0.149 Sum_probs=38.0
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceEEECCC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
|-+-|.++.+.+++.||+.++... .+...+..++++.++..++.|--
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 556789999999999999988754 44566778899999999888754
No 45
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=74.31 E-value=4 Score=31.94 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=35.7
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceEEEC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~Vv~d 46 (131)
|-+-|.++.+.+++.||+.++..- .+...+..++++.++..++.|
T Consensus 224 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 224 SAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp CHHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 456789999999999999888643 445667888999999877665
No 46
>3ory_A Flap endonuclease 1; hydrolase; 2.00A {Desulfurococcus amylolyticus}
Probab=73.68 E-value=4.8 Score=32.40 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.0
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEE
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~ 45 (131)
+..+.+-|+.+|||++...|.+...+..++++-.+..|++
T Consensus 146 ~~~i~~lL~~~GIp~i~apgEADaqiA~La~~g~~~~I~S 185 (363)
T 3ory_A 146 VRDAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDAYASAS 185 (363)
T ss_dssp HHHHHHHHHHHTCCEEECSSCHHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHHCCCCEEEeCccHHHHHHHHHHCCCeEEEEC
Confidence 7888999999999999999988888888887655667776
No 47
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=73.06 E-value=3.5 Score=33.26 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+++|=+.|++.|++.++..|.+.+.+..++++.+.
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 57899999999999999999999999999999998653
No 48
>2izo_A FEN1, flap structure-specific endonuclease; hydrolase, DNA repair, DNA-binding, endonuclease, metal-BIND excision repair, DNA replication, PCNA; HET: DNA; 2.9A {Sulfolobus solfataricus}
Probab=72.86 E-value=5 Score=31.83 Aligned_cols=43 Identities=7% Similarity=-0.082 Sum_probs=35.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
.-+..+.+-|+..|||++...|.+...+..++++-.+..|+++
T Consensus 127 ~~~~~~~~lL~~~gi~~i~ap~EADa~ia~La~~g~~~~I~S~ 169 (346)
T 2izo_A 127 IMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQ 169 (346)
T ss_dssp HHHHHHHHHHHHHTCCEEECSSCHHHHHHHHHHTTSSSEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEcCCcHHHHHHHHHhCCCeEEEECC
Confidence 4567788899999999999999888888888886456667664
No 49
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=72.78 E-value=12 Score=25.35 Aligned_cols=62 Identities=6% Similarity=0.059 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcc---------------hHHHHHHHHcC--cceEEE------C-CCCCchhhhHHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAH---------------EILPQFVEKHK--LGAVVI------D-FMPLREHMGWAD 58 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~---------------~~l~~l~~~~~--a~~Vv~------d-~~ylr~~r~w~~ 58 (131)
..|..++=+.|++.|+++.+..+.+. +.+....+..+ ...++. + ..+.++...-..
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~ 108 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYR 108 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHH
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHH
Confidence 35788888999999999999988765 55677777888 888773 2 123344444555
Q ss_pred HHHhhC
Q psy15173 59 TLKKDL 64 (131)
Q Consensus 59 ~v~~~l 64 (131)
.+.+.+
T Consensus 109 ~~~~~~ 114 (179)
T 3l8h_A 109 DIARRY 114 (179)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 555544
No 50
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=72.18 E-value=8.6 Score=27.99 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=40.9
Q ss_pred HHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 10 HEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 10 ~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
=+.|+++|+++.+..|++...+..++++.++..++... .........+.+.+
T Consensus 85 L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---k~K~~~l~~~~~~l 136 (211)
T 3ij5_A 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---SDKLVAYHELLATL 136 (211)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---SSHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---CChHHHHHHHHHHc
Confidence 46788999999999999999999999999999888766 34445555555554
No 51
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=72.09 E-value=11 Score=25.23 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=39.8
Q ss_pred HHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 10 HEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 10 ~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
=+.|++.|+++.+..|.+...+..++++.+...++... .........+.+.+
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~---kpk~~~~~~~~~~~ 91 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV---VDKLSAAEELCNEL 91 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC---SCHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc---CChHHHHHHHHHHc
Confidence 46678899999999999999999999999999877665 34444455555444
No 52
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=71.81 E-value=9.3 Score=26.83 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=40.4
Q ss_pred HHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 9 VHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 9 l~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
+=+.|+++|+++.+..|++...+..++++.++..++... .........+.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---EDKLVVLDKLLAEL 106 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---SCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---CChHHHHHHHHHHc
Confidence 346788899999999999999999999999998877665 33335555555554
No 53
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=71.41 E-value=11 Score=27.07 Aligned_cols=51 Identities=10% Similarity=0.122 Sum_probs=39.5
Q ss_pred HHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 11 EDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 11 ~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
+.|++.|+++.+..|++...+..++++.++..++... .........+.+.+
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~---k~k~~~~~~~~~~~ 112 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ---DDKVQAYYDICQKL 112 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC---SSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC---CCcHHHHHHHHHHh
Confidence 5678899999999999999999999999999887665 34444455555544
No 54
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=71.04 E-value=7.1 Score=33.94 Aligned_cols=58 Identities=14% Similarity=0.239 Sum_probs=46.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHh
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKK 62 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~ 62 (131)
.+..+.=+.|++.||..+++.||+......++++.++..++.+-.|. .+....+.+.+
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~-~K~~~v~~l~~ 595 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPH-QKSEEVKKLQA 595 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTT-CHHHHHHHHTT
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCCHH-HHHHHHHHHhc
Confidence 45567778899999999999999999999999999999999998875 34444444444
No 55
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=69.81 E-value=13 Score=24.87 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=39.9
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
..++=+.|++.|+++.+..|.+...+..+++..+....+... .........+.+.+
T Consensus 41 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~~---kp~~~~~~~~~~~~ 96 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTGS---YKKLEIYEKIKEKY 96 (162)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEECC-----CHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccCC---CCCHHHHHHHHHHc
Confidence 345667788899999999999999999999999988766542 23333444444444
No 56
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=69.53 E-value=9.1 Score=29.42 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=35.7
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceEEEC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~Vv~d 46 (131)
|-+-|.++.+.+++.||+.++... .+...+..++++.++..++.|
T Consensus 213 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 213 SPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 456789999999999999988754 345666788899999887765
No 57
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=69.29 E-value=8.2 Score=29.51 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=35.5
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceEEEC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~Vv~d 46 (131)
|-+.|.++.+.+++.||+.++... .+...+..++++.++..+..|
T Consensus 211 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 211 SPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 456788999999999999888753 445667788888999888775
No 58
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=69.12 E-value=9.8 Score=25.44 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
+..|.++.+++++.|+.++.+.-|..+.+.+++++++..--+
T Consensus 55 ~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 96 (163)
T 3gkn_A 55 GLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPL 96 (163)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceE
Confidence 457888999999999999888888888899999998876443
No 59
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=68.63 E-value=13 Score=25.67 Aligned_cols=44 Identities=9% Similarity=0.063 Sum_probs=32.4
Q ss_pred hhHHHHHHHHhhcCC-cEEEEeCCcchHHHHHHHHcCcc---eEEECC
Q psy15173 4 LGLKEVHEDCKKLNI-EFHFLIGGAHEILPQFVEKHKLG---AVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI-~l~l~~G~p~~~l~~l~~~~~a~---~Vv~d~ 47 (131)
..|.++.+++++.|+ .++.+.-+..+.+.+++++++.. -++.|.
T Consensus 53 p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~ 100 (167)
T 2wfc_A 53 PGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADP 100 (167)
T ss_dssp HHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECC
Confidence 456777778888888 88887777767788888888875 455553
No 60
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=68.35 E-value=15 Score=24.94 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHhhcCCc-EEEEeCCcchHHHHHHHHcCcc---eEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIE-FHFLIGGAHEILPQFVEKHKLG---AVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~-l~l~~G~p~~~l~~l~~~~~a~---~Vv~d~ 47 (131)
+..|.++.+++++.|+. ++.+.-+..+.+.+++++++.. -++.|.
T Consensus 56 ~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (162)
T 1tp9_A 56 VPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADG 104 (162)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECC
Confidence 35678888889889999 8888877778889999998883 245553
No 61
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=68.24 E-value=7.7 Score=26.87 Aligned_cols=54 Identities=15% Similarity=0.024 Sum_probs=39.7
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
++=+.|++.|+++.+..|.+...+..++++.+...++... .......+.+.+.+
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~~---k~k~~~~~~~~~~~ 95 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGK---LEKETACFDLMKQA 95 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEESC---SCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecCC---CCcHHHHHHHHHHc
Confidence 4556778899999999999999999999999998877543 33344444444443
No 62
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=67.82 E-value=12 Score=26.55 Aligned_cols=46 Identities=7% Similarity=0.050 Sum_probs=36.0
Q ss_pred hhhHHHHHHHHhhcCCc-EEEEeCCcchHHHHHHHHcCcc---eEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIE-FHFLIGGAHEILPQFVEKHKLG---AVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~-l~l~~G~p~~~l~~l~~~~~a~---~Vv~d~~ 48 (131)
+..|.++.++++++|+. ++.+..+......+++++++.. -++.|.+
T Consensus 77 ~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~ 126 (184)
T 3uma_A 77 LPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWN 126 (184)
T ss_dssp HHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCc
Confidence 34678888888999998 8878777777888999998886 5666643
No 63
>1rxw_A Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' FLA site, hydrolase-DNA complex; 2.00A {Archaeoglobus fulgidus} SCOP: a.60.7.1 c.120.1.2 PDB: 1rxv_A
Probab=66.96 E-value=9.3 Score=30.02 Aligned_cols=42 Identities=7% Similarity=-0.084 Sum_probs=33.4
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
-+..+.+-|+..|||++...|..+..+..++++-.+..|+++
T Consensus 130 ~~~~~~~lL~~~gi~~i~apgeAEA~lA~la~~g~~~~I~S~ 171 (336)
T 1rxw_A 130 IVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQ 171 (336)
T ss_dssp HHHHHHHHHHHTTCCEEECSSCHHHHHHHHHHTTSSSEEECS
T ss_pred HHHHHHHHHHhCCCCEEEcCchHHHHHHHHHHcCCeeEEEcC
Confidence 467788899999999999999867778888865456677764
No 64
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=66.94 E-value=17 Score=24.87 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=35.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCc--c---hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGA--H---EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p--~---~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++....|+++-+|. . ..++.+|+++++..++.+
T Consensus 27 ~G~~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 27 KGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp ESHHHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEES
T ss_pred ecHHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 588899999998889999987654 2 357899999999988776
No 65
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=66.69 E-value=15 Score=25.76 Aligned_cols=44 Identities=18% Similarity=0.125 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhhcCCcEEE-EeCCcchHHHHHHHHcCcc---eEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFHF-LIGGAHEILPQFVEKHKLG---AVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l-~~G~p~~~l~~l~~~~~a~---~Vv~d~ 47 (131)
..|.++.++++++|+.++. ...|......+++++++.. .++.|.
T Consensus 65 p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~ 112 (173)
T 3mng_A 65 PGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADP 112 (173)
T ss_dssp HHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECT
T ss_pred HHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECC
Confidence 4677888888999999884 7778778888999998875 455554
No 66
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=65.74 E-value=6.3 Score=34.56 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=45.0
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHh
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKK 62 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~ 62 (131)
.+..+.=+.|++.||..+++.||+......++++.++..++.+-.|.. +....+.+.+
T Consensus 557 ~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~P~~-K~~~v~~l~~ 614 (736)
T 3rfu_A 557 SSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPED-KSRIVSELKD 614 (736)
T ss_dssp SSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCCHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecCHHH-HHHHHHHHHh
Confidence 345666778899999999999999999999999999999998887642 3334444443
No 67
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=65.69 E-value=12 Score=25.14 Aligned_cols=43 Identities=23% Similarity=0.338 Sum_probs=33.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcch-----HHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHE-----ILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~-----~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.++.....|+++-+|..+ .++.+|+++++..++..
T Consensus 23 ~G~~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~ 70 (121)
T 2lbw_A 23 RGVKEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIP 70 (121)
T ss_dssp ESHHHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECC
T ss_pred ccHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEEC
Confidence 57888888888888888888665322 37888999998877765
No 68
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=65.68 E-value=13 Score=26.78 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=39.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
.|..++=+.|++.|+++.+..|++...+..+++..+....+..-.+
T Consensus 147 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~ 192 (280)
T 3skx_A 147 PESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLP 192 (280)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCG
T ss_pred HhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCH
Confidence 5778888899999999999999999989999999998877665543
No 69
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=65.41 E-value=12 Score=27.18 Aligned_cols=36 Identities=11% Similarity=0.097 Sum_probs=29.1
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~ 42 (131)
.+.=++|++.|+++++..|++...+..++++.+...
T Consensus 28 ~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence 344456778899999999999888999998887754
No 70
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=65.31 E-value=13 Score=27.72 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=39.4
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
.|..++=+.|++.|+++.+..|++...+..+++..+...++.+..|
T Consensus 166 ~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~ 211 (287)
T 3a1c_A 166 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP 211 (287)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh
Confidence 5777888889999999999999998888899999999888776654
No 71
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=65.09 E-value=9.7 Score=26.42 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
+..|.++.+++++.|+.++.+..|+.+.+.+++++++..--
T Consensus 71 l~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~ 111 (179)
T 3ixr_A 71 GLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFP 111 (179)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceE
Confidence 45688899999999999888888888889999999887643
No 72
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=65.04 E-value=20 Score=25.96 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHhhcCC-cEEEEeCCcchHHHHHHHHcCcc--eEEECC
Q psy15173 3 QLGLKEVHEDCKKLNI-EFHFLIGGAHEILPQFVEKHKLG--AVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI-~l~l~~G~p~~~l~~l~~~~~a~--~Vv~d~ 47 (131)
+.+|.++.+++++.|+ .++.+..++.+.+.+++++++.. -++.|.
T Consensus 54 ~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~ 101 (241)
T 1nm3_A 54 LPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDG 101 (241)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECC
Confidence 4567888888999999 88888878778889999988875 455554
No 73
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=64.31 E-value=7.5 Score=30.41 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=32.9
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcce
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGA 42 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~ 42 (131)
|-+-|.++.+.+++.||+.++... .+...+..++++.++..
T Consensus 224 s~~~l~~l~~~ik~~~v~~If~e~~~~~k~~~~ia~e~g~~v 265 (307)
T 3ujp_A 224 TPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARF 265 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHTTTTTCCEE
T ss_pred CHHHHHHHHHHHHhcCCcEEEEeCCCChHHHHHHHHHhCCce
Confidence 557789999999999999988754 34566788888888875
No 74
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=63.45 E-value=14 Score=27.56 Aligned_cols=61 Identities=11% Similarity=0.018 Sum_probs=41.1
Q ss_pred hHHHHHHHHhhcCCcEEE--E-eCCcchHHHHHHHHcCcceEEECCCCCch-----hhhHHHHHHhhCC
Q psy15173 5 GLKEVHEDCKKLNIEFHF--L-IGGAHEILPQFVEKHKLGAVVIDFMPLRE-----HMGWADTLKKDLP 65 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l--~-~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~-----~r~w~~~v~~~l~ 65 (131)
-|.++.+.+...|+++.. . .|+|.+.|.+.+++.+++.||........ .-.-...|....+
T Consensus 74 ~l~~~~~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~ 142 (319)
T 3olq_A 74 WIKQQARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP 142 (319)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS
T ss_pred HHHHHHHHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC
Confidence 455666666677887544 4 79999999999999999999986543221 1123445666665
No 75
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=62.71 E-value=9.7 Score=29.45 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
..|..++=+.|++.|+++.+..|.+...+..+++..+...++.+.
T Consensus 181 ~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~ 225 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNT 225 (317)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEC
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEE
Confidence 357888889999999999999999999999999999998777643
No 76
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=62.70 E-value=4.3 Score=34.54 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=20.4
Q ss_pred ChhhHHHHHHHHHHHHhhcchhcccc-CCC
Q psy15173 85 HSKAVDSFCEEAIVRRELADNFCYYN-KNY 113 (131)
Q Consensus 85 ~~~~~~~fleElivrRELa~Nfc~yn-~~Y 113 (131)
...+++.|+.|||.|||.....-++. |+|
T Consensus 306 ~~~~~e~firellgWREF~~~l~~~~~P~~ 335 (522)
T 3zxs_A 306 PLNAVEGFIRQILGWREYVRGIWTLSGPDY 335 (522)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHGGGG
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 34578999999999999875533332 544
No 77
>3qe9_Y Exonuclease 1; exonuclease, hydrolase-DNA complex; HET: DNA; 2.51A {Homo sapiens} PDB: 3qeb_Z* 3qea_Z*
Probab=62.42 E-value=9.5 Score=30.49 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=32.9
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEE
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~ 45 (131)
...+.+-|+.+|||++...+.+...+..|+++-.+..|++
T Consensus 130 ~~~i~~~L~~~gIp~i~ap~EADaqiA~La~~g~~~~I~S 169 (352)
T 3qe9_Y 130 AHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIIT 169 (352)
T ss_dssp HHHHHHHHHHTTCEEEECSSCHHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHHcCCcEEECCcchHHHHHHHHHCCCeEEEEe
Confidence 4577888999999999988888888899998755667775
No 78
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=62.05 E-value=15 Score=25.43 Aligned_cols=43 Identities=19% Similarity=0.242 Sum_probs=33.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc-----hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH-----EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~-----~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++....|+++-+|.. ..++.+|++.++..++..
T Consensus 35 ~G~~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 82 (134)
T 2ale_A 35 KGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVP 82 (134)
T ss_dssp ESHHHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEES
T ss_pred cCchHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 4788888888888888888866432 247889999999877763
No 79
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=61.84 E-value=21 Score=25.09 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=33.5
Q ss_pred HHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 10 HEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 10 ~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
=+.|++.|+++.++.|++...+..++++.++..++...-
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~k 93 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQV 93 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSCS
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCCC
Confidence 456788999999999999999999999999998777653
No 80
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=61.33 E-value=17 Score=26.92 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEE---eCCcchHHHHHHHHcCcceEEECCCCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFL---IGGAHEILPQFVEKHKLGAVVIDFMPL 50 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~---~G~p~~~l~~l~~~~~a~~Vv~d~~yl 50 (131)
.+-|.++.+.+...|+++... .|+|.+.|.+.+++.+++.||......
T Consensus 50 ~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~ 100 (290)
T 3mt0_A 50 SAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPD 100 (290)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccC
Confidence 345778888888888886653 478999999999999999999876543
No 81
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=61.06 E-value=27 Score=25.03 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHhhcCC-cEEEEeCCcchHHHHHHHHcCcc---eEEECC
Q psy15173 3 QLGLKEVHEDCKKLNI-EFHFLIGGAHEILPQFVEKHKLG---AVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI-~l~l~~G~p~~~l~~l~~~~~a~---~Vv~d~ 47 (131)
+.++.+...+++++|+ .++.+.-|......+|+++.+.. .++.|.
T Consensus 68 l~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~ 116 (176)
T 4f82_A 68 VPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADG 116 (176)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcC
Confidence 4567888888888998 78878777777888899888876 455553
No 82
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=60.82 E-value=18 Score=27.85 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=34.2
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceE
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~V 43 (131)
|-+.|.++.+.+++.||+.++... .+...+..++++.++..+
T Consensus 217 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 217 TPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp CHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHhCCcEE
Confidence 557789999999999999888754 345667888999999987
No 83
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=60.70 E-value=11 Score=28.81 Aligned_cols=45 Identities=16% Similarity=0.036 Sum_probs=33.3
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeCC----cchHHHHHHHHcCcceEEEC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIGG----AHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G~----p~~~l~~l~~~~~a~~Vv~d 46 (131)
|.+.|.++.+.+++.||+.++.... ..+.|.+.+++.|+..++.+
T Consensus 197 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~l~~~a~~~g~~v~~l~ 245 (282)
T 3mfq_A 197 ANSDMIETVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKGGQVEVVT 245 (282)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECBTTSCTHHHHHHHHHHHTTSCCCEEET
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHHhcCCceEEec
Confidence 5567899999999999998886432 23455566788898887754
No 84
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=60.40 E-value=11 Score=25.98 Aligned_cols=43 Identities=19% Similarity=0.140 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~ 45 (131)
..|+.++=+.|++.|+++.+..+.+...+..+.+..+....+.
T Consensus 77 ~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~ 119 (217)
T 3m1y_A 77 FEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS 119 (217)
T ss_dssp CBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc
Confidence 3578888899999999999999988888888888888775543
No 85
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=59.86 E-value=7.6 Score=24.73 Aligned_cols=43 Identities=9% Similarity=0.097 Sum_probs=30.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC----cceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK----LGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~----a~~Vv~d 46 (131)
.|+.++=+.|++.|+++.+..+.+...+..+.+..+ .+.|++.
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~ 67 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLS 67 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEH
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEe
Confidence 567888888999999999998877665555555443 3455543
No 86
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=59.17 E-value=12 Score=26.19 Aligned_cols=39 Identities=18% Similarity=0.391 Sum_probs=34.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|..++=+.|++.|+++.+..+.+...+..+.+..+..
T Consensus 88 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 357888889999999999999999888888888988886
No 87
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=59.13 E-value=11 Score=26.03 Aligned_cols=39 Identities=18% Similarity=-0.004 Sum_probs=32.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCc-chHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGA-HEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p-~~~l~~l~~~~~a~ 41 (131)
..|..++=+.|++.|+++.+..|.+ ...+..+.+..+..
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3577888888999999999999988 57788888888875
No 88
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=58.74 E-value=26 Score=24.28 Aligned_cols=39 Identities=8% Similarity=0.037 Sum_probs=32.7
Q ss_pred HHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 10 HEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 10 ~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
=+.|++.|+++.+..|.+...+..+++..+...++...-
T Consensus 62 l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~~k 100 (188)
T 2r8e_A 62 IRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQS 100 (188)
T ss_dssp HHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCS
T ss_pred HHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecCCC
Confidence 456788999999999999888999999999988776543
No 89
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=58.66 E-value=13 Score=29.39 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
..|..++=+.|++.|+++.+..|.+...+..+++..+...++.+
T Consensus 258 ~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~ 301 (415)
T 3p96_A 258 MPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN 301 (415)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee
Confidence 45788899999999999999999998889999999999887654
No 90
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=58.16 E-value=19 Score=24.13 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~ 45 (131)
+..|.++.+++.+.|+.++.+.-|..+.+.+++++++..--+.
T Consensus 49 ~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 91 (161)
T 3drn_A 49 ASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILV 91 (161)
T ss_dssp HHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEE
Confidence 3568888899999999988888788888999999988774433
No 91
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=57.46 E-value=18 Score=27.54 Aligned_cols=58 Identities=10% Similarity=0.154 Sum_probs=39.4
Q ss_pred hhHHHHHHHHhhc----------CCcEEEEeCCcchHHHHHHHHcCcce--------------EEECCCCCchhhhHHHH
Q psy15173 4 LGLKEVHEDCKKL----------NIEFHFLIGGAHEILPQFVEKHKLGA--------------VVIDFMPLREHMGWADT 59 (131)
Q Consensus 4 ~gL~el~~~L~~~----------gI~l~l~~G~p~~~l~~l~~~~~a~~--------------Vv~d~~ylr~~r~w~~~ 59 (131)
+.+..+.+.+.+- |+++++..|++...+..++++.+.+. |++|.+-+-....-...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~~~~~~~~~i~~~~~viFD~DgTLi~~~~~~~ 126 (335)
T 3n28_A 47 AQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDSTAIQIECIDE 126 (335)
T ss_dssp HHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEEEECTTCCCTTSCCEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCEEEccCcccccCCCEEEEcCCCCCcChHHHHH
Confidence 4455666666433 89999999999889999999887754 67777655444333333
Q ss_pred HH
Q psy15173 60 LK 61 (131)
Q Consensus 60 v~ 61 (131)
++
T Consensus 127 ~~ 128 (335)
T 3n28_A 127 IA 128 (335)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 92
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=56.95 E-value=30 Score=23.82 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=30.3
Q ss_pred hhHHHHHHHHhhcCCc-EEEEeCCcchHHHHHHHHcCcc---eEEECC
Q psy15173 4 LGLKEVHEDCKKLNIE-FHFLIGGAHEILPQFVEKHKLG---AVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~-l~l~~G~p~~~l~~l~~~~~a~---~Vv~d~ 47 (131)
..|.++.++++++|+. ++.+.-+..+.+.++++++++. -++.|.
T Consensus 65 p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~ 112 (171)
T 2pwj_A 65 PPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDF 112 (171)
T ss_dssp HHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECC
Confidence 4566777778888888 7777666666777888887752 355554
No 93
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=56.88 E-value=15 Score=24.80 Aligned_cols=39 Identities=26% Similarity=0.420 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|..++-+.|++.|+++.+..+.+...+..+++..+..
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 357888889999999999999998888888888888873
No 94
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=56.69 E-value=32 Score=22.84 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
+..|.++.+++++.| .++.+..+..+.+.+++++++..--+
T Consensus 55 ~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~ 95 (159)
T 2a4v_A 55 ASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHL 95 (159)
T ss_dssp HHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceE
Confidence 346778888888888 77777777777888999988876433
No 95
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=56.43 E-value=14 Score=28.11 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=37.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
..|..++-+.|++.|+++.+..|.+...+..+.++.+...++.+
T Consensus 180 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~ 223 (335)
T 3n28_A 180 MPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN 223 (335)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee
Confidence 35778888999999999999999998888899999998876553
No 96
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=56.19 E-value=14 Score=28.20 Aligned_cols=45 Identities=9% Similarity=0.051 Sum_probs=34.5
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceEEEC
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~Vv~d 46 (131)
|-+.|.++.+.+++.||+.++... .+...+..++++.++..+..|
T Consensus 208 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld 253 (284)
T 2prs_A 208 GAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLD 253 (284)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEec
Confidence 456788999999999999888753 345667778888888877653
No 97
>2iel_A Hypothetical protein TT0030; TT0030,thermus thermophilus, structural genomics, PSI, protein structure initiative; 1.60A {Thermus thermophilus} SCOP: c.26.2.4
Probab=55.66 E-value=20 Score=25.32 Aligned_cols=64 Identities=8% Similarity=0.043 Sum_probs=48.7
Q ss_pred hhHHHHHHHHhhcCCcEE---EEeCCcchHHHHHHHHcC--cceEEECCCCCch----hhhHHHHHHhhCCCCchH
Q psy15173 4 LGLKEVHEDCKKLNIEFH---FLIGGAHEILPQFVEKHK--LGAVVIDFMPLRE----HMGWADTLKKDLPKDVPL 70 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~---l~~G~p~~~l~~l~~~~~--a~~Vv~d~~ylr~----~r~w~~~v~~~l~~~~p~ 70 (131)
+.|...-+.|++.|++-. +..++|...|.+.+.+++ ++.||.--.|-.. .+.|..++.. +. +|+
T Consensus 58 ~~l~~sl~aL~~~G~~a~~G~v~d~~Pl~AL~~~v~~~~~~~deiIV~T~Ph~vs~~fh~DwasrAr~-~g--vPV 130 (138)
T 2iel_A 58 EEAAAAKRALEAQGIPVEEAKAGDISPLLAIEEELLAHPGAYQGIVLSTLPPGLSRWLRLDVHTQAER-FG--LPV 130 (138)
T ss_dssp HHHHHHHHHHHTTTCCCSEEEEEESSHHHHHHHHHHHSTTSCSEEEEEECCTTTCHHHHTTHHHHGGG-GS--SCE
T ss_pred HHHHHHHHHHHHcCCcccccccCCCChHHHHHHHHHhcCCCCceEEEEcCCchHHHHHhccHHHHHHh-cC--CCE
Confidence 456667778889999866 567889999999999999 9988887777655 5667776655 53 663
No 98
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=54.11 E-value=30 Score=24.57 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=33.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
.|+.++=+.|++.|+++.+..+.+...+..+++..+. +.+++..
T Consensus 117 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~ 164 (243)
T 2hsz_A 117 PNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQ 164 (243)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTT
T ss_pred CCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecc
Confidence 5677777888999999999888887777788887773 4555544
No 99
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=53.83 E-value=29 Score=21.58 Aligned_cols=43 Identities=12% Similarity=0.224 Sum_probs=34.9
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc----hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH----EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~----~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++....|+++-+|.. ..++.+|+++++..++.+
T Consensus 14 ~G~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 14 IGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp ESHHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EcHHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 4888999999998899999876643 346788999999988876
No 100
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=53.55 E-value=24 Score=27.59 Aligned_cols=42 Identities=14% Similarity=0.019 Sum_probs=33.9
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcceE
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~V 43 (131)
|-+-|.++.+.+++.||+.++... .+...+..++++.++..+
T Consensus 238 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~iA~e~g~~v~ 280 (321)
T 1xvl_A 238 TPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFG 280 (321)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCChHHHHHHHHhcCCcee
Confidence 456789999999999999988754 445667788999998875
No 101
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=52.98 E-value=17 Score=24.53 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=32.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
.|..++=+.|++.|+++.+..|.+...+..+.+..+...++
T Consensus 79 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~ 119 (211)
T 1l7m_A 79 EGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF 119 (211)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE
T ss_pred ccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE
Confidence 57788888999999999999888776666777777766543
No 102
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=52.02 E-value=24 Score=23.62 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+. +.+++..
T Consensus 86 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~ 134 (216)
T 2pib_A 86 NPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGD 134 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGG
T ss_pred CcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEeecc
Confidence 35778888899999999999998888878888887775 3455443
No 103
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=51.91 E-value=37 Score=24.22 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=28.9
Q ss_pred hhHHHHHHHH-hhcCCc-EEEEeCCcchHHHHHHHHcCcc--eEEEC
Q psy15173 4 LGLKEVHEDC-KKLNIE-FHFLIGGAHEILPQFVEKHKLG--AVVID 46 (131)
Q Consensus 4 ~gL~el~~~L-~~~gI~-l~l~~G~p~~~l~~l~~~~~a~--~Vv~d 46 (131)
.++++...++ +++|+. ++.+.-|......+|++++++. .++.|
T Consensus 65 ~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD 111 (182)
T 1xiy_A 65 PGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISD 111 (182)
T ss_dssp HHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEe
Confidence 4566666777 777875 6556777777777777777764 44555
No 104
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=51.87 E-value=29 Score=24.13 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc----Ccc-eEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH----KLG-AVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~----~a~-~Vv~d 46 (131)
+..|.++.+++++.|+.++.+..++.+.+.++++++ +.. -++.|
T Consensus 50 ~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D 98 (186)
T 1n8j_A 50 LGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGD 98 (186)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEEC
Confidence 356788888898899998888888888889999988 544 35566
No 105
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=51.46 E-value=22 Score=25.11 Aligned_cols=62 Identities=5% Similarity=-0.082 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC--CchhhhHHHHHHhhCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP--LREHMGWADTLKKDLP 65 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y--lr~~r~w~~~v~~~l~ 65 (131)
..|..++=+.|+++|+++.+..|.+...+..+.. ...+.|++..+. .++...-...+.+.+.
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~ 101 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVNDWMIAAPRPTAGWPQPDACWMALMALN 101 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTTTTCEECCCCSSCTTSTHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccCCEEEECCcCCCCCCChHHHHHHHHHcC
Confidence 4688899999999999999999988777766665 445677776543 3333344444455553
No 106
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=51.37 E-value=56 Score=22.43 Aligned_cols=61 Identities=2% Similarity=-0.052 Sum_probs=42.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECCCCCchhhhHHHHHHhhCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDFMPLREHMGWADTLKKDLP 65 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~~ylr~~r~w~~~v~~~l~ 65 (131)
.|..++=+.|++ |+++.+..+.+...+....+..+. +.|++.....++...-...+++.+.
T Consensus 87 ~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg 151 (210)
T 2ah5_A 87 PQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQ 151 (210)
T ss_dssp TTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcC
Confidence 578888888999 999988877776667777777665 3555543444556666666677664
No 107
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=50.94 E-value=25 Score=23.98 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.|+++.+..+.+...+..+.+..+.
T Consensus 72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 109 (205)
T 3m9l_A 72 APGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGL 109 (205)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCc
Confidence 35788888999999999999998888888888887776
No 108
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=50.83 E-value=19 Score=26.63 Aligned_cols=34 Identities=6% Similarity=-0.033 Sum_probs=27.3
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
+.=++|++.|+++++..|.+...+..+.++.+..
T Consensus 33 ~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 33 PWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3344567789999999999988888888887764
No 109
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=50.56 E-value=23 Score=25.65 Aligned_cols=59 Identities=15% Similarity=0.114 Sum_probs=39.2
Q ss_pred hHHHHHHHHhhcCCcE--EEEeCCcchHHHHHHHHcCcceEEECCCCCc--hh----hhHHHHHHhhCC
Q psy15173 5 GLKEVHEDCKKLNIEF--HFLIGGAHEILPQFVEKHKLGAVVIDFMPLR--EH----MGWADTLKKDLP 65 (131)
Q Consensus 5 gL~el~~~L~~~gI~l--~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr--~~----r~w~~~v~~~l~ 65 (131)
-|.++.+.++..|++. .+..|+|.+.|.++ +.+++.||....-.. .. -.-.+.|....+
T Consensus 75 ~l~~~~~~~~~~g~~~~~~~~~g~~~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~ 141 (268)
T 3ab8_A 75 VLERVRQSALAAGVAVEAVLEEGVPHEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASP 141 (268)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEECHHHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCHHHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCC
Confidence 3455556677778764 34689999999998 779999998765322 21 123455666665
No 110
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=49.99 E-value=29 Score=23.14 Aligned_cols=45 Identities=13% Similarity=0.133 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
..|+.++=+.|++.|+++.+..+.+...+..+.+..+. +.+++..
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~ 139 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGE 139 (214)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG
T ss_pred CchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecc
Confidence 35778888899999999999988888778888887765 4455543
No 111
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=55.16 E-value=3.5 Score=30.79 Aligned_cols=46 Identities=15% Similarity=0.262 Sum_probs=37.4
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
.|..++=+.|++.|+++.++.|++...+..++++.+...++.+-.|
T Consensus 139 ~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p 184 (263)
T 2yj3_A 139 PNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP 184 (263)
Confidence 4566777788999999999999998888999998888777665543
No 112
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=49.52 E-value=42 Score=22.39 Aligned_cols=43 Identities=14% Similarity=0.208 Sum_probs=33.0
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--cc---hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--AH---EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p~---~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.++.....++++-+| |. ..++.+|+++++..++..
T Consensus 32 ~G~~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 79 (120)
T 1xbi_A 32 KGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVA 79 (120)
T ss_dssp ESHHHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEES
T ss_pred ccHHHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeC
Confidence 58889999999888888888654 32 347899999998865553
No 113
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=48.74 E-value=27 Score=24.35 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
..|+.++=+.|++.|+++.+..+.+...+..+.+..+. +.|++..
T Consensus 85 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~ 133 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGD 133 (222)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTT
T ss_pred CCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecC
Confidence 35778888889999999999988887777888887774 4566543
No 114
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=48.03 E-value=35 Score=24.29 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..+.=++|++.|+++++..|.+...+..+.+..+..
T Consensus 25 ~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 25 ALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence 344455677889999999999988888888877664
No 115
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=47.36 E-value=30 Score=24.86 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
.+.-+.|++.|+++.+..|.+...+..+.++.+...++
T Consensus 26 ~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i 63 (258)
T 2pq0_A 26 IEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFV 63 (258)
T ss_dssp HHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEE
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEE
Confidence 33445677889999999999887777887776654444
No 116
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=47.08 E-value=32 Score=23.60 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc----eEEECCC--CCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG----AVVIDFM--PLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~----~Vv~d~~--ylr~~r~w~~~v~~~l 64 (131)
..|+.++-+.|++.|+++.+..+.+...+....+..+.. .+++..+ ..++...-...+.+.+
T Consensus 86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~l 153 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERL 153 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhh
Confidence 357888999999999999999888877777777776653 4454332 2333333444444444
No 117
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=46.78 E-value=47 Score=23.30 Aligned_cols=38 Identities=3% Similarity=0.055 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcc---------------hHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAH---------------EILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~---------------~~l~~l~~~~~a 40 (131)
..|..++=+.|++.|+++.+..+.+. ..+..+.++.+.
T Consensus 58 ~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 35777888889999999999988876 677788888775
No 118
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=46.50 E-value=24 Score=24.41 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=35.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+. +.|++..
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~ 153 (231)
T 3kzx_A 105 NDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSG 153 (231)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEET
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEccc
Confidence 45788888999999999999988887778888887774 5565544
No 119
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=46.32 E-value=50 Score=21.88 Aligned_cols=43 Identities=12% Similarity=0.307 Sum_probs=32.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--cc---hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--AH---EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p~---~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.++.....++++-+| |. ..++.+|+++++..++..
T Consensus 32 ~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~ 79 (120)
T 1vq8_F 32 KGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVE 79 (120)
T ss_dssp ESHHHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEES
T ss_pred ECHHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEEC
Confidence 47888889998888888887654 32 347889998888865553
No 120
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=46.17 E-value=37 Score=24.99 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~ 42 (131)
.+.-+.|++.|+++.+..|.+...+..+.++.+...
T Consensus 27 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 27 ENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 62 (288)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 344456778899999999999888888888776643
No 121
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=45.99 E-value=57 Score=21.77 Aligned_cols=43 Identities=14% Similarity=0.195 Sum_probs=32.9
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--cc---hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--AH---EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p~---~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.++.....++++-+| |. ..++.+|+++++..++..
T Consensus 31 ~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~ 78 (124)
T 2fc3_A 31 KGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVP 78 (124)
T ss_dssp ESHHHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEES
T ss_pred CCHHHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEEC
Confidence 48889999998888889888654 32 347899999998866553
No 122
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=45.76 E-value=30 Score=23.62 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+..
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 93 LPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 357788888999999999999888877777877776653
No 123
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=45.68 E-value=16 Score=28.70 Aligned_cols=44 Identities=14% Similarity=0.100 Sum_probs=36.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH----cCc--ceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK----HKL--GAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~----~~a--~~Vv~d 46 (131)
..++.+|-+.|++.|+..++..|.+.+.+.-++.. +++ ..|+..
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~ 194 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGV 194 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEee
Confidence 46789999999999999999999999999999986 344 455543
No 124
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=45.68 E-value=73 Score=22.08 Aligned_cols=47 Identities=9% Similarity=-0.086 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhhcCC--cEEEEeCCcchHHHHHHHHcCcceEEECCCC
Q psy15173 3 QLGLKEVHEDCKKLNI--EFHFLIGGAHEILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI--~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y 49 (131)
...+.++-+.|++.|. ..++.=|.+...-.+.+++.+++.|+.....
T Consensus 83 ~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~~~~~~ 131 (161)
T 2yxb_A 83 LHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFLPGTS 131 (161)
T ss_dssp HHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEECTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEECCCCC
Confidence 3456777888888763 1233346655544556788899888865543
No 125
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=45.34 E-value=32 Score=25.10 Aligned_cols=35 Identities=9% Similarity=-0.073 Sum_probs=27.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~ 42 (131)
...+++ ++.|+++++..|.+...+..+.+..+...
T Consensus 25 ~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 25 RRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred HHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 344444 67899999999999888888888877753
No 126
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=45.15 E-value=37 Score=23.68 Aligned_cols=43 Identities=21% Similarity=0.212 Sum_probs=33.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d 46 (131)
.|..++=+.|++.|+++.+..+.+...+..+.+..+. +.+++.
T Consensus 108 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~ 154 (240)
T 2no4_A 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSA 154 (240)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEG
T ss_pred CCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEc
Confidence 5777888889999999999988887777778877775 445554
No 127
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=45.10 E-value=45 Score=25.90 Aligned_cols=44 Identities=14% Similarity=0.244 Sum_probs=35.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcch-----HHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHE-----ILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~-----~l~~l~~~~~a~~Vv~d 46 (131)
..|+.++...++.....|+++-+|... .|+.+|+++++..++..
T Consensus 137 ~~G~keV~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~ 185 (266)
T 2zkr_f 137 RAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIK 185 (266)
T ss_dssp CBSHHHHHHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEES
T ss_pred eeChHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 358899999999988999998766422 57899999999988774
No 128
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=44.81 E-value=52 Score=25.43 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC--cch---HHHHHHHHcCcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG--AHE---ILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~--p~~---~l~~l~~~~~a~~Vv~d~ 47 (131)
..|+.++...++.....|+|+-+| |.+ .|+.+|+++++-.++...
T Consensus 126 k~GvneVtKaIekgKAqLVVIA~DvdPielv~~LPaLCee~~VPY~~V~s 175 (255)
T 4a17_F 126 KYGLNHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKG 175 (255)
T ss_dssp EECHHHHHHHHHTSCCSEEEEESCCSSTHHHHHHHHHHHHTTCCEEEESC
T ss_pred ecchHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHcCCCEEEECC
Confidence 358899999999988999988654 444 458899999998888763
No 129
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=44.72 E-value=21 Score=25.82 Aligned_cols=42 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred hhHHHHHHHHhhcCCcEE--EEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFH--FLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~--l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
+-|.++.+.|.+.|++.. +..|+|.+.|.+++++. +.||.-.
T Consensus 199 ~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~--dliV~G~ 242 (268)
T 3ab8_A 199 AWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPG--DLLALGA 242 (268)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTT--EEEEEEC
T ss_pred HHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhC--CEEEECC
Confidence 456778888888888754 45799999999999986 8887765
No 130
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=44.37 E-value=58 Score=20.59 Aligned_cols=56 Identities=9% Similarity=0.157 Sum_probs=36.7
Q ss_pred HHHHHHHHhhcCCcEEEEe-CCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHh
Q psy15173 6 LKEVHEDCKKLNIEFHFLI-GGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKK 62 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~-G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~ 62 (131)
...+...|+..|....+.. .+..+ ..+.+++...+.|++|..- ........+.+.+
T Consensus 18 ~~~l~~~L~~~~~~~~v~~~~~~~~-a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~ 75 (144)
T 3kht_A 18 IALIRRVLDRKDIHCQLEFVDNGAK-ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRK 75 (144)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSHHH-HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCeeEEEECCHHH-HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4557778888888754543 44444 4556677789999999863 3334556666665
No 131
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=44.36 E-value=24 Score=25.57 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
+.=+.|++.|+++++..|.+...+..+.+..+..
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3335667889999999999988888888887764
No 132
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=44.12 E-value=61 Score=20.72 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=30.6
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcch----HHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHE----ILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~----~l~~l~~~~~a~~Vv~ 45 (131)
.|..++.+.+++....|+++-.|..+ .++.+|+.+++..+++
T Consensus 21 ~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 21 TGEEQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp ESHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECHHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 47788888888878888887665432 4567788888886654
No 133
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=43.87 E-value=49 Score=24.34 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=29.6
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
.++-+.+++.|+++.+---+..+.+..++.+.|++.|+||+
T Consensus 184 ~~~v~~~~~~G~~v~~wTvn~~~~~~~~l~~~GvdgIiTD~ 224 (248)
T 1zcc_A 184 PGIIEASRKAGLEIMVYYGGDDMAVHREIATSDVDYINLDR 224 (248)
T ss_dssp HHHHHHHHHHTCEEEEECCCCCHHHHHHHHHSSCSEEEESC
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCEEEECC
Confidence 45567778889998886444445566645678999999996
No 134
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=43.65 E-value=36 Score=23.34 Aligned_cols=44 Identities=14% Similarity=0.139 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d 46 (131)
..|+.++=+.|++.|+++.+..+.+...+....+..+. +.+++.
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~ 148 (233)
T 3umb_A 101 FPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSV 148 (233)
T ss_dssp CTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEG
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEe
Confidence 35777888889999999999988887777777776664 345544
No 135
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=43.11 E-value=31 Score=26.81 Aligned_cols=41 Identities=12% Similarity=0.151 Sum_probs=31.0
Q ss_pred chhhHHHHHHHHhhcCCcEEEEeCC-cchHHHHHH-----HHcCcce
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFLIGG-AHEILPQFV-----EKHKLGA 42 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~~G~-p~~~l~~l~-----~~~~a~~ 42 (131)
|-+.|.++.+.+++.||+.++.... +...+..++ ++.++..
T Consensus 231 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~~~~A~e~gv~v 277 (313)
T 1toa_A 231 SAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQI 277 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHHTTTCCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHccchhhhcCCce
Confidence 5567899999999999999887543 455566677 7888765
No 136
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=43.04 E-value=70 Score=24.74 Aligned_cols=46 Identities=11% Similarity=0.117 Sum_probs=34.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc------------------hHHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH------------------EILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~------------------~~l~~l~~~~~a~~Vv~d~~y 49 (131)
+.+.++.+.+++.|+.+....+.+. ....+++++.++..|++|+.|
T Consensus 55 ~~~~~~~~~l~~~GL~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~n~~p 118 (367)
T 1tz9_A 55 AEIQALKQSVEQEGLALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCYSFKP 118 (367)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 5788999999999999876542221 134457889999999998876
No 137
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=42.12 E-value=51 Score=21.80 Aligned_cols=43 Identities=12% Similarity=0.230 Sum_probs=32.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--c---chHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--A---HEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p---~~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.++.....++++-+| | ...++.+|++.++..++..
T Consensus 30 ~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~ 77 (119)
T 1rlg_A 30 KGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVK 77 (119)
T ss_dssp ESHHHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEES
T ss_pred ECHHHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeC
Confidence 58889999998888888887654 3 2458899999998865553
No 138
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=42.02 E-value=28 Score=24.06 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~~ 48 (131)
..|+.++=+.|++.|+++.+..+.+...+..+.+..+. +.+++...
T Consensus 106 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~ 155 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDS 155 (237)
T ss_dssp CTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTT
T ss_pred CCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCC
Confidence 45778888899999999999988887777777777664 55665543
No 139
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=41.54 E-value=62 Score=21.66 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=32.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--cc---hHHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--AH---EILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p~---~~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++....|+++-+| |. ..++.+|+++++..++..
T Consensus 34 ~G~~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 81 (122)
T 3o85_A 34 RGANEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIG 81 (122)
T ss_dssp ESHHHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEES
T ss_pred EcHHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 47888889998888888888654 32 347888998888865544
No 140
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=41.52 E-value=31 Score=23.99 Aligned_cols=62 Identities=6% Similarity=-0.109 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECCC--CCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDFM--PLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~~--ylr~~r~w~~~v~~~l 64 (131)
..|..++=+.|++.|+++.+..+.+...+..+.+..+. +.+++... .......-...+.+.+
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 179 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLC 179 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHc
Confidence 35778888899999999999988887778888887775 44554332 2233444444445444
No 141
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=41.45 E-value=28 Score=25.17 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=33.3
Q ss_pred hhHHHHHHHH--hhcCCcEEEEeCCc---ch--------HHHHHHHHcCcceEEECC
Q psy15173 4 LGLKEVHEDC--KKLNIEFHFLIGGA---HE--------ILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L--~~~gI~l~l~~G~p---~~--------~l~~l~~~~~a~~Vv~d~ 47 (131)
.|+.+..+.| .+....|.++-+|. .. .|+.||.++++..|..+.
T Consensus 38 ~G~kEt~KaL~~~k~~a~lcvLA~D~d~~~~i~~hi~~~li~alC~E~~Ip~i~V~s 94 (165)
T 2kg4_A 38 VGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSN 94 (165)
T ss_dssp ECGGGHHHHHHHCTTTEEEEEEECCTGGGGCHHHHHHHHHHHHHHHHTTCCEEEESC
T ss_pred ecHHHHHHHHhcCCCcEEEEEEeCCCCccchhhhhccHHHHHHHHHHcCCCEEEECC
Confidence 5788888888 66677777776653 22 256999999999999875
No 142
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=41.44 E-value=65 Score=22.74 Aligned_cols=37 Identities=3% Similarity=-0.036 Sum_probs=24.1
Q ss_pred hhHHHHHHHHhhcCCc-EEEEeCCcchHHHHHHHHcCc
Q psy15173 4 LGLKEVHEDCKKLNIE-FHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~-l~l~~G~p~~~l~~l~~~~~a 40 (131)
.++++...+++++|+. ++.+.-|......+++++.+.
T Consensus 63 ~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 63 PEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp HHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCC
Confidence 4556666667777775 555666666666777776665
No 143
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=41.42 E-value=45 Score=22.93 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=32.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d 46 (131)
.|..++=+.|++.|+++.+..+.+...+..+.+..+. +.+++.
T Consensus 98 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~ 144 (232)
T 1zrn_A 98 SEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV 144 (232)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEe
Confidence 5677777888889999999888877777777777664 345554
No 144
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=41.02 E-value=47 Score=26.87 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH--------cCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK--------HKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~--------~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
..|+.++=+.|+++||++.+..+.+.+.+...+++ .+...++.... ....-...+++.+
T Consensus 258 ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~K---PKp~~l~~al~~L 324 (387)
T 3nvb_A 258 FTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWE---NKADNIRTIQRTL 324 (387)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESS---CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccCccEEEeCCC---CcHHHHHHHHHHh
Confidence 46788999999999999999999988888888876 35555554332 3333344444444
No 145
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=40.96 E-value=39 Score=23.76 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCc---------------chHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGA---------------HEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p---------------~~~l~~l~~~~~a~ 41 (131)
..|..++=+.|++.|+++.+..+.+ ...+....++.+..
T Consensus 52 ~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 3678888899999999999998877 36677777877763
No 146
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=40.81 E-value=8.1 Score=23.65 Aligned_cols=26 Identities=23% Similarity=0.258 Sum_probs=21.1
Q ss_pred CCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 17 NIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 17 gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
+|||+| +|....-+.++|++.|...|
T Consensus 15 kIP~FV-R~kvrr~tE~~Are~G~~~I 40 (62)
T 2l09_A 15 NIPFFA-RSQAKARIEQLARQAEQDIV 40 (62)
T ss_dssp TSCGGG-HHHHHHHHHHHHHHTTCSEE
T ss_pred hCCHHH-HHHHHHHHHHHHHHcCCCeE
Confidence 499876 67777788999999888765
No 147
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=40.77 E-value=47 Score=24.41 Aligned_cols=31 Identities=3% Similarity=0.147 Sum_probs=25.8
Q ss_pred HHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 11 EDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 11 ~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
++|++.|+.+++..|.+...+..+.++.+..
T Consensus 32 ~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 32 AAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp HHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4567889999999999988888888887764
No 148
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=40.27 E-value=45 Score=23.42 Aligned_cols=62 Identities=10% Similarity=0.097 Sum_probs=40.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC---cceEEECCC--CCchhhhHHHHHHhhCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK---LGAVVIDFM--PLREHMGWADTLKKDLP 65 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~---a~~Vv~d~~--ylr~~r~w~~~v~~~l~ 65 (131)
.|+.++=+.|++.|+++.+..+.+...+....+..+ .+.|++... ..++...-...+++.+.
T Consensus 113 ~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~ 179 (240)
T 2hi0_A 113 PGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLG 179 (240)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcC
Confidence 577788888999999998888777666666666665 356666433 23333444445555553
No 149
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=39.91 E-value=72 Score=20.41 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=30.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcch----HHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHE----ILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~----~l~~l~~~~~a~~Vv~ 45 (131)
-|..++.+.+++-...|+++-.|..+ .++.+|+.+++..+++
T Consensus 22 ~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 22 SGEDLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp ESHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cchhhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee
Confidence 46778888888877888887665433 4567788888887766
No 150
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=39.57 E-value=66 Score=21.31 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=30.9
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcch----HHHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHE----ILPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~----~l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++-...|+++-.|..+ .++.+|..+++..++++
T Consensus 29 ~G~~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~ 75 (112)
T 3iz5_f 29 LGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFH 75 (112)
T ss_dssp ESHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCC
T ss_pred ECHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeC
Confidence 46778888888877888887665433 35667888888877663
No 151
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=39.51 E-value=38 Score=22.74 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC--cch---HHHHHHHHcCcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG--AHE---ILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~--p~~---~l~~l~~~~~a~~Vv~d~ 47 (131)
..|+.++.+.+++....|+++-+| |.+ .++.+|+++++..++...
T Consensus 27 ~~G~~~v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~s 76 (113)
T 3jyw_G 27 KYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKG 76 (113)
T ss_dssp EESHHHHHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSC
T ss_pred hchHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 358899999999888999998665 433 378999999998776654
No 152
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=39.47 E-value=88 Score=28.03 Aligned_cols=38 Identities=8% Similarity=0.101 Sum_probs=33.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.||..+++.||.......++++.++.
T Consensus 606 ~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred hhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 46677778899999999999999999999999999884
No 153
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=39.44 E-value=55 Score=22.30 Aligned_cols=36 Identities=17% Similarity=0.167 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++.+.|+.++.+.-++.+.+.++++++
T Consensus 51 ~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~ 86 (187)
T 1we0_A 51 LEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENS 86 (187)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHh
Confidence 456788888998889999888888888888898876
No 154
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=39.41 E-value=50 Score=23.46 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=32.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------CcchHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------GAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------~p~~~l~~l~~~~~a~~Vv~ 45 (131)
+..|.++.+++.+.|+.++.+.. +..+.+.+++++++...-+.
T Consensus 78 ~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l 128 (218)
T 3u5r_E 78 REALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYL 128 (218)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEE
Confidence 45688899999988988887765 56677888999888754433
No 155
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=39.23 E-value=42 Score=22.83 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
..|..++=+.|++. +++.+..+.+...+..+++..+....+
T Consensus 71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f 111 (206)
T 1rku_A 71 LEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL 111 (206)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE
T ss_pred CccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee
Confidence 35778888889998 999999988888888888888876443
No 156
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=39.20 E-value=46 Score=22.64 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+.
T Consensus 98 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 135 (230)
T 3um9_A 98 FADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGL 135 (230)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 35777888888999999988888777777777766554
No 157
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=39.09 E-value=34 Score=23.49 Aligned_cols=39 Identities=10% Similarity=0.179 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC---------------cchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG---------------AHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~---------------p~~~l~~l~~~~~a~ 41 (131)
..|..++=+.|++.|+++.+..+. +...+..+++..+..
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 357888888999999999998776 566777788887765
No 158
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=38.28 E-value=35 Score=23.28 Aligned_cols=63 Identities=16% Similarity=0.127 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECCCC--CchhhhHHHHHHhhCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDFMP--LREHMGWADTLKKDLP 65 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~~y--lr~~r~w~~~v~~~l~ 65 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+. +.+++.... ......-...+.+.+.
T Consensus 88 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg 156 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLN 156 (226)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhC
Confidence 45788888999999999999988887777777777664 345544332 2334444455555553
No 159
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=38.16 E-value=40 Score=24.06 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=29.9
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d 46 (131)
.+.=+.|++.|+.+.+..|.+...+..+.++.+...+++.
T Consensus 28 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~ 67 (274)
T 3fzq_A 28 KHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAG 67 (274)
T ss_dssp HHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEET
T ss_pred HHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEec
Confidence 3344556788999999999887777888887777655554
No 160
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=38.07 E-value=82 Score=20.48 Aligned_cols=42 Identities=17% Similarity=0.103 Sum_probs=28.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc----hHHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH----EILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~----~~l~~l~~~~~a~~Vv~ 45 (131)
.|..++.+.+++....|+++-.|.+ ..++.+|+++++..+++
T Consensus 24 ~G~~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 24 LGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp ESHHHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4677778888777777777765532 23566787777775554
No 161
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.97 E-value=78 Score=20.22 Aligned_cols=63 Identities=10% Similarity=0.073 Sum_probs=38.1
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|...|..+.+..-...+...+.+++...+.|++|.. +........+.+.+..+ .+|
T Consensus 33 ~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~-~~~ 96 (150)
T 4e7p_A 33 RDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKL-ETK 96 (150)
T ss_dssp HHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTC-SCE
T ss_pred HHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCC-CCe
Confidence 3456677777764454443333334556667788999999976 34445566666665443 344
No 162
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=37.88 E-value=67 Score=23.08 Aligned_cols=36 Identities=8% Similarity=0.152 Sum_probs=28.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..+.=++|++.|+.+++..|.+...+..+.+..+..
T Consensus 27 ~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 27 TIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDID 62 (279)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 334445677889999999999988888888887754
No 163
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=37.81 E-value=43 Score=26.86 Aligned_cols=39 Identities=18% Similarity=0.003 Sum_probs=32.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|+.++=+.|++.|+++.+..+.+...+....+..+..
T Consensus 217 ~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~ 255 (384)
T 1qyi_A 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255 (384)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh
Confidence 458899999999999999999998887777777777753
No 164
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=37.54 E-value=80 Score=20.74 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHhhcC--CcEEEEeCC----cchHHHHHHHHcCcce
Q psy15173 3 QLGLKEVHEDCKKLN--IEFHFLIGG----AHEILPQFVEKHKLGA 42 (131)
Q Consensus 3 ~~gL~el~~~L~~~g--I~l~l~~G~----p~~~l~~l~~~~~a~~ 42 (131)
+..|.++.+++.+.| +.++.+.-+ ..+.+.+++++++...
T Consensus 53 ~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~ 98 (174)
T 1xzo_A 53 TAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSF 98 (174)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCG
T ss_pred HHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 456888888998887 877777654 4567889999888763
No 165
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=37.35 E-value=76 Score=28.54 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=33.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.||..+++.||.......++++.|+.
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence 45566677899999999999999999999999999985
No 166
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=37.30 E-value=51 Score=22.74 Aligned_cols=36 Identities=6% Similarity=0.033 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++.+.|+.++.+.-++.+.+.++++++
T Consensus 65 ~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~ 100 (195)
T 2bmx_A 65 IAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQH 100 (195)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHh
Confidence 346778888888889999888888888889999876
No 167
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=37.28 E-value=67 Score=24.78 Aligned_cols=45 Identities=13% Similarity=0.222 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcc-----hHHHHHHHHcCcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAH-----EILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~-----~~l~~l~~~~~a~~Vv~d~ 47 (131)
..|+.++.+.++.....|+++-+|.. ..|+.+|+++++..++...
T Consensus 133 k~G~keV~KaIekgKAkLVVIA~DadP~eivk~LpaLC~k~gVPy~~V~s 182 (256)
T 3izc_H 133 KYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKG 182 (256)
T ss_dssp EESHHHHHHHHHHTCCSEEEEESCCSSGGGTTHHHHHHHHHTCCEEEESC
T ss_pred hccHHHHHHHHHhCcceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECC
Confidence 35888999999888888988866542 2358899999998776654
No 168
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=36.38 E-value=53 Score=22.87 Aligned_cols=44 Identities=20% Similarity=0.205 Sum_probs=33.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d 46 (131)
..|+.++=+.|++.|+++.+..+.+...+....+..+. +.+++.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~ 143 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIIS 143 (241)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEG
T ss_pred CccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEe
Confidence 45788888889999999999888777777777777765 345553
No 169
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=36.38 E-value=50 Score=23.28 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|+.++-+.|++.|+++.+..+.+...+....+..+..
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 357788888899999999999888877788888777753
No 170
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=36.36 E-value=48 Score=23.64 Aligned_cols=36 Identities=8% Similarity=0.079 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-|..+.+.++++++
T Consensus 68 ~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~ 103 (211)
T 2pn8_A 68 IIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTP 103 (211)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHh
Confidence 356888888999899999888888877888999876
No 171
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=36.18 E-value=59 Score=20.62 Aligned_cols=62 Identities=11% Similarity=0.078 Sum_probs=39.6
Q ss_pred HHHHHHHHhhcC-CcEEEEeCCcchHHHHHHHH-cCcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLN-IEFHFLIGGAHEILPQFVEK-HKLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~g-I~l~l~~G~p~~~l~~l~~~-~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|...| ..... ..+..+.+..+.+. ...+.|++|... ....-...+.+.+..+ .+|
T Consensus 33 ~~~l~~~L~~~g~~~v~~-~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~-~~~ 97 (146)
T 4dad_A 33 LAHLARLVGDAGRYRVTR-TVGRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHP-GLT 97 (146)
T ss_dssp HHHHHHHHHHHCSCEEEE-ECCCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCT-TCE
T ss_pred HHHHHHHHhhCCCeEEEE-eCCHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCC-CCc
Confidence 345677788888 66554 45566667777766 789999999873 3334455555555443 344
No 172
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=36.02 E-value=62 Score=25.96 Aligned_cols=41 Identities=7% Similarity=0.095 Sum_probs=29.5
Q ss_pred CchhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 1 MSQLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 1 ~~~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
++.+++..|.+.+++.||+|+---=|+.. .+++.++++..+
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~s--vd~l~~~~v~~~ 115 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEES--VDLIEAHGIEII 115 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHH--HHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHH--HHHHHHcCCCEE
Confidence 46789999999999999998765434322 356666666654
No 173
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=35.34 E-value=52 Score=22.88 Aligned_cols=36 Identities=3% Similarity=-0.092 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-|+.+.+.++++++
T Consensus 56 ~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~ 91 (202)
T 1uul_A 56 ICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIE 91 (202)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 356788888998899999888888878888898876
No 174
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=35.31 E-value=87 Score=22.46 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..+.=++|++.|+.+.+..|.+...+..+.++.+.
T Consensus 27 ~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 27 NRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM 61 (279)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence 34444567788999999999998888888888775
No 175
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=35.12 E-value=87 Score=21.13 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------CcchHHHHHHHHcCcce
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------GAHEILPQFVEKHKLGA 42 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------~p~~~l~~l~~~~~a~~ 42 (131)
...|.++.+++.+.|+.++.+.- +..+.+.+++++++...
T Consensus 65 ~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~ 112 (196)
T 2ywi_A 65 QHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPF 112 (196)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCc
Confidence 34577888888888898888764 45667888888887654
No 176
>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum}
Probab=35.09 E-value=8.1 Score=23.73 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=21.0
Q ss_pred CCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 17 NIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 17 gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
+|||+| +|....-+.++|++.|...|
T Consensus 16 kIP~FV-R~kvrr~tE~~Are~G~~~I 41 (63)
T 2kru_A 16 KVPFFV-RKKVRKNTDNYAREIGEPVV 41 (63)
T ss_dssp TSCHHH-HHHHHHHHHHHHHHHTCSEE
T ss_pred hCCHHH-HHHHHHHHHHHHHHcCCCeE
Confidence 599876 57777788999999888765
No 177
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=34.95 E-value=86 Score=22.62 Aligned_cols=35 Identities=11% Similarity=-0.018 Sum_probs=27.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK 37 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~ 37 (131)
+..|.++.++++++|+.++.+.-|+.+...+++++
T Consensus 51 l~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~ 85 (224)
T 1prx_A 51 LGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKD 85 (224)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 34678888888888988888887777777777775
No 178
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=34.48 E-value=25 Score=26.21 Aligned_cols=29 Identities=21% Similarity=0.036 Sum_probs=23.4
Q ss_pred CcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 18 IEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 18 I~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
+...+..|+|.+.|.++++ +++.||.-..
T Consensus 248 ~~~~~~~g~~~~~I~~~a~--~adliV~G~~ 276 (309)
T 3cis_A 248 ITRVVVRDQPARQLVQRSE--EAQLVVVGSR 276 (309)
T ss_dssp EEEEEESSCHHHHHHHHHT--TCSEEEEESS
T ss_pred EEEEEEcCCHHHHHHHhhC--CCCEEEECCC
Confidence 3455678999999999998 8999988654
No 179
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=34.39 E-value=89 Score=19.81 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=30.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCc-ch---HHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGA-HE---ILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p-~~---~l~~l~~~~~a~~Vv~ 45 (131)
.|..++.+.+++....|+++-.|. .+ .++.+|+++++..+++
T Consensus 18 ~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 18 LGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp ESHHHHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ECHHHHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 478888888988888888876553 22 3567788888886554
No 180
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=34.12 E-value=69 Score=21.67 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCc---chHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGA---HEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p---~~~l~~l~~~~~a 40 (131)
..|..++=+.|++.|+++.+..+.+ ...+....+..+.
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l 141 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGL 141 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCc
Confidence 3567777777888888888877766 6666666666553
No 181
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=33.86 E-value=1.4e+02 Score=22.33 Aligned_cols=44 Identities=5% Similarity=-0.040 Sum_probs=30.5
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCc----------------chHHHHHHHHcCcceEEECCC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGA----------------HEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p----------------~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
.+.++.+.|++.|+.+....... .....++|++.++..|++-..
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~ 136 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL 136 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 67888999999999876543211 112346788899999988543
No 182
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=33.83 E-value=79 Score=22.83 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=27.9
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+.=++|++.|+.+++..|.+...+..+.+..+..
T Consensus 29 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 29 KDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp HHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 34445667789999999999988888888888765
No 183
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=33.76 E-value=75 Score=21.73 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC--------cchHHHHHH-HHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG--------AHEILPQFV-EKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~--------p~~~l~~l~-~~~~a~~Vv~ 45 (131)
+..|.++.+++.+.|+.++.+.-+ ..+.+.+++ +++++.--+.
T Consensus 67 ~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l 118 (190)
T 2vup_A 67 YETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 118 (190)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred HHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEE
Confidence 356788888898889988887543 456788888 7877654433
No 184
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=33.70 E-value=93 Score=19.85 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=29.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEe--CCcchHHHHHHHHcCcce
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLI--GGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~--G~p~~~l~~l~~~~~a~~ 42 (131)
..|.++.+++...|+.++.+. .++.+.+.+++++++...
T Consensus 48 ~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T 2l5o_A 48 PKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPF 88 (153)
T ss_dssp HHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCc
Confidence 346677777777788777665 567778888998888774
No 185
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=33.69 E-value=17 Score=24.36 Aligned_cols=40 Identities=15% Similarity=0.215 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
..|..++=+.|++.|+++.+..+.+...+..+ +..+...+
T Consensus 81 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~ 120 (201)
T 4ap9_A 81 SPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM 120 (201)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh
Confidence 46788888999999999999988777666666 76666543
No 186
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=33.53 E-value=58 Score=23.52 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-|..+.+.+++++.
T Consensus 76 ~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~ 111 (221)
T 2c0d_A 76 IIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMP 111 (221)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh
Confidence 346788888898899998888888877889999987
No 187
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=33.49 E-value=94 Score=21.09 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=31.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--cc---hHHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--AH---EILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--p~---~~l~~l~~~~~a~~Vv~ 45 (131)
.|..++.+.+++....|+++-+| |. ..++.+|+++++..+++
T Consensus 44 ~G~~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 44 KGANEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp ESHHHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCHHHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE
Confidence 47888888888877888887544 32 34678888888887665
No 188
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=33.45 E-value=27 Score=23.92 Aligned_cols=34 Identities=6% Similarity=0.080 Sum_probs=22.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK 39 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~ 39 (131)
++.+.+-|.++||++.+..-++...+.+.++..+
T Consensus 4 ~~~v~~~L~~~~i~~~~~~~~~~~t~~~~a~~lg 37 (152)
T 3op6_A 4 VKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAH 37 (152)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTCCHHHHC----
T ss_pred HHHHHHHHHHcCCceEEEEcCCCCCHHHHHHHcC
Confidence 4578889999999998876445555666665444
No 189
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=33.22 E-value=11 Score=29.88 Aligned_cols=47 Identities=21% Similarity=0.381 Sum_probs=36.5
Q ss_pred CCcEEEEeCCcchHHHHHHHHcCcceEEEC-CCCCchhhhHHHHHHhhC
Q psy15173 17 NIEFHFLIGGAHEILPQFVEKHKLGAVVID-FMPLREHMGWADTLKKDL 64 (131)
Q Consensus 17 gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d-~~ylr~~r~w~~~v~~~l 64 (131)
+|.+.+..||..+.++++. ...+++++.| |+|-+.+.-|...+-+.+
T Consensus 165 ~v~L~l~~GDa~~~l~~l~-~~~~Da~flDgFsP~kNPeLWs~e~f~~l 212 (308)
T 3vyw_A 165 RLSLKVLLGDARKRIKEVE-NFKADAVFHDAFSPYKNPELWTLDFLSLI 212 (308)
T ss_dssp SEEEEEEESCHHHHGGGCC-SCCEEEEEECCSCTTTSGGGGSHHHHHHH
T ss_pred cEEEEEEechHHHHHhhhc-ccceeEEEeCCCCcccCcccCCHHHHHHH
Confidence 4677778899988888763 3468999999 789998888888765444
No 190
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=32.89 E-value=91 Score=19.49 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|+..|.... ...+..+ ..+.+++...+.|++|..+....-...+.+.+..+ .+|
T Consensus 17 ~~~l~~~L~~~g~~v~-~~~~~~~-a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~-~~p 77 (142)
T 2qxy_A 17 FLAVKNALEKDGFNVI-WAKNEQE-AFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFP-DTK 77 (142)
T ss_dssp HHHHHHHHGGGTCEEE-EESSHHH-HHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCT-TCE
T ss_pred HHHHHHHHHhCCCEEE-EECCHHH-HHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCC-CCC
Confidence 4567778888888655 3445544 44556667899999998333234455556655543 345
No 191
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=32.80 E-value=61 Score=25.93 Aligned_cols=41 Identities=7% Similarity=0.021 Sum_probs=28.2
Q ss_pred CchhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 1 MSQLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 1 ~~~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
++.+++..|.+.+++.||+|+---=|+.. .+++.++++..+
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~s--vd~l~~~~v~~~ 128 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAA--ALRLQRMDIPAY 128 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHH--HHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHH--HHHHHhcCCCEE
Confidence 46789999999999999998764434432 255555555443
No 192
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=32.72 E-value=53 Score=25.27 Aligned_cols=38 Identities=8% Similarity=0.142 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEE
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~ 45 (131)
|+-+.....|||.++-.+.|-..-.++|++.|+..|=+
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf 243 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAY 243 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEE
Confidence 45556677799999988888888889999999887644
No 193
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=32.68 E-value=1.3e+02 Score=21.26 Aligned_cols=46 Identities=13% Similarity=-0.096 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhcCCcEEEEe-CCcchHHHHHHHHcCcceEEECCCCC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLI-GGAHEILPQFVEKHKLGAVVIDFMPL 50 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~-G~p~~~l~~l~~~~~a~~Vv~d~~yl 50 (131)
|+.-+..-|+..|...+.+- .-|.+.+.+.+++.+++.|.......
T Consensus 104 G~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~ 150 (210)
T 1y80_A 104 GKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLT 150 (210)
T ss_dssp HHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSG
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc
Confidence 56667777778887766542 34667777777777888887766544
No 194
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=32.64 E-value=96 Score=19.67 Aligned_cols=42 Identities=10% Similarity=0.102 Sum_probs=28.4
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc----hHHHHHHHHcCcceEEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH----EILPQFVEKHKLGAVVI 45 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~----~~l~~l~~~~~a~~Vv~ 45 (131)
.|..++.+.+++....++++-.|.+ ..++.+|+++++..+++
T Consensus 19 ~G~~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 19 MGARKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp ESHHHHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECHHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 4777888888877778877765432 23566788777775544
No 195
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=32.24 E-value=1.1e+02 Score=20.52 Aligned_cols=43 Identities=19% Similarity=0.154 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHhhcCC------cEEEEeCCc--chHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNI------EFHFLIGGA--HEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI------~l~l~~G~p--~~~l~~l~~~~~a~~Vv~ 45 (131)
...|.++.+++.+.|+ .++.+.-+. .+.+.+++++++..-.+.
T Consensus 78 ~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 128 (183)
T 3lwa_A 78 SDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSI 128 (183)
T ss_dssp HHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEE
Confidence 3568889999999998 887776544 678899999888764443
No 196
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=32.05 E-value=40 Score=21.90 Aligned_cols=41 Identities=7% Similarity=0.091 Sum_probs=30.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV 44 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv 44 (131)
..|.++.++++..|+.++.+..+..+.+.+++++++..--+
T Consensus 44 ~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~ 84 (151)
T 3raz_A 44 PAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPI 84 (151)
T ss_dssp HHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCce
Confidence 34666666776678888888777778889999988876443
No 197
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=32.05 E-value=42 Score=21.80 Aligned_cols=40 Identities=10% Similarity=-0.026 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEe-------CCcchHHHHHHHHcCcce
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLI-------GGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~-------G~p~~~l~~l~~~~~a~~ 42 (131)
+..|.++.+++...|+.++.+. .+..+.+.+++++++...
T Consensus 48 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (158)
T 3eyt_A 48 IPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKF 94 (158)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred hHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCc
Confidence 4567777777777788877765 456778899999888764
No 198
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=31.97 E-value=61 Score=23.73 Aligned_cols=36 Identities=6% Similarity=0.022 Sum_probs=30.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-|+.+.+.++++++
T Consensus 97 l~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~ 132 (240)
T 3qpm_A 97 IIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITP 132 (240)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
Confidence 457888999999999998888888888888998865
No 199
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=31.92 E-value=1e+02 Score=22.57 Aligned_cols=39 Identities=5% Similarity=0.118 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCcEEEEeC----CcchHHHHHHHHcCcceEEECC
Q psy15173 8 EVHEDCKKLNIEFHFLIG----GAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G----~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
++-+.++++|++.++--- +..+.+..+. +.|++.|+||+
T Consensus 203 ~~v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~-~~GvdgI~TD~ 245 (258)
T 2o55_A 203 EQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCL-ELQVDLICSNY 245 (258)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCCCHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHHHHCCCEEEEeeCCCCCCCHHHHHHHH-HcCCCEEEeCC
Confidence 445667778887777544 4444455544 45788888885
No 200
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=31.90 E-value=21 Score=23.56 Aligned_cols=39 Identities=5% Similarity=-0.047 Sum_probs=28.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~ 42 (131)
..|.++.+++.+.|+.++.+..+..+.+.+++++++...
T Consensus 57 ~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 95 (160)
T 1xvw_A 57 DQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTF 95 (160)
T ss_dssp HHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCc
Confidence 345666666666788888877777778888888877654
No 201
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=31.77 E-value=55 Score=22.33 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHhhc-CCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKL-NIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~-gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..|+.++=+.|++. |+++.+..+.+...+....+..+..
T Consensus 95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 95 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 46788888899999 9999999888877777777776654
No 202
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=31.66 E-value=47 Score=22.95 Aligned_cols=35 Identities=3% Similarity=0.001 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK 37 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~ 37 (131)
+..|.++.+++.+.|+.++.+..++.+.+.+++++
T Consensus 53 ~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~ 87 (198)
T 1zof_A 53 IIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNT 87 (198)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHh
Confidence 45678888899888999888888877888888887
No 203
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=31.39 E-value=17 Score=25.52 Aligned_cols=43 Identities=21% Similarity=0.309 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchH-----HHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEI-----LPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~-----l~~l~~~~~a~~Vv~d 46 (131)
.|..++.+.+++....|+++-+|..+. ++.+|++.++..++..
T Consensus 53 ~G~kev~KaI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~ 100 (144)
T 2jnb_A 53 KGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVR 100 (144)
T ss_dssp BCHHHHHHHHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEES
T ss_pred ccHHHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEC
Confidence 578888888888888888887654432 4667888888877665
No 204
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=31.35 E-value=96 Score=22.11 Aligned_cols=46 Identities=15% Similarity=0.267 Sum_probs=33.3
Q ss_pred chhhHHHHHHHHhhcCCc-EEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 2 SQLGLKEVHEDCKKLNIE-FHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~-l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
|..++....+.+++.|++ +.+..||..+.++........+.|++++
T Consensus 67 s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 67 HSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 456777777777777764 6777899887777655555678888875
No 205
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=31.08 E-value=55 Score=22.60 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=24.9
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
.|+.++=+.|++.|+++.+..+.+.. +....+..+.
T Consensus 98 ~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl 133 (220)
T 2zg6_A 98 DDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDL 133 (220)
T ss_dssp TTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTC
T ss_pred cCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCc
Confidence 56777777788888888887766553 5566666663
No 206
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=30.90 E-value=75 Score=22.67 Aligned_cols=36 Identities=8% Similarity=0.106 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+..++.+.+.++++++
T Consensus 76 ~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~ 111 (220)
T 1zye_A 76 IIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTP 111 (220)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
Confidence 456888889998899999888888877788888765
No 207
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=30.81 E-value=90 Score=20.83 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=31.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc----ceEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL----GAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d~ 47 (131)
.|..++=+.|++.|+++.+..+.+...+..+.+..+. ..+++..
T Consensus 97 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~ 144 (226)
T 1te2_A 97 PGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE 144 (226)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECT
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEecc
Confidence 4667777788888999988888777767777776664 3455543
No 208
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=30.79 E-value=97 Score=19.17 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=36.6
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHhh
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKKD 63 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~~ 63 (131)
...+...|++.|..... ..+..+.+..+.+....+.|++|.. |....-...+.+.+.
T Consensus 20 ~~~l~~~L~~~g~~v~~-~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 77 (136)
T 3hdv_A 20 REALILYLKSRGIDAVG-ADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRAS 77 (136)
T ss_dssp HHHHHHHHHHTTCCEEE-ESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCceEEE-eCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhc
Confidence 45567778888887654 3555555555554434899999977 444455666666654
No 209
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=30.75 E-value=38 Score=23.94 Aligned_cols=45 Identities=16% Similarity=0.229 Sum_probs=33.4
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc-CcceEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH-KLGAVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~-~a~~Vv~d~ 47 (131)
..|+.++=+.|++.|+++.+..+.+...+..+++.. +...|++..
T Consensus 79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l~~~~~v~~~~ 124 (236)
T 2fea_A 79 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNH 124 (236)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEE
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcCCCCCeEEeee
Confidence 357888889999999999999988877777776621 225566643
No 210
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=30.66 E-value=1.1e+02 Score=19.90 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=28.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc---------------hHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH---------------EILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~---------------~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.|+++.+..|.+. ..+.++++++++.
T Consensus 27 ~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~~~ 79 (126)
T 1xpj_A 27 LDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (126)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcCCC
Confidence 4556666778889999999998764 3466777777764
No 211
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=30.52 E-value=25 Score=20.66 Aligned_cols=14 Identities=14% Similarity=0.242 Sum_probs=10.7
Q ss_pred ChhhHHHHHHHHHH
Q psy15173 85 HSKAVDSFCEEAIV 98 (131)
Q Consensus 85 ~~~~~~~fleEliv 98 (131)
..+.||+||++++-
T Consensus 21 ~~~EVD~FLd~v~~ 34 (57)
T 2wuj_A 21 DEDEVNEFLAQVRK 34 (57)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 44569999999863
No 212
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=29.89 E-value=1.2e+02 Score=22.32 Aligned_cols=36 Identities=6% Similarity=0.096 Sum_probs=15.0
Q ss_pred HHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 11 EDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 11 ~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
+.+++.|++..+---+..+.+..+. +.|++.|+||+
T Consensus 198 ~~~~~~G~~V~~WTvn~~~~~~~l~-~~GVDgIiTD~ 233 (250)
T 3ks6_A 198 AQVQAAGLDFGCWAAHTPSQITKAL-DLGVKVFTTDR 233 (250)
T ss_dssp HHHHHTTCEEEEECCCSHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEEEcCC
Confidence 3444445554443222222233332 33555555554
No 213
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=29.88 E-value=73 Score=24.26 Aligned_cols=108 Identities=8% Similarity=0.062 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcch----HHHHHHHHcCcce-----EEECCCCCchhhhHHHHHHh-hCC------C
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHE----ILPQFVEKHKLGA-----VVIDFMPLREHMGWADTLKK-DLP------K 66 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~----~l~~l~~~~~a~~-----Vv~d~~ylr~~r~w~~~v~~-~l~------~ 66 (131)
..|..++=+.|+++|+++.++.|.+.. ......++.++.. |++-.+ ......-++.+.+ ... +
T Consensus 103 ~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~~~K~~~r~~L~~~gy~iv~~iGD 181 (260)
T 3pct_A 103 IPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD-KSNKSVRFKQVEDMGYDIVLFVGD 181 (260)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS-CSSSHHHHHHHHTTTCEEEEEEES
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC-CCChHHHHHHHHhcCCCEEEEECC
Confidence 357888899999999999999887653 6677777888864 443211 1233444455544 121 0
Q ss_pred CchHHHHHHHHHHhhCCCChhhHHHHHHHHHHHHhhcc-hhccccCCCCcccch
Q psy15173 67 DVPLIQRAVLEVRRVLPKHSKAVDSFCEEAIVRRELAD-NFCYYNKNYDKVEGA 119 (131)
Q Consensus 67 ~~p~~~r~al~v~~~~~~~~~~~~~fleElivrRELa~-Nfc~yn~~YDs~~~~ 119 (131)
+.+ -+. ..+..+..+...+++++. .-+.+. =|.+-||-|=+.+++
T Consensus 182 ~~~---Dl~---~~~~~~~~~~r~a~v~~~--~~~fG~~~ivlPNp~YG~we~~ 227 (260)
T 3pct_A 182 NLN---DFG---DATYKKSNAERRDFVAKN--SKAFGKKFIVLPNTQYGDWEGG 227 (260)
T ss_dssp SGG---GGC---GGGTTCCHHHHHHHHHHT--GGGBTTTEEECCCCSCSHHHHT
T ss_pred ChH---HcC---cccccCCHHHHHHHHHHH--HHHhCCCEEEeCCCCcchhhHH
Confidence 100 000 011223344566677664 222332 247888999887643
No 214
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=29.84 E-value=99 Score=22.67 Aligned_cols=39 Identities=15% Similarity=0.161 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
++-+.+++.|+++.+---+..+.+..+. +.|++.|+||+
T Consensus 201 ~~v~~~~~~G~~v~~WTvn~~~~~~~l~-~~GVdgIiTD~ 239 (252)
T 3qvq_A 201 QQVSDIKAAGYKVLAFTINDESLALKLY-NQGLDAVFSDY 239 (252)
T ss_dssp HHHHHHHHTTCEEEEECCCCHHHHHHHH-HTTCCEEEESS
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHH-HcCCCEEEeCC
Confidence 4456677888888776434344455544 56899999987
No 215
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=29.78 E-value=49 Score=21.48 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEe-------CCcchHHHHHHHHcCcce
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLI-------GGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~-------G~p~~~l~~l~~~~~a~~ 42 (131)
...|.++.+++.+.|+.++.+. .+..+.+.+++++++...
T Consensus 50 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (160)
T 3lor_A 50 VPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKF 96 (160)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred hHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCC
Confidence 3467778888877888887775 256777889999888764
No 216
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=29.71 E-value=73 Score=21.29 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.| ++.+..+.+...+..+.+..+.
T Consensus 88 ~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~ 124 (200)
T 3cnh_A 88 RPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGL 124 (200)
T ss_dssp CHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTG
T ss_pred CccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCH
Confidence 357777778888888 8888887777666666666664
No 217
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=29.24 E-value=52 Score=24.38 Aligned_cols=59 Identities=8% Similarity=0.002 Sum_probs=38.1
Q ss_pred hHHHHHHHHhhc-----CCcEE--EEeCCcchHHHHHHHHcCcceEEECCCCCc-hh----hhHHHHHHhhCC
Q psy15173 5 GLKEVHEDCKKL-----NIEFH--FLIGGAHEILPQFVEKHKLGAVVIDFMPLR-EH----MGWADTLKKDLP 65 (131)
Q Consensus 5 gL~el~~~L~~~-----gI~l~--l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr-~~----r~w~~~v~~~l~ 65 (131)
-|.++.+.+++. |++.. +..|+|.+.|.++++ +++.||....-.. .. -.-.+.|....+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~ 153 (309)
T 3cis_A 83 LIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAH 153 (309)
T ss_dssp HHHHHHHHHHHHCSSSCCSCEEEEEESSCHHHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCS
T ss_pred HHHHHHHHHHHhcccCCCceEEEEEecCCHHHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCC
Confidence 355666666665 76643 467999999999987 7999998754322 11 123455566665
No 218
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=29.21 E-value=1.2e+02 Score=21.96 Aligned_cols=39 Identities=5% Similarity=0.053 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
++-+.+++.|+++.+---+..+.+..+. +.|++.|+||+
T Consensus 198 ~~v~~~~~~G~~v~~wTvn~~~~~~~l~-~~GvdgI~TD~ 236 (247)
T 2otd_A 198 ARVMQLKDAGLRILVYTVNKPQHAAELL-RWGVDCICTDA 236 (247)
T ss_dssp HHHHHHHHTTCEEEEECCCCHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHHHHCCCEEEEEccCCHHHHHHHH-HcCCCEEEeCC
Confidence 4556778889888775433334444544 56899999986
No 219
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=29.20 E-value=82 Score=21.63 Aligned_cols=46 Identities=7% Similarity=-0.131 Sum_probs=31.2
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCc---chHHHHHHHHcCcce-EEECCCCC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGA---HEILPQFVEKHKLGA-VVIDFMPL 50 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p---~~~l~~l~~~~~a~~-Vv~d~~yl 50 (131)
+..+.=+.|++.|+.+++..|.+ ...+.++++++++.. +++...|.
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P~ 77 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYPE 77 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSSTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCCch
Confidence 34555567788899999998876 455677788888765 33333343
No 220
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=29.17 E-value=1.1e+02 Score=21.94 Aligned_cols=40 Identities=10% Similarity=-0.037 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
.++-+.++++|+++.+---+..+.+..+ .+.|++.|+||+
T Consensus 176 ~~~v~~~~~~G~~v~~wtvn~~~~~~~l-~~~GvdgI~TD~ 215 (224)
T 1vd6_A 176 EEAVAGWRKRGLFVVAWTVNEEGEARRL-LALGLDGLIGDR 215 (224)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHHHHH-HHTTCSEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHH-HhcCCCEEEcCC
Confidence 3455677888998877644444445555 457899999996
No 221
>3u5c_M 40S ribosomal protein S12, 40S ribosomal protein S11-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_M
Probab=29.08 E-value=36 Score=23.93 Aligned_cols=44 Identities=11% Similarity=0.213 Sum_probs=34.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc-----hHHHHHHH--HcCcceEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH-----EILPQFVE--KHKLGAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~-----~~l~~l~~--~~~a~~Vv~d~ 47 (131)
.|+++..+.|++....|+++-+|.. ..++.+|+ ++++..++.+.
T Consensus 43 ~G~~et~Kal~kg~a~LvvLA~D~~~~~i~k~i~~lC~~~e~~IP~i~V~s 93 (143)
T 3u5c_M 43 RGLRESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKVPLIKVAD 93 (143)
T ss_dssp ESHHHHHHHHSSTTCSCEECCSCCSTTHHHHHHHHHHHCSSSCCCCCCCSC
T ss_pred EcHHHHHHHHhcCceeEEEEeCCCCHHHHHHHHHHHHhhhhhCCCEEEECC
Confidence 5889999999888888988866542 25678899 99998877763
No 222
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=28.99 E-value=57 Score=24.34 Aligned_cols=38 Identities=5% Similarity=0.045 Sum_probs=28.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCc---chHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGA---HEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p---~~~l~~l~~~~~a~ 41 (131)
.|..++=+.|++.|+++.+..|.+ ...+....+..+..
T Consensus 104 pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 104 PGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 577888889999999999998877 33444555555654
No 223
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=28.77 E-value=95 Score=22.59 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+.=++|++.|+.+++..|.+...+..+.+..+..
T Consensus 44 ~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 44 KETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp HHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 33345667889999999999988888888877765
No 224
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=28.57 E-value=73 Score=21.79 Aligned_cols=36 Identities=11% Similarity=0.037 Sum_probs=29.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-+..+.+.++++++
T Consensus 51 ~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~ 86 (192)
T 2h01_A 51 IIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTP 86 (192)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhH
Confidence 456788888898889998888888777888888876
No 225
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=28.50 E-value=1e+02 Score=24.02 Aligned_cols=45 Identities=4% Similarity=0.028 Sum_probs=34.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
...|.++-+.|++.||+.-++- ||...-.+.+.+.+|+.|=.+-+
T Consensus 141 ~~~L~~~i~~L~~~GIrVSLFI-Dpd~~qI~aA~~~GAd~IELhTG 185 (278)
T 3gk0_A 141 FDAVRAACKQLADAGVRVSLFI-DPDEAQIRAAHETGAPVIELHTG 185 (278)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE-CSCHHHHHHHHHHTCSEEEECCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCEEEEecc
Confidence 3568888899999999877765 45545567889999999865443
No 226
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=28.27 E-value=18 Score=24.84 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=31.4
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce-EEECC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA-VVIDF 47 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~-Vv~d~ 47 (131)
.|.++.+++++.|+.++....|..+.+.+++++++..- ++.|.
T Consensus 55 ~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~ 98 (164)
T 4gqc_A 55 TFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDY 98 (164)
T ss_dssp ESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECT
T ss_pred hhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecC
Confidence 44556677788888888887787788888988888764 34443
No 227
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=28.24 E-value=59 Score=29.35 Aligned_cols=38 Identities=8% Similarity=0.145 Sum_probs=32.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.||.++++.||.......++++.++.
T Consensus 602 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 602 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 639 (1028)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred hhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 45566677899999999999999999999999998875
No 228
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=28.20 E-value=62 Score=18.63 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=21.6
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHH
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVE 36 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~ 36 (131)
-+.+|.++|+++|.+ ..|.-.+.+.++..
T Consensus 14 kV~eLK~eLk~RgL~---~~G~Ka~Li~RL~~ 42 (50)
T 1zrj_A 14 KVNELREELQRRGLD---TRGLKAELAERLQA 42 (50)
T ss_dssp CHHHHHHHHHHTTCC---CCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCC---CCCcHHHHHHHHHH
Confidence 367999999999998 36766666666544
No 229
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=28.02 E-value=63 Score=18.66 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=21.4
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHH
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVE 36 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~ 36 (131)
+.+|..+|+++|++ ..|.=.+.+.++..
T Consensus 10 V~eLK~~Lk~RGL~---~~G~KadLieRL~~ 37 (51)
T 1h1j_S 10 VVQLKDLLTKRNLS---VGGLKNELVQRLIK 37 (51)
T ss_dssp HHHHHHHHHHTTCC---CCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC---CCCcHHHHHHHHHH
Confidence 67899999999998 36776666666543
No 230
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=27.96 E-value=87 Score=20.44 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=26.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.|+++.+..+.+...+. ..+..+.
T Consensus 87 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~ 123 (207)
T 2go7_A 87 MPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGV 123 (207)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTC
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCc
Confidence 457777788888888888888777666555 6665554
No 231
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=27.73 E-value=85 Score=17.50 Aligned_cols=34 Identities=3% Similarity=0.046 Sum_probs=19.0
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
+.+..-|.++||+|....-+....+.+..++++.
T Consensus 15 ~~~~~~l~~~~i~~~~~di~~~~~~~~~~~~~~~ 48 (75)
T 1r7h_A 15 TATKKALDRAGLAYNTVDISLDDEARDYVMALGY 48 (75)
T ss_dssp HHHHHHHHHTTCCCEEEETTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCC
Confidence 3456667788888877654332233333344443
No 232
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=27.61 E-value=73 Score=21.38 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=30.8
Q ss_pred hhhHHHHHHHHhhcC-CcEEEEeCCcchHHHHHHHHcCc----ceEEEC
Q psy15173 3 QLGLKEVHEDCKKLN-IEFHFLIGGAHEILPQFVEKHKL----GAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~g-I~l~l~~G~p~~~l~~l~~~~~a----~~Vv~d 46 (131)
..|+.++-+.|++.| +++.+..+.+...+....+..+. +.+++.
T Consensus 107 ~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~ 155 (234)
T 3ddh_A 107 LPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM 155 (234)
T ss_dssp CTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE
T ss_pred CccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec
Confidence 356778888888999 99988877766666666665553 445543
No 233
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=27.51 E-value=1.1e+02 Score=20.26 Aligned_cols=33 Identities=9% Similarity=0.005 Sum_probs=19.1
Q ss_pred cEEEEeCCcchHHHHHHHHcCcceEEECCCCCc
Q psy15173 19 EFHFLIGGAHEILPQFVEKHKLGAVVIDFMPLR 51 (131)
Q Consensus 19 ~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr 51 (131)
.+++..|+-.+.+...+.-.++.+|+...+..+
T Consensus 54 ~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~ 86 (139)
T 2ioj_A 54 AALVTGGDRSDLLLTALEMPNVRCLILTGNLEP 86 (139)
T ss_dssp EEEEEETTCHHHHHHHTTCTTEEEEEEETTCCC
T ss_pred EEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCC
Confidence 466666887776655443135666665555443
No 234
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=27.50 E-value=1.2e+02 Score=19.49 Aligned_cols=43 Identities=12% Similarity=0.160 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHhh----cCCcEEEEeCCc----chHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKK----LNIEFHFLIGGA----HEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~----~gI~l~l~~G~p----~~~l~~l~~~~~a~~Vv~ 45 (131)
+..|.++.+++.+ .|+.++.+.-|+ .+.+.+++++++..-.+.
T Consensus 43 ~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l 93 (164)
T 2ggt_A 43 LEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGL 93 (164)
T ss_dssp HHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEE
Confidence 3457777777776 377777765444 556788888877664443
No 235
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=27.39 E-value=1.1e+02 Score=23.56 Aligned_cols=44 Identities=18% Similarity=0.054 Sum_probs=34.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
..|.++-+.|++.||+.-++- ||...-.+.+++.||+.|=..-+
T Consensus 111 ~~L~~~i~~L~~~GIrVSLFI-Dpd~~qi~aA~~~GAd~IELhTG 154 (260)
T 3o6c_A 111 AKLKQSIEKLQNANIEVSLFI-NPSLEDIEKSKILKAQFIELHTG 154 (260)
T ss_dssp TTHHHHHHHHHHTTCEEEEEE-CSCHHHHHHHHHTTCSEEEECCH
T ss_pred HHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCCCEEEEech
Confidence 467888899999999877765 45545568889999999866554
No 236
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=27.34 E-value=95 Score=19.94 Aligned_cols=40 Identities=10% Similarity=0.188 Sum_probs=25.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc----hHHHHHHHHcCcceE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH----EILPQFVEKHKLGAV 43 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~----~~l~~l~~~~~a~~V 43 (131)
.|..++.+.+++....|+++-.|.. ..++.+|..+++..+
T Consensus 25 ~G~~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~ 68 (104)
T 4a18_G 25 LGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIH 68 (104)
T ss_dssp ESHHHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred ECHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEE
Confidence 3677777777777777777755543 234556666666655
No 237
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=27.33 E-value=1.1e+02 Score=20.46 Aligned_cols=52 Identities=10% Similarity=0.153 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhcCC---cEEEEeCCc---ch---HHHHHHHHcCcceEEECCCCCchhhhH
Q psy15173 4 LGLKEVHEDCKKLNI---EFHFLIGGA---HE---ILPQFVEKHKLGAVVIDFMPLREHMGW 56 (131)
Q Consensus 4 ~gL~el~~~L~~~gI---~l~l~~G~p---~~---~l~~l~~~~~a~~Vv~d~~ylr~~r~w 56 (131)
..+.++-+.|++.|. ++ +.=|.+ .+ ...+.+++.+++.++.+..+....-.|
T Consensus 69 ~~~~~~i~~l~~~g~~~i~v-~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~~~~~~~ 129 (137)
T 1ccw_A 69 IDCKGLRQKCDEAGLEGILL-YVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPEVGIAD 129 (137)
T ss_dssp HHHTTHHHHHHHTTCTTCEE-EEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEE-EEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCHHHHHHH
Confidence 345667777877764 33 334543 22 236778899999998888754443333
No 238
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=27.27 E-value=1.2e+02 Score=19.21 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=36.7
Q ss_pred HHHHHHHhhcCCcEEE-EeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHhhCCCCch
Q psy15173 7 KEVHEDCKKLNIEFHF-LIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l-~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~~l~~~~p 69 (131)
..+...|.+.|-..++ ...+..+. .+.+++...+.|++|.. |........+.+.+..+ .+|
T Consensus 29 ~~l~~~L~~~~~~~~v~~~~~~~~a-~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~-~~~ 91 (152)
T 3eul_A 29 EGVVRALSLSGSVNVVGEADDGAAA-LELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYEL-PTR 91 (152)
T ss_dssp HHHHHHHHHHSSEEEEEEESSHHHH-HHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTC-SCE
T ss_pred HHHHHHHhhCCCeEEEEEeCCHHHH-HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCC-CCe
Confidence 4566777777743333 34455544 45556678999999976 34445566666665443 344
No 239
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=27.26 E-value=61 Score=22.36 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-++.+...++++++
T Consensus 54 ~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~ 89 (197)
T 1qmv_A 54 IIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTP 89 (197)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
Confidence 346788888898889999888888877788888765
No 240
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=27.15 E-value=1.2e+02 Score=18.88 Aligned_cols=61 Identities=8% Similarity=0.006 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCcEEEE-eCCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 7 KEVHEDCKKLNIEFHFL-IGGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~-~G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
..+...|...|.-..+. -.+..+ ..+++++...+.|++|..- ....-...+.+.+..+ .+|
T Consensus 17 ~~l~~~l~~~~~~~~v~~~~~~~~-al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~-~~~ 79 (133)
T 3b2n_A 17 QAMVQLIKLHGDFEILADTDNGLD-AMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHL-NIK 79 (133)
T ss_dssp HHHHHHHHHHSSEEEEEEESCHHH-HHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTC-SCE
T ss_pred HHHHHHHhhCCCcEEEEEcCCHHH-HHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCC-CCc
Confidence 34556666666333333 344444 4455566789999999763 3344555666665433 355
No 241
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=27.05 E-value=1.3e+02 Score=19.34 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=28.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcch----HHHHHHHHcCcceE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHE----ILPQFVEKHKLGAV 43 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~----~l~~l~~~~~a~~V 43 (131)
.|..++.+.+++-...|+++-.|..+ .++.+|..+++..+
T Consensus 25 ~G~~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~ 68 (105)
T 3u5e_c 25 LGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVY 68 (105)
T ss_dssp ESHHHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred ECHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEE
Confidence 46778888888877888887655433 35667777777766
No 242
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=26.69 E-value=1.4e+02 Score=21.34 Aligned_cols=45 Identities=16% Similarity=0.030 Sum_probs=32.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeC------CcchHHHHHHHHcCcceEEECCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIG------GAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G------~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
..+.++.+.|++.|+.+..... +.-....++|++.++..|++.-.
T Consensus 63 ~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 63 QTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 4578899999999998776531 11234567899999999998743
No 243
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=26.51 E-value=76 Score=22.56 Aligned_cols=36 Identities=8% Similarity=0.016 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
...|.++.+++++.|+.++.+.-|..+.+.+++++.
T Consensus 72 ~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~ 107 (213)
T 2i81_A 72 IIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTP 107 (213)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346888888998899999888888777888888866
No 244
>1exn_A 5'-exonuclease, 5'-nuclease; hydrolase; 2.50A {Enterobacteria phage T5} SCOP: a.60.7.1 c.120.1.2 PDB: 1ut5_A 1ut8_A 1xo1_A
Probab=26.44 E-value=88 Score=24.24 Aligned_cols=33 Identities=9% Similarity=0.120 Sum_probs=26.9
Q ss_pred HHHHHHHHhh--cCCcEEEEeC-CcchHHHHHHHHc
Q psy15173 6 LKEVHEDCKK--LNIEFHFLIG-GAHEILPQFVEKH 38 (131)
Q Consensus 6 L~el~~~L~~--~gI~l~l~~G-~p~~~l~~l~~~~ 38 (131)
+..+++-|+. .|||.+...| .+.+++..++++.
T Consensus 104 ~~~ikell~~~~~gip~i~~~g~EADDviatLa~~~ 139 (290)
T 1exn_A 104 FEYLKDAFELCKTTFPTFTIRGVEADDMAAYIVKLI 139 (290)
T ss_dssp HHHHHHHHHHHTTTSCEECCTTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCcEEEECCcCHHHHHHHHHHHH
Confidence 5567777888 9999988888 7888888888763
No 245
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=26.34 E-value=1.8e+02 Score=21.55 Aligned_cols=58 Identities=10% Similarity=0.037 Sum_probs=38.6
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCc-chHHHHHHHHcC-cceEEECCCCCch---------hhhHHHHHHh
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGA-HEILPQFVEKHK-LGAVVIDFMPLRE---------HMGWADTLKK 62 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p-~~~l~~l~~~~~-a~~Vv~d~~ylr~---------~r~w~~~v~~ 62 (131)
.+..+-+.++++|.|+.+..+.. ...+.++++++. ...|+...+-... ...|.+.+..
T Consensus 123 ~~~~~~~~~~~~glpv~ih~~~~~l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~ 191 (303)
T 4do7_A 123 DFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRE 191 (303)
T ss_dssp HHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHH
Confidence 45566677889999999876654 356788999985 6666655553321 3457765543
No 246
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=26.28 E-value=63 Score=24.21 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=23.5
Q ss_pred HHHhhcCCcEEEEeCCcchHHHHHH--HHcC
Q psy15173 11 EDCKKLNIEFHFLIGGAHEILPQFV--EKHK 39 (131)
Q Consensus 11 ~~L~~~gI~l~l~~G~p~~~l~~l~--~~~~ 39 (131)
++|++.|+.|++..|.+...+..+. ++.+
T Consensus 55 ~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 55 KEAIEKGYMVSICTGRSKVGILSAFGEENLK 85 (301)
T ss_dssp HHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence 4567789999999999888788887 7655
No 247
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=25.98 E-value=80 Score=28.51 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.||.+++..||+......++++.+..
T Consensus 607 ~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 607 ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644 (1034)
T ss_pred hhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 34556667889999999999999999999999988873
No 248
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=25.92 E-value=1.1e+02 Score=22.20 Aligned_cols=36 Identities=14% Similarity=-0.009 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
..+.=++|++.|+.+++..|.+...+..+.++.+..
T Consensus 44 ~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 44 YMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 344445667889999999999988888887766543
No 249
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=25.89 E-value=72 Score=24.34 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcc----hHHHHHHHHcCcc-----eEEECCCCCchhhhHHHHHHhh-CC------C
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAH----EILPQFVEKHKLG-----AVVIDFMPLREHMGWADTLKKD-LP------K 66 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~----~~l~~l~~~~~a~-----~Vv~d~~ylr~~r~w~~~v~~~-l~------~ 66 (131)
..|..++=+.|+++|+++.++.|.+. +......++.++. .|++... ......-++.+.+. .. +
T Consensus 103 ~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~~~K~~~r~~l~~~Gy~iv~~vGD 181 (262)
T 3ocu_A 103 VPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD-KSAKAARFAEIEKQGYEIVLYVGD 181 (262)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS-CSCCHHHHHHHHHTTEEEEEEEES
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC-CCChHHHHHHHHhcCCCEEEEECC
Confidence 35788899999999999999987765 3666777778886 4554322 22334444555443 11 0
Q ss_pred Cch-HHHHHHHHHHhhCCCChhhHHHHHHHHHHHHhhcc-hhccccCCCCcccch
Q psy15173 67 DVP-LIQRAVLEVRRVLPKHSKAVDSFCEEAIVRRELAD-NFCYYNKNYDKVEGA 119 (131)
Q Consensus 67 ~~p-~~~r~al~v~~~~~~~~~~~~~fleElivrRELa~-Nfc~yn~~YDs~~~~ 119 (131)
+.+ |. ..+..+..+...+++++. .-+... =|.+-||.|=+.+++
T Consensus 182 ~~~Dl~-------~~~~~~~~~~r~a~v~~~--~~~fG~~~ivlPNp~YG~we~~ 227 (262)
T 3ocu_A 182 NLDDFG-------NTVYGKLNADRRAFVDQN--QGKFGKTFIMLPNANYGGWEGG 227 (262)
T ss_dssp SGGGGC-------STTTTCCHHHHHHHHHHT--GGGBTTTEEECCCSSCSHHHHT
T ss_pred ChHHhc-------cccccCCHHHHHHHHHHH--HHHhCCCEEEeCCCCccchhHH
Confidence 100 00 011123334566677664 222332 247889999887643
No 250
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=25.85 E-value=1.8e+02 Score=21.25 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=35.8
Q ss_pred hHHHHHHHHhhcCCcEEEEeC----------Ccc--hHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIG----------GAH--EILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLP 65 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G----------~p~--~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~ 65 (131)
-++++.+.+++.|+++++.-+ ++. +.+.+.+.+.+|+.|.++.. ......+++.+.++
T Consensus 133 ~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~---~~~~~l~~i~~~~~ 202 (273)
T 2qjg_A 133 DLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT---GDIDSFRDVVKGCP 202 (273)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC---SSHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHhCC
Confidence 356677777888999887541 121 22336788899999988842 22233445555553
No 251
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=25.71 E-value=79 Score=23.48 Aligned_cols=36 Identities=8% Similarity=0.079 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.++++++|+.++.+.-|+.+...++++++
T Consensus 111 l~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~ 146 (254)
T 3tjj_A 111 IIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTP 146 (254)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHH
Confidence 356888889999999998888888888888888765
No 252
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=25.70 E-value=1.1e+02 Score=20.69 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC--------cchHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG--------AHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~--------p~~~l~~l~~~~~a~~Vv~ 45 (131)
+..|.++.+++.+.|+.++.+.-+ ..+.+.++++++++.--+.
T Consensus 68 ~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~ 118 (185)
T 2gs3_A 68 YTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMF 118 (185)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEB
T ss_pred HHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeee
Confidence 346788888998889888877532 2456888999998875544
No 253
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=25.66 E-value=27 Score=26.31 Aligned_cols=42 Identities=21% Similarity=0.537 Sum_probs=29.6
Q ss_pred CcEEEEeCCcchHHHHHHHH--cCcceEEEC-CCCCchhhhHHHH
Q psy15173 18 IEFHFLIGGAHEILPQFVEK--HKLGAVVID-FMPLREHMGWADT 59 (131)
Q Consensus 18 I~l~l~~G~p~~~l~~l~~~--~~a~~Vv~d-~~ylr~~r~w~~~ 59 (131)
+.+.+..||..+.++++... ..+++|+.| +.|.+.++-|...
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~ 194 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQN 194 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHH
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHH
Confidence 45667789998888776321 158999999 6677776666654
No 254
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=25.55 E-value=1.4e+02 Score=23.71 Aligned_cols=45 Identities=16% Similarity=0.319 Sum_probs=35.8
Q ss_pred HhhcCCcEEEEeCCcchHHHHHHHHcCcceEEEC-CCCCchhhhHH
Q psy15173 13 CKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVID-FMPLREHMGWA 57 (131)
Q Consensus 13 L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d-~~ylr~~r~w~ 57 (131)
+.+.|++.++..|..++.|.++....+.+++|.. ..++...++|.
T Consensus 224 a~~~Gv~v~I~~g~~~~~L~~~l~g~~~GT~i~~~~~~~~~rk~w~ 269 (367)
T 2j5v_A 224 ACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWI 269 (367)
T ss_dssp HHHTTCEEEEEETTSTTHHHHHHHTCCCSEEECCCSSCCCGGGGGG
T ss_pred HHHcCCCEEEEcCCCchHHHHHhcCCCCcEEEEcCccccchhheee
Confidence 4567999888888777778888877678888865 66777788998
No 255
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=25.38 E-value=94 Score=20.96 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------CcchHHHHHHHH-cCcceEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------GAHEILPQFVEK-HKLGAVV 44 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------~p~~~l~~l~~~-~~a~~Vv 44 (131)
+..|.++.+++.+.|+.++.+.. +..+.+.+++++ +++.--+
T Consensus 57 ~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~ 107 (180)
T 3kij_A 57 YLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPI 107 (180)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCB
T ss_pred HHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCce
Confidence 34688888999888888777642 355678899998 8876444
No 256
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=25.34 E-value=2.2e+02 Score=21.50 Aligned_cols=46 Identities=13% Similarity=-0.073 Sum_probs=33.4
Q ss_pred HHHHHHHHhhcCCcEEEE-eCCc-chHHHHHHHHcCcceEEECCCCCc
Q psy15173 6 LKEVHEDCKKLNIEFHFL-IGGA-HEILPQFVEKHKLGAVVIDFMPLR 51 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~-~G~p-~~~l~~l~~~~~a~~Vv~d~~ylr 51 (131)
-..+....+.+|++.++. ..+. ...-.+.++.++|..++++..+..
T Consensus 84 g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~ 131 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSF 131 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTT
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhh
Confidence 345667778899998875 3333 344567788999999999887753
No 257
>1q2h_A APS, adaptor protein with pleckstrin homology and SRC homology 2 domains; signal transduction, signaling protein; 1.70A {Homo sapiens} SCOP: a.34.4.1
Probab=25.33 E-value=24 Score=22.02 Aligned_cols=26 Identities=23% Similarity=0.663 Sum_probs=17.2
Q ss_pred Hhhcchhccc---cCCCCcccchHHHHHH
Q psy15173 100 RELADNFCYY---NKNYDKVEGAFDWAKK 125 (131)
Q Consensus 100 RELa~Nfc~y---n~~YDs~~~~p~WA~~ 125 (131)
+++|..||.| ||.|++..+-++-.++
T Consensus 20 ~DfA~~~~~f~~~nP~~~~~~s~~~Fs~~ 48 (69)
T 1q2h_A 20 VDFAHKFCRFLRDNPAYDTPDAGASFSRH 48 (69)
T ss_dssp HHHHHHHHHHHHHCGGGCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccccCcccHHHHHHH
Confidence 4677777777 6888766555555544
No 258
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=25.32 E-value=69 Score=26.02 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=26.9
Q ss_pred CchhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 1 MSQLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 1 ~~~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
++.+++..|.+.+++.||+|+---=|+. -.+++.++++..+
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~--svd~l~~~~vd~~ 138 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEG--SADLLQSTSPSAF 138 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHH--HHHHHHTTCCSCE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHH--HHHHHHhcCCCEE
Confidence 4678999999999999998754322332 2355666655443
No 259
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=25.31 E-value=1e+02 Score=22.95 Aligned_cols=60 Identities=8% Similarity=-0.026 Sum_probs=38.2
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcc-hHHHHHHHHcCcceEEECCCCCch----hhhHHHHHHhh
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAH-EILPQFVEKHKLGAVVIDFMPLRE----HMGWADTLKKD 63 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~-~~l~~l~~~~~a~~Vv~d~~ylr~----~r~w~~~v~~~ 63 (131)
..+..+-+.++++|.|+.+..+... ..+.++++++....|+..++-... ...|.+.+.+.
T Consensus 137 ~~~~~~~~~a~~~glpv~iH~~~~~l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l 201 (294)
T 4i6k_A 137 PDWQKFLRNVESLNWQVELHAPPKYLVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSL 201 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeeCcchHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 3456666778899999988766543 556778888886555555543221 22466665543
No 260
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=25.18 E-value=1.5e+02 Score=19.81 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCcEEEE-eCCcchHHHHHHHHcCcceEEECCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFL-IGGAHEILPQFVEKHKLGAVVIDFMPLRE 52 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~-~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~ 52 (131)
..++-++|.+.|++.++. .|...+.+.+.+++.++. |+-+..+...
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~-vvGpnc~gv~ 136 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLI-IVANRCMMRE 136 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCE-EEESCCHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCE-EEcCCchhhc
Confidence 344555666667664443 344556666777766665 4545544433
No 261
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=25.13 E-value=28 Score=23.50 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=29.1
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcce
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGA 42 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~ 42 (131)
.|.++.+++.+.|+.++....|+.+.+.+++++++..-
T Consensus 52 ~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~ 89 (157)
T 4g2e_A 52 TFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNF 89 (157)
T ss_dssp CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCS
T ss_pred hcccccccccccCceEeeecccchhHHHHHHHHcCCcE
Confidence 44556667778888888777788888889999888764
No 262
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=25.11 E-value=68 Score=23.10 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=27.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
.+.|.+++++|.+.||.|.+...+. .....|++|.+
T Consensus 87 ~~~L~~ik~sL~~~gI~l~~~fs~t----------iHDR~I~~dnG 122 (163)
T 4a5z_A 87 SRGLQEIEESLRSHGVLLEVQYSSS----------IHDREIRFNNG 122 (163)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT----------CCCCEEEETTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCC----------ccceEEEecCC
Confidence 4689999999999999999876432 25666777764
No 263
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=25.11 E-value=24 Score=25.54 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=22.3
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK 39 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~ 39 (131)
.+.-+.|++.|+.+.+..|.+ ..+..+.++.+
T Consensus 26 ~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~ 57 (261)
T 2rbk_A 26 IEALEAAHAKGLKIFIATGRP-KAIINNLSELQ 57 (261)
T ss_dssp HHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred HHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence 334456778899999999988 66655555444
No 264
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=24.97 E-value=1.3e+02 Score=21.19 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHhhc--CCcEEEEeCCcch-----------HHHHHHHHcCcceEEECCCCCchhhhHHH
Q psy15173 3 QLGLKEVHEDCKKL--NIEFHFLIGGAHE-----------ILPQFVEKHKLGAVVIDFMPLREHMGWAD 58 (131)
Q Consensus 3 ~~gL~el~~~L~~~--gI~l~l~~G~p~~-----------~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~ 58 (131)
..||.+-.+.|.+. ...|=++-.+..+ .|.+||.+++|..|=.|.. +-..+|.-
T Consensus 27 ~~Gl~EaaKaLdk~p~~a~lCvLA~dcd~e~D~a~~~y~kLveAlC~E~~I~lIkVdd~--kkLgew~G 93 (146)
T 3cg6_A 27 TAGVYESAKVLNVDPDNVTFCVLAADEEDEGDIALQIHFTLIQAFCCENDIDIVRVGDV--QRLAAIVG 93 (146)
T ss_dssp EESHHHHHHHHHHCGGGEEEEEEECCTGGGGCHHHHHHHHHHHHHHHHTTCEEEEECCH--HHHHHHC-
T ss_pred cccHHHHHHHHhcCCCeEEEEEecCCCccccchhHHHHHHHHHHHHhhcCCCeEEeCch--hHHHHHhC
Confidence 36899999999886 7777777544431 5789999999999888753 33445544
No 265
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=24.93 E-value=1e+02 Score=20.59 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=28.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
.|..++-+.|++.|+++.+..+.+...+....+..+.
T Consensus 92 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~ 128 (225)
T 3d6j_A 92 PDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMP 128 (225)
T ss_dssp TTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSC
T ss_pred cCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCc
Confidence 5677777888888999988888777777777776664
No 266
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.67 E-value=54 Score=19.30 Aligned_cols=26 Identities=12% Similarity=0.331 Sum_probs=19.4
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHH
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQF 34 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l 34 (131)
-.+|+..|.+.|.|. .|+.++.+.++
T Consensus 13 ~~ELQaKLaE~GAPi---~g~REElvdRL 38 (58)
T 2do5_A 13 AQELQAKLAEIGAPI---QGNREELVERL 38 (58)
T ss_dssp HHHHHHHHHHHTCCC---CSCHHHHHHHH
T ss_pred CHHHHHHHHHhCCcc---cccHHHHHHHH
Confidence 368999999999984 67766655544
No 267
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=24.67 E-value=91 Score=21.66 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=27.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.| ++.+..+.+...+....+..+.
T Consensus 98 ~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 98 YPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp CTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 357778888888888 8888877776666666666554
No 268
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.48 E-value=1.3e+02 Score=18.62 Aligned_cols=55 Identities=13% Similarity=0.215 Sum_probs=36.0
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHh
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKK 62 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~ 62 (131)
...+...|++.|.... ...+..+. .+.+++...+.|++|.. |........+.+.+
T Consensus 19 ~~~l~~~l~~~g~~v~-~~~~~~~a-~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~ 74 (140)
T 3grc_A 19 ARLLNLMLEKGGFDSD-MVHSAAQA-LEQVARRPYAAMTVDLNLPDQDGVSLIRALRR 74 (140)
T ss_dssp HHHHHHHHHHTTCEEE-EECSHHHH-HHHHHHSCCSEEEECSCCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEE-EECCHHHH-HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3456777888887743 33455444 45567788999999976 34445566666665
No 269
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=24.33 E-value=80 Score=22.90 Aligned_cols=64 Identities=6% Similarity=-0.030 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC--cceEE-------ECCCC-CchhhhHHHHHHhhCCCCchHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK--LGAVV-------IDFMP-LREHMGWADTLKKDLPKDVPLI 71 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~--a~~Vv-------~d~~y-lr~~r~w~~~v~~~l~~~~p~~ 71 (131)
.||.+-+..+|.+.|||..+..... +..+.++-+ ++.|+ .|-+- -+...--..-+|+... +||+
T Consensus 16 ~qG~rlta~eL~~~gI~vtlI~Dsa---~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~Ak~~~--vPf~ 89 (191)
T 1w2w_B 16 NQGSRLTAYELVYDKIPSTLITDSS---IAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVICKQFG--IKFF 89 (191)
T ss_dssp THHHHTHHHHHHHHTCCBEEBCGGG---HHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHHHHHT--CEEE
T ss_pred cccHHHHHHHHHHcCCCEEEEechH---HHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcC--CCEE
Confidence 5787778999999999998875444 345555533 44444 44322 2334444444555553 6653
No 270
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=24.31 E-value=1.3e+02 Score=18.40 Aligned_cols=61 Identities=5% Similarity=0.025 Sum_probs=35.8
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|++.|..... ..++.+ ..+.+++...+.|++|... ....-...+.+.+..+ .+|
T Consensus 20 ~~~l~~~L~~~g~~v~~-~~~~~~-a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~-~~~ 81 (130)
T 3eod_A 20 RSLLDSWFSSLGATTVL-AADGVD-ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGD-QTP 81 (130)
T ss_dssp HHHHHHHHHHTTCEEEE-ESCHHH-HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTC-CCC
T ss_pred HHHHHHHHHhCCceEEE-eCCHHH-HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCC-CCC
Confidence 34566778888876543 345544 4455677789999999763 3334455555555433 344
No 271
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.28 E-value=66 Score=18.31 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=8.8
Q ss_pred hHHHHHHHHH--HHHhhc
Q psy15173 88 AVDSFCEEAI--VRRELA 103 (131)
Q Consensus 88 ~~~~fleEli--vrRELa 103 (131)
..++|-+|++ |||||.
T Consensus 8 dle~~KqEIL~E~RkElq 25 (45)
T 1use_A 8 DLQRVKQELLEEVKKELQ 25 (45)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 3555555555 566653
No 272
>1z21_A YOP proteins translocation protein H; plague, type III secretion, YOPR, cell invasion; 1.50A {Yersinia pestis} SCOP: a.243.1.2
Probab=24.23 E-value=34 Score=23.06 Aligned_cols=12 Identities=33% Similarity=0.570 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhhc
Q psy15173 91 SFCEEAIVRRELA 103 (131)
Q Consensus 91 ~fleElivrRELa 103 (131)
.||+||+ ||||-
T Consensus 94 eyL~~La-RrELm 105 (112)
T 1z21_A 94 PYLSELI-NKELM 105 (112)
T ss_dssp HHHHHHH-HHHHH
T ss_pred HHHHHHH-HHHHH
Confidence 4999986 88983
No 273
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=24.20 E-value=64 Score=28.82 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=33.0
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcc
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLG 41 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~ 41 (131)
.+..+.=+.|++.||..+++.||.......++++.++.
T Consensus 491 ~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 491 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528 (885)
T ss_dssp HHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred hhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence 45567778899999999999999999999999998884
No 274
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=24.06 E-value=1.4e+02 Score=22.88 Aligned_cols=45 Identities=11% Similarity=0.058 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM 48 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ 48 (131)
...|.+.-+.|++.||+..++-. |...-.+.+.+.||..|=..-+
T Consensus 113 ~~~l~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GA~~IELhTG 157 (243)
T 1m5w_A 113 RDKMRDACKRLADAGIQVSLFID-ADEEQIKAAAEVGAPFIEIHTG 157 (243)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEEEECH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCcCEEEEech
Confidence 45688899999999999888754 4444567788999999855443
No 275
>3i8o_A KH domain-containing protein MJ1533; APC89320.5, methanocaldococcus jannaschii DSM 2661, structural genomics, PSI-2; 2.64A {Methanocaldococcus jannaschii}
Probab=24.05 E-value=1.1e+02 Score=21.26 Aligned_cols=43 Identities=12% Similarity=0.257 Sum_probs=27.7
Q ss_pred hhHHHHHH---HHhhcCCcEEEEe-------------CCcchHHHHHHHHcCcceEEECC
Q psy15173 4 LGLKEVHE---DCKKLNIEFHFLI-------------GGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 4 ~gL~el~~---~L~~~gI~l~l~~-------------G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
+||..|++ ...+.+|++.+.. |+....+.++|++.++. |+||.
T Consensus 55 rGLe~L~~L~~~~~~~~i~vei~~~r~~~~~i~~~~~~~vD~~l~~lA~~~~a~-lvTnD 113 (142)
T 3i8o_A 55 KGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSI-LLTSD 113 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEESCCCCHHHHHSCCSSSHHHHHHHHHHHTTCE-EEESC
T ss_pred HHHHHHHHHHHHhhccCceEEEecccCchhhhccccCCcHHHHHHHHHHHhCCE-EEcCC
Confidence 45555443 2235688888753 33455688999999864 66765
No 276
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=23.96 E-value=85 Score=22.34 Aligned_cols=36 Identities=6% Similarity=-0.035 Sum_probs=28.9
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH 38 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~ 38 (131)
+..|.++.+++++.|+.++.+.-|+.+...++++++
T Consensus 89 ~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~ 124 (222)
T 3ztl_A 89 IIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLD 124 (222)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHh
Confidence 346788888888889988888888877788888764
No 277
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=23.93 E-value=1.5e+02 Score=22.48 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=22.8
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
++-+.++++|++..+---+..+.+.++. +.|++.|+||+
T Consensus 259 ~~v~~~~~~Gl~V~~WTVn~~~~~~~l~-~~GVDgIiTD~ 297 (313)
T 3l12_A 259 ELVAEAHDLGLIVLTWTVNEPEDIRRMA-TTGVDGIVTDY 297 (313)
T ss_dssp HHHHHHHHTTCEEEEBCCCSHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHH-HcCCCEEEeCC
Confidence 4455666777777664333333344443 45788888875
No 278
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=23.81 E-value=1.1e+02 Score=21.84 Aligned_cols=38 Identities=3% Similarity=0.053 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHhhcCC--cEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNI--EFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI--~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.|+ ++.+..+.+...+..+.+..+.
T Consensus 144 ~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl 183 (282)
T 3nuq_A 144 DIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGI 183 (282)
T ss_dssp CHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTC
T ss_pred ChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCc
Confidence 4578888899999999 9999988777777777776665
No 279
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=23.72 E-value=98 Score=23.92 Aligned_cols=43 Identities=16% Similarity=0.283 Sum_probs=31.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeC--CcchH---HHHHHHHcCcceEEEC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIG--GAHEI---LPQFVEKHKLGAVVID 46 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G--~p~~~---l~~l~~~~~a~~Vv~d 46 (131)
.|+.++-..++.....|+|+-+ ||.+. ||.||++.++..++..
T Consensus 130 ~GvneVTklVE~kKAqLVVIA~DVdPiElV~fLPaLC~k~gVPY~iVk 177 (258)
T 3iz5_H 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVK 177 (258)
T ss_dssp ESHHHHHHHHHTTCEEEEEEESCCSSTHHHHHHHHHHTTTTCCEEEES
T ss_pred cccHHHHHHHHcCcceEEEEeCCCChHHHHhHHHHHHHhcCCCeEEEC
Confidence 5788888888887777877754 45443 4788888888877765
No 280
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=23.66 E-value=51 Score=22.91 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=32.5
Q ss_pred HHHhhcCCcEEEEeCCcchHHHHHHH--HcCcceEEECCCCCchhhhHHHHHHhhC
Q psy15173 11 EDCKKLNIEFHFLIGGAHEILPQFVE--KHKLGAVVIDFMPLREHMGWADTLKKDL 64 (131)
Q Consensus 11 ~~L~~~gI~l~l~~G~p~~~l~~l~~--~~~a~~Vv~d~~ylr~~r~w~~~v~~~l 64 (131)
+.|+++||++.+..|+ ..+..+++ ..++. ++... .........+.+.+
T Consensus 46 ~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~~g~---~~K~~~l~~~~~~~ 95 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TEVSV---SDKLATVDEWRKEM 95 (168)
T ss_dssp HHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EECSC---SCHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EEECC---CChHHHHHHHHHHc
Confidence 5778899999999998 55667788 66777 55432 23444555555555
No 281
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=23.63 E-value=76 Score=19.96 Aligned_cols=29 Identities=14% Similarity=0.304 Sum_probs=21.7
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHH
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVE 36 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~ 36 (131)
-+.+|+++|+++|++ ..|.=.+.+.++..
T Consensus 30 kVaeLK~eLk~RGL~---~sG~KaeLIeRL~~ 58 (75)
T 2kvu_A 30 KVAELKQELKLRSLP---VSGTKTELIERLRA 58 (75)
T ss_dssp CHHHHHHHHHHTTCC---CCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCC---CCCCHHHHHHHHHH
Confidence 367999999999988 46776666666543
No 282
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=23.57 E-value=1.4e+02 Score=19.30 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------CcchHHHHHHH-HcCcceEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------GAHEILPQFVE-KHKLGAVV 44 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------~p~~~l~~l~~-~~~a~~Vv 44 (131)
+..|.++.+++.+.|+.++.+.- +..+.+.++++ ++++.--+
T Consensus 51 ~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (170)
T 2p5q_A 51 YAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPI 101 (170)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCB
T ss_pred HHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCcee
Confidence 34678888888888888887753 34567888888 66765433
No 283
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.37 E-value=98 Score=23.53 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCcEEEEe-------C--------CcchHHHHHHHHcCcceEEECC
Q psy15173 7 KEVHEDCKKLNIEFHFLI-------G--------GAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~-------G--------~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
.++-+.+++.|+++.+-. | +|......++..+|++.|.||+
T Consensus 208 ~~~v~~~~~~g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~~l~~~~Gvd~I~TD~ 263 (278)
T 3i10_A 208 PPKIKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLGARILQTDQ 263 (278)
T ss_dssp HHHHHHHHTTTSEEEEECSSGGGBTTCCHHHHHHCHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEecccccccCccchhhccChHHHHHHHHhcCCCCEEEeCC
Confidence 445566777777776622 1 4444555666555777777776
No 284
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=23.27 E-value=1.4e+02 Score=21.15 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCcEEEEe---CCcchHHHHHHHHcCcc
Q psy15173 7 KEVHEDCKKLNIEFHFLI---GGAHEILPQFVEKHKLG 41 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~---G~p~~~l~~l~~~~~a~ 41 (131)
.+.-+.|++.|+++++.. |.+...+.+..++.+..
T Consensus 39 ~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 39 LEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp HHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 344457888999999888 76766666667766543
No 285
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=23.26 E-value=81 Score=22.06 Aligned_cols=62 Identities=18% Similarity=0.076 Sum_probs=38.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcC-----cceEEECCCCC--chhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHK-----LGAVVIDFMPL--REHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~-----a~~Vv~d~~yl--r~~r~w~~~v~~~l 64 (131)
..|+.++-+.|++.|+++.+..+.+...+..+.+..+ .+.+++..... +....-...+++.+
T Consensus 113 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 181 (277)
T 3iru_A 113 IPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALEL 181 (277)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHc
Confidence 3577788888999999999998877666555554433 45555543322 23333444455544
No 286
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.14 E-value=1.2e+02 Score=22.88 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=22.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
.+||+.+.+-+++.|+|++.--=++.. .+++.++ ++.+
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~--~~~l~~~-vd~~ 110 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRH--VELVAKY-SDIL 110 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGG--HHHHHHH-CSEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHh--HHHHHhh-CCEE
Confidence 467777777778888877664444433 3444444 4443
No 287
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=22.91 E-value=1.4e+02 Score=21.68 Aligned_cols=39 Identities=13% Similarity=0.309 Sum_probs=26.4
Q ss_pred HHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 8 EVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 8 el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
++-+.+++.|+++.+--=+..+.+..+. +.|++.|+||+
T Consensus 187 ~~v~~~~~~G~~v~~WTVn~~~~~~~l~-~~GVdgIiTD~ 225 (238)
T 3no3_A 187 DWVKDCKVLGMTSNVWTVDDPKLMEEMI-DMGVDFITTDL 225 (238)
T ss_dssp THHHHHHHTTCEEEEECCCSHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHH-HcCCCEEECCC
Confidence 3456678889988776434344455554 46899999986
No 288
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=22.48 E-value=1.2e+02 Score=17.31 Aligned_cols=20 Identities=5% Similarity=0.170 Sum_probs=13.7
Q ss_pred HHHHHHHhhcCCcEEEEeCC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGG 26 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~ 26 (131)
+.+...|.++|++|....-+
T Consensus 15 ~~~~~~l~~~~i~~~~vdi~ 34 (81)
T 1h75_A 15 HATKRAMENRGFDFEMINVD 34 (81)
T ss_dssp HHHHHHHHHTTCCCEEEETT
T ss_pred HHHHHHHHHCCCCeEEEECC
Confidence 34566777888888776543
No 289
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=22.24 E-value=1.7e+02 Score=20.22 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=28.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceE
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~V 43 (131)
|.+.-+.+.+.|..+++..+...+....+..+.++-+|
T Consensus 61 l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~v 98 (159)
T 1ass_A 61 FKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAV 98 (159)
T ss_dssp HHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTTCEEE
T ss_pred HHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCCCEEE
Confidence 45566677788998888877777778888887776544
No 290
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=22.16 E-value=1.3e+02 Score=24.27 Aligned_cols=64 Identities=19% Similarity=0.117 Sum_probs=39.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE-------ECCCC-CchhhhHHHHHHhhCCCCchHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV-------IDFMP-LREHMGWADTLKKDLPKDVPLI 71 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv-------~d~~y-lr~~r~w~~~v~~~l~~~~p~~ 71 (131)
.+|-+.+..+|.+.|||..+..... +..+.++-+++.|+ .|-+- -+...--..-+|+... +||+
T Consensus 223 ~qGarltA~eL~~~GIpvtlI~Dsa---~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~--vPfy 294 (383)
T 2a0u_A 223 NQGARLTVYECVQEDIPCTLICDGA---ASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHG--VKLY 294 (383)
T ss_dssp THHHHTHHHHHHHTTCCEEEECGGG---HHHHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTT--CCEE
T ss_pred cchHHHHHHHHHHcCCCEEEEehhH---HHHHhhcCCCCEEEECccEEecCCCEeecccHHHHHHHHHHcC--CCEE
Confidence 5787788999999999998876544 44555553344444 34322 2344444555566664 7764
No 291
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=22.03 E-value=1.5e+02 Score=18.45 Aligned_cols=45 Identities=18% Similarity=0.069 Sum_probs=32.7
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCC-cchHHHHHHHHcCcc--eEEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGG-AHEILPQFVEKHKLG--AVVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~-p~~~l~~l~~~~~a~--~Vv~d~ 47 (131)
...|.++.+.+.+.|+.++.+..+ ..+.+.+++++++.. .++.|.
T Consensus 50 ~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~ 97 (148)
T 3hcz_A 50 TPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDS 97 (148)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECT
T ss_pred HHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEecc
Confidence 345778888888888888877544 566788999988875 445544
No 292
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=21.99 E-value=1.5e+02 Score=18.24 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=36.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHh
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKK 62 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~ 62 (131)
...+...|++.|..-+....+..+.+..+......+.|++|.. |........+.+.+
T Consensus 18 ~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~ 75 (129)
T 3h1g_A 18 RRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRS 75 (129)
T ss_dssp HHHHHHHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3456777888887534445566666666655446889999876 33345566666654
No 293
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=21.96 E-value=1.5e+02 Score=19.87 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=32.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------CcchHHHHHHHHcCcceEEE
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------GAHEILPQFVEKHKLGAVVI 45 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------~p~~~l~~l~~~~~a~~Vv~ 45 (131)
+..|.++.+++.+.|+.++.+.- +..+.+.+++++++..--+.
T Consensus 66 ~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~ 116 (183)
T 2obi_A 66 YTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMF 116 (183)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEB
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEE
Confidence 34678888888888888887753 23567888999888876655
No 294
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=21.93 E-value=2.5e+02 Score=22.18 Aligned_cols=62 Identities=10% Similarity=0.067 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCc---------ch---HHHHHHHHcC--cceEEECCCC--CchhhhHHHHHHhhC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGA---------HE---ILPQFVEKHK--LGAVVIDFMP--LREHMGWADTLKKDL 64 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p---------~~---~l~~l~~~~~--a~~Vv~d~~y--lr~~r~w~~~v~~~l 64 (131)
..|..++=+.|++.|+++.+..+.+ .. .+..+++..+ .+.|++..+. .++.......+.+.+
T Consensus 89 ~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l 166 (416)
T 3zvl_A 89 YPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQA 166 (416)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSSHHHHHHHHHS
T ss_pred cccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCHHHHHHHHHHh
Confidence 3678888899999999999988754 22 2556666666 5567765442 334444455555544
No 295
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=21.88 E-value=1.6e+02 Score=19.19 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL 40 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a 40 (131)
..|+.++=+.|++.|+++.+..+.+. .+....+..+.
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 84 FEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 35677777788888888888776553 45556666554
No 296
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=21.88 E-value=1.3e+02 Score=20.19 Aligned_cols=41 Identities=7% Similarity=0.135 Sum_probs=28.5
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC--------cchHHHHHHHH-cCcceEE
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG--------AHEILPQFVEK-HKLGAVV 44 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~--------p~~~l~~l~~~-~~a~~Vv 44 (131)
..|.++.+++.+.|+.++.+.-+ ..+.+.+++++ +++.--+
T Consensus 69 p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~ 118 (181)
T 2p31_A 69 RALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPM 118 (181)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCB
T ss_pred HHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCcee
Confidence 45778888888888888777532 34567888887 6765433
No 297
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=21.87 E-value=31 Score=23.68 Aligned_cols=23 Identities=9% Similarity=0.167 Sum_probs=11.7
Q ss_pred hHHHHHHHHhhc-CCcEEEEeCCc
Q psy15173 5 GLKEVHEDCKKL-NIEFHFLIGGA 27 (131)
Q Consensus 5 gL~el~~~L~~~-gI~l~l~~G~p 27 (131)
|..++=+.|++. |+++.+..+.+
T Consensus 77 g~~e~L~~L~~~~g~~~~ivT~~~ 100 (193)
T 2i7d_A 77 GALDAVREMNDLPDTQVFICTSPL 100 (193)
T ss_dssp THHHHHHHHHTSTTEEEEEEECCC
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCC
Confidence 444555555555 55555554443
No 298
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.85 E-value=1.5e+02 Score=18.32 Aligned_cols=55 Identities=11% Similarity=0.031 Sum_probs=34.5
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHh
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKK 62 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~ 62 (131)
...+...|+..|.... ...+..+ ..+.+++...+.|++|..- ....-...+.+.+
T Consensus 20 ~~~l~~~L~~~g~~v~-~~~~~~~-a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~ 75 (142)
T 3cg4_A 20 RIAVKTILSDAGFHII-SADSGGQ-CIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILD 75 (142)
T ss_dssp HHHHHHHHHHTTCEEE-EESSHHH-HHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEE-EeCCHHH-HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4566777888887543 3344444 4456667789999999763 3344455666655
No 299
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=21.82 E-value=1.4e+02 Score=18.06 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=35.2
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCC-CCchhhhHHHHHHhh
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFM-PLREHMGWADTLKKD 63 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~-ylr~~r~w~~~v~~~ 63 (131)
...+...|++.|..... ..+..+ ..+.+++...+.|++|.. |....-...+.+.+.
T Consensus 16 ~~~l~~~L~~~g~~v~~-~~~~~~-a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 72 (127)
T 3i42_A 16 AETFKELLEMLGFQADY-VMSGTD-ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRAL 72 (127)
T ss_dssp HHHHHHHHHHTTEEEEE-ESSHHH-HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCEEE-ECCHHH-HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 45567778888774433 344444 445567778999999976 334455566666554
No 300
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=21.77 E-value=1.2e+02 Score=20.23 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=30.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCc--chHHHHHHHHcCcc--eEEECC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGA--HEILPQFVEKHKLG--AVVIDF 47 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p--~~~l~~l~~~~~a~--~Vv~d~ 47 (131)
..|.++.+++.+.|+.++.+..+. .+.+.++++++++. .++.|.
T Consensus 80 ~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (186)
T 1jfu_A 80 PALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQ 127 (186)
T ss_dssp HHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECT
T ss_pred HHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECC
Confidence 456777787777788887776554 36788999998873 345543
No 301
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.76 E-value=1.7e+02 Score=18.92 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=32.2
Q ss_pred chhhHHHHHHHHhhcCCcEEEE-eCCcchHHHHH---HHHcCcce-EEECCCCCch
Q psy15173 2 SQLGLKEVHEDCKKLNIEFHFL-IGGAHEILPQF---VEKHKLGA-VVIDFMPLRE 52 (131)
Q Consensus 2 ~~~gL~el~~~L~~~gI~l~l~-~G~p~~~l~~l---~~~~~a~~-Vv~d~~ylr~ 52 (131)
|.+.++++-++++.-|-||+++ .|.....+.+| +++.+++- |.-.-+|...
T Consensus 36 ssqdirdiiksmkdngkplvvfvngasqndvnefqneakkegvsydvlkstdpeel 91 (112)
T 2lnd_A 36 SSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEEL 91 (112)
T ss_dssp SHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHH
T ss_pred chhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHH
Confidence 5677888889999999998886 45444444444 55556553 3344444433
No 302
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=21.76 E-value=1.9e+02 Score=20.68 Aligned_cols=62 Identities=11% Similarity=0.023 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHhhcCCc--EEEEeCCcchHHHHHHHHcCcceEEECCCCCchhhhHHHHHHhhCC
Q psy15173 3 QLGLKEVHEDCKKLNIE--FHFLIGGAHEILPQFVEKHKLGAVVIDFMPLREHMGWADTLKKDLP 65 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~--l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~~v~~~l~ 65 (131)
-+.+...++.+++.|++ ..+..|+..+.++.+-.....+.|+.|.. ......+.+.+.+.|.
T Consensus 98 ~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~-~~~~~~~l~~~~~~Lk 161 (248)
T 3tfw_A 98 AHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDAD-KPNNPHYLRWALRYSR 161 (248)
T ss_dssp HHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC-GGGHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc-hHHHHHHHHHHHHhcC
Confidence 34566667777777765 67778988776665522235888998875 3334455566666664
No 303
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.75 E-value=1.2e+02 Score=20.48 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=24.8
Q ss_pred hhhHHHHHHHHhhcC--CcEEEEeC----CcchHHHHHHHHcCcc
Q psy15173 3 QLGLKEVHEDCKKLN--IEFHFLIG----GAHEILPQFVEKHKLG 41 (131)
Q Consensus 3 ~~gL~el~~~L~~~g--I~l~l~~G----~p~~~l~~l~~~~~a~ 41 (131)
...|.++++.+.+.| +.++.+.= |..+.+.++++++++.
T Consensus 52 ~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~ 96 (170)
T 4hde_A 52 TANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTED 96 (170)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSC
T ss_pred HHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCC
Confidence 456777888887665 44444432 4456778888877664
No 304
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=21.71 E-value=80 Score=21.06 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=28.8
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc-c-eEEEC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL-G-AVVID 46 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a-~-~Vv~d 46 (131)
.|.++.+++ .|+.++.+.-|..+.+.+++++++. . .++.|
T Consensus 69 ~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D 110 (171)
T 2yzh_A 69 KFNEIMAGM--EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASD 110 (171)
T ss_dssp HHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEEC
T ss_pred HHHHHHHHc--CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeec
Confidence 344444444 5888888877777888999999988 3 45666
No 305
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=21.65 E-value=1.6e+02 Score=21.33 Aligned_cols=35 Identities=6% Similarity=0.048 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK 37 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~ 37 (131)
..|+.++=+.|++.|+++.+..+.+......+.+.
T Consensus 132 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 132 FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 35778888888888999988877666555555553
No 306
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=21.35 E-value=2.5e+02 Score=20.70 Aligned_cols=47 Identities=15% Similarity=-0.084 Sum_probs=36.9
Q ss_pred hHHHHHHHHhhcCCcEEEE-eCCcchHHHHHHHHcCcceEEECCCCCc
Q psy15173 5 GLKEVHEDCKKLNIEFHFL-IGGAHEILPQFVEKHKLGAVVIDFMPLR 51 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~-~G~p~~~l~~l~~~~~a~~Vv~d~~ylr 51 (131)
|+.-+..-|+..|...+.+ ..-|.+.+.+.+++.+++.|.....-..
T Consensus 139 G~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~ 186 (258)
T 2i2x_B 139 GKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTT 186 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTT
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccC
Confidence 6777888899999987665 3467788888999999999988775443
No 307
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=21.20 E-value=1.2e+02 Score=22.18 Aligned_cols=40 Identities=20% Similarity=0.314 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
.++-+.+++.|+++.+---+..+.+..+. +.|++.|+||+
T Consensus 201 ~~~v~~~~~~G~~v~~wTvn~~~~~~~l~-~~GvdgIiTD~ 240 (252)
T 2pz0_A 201 PELVEGCKKNGVKLFPWTVDRKEDMERMI-KAGVDGIITDD 240 (252)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHHHHHH-HHTCSEEEESC
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHH-HcCCCEEEcCC
Confidence 34556677788877665333334444443 45888888886
No 308
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=21.17 E-value=2.5e+02 Score=22.43 Aligned_cols=46 Identities=15% Similarity=0.194 Sum_probs=34.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCC----------c--ch------HHHHHHHHcCcceEEECCCC
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGG----------A--HE------ILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~----------p--~~------~l~~l~~~~~a~~Vv~d~~y 49 (131)
+-+.++++.|++.|+.+....+- + .+ ...+++.+.+|..|+.|+.|
T Consensus 64 ~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~p 127 (386)
T 3bdk_A 64 ENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFMP 127 (386)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCCS
T ss_pred HHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcc
Confidence 56889999999999998775321 1 11 23467888999999988876
No 309
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=21.14 E-value=1.5e+02 Score=18.77 Aligned_cols=39 Identities=5% Similarity=0.028 Sum_probs=26.1
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCc--chHHHHHHHHcCcce
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGA--HEILPQFVEKHKLGA 42 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p--~~~l~~l~~~~~a~~ 42 (131)
..|.++.+.+.+.|+.++.+.-++ .+.+.+++++++...
T Consensus 48 ~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 88 (154)
T 3kcm_A 48 PSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTL 88 (154)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCe
Confidence 346667777777777777765443 566778887777653
No 310
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=21.13 E-value=1.7e+02 Score=18.73 Aligned_cols=62 Identities=6% Similarity=0.052 Sum_probs=38.1
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHc--CcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKH--KLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~--~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|++.|+..+....+..+.+.. +++. ..+.|+.|..- ........+.+.+..+ .+|
T Consensus 49 ~~~l~~~L~~~g~~v~~~~~~~~~al~~-l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~-~~~ 113 (157)
T 3hzh_A 49 VKQLTQIFTSEGFNIIDTAADGEEAVIK-YKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDK-NAR 113 (157)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCT-TCC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHH-HHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCC-CCc
Confidence 3556777888887764345566555544 4455 68999999763 3345556666665443 344
No 311
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=21.13 E-value=1.3e+02 Score=21.51 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=23.8
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHH
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVE 36 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~ 36 (131)
..|.++.++++++|+.++-+.-|+.....++++
T Consensus 52 ~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~ 84 (220)
T 1xcc_A 52 AELGKMHEDFLKLNCKLIGFSCNSKESHDKWIE 84 (220)
T ss_dssp HHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHH
Confidence 456777778888888877777777666666665
No 312
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=21.07 E-value=76 Score=21.76 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=23.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK 37 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~ 37 (131)
.|+.++-+.|++.|+++.+..+.+...+....+.
T Consensus 111 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~ 144 (247)
T 3dv9_A 111 PGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH 144 (247)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh
Confidence 5778888889999999999887665544444443
No 313
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=21.06 E-value=91 Score=22.84 Aligned_cols=33 Identities=15% Similarity=0.076 Sum_probs=27.4
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHH
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVE 36 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~ 36 (131)
..|.++.++++++|+.++.+.-|+.+.+.++++
T Consensus 50 ~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~ 82 (233)
T 2v2g_A 50 GRVIQLEGDFKKRGVKLIALSCDNVADHKEWSE 82 (233)
T ss_dssp HHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 467888888999999988888888777888887
No 314
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=21.03 E-value=1.4e+02 Score=24.01 Aligned_cols=64 Identities=6% Similarity=0.005 Sum_probs=40.8
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH-------cCcceEEECCCC-CchhhhHHHHHHhhCCCCchHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK-------HKLGAVVIDFMP-LREHMGWADTLKKDLPKDVPLI 71 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~-------~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p~~ 71 (131)
.||-+-+..+|.+.|||..+..... +..+.++ .||+.|..|-+- -+...--..-+|+... +||+
T Consensus 219 ~qG~rltA~eL~~~GIpvtlI~Dsa---~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~--vPfy 290 (374)
T 2yvk_A 219 LQGSRLTAWELMQGGIDVTLITDSM---AAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFD--IPFF 290 (374)
T ss_dssp THHHHTHHHHHHTTTCEEEEECGGG---HHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTT--CCEE
T ss_pred cccHHHHHHHHHHcCCCEEEEehhH---HHHHhhhcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcC--CCEE
Confidence 5787778999999999998876544 3445555 345555555432 2445555555666664 7764
No 315
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=20.91 E-value=1.7e+02 Score=20.80 Aligned_cols=44 Identities=7% Similarity=0.071 Sum_probs=27.6
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC---Cc---chHHHHHHHHcCcceEEEC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG---GA---HEILPQFVEKHKLGAVVID 46 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G---~p---~~~l~~l~~~~~a~~Vv~d 46 (131)
-+.+.++.+.+++.|+.+..... .. .....++|++.++..|++.
T Consensus 60 ~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 60 DEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 34567788888888887665421 11 1234556777888887774
No 316
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.89 E-value=1.5e+02 Score=18.06 Aligned_cols=62 Identities=21% Similarity=0.081 Sum_probs=37.7
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|.+.|...+....+..+.+ +.+++...+.|++|... ........+.+.+..+ ++|
T Consensus 14 ~~~l~~~L~~~g~~v~~~~~~~~~a~-~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~-~~~ 76 (134)
T 3f6c_A 14 IAAIRNLLIKNDIEILAELTEGGSAV-QRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQY-SGI 76 (134)
T ss_dssp HHHHHHHHHHTTEEEEEEESSSTTHH-HHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTC-CSE
T ss_pred HHHHHHHHhhCCcEEEEEcCCHHHHH-HHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCC-CCe
Confidence 34567778888854432345555544 45556689999999764 3345556666665443 445
No 317
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.84 E-value=1.7e+02 Score=18.55 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECCCC-CchhhhHHHHHHhhCCCCch
Q psy15173 6 LKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDFMP-LREHMGWADTLKKDLPKDVP 69 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~~y-lr~~r~w~~~v~~~l~~~~p 69 (131)
...+...|...|.... ...+..+. .+.+++...+.|++|... ....-...+.+.+..+ .+|
T Consensus 27 ~~~l~~~L~~~g~~v~-~~~~~~~a-~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~-~~~ 88 (153)
T 3hv2_A 27 LQRLQQLLSPLPYTLH-FARDATQA-LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYP-STT 88 (153)
T ss_dssp HHHHHHHHTTSSCEEE-EESSHHHH-HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCT-TSE
T ss_pred HHHHHHHhcccCcEEE-EECCHHHH-HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCC-CCe
Confidence 4557778888886544 33455554 455567789999999763 3334555566655443 344
No 318
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=20.78 E-value=1.5e+02 Score=21.41 Aligned_cols=39 Identities=21% Similarity=0.192 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEEECC
Q psy15173 7 KEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVVIDF 47 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv~d~ 47 (131)
.++-+.++++|+++.+---+..+.+..+.+ . ++.|+||+
T Consensus 188 ~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~-~-vdgIiTD~ 226 (234)
T 1o1z_A 188 VEVLRSFRKKGIVIFVWTLNDPEIYRKIRR-E-IDGVITDE 226 (234)
T ss_dssp HHHHHHHHHTTCEEEEESCCCHHHHHHHGG-G-CSEEEESC
T ss_pred HHHHHHHHHcCCEEEEeCCCCHHHHHHHHH-h-CCEEEcCC
Confidence 456667788888877754333444555554 4 88888886
No 319
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=20.77 E-value=2.2e+02 Score=21.39 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=32.2
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC-CcchHHHHHHHHcCcce----EEECC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG-GAHEILPQFVEKHKLGA----VVIDF 47 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G-~p~~~l~~l~~~~~a~~----Vv~d~ 47 (131)
.+++..+-+.|+++|.-| +=++ .+..+..+++++.++.. ||.|.
T Consensus 114 ~~~m~~vm~~l~~~gL~f-vDS~Ts~~S~a~~~A~~~gvp~~~rdvFLD~ 162 (245)
T 2nly_A 114 EKIMRAILEVVKEKNAFI-IDSGTSPHSLIPQLAEELEVPYATRSIFLDN 162 (245)
T ss_dssp HHHHHHHHHHHHHTTCEE-EECCCCSSCSHHHHHHHTTCCEEECCEESCC
T ss_pred HHHHHHHHHHHHHCCCEE-EcCCCCcccHHHHHHHHcCCCeEEeeEECCC
Confidence 467888899999999533 3233 45667889999999877 56666
No 320
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=20.75 E-value=1.2e+02 Score=20.20 Aligned_cols=37 Identities=14% Similarity=0.096 Sum_probs=23.7
Q ss_pred HHHHHHHhhcCCcEEEE-eCCcchHHHHHHHHcCcceE
Q psy15173 7 KEVHEDCKKLNIEFHFL-IGGAHEILPQFVEKHKLGAV 43 (131)
Q Consensus 7 ~el~~~L~~~gI~l~l~-~G~p~~~l~~l~~~~~a~~V 43 (131)
.++-++|.++|++-+++ .|-..+.+.+.++++++..|
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEE
Confidence 34456677777775444 35555677788888777644
No 321
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=20.66 E-value=1.4e+02 Score=19.87 Aligned_cols=33 Identities=6% Similarity=0.030 Sum_probs=23.9
Q ss_pred hhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHH
Q psy15173 4 LGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEK 37 (131)
Q Consensus 4 ~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~ 37 (131)
.|..++=+.|++ |+++.+..+.+...+..+.+.
T Consensus 92 ~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 92 AEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp HHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred hHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567777777877 888888877776666666654
No 322
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.65 E-value=2.4e+02 Score=20.26 Aligned_cols=47 Identities=11% Similarity=0.162 Sum_probs=34.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeC--------------------Ccc---------hHHHHHHHHcCcceEEECCCC
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIG--------------------GAH---------EILPQFVEKHKLGAVVIDFMP 49 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G--------------------~p~---------~~l~~l~~~~~a~~Vv~d~~y 49 (131)
-..+.++.+.|++.|+.+..... ++. ....+++++.++..|++.-++
T Consensus 50 ~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~ 125 (290)
T 3tva_A 50 REHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGF 125 (290)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 35688999999999999877631 111 234567899999999986543
No 323
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=20.45 E-value=1.5e+02 Score=21.86 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=37.4
Q ss_pred HHHHHHHHhhcCCcEEEE-----eCCc-chHHHHHHHHcCcceEEECCCCCchhhhHHH
Q psy15173 6 LKEVHEDCKKLNIEFHFL-----IGGA-HEILPQFVEKHKLGAVVIDFMPLREHMGWAD 58 (131)
Q Consensus 6 L~el~~~L~~~gI~l~l~-----~G~p-~~~l~~l~~~~~a~~Vv~d~~ylr~~r~w~~ 58 (131)
+..|...|...||..++- .|+. ...|.+-+++..+..||...+|..- .|..
T Consensus 52 v~~L~~aL~~~GI~~f~D~~el~~G~~I~~~l~~aIe~Sri~IvV~S~nYa~S--~WCl 108 (204)
T 3ozi_A 52 TDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADS--KWCL 108 (204)
T ss_dssp HHHHHHHHHHTTCCEEEEETTTCCGGGTTTTHHHHHHHCSEEEEEECTTGGGC--HHHH
T ss_pred HHHHHHHHHHCCCcEEEeCCccCCCCchHHHHHHHHHhCcEeeEEEEcccccC--cHHH
Confidence 356888999999997663 2543 3456677888999999999998754 5543
No 324
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=20.28 E-value=90 Score=20.68 Aligned_cols=40 Identities=10% Similarity=-0.047 Sum_probs=27.1
Q ss_pred hHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCc-c-eEEEC
Q psy15173 5 GLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKL-G-AVVID 46 (131)
Q Consensus 5 gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a-~-~Vv~d 46 (131)
.|.++.+++ .|+.++.+.-|..+.+.+++++++. . -++.|
T Consensus 64 ~l~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D 105 (163)
T 1psq_A 64 RFNEELAGL--DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSD 105 (163)
T ss_dssp HHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEEC
T ss_pred HHHHHHHHc--CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecC
Confidence 344444444 5788777777777778889988887 4 34555
No 325
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=20.17 E-value=1.4e+02 Score=23.79 Aligned_cols=64 Identities=11% Similarity=0.086 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHhhcCCcEEEEeCCcchHHHHHHHHcCcceEE-------ECCCCCchhhhHHHHHHhhCCCCchHH
Q psy15173 3 QLGLKEVHEDCKKLNIEFHFLIGGAHEILPQFVEKHKLGAVV-------IDFMPLREHMGWADTLKKDLPKDVPLI 71 (131)
Q Consensus 3 ~~gL~el~~~L~~~gI~l~l~~G~p~~~l~~l~~~~~a~~Vv-------~d~~ylr~~r~w~~~v~~~l~~~~p~~ 71 (131)
.+|-+-+..+|.+.|||..+..... +..+.++-+++.|+ .|--.-+...--..-+|+... +||+
T Consensus 192 ~qG~rlta~eL~~~GI~vtlI~Dsa---~~~~M~~~~Vd~VivGAd~V~aNGv~NKiGT~~lAl~Ak~~~--vPfy 262 (351)
T 1t5o_A 192 NQGSRLTCWELMEDGIDVTLITDSM---VGIVMQKGMVDKVIVGADRIVRDAVFNKIGTYTVSVVAKHHN--IPFY 262 (351)
T ss_dssp THHHHTHHHHHHHTTCCEEEECGGG---HHHHHHTTCCSEEEECCSEEETTEEEEETTHHHHHHHHHHTT--CCEE
T ss_pred cccHHHHHHHHHhCCCCEEEEehhH---HHHHhhcCCCCEEEECccchhhcCcccccCHHHHHHHHHHcC--CCEE
Confidence 5787778999999999998876544 34455543344444 443112344555555666664 7763
Done!