Query psy15182
Match_columns 366
No_of_seqs 143 out of 308
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 22:37:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r5m_A SIR4-interacting protei 95.8 1.2 4.1E-05 41.3 28.2 244 55-317 110-363 (425)
2 3vl1_A 26S proteasome regulato 92.8 6.1 0.00021 36.7 32.0 270 63-358 68-365 (420)
3 4ggc_A P55CDC, cell division c 92.6 5.1 0.00017 35.4 28.2 83 33-123 10-98 (318)
4 2ovr_B FBW7, F-BOX/WD repeat p 92.5 7.3 0.00025 37.0 34.4 270 54-360 160-442 (445)
5 2pm9_A Protein WEB1, protein t 92.0 7.4 0.00025 35.9 24.5 253 91-358 67-337 (416)
6 3odt_A Protein DOA1; ubiquitin 91.7 6.4 0.00022 34.5 38.1 279 44-357 9-295 (313)
7 3vgz_A Uncharacterized protein 90.4 9.6 0.00033 34.2 32.6 264 63-346 52-334 (353)
8 1gxr_A ESG1, transducin-like e 90.0 9.8 0.00033 33.6 26.6 209 90-324 50-264 (337)
9 3mmy_A MRNA export factor; mRN 89.2 12 0.00041 33.5 32.1 249 47-323 33-312 (368)
10 4a11_B DNA excision repair pro 88.8 14 0.00047 33.7 30.4 75 48-123 38-131 (408)
11 3sfz_A APAF-1, apoptotic pepti 88.1 29 0.001 37.6 19.9 237 54-323 962-1215(1249)
12 1sq9_A Antiviral protein SKI8; 86.7 19 0.00064 32.9 36.7 255 53-323 16-330 (397)
13 3v7d_B Cell division control p 86.2 23 0.00077 33.4 38.9 289 52-359 161-464 (464)
14 1r5m_A SIR4-interacting protei 84.4 24 0.00082 32.1 29.7 236 54-323 46-327 (425)
15 3lrv_A PRE-mRNA-splicing facto 84.3 24 0.00082 32.0 22.1 98 219-323 149-252 (343)
16 3mkq_A Coatomer beta'-subunit; 84.0 40 0.0014 34.3 33.7 248 49-323 9-267 (814)
17 1l0q_A Surface layer protein; 83.7 26 0.00089 32.0 32.5 238 54-323 32-283 (391)
18 1l0q_A Surface layer protein; 81.8 31 0.0011 31.5 33.6 255 66-354 5-271 (391)
19 3zwl_B Eukaryotic translation 80.9 30 0.001 30.7 38.0 274 53-357 32-345 (369)
20 4ery_A WD repeat-containing pr 80.8 30 0.001 30.6 37.3 275 53-356 23-310 (312)
21 4a11_B DNA excision repair pro 79.9 35 0.0012 30.9 28.0 70 53-123 99-175 (408)
22 3dwl_C Actin-related protein 2 79.8 35 0.0012 30.9 21.0 70 53-123 11-86 (377)
23 2vdu_B TRNA (guanine-N(7)-)-me 76.5 52 0.0018 31.1 36.9 244 93-359 104-392 (450)
24 1p22_A F-BOX/WD-repeat protein 76.0 52 0.0018 30.8 28.1 266 54-357 134-413 (435)
25 2ovr_B FBW7, F-BOX/WD repeat p 75.9 53 0.0018 30.8 34.1 230 56-323 122-356 (445)
26 3bws_A Protein LP49; two-domai 74.8 53 0.0018 30.3 32.0 259 63-356 133-430 (433)
27 1yfq_A Cell cycle arrest prote 74.0 47 0.0016 29.3 31.8 267 54-344 12-311 (342)
28 1k8k_C P40, ARP2/3 complex 41 71.7 55 0.0019 29.2 34.1 70 53-123 8-83 (372)
29 3amr_A 3-phytase; beta-propell 70.0 15 0.00053 35.4 8.7 57 64-122 40-107 (355)
30 4ggc_A P55CDC, cell division c 69.9 31 0.0011 30.1 10.3 70 54-125 241-317 (318)
31 1pgu_A Actin interacting prote 68.4 88 0.003 30.2 36.3 254 54-325 19-293 (615)
32 3v7d_B Cell division control p 67.9 80 0.0027 29.5 40.3 270 56-355 125-418 (464)
33 3bws_A Protein LP49; two-domai 66.9 79 0.0027 29.1 26.3 224 93-345 124-364 (433)
34 2xyi_A Probable histone-bindin 66.6 86 0.0029 29.4 28.1 33 91-123 128-160 (430)
35 4gga_A P55CDC, cell division c 65.6 87 0.003 29.1 30.4 262 61-356 112-393 (420)
36 1sq9_A Antiviral protein SKI8; 65.3 79 0.0027 28.5 29.1 72 52-123 61-157 (397)
37 3i2n_A WD repeat-containing pr 63.9 77 0.0026 27.9 28.6 82 41-123 5-99 (357)
38 3ei3_B DNA damage-binding prot 62.5 90 0.0031 28.2 14.8 71 54-125 164-238 (383)
39 4a2l_A BT_4663, two-component 62.3 1.5E+02 0.005 30.6 22.1 65 54-122 88-158 (795)
40 1xip_A Nucleoporin NUP159; bet 61.9 1.2E+02 0.004 29.3 14.1 178 53-266 39-233 (388)
41 3sfz_A APAF-1, apoptotic pepti 60.5 1.9E+02 0.0064 31.2 33.4 275 53-355 615-910 (1249)
42 4aow_A Guanine nucleotide-bind 57.6 98 0.0033 27.0 28.5 33 91-124 38-71 (340)
43 1k8k_C P40, ARP2/3 complex 41 57.4 1E+02 0.0035 27.3 16.7 111 53-179 142-274 (372)
44 3vu4_A KMHSV2; beta-propeller 55.4 1E+02 0.0035 28.0 11.4 70 53-123 195-271 (355)
45 4g56_B MGC81050 protein; prote 55.0 1.3E+02 0.0043 27.5 24.5 211 91-323 42-266 (357)
46 3f3f_A Nucleoporin SEH1; struc 54.9 1E+02 0.0035 26.5 31.2 81 43-123 1-90 (351)
47 1gxr_A ESG1, transducin-like e 54.5 1.1E+02 0.0037 26.6 35.8 270 53-356 51-335 (337)
48 4e54_B DNA damage-binding prot 52.9 16 0.00056 34.6 5.5 61 64-125 222-284 (435)
49 3vu4_A KMHSV2; beta-propeller 52.8 1.4E+02 0.0046 27.2 27.0 70 53-123 19-90 (355)
50 3v9f_A Two-component system se 48.7 2.4E+02 0.0082 28.9 21.2 65 54-121 66-144 (781)
51 3jro_A Fusion protein of prote 47.4 2.5E+02 0.0085 28.7 21.1 70 53-123 53-132 (753)
52 3i2n_A WD repeat-containing pr 46.3 1.5E+02 0.0051 25.9 27.7 246 92-358 19-291 (357)
53 3dsm_A Uncharacterized protein 44.6 1.8E+02 0.006 26.2 28.2 233 56-323 46-309 (328)
54 1pgu_A Actin interacting prote 44.2 2.2E+02 0.0075 27.2 26.8 67 55-123 208-283 (615)
55 3odt_A Protein DOA1; ubiquitin 43.2 1.6E+02 0.0053 25.2 28.1 201 92-323 19-222 (313)
56 2aq5_A Coronin-1A; WD40 repeat 42.8 2E+02 0.0067 26.2 22.9 69 53-123 131-207 (402)
57 3f3f_A Nucleoporin SEH1; struc 41.0 1.7E+02 0.0059 25.0 29.0 72 52-124 56-144 (351)
58 1jmx_B Amine dehydrogenase; ox 39.6 1.9E+02 0.0065 25.2 26.9 52 71-123 20-74 (349)
59 3ott_A Two-component system se 38.1 3.4E+02 0.012 27.6 23.9 64 54-121 103-172 (758)
60 1p22_A F-BOX/WD-repeat protein 36.8 2.6E+02 0.0088 25.9 27.3 235 53-323 173-422 (435)
61 1bpo_A Protein (clathrin); cla 36.4 3.4E+02 0.012 27.2 22.6 145 64-231 117-292 (494)
62 4aez_A CDC20, WD repeat-contai 36.2 2.5E+02 0.0086 25.6 35.2 264 61-358 100-380 (401)
63 3lrv_A PRE-mRNA-splicing facto 34.9 2.4E+02 0.0083 25.0 19.4 69 54-124 171-245 (343)
64 3u4y_A Uncharacterized protein 34.5 2.3E+02 0.0079 24.6 17.6 138 210-357 11-159 (331)
65 1jmx_B Amine dehydrogenase; ox 33.6 1.2E+02 0.004 26.7 7.7 57 65-124 269-326 (349)
66 2pm9_A Protein WEB1, protein t 33.0 2.7E+02 0.0092 25.0 24.0 73 53-125 67-147 (416)
67 2lix_A IMKTX104, potassium cha 37.4 10 0.00035 22.0 0.0 17 257-273 6-22 (27)
68 3dw8_B Serine/threonine-protei 31.1 2.6E+02 0.0089 25.4 10.0 68 53-122 226-314 (447)
69 4e54_B DNA damage-binding prot 30.4 3.3E+02 0.011 25.2 23.7 72 51-122 117-195 (435)
70 3dwl_C Actin-related protein 2 30.1 2.2E+02 0.0074 25.4 9.0 71 52-123 99-177 (377)
71 2aq5_A Coronin-1A; WD40 repeat 29.5 3.2E+02 0.011 24.7 25.8 205 91-317 81-301 (402)
72 3jrp_A Fusion protein of prote 29.0 2.9E+02 0.01 24.1 25.9 71 53-124 55-135 (379)
73 2xzh_A Clathrin heavy chain 1; 29.0 3.9E+02 0.014 25.6 23.5 148 64-232 118-294 (365)
74 3u4y_A Uncharacterized protein 27.0 3.1E+02 0.011 23.7 27.4 224 103-358 9-250 (331)
75 3ei3_B DNA damage-binding prot 25.7 3.6E+02 0.012 24.0 33.8 73 50-123 70-150 (383)
76 3hxj_A Pyrrolo-quinoline quino 25.6 92 0.0031 27.3 5.5 18 63-80 225-243 (330)
77 2pm7_B Protein transport prote 25.1 3.4E+02 0.012 23.5 9.7 69 54-122 10-85 (297)
78 3ei3_A DNA damage-binding prot 21.6 8.3E+02 0.029 26.9 28.3 214 54-298 514-747 (1158)
79 4a2l_A BT_4663, two-component 21.5 6.5E+02 0.022 25.6 28.3 239 54-318 357-617 (795)
80 4g56_B MGC81050 protein; prote 21.2 4.5E+02 0.015 23.6 28.4 239 91-357 94-342 (357)
81 3zwl_B Eukaryotic translation 21.1 4E+02 0.014 23.0 31.9 71 53-124 74-152 (369)
82 3dsm_A Uncharacterized protein 20.9 4.4E+02 0.015 23.4 22.4 156 187-358 76-251 (328)
83 2ynn_A Coatomer subunit beta'; 20.7 4.2E+02 0.014 23.0 34.4 79 44-123 4-86 (304)
84 2mad_H Methylamine dehydrogena 20.5 2.8E+02 0.0095 25.8 8.0 52 73-125 299-352 (373)
85 2ece_A 462AA long hypothetical 20.1 5.6E+02 0.019 25.3 10.3 121 218-345 105-272 (462)
No 1
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.80 E-value=1.2 Score=41.26 Aligned_cols=244 Identities=9% Similarity=0.052 Sum_probs=111.5
Q ss_pred eeEEeEEe--cceEEEeeccee-EEEEecCCCceEEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhcccc
Q psy15182 55 EILCAALW--GVNLLIGTETGL-MLLDRSGQGKVYQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKIL 129 (366)
Q Consensus 55 ~I~Caa~w--g~~LllGTeeGl-yll~~~~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~ 129 (366)
.|.|.+.- |+.|+.|+.+|. .+.+.+ ++....+. ...|..+...++.+.|++. +.++.|++|++..-.....
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKT--GALLNVLNFHRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQH 186 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCeeeeccCCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEE
Confidence 67777533 345999999984 444533 23333332 3479999999888877655 5789999999864321000
Q ss_pred ccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCC
Q psy15182 130 KMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGT 209 (366)
Q Consensus 130 ~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~ 209 (366)
-..+...............+....++.......+++......|.+|..... + ..+.+..-......+.+. ..+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~---~--~~~~~~~~~~~i~~~~~~-~~~~ 260 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK---T--PTGKLIGHHGPISVLEFN-DTNK 260 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS---S--CSEEECCCSSCEEEEEEE-TTTT
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC---c--eeeeeccCCCceEEEEEC-CCCC
Confidence 000000000000000000000011111122334555544455666554432 1 222321111222223221 1233
Q ss_pred eEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcc-eEEEEeC-CCceeeeeeeeeCC
Q psy15182 210 RLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDN-EGVYVNT-YGKVSKNILLQWGE 287 (366)
Q Consensus 210 ~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~-~~vfVn~-~G~~sr~~~l~W~~ 287 (366)
.+.++- ......++|++++.....+.. + .....++.--++ ..++.+-.+ .-...|. .|+...... .-..
T Consensus 261 ~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~---~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~ 331 (425)
T 1r5m_A 261 LLLSAS-DDGTLRIWHGGNGNSQNCFYG-H---SQSIVSASWVGD---DKVISCSMDGSVRLWSLKQNTLLALSI-VDGV 331 (425)
T ss_dssp EEEEEE-TTSCEEEECSSSBSCSEEECC-C---SSCEEEEEEETT---TEEEEEETTSEEEEEETTTTEEEEEEE-CTTC
T ss_pred EEEEEc-CCCEEEEEECCCCccceEecC-C---CccEEEEEECCC---CEEEEEeCCCcEEEEECCCCcEeEecc-cCCc
Confidence 444432 234577889887765544422 1 111223322222 244444433 3333454 333332222 1134
Q ss_pred CCcEEEEccC--CeEE-EEeCCeEEEEEccCCC
Q psy15182 288 MPTSVAYIGT--GQIM-GWGNKAIEIRSVETGH 317 (366)
Q Consensus 288 ~P~sva~~~~--PYil-~f~~~~IEIR~v~tg~ 317 (366)
.+.++++ .. .+++ |-....|.|..+.++.
T Consensus 332 ~i~~~~~-s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 332 PIFAGRI-SQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp CEEEEEE-CTTSSEEEEEETTSCEEEEECHHHH
T ss_pred cEEEEEE-cCCCCEEEEEECCCeEEEEECCCCc
Confidence 4566676 42 2443 3445789999999998
No 2
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.82 E-value=6.1 Score=36.74 Aligned_cols=270 Identities=8% Similarity=0.030 Sum_probs=130.1
Q ss_pred cceEEEeecceeEEEEecCCCceEEeecCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeee
Q psy15182 63 GVNLLIGTETGLMLLDRSGQGKVYQLVNRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWI 142 (366)
Q Consensus 63 g~~LllGTeeGlyll~~~~~~~~~~l~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~ 142 (366)
|+.|+.|+.+|...+..-...+..+.+....+..+......+-+++..+.++.|++|++..-.. .+.
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~---- 134 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ---------REI---- 134 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE---------EEE----
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcce---------eee----
Confidence 4559999888866554322211112233335666666654554555566899999999753110 000
Q ss_pred EeecCCCceEEEEEEEcCeEEEEEEECC-cEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCce
Q psy15182 143 NVGDLQGAVHFRIVKYERIKFLVIALKD-SIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGF 221 (366)
Q Consensus 143 ~v~~~kgc~~f~v~~~~~~~~LcvA~k~-~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF 221 (366)
+ ........++.-.....+|+.+-.. .|.+|.... .. ..+.+..-......+.+. ..+..+..|-. ...-
T Consensus 135 -~-~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~--~~---~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~-d~~v 205 (420)
T 3vl1_A 135 -D-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD--GS---NPRTLIGHRATVTDIAII-DRGRNVLSASL-DGTI 205 (420)
T ss_dssp -T-TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CC---CCEEEECCSSCEEEEEEE-TTTTEEEEEET-TSCE
T ss_pred -c-ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC--Cc---CceEEcCCCCcEEEEEEc-CCCCEEEEEcC-CCcE
Confidence 0 0001112223233233455555554 465554432 11 223332111222233321 12334444322 2347
Q ss_pred EEEECCCCceEEeecCC-CCCCCCcceEEEEec-------------------CCCCceEEEEEcc-eEEEEeC-CCceee
Q psy15182 222 HAVDLDSAMVYDIYLPK-HIQGPICPHCIVALP-------------------NSNGMQLLLCYDN-EGVYVNT-YGKVSK 279 (366)
Q Consensus 222 ~~idl~~~~~~~L~~p~-~~~~~~~p~~I~~l~-------------------~~~~~E~LLcy~~-~~vfVn~-~G~~sr 279 (366)
.+.|+.++.....+... .....+ .++...+ ..++..++.+..+ ...+-|. .|+...
T Consensus 206 ~iwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 206 RLWECGTGTTIHTFNRKENPHDGV--NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI 283 (420)
T ss_dssp EEEETTTTEEEEEECBTTBTTCCE--EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEeECCCCceeEEeecCCCCCCCc--cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE
Confidence 79999988766555321 111111 1111111 0112233333332 2333344 334333
Q ss_pred eeeeeeCCCCcEEEEccCC---eEEEEe-CCeEEEEEccCCC-EEEEEeccCCCceeEEEEeCCEEEEEeCCCCCeeEEE
Q psy15182 280 NILLQWGEMPTSVAYIGTG---QIMGWG-NKAIEIRSVETGH-LDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHCQIY 354 (366)
Q Consensus 280 ~~~l~W~~~P~sva~~~~P---Yil~f~-~~~IEIR~v~tg~-Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~ 354 (366)
...-.......++++ ... +++.-. ...|.+.++.++. .++.+.......+..+....+.+++ +...++.-.+|
T Consensus 284 ~~~~~~~~~v~~~~~-~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-s~~~d~~v~iw 361 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTV-DGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFV-SSGFDTSIKLD 361 (420)
T ss_dssp EECCTTSSCEEEEEE-CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEE-EETTTEEEEEE
T ss_pred EcccccCCCceeEEE-eCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEE-EecCCccEEEE
Confidence 333334455677787 554 544444 4789999999985 3677653234566666666666544 44556677888
Q ss_pred EEec
Q psy15182 355 FMTL 358 (366)
Q Consensus 355 ~~~~ 358 (366)
-+.-
T Consensus 362 ~~~~ 365 (420)
T 3vl1_A 362 IISD 365 (420)
T ss_dssp EECC
T ss_pred eccC
Confidence 7664
No 3
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.63 E-value=5.1 Score=35.38 Aligned_cols=83 Identities=22% Similarity=0.340 Sum_probs=53.5
Q ss_pred CCccCCCCCCceeeEeeecCCceeEEeEEecc-e-EEEeecceeEEEEecCCCceEEeec----CCceEEEEEecCCCeE
Q psy15182 33 PTCQDLSSDTPEIRKYKKKFGSEILCAALWGV-N-LLIGTETGLMLLDRSGQGKVYQLVN----RRRFQQMEVLEGQNIL 106 (366)
Q Consensus 33 ~~~~~~~~~~p~~~~~~k~f~~~I~Caa~wg~-~-LllGTeeGlyll~~~~~~~~~~l~~----~k~v~Ql~Vle~~~lL 106 (366)
|+...-.-++|+.+. +|.. +|. .|.. + |.+|.+.-+++.|.. .++..+++. ...|+.+...++-+.|
T Consensus 10 p~~p~rvldap~~~~---d~y~--~~l-~WS~~~~lAvg~D~tV~iWd~~-tg~~~~~~~~~~~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 10 PSLPDRILDAPEIRN---DYYL--NLV-DWSSGNVLAVALDNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYL 82 (318)
T ss_dssp CSSCSEEEECTTCCC---CTTC--BCE-EECTTSEEEEEETTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEE
T ss_pred CCCCCEEeeCCCCcc---cccc--eEE-EECCCCEEEEEeCCEEEEEECC-CCCEEEEEEecCCCCeEEEEEECCCCCEE
Confidence 444433345665432 3322 333 4853 3 899999889999864 233444442 2369999999988877
Q ss_pred EEEECCCCeEEEEEchh
Q psy15182 107 VTISGKRNRVRVFYLSW 123 (366)
Q Consensus 107 i~lsGk~~~L~v~~L~~ 123 (366)
++- +.|+.|++|++..
T Consensus 83 ~sg-s~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 83 AVG-TSSAEVQLWDVQQ 98 (318)
T ss_dssp EEE-ETTSEEEEEETTT
T ss_pred EEE-ECCCcEEEeecCC
Confidence 654 5899999999854
No 4
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.55 E-value=7.3 Score=36.96 Aligned_cols=270 Identities=8% Similarity=0.091 Sum_probs=130.0
Q ss_pred ceeEEeEEecceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhcccccc
Q psy15182 54 SEILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKM 131 (366)
Q Consensus 54 ~~I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~ 131 (366)
..|.|.+.-++.|+.|..+|...+..-..++....+ ....|..+..- .+. ++..+.|+.|++|++..-..
T Consensus 160 ~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~-l~s~s~dg~i~~wd~~~~~~----- 231 (445)
T 2ovr_B 160 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKR-VVSGSRDATLRVWDIETGQC----- 231 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTE-EEEEETTSEEEEEESSSCCE-----
T ss_pred CCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCE-EEEEeCCCEEEEEECCCCcE-----
Confidence 456665544455777777765444322122222222 22357666663 233 33445778888888753210
Q ss_pred CCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeE
Q psy15182 132 DGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRL 211 (366)
Q Consensus 132 ~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l 211 (366)
+.. +.. ......++.. ++..+++......|.++..... ..++++. . +......+. +.+..+
T Consensus 232 ---~~~------~~~-~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~-~-~~~~v~~~~-~~~~~l 292 (445)
T 2ovr_B 232 ---LHV------LMG-HVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETE-----TCLHTLQ-G-HTNRVYSLQ-FDGIHV 292 (445)
T ss_dssp ---EEE------EEC-CSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGT-----EEEEEEC-C-CSSCEEEEE-ECSSEE
T ss_pred ---EEE------EcC-CcccEEEEEE-CCCEEEEEcCCCEEEEEECCCC-----cEeEEec-C-CCCceEEEE-ECCCEE
Confidence 000 000 0011112211 3433333333445666543321 2333442 1 112112222 245555
Q ss_pred EEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-cceEEEEeC-CCceeeeeee--eeCC
Q psy15182 212 KVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-DNEGVYVNT-YGKVSKNILL--QWGE 287 (366)
Q Consensus 212 ~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~~~~vfVn~-~G~~sr~~~l--~W~~ 287 (366)
..|- ......+.|++++.....+.. + .....++ ... +.-++.+. |..-.+-|. .|+..+.... .-..
T Consensus 293 ~~~~-~d~~i~i~d~~~~~~~~~~~~-~---~~~v~~~-~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 293 VSGS-LDTSIRVWDVETGNCIHTLTG-H---QSLTSGM-ELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp EEEE-TTSCEEEEETTTCCEEEEECC-C---CSCEEEE-EEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred EEEe-CCCeEEEEECCCCCEEEEEcC-C---cccEEEE-EEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 5543 245678999998876554422 1 1111122 222 23444444 333333453 4554443322 1344
Q ss_pred CCcEEEEccCCeEEEEe-CCeEEEEEccCCCEEEEEec----cCCCceeEEEEeCCEEEEEeCCCCC--eeEEEEEecCC
Q psy15182 288 MPTSVAYIGTGQIMGWG-NKAIEIRSVETGHLDGVFMH----KKSQRLKFLCERNDKVFFSSAKGGG--HCQIYFMTLNK 360 (366)
Q Consensus 288 ~P~sva~~~~PYil~f~-~~~IEIR~v~tg~Lvq~i~~----k~~~~lr~L~~~~d~vf~as~~~~~--~~~v~~~~~~~ 360 (366)
...++++ +..+++.-+ ...|.|.++.+|++++.+.. .....+.-+.-..+..++++...+| ...|++..+..
T Consensus 364 ~v~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 364 AVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CEEEEEE-CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEE-CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 5667888 777766655 46799999999999999831 1122333344445555555544444 46777777754
No 5
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.05 E-value=7.4 Score=35.92 Aligned_cols=253 Identities=8% Similarity=-0.022 Sum_probs=111.7
Q ss_pred CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEE-cCeEEEEEEE-
Q psy15182 91 RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKY-ERIKFLVIAL- 168 (366)
Q Consensus 91 ~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~-~~~~~LcvA~- 168 (366)
..+|..+..-++-++|++- +.|+.|++|++....... ..+..-. +...... ++... ++..+|+.+-
T Consensus 67 ~~~v~~~~~s~~~~~l~~~-~~dg~v~vw~~~~~~~~~----~~~~~~~-----~h~~~v~--~~~~~~~~~~~l~s~~~ 134 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGA-LDNGSLELYSTNEANNAI----NSMARFS-----NHSSSVK--TVKFNAKQDNVLASGGN 134 (416)
T ss_dssp SSCEEEEEECSSSSCEEEE-ESSSCEEEECCSSTTSCC----CEEEECC-----CSSSCCC--EEEECSSSTTBEEEECS
T ss_pred CCceEEEEECCCCCeEEEE-ccCCeEEEeecccccccc----cchhhcc-----CCccceE--EEEEcCCCCCEEEEEcC
Confidence 4579999998887766554 478899999986532110 0000000 0011111 12122 1123344443
Q ss_pred CCcEEEEEecCCCc--c--ccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCC-CC-
Q psy15182 169 KDSIEIYAWAPKPY--H--KFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHI-QG- 242 (366)
Q Consensus 169 k~~i~iy~w~~~p~--~--kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~-~~- 242 (366)
...|.+|....... . .-..+..+.........+.+.- .+..+.+.-+......++|++++.....+..... .+
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQ-SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGI 213 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECS-SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCC
T ss_pred CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCC-CCCcEEEEEcCCCCEEEEECCCCCcceEEecccccccc
Confidence 34555544332110 0 1001111111112223333221 2133333223234578999998766544422110 00
Q ss_pred CCcceEEEEecCCCCceEEEEEcc----eEEEEeCCC--ceeeeeeeeeCCCCcEEEEccC---CeEEEE-eCCeEEEEE
Q psy15182 243 PICPHCIVALPNSNGMQLLLCYDN----EGVYVNTYG--KVSKNILLQWGEMPTSVAYIGT---GQIMGW-GNKAIEIRS 312 (366)
Q Consensus 243 ~~~p~~I~~l~~~~~~E~LLcy~~----~~vfVn~~G--~~sr~~~l~W~~~P~sva~~~~---PYil~f-~~~~IEIR~ 312 (366)
.....++. ...+++.-++.+.++ .-..-|... ...+.....-.....++++ +. .+++.- ....|.+.+
T Consensus 214 ~~~v~~~~-~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 214 KQQLSVVE-WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDW-CHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp CCCEEEEE-ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEE-CSSCSSCEEEEESSSEEEEEC
T ss_pred CCceEEEE-ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEe-CCCCCCeEEEEeCCCCEEEee
Confidence 11122332 322222345555543 333335433 2222221123445667777 33 244433 357899999
Q ss_pred ccCCCEEEEEeccCCCceeEEEEeCCEEEEEeCCCCCeeEEEEEec
Q psy15182 313 VETGHLDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHCQIYFMTL 358 (366)
Q Consensus 313 v~tg~Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~~~~~ 358 (366)
+.+++.++++.....+-..+-.+..+.-++++...++.-.||=+.-
T Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 292 PESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 9999999998632222222222222212233334555667776543
No 6
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.72 E-value=6.4 Score=34.53 Aligned_cols=279 Identities=9% Similarity=0.040 Sum_probs=134.8
Q ss_pred eeeEeeecCCceeEEeEEe-cceEEEeeccee-EEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEE
Q psy15182 44 EIRKYKKKFGSEILCAALW-GVNLLIGTETGL-MLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVF 119 (366)
Q Consensus 44 ~~~~~~k~f~~~I~Caa~w-g~~LllGTeeGl-yll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~ 119 (366)
+.....+--...|.|.+.- |..|+.|+++|. .+.+... .+....+ ....|..+...++.+.|++- +.++.+++|
T Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~ 86 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDD-QWLGTVVYTGQGFLNSVCYDSEKELLLFG-GKDTMINGV 86 (313)
T ss_dssp EEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESS-SEEEEEEEECSSCEEEEEEETTTTEEEEE-ETTSCEEEE
T ss_pred HHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCC-CEEEEEeecCCccEEEEEECCCCCEEEEe-cCCCeEEEE
Confidence 3333334445788888653 334999999994 4555432 2222222 24579999999877766654 578999999
Q ss_pred EchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCce
Q psy15182 120 YLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPL 199 (366)
Q Consensus 120 ~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~ 199 (366)
++....... ....+... .... .++.. ++..+++......|.+|. .. + ....+..-..+..
T Consensus 87 ~~~~~~~~~--~~~~~~~~--------~~~i--~~~~~-~~~~l~~~~~d~~i~~~d--~~---~--~~~~~~~~~~~v~ 146 (313)
T 3odt_A 87 PLFATSGED--PLYTLIGH--------QGNV--CSLSF-QDGVVISGSWDKTAKVWK--EG---S--LVYNLQAHNASVW 146 (313)
T ss_dssp ETTCCTTSC--C-CEECCC--------SSCE--EEEEE-ETTEEEEEETTSEEEEEE--TT---E--EEEEEECCSSCEE
T ss_pred EeeecCCCC--cccchhhc--------ccCE--EEEEe-cCCEEEEEeCCCCEEEEc--CC---c--EEEecccCCCcee
Confidence 986643210 00011000 1111 12222 333444434344555543 21 1 2223221112222
Q ss_pred EEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcceEE-EEeCC-Cce
Q psy15182 200 LVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNEGV-YVNTY-GKV 277 (366)
Q Consensus 200 ~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~~v-fVn~~-G~~ 277 (366)
.+.+....+..+.++ +......++|. +.....+...+ .....++...++ ..++.+..+-.+ ..|.. |+.
T Consensus 147 ~~~~~~~~~~~l~~~-~~d~~i~i~d~--~~~~~~~~~~~---~~~i~~~~~~~~---~~~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 147 DAKVVSFSENKFLTA-SADKTIKLWQN--DKVIKTFSGIH---NDVVRHLAVVDD---GHFISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEEETTTTEEEEE-ETTSCEEEEET--TEEEEEECSSC---SSCEEEEEEEET---TEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEccCCCCEEEEE-ECCCCEEEEec--CceEEEEeccC---cccEEEEEEcCC---CeEEEccCCCeEEEEECCchhh
Confidence 232222234455443 32445677773 23333332211 112223332332 246665544333 33543 444
Q ss_pred eeeeeeeeCCCCcEEEEccCC-e-EEEEeCCeEEEEEccCCCEEEEEeccCCCceeEEEEeCCEEEEEeCCCCCeeEEEE
Q psy15182 278 SKNILLQWGEMPTSVAYIGTG-Q-IMGWGNKAIEIRSVETGHLDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHCQIYF 355 (366)
Q Consensus 278 sr~~~l~W~~~P~sva~~~~P-Y-il~f~~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~~ 355 (366)
.+.+.- -.+...++++ ... + +.+-....|.+.++.++++++++.....+-..+-.+..+.++.++ .++.-.+|-
T Consensus 218 ~~~~~~-~~~~i~~~~~-~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~dg~i~iw~ 293 (313)
T 3odt_A 218 LRTYEG-HESFVYCIKL-LPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGS--SDNLVRIFS 293 (313)
T ss_dssp EEEEEC-CSSCEEEEEE-CTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEE--TTSCEEEEE
T ss_pred hhhhhc-CCceEEEEEE-ecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEe--CCCcEEEEe
Confidence 433321 2344566777 443 4 444445789999999999999986333222223333344444433 455566665
Q ss_pred Ee
Q psy15182 356 MT 357 (366)
Q Consensus 356 ~~ 357 (366)
+.
T Consensus 294 ~~ 295 (313)
T 3odt_A 294 QE 295 (313)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 7
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.42 E-value=9.6 Score=34.21 Aligned_cols=264 Identities=11% Similarity=0.018 Sum_probs=128.2
Q ss_pred cceEEEeec--------ceeEEEEecCCCceEEeec-CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCC
Q psy15182 63 GVNLLIGTE--------TGLMLLDRSGQGKVYQLVN-RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDG 133 (366)
Q Consensus 63 g~~LllGTe--------eGlyll~~~~~~~~~~l~~-~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~ 133 (366)
|+.|+++.. ..++++|... +++.+.+. ......+.+-++-+.+++..+.++.|+++++..-+.. .
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~--~--- 125 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVT-LEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK--G--- 125 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTT-CCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE--E---
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCC-CeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE--E---
Confidence 345777773 3578887642 23333332 2357778888888877777777889999998543210 0
Q ss_pred cceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEE-CCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEE
Q psy15182 134 QVERRNGWINVGDLQGAVHFRIVKYERIKFLVIAL-KDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLK 212 (366)
Q Consensus 134 ~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~-k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~ 212 (366)
.++-..+.. -......+...+.......++.++- ...-.++.|..+.. ...+.+......|..+.+. ..+..+.
T Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s-~dg~~l~ 200 (353)
T 3vgz_A 126 RLVLDDRKR-TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI---KLKTAIQNTGKMSTGLALD-SEGKRLY 200 (353)
T ss_dssp EEESCCCCC-CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT---EEEEEECCCCTTCCCCEEE-TTTTEEE
T ss_pred EEecCCCcc-ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC---ceEEEecCCCCccceEEEC-CCCCEEE
Confidence 000000000 0000000112222222223344443 33444556654321 2333432122234333322 2345565
Q ss_pred EEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-c-ceEEEEeC-CCceeeeeeeeeCCCC
Q psy15182 213 VIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-D-NEGVYVNT-YGKVSKNILLQWGEMP 289 (366)
Q Consensus 213 V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~-~~~vfVn~-~G~~sr~~~l~W~~~P 289 (366)
++-. .....++|+.++.....+...+......+..+. +..+ +..+.+.- + +.-..+|. .|+..+.... ..|
T Consensus 201 ~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~s~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~ 274 (353)
T 3vgz_A 201 TTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINIS-LDTA-RQRAFITDSKAAEVLVVDTRNGNILAKVAA---PES 274 (353)
T ss_dssp EECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE-EETT-TTEEEEEESSSSEEEEEETTTCCEEEEEEC---SSC
T ss_pred EEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEE-ECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEc---CCC
Confidence 5432 356778999988766544221110111222232 3222 23333332 2 33344565 4555555443 346
Q ss_pred cEEEEccCC--eEEEEe--CCeEEEEEccCCCEEEEEeccCCCceeEEEE--eCCEEEEEeCC
Q psy15182 290 TSVAYIGTG--QIMGWG--NKAIEIRSVETGHLDGVFMHKKSQRLKFLCE--RNDKVFFSSAK 346 (366)
Q Consensus 290 ~sva~~~~P--Yil~f~--~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~--~~d~vf~as~~ 346 (366)
.++++ ... ++++-. .+.|.+.++.+|++++.+... ....-++- .+..+|+++..
T Consensus 275 ~~~~~-s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 LAVLF-NPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP--THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCEEE-ETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC--SEEEEEEECTTSCEEEEEEEC
T ss_pred ceEEE-CCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC--CCCCeEEEcCCCCEEEEEEcc
Confidence 67777 433 444443 588999999999999988732 23333322 34457777754
No 8
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=89.98 E-value=9.8 Score=33.64 Aligned_cols=209 Identities=11% Similarity=0.064 Sum_probs=101.3
Q ss_pred cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC
Q psy15182 90 NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK 169 (366)
Q Consensus 90 ~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k 169 (366)
....|+.+..-++.++|++-+ ++.+++|++..-... ..+..-. ... ......++.-.....+|+++-.
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~-----~~~~~~~----~~~-~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNK-----SPVSQLD----CLN-RDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCC-----SCSEEEE----CSC-TTSBEEEEEECTTSSEEEEEES
T ss_pred CCCceEEEEEecCCcEEEEcC--CCeEEEEECCCCCce-----eeeeccc----ccC-CCCcEEEEEEcCCCCEEEEEcC
Confidence 344799999998888777654 899999998642210 0000000 000 0111222222233344555544
Q ss_pred -CcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceE
Q psy15182 170 -DSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHC 248 (366)
Q Consensus 170 -~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~ 248 (366)
..|.+|...... ......+..-......+.+. ..+..+.++ +......++|++++.....+.. + .....+
T Consensus 118 d~~i~~~d~~~~~---~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~-~~dg~v~~~d~~~~~~~~~~~~-~---~~~i~~ 188 (337)
T 1gxr_A 118 ASTLSIWDLAAPT---PRIKAELTSSAPACYALAIS-PDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQG-H---TDGASC 188 (337)
T ss_dssp SSEEEEEECCCC-----EEEEEEECSSSCEEEEEEC-TTSSEEEEE-ETTSCEEEEETTTTEEEEEECC-C---SSCEEE
T ss_pred CCcEEEEECCCCC---cceeeecccCCCceEEEEEC-CCCCEEEEE-eCCCcEEEEeCCCCceeeeeec-c---cCceEE
Confidence 456666554321 11122221111112222211 123334443 2235678999998876655522 2 111223
Q ss_pred EEEecCCCCceEEEEEcc-eEEEEeCC-CceeeeeeeeeCCCCcEEEEccCC--e-EEEEeCCeEEEEEccCCCEEEEEe
Q psy15182 249 IVALPNSNGMQLLLCYDN-EGVYVNTY-GKVSKNILLQWGEMPTSVAYIGTG--Q-IMGWGNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 249 I~~l~~~~~~E~LLcy~~-~~vfVn~~-G~~sr~~~l~W~~~P~sva~~~~P--Y-il~f~~~~IEIR~v~tg~Lvq~i~ 323 (366)
+.--+ ++..++.+..+ .-..-|.. |+.... +..+..+.++++ +.. + +.+-....|.+.++.+++..+...
T Consensus 189 ~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~~v~~~~~-s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~ 263 (337)
T 1gxr_A 189 IDISN--DGTKLWTGGLDNTVRSWDLREGRQLQQ--HDFTSQIFSLGY-CPTGEWLAVGMESSNVEVLHVNKPDKYQLHL 263 (337)
T ss_dssp EEECT--TSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTSSCEEEECC
T ss_pred EEECC--CCCEEEEEecCCcEEEEECCCCceEee--ecCCCceEEEEE-CCCCCEEEEEcCCCcEEEEECCCCCeEEEcC
Confidence 32222 23455555543 33334544 433333 344556777777 332 3 334446889999999998765544
Q ss_pred c
Q psy15182 324 H 324 (366)
Q Consensus 324 ~ 324 (366)
|
T Consensus 264 ~ 264 (337)
T 1gxr_A 264 H 264 (337)
T ss_dssp C
T ss_pred C
Confidence 4
No 9
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.17 E-value=12 Score=33.47 Aligned_cols=249 Identities=8% Similarity=0.021 Sum_probs=120.3
Q ss_pred EeeecCCceeEEeEEec-----ceEEEeecceeE-EEEecC-CCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEE
Q psy15182 47 KYKKKFGSEILCAALWG-----VNLLIGTETGLM-LLDRSG-QGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVR 117 (366)
Q Consensus 47 ~~~k~f~~~I~Caa~wg-----~~LllGTeeGly-ll~~~~-~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~ 117 (366)
...+.-...|.|.+.-. +.|+.|+++|.. +.+... ...+.+.+ ....|+.+...++.+.|++- +.|+.|+
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~ 111 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA-SCDKTAK 111 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE-cCCCcEE
Confidence 44444467889887542 349999988854 444442 22222322 34589999999988877755 4789999
Q ss_pred EEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCCccccceeeeecccCC
Q psy15182 118 VFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKPYHKFMAFKSFGELGY 196 (366)
Q Consensus 118 v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p~~kF~~~Kef~~lp~ 196 (366)
+|++..-.. .+..+ ........+........+|+++-. ..|.+ |..+... .+..+ ..+.
T Consensus 112 iwd~~~~~~---------~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~dg~i~v--wd~~~~~---~~~~~-~~~~ 171 (368)
T 3mmy_A 112 MWDLSSNQA---------IQIAQ-----HDAPVKTIHWIKAPNYSCVMTGSWDKTLKF--WDTRSSN---PMMVL-QLPE 171 (368)
T ss_dssp EEETTTTEE---------EEEEE-----CSSCEEEEEEEECSSCEEEEEEETTSEEEE--ECSSCSS---CSEEE-ECSS
T ss_pred EEEcCCCCc---------eeecc-----ccCceEEEEEEeCCCCCEEEEccCCCcEEE--EECCCCc---EEEEE-ecCC
Confidence 999864221 01110 111111111111223344555554 34555 5432211 23333 2344
Q ss_pred CceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCC--CCceEEEEEcceEE-EEeC
Q psy15182 197 RPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNS--NGMQLLLCYDNEGV-YVNT 273 (366)
Q Consensus 197 ~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~--~~~E~LLcy~~~~v-fVn~ 273 (366)
....++ .....+.++. ......++|+++............ .....++....+. ....++.+..+-.+ +-|.
T Consensus 172 ~~~~~~---~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 172 RCYCAD---VIYPMAVVAT-AERGLIVYQLENQPSEFRRIESPL--KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp CEEEEE---EETTEEEEEE-GGGCEEEEECSSSCEEEEECCCSC--SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred CceEEE---ecCCeeEEEe-CCCcEEEEEeccccchhhhccccc--cCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 333333 2244454443 356778888875533211111110 1111122222211 11225555543322 2233
Q ss_pred CCce--eeeeeeeeCC-------------CCcEEEEccCC--eEEEE-eCCeEEEEEccCCCEEEEEe
Q psy15182 274 YGKV--SKNILLQWGE-------------MPTSVAYIGTG--QIMGW-GNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 274 ~G~~--sr~~~l~W~~-------------~P~sva~~~~P--Yil~f-~~~~IEIR~v~tg~Lvq~i~ 323 (366)
.... .....+.... ...++++ +.. |++.- ....|.|.++.+|++++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF-HPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE-CTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEE-ecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 3221 1111222221 2556666 332 54444 45679999999999999886
No 10
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.79 E-value=14 Score=33.70 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=47.3
Q ss_pred eeecCCceeEEeEEe---cceEEEeeccee-EEEEecCCCce--EEe------------ecCCceEEEEEec-CCCeEEE
Q psy15182 48 YKKKFGSEILCAALW---GVNLLIGTETGL-MLLDRSGQGKV--YQL------------VNRRRFQQMEVLE-GQNILVT 108 (366)
Q Consensus 48 ~~k~f~~~I~Caa~w---g~~LllGTeeGl-yll~~~~~~~~--~~l------------~~~k~v~Ql~Vle-~~~lLi~ 108 (366)
+.+--...|.|.+.- |+.|+.|+++|. .+.+....... ... .....|..|...+ +.++|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 333345788888753 234889999984 45554321111 110 1445799999998 4445554
Q ss_pred EECCCCeEEEEEchh
Q psy15182 109 ISGKRNRVRVFYLSW 123 (366)
Q Consensus 109 lsGk~~~L~v~~L~~ 123 (366)
++.|+.|++|++..
T Consensus 118 -~~~d~~i~iwd~~~ 131 (408)
T 4a11_B 118 -SSFDKTLKVWDTNT 131 (408)
T ss_dssp -EETTSEEEEEETTT
T ss_pred -EeCCCeEEEeeCCC
Confidence 56899999999865
No 11
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.15 E-value=29 Score=37.65 Aligned_cols=237 Identities=14% Similarity=0.184 Sum_probs=112.8
Q ss_pred ceeEEeEEe--cceEEEeecceeEEEEecCCCceEE-ee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhcccc
Q psy15182 54 SEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQ-LV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKIL 129 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~-l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~ 129 (366)
..+.|.+.- |+.+++|+++|...+..-..++... +. ....|+.+..-++-+.|++ .|.|+.+++|++..-...
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s-~~~dg~i~vwd~~~~~~~-- 1038 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLIS-SSEDSVIQVWNWQTGDYV-- 1038 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEE-ECSSSBEEEEETTTTEEE--
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEE-EcCCCEEEEEECCCCceE--
Confidence 456665533 4559999998865554322222222 22 3347999999888777665 468999999998542210
Q ss_pred ccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCC
Q psy15182 130 KMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGT 209 (366)
Q Consensus 130 ~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~ 209 (366)
...+ ...... ++.......++++.....|.++..... . ..+.+..-......+.+. ..+.
T Consensus 1039 -------~~~~-----~~~~v~--~~~~~~~~~l~~~~~dg~v~vwd~~~~--~---~~~~~~~~~~~v~~~~~s-~d~~ 1098 (1249)
T 3sfz_A 1039 -------FLQA-----HQETVK--DFRLLQDSRLLSWSFDGTVKVWNVITG--R---IERDFTCHQGTVLSCAIS-SDAT 1098 (1249)
T ss_dssp -------CCBC-----CSSCEE--EEEECSSSEEEEEESSSEEEEEETTTT--C---CCEEEECCSSCCCCEEEC-SSSS
T ss_pred -------EEec-----CCCcEE--EEEEcCCCcEEEEECCCcEEEEECCCC--c---eeEEEcccCCcEEEEEEC-CCCC
Confidence 0000 011111 122223334555555555555443221 1 222332111222222221 1233
Q ss_pred eEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEE-EEcc--eEEEEeC-CCceeeee----
Q psy15182 210 RLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLL-CYDN--EGVYVNT-YGKVSKNI---- 281 (366)
Q Consensus 210 ~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LL-cy~~--~~vfVn~-~G~~sr~~---- 281 (366)
.+..| +......+.|++++.....+. .+ .....++ .... + +.+|+ +-++ .-+| |. .|+..+..
T Consensus 1099 ~l~s~-s~d~~v~iwd~~~~~~~~~l~-~h---~~~v~~~-~~s~-d-g~~lat~~~dg~i~vw-d~~~~~~~~~~~~~~ 1169 (1249)
T 3sfz_A 1099 KFSST-SADKTAKIWSFDLLSPLHELK-GH---NGCVRCS-AFSL-D-GILLATGDDNGEIRIW-NVSDGQLLHSCAPIS 1169 (1249)
T ss_dssp SCEEE-CCSSCCCEECSSSSSCSBCCC-CC---SSCEEEE-EECS-S-SSEEEEEETTSCCCEE-ESSSSCCCCCCCCCC
T ss_pred EEEEE-cCCCcEEEEECCCcceeeeec-cC---CCcEEEE-EECC-C-CCEEEEEeCCCEEEEE-ECCCCceEEEecccc
Confidence 34332 222345677887665433221 11 1111222 2222 1 34444 3332 2233 32 34432221
Q ss_pred ----eeeeCCCCcEEEEccCC-eEEEEeCCeEEEEEccCCCEEEEEe
Q psy15182 282 ----LLQWGEMPTSVAYIGTG-QIMGWGNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 282 ----~l~W~~~P~sva~~~~P-Yil~f~~~~IEIR~v~tg~Lvq~i~ 323 (366)
.....+..+++++ ... -.++.....|.+.++.+|+.++++.
T Consensus 1170 ~~~~~~~~~~~v~~l~f-s~dg~~l~s~~g~v~vwd~~~g~~~~~~~ 1215 (1249)
T 3sfz_A 1170 VEEGTATHGGWVTDVCF-SPDSKTLVSAGGYLKWWNVATGDSSQTFY 1215 (1249)
T ss_dssp -------CCSCCCEEEE-CTTSSCEEEESSSEEEBCSSSCBCCCCCC
T ss_pred ccccccccCceEEEEEE-CCCCCEEEECCCeEEEEECCCCceeeeee
Confidence 1234555777887 332 2444556899999999999888775
No 12
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=86.66 E-value=19 Score=32.91 Aligned_cols=255 Identities=13% Similarity=0.138 Sum_probs=123.9
Q ss_pred CceeEEeEEecceEEEeecceeEEE-EecCCC------ceEEeec-CCceEEEEEecC---CC---eEEEEECCCCeEEE
Q psy15182 53 GSEILCAALWGVNLLIGTETGLMLL-DRSGQG------KVYQLVN-RRRFQQMEVLEG---QN---ILVTISGKRNRVRV 118 (366)
Q Consensus 53 ~~~I~Caa~wg~~LllGTeeGlyll-~~~~~~------~~~~l~~-~k~v~Ql~Vle~---~~---lLi~lsGk~~~L~v 118 (366)
...|.|.+.-.+.|+.|..+|...+ +..... .+..+.. ...|..+...++ .+ -+|+..+.|+.|++
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEE
Confidence 4678887644444889988886555 443222 2333333 348999999987 23 34444567999999
Q ss_pred EEchhhhccccccCCcceeeeeeeEeecCC----CceEEEEEEE----cCeEE-EEEEE-CCcEEEEEecC------CCc
Q psy15182 119 FYLSWLKSKILKMDGQVERRNGWINVGDLQ----GAVHFRIVKY----ERIKF-LVIAL-KDSIEIYAWAP------KPY 182 (366)
Q Consensus 119 ~~L~~L~~~~~~~~~~l~k~kg~~~v~~~k----gc~~f~v~~~----~~~~~-LcvA~-k~~i~iy~w~~------~p~ 182 (366)
|++..-... ....+.. +.... .....++... ....+ |+++- ...|.+|.... ...
T Consensus 96 w~~~~~~~~---~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 96 YRITREDET---KKVIFEK------LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EEEEECTTT---CCEEEEE------ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EEccCCccc---cccccee------ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 998653210 0000000 11010 1222333333 22333 44444 45677766654 111
Q ss_pred cccceeeeec-------ccCCCceEEEEeeecCCeEEEEEecC-CceEEEECCCCceEEeecCC--CCCCCCcceEEEEe
Q psy15182 183 HKFMAFKSFG-------ELGYRPLLVDLTVEEGTRLKVIYGSA-DGFHAVDLDSAMVYDIYLPK--HIQGPICPHCIVAL 252 (366)
Q Consensus 183 ~kF~~~Kef~-------~lp~~p~~v~l~v~~~~~l~V~~g~~-~gF~~idl~~~~~~~L~~p~--~~~~~~~p~~I~~l 252 (366)
-.|.....+. .-......+.+ .... .+..++. ....++|++++.....+... +........++..-
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDI--SERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEE--CTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred eeccCcceeeeeeccccCCCCCceEEEE--CCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 1121111221 01222333332 2223 3333443 45778999887665544220 10001112233222
Q ss_pred cCCCCceEEEEEcc----eEEEEeC-CCceeeeeeee------------eCCCCcEEEEcc--CCeEEEEe-CCeEEEEE
Q psy15182 253 PNSNGMQLLLCYDN----EGVYVNT-YGKVSKNILLQ------------WGEMPTSVAYIG--TGQIMGWG-NKAIEIRS 312 (366)
Q Consensus 253 ~~~~~~E~LLcy~~----~~vfVn~-~G~~sr~~~l~------------W~~~P~sva~~~--~PYil~f~-~~~IEIR~ 312 (366)
++ +.-++.+.++ .-...|. .|+..+.+.-. -.....++++ . ..||+.-. ...|.|.+
T Consensus 243 ~~--~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 243 PQ--GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF-NDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp SS--TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE-CSSSSEEEEEETTSEEEEEE
T ss_pred CC--CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE-CCCCCEEEEEeCCCeEEEEE
Confidence 22 3445555544 3333453 45444433220 2445567777 4 33555444 46799999
Q ss_pred ccCCCEEEEEe
Q psy15182 313 VETGHLDGVFM 323 (366)
Q Consensus 313 v~tg~Lvq~i~ 323 (366)
+.+++.++++.
T Consensus 320 ~~~~~~~~~~~ 330 (397)
T 1sq9_A 320 VKTKERITTLN 330 (397)
T ss_dssp TTTTEEEEEEE
T ss_pred cCCCceeEEEe
Confidence 99999999987
No 13
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=86.23 E-value=23 Score=33.45 Aligned_cols=289 Identities=9% Similarity=0.039 Sum_probs=136.4
Q ss_pred CCceeEEeEEecc-eEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecC-CCeEEEEECCCCeEEEEEchhhhcc
Q psy15182 52 FGSEILCAALWGV-NLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEG-QNILVTISGKRNRVRVFYLSWLKSK 127 (366)
Q Consensus 52 f~~~I~Caa~wg~-~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~-~~lLi~lsGk~~~L~v~~L~~L~~~ 127 (366)
-...|.|.+.-.+ .|+.|..+|...+-.-..++....+ ....|..+.+.+. .+-+++..+.|+.+++|++..-...
T Consensus 161 h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp CSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 3467777765433 4888888886655432233333333 2347999999853 3344555568999999998653311
Q ss_pred ccc-c---CCcc---eeeee-eeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCce
Q psy15182 128 ILK-M---DGQV---ERRNG-WINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPL 199 (366)
Q Consensus 128 ~~~-~---~~~l---~k~kg-~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~ 199 (366)
... . .+.. +.... .............++. ..+..+++......|.+|.... ...++.+..-.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~ 314 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS-GHGNIVVSGSYDNTLIVWDVAQ-----MKCLYILSGHTDRIY 314 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE-EETTEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEE
T ss_pred ccccccCCcceEeeccCCCeEEEEEccCccceEEEEc-CCCCEEEEEeCCCeEEEEECCC-----CcEEEEecCCCCCEE
Confidence 000 0 0000 00000 0000001111122222 2333333333344565544322 123334321111222
Q ss_pred EEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-cceEEEEeCCCcee
Q psy15182 200 LVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-DNEGVYVNTYGKVS 278 (366)
Q Consensus 200 ~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~~~~vfVn~~G~~s 278 (366)
.+.+. ..+..+..| +....-.+.|++++.....+.. +. .+...+... +..++-+- |....+-|.....
T Consensus 315 ~~~~~-~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~-h~----~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~- 383 (464)
T 3v7d_B 315 STIYD-HERKRCISA-SMDTTIRIWDLENGELMYTLQG-HT----ALVGLLRLS---DKFLVSAAADGSIRGWDANDYS- 383 (464)
T ss_dssp EEEEE-TTTTEEEEE-ETTSCEEEEETTTTEEEEEECC-CS----SCEEEEEEC---SSEEEEEETTSEEEEEETTTCC-
T ss_pred EEEEc-CCCCEEEEE-eCCCcEEEEECCCCcEEEEEeC-CC----CcEEEEEEc---CCEEEEEeCCCcEEEEECCCCc-
Confidence 22221 123344443 2234578999998876554422 21 111222222 23333333 3333333443221
Q ss_pred eeeeeeeCCCCcE--EEEccCCeEEEEeCCeEEEEEccCCCEEEEEeccCCCceeEEEEeCCEEEEEeCCCCCeeEEEEE
Q psy15182 279 KNILLQWGEMPTS--VAYIGTGQIMGWGNKAIEIRSVETGHLDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHCQIYFM 356 (366)
Q Consensus 279 r~~~l~W~~~P~s--va~~~~PYil~f~~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~~~ 356 (366)
+...+.-...... +.. ...++.+-..+.|.|.++++|++++.+.......+.-+.-.++.++++. ..++...+|.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~-~~~g~~~i~~l 461 (464)
T 3v7d_B 384 RKFSYHHTNLSAITTFYV-SDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAV-EKDGQSFLEIL 461 (464)
T ss_dssp EEEEEECTTCCCEEEEEE-CSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEE-EETTEEEEEEE
T ss_pred eeeeecCCCCccEEEEEe-CCCEEEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEE-EeCCeEEEEEe
Confidence 2222222222332 333 3456766678999999999999998743333344444444555554444 45667888888
Q ss_pred ecC
Q psy15182 357 TLN 359 (366)
Q Consensus 357 ~~~ 359 (366)
.++
T Consensus 462 dfs 464 (464)
T 3v7d_B 462 DFS 464 (464)
T ss_dssp ECC
T ss_pred ecC
Confidence 753
No 14
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=84.42 E-value=24 Score=32.15 Aligned_cols=236 Identities=10% Similarity=0.063 Sum_probs=112.8
Q ss_pred ceeEEeEEe--cc-eEEEeecce-eEEEEe----cCCC------ceEEeec-----------CCceEEEEEecCCCeEEE
Q psy15182 54 SEILCAALW--GV-NLLIGTETG-LMLLDR----SGQG------KVYQLVN-----------RRRFQQMEVLEGQNILVT 108 (366)
Q Consensus 54 ~~I~Caa~w--g~-~LllGTeeG-lyll~~----~~~~------~~~~l~~-----------~k~v~Ql~Vle~~~lLi~ 108 (366)
..|.|.+.- |+ .|+.|+.+| +.+.+. .... ....+-. ...|+.|..-++-++|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 567776533 56 689999888 445455 3211 1222222 237999999988777765
Q ss_pred EECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCCccccce
Q psy15182 109 ISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKPYHKFMA 187 (366)
Q Consensus 109 lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p~~kF~~ 187 (366)
- +.++.|++|+.+. .... .+. + ......++.......+|+++-. ..|.++..... ..
T Consensus 126 ~-~~dg~i~i~~~~~---~~~~---~~~---~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-----~~ 183 (425)
T 1r5m_A 126 G-VENGELRLWNKTG---ALLN---VLN---F-------HRAPIVSVKWNKDGTHIISMDVENVTILWNVISG-----TV 183 (425)
T ss_dssp E-ETTSCEEEEETTS---CEEE---EEC---C-------CCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT-----EE
T ss_pred E-eCCCeEEEEeCCC---Ceee---ecc---C-------CCccEEEEEECCCCCEEEEEecCCeEEEEECCCC-----cE
Confidence 4 5788999998321 1000 000 0 0111222222222334444443 45666554321 12
Q ss_pred eeeecccCCC----------------ceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEE
Q psy15182 188 FKSFGELGYR----------------PLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVA 251 (366)
Q Consensus 188 ~Kef~~lp~~----------------p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~ 251 (366)
.+.+. .+.. ...+. ...+..+.++ +......++|+.++.....+.. + .....++ .
T Consensus 184 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~-~---~~~i~~~-~ 254 (425)
T 1r5m_A 184 MQHFE-LKETGGSSINAENHSGDGSLGVDVE--WVDDDKFVIP-GPKGAIFVYQITEKTPTGKLIG-H---HGPISVL-E 254 (425)
T ss_dssp EEEEC-CC---------------CCCBSCCE--EEETTEEEEE-CGGGCEEEEETTCSSCSEEECC-C---SSCEEEE-E
T ss_pred EEEee-ccccCccceeeccccCCcceeeEEE--EcCCCEEEEE-cCCCeEEEEEcCCCceeeeecc-C---CCceEEE-E
Confidence 22221 1111 11111 1234444443 3345677889887755444421 1 1111222 2
Q ss_pred ecCCCCceEEEEEcc-eEEEEeCC-CceeeeeeeeeCCCCcEEEEccCC-eEE-EEeCCeEEEEEccCCCEEEEEe
Q psy15182 252 LPNSNGMQLLLCYDN-EGVYVNTY-GKVSKNILLQWGEMPTSVAYIGTG-QIM-GWGNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 252 l~~~~~~E~LLcy~~-~~vfVn~~-G~~sr~~~l~W~~~P~sva~~~~P-Yil-~f~~~~IEIR~v~tg~Lvq~i~ 323 (366)
... ++..++.+..+ .....|.. |+...... .-.....++++ ... +++ +-....|.+.++.+++.++.+.
T Consensus 255 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 255 FND-TNKLLLSASDDGTLRIWHGGNGNSQNCFY-GHSQSIVSASW-VGDDKVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp EET-TTTEEEEEETTSCEEEECSSSBSCSEEEC-CCSSCEEEEEE-ETTTEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ECC-CCCEEEEEcCCCEEEEEECCCCccceEec-CCCccEEEEEE-CCCCEEEEEeCCCcEEEEECCCCcEeEecc
Confidence 222 23345555533 33333433 22222221 12344566676 343 433 3445789999999999998886
No 15
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.32 E-value=24 Score=32.05 Aligned_cols=98 Identities=8% Similarity=-0.078 Sum_probs=51.3
Q ss_pred CceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEE--EcceEEEEeCC-Ccee-eeeeeeeCCCCcEEEE
Q psy15182 219 DGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLC--YDNEGVYVNTY-GKVS-KNILLQWGEMPTSVAY 294 (366)
Q Consensus 219 ~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLc--y~~~~vfVn~~-G~~s-r~~~l~W~~~P~sva~ 294 (366)
....+.|++++....+....+ .....++..-++ +.+|.+ .|..-..-|.. |+.. ..+...-.+...++++
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~---~~~i~~~~~~pd---g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~f 222 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKS---DVEYSSGVLHKD---SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKF 222 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCS---SCCCCEEEECTT---SCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEE
T ss_pred CcEEEEECCCCcEEEEEecCC---CCceEEEEECCC---CCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEE
Confidence 456788998887755543221 111223332222 344443 34444444543 2222 2222212445667777
Q ss_pred ccCC--eEEEEeCCeEEEEEccCCCEEEEEe
Q psy15182 295 IGTG--QIMGWGNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 295 ~~~P--Yil~f~~~~IEIR~v~tg~Lvq~i~ 323 (366)
+.. +++.-..+.|.|.++.++..++++.
T Consensus 223 -s~~g~~l~s~~~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 223 -ADNGYWMVVECDQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp -CTTSSEEEEEESSBEEEEETTSSTTCBSSC
T ss_pred -eCCCCEEEEEeCCeEEEEEcCCCCcceeec
Confidence 433 6666667888888999987765543
No 16
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.01 E-value=40 Score=34.34 Aligned_cols=248 Identities=8% Similarity=0.001 Sum_probs=120.5
Q ss_pred eecCCceeEEeEEe--cceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhh
Q psy15182 49 KKKFGSEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 49 ~k~f~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L 124 (366)
.+--+..|.|.+.- |..|+.|+.+|.-.+..-..++..+.+ ...+|+.+...++.+.|++-+ .++.|++|++..-
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTG 87 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTC
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCC
Confidence 33345778888533 445999999985544432223333322 334799999999888877654 6899999998542
Q ss_pred hccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCCccccceeeeecccCCCceEEEE
Q psy15182 125 KSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDL 203 (366)
Q Consensus 125 ~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l 203 (366)
.. +.. +.... -...++.......+|+++-. ..|.+|.+..+. ...+.+..-......+.+
T Consensus 88 ~~--------~~~------~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 88 EK--------VVD------FEAHP-DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----ALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp CE--------EEE------EECCS-SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----EEEEEEECCSSCEEEEEE
T ss_pred cE--------EEE------EecCC-CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----eEEEEEcCCCCcEEEEEE
Confidence 21 000 00001 11122223333344555554 467777765421 122233211222223322
Q ss_pred eeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcce-EEEEeC-CCceeeee
Q psy15182 204 TVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNE-GVYVNT-YGKVSKNI 281 (366)
Q Consensus 204 ~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~-~vfVn~-~G~~sr~~ 281 (366)
....+..+..|. ......+.|+.++.....+.. +.. ....++.--+..++.-++.+.++- -..-|. .|+....
T Consensus 149 ~p~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~-~~~--~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~- 223 (814)
T 3mkq_A 149 NPKDPSTFASGC-LDRTVKVWSLGQSTPNFTLTT-GQE--RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT- 223 (814)
T ss_dssp ETTEEEEEEEEE-TTSEEEEEETTCSSCSEEEEC-CCT--TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE-
T ss_pred EcCCCCEEEEEe-CCCeEEEEECCCCcceeEEec-CCC--CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE-
Confidence 110122333332 234567889876654433321 111 111222222211233444444332 222343 3333222
Q ss_pred eeee-CCCCcEEEEccC--CeEEEEe-CCeEEEEEccCCCEEEEEe
Q psy15182 282 LLQW-GEMPTSVAYIGT--GQIMGWG-NKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 282 ~l~W-~~~P~sva~~~~--PYil~f~-~~~IEIR~v~tg~Lvq~i~ 323 (366)
+.. .....++++ +. ++++.-+ ...|.+.++.++..++++.
T Consensus 224 -~~~~~~~v~~~~~-~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 224 -LEGHMSNVSFAVF-HPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp -EECCSSCEEEEEE-CSSSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred -EcCCCCCEEEEEE-cCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 221 233455666 33 3444444 4779999999999999886
No 17
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=83.73 E-value=26 Score=32.00 Aligned_cols=238 Identities=14% Similarity=0.138 Sum_probs=123.4
Q ss_pred ceeEEeEEe--cceEEEe-ec-ceeEEEEecCCCceEEeec-CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccc
Q psy15182 54 SEILCAALW--GVNLLIG-TE-TGLMLLDRSGQGKVYQLVN-RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKI 128 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllG-Te-eGlyll~~~~~~~~~~l~~-~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~ 128 (366)
..+.|.+.- |+.|+++ .. .-+++.+.. .+++.+.+. ...+..+.+-++.+.|++....++.|++|++..-..
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-- 108 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-- 108 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECC-CCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE--
Confidence 446665432 3446444 34 446666653 233433333 347999999998887777666779999999854221
Q ss_pred cccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecC
Q psy15182 129 LKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEG 208 (366)
Q Consensus 129 ~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~ 208 (366)
... +....+ ...+......++|.++....=.++.|..... + ..+.+ .....|..+.+. ..+
T Consensus 109 -------~~~-----~~~~~~--~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~--~~~~~-~~~~~~~~~~~~-~dg 169 (391)
T 1l0q_A 109 -------AGT-----VKTGKS--PLGLALSPDGKKLYVTNNGDKTVSVINTVTK-A--VINTV-SVGRSPKGIAVT-PDG 169 (391)
T ss_dssp -------EEE-----EECSSS--EEEEEECTTSSEEEEEETTTTEEEEEETTTT-E--EEEEE-ECCSSEEEEEEC-TTS
T ss_pred -------EEE-----EeCCCC--cceEEECCCCCEEEEEeCCCCEEEEEECCCC-c--EEEEE-ecCCCcceEEEC-CCC
Confidence 000 111111 1223333333444444333334555654321 1 22333 234445443321 123
Q ss_pred CeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE----cceEEEEeCC-Cceeeeeee
Q psy15182 209 TRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY----DNEGVYVNTY-GKVSKNILL 283 (366)
Q Consensus 209 ~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy----~~~~vfVn~~-G~~sr~~~l 283 (366)
..+.+.-.......++|+.++.....+.. ...+..+..-+ ++..++.+- +......|.. |+.......
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~--~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSVIDTVKV-----EAAPSGIAVNP--EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC-----SSEEEEEEECT--TSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEec-----CCCccceEECC--CCCEEEEEecCcCCCcEEEEECCCCeEEEEEec
Confidence 34534323234578999998876655522 11233333222 233455543 3444555754 444443333
Q ss_pred eeCCCCcEEEEccC--CeEEEE--eCCeEEEEEccCCCEEEEEe
Q psy15182 284 QWGEMPTSVAYIGT--GQIMGW--GNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 284 ~W~~~P~sva~~~~--PYil~f--~~~~IEIR~v~tg~Lvq~i~ 323 (366)
...|.++++ .. .+|++- ..+.|.+.++.+|++++++.
T Consensus 243 --~~~~~~~~~-s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 243 --GPDPAGIAV-TPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp --CSSEEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred --CCCccEEEE-ccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 345778887 43 256433 35889999999999999985
No 18
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=81.77 E-value=31 Score=31.47 Aligned_cols=255 Identities=11% Similarity=0.105 Sum_probs=126.1
Q ss_pred EEEeecce-eEEEEecCCCceEEee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeE
Q psy15182 66 LLIGTETG-LMLLDRSGQGKVYQLV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWIN 143 (366)
Q Consensus 66 LllGTeeG-lyll~~~~~~~~~~l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~ 143 (366)
++.|.++| +++.+.. .++..+.+ ....+..+.+-++-+.|++..+.++.|++|++..-+. .++ +.
T Consensus 5 ~vs~~~d~~v~v~d~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~---------~~~---~~ 71 (391)
T 1l0q_A 5 YIANSESDNISVIDVT-SNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV---------IAT---VP 71 (391)
T ss_dssp EEEETTTTEEEEEETT-TTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE---------EEE---EE
T ss_pred EEEcCCCCEEEEEECC-CCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE---------EEE---EE
Confidence 34454444 5555643 23333333 3346889999888888777777899999999854221 000 00
Q ss_pred eecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEE
Q psy15182 144 VGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHA 223 (366)
Q Consensus 144 v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~ 223 (366)
.+ + ....+.......+|+++-...=.++.|..... + ..+.+ .....+..+.+. ..+..+.+.-.......+
T Consensus 72 ~~---~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~-~--~~~~~-~~~~~~~~~~~s-~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 72 AG---S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN-T--VAGTV-KTGKSPLGLALS-PDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp CS---S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT-E--EEEEE-ECSSSEEEEEEC-TTSSEEEEEETTTTEEEE
T ss_pred CC---C-CccceEECCCCCEEEEEECCCCEEEEEECCCC-e--EEEEE-eCCCCcceEEEC-CCCCEEEEEeCCCCEEEE
Confidence 00 1 12222233333455555543223444543221 1 22333 233344333321 123345343332456789
Q ss_pred EECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEE-E-cceEEEEeCCCce-eeeeeeeeCCCCcEEEEccCC--
Q psy15182 224 VDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLC-Y-DNEGVYVNTYGKV-SKNILLQWGEMPTSVAYIGTG-- 298 (366)
Q Consensus 224 idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLc-y-~~~~vfVn~~G~~-sr~~~l~W~~~P~sva~~~~P-- 298 (366)
+|+.+++....+.. + ..+..+..-++ +..++++ . +..-...|..... ... +.-...|.++++ ...
T Consensus 143 ~d~~~~~~~~~~~~-~----~~~~~~~~~~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~-~~~g~ 212 (391)
T 1l0q_A 143 INTVTKAVINTVSV-G----RSPKGIAVTPD--GTKVYVANFDSMSISVIDTVTNSVIDT--VKVEAAPSGIAV-NPEGT 212 (391)
T ss_dssp EETTTTEEEEEEEC-C----SSEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEEEEE--EECSSEEEEEEE-CTTSS
T ss_pred EECCCCcEEEEEec-C----CCcceEEECCC--CCEEEEEeCCCCEEEEEECCCCeEEEE--EecCCCccceEE-CCCCC
Confidence 99998877665522 1 12333332222 2344343 3 2334445654432 222 233456777777 432
Q ss_pred eEEEE----eCCeEEEEEccCCCEEEEEeccCCCceeEEEEe-CCEEEEEeCCCCCeeEEE
Q psy15182 299 QIMGW----GNKAIEIRSVETGHLDGVFMHKKSQRLKFLCER-NDKVFFSSAKGGGHCQIY 354 (366)
Q Consensus 299 Yil~f----~~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~~-~d~vf~as~~~~~~~~v~ 354 (366)
+++.- ..+.|.+.++.+++.++.+.... ....+..+. +..+|+++. .++.-.+|
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~-~d~~v~v~ 271 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALS-FXNTVSVI 271 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET-TTTEEEEE
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcC-CCCEEEEE
Confidence 44444 35889999999999999886432 212222232 334656552 33344444
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=80.88 E-value=30 Score=30.74 Aligned_cols=274 Identities=10% Similarity=-0.004 Sum_probs=131.3
Q ss_pred CceeEEeEEe--cceEEEeeccee-EEEEecCCCceEEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhcc
Q psy15182 53 GSEILCAALW--GVNLLIGTETGL-MLLDRSGQGKVYQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSK 127 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGl-yll~~~~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~ 127 (366)
...|.|.+.- |+.|+.|+.+|. .+.+.. .++..+.+. ...|..|...++.+.|++- +.|+.|++|++..-...
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSL-NGERLGTLDGHTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQCV 109 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCCEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CchhhhhhhhcCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEE
Confidence 4678887643 345999998884 455543 223333332 3479999999887777655 57899999998542210
Q ss_pred ccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC------CcEEEEEecCCCc-cccc-----eeeeecccC
Q psy15182 128 ILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK------DSIEIYAWAPKPY-HKFM-----AFKSFGELG 195 (366)
Q Consensus 128 ~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k------~~i~iy~w~~~p~-~kF~-----~~Kef~~lp 195 (366)
.+ +. .+....++.......+++++.. ..|.+|....... ..+. ..+.+....
T Consensus 110 ---------~~-----~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 110 ---------AT-----WK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp ---------EE-----EE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred ---------EE-----ee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 00 00 0111222222333345555555 4677776653211 1111 111111111
Q ss_pred C--CceEEEEeeecCCeEEEEEecCCceEEEECCC-CceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEc-ceEEEE
Q psy15182 196 Y--RPLLVDLTVEEGTRLKVIYGSADGFHAVDLDS-AMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYD-NEGVYV 271 (366)
Q Consensus 196 ~--~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~-~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~-~~~vfV 271 (366)
. ....+.+. ..+..+.++.. .....++|+.+ +.....+.. + .....++. ... ++..++.+.. ....+.
T Consensus 174 ~~~~~~~~~~~-~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~---~~~v~~~~-~~~-~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 174 GLDAATVAGWS-TKGKYIIAGHK-DGKISKYDVSNNYEYVDSIDL-H---EKSISDMQ-FSP-DLTYFITSSRDTNSFLV 245 (369)
T ss_dssp TCCCEEEEEEC-GGGCEEEEEET-TSEEEEEETTTTTEEEEEEEC-C---SSCEEEEE-ECT-TSSEEEEEETTSEEEEE
T ss_pred CccceeEEEEc-CCCCEEEEEcC-CCEEEEEECCCCcEeEEEEec-C---CCceeEEE-ECC-CCCEEEEecCCceEEEE
Confidence 1 11222211 12334444322 34567899987 444444422 1 11112232 222 2344555543 334444
Q ss_pred eCC-CceeeeeeeeeCCCCcEEEEccC--CeEEEEeC-C--------------eEEEEEccCCCEEEEEeccCCCceeEE
Q psy15182 272 NTY-GKVSKNILLQWGEMPTSVAYIGT--GQIMGWGN-K--------------AIEIRSVETGHLDGVFMHKKSQRLKFL 333 (366)
Q Consensus 272 n~~-G~~sr~~~l~W~~~P~sva~~~~--PYil~f~~-~--------------~IEIR~v~tg~Lvq~i~~k~~~~lr~L 333 (366)
|.. |+..+.+. -.....++++ .. .+++.-.. + .|.+.++.+++.++++... ...+.-+
T Consensus 246 d~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~ 321 (369)
T 3zwl_B 246 DVSTLQVLKKYE--TDCPLNTAVI-TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-FGPLNTV 321 (369)
T ss_dssp ETTTCCEEEEEE--CSSCEEEEEE-CSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC-SSCEEEE
T ss_pred ECCCCceeeeec--CCCCceeEEe-cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc-cCcEEEE
Confidence 543 44433333 2333444444 22 23333332 3 6888899999999888622 2333333
Q ss_pred EE-eCCEEEEEeCCCCCeeEEEEEe
Q psy15182 334 CE-RNDKVFFSSAKGGGHCQIYFMT 357 (366)
Q Consensus 334 ~~-~~d~vf~as~~~~~~~~v~~~~ 357 (366)
+- ..+.+ +++...++.-.||-+.
T Consensus 322 ~~s~~~~~-l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 322 AISPQGTS-YASGGEDGFIRLHHFE 345 (369)
T ss_dssp EECTTSSE-EEEEETTSEEEEEEEC
T ss_pred EECCCCCE-EEEEcCCCeEEEEECc
Confidence 33 22333 3333345666777654
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=80.77 E-value=30 Score=30.63 Aligned_cols=275 Identities=13% Similarity=0.124 Sum_probs=128.6
Q ss_pred CceeEEeEEe--cceEEEeecceeEEEEecCCCceEEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccc
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKI 128 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~ 128 (366)
...|.|.+.- |+.|+.|..+|...+..-..++..+.+. ...|..+..-++.++|++- +.|+.|++|++..-..
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~-- 99 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKC-- 99 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCE--
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcE--
Confidence 3567777643 3458899988876665322333334332 3479999999887777665 5789999999854210
Q ss_pred cccCCcceeeeeeeEeecCCCceEEEEEEE-cCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCc-eEEEEeee
Q psy15182 129 LKMDGQVERRNGWINVGDLQGAVHFRIVKY-ERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRP-LLVDLTVE 206 (366)
Q Consensus 129 ~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~-~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p-~~v~l~v~ 206 (366)
+..-++ . .....++... ++..++.......|.++..... ...+.+. ....+ ..+.+. .
T Consensus 100 ------~~~~~~------~-~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~-~~~~~v~~~~~~-~ 159 (312)
T 4ery_A 100 ------LKTLKG------H-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-----KCLKTLP-AHSDPVSAVHFN-R 159 (312)
T ss_dssp ------EEEEEC------C-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-----CEEEEEC-CCSSCEEEEEEC-T
T ss_pred ------EEEEcC------C-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----EEEEEec-CCCCcEEEEEEc-C
Confidence 000000 0 0111222222 2333333334445666443321 1233432 11222 222221 1
Q ss_pred cCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-cceEEEEeCC-Cceeeeeeee
Q psy15182 207 EGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-DNEGVYVNTY-GKVSKNILLQ 284 (366)
Q Consensus 207 ~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~~~~vfVn~~-G~~sr~~~l~ 284 (366)
.+..+..| .....-.++|+.++.....+...+ ..+...+....+ +..++.+- |..-.+-|.. |+..+.+.-.
T Consensus 160 ~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 233 (312)
T 4ery_A 160 DGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDD----NPPVSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGH 233 (312)
T ss_dssp TSSEEEEE-ETTSCEEEEETTTCCEEEEECCSS----CCCEEEEEECTT-SSEEEEEETTTEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEE-eCCCcEEEEECCCCceeeEEeccC----CCceEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEEec
Confidence 23334333 223456788998776544332211 122222333321 23333333 3333333443 3332222110
Q ss_pred eCC-CCcEEEE--ccCCeEEEE-eCCeEEEEEccCCCEEEEEeccCCCceeEEEE-eCCEEEEEeCCCCCeeEEEEE
Q psy15182 285 WGE-MPTSVAY--IGTGQIMGW-GNKAIEIRSVETGHLDGVFMHKKSQRLKFLCE-RNDKVFFSSAKGGGHCQIYFM 356 (366)
Q Consensus 285 W~~-~P~sva~--~~~PYil~f-~~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~-~~d~vf~as~~~~~~~~v~~~ 356 (366)
=.. ......+ -...+++.- ....|.+.++.++++++++..-...-..+-.. ....+..++...++.-.+|-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 234 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 000 0111122 012233333 34689999999999999985222222222233 233454455556777778753
No 21
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=79.92 E-value=35 Score=30.90 Aligned_cols=70 Identities=9% Similarity=0.070 Sum_probs=43.5
Q ss_pred CceeEEeEEe--cc-eEEEeecceeEEE-EecCCCceEEeec-CCceEEEEEecCC--CeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GV-NLLIGTETGLMLL-DRSGQGKVYQLVN-RRRFQQMEVLEGQ--NILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~-~LllGTeeGlyll-~~~~~~~~~~l~~-~k~v~Ql~Vle~~--~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.- +. .|+.|+.+|...+ +.. ..+..+.+. ...+..+...+.. +-+++..+.++.|++|++..
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN-TLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETT-TTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC-CCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 4567777643 33 3888888885544 443 333334443 3468888887643 33455556889999999854
No 22
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.79 E-value=35 Score=30.89 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=41.6
Q ss_pred CceeEEeEEe--cceEEEeeccee-EEEEecCCC-ceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GVNLLIGTETGL-MLLDRSGQG-KVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGl-yll~~~~~~-~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.- |+.|+.|..+|. .+.+..... +..+.+ ....|..+...++-++|++- +.|+.|++|++..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTC-SQDRNAYVYEKRP 86 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEE-ETTSSEEEC----
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Confidence 3467776543 445888877774 455543221 222222 23479999999887776665 4789999999865
No 23
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=76.46 E-value=52 Score=31.07 Aligned_cols=244 Identities=12% Similarity=0.035 Sum_probs=115.9
Q ss_pred ceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcE
Q psy15182 93 RFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSI 172 (366)
Q Consensus 93 ~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i 172 (366)
.|..+.+-++.+.|++..+.|+.|++|++..-..... ..+.. + .....+ .++.......+|+++-.. -
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~---~~~~~----~--~~~~~v--~~~~~sp~~~~l~~~~~~-g 171 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL---KLRKR----F--CFSKRP--NAISIAEDDTTVIIADKF-G 171 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE---EEEEE----E--ECSSCE--EEEEECTTSSEEEEEETT-S
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee---eeeec----c--cCCCCc--eEEEEcCCCCEEEEEeCC-C
Confidence 4889999999998888888999999999852111000 00000 0 001111 222223333556666553 2
Q ss_pred EEEEecCCCccccc-eeeeecccCCCceEEEEeeecC---CeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceE
Q psy15182 173 EIYAWAPKPYHKFM-AFKSFGELGYRPLLVDLTVEEG---TRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHC 248 (366)
Q Consensus 173 ~iy~w~~~p~~kF~-~~Kef~~lp~~p~~v~l~v~~~---~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~ 248 (366)
.++.|.-....... ..+.+..-......+.+ ... .++.+.-+....-.++|+.++.....+...+. ....+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~---~~v~~ 246 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHL--IKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK---HFVSS 246 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEE--EECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS---SCEEE
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEE--cCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC---CceEE
Confidence 34555421111110 11111111112222322 222 33332222234566888887765543322221 11122
Q ss_pred EEEecCCCCceEEEEEcc-eEEEEeC-CCceeeeeee------------------------eeCCCCcEEEEcc--CCeE
Q psy15182 249 IVALPNSNGMQLLLCYDN-EGVYVNT-YGKVSKNILL------------------------QWGEMPTSVAYIG--TGQI 300 (366)
Q Consensus 249 I~~l~~~~~~E~LLcy~~-~~vfVn~-~G~~sr~~~l------------------------~W~~~P~sva~~~--~PYi 300 (366)
+ .+. ++.-++.+-.+ ...+-|. .|+..+.... .+.....++++ . ..||
T Consensus 247 ~-~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l 322 (450)
T 2vdu_B 247 I-CCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK-SKNLPFV 322 (450)
T ss_dssp E-EEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE-CSSSSEE
T ss_pred E-EEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE-eCCCCEE
Confidence 2 222 33444444433 3333453 4554433321 22334556666 3 3466
Q ss_pred EEEe--CCeEEEEEc--cCC---CEEEEEeccCCCceeEEEEeCCEEEEEeCCCCCe------eEEEEEecC
Q psy15182 301 MGWG--NKAIEIRSV--ETG---HLDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGH------CQIYFMTLN 359 (366)
Q Consensus 301 l~f~--~~~IEIR~v--~tg---~Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~------~~v~~~~~~ 359 (366)
++-. .+.|-|..+ .++ ..++++... ..+.-++-..+.++++....... -+||-++..
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 6554 578999999 777 778887632 33444444446666665433222 378877653
No 24
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=75.95 E-value=52 Score=30.83 Aligned_cols=266 Identities=8% Similarity=0.045 Sum_probs=127.4
Q ss_pred ceeEEeEEecceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhcccccc
Q psy15182 54 SEILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKM 131 (366)
Q Consensus 54 ~~I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~ 131 (366)
..|.|.+.=|+.|+.|+.+|...+..-..++..+.+ ....|..+.. +.++ ++..+.|+.|++|++..-..
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~-l~sg~~dg~i~vwd~~~~~~----- 205 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERV-IITGSSDSTVRVWDVNTGEM----- 205 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSE-EEEEETTSCEEEEESSSCCE-----
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCE-EEEEcCCCeEEEEECCCCcE-----
Confidence 458888764556999998886555432223333333 2347888877 4444 44456899999999854220
Q ss_pred CCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeE
Q psy15182 132 DGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRL 211 (366)
Q Consensus 132 ~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l 211 (366)
+..-.+ ......++.. .+..++.+.....|.++..... ......+.+..-......+. +.+..+
T Consensus 206 ---~~~~~~-------h~~~v~~l~~-~~~~l~s~s~dg~i~vwd~~~~--~~~~~~~~~~~~~~~v~~~~---~~~~~l 269 (435)
T 1p22_A 206 ---LNTLIH-------HCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASP--TDITLRRVLVGHRAAVNVVD---FDDKYI 269 (435)
T ss_dssp ---EEEECC-------CCSCEEEEEC-CTTEEEEEETTSCEEEEECSSS--SCCEEEEEECCCSSCEEEEE---EETTEE
T ss_pred ---EEEEcC-------CCCcEEEEEE-cCCEEEEeeCCCcEEEEeCCCC--CCceeeeEecCCCCcEEEEE---eCCCEE
Confidence 000000 0011122221 2333344444455666554332 11111122211111112222 245556
Q ss_pred EEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEc-ceEEEEeCC-CceeeeeeeeeCCCC
Q psy15182 212 KVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYD-NEGVYVNTY-GKVSKNILLQWGEMP 289 (366)
Q Consensus 212 ~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~-~~~vfVn~~-G~~sr~~~l~W~~~P 289 (366)
..|-. .....++|++++....-+.. +. ....++ ... +..++.+.. ..-..-|.. |+..+.+.- -.+..
T Consensus 270 ~s~~~-dg~i~vwd~~~~~~~~~~~~-~~---~~v~~~-~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v 339 (435)
T 1p22_A 270 VSASG-DRTIKVWNTSTCEFVRTLNG-HK---RGIACL-QYR---DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELV 339 (435)
T ss_dssp EEEET-TSEEEEEETTTCCEEEEEEC-CS---SCEEEE-EEE---TTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCE
T ss_pred EEEeC-CCeEEEEECCcCcEEEEEcC-CC---CcEEEE-EeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeC-CcCcE
Confidence 55433 34577999998876544421 21 111122 221 234444443 333334543 554433321 23345
Q ss_pred cEEEEccCCeEEEEe-CCeEEEEEccCCC---------EEEEEeccCCCceeEEEEeCCEEEEEeCCCCCeeEEEEEe
Q psy15182 290 TSVAYIGTGQIMGWG-NKAIEIRSVETGH---------LDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHCQIYFMT 357 (366)
Q Consensus 290 ~sva~~~~PYil~f~-~~~IEIR~v~tg~---------Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~~~~ 357 (366)
.++++ ...+++.-+ ...|.|.++.++. .++++..-..+ +.-+.-.+.. +++...++.-.||=+.
T Consensus 340 ~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~--l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 340 RCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-VFRLQFDEFQ--IVSSSHDDTILIWDFL 413 (435)
T ss_dssp EEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC-CCCEEECSSC--EEECCSSSEEEEEC--
T ss_pred EEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC-eEEEEeCCCE--EEEEeCCCEEEEEECC
Confidence 56777 666655444 4679999998887 78877422122 2212223332 3344456666666443
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=75.87 E-value=53 Score=30.81 Aligned_cols=230 Identities=9% Similarity=0.088 Sum_probs=114.1
Q ss_pred eEEeEEecceEEEeecceeEEEEecCCCceEEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCC
Q psy15182 56 ILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDG 133 (366)
Q Consensus 56 I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~ 133 (366)
+.|...-|+.|+.|.++|...+..-..++..+.+. ...|..+..- .+ +++..+.|+.|++|++..-...
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~~~------ 192 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGECI------ 192 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEEE------
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCcEE------
Confidence 56655546669999999866665322333333332 3468877775 34 4444568999999998543210
Q ss_pred cceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEE
Q psy15182 134 QVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKV 213 (366)
Q Consensus 134 ~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V 213 (366)
..-.+ ......++.. .+..++.+.....|.++..... ..++.+..-......+. +.+..+.+
T Consensus 193 --~~~~~-------h~~~v~~~~~-~~~~l~s~s~dg~i~~wd~~~~-----~~~~~~~~~~~~v~~~~---~~~~~l~~ 254 (445)
T 2ovr_B 193 --HTLYG-------HTSTVRCMHL-HEKRVVSGSRDATLRVWDIETG-----QCLHVLMGHVAAVRCVQ---YDGRRVVS 254 (445)
T ss_dssp --EEECC-------CSSCEEEEEE-ETTEEEEEETTSEEEEEESSSC-----CEEEEEECCSSCEEEEE---ECSSCEEE
T ss_pred --EEECC-------CCCcEEEEEe-cCCEEEEEeCCCEEEEEECCCC-----cEEEEEcCCcccEEEEE---ECCCEEEE
Confidence 00000 0011112222 2333333333345555443321 12233321112222332 24555555
Q ss_pred EEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-cceEEEEeC-CCceeeeeeeeeCCCCcE
Q psy15182 214 IYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-DNEGVYVNT-YGKVSKNILLQWGEMPTS 291 (366)
Q Consensus 214 ~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~~~~vfVn~-~G~~sr~~~l~W~~~P~s 291 (366)
|-. ...-.++|++++....-+.. +. ....++ .. ++..++.+. |..-..-|. .|+...... .-.....+
T Consensus 255 ~~~-dg~i~iwd~~~~~~~~~~~~-~~---~~v~~~-~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~ 324 (445)
T 2ovr_B 255 GAY-DFMVKVWDPETETCLHTLQG-HT---NRVYSL-QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSG 324 (445)
T ss_dssp EET-TSCEEEEEGGGTEEEEEECC-CS---SCEEEE-EE---CSSEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEE
T ss_pred EcC-CCEEEEEECCCCcEeEEecC-CC---CceEEE-EE---CCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEE
Confidence 432 34567889887765544421 11 111122 12 234455544 333333343 444433322 12334556
Q ss_pred EEEccCCeEEEEe-CCeEEEEEccCCCEEEEEe
Q psy15182 292 VAYIGTGQIMGWG-NKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 292 va~~~~PYil~f~-~~~IEIR~v~tg~Lvq~i~ 323 (366)
+++ ...+++.-+ ...|.+.++.+|+.++++.
T Consensus 325 ~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 325 MEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp EEE-ETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEE-eCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 677 667765544 5789999999999999986
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=74.77 E-value=53 Score=30.32 Aligned_cols=259 Identities=15% Similarity=0.085 Sum_probs=123.7
Q ss_pred cceEEEee-cce-eEEEEecCCCceEEeecC-------CceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCC
Q psy15182 63 GVNLLIGT-ETG-LMLLDRSGQGKVYQLVNR-------RRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDG 133 (366)
Q Consensus 63 g~~LllGT-eeG-lyll~~~~~~~~~~l~~~-------k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~ 133 (366)
+..++++. ++| +++.+.. .++..+.+.. ..|..+.+-++ +-+++..+.++.|++|++.....
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~~~~------- 203 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKTLAY------- 203 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTTCCE-------
T ss_pred CCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCCceE-------
Confidence 45566654 444 8888864 2333343221 26777887544 44555556789999999854221
Q ss_pred cceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEE
Q psy15182 134 QVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKV 213 (366)
Q Consensus 134 ~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V 213 (366)
..+ +. ..+.....+.......+++++-...=.++.|..+.. ...+.+. ....|..+.+. ..+..+.+
T Consensus 204 --~~~-----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~~~~~~~-~~~~~~~~~~~-~~g~~l~~ 270 (433)
T 3bws_A 204 --KAT-----VD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---LEIRKTD-KIGLPRGLLLS-KDGKELYI 270 (433)
T ss_dssp --EEE-----EE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---EEEEECC-CCSEEEEEEEC-TTSSEEEE
T ss_pred --EEE-----Ec-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---cEEEEec-CCCCceEEEEc-CCCCEEEE
Confidence 000 00 001111122222223344444422223445654321 1233332 23333333221 13344544
Q ss_pred EEe-------cCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEE--EcceEEEEeCC-Cceeeeeee
Q psy15182 214 IYG-------SADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLC--YDNEGVYVNTY-GKVSKNILL 283 (366)
Q Consensus 214 ~~g-------~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLc--y~~~~vfVn~~-G~~sr~~~l 283 (366)
+-. ......++|+.++......... ..+..+..-+ ++..++++ .+......|.. |+..+. +
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~--~g~~l~~~~~~~~~v~v~d~~~~~~~~~--~ 341 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-----GNKRHIVSGN--TENKIYVSDMCCSKIEVYDLKEKKVQKS--I 341 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-----ECEEEEEECS--STTEEEEEETTTTEEEEEETTTTEEEEE--E
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeeccCC-----CCcceEEECC--CCCEEEEEecCCCEEEEEECCCCcEEEE--e
Confidence 321 0125568999888665544211 1222332222 22344444 24444445655 333333 3
Q ss_pred eeCCCCcEEEEccCC--eEEEEeCC----------------eEEEEEccCCCEEEEEeccCCCceeEEE-EeCC-EEEEE
Q psy15182 284 QWGEMPTSVAYIGTG--QIMGWGNK----------------AIEIRSVETGHLDGVFMHKKSQRLKFLC-ERND-KVFFS 343 (366)
Q Consensus 284 ~W~~~P~sva~~~~P--Yil~f~~~----------------~IEIR~v~tg~Lvq~i~~k~~~~lr~L~-~~~d-~vf~a 343 (366)
.-...|.++++ ... ++..-..+ .|.+.++.+|+.++.+.+. ..+.-++ +..+ .++++
T Consensus 342 ~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 342 PVFDKPNTIAL-SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--NQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp ECSSSEEEEEE-CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--SSEEEEEECTTSCEEEEE
T ss_pred cCCCCCCeEEE-cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC--CCCceEEEcCCCCEEEEE
Confidence 34566888888 433 45444432 7888899999999998752 2333333 3333 34444
Q ss_pred eCCCCCeeEEEEE
Q psy15182 344 SAKGGGHCQIYFM 356 (366)
Q Consensus 344 s~~~~~~~~v~~~ 356 (366)
+ ..++.-.||-+
T Consensus 419 ~-~~d~~i~v~~~ 430 (433)
T 3bws_A 419 D-FLDHQIRVYRR 430 (433)
T ss_dssp E-TTTTEEEEEEE
T ss_pred E-CCCCeEEEEEe
Confidence 4 33456666644
No 27
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=74.00 E-value=47 Score=29.33 Aligned_cols=267 Identities=12% Similarity=0.031 Sum_probs=123.5
Q ss_pred ceeEEeEEe--cceEEEeecceeE-EEEecCCC---ceEEe-ecCCceEEEEEecCCCeEEEEECCCCeEEEEEc-hhhh
Q psy15182 54 SEILCAALW--GVNLLIGTETGLM-LLDRSGQG---KVYQL-VNRRRFQQMEVLEGQNILVTISGKRNRVRVFYL-SWLK 125 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGly-ll~~~~~~---~~~~l-~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L-~~L~ 125 (366)
..|.|.+.- |+.|+.|..+|.. +.+..... .+... .....|..+...++.+.+++..+.++.|++|++ ..-.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 456666533 3458888887754 44543222 12222 334589999999887724444568899999998 5422
Q ss_pred ccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccc----cceeeeecccCCCceEE
Q psy15182 126 SKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHK----FMAFKSFGELGYRPLLV 201 (366)
Q Consensus 126 ~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~k----F~~~Kef~~lp~~p~~v 201 (366)
... +.. . .......++....+..++.+.....|.++......-.. ...++.+. .+..+..+
T Consensus 92 ~~~------~~~---~-----~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 156 (342)
T 1yfq_A 92 FQA------LTN---N-----EANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTM 156 (342)
T ss_dssp EEE------CBS---C-----CCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEE
T ss_pred eEe------ccc---c-----CCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEE
Confidence 110 000 0 00011122222223344444444556554432100000 11222221 33333333
Q ss_pred EEeeecCCeEEEEEecCCceEEEECCC-CceE-EeecCCCCCCCCcceEEEEecCCCCceEEEEEcceEEEE---eCCC-
Q psy15182 202 DLTVEEGTRLKVIYGSADGFHAVDLDS-AMVY-DIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNEGVYV---NTYG- 275 (366)
Q Consensus 202 ~l~v~~~~~l~V~~g~~~gF~~idl~~-~~~~-~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~~vfV---n~~G- 275 (366)
. +..+.+.+|.. .....++|+++ +... ......+ .....++..-+ .++..++.+.++-.+.+ +..|
T Consensus 157 ~---~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~---~~~i~~i~~~~-~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 157 D---TNSSRLIVGMN-NSQVQWFRLPLCEDDNGTIEESGL---KYQIRDVALLP-KEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp E---ECSSEEEEEES-TTEEEEEESSCCTTCCCEEEECSC---SSCEEEEEECS-GGGCEEEEEETTSEEEEEECCTTCC
T ss_pred E---ecCCcEEEEeC-CCeEEEEECCccccccceeeecCC---CCceeEEEECC-CCCCEEEEEecCCcEEEEEEcCCCc
Confidence 3 33445545432 44778899987 5421 1111111 11222333222 02345666665544443 2221
Q ss_pred ----ceeeeeeeee--------CCCCcEEEEccC--CeEEEEe-CCeEEEEEccCCCEEEEEeccCCCceeEEEEeCCEE
Q psy15182 276 ----KVSKNILLQW--------GEMPTSVAYIGT--GQIMGWG-NKAIEIRSVETGHLDGVFMHKKSQRLKFLCERNDKV 340 (366)
Q Consensus 276 ----~~sr~~~l~W--------~~~P~sva~~~~--PYil~f~-~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~~~d~v 340 (366)
+....+...= .....++++ +. .+|+.-+ ...|.|.++.+|++++++..-....+.-++..+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l 307 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF-SPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNIL 307 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEE-CTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEE
T ss_pred ccccccceeeecccccccccccceeEEEEEE-cCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeE
Confidence 2222211110 114556666 32 3444434 468999999999999887521022344444333444
Q ss_pred EEEe
Q psy15182 341 FFSS 344 (366)
Q Consensus 341 f~as 344 (366)
..++
T Consensus 308 ~s~s 311 (342)
T 1yfq_A 308 CLAT 311 (342)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=71.70 E-value=55 Score=29.17 Aligned_cols=70 Identities=20% Similarity=0.243 Sum_probs=44.9
Q ss_pred CceeEEeEEe--cceEEEeeccee-EEEEecCCC--ceEEee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GVNLLIGTETGL-MLLDRSGQG--KVYQLV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGl-yll~~~~~~--~~~~l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.- |+.|+.|+.+|. ++.+..+.. .+..+- ....|..|...++.++|++- +.|+.|++|++..
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC-GTDRNAYVWTLKG 83 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEE-cCCCeEEEEECCC
Confidence 3567776543 344888877764 455544221 222232 33489999999987777665 4788999999844
No 29
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=70.05 E-value=15 Score=35.38 Aligned_cols=57 Identities=16% Similarity=0.338 Sum_probs=40.7
Q ss_pred ceEEEeec--ceeEEEEecCCCceEEeecCCceEEEEEecCCC-------eEEEEECC--CCeEEEEEch
Q psy15182 64 VNLLIGTE--TGLMLLDRSGQGKVYQLVNRRRFQQMEVLEGQN-------ILVTISGK--RNRVRVFYLS 122 (366)
Q Consensus 64 ~~LllGTe--eGlyll~~~~~~~~~~l~~~k~v~Ql~Vle~~~-------lLi~lsGk--~~~L~v~~L~ 122 (366)
..++|||+ .||+++|.+|+ ..+-+.-.++.-+++.+++. ++++.... +++|++|.++
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~--~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGK--MLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSC--EEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred ccEEEEEcCCCCEEEEcCCCc--EEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 35899994 79999998654 44545545689999998664 44444444 5899999884
No 30
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=69.91 E-value=31 Score=30.05 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=45.4
Q ss_pred ceeEEeEEe--cceEEEee--cce-eEEEEecCCCceEEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhh
Q psy15182 54 SEILCAALW--GVNLLIGT--ETG-LMLLDRSGQGKVYQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLK 125 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGT--eeG-lyll~~~~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~ 125 (366)
..+.+.... +..+++++ ++| +++.+.. .++..+.+. ...|+.|..-++.++|++- |.|+.|++|++..++
T Consensus 241 ~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~-~~~~~~~l~gH~~~V~~l~~spdg~~l~S~-s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 241 SQVCSILWSPHYKELISGHGFAQNQLVIWKYP-TMAKVAELKGHTSRVLSLTMSPDGATVASA-AADETLRLWRCFELD 317 (318)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSCEEEE-ETTTEEEEECCSCCC
T ss_pred eeeeeeeecccccceEEEEEcCCCEEEEEECC-CCcEEEEEcCCCCCEEEEEEcCCCCEEEEE-ecCCeEEEEECCCCC
Confidence 445555443 45577654 555 5666653 223333332 3589999999988887764 589999999987654
No 31
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=68.40 E-value=88 Score=30.16 Aligned_cols=254 Identities=10% Similarity=0.026 Sum_probs=125.7
Q ss_pred ceeEEeEEe--cceEEEeecceeEEEEecCC----CceEEeec-CCc-eEEEEEec--CCCeEEEEECCCCeEEEEEchh
Q psy15182 54 SEILCAALW--GVNLLIGTETGLMLLDRSGQ----GKVYQLVN-RRR-FQQMEVLE--GQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGlyll~~~~~----~~~~~l~~-~k~-v~Ql~Vle--~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
..|.|.+.- |+.|++|.+..+.+.+.... .....+-. ... |+.|..-+ +-++|++ .+.|+.|++|++..
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s-~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS-GDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEE-EETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEE-ecCCCEEEEEeCCC
Confidence 455555432 45588898877887776422 22333332 347 99999998 7776665 45789999999853
Q ss_pred hhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCc---EEEEEecCCCccccceeeeecccCCCceE
Q psy15182 124 LKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDS---IEIYAWAPKPYHKFMAFKSFGELGYRPLL 200 (366)
Q Consensus 124 L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~---i~iy~w~~~p~~kF~~~Kef~~lp~~p~~ 200 (366)
-.... ....+..+ .+.... ....++.-.....+|+++-..+ ..++.|.... ..+.+..-......
T Consensus 98 ~~~~~-~~~~~~~~-----~~~~~~-~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~-----~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 98 DKESN-SVEVNVKS-----EFQVLA-GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN-----SLGEVSGHSQRINA 165 (615)
T ss_dssp EGGGT-EEEEEEEE-----EEECCS-SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-----EEEECCSCSSCEEE
T ss_pred Ccccc-cccccccc-----hhhccc-ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC-----cceeeecCCccEEE
Confidence 21000 00000000 011111 1122233333345566665543 6788887321 22233211112222
Q ss_pred EEEeeecCC--eEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEE-cceEEEEe-CCCc
Q psy15182 201 VDLTVEEGT--RLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCY-DNEGVYVN-TYGK 276 (366)
Q Consensus 201 v~l~v~~~~--~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy-~~~~vfVn-~~G~ 276 (366)
+.+ .... .+..| +......++|++++.....+.. +........++. ...+++..++.+. |......| ..|+
T Consensus 166 ~~~--~~~~~~~l~~~-~~d~~v~vwd~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 166 CHL--KQSRPMRSMTV-GDDGSVVFYQGPPFKFSASDRT-HHKQGSFVRDVE-FSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp EEE--CSSSSCEEEEE-ETTTEEEEEETTTBEEEEEECS-SSCTTCCEEEEE-ECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred EEE--CCCCCcEEEEE-eCCCcEEEEeCCCcceeeeecc-cCCCCceEEEEE-ECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 222 2232 23333 3235677889888766554421 211010122332 3222133444454 33333445 3455
Q ss_pred eeeeeee---eeCCCCcEEEEccCCeEEEEe-CCeEEEEEccCCCEEEEEecc
Q psy15182 277 VSKNILL---QWGEMPTSVAYIGTGQIMGWG-NKAIEIRSVETGHLDGVFMHK 325 (366)
Q Consensus 277 ~sr~~~l---~W~~~P~sva~~~~PYil~f~-~~~IEIR~v~tg~Lvq~i~~k 325 (366)
..+...- .-.+...++++....+++.-. ...|.+.++.+++.++++...
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 5444311 334455667773133444444 468999999999999998743
No 32
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=67.88 E-value=80 Score=29.52 Aligned_cols=270 Identities=10% Similarity=0.068 Sum_probs=129.6
Q ss_pred eEEeEEecceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCC
Q psy15182 56 ILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDG 133 (366)
Q Consensus 56 I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~ 133 (366)
+.|...=++.|+.|.++|...+..-..++....+ ....|..+...++. +++..+.|+.|++|++..-... .
T Consensus 125 ~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~-----~ 197 (464)
T 3v7d_B 125 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCT-----H 197 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEE-----E
T ss_pred EEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEE-----E
Confidence 5565543555888998886655532233333333 23479999987655 5555678999999998542210 0
Q ss_pred cceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCC-ccccc-----------------eeeeeccc
Q psy15182 134 QVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKP-YHKFM-----------------AFKSFGEL 194 (366)
Q Consensus 134 ~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p-~~kF~-----------------~~Kef~~l 194 (366)
.+ + +........+........+|+.+-. ..|.++...... ..... ....+ .
T Consensus 198 ~~---~-----~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 267 (464)
T 3v7d_B 198 VF---E-----GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL--R 267 (464)
T ss_dssp EE---C-----CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE--C
T ss_pred EE---C-----CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc--c
Confidence 00 0 0011111122222123344444444 456665543211 00000 01111 0
Q ss_pred CCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcce-EEEEeC
Q psy15182 195 GYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNE-GVYVNT 273 (366)
Q Consensus 195 p~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~-~vfVn~ 273 (366)
.+......+ ...+..+.+|-. ...-.+.|+.++.....+.. +. ....++.--+ ++..++.+-.+- -..-|.
T Consensus 268 ~~~~~v~~~-~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~-~~---~~v~~~~~~~--~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 268 GHMASVRTV-SGHGNIVVSGSY-DNTLIVWDVAQMKCLYILSG-HT---DRIYSTIYDH--ERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp CCSSCEEEE-EEETTEEEEEET-TSCEEEEETTTTEEEEEECC-CS---SCEEEEEEET--TTTEEEEEETTSCEEEEET
T ss_pred CccceEEEE-cCCCCEEEEEeC-CCeEEEEECCCCcEEEEecC-CC---CCEEEEEEcC--CCCEEEEEeCCCcEEEEEC
Confidence 111111111 123444544432 45667889988766544421 21 1112222222 233455454332 222343
Q ss_pred -CCceeeeeeeeeCCCCcEEEEccCCeEEEEeC-CeEEEEEccCCCEEEEEeccCCCceeEEEEeCCEEEEEeCCCCCee
Q psy15182 274 -YGKVSKNILLQWGEMPTSVAYIGTGQIMGWGN-KAIEIRSVETGHLDGVFMHKKSQRLKFLCERNDKVFFSSAKGGGHC 351 (366)
Q Consensus 274 -~G~~sr~~~l~W~~~P~sva~~~~PYil~f~~-~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~~~d~vf~as~~~~~~~ 351 (366)
.|+..+.+.- -.....++++ ...+++.-+. ..|.+.++.++.....+.|......-.+...+..+..++ ++.-
T Consensus 340 ~~~~~~~~~~~-h~~~v~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---dg~i 414 (464)
T 3v7d_B 340 ENGELMYTLQG-HTALVGLLRL-SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS---ENQF 414 (464)
T ss_dssp TTTEEEEEECC-CSSCEEEEEE-CSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE---TTEE
T ss_pred CCCcEEEEEeC-CCCcEEEEEE-cCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec---CCeE
Confidence 4554443321 2344567777 6777666555 689999999998887776554333333333444444443 4455
Q ss_pred EEEE
Q psy15182 352 QIYF 355 (366)
Q Consensus 352 ~v~~ 355 (366)
.||=
T Consensus 415 ~iwd 418 (464)
T 3v7d_B 415 NIYN 418 (464)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=66.93 E-value=79 Score=29.10 Aligned_cols=224 Identities=8% Similarity=0.024 Sum_probs=106.1
Q ss_pred ceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-Cc
Q psy15182 93 RFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DS 171 (366)
Q Consensus 93 ~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~ 171 (366)
.+..+.+-+ .+-+++.++.++.|++|++..-............... ....++.......+++.+.. ..
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL----------GFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC----------CEEEEEEEGGGTEEEEEEGGGTE
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC----------CceeEEEEcCCCEEEEEECCCCE
Confidence 455677777 5666666778889999998642210000000000000 01111222222244444433 34
Q ss_pred EEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEE
Q psy15182 172 IEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVA 251 (366)
Q Consensus 172 i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~ 251 (366)
|.+ |..+.. + ..+.+..-...+..+.+. ..+..+.+.-.......++|++++.....+.. ...+..+..
T Consensus 193 v~~--~d~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~ 261 (433)
T 3bws_A 193 VHV--FDLKTL-A--YKATVDLTGKWSKILLYD-PIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----IGLPRGLLL 261 (433)
T ss_dssp EEE--EETTTC-C--EEEEEECSSSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----CSEEEEEEE
T ss_pred EEE--EECCCc-e--EEEEEcCCCCCeeEEEEc-CCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----CCCceEEEE
Confidence 444 543221 1 223332112233333322 12344433322235678899988876554421 112333332
Q ss_pred ecCCCCceEEEEE---------cceEEEEeCC-CceeeeeeeeeCCCCcEEEEccCC--eEEE--EeCCeEEEEEccCCC
Q psy15182 252 LPNSNGMQLLLCY---------DNEGVYVNTY-GKVSKNILLQWGEMPTSVAYIGTG--QIMG--WGNKAIEIRSVETGH 317 (366)
Q Consensus 252 l~~~~~~E~LLcy---------~~~~vfVn~~-G~~sr~~~l~W~~~P~sva~~~~P--Yil~--f~~~~IEIR~v~tg~ 317 (366)
-++ +..++.+- |..-...|.. |+.... +.-...|.++++ ... ++++ ...+.|.+..+.+++
T Consensus 262 ~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~--~~~~~~~~~~~~-~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 262 SKD--GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT--IGPPGNKRHIVS-GNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp CTT--SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE--EEEEECEEEEEE-CSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred cCC--CCEEEEEECCCCccccCCCeEEEEECCCCcEEee--ccCCCCcceEEE-CCCCCEEEEEecCCCEEEEEECCCCc
Confidence 222 23444443 2233345644 443332 223346777877 432 5544 346889999999999
Q ss_pred EEEEEeccCCCceeEEEE--eCCEEEEEeC
Q psy15182 318 LDGVFMHKKSQRLKFLCE--RNDKVFFSSA 345 (366)
Q Consensus 318 Lvq~i~~k~~~~lr~L~~--~~d~vf~as~ 345 (366)
.++.+.+. ..+.-++- .+..+|+++.
T Consensus 337 ~~~~~~~~--~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 337 VQKSIPVF--DKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEEECS--SSEEEEEECTTSSEEEEEEC
T ss_pred EEEEecCC--CCCCeEEEcCCCCEEEEEec
Confidence 99988753 23333333 2345666664
No 34
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=66.61 E-value=86 Score=29.41 Aligned_cols=33 Identities=9% Similarity=0.121 Sum_probs=26.4
Q ss_pred CCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 91 RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 91 ~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|..|...++.+-+++..+.++.|++|++..
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~ 160 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTK 160 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGG
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCC
Confidence 347999999987566666667889999999965
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=65.57 E-value=87 Score=29.13 Aligned_cols=262 Identities=13% Similarity=0.096 Sum_probs=123.3
Q ss_pred Eec-ce-EEEeecceeEEEEecCCCceEEeec----CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCc
Q psy15182 61 LWG-VN-LLIGTETGLMLLDRSGQGKVYQLVN----RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQ 134 (366)
Q Consensus 61 ~wg-~~-LllGTeeGlyll~~~~~~~~~~l~~----~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~ 134 (366)
.|+ .+ |.+|.+.-+|+.+.. .+++.+++. ...|+-|..-++-+.|++ .+.|+.|++|++..-..
T Consensus 112 ~wS~~n~lAvgld~tV~lWd~~-tg~~~~~~~~~~~~~~V~sv~fspdg~~las-gs~Dg~v~iWd~~~~~~-------- 181 (420)
T 4gga_A 112 DWSSGNVLAVALDNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQKR-------- 181 (420)
T ss_dssp EECTTSEEEEEETTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEE--------
T ss_pred EECCCCEEEEEeCCEEEEEECC-CCCEEEEEEecCCCCcEEEEEECCCCCEEEE-EECCCeEEEEEcCCCcE--------
Confidence 574 34 999999999999964 334555543 236999999988776655 45899999999854221
Q ss_pred ceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeee-cCCeEEE
Q psy15182 135 VERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVE-EGTRLKV 213 (366)
Q Consensus 135 l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~-~~~~l~V 213 (366)
+..-.| .. ....++.. ++ .+|+.+-... .+..|....... .+..+. -...... .+... .+..+..
T Consensus 182 ~~~~~~-----h~--~~v~~~s~-~~-~~l~sgs~d~-~i~~~d~~~~~~--~~~~~~-~h~~~~~-~~~~~~~g~~l~s 247 (420)
T 4gga_A 182 LRNMTS-----HS--ARVGSLSW-NS-YILSSGSRSG-HIHHHDVRVAEH--HVATLS-GHSQEVC-GLRWAPDGRHLAS 247 (420)
T ss_dssp EEEECC-----CS--SCEEEEEE-ET-TEEEEEETTS-EEEEEETTSSSC--EEEEEE-CCSSCEE-EEEECTTSSEEEE
T ss_pred EEEEeC-----CC--CceEEEee-CC-CEEEEEeCCC-ceeEeeecccce--eeEEec-cccccee-eeeecCCCCeeee
Confidence 000011 00 11111211 22 2344443332 223333211111 222221 1111111 11112 2333333
Q ss_pred EEecCCceEEEECCCCceEE--eecCCCCCCCCcceEEEEecCCCCceEEEE----EcceEEEEeCC-CceeeeeeeeeC
Q psy15182 214 IYGSADGFHAVDLDSAMVYD--IYLPKHIQGPICPHCIVALPNSNGMQLLLC----YDNEGVYVNTY-GKVSKNILLQWG 286 (366)
Q Consensus 214 ~~g~~~gF~~idl~~~~~~~--L~~p~~~~~~~~p~~I~~l~~~~~~E~LLc----y~~~~vfVn~~-G~~sr~~~l~W~ 286 (366)
+ +......+.|..+++... +....... ....++...+. + ..+|.. .|....+-|.. |+... .+.-.
T Consensus 248 ~-~~D~~v~i~~~~~~~~~~~~~~~~~~~~--~~V~~~~~~p~-~-~~~la~~~gs~D~~I~iwd~~t~~~~~--~~~~~ 320 (420)
T 4gga_A 248 G-GNDNLVNVWPSAPGEGGWVPLQTFTQHQ--GAVKAVAWCPW-Q-SNVLATGGGTSDRHIRIWNVCSGACLS--AVDAH 320 (420)
T ss_dssp E-ETTSCEEEEESSCCSSCSCCSEEECCCS--SCEEEEEECTT-C-TTEEEEEECTTTCEEEEEETTTTEEEE--EEECS
T ss_pred e-eccccceEEeeccccccceeeeeecccC--CceeeeeeCCC-c-ccEEEEEeecCCCEEEEEeCCccccce--eeccc
Confidence 3 323455677877654321 11111111 11112222222 2 333332 23444444543 33322 23334
Q ss_pred CCCcEEEEccCC--eEE-EE--eCCeEEEEEccCCCEEEEEe-ccCCCceeEEEEeCCEEEEEeCCCCCeeEEEEE
Q psy15182 287 EMPTSVAYIGTG--QIM-GW--GNKAIEIRSVETGHLDGVFM-HKKSQRLKFLCERNDKVFFSSAKGGGHCQIYFM 356 (366)
Q Consensus 287 ~~P~sva~~~~P--Yil-~f--~~~~IEIR~v~tg~Lvq~i~-~k~~~~lr~L~~~~d~vf~as~~~~~~~~v~~~ 356 (366)
..+.++++ ... +++ +. ..+.|.|.++.+++.++++. |. ..+.-|+-..|--+++|.-.++.-.||=+
T Consensus 321 ~~v~~~~~-~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~--~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 321 SQVCSILW-SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT--SRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp SCEEEEEE-ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred cceeeeee-cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 44555555 333 344 33 45789999999999999985 43 33444443333223444456778888854
No 36
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=65.33 E-value=79 Score=28.54 Aligned_cols=72 Identities=6% Similarity=0.002 Sum_probs=44.9
Q ss_pred CCceeEEeEEe------c---ceEEEeeccee-EEEEecCCCc-----eEEeec------CCceEEEEEe----cCCCeE
Q psy15182 52 FGSEILCAALW------G---VNLLIGTETGL-MLLDRSGQGK-----VYQLVN------RRRFQQMEVL----EGQNIL 106 (366)
Q Consensus 52 f~~~I~Caa~w------g---~~LllGTeeGl-yll~~~~~~~-----~~~l~~------~k~v~Ql~Vl----e~~~lL 106 (366)
....|.|.+.. | ..|+.|..+|. ++.+...... +..+-. ...|..+... ++.+.+
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence 34678887654 3 44888887774 4555432221 333322 3679999999 888884
Q ss_pred EEEECCCCeEEEEEchh
Q psy15182 107 VTISGKRNRVRVFYLSW 123 (366)
Q Consensus 107 i~lsGk~~~L~v~~L~~ 123 (366)
++..+.++.|++|++..
T Consensus 141 l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEETTSCEEEEEEES
T ss_pred EEEEeCCCcEEEEeCCc
Confidence 55556889999999976
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=63.90 E-value=77 Score=27.91 Aligned_cols=82 Identities=12% Similarity=0.230 Sum_probs=48.9
Q ss_pred CCceee-EeeecCCceeEEeEEe--cceEE-Eeec---ce-eEEEEecCCCce--E-EeecCCceEEEEEecCC--CeEE
Q psy15182 41 DTPEIR-KYKKKFGSEILCAALW--GVNLL-IGTE---TG-LMLLDRSGQGKV--Y-QLVNRRRFQQMEVLEGQ--NILV 107 (366)
Q Consensus 41 ~~p~~~-~~~k~f~~~I~Caa~w--g~~Ll-lGTe---eG-lyll~~~~~~~~--~-~l~~~k~v~Ql~Vle~~--~lLi 107 (366)
++|++. .+.+..+..|.|.+.- |..|+ .|++ +| +.+.+... ++. . .......|..+...++. +-++
T Consensus 5 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 5 EKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH-GDLKLLREIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS-SSEEEEEEEEESSCEEEEECTTCCTTTCCE
T ss_pred ChhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC-CcccceeeecccCcEEEEEEcCCCCCCceE
Confidence 356443 4445566788888644 33544 5554 55 45555542 222 2 22344589999998874 3444
Q ss_pred EEECCCCeEEEEEchh
Q psy15182 108 TISGKRNRVRVFYLSW 123 (366)
Q Consensus 108 ~lsGk~~~L~v~~L~~ 123 (366)
+..+.++.|++|++..
T Consensus 84 ~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEA 99 (357)
T ss_dssp EEEETTSCEEEECTTS
T ss_pred EEecCCCeEEEEeCCC
Confidence 4456889999999864
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=62.53 E-value=90 Score=28.24 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=46.8
Q ss_pred ceeEEeEEe--cceEEEeecceeEEEE-ecCCCceEEee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhh
Q psy15182 54 SEILCAALW--GVNLLIGTETGLMLLD-RSGQGKVYQLV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLK 125 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGlyll~-~~~~~~~~~l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~ 125 (366)
..|.|.+.- +..|+.|+++|...+. ..++ .+..+. ....|..+...++.+-+++..+.|+.|++|++....
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH-EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTSC-EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECCCC-EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 446776543 3459999888866554 3322 222332 235799999998887444555689999999997643
No 39
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=62.27 E-value=1.5e+02 Score=30.61 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=37.2
Q ss_pred ceeEEeEEec-ceEEEeecceeEEEEecCCCceEEeecC--Cc---eEEEEEecCCCeEEEEECCCCeEEEEEch
Q psy15182 54 SEILCAALWG-VNLLIGTETGLMLLDRSGQGKVYQLVNR--RR---FQQMEVLEGQNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 54 ~~I~Caa~wg-~~LllGTeeGlyll~~~~~~~~~~l~~~--k~---v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~ 122 (366)
..|.|...=. .+|.|||+.|++..|.. ..+....... .. |..|...++-++.+.- .+.|+.|+..
T Consensus 88 n~I~~i~~d~~g~lWigT~~Gl~~yd~~-~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t---~~gl~~~~~~ 158 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWIGTRDGLSRYDEE-KDIFQNFFYEKNGKHLQVNGIEEISPEQLLIST---PEGLIMFDIK 158 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSCEEEEETT-TTEEEEECCEETTEECCCCEEEEEETTEEEEEE---TTEEEEEETT
T ss_pred cceeEEEECCCCCEEEEeCCchheeCCC-CCeEEeccccccCCCceEEEEEECCCCCEEEEE---CCceEEEECC
Confidence 4577765322 34999999999999863 2222222111 11 6666655555555443 3568888753
No 40
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=61.93 E-value=1.2e+02 Score=29.29 Aligned_cols=178 Identities=10% Similarity=0.086 Sum_probs=0.0
Q ss_pred CceeEEeEEecceEEEeecceeEEEEe-cCC---------CceEEeecCCceEEEEEecCCCeEEEEECCCCeEEEEEch
Q psy15182 53 GSEILCAALWGVNLLIGTETGLMLLDR-SGQ---------GKVYQLVNRRRFQQMEVLEGQNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 53 ~~~I~Caa~wg~~LllGTeeGlyll~~-~~~---------~~~~~l~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~ 122 (366)
+...+..+.-..-++.|..+|+.+.+. +.. ......++-..|++|.. +.+.|.+- .++.|++|++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~--~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS--TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE--ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE--cCCcEEEEEch
Q ss_pred hhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEE
Q psy15182 123 WLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVD 202 (366)
Q Consensus 123 ~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~ 202 (366)
.|.+.......+ ...+.+.-.... ++++--...|.++..+.....+ +.....++.
T Consensus 115 sl~~~~~~~~~~---------------~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~---------~~~~Vs~v~ 169 (388)
T 1xip_A 115 ELSEFRTVTSFE---------------KPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ---------LAQNVTSFD 169 (388)
T ss_dssp STTCEEEEEECS---------------SCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE---------EEESEEEEE
T ss_pred hhhccCccceee---------------cceeeEEecCCC-EEEEECCCCEEEEEccCCcccc---------ccCCceEEE
Q ss_pred EeeecCCeEEEEEecCCceEEEECCCCc---eEEeecCCCCC----CCCcceEEEEecCCCCceEEEEEcc
Q psy15182 203 LTVEEGTRLKVIYGSADGFHAVDLDSAM---VYDIYLPKHIQ----GPICPHCIVALPNSNGMQLLLCYDN 266 (366)
Q Consensus 203 l~v~~~~~l~V~~g~~~gF~~idl~~~~---~~~L~~p~~~~----~~~~p~~I~~l~~~~~~E~LLcy~~ 266 (366)
|....+.+|.+ ...-.+++.+++. ...+-.|.+.. +......|.-+++ ..||++|..
T Consensus 170 ---WSpkG~~vg~~-dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~---~~flv~y~~ 233 (388)
T 1xip_A 170 ---VTNSQLAVLLK-DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP---QDFLAVFGN 233 (388)
T ss_dssp ---ECSSEEEEEET-TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS---SEEEEEEEC
T ss_pred ---EcCCceEEEEc-CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC---CeEEEEEcC
No 41
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=60.52 E-value=1.9e+02 Score=31.21 Aligned_cols=275 Identities=8% Similarity=0.052 Sum_probs=130.6
Q ss_pred CceeEEeEEe--cceEEEeecceeEEEEecCCCceEE-ee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccc
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQ-LV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKI 128 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~-l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~ 128 (366)
...|.|.+.= |+.|+.|.++|...+..-..++... +- ....|..+..-++-+.|++- +.|+.|++|++..-..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~~~~~~-- 691 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATC-SADKKVKIWDSATGKL-- 691 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCE--
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEECCCCce--
Confidence 4667776532 4459999999965554322222323 22 23479999999888877665 5789999999854210
Q ss_pred cccCCcceeeeeeeEeecCCCceEEEEEEEc--CeEEEEEEECC-cEEEEEecCCCccccceeeeecccCCCceEEEEee
Q psy15182 129 LKMDGQVERRNGWINVGDLQGAVHFRIVKYE--RIKFLVIALKD-SIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTV 205 (366)
Q Consensus 129 ~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~--~~~~LcvA~k~-~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v 205 (366)
.. .+. + .. ....++.-.. ...+++.+-.. .|.++.+... . ..+.+..-......+.+.
T Consensus 692 ~~---~~~---~-----~~--~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~--~---~~~~~~~h~~~v~~~~~s- 752 (1249)
T 3sfz_A 692 VH---TYD---E-----HS--EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK--E---CRNTMFGHTNSVNHCRFS- 752 (1249)
T ss_dssp EE---EEE---C-----CS--SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS--S---EEEEECCCSSCEEEEEEC-
T ss_pred EE---EEc---C-----CC--CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc--c---hhheecCCCCCEEEEEEe-
Confidence 00 000 0 00 0111111111 22344444443 4555444322 1 222332111222222221
Q ss_pred ecCCeEEEEEecCCceEEEECCCCceEEeecCCCC-------C--CCCcceEEEEecCCCCceEEEEEcceEEEEeCC-C
Q psy15182 206 EEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHI-------Q--GPICPHCIVALPNSNGMQLLLCYDNEGVYVNTY-G 275 (366)
Q Consensus 206 ~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~-------~--~~~~p~~I~~l~~~~~~E~LLcy~~~~vfVn~~-G 275 (366)
..+..+..| +......+.|+.++....-+..... . ......++ ... .++..++.+.++.....|.. |
T Consensus 753 p~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s-~dg~~l~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 753 PDDELLASC-SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC-SWS-ADGDKIIVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp SSTTEEEEE-ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC-CBC-TTSSEEEEEETTEEEEEETTTC
T ss_pred cCCCEEEEE-ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE-EEC-CCCCEEEEEcCCcEEEEEecCC
Confidence 123334443 2234577889887654433211100 0 00011111 121 23456666666655555644 3
Q ss_pred ceeeeeeeeeCCCCcEEEEccC--Ce-EEEEeCCeEEEEEccCCCEEEEEeccCCCceeEEEE-eCCEEEEEeCCCCCee
Q psy15182 276 KVSKNILLQWGEMPTSVAYIGT--GQ-IMGWGNKAIEIRSVETGHLDGVFMHKKSQRLKFLCE-RNDKVFFSSAKGGGHC 351 (366)
Q Consensus 276 ~~sr~~~l~W~~~P~sva~~~~--PY-il~f~~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~-~~d~vf~as~~~~~~~ 351 (366)
.........-.....++++ +. .+ +.|-....|.+.++.++..++++... ...+.-++- ..+..++ +...++.-
T Consensus 830 ~~~~~~~~~~~~~v~~~~~-sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l~-s~s~dg~v 906 (1249)
T 3sfz_A 830 GLLAEIHTGHHSTIQYCDF-SPYDHLAVIALSQYCVELWNIDSRLKVADCRGH-LSWVHGVMFSPDGSSFL-TASDDQTI 906 (1249)
T ss_dssp CEEEEEECSSSSCCCEEEE-CSSTTEEEEECSSSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEE-EEETTSCE
T ss_pred CceeEEcCCCCCceEEEEE-cCCCCEEEEEeCCCeEEEEEcCCCceeeecCCC-ccceEEEEECCCCCEEE-EEeCCCeE
Confidence 3333333333455666666 22 22 33444578999999999998887522 223333332 2222222 22345566
Q ss_pred EEEE
Q psy15182 352 QIYF 355 (366)
Q Consensus 352 ~v~~ 355 (366)
.+|-
T Consensus 907 ~vw~ 910 (1249)
T 3sfz_A 907 RVWE 910 (1249)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=57.58 E-value=98 Score=27.04 Aligned_cols=33 Identities=6% Similarity=0.170 Sum_probs=25.4
Q ss_pred CCceEEEEEecCC-CeEEEEECCCCeEEEEEchhh
Q psy15182 91 RRRFQQMEVLEGQ-NILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 91 ~k~v~Ql~Vle~~-~lLi~lsGk~~~L~v~~L~~L 124 (366)
...|+.|.+-|+. ++|++ .|.|+.|++|++..-
T Consensus 38 ~~~V~~v~~sp~~~~~l~S-~s~D~~i~vWd~~~~ 71 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILS-ASRDKTIIMWKLTRD 71 (340)
T ss_dssp SSCEEEEEECTTCTTEEEE-EETTSCEEEEEECCS
T ss_pred cCCEEEEEEeCCCCCEEEE-EcCCCeEEEEECCCC
Confidence 4579999999875 45554 468999999998653
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.37 E-value=1e+02 Score=27.28 Aligned_cols=111 Identities=7% Similarity=-0.014 Sum_probs=63.5
Q ss_pred CceeEEeEEe--cceEEEeecceeE-EEEec-----------------CCCceEEeec--CCceEEEEEecCCCeEEEEE
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLM-LLDRS-----------------GQGKVYQLVN--RRRFQQMEVLEGQNILVTIS 110 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGly-ll~~~-----------------~~~~~~~l~~--~k~v~Ql~Vle~~~lLi~ls 110 (366)
...|.|.+.- ++.|+.|+++|.. +.+.. ..++....+. ...|..+...++.+.|++-
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 220 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV- 220 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE-
T ss_pred CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE-
Confidence 5677777644 3448889888855 44421 1123333332 3479999998887776665
Q ss_pred CCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecC
Q psy15182 111 GKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAP 179 (366)
Q Consensus 111 Gk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~ 179 (366)
+.|+.|++|++..-.. +.. +. .......++.......+|+++....|.+|....
T Consensus 221 ~~d~~i~i~d~~~~~~--------~~~------~~-~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 221 SHDSTVCLADADKKMA--------VAT------LA-SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp ETTTEEEEEEGGGTTE--------EEE------EE-CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred eCCCEEEEEECCCCce--------eEE------Ec-cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 4789999999864321 000 00 001112222223334677777666788877654
No 44
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=55.44 E-value=1e+02 Score=28.05 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=47.6
Q ss_pred CceeEEeEEe--cceEEEeecce--eEEEEecCCCceEEee---cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GVNLLIGTETG--LMLLDRSGQGKVYQLV---NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeG--lyll~~~~~~~~~~l~---~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.- |..|+-|.++| +.+.|......+..+- ....|..+..-++-+.|++- +.|+.|++|++..
T Consensus 195 ~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~-s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 195 TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV-SDKWTLHVFEIFN 271 (355)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE-ETTCEEEEEESSC
T ss_pred CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE-ECCCEEEEEEccC
Confidence 4677877643 34589999999 5666653222233332 34589999999887776665 5789999999854
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=54.97 E-value=1.3e+02 Score=27.53 Aligned_cols=211 Identities=14% Similarity=0.132 Sum_probs=97.8
Q ss_pred CCceEEEEEecCCCeEEEEECC-----CCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEE
Q psy15182 91 RRRFQQMEVLEGQNILVTISGK-----RNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLV 165 (366)
Q Consensus 91 ~k~v~Ql~Vle~~~lLi~lsGk-----~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~Lc 165 (366)
.+.|..+..-++=.+|++-+.. |+.+++|+...-... .++... ..+...+ ..++.-.....+|+
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-----~~~~~~----~~~~~~~--V~~~~~s~d~~~l~ 110 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-----ESLCTA----GVQTEAG--VTDVAWVSEKGILV 110 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-----GGGCSE----EEECSSC--EEEEEEETTTEEEE
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-----eeEecc----cCCCCCC--EEEEEEcCCCCEEE
Confidence 3468888888888887775531 567888775432210 001000 0111111 22333334446666
Q ss_pred EEECCcEEEEEecCCCccccceeeeecccCC--CceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCC
Q psy15182 166 IALKDSIEIYAWAPKPYHKFMAFKSFGELGY--RPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGP 243 (366)
Q Consensus 166 vA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~--~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~ 243 (366)
+.....|.++....+. . .....+....+ ....+.+. ..+..+..| +....-.+.|+++++....+. .+.
T Consensus 111 ~s~dg~v~lWd~~~~~--~-~~~~~~~~~~h~~~V~~v~~s-pdg~~l~sg-s~dg~v~iwd~~~~~~~~~~~-~h~--- 181 (357)
T 4g56_B 111 ASDSGAVELWEILEKE--S-LLVNKFAKYEHDDIVKTLSVF-SDGTQAVSG-GKDFSVKVWDLSQKAVLKSYN-AHS--- 181 (357)
T ss_dssp EETTSCEEEC-----------CCCCEEECCCSSCEEEEEEC-SSSSEEEEE-ETTSCEEEEETTTTEEEEEEC-CCS---
T ss_pred EECCCEEEEeeccccc--e-eEEEeeccCCCCCCEEEEEEC-CCCCEEEEE-eCCCeEEEEECCCCcEEEEEc-CCC---
Confidence 6655666664433211 0 01111111112 22223221 123344443 223446788999887765552 121
Q ss_pred CcceEEEEecCCCCceEEEEEcceEEE-EeC-CCceeeeeeee-eCCCCcEEEEccC--CeEEE--EeCCeEEEEEccCC
Q psy15182 244 ICPHCIVALPNSNGMQLLLCYDNEGVY-VNT-YGKVSKNILLQ-WGEMPTSVAYIGT--GQIMG--WGNKAIEIRSVETG 316 (366)
Q Consensus 244 ~~p~~I~~l~~~~~~E~LLcy~~~~vf-Vn~-~G~~sr~~~l~-W~~~P~sva~~~~--PYil~--f~~~~IEIR~v~tg 316 (366)
....++. ...+.+..++-+..+-.+. -|. .|+......+. -...+.++++ .. +++++ -....|.+.++.++
T Consensus 182 ~~v~~v~-~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~-sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 182 SEVNCVA-ACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW-HPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp SCEEEEE-ECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE-CTTSTTEEEEEESSSCEEEEESSCG
T ss_pred CCEEEEE-EccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhh-hhcccceEEEeecccceeEEECCCC
Confidence 1112332 2222223444555433333 243 34433333322 2344677887 43 34554 44578999999999
Q ss_pred CEEEEEe
Q psy15182 317 HLDGVFM 323 (366)
Q Consensus 317 ~Lvq~i~ 323 (366)
+.++++.
T Consensus 260 ~~~~~~~ 266 (357)
T 4g56_B 260 DSAQTSA 266 (357)
T ss_dssp GGCEEEC
T ss_pred cEeEEEe
Confidence 9999885
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=54.89 E-value=1e+02 Score=26.52 Aligned_cols=81 Identities=4% Similarity=0.048 Sum_probs=50.5
Q ss_pred ceeeEeeecCCceeEEeEEe--cceEEEeeccee-EEEEecC-CC--ceEE-ee-cCCceEEEEEecC-CCeEEEEECCC
Q psy15182 43 PEIRKYKKKFGSEILCAALW--GVNLLIGTETGL-MLLDRSG-QG--KVYQ-LV-NRRRFQQMEVLEG-QNILVTISGKR 113 (366)
Q Consensus 43 p~~~~~~k~f~~~I~Caa~w--g~~LllGTeeGl-yll~~~~-~~--~~~~-l~-~~k~v~Ql~Vle~-~~lLi~lsGk~ 113 (366)
|.++.+.+--...|.|.+.- |+.|+.|..+|. .+.+... .. +... +- ....|+.|...+. .+-+|+..+.|
T Consensus 1 p~~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 1 PHMQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp -CCCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 34455665556788888743 345999999984 4555542 21 1222 22 3457999999874 23344445689
Q ss_pred CeEEEEEchh
Q psy15182 114 NRVRVFYLSW 123 (366)
Q Consensus 114 ~~L~v~~L~~ 123 (366)
+.|++|++..
T Consensus 81 g~v~vwd~~~ 90 (351)
T 3f3f_A 81 KTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECT
T ss_pred CeEEEEecCC
Confidence 9999999854
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=54.47 E-value=1.1e+02 Score=26.58 Aligned_cols=270 Identities=11% Similarity=0.094 Sum_probs=128.6
Q ss_pred CceeEEeEEe--cceEEEeecceeEEEEecCCC---ceEEe---ecCCceEEEEEecCCCeEEEEECCCCeEEEEEchhh
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLMLLDRSGQG---KVYQL---VNRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~---~~~~l---~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L 124 (366)
+..|.|.+.- |+.|+.|.+.-+.+.+..... ....+ .....|..+...++-+.|++- +.++.|++|++..-
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAAP 129 (337)
T ss_dssp SSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCCC
T ss_pred CCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCCC
Confidence 4566666533 334777775555555643211 11121 233479999999887766654 57889999998542
Q ss_pred hccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCCccccceeeeecccCCCceEEEE
Q psy15182 125 KSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDL 203 (366)
Q Consensus 125 ~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l 203 (366)
... ... .+... .....++.......+|+++-. ..|.+|..... ...+.+..-......+.+
T Consensus 130 ~~~-------~~~-----~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-----~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 130 TPR-------IKA-----ELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-----TLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp --E-------EEE-----EEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEE
T ss_pred Ccc-------eee-----ecccC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-----ceeeeeecccCceEEEEE
Confidence 210 000 01100 111122222223344555544 45666544321 123333211222233332
Q ss_pred eeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEc-ceEEEEeCCCceeeeee
Q psy15182 204 TVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYD-NEGVYVNTYGKVSKNIL 282 (366)
Q Consensus 204 ~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~-~~~vfVn~~G~~sr~~~ 282 (366)
. ..+..+.++- ......++|++++.....+.. .....++ .+.. ++..++.+.+ ..-...|..+..... .
T Consensus 192 ~-~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~-----~~~v~~~-~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~-~ 261 (337)
T 1gxr_A 192 S-NDGTKLWTGG-LDNTVRSWDLREGRQLQQHDF-----TSQIFSL-GYCP-TGEWLAVGMESSNVEVLHVNKPDKYQ-L 261 (337)
T ss_dssp C-TTSSEEEEEE-TTSEEEEEETTTTEEEEEEEC-----SSCEEEE-EECT-TSSEEEEEETTSCEEEEETTSSCEEE-E
T ss_pred C-CCCCEEEEEe-cCCcEEEEECCCCceEeeecC-----CCceEEE-EECC-CCCEEEEEcCCCcEEEEECCCCCeEE-E
Confidence 1 1233444432 234567889988866554421 1112222 2222 2345555553 333334554433221 1
Q ss_pred eeeCCCCcEEEEcc--CCeEEEEe-CCeEEEEEccCCCEEEEEeccCCCceeEE-EEeCC-EEEEEeCCCCCeeEEEEE
Q psy15182 283 LQWGEMPTSVAYIG--TGQIMGWG-NKAIEIRSVETGHLDGVFMHKKSQRLKFL-CERND-KVFFSSAKGGGHCQIYFM 356 (366)
Q Consensus 283 l~W~~~P~sva~~~--~PYil~f~-~~~IEIR~v~tg~Lvq~i~~k~~~~lr~L-~~~~d-~vf~as~~~~~~~~v~~~ 356 (366)
..-...+.++++ . ..+++.-. ...|.+..+.+++.+....|.. .+.-+ .+..+ .++.++ .++.-.+|=+
T Consensus 262 ~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~--~dg~i~iw~~ 335 (337)
T 1gxr_A 262 HLHESCVLSLKF-AYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS--SVLSCDISVDDKYIVTGS--GDKKATVYEV 335 (337)
T ss_dssp CCCSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEE--TTSCEEEEEE
T ss_pred cCCccceeEEEE-CCCCCEEEEecCCCcEEEEECCCCeEEEEecCCC--cEEEEEECCCCCEEEEec--CCCeEEEEEE
Confidence 223445666777 4 23444444 5779999999999887766532 23322 22233 333333 4556667644
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=52.95 E-value=16 Score=34.58 Aligned_cols=61 Identities=13% Similarity=0.353 Sum_probs=41.9
Q ss_pred ceEEEeecceeE-EEEecCCCceEEee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhh
Q psy15182 64 VNLLIGTETGLM-LLDRSGQGKVYQLV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLK 125 (366)
Q Consensus 64 ~~LllGTeeGly-ll~~~~~~~~~~l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~ 125 (366)
..|+.|+++|.. +.+.+++ .+..+. ...+|..|..-+..+-+++..+.|+.|++|++....
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp TEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 348889888854 4454432 222222 235799999988877777777789999999986644
No 49
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=52.82 E-value=1.4e+02 Score=27.24 Aligned_cols=70 Identities=10% Similarity=0.107 Sum_probs=47.7
Q ss_pred CceeEEeEEe--cceEEEeecceeEEEEecCCCceEEeecCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQLVNRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~l~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.= |..|+.|+++|+.+.+.+ ..+......-..+.-+.....-+.+++.+|.++.|++|++..
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~~~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKSFEIYNVH-PVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSEEEEEEET-TEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred CCceEEEEECCCCCEEEEEcCCEEEEEecC-CcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 4678887633 445999999998776653 222111112224677788888888888888889999999743
No 50
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=48.73 E-value=2.4e+02 Score=28.91 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=36.0
Q ss_pred ceeEEeEEe-cce-EEEeecc-eeEEEEecCCCceEEee-c--------CCceEEEEEec--CCCeEEEEECCCCeEEEE
Q psy15182 54 SEILCAALW-GVN-LLIGTET-GLMLLDRSGQGKVYQLV-N--------RRRFQQMEVLE--GQNILVTISGKRNRVRVF 119 (366)
Q Consensus 54 ~~I~Caa~w-g~~-LllGTee-Glyll~~~~~~~~~~l~-~--------~k~v~Ql~Vle--~~~lLi~lsGk~~~L~v~ 119 (366)
..|.|...= ..+ |.|||+. |++..+... ....... . ...|..|.... +-+|.+.- .++.|+.|
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t--~~~gl~~~ 142 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYET-QSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCT--YYRGIEYL 142 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTT-TEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEE--SSSCEEEE
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCC-CeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEE--CCCCeeEE
Confidence 346665432 245 9999999 999999642 2222221 1 11466665554 34444422 13467777
Q ss_pred Ec
Q psy15182 120 YL 121 (366)
Q Consensus 120 ~L 121 (366)
+.
T Consensus 143 ~~ 144 (781)
T 3v9f_A 143 DI 144 (781)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 51
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=47.39 E-value=2.5e+02 Score=28.74 Aligned_cols=70 Identities=9% Similarity=0.079 Sum_probs=45.2
Q ss_pred CceeEEeEEe----cceEEEeeccee-EEEEecCCC--ceEEee-cCCceEEEEEecC--CCeEEEEECCCCeEEEEEch
Q psy15182 53 GSEILCAALW----GVNLLIGTETGL-MLLDRSGQG--KVYQLV-NRRRFQQMEVLEG--QNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 53 ~~~I~Caa~w----g~~LllGTeeGl-yll~~~~~~--~~~~l~-~~k~v~Ql~Vle~--~~lLi~lsGk~~~L~v~~L~ 122 (366)
...|.|.+.- |+.|+.|..+|. ++.+..+.. .+.... ....|+.+...++ .+++++ .+.|+.|++|++.
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~ 131 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFK 131 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECC
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEee
Confidence 3567777642 445999999984 455543221 122222 3348999999987 555554 4688999999986
Q ss_pred h
Q psy15182 123 W 123 (366)
Q Consensus 123 ~ 123 (366)
.
T Consensus 132 ~ 132 (753)
T 3jro_A 132 E 132 (753)
T ss_dssp S
T ss_pred c
Confidence 5
No 52
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=46.34 E-value=1.5e+02 Score=25.91 Aligned_cols=246 Identities=8% Similarity=0.001 Sum_probs=111.9
Q ss_pred CceEEEEEecCCCeEEEEECC---CCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcC---eEEEE
Q psy15182 92 RRFQQMEVLEGQNILVTISGK---RNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYER---IKFLV 165 (366)
Q Consensus 92 k~v~Ql~Vle~~~lLi~lsGk---~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~---~~~Lc 165 (366)
..|..+...++.+.+++..+. |+.|++|++..-. ..... ..+..... .++.-... ..+|+
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~---------~~~~~---~~~~~~~v--~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD---------LKLLR---EIEKAKPI--KCGTFGATSLQQRYLA 84 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS---------EEEEE---EEEESSCE--EEEECTTCCTTTCCEE
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc---------cccee---eecccCcE--EEEEEcCCCCCCceEE
Confidence 479999999988777777665 8999999985321 00000 00111111 12212121 24444
Q ss_pred EEE-CCcEEEEEecCCCccccceeeeecccCCCceEEEEe----ee-cCCeEEEEEecCCceEEEECCCCc-eEEeecCC
Q psy15182 166 IAL-KDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLT----VE-EGTRLKVIYGSADGFHAVDLDSAM-VYDIYLPK 238 (366)
Q Consensus 166 vA~-k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~----v~-~~~~l~V~~g~~~gF~~idl~~~~-~~~L~~p~ 238 (366)
++- ...|.+|..... .+ ..+.+..-......+... .. .+..+..| +......+.|++++. ....+.+.
T Consensus 85 ~~~~dg~i~iwd~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAP--EM--PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTG-SRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp EEETTSCEEEECTTSC--SS--CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEE-ETTSCEEEECTTSCSSCSEEECCC
T ss_pred EecCCCeEEEEeCCCC--Cc--cEEEEEecccceEEEeeccccccCCCccEEEEE-eCCCeEEEEeCCCCCCcceecccc
Confidence 444 445666554321 11 122332111222222211 11 22334333 223457788998765 33333221
Q ss_pred CCCCCCcceEEEE-e-cCCCCceEEEEEcc-eEEEEeCCCceeeeeeeeeCCCCcEEEEccC-----Ce-EEEEeCCeEE
Q psy15182 239 HIQGPICPHCIVA-L-PNSNGMQLLLCYDN-EGVYVNTYGKVSKNILLQWGEMPTSVAYIGT-----GQ-IMGWGNKAIE 309 (366)
Q Consensus 239 ~~~~~~~p~~I~~-l-~~~~~~E~LLcy~~-~~vfVn~~G~~sr~~~l~W~~~P~sva~~~~-----PY-il~f~~~~IE 309 (366)
.........++.. + -..++..++.+.++ .-...|....... ....-.....++++ .. .+ +.|-....|.
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~-~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEF-DRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEE-SCSSSSCCEEEEEESTTEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEc-CCCCCCCCEEEEECCCCeEE
Confidence 1100111112211 1 01233455556653 3334465443321 22334556777777 43 33 3444457888
Q ss_pred EEEccCCCEEEEEec----cCCCceeEEEE-eCCEEEEEeCCCCCeeEEEEEec
Q psy15182 310 IRSVETGHLDGVFMH----KKSQRLKFLCE-RNDKVFFSSAKGGGHCQIYFMTL 358 (366)
Q Consensus 310 IR~v~tg~Lvq~i~~----k~~~~lr~L~~-~~d~vf~as~~~~~~~~v~~~~~ 358 (366)
+.++.++...+.+.. .....+.-++- ..+..++++...++.-.||-+.-
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 888888765544420 11223333333 32332444545566777777654
No 53
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=44.65 E-value=1.8e+02 Score=26.22 Aligned_cols=233 Identities=12% Similarity=0.068 Sum_probs=117.0
Q ss_pred eEEeEEecceEEEeec--ceeEEEEecCCCceEE-eecCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccC
Q psy15182 56 ILCAALWGVNLLIGTE--TGLMLLDRSGQGKVYQ-LVNRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMD 132 (366)
Q Consensus 56 I~Caa~wg~~LllGTe--eGlyll~~~~~~~~~~-l~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~ 132 (366)
....+..+.+|++++. ..+.++|.. ..++.+ +-.......|.+.++-.+.++ ...++.|+++++....-
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~-t~~~~~~i~~~~~p~~i~~~~~g~lyv~-~~~~~~v~~iD~~t~~~------ 117 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDIN-TFKEVGRITGFTSPRYIHFLSDEKAYVT-QIWDYRIFIINPKTYEI------ 117 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETT-TCCEEEEEECCSSEEEEEEEETTEEEEE-EBSCSEEEEEETTTTEE------
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECc-ccEEEEEcCCCCCCcEEEEeCCCeEEEE-ECCCCeEEEEECCCCeE------
Confidence 3445556777888876 347788864 233433 323356788888665444333 33477899998865431
Q ss_pred CcceeeeeeeEeec----CCCceEEEEEEEcCeEEEEEEE---CCcEEEEEecCCCccccceeeeecccCCCceEEEEee
Q psy15182 133 GQVERRNGWINVGD----LQGAVHFRIVKYERIKFLVIAL---KDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTV 205 (366)
Q Consensus 133 ~~l~k~kg~~~v~~----~kgc~~f~v~~~~~~~~LcvA~---k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v 205 (366)
.++ +.++. ...-...++ .++ + |.|+- .+.|.++-... ....+.+ .+...|..+. +
T Consensus 118 ---~~~---i~~g~~~~~~~~p~~i~~--~~~-~-lyv~~~~~~~~v~viD~~t-----~~~~~~i-~~g~~p~~i~--~ 179 (328)
T 3dsm_A 118 ---TGY---IECPDMDMESGSTEQMVQ--YGK-Y-VYVNCWSYQNRILKIDTET-----DKVVDEL-TIGIQPTSLV--M 179 (328)
T ss_dssp ---EEE---EECTTCCTTTCBCCCEEE--ETT-E-EEEEECTTCCEEEEEETTT-----TEEEEEE-ECSSCBCCCE--E
T ss_pred ---EEE---EEcCCccccCCCcceEEE--ECC-E-EEEEcCCCCCEEEEEECCC-----CeEEEEE-EcCCCccceE--E
Confidence 000 11111 001111122 222 3 33443 34455544332 1233454 3444554332 2
Q ss_pred ecCCeEEEEE-ec---------CCceEEEECCCCceEEeec-CCCCCCCCcceEEEEecCCCCceEEEEEcceEEEEeCC
Q psy15182 206 EEGTRLKVIY-GS---------ADGFHAVDLDSAMVYDIYL-PKHIQGPICPHCIVALPNSNGMQLLLCYDNEGVYVNTY 274 (366)
Q Consensus 206 ~~~~~l~V~~-g~---------~~gF~~idl~~~~~~~L~~-p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~~vfVn~~ 274 (366)
....++.|.- +. +.....||.++++....+. |. ...|..+..-++ +..|.+-|..-.-+|..
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~----g~~p~~la~~~d---~~~lyv~~~~v~~~d~~ 252 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL----GDWPSEVQLNGT---RDTLYWINNDIWRMPVE 252 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT----TCCCEEEEECTT---SCEEEEESSSEEEEETT
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC----CCCceeEEEecC---CCEEEEEccEEEEEECC
Confidence 2345654432 21 1357899998887664442 21 224555543222 34454445422235654
Q ss_pred -Cceeeeeeeee-CCCCcEEEEccC--CeEEEEe------CCeEEEEEccCCCEEEEEe
Q psy15182 275 -GKVSKNILLQW-GEMPTSVAYIGT--GQIMGWG------NKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 275 -G~~sr~~~l~W-~~~P~sva~~~~--PYil~f~------~~~IEIR~v~tg~Lvq~i~ 323 (366)
|+......+.- ...|.++++ +. .+|.+-. .+.|-+.+.+ |++++++.
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~v-dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTV-NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEE-CTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred CCceeeeeeecCCCCceEEEEE-cCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 33322111221 356899888 43 3454443 6778888887 99988886
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=44.17 E-value=2.2e+02 Score=27.21 Aligned_cols=67 Identities=10% Similarity=0.105 Sum_probs=43.3
Q ss_pred eeEEeEEe---cceEEEeecceeEEEEecCCCceEEee------cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 55 EILCAALW---GVNLLIGTETGLMLLDRSGQGKVYQLV------NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 55 ~I~Caa~w---g~~LllGTeeGlyll~~~~~~~~~~l~------~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
.|.|.+.- |+.|+.|+++|...+..-..++....+ ....|..+... +.+.|++- +.|+.|++|++..
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~-~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV-GADATIRVWDVTT 283 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE-ETTSEEEEEETTT
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE-cCCCcEEEEECCC
Confidence 57777643 234888988885554432223333433 33589999998 55655554 5789999999864
No 55
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=43.24 E-value=1.6e+02 Score=25.20 Aligned_cols=201 Identities=9% Similarity=-0.031 Sum_probs=94.6
Q ss_pred CceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECC-
Q psy15182 92 RRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKD- 170 (366)
Q Consensus 92 k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~- 170 (366)
..|+.|.. ++.+.|++ .+.|+.|++|++..-.. ... +.. ......++.......+|+++-..
T Consensus 19 ~~v~~~~~-~~~~~l~s-~~~dg~v~vw~~~~~~~---------~~~-----~~~-~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVAS-VSRDGTVRLWSKDDQWL---------GTV-----VYT-GQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp SCEEEEEE-EETTEEEE-EETTSEEEEEEESSSEE---------EEE-----EEE-CSSCEEEEEEETTTTEEEEEETTS
T ss_pred CCcEEEEe-cCCCEEEE-EEcCCcEEEEECCCCEE---------EEE-----eec-CCccEEEEEECCCCCEEEEecCCC
Confidence 47888988 66777554 45899999999844211 000 000 01112223233333455555544
Q ss_pred cEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEE
Q psy15182 171 SIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIV 250 (366)
Q Consensus 171 ~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~ 250 (366)
.|.++...... ....++.+..-......+. +.+..+..|-. .....+.| ++.....+.. + .....++.
T Consensus 82 ~i~~~~~~~~~--~~~~~~~~~~~~~~i~~~~---~~~~~l~~~~~-d~~i~~~d--~~~~~~~~~~-~---~~~v~~~~ 149 (313)
T 3odt_A 82 MINGVPLFATS--GEDPLYTLIGHQGNVCSLS---FQDGVVISGSW-DKTAKVWK--EGSLVYNLQA-H---NASVWDAK 149 (313)
T ss_dssp CEEEEETTCCT--TSCC-CEECCCSSCEEEEE---EETTEEEEEET-TSEEEEEE--TTEEEEEEEC-C---SSCEEEEE
T ss_pred eEEEEEeeecC--CCCcccchhhcccCEEEEE---ecCCEEEEEeC-CCCEEEEc--CCcEEEeccc-C---CCceeEEE
Confidence 45655433211 1112223211111112222 24555544332 34455666 3333322311 1 11122333
Q ss_pred EecCCCCceEEEEEcceEEE-EeCCCceeeeeeeeeCCCCcEEEEccCC-eEEEEeCCeEEEEEccCCCEEEEEe
Q psy15182 251 ALPNSNGMQLLLCYDNEGVY-VNTYGKVSKNILLQWGEMPTSVAYIGTG-QIMGWGNKAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 251 ~l~~~~~~E~LLcy~~~~vf-Vn~~G~~sr~~~l~W~~~P~sva~~~~P-Yil~f~~~~IEIR~v~tg~Lvq~i~ 323 (366)
..+. ++..++.+..+-.+. .| .++..+.+...-.....++++.... .+.+-....|.+.++.+++.++.+.
T Consensus 150 ~~~~-~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 150 VVSF-SENKFLTASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEET-TTTEEEEEETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EccC-CCCEEEEEECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh
Confidence 3331 234555555433332 23 4444444433334455666662122 4556666889999999999999986
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=42.83 E-value=2e+02 Score=26.25 Aligned_cols=69 Identities=16% Similarity=0.151 Sum_probs=46.1
Q ss_pred CceeEEeEEe--cce-EEEeeccee-EEEEecCCCceEEee----cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 53 GSEILCAALW--GVN-LLIGTETGL-MLLDRSGQGKVYQLV----NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 53 ~~~I~Caa~w--g~~-LllGTeeGl-yll~~~~~~~~~~l~----~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
...|.|.+.- |.+ |+.|..+|. .+.+.. .++....+ ....|+.|..-++-+.|++- ++|+.|++|++..
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-TGAAVLTLGPDVHPDTIYSVDWSRDGALICTS-CRDKRVRVIEPRK 207 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETT-TTEEEEEECTTTCCSCEEEEEECTTSSCEEEE-ETTSEEEEEETTT
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-CCCccEEEecCCCCCceEEEEECCCCCEEEEE-ecCCcEEEEeCCC
Confidence 3567776533 334 888888884 455543 33343444 33479999999877777665 4889999999865
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=40.98 E-value=1.7e+02 Score=25.03 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=46.1
Q ss_pred CCceeEEeEEe----cceEEEeeccee-EEEEecC-CC-------ceEE-ee-cCCceEEEEEecC--CCeEEEEECCCC
Q psy15182 52 FGSEILCAALW----GVNLLIGTETGL-MLLDRSG-QG-------KVYQ-LV-NRRRFQQMEVLEG--QNILVTISGKRN 114 (366)
Q Consensus 52 f~~~I~Caa~w----g~~LllGTeeGl-yll~~~~-~~-------~~~~-l~-~~k~v~Ql~Vle~--~~lLi~lsGk~~ 114 (366)
-...|.|.+.- ++.|+.|+.+|. .+.+... +. +... +. ....|..+...++ .++|++ .+.|+
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg 134 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC-LGNDG 134 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTC
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE-ecCCC
Confidence 44678887643 334888999884 4555432 11 1222 22 2347999999987 555554 46899
Q ss_pred eEEEEEchhh
Q psy15182 115 RVRVFYLSWL 124 (366)
Q Consensus 115 ~L~v~~L~~L 124 (366)
.|++|++...
T Consensus 135 ~v~iwd~~~~ 144 (351)
T 3f3f_A 135 ILRLYDALEP 144 (351)
T ss_dssp EEEEEECSST
T ss_pred cEEEecCCCh
Confidence 9999998653
No 58
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=39.55 E-value=1.9e+02 Score=25.16 Aligned_cols=52 Identities=10% Similarity=0.048 Sum_probs=34.4
Q ss_pred cceeEEEEecCCCceEEeecC-C--ceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 71 ETGLMLLDRSGQGKVYQLVNR-R--RFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 71 eeGlyll~~~~~~~~~~l~~~-k--~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
+..++++|.. .+++.+.+.. . .+..+.+-++-+.+++..+.++.|+++++..
T Consensus 20 ~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t 74 (349)
T 1jmx_B 20 PNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT 74 (349)
T ss_dssp TTEEEEEETT-TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEECC-CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC
Confidence 4557777754 2333333332 2 4778888888777777667788999999854
No 59
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=38.14 E-value=3.4e+02 Score=27.62 Aligned_cols=64 Identities=17% Similarity=0.220 Sum_probs=35.6
Q ss_pred ceeEEeEEecceEEEeecceeEEEEecCCCceEEe------ecCCceEEEEEecCCCeEEEEECCCCeEEEEEc
Q psy15182 54 SEILCAALWGVNLLIGTETGLMLLDRSGQGKVYQL------VNRRRFQQMEVLEGQNILVTISGKRNRVRVFYL 121 (366)
Q Consensus 54 ~~I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l------~~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L 121 (366)
..|.|...-+.+|.|||+.|+|.++... .+.... .....|..|..-.+-+|.|.- ++-|+.|+.
T Consensus 103 ~~i~~i~~~~g~lWigt~~Gl~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt---~~Gl~~~~~ 172 (758)
T 3ott_A 103 TDVRTMALQGDTLWLGALNGLYTYQLQS-RKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGT---YNGLCRYIP 172 (758)
T ss_dssp SCEEEEEEETTEEEEEETTEEEEEETTT-CCEEEECHHHHCCSCSCEEEEEECTTCCEEEEE---TTEEEEEET
T ss_pred ceEEEEEecCCcEEEEcCCcceeEeCCC-CeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEe---CCCHhhCcc
Confidence 3455554334569999999999888532 223222 112346666555455555532 345766654
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=36.80 E-value=2.6e+02 Score=25.86 Aligned_cols=235 Identities=9% Similarity=0.077 Sum_probs=104.2
Q ss_pred CceeEEeEEecceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccc
Q psy15182 53 GSEILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILK 130 (366)
Q Consensus 53 ~~~I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~ 130 (366)
...|.|.+.-++.|+.|+.+|...+..-..++....+ ....|..+..- .+ +++..+.|+.|++|++..-...
T Consensus 173 ~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~--- 246 (435)
T 1p22_A 173 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDI--- 246 (435)
T ss_dssp SSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCC---
T ss_pred CCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCc---
Confidence 4678887653445999999986555432222333322 23468888774 34 4445568999999998542210
Q ss_pred cCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-CcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCC
Q psy15182 131 MDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK-DSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGT 209 (366)
Q Consensus 131 ~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k-~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~ 209 (366)
...+. ..+.. ....++.. ++. +|+++-. ..|.++.... . ..++.+..-......+. +.+.
T Consensus 247 ---~~~~~----~~~~~--~~v~~~~~-~~~-~l~s~~~dg~i~vwd~~~--~---~~~~~~~~~~~~v~~~~---~~~~ 307 (435)
T 1p22_A 247 ---TLRRV----LVGHR--AAVNVVDF-DDK-YIVSASGDRTIKVWNTST--C---EFVRTLNGHKRGIACLQ---YRDR 307 (435)
T ss_dssp ---EEEEE----ECCCS--SCEEEEEE-ETT-EEEEEETTSEEEEEETTT--C---CEEEEEECCSSCEEEEE---EETT
T ss_pred ---eeeeE----ecCCC--CcEEEEEe-CCC-EEEEEeCCCeEEEEECCc--C---cEEEEEcCCCCcEEEEE---eCCC
Confidence 00000 00111 11112222 333 4444444 4455544322 1 13334321112222222 2344
Q ss_pred eEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEc-ceEEEEeCCC-c---------ee
Q psy15182 210 RLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYD-NEGVYVNTYG-K---------VS 278 (366)
Q Consensus 210 ~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~-~~~vfVn~~G-~---------~s 278 (366)
.+..|- ......+.|++++.....+.. +. ....++ .. ++.-++.+-. .....-|... . ..
T Consensus 308 ~l~~g~-~dg~i~iwd~~~~~~~~~~~~-h~---~~v~~~-~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 378 (435)
T 1p22_A 308 LVVSGS-SDNTIRLWDIECGACLRVLEG-HE---ELVRCI-RF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL 378 (435)
T ss_dssp EEEEEE-TTSCEEEEETTTCCEEEEECC-CS---SCEEEE-EC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEE
T ss_pred EEEEEe-CCCeEEEEECCCCCEEEEEeC-Cc---CcEEEE-Ee---cCCEEEEEeCCCcEEEEECCCCCCccccccchhe
Confidence 554443 245678999998876554422 21 111122 22 1233333332 2222223211 1 11
Q ss_pred eeeeeeeCCCCcEEEEccCCeEEEEeC-CeEEEEEccCCCEEEEEe
Q psy15182 279 KNILLQWGEMPTSVAYIGTGQIMGWGN-KAIEIRSVETGHLDGVFM 323 (366)
Q Consensus 279 r~~~l~W~~~P~sva~~~~PYil~f~~-~~IEIR~v~tg~Lvq~i~ 323 (366)
... -.-.+...++++ ...+|+.-+. ..|-|.++.++...+...
T Consensus 379 ~~~-~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 422 (435)
T 1p22_A 379 RTL-VEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLNDPAAQAEP 422 (435)
T ss_dssp EEE-CCCSSCCCCEEE-CSSCEEECCSSSEEEEEC-----------
T ss_pred eec-cCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCCCCCcccCC
Confidence 111 112344667788 6777665554 678999998887766543
No 61
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=36.35 E-value=3.4e+02 Score=27.16 Aligned_cols=145 Identities=17% Similarity=0.264 Sum_probs=75.9
Q ss_pred ceEEEeecceeEEEEecCCCceEEeecCC----c--eEEEEEecCCCeEEE--EECCCC----eEEEEEchhhhcccccc
Q psy15182 64 VNLLIGTETGLMLLDRSGQGKVYQLVNRR----R--FQQMEVLEGQNILVT--ISGKRN----RVRVFYLSWLKSKILKM 131 (366)
Q Consensus 64 ~~LllGTeeGlyll~~~~~~~~~~l~~~k----~--v~Ql~Vle~~~lLi~--lsGk~~----~L~v~~L~~L~~~~~~~ 131 (366)
+.|.+=|+..+|-.+..|+..+.++|+|. . |.--.+-++.+-++. |+-.++ .+.+|..+.
T Consensus 117 ~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-------- 188 (494)
T 1bpo_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-------- 188 (494)
T ss_dssp TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--------
T ss_pred CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--------
Confidence 44999999999999987666788999984 2 222233455555553 332222 233332211
Q ss_pred CCcceeeeeeeEeecCCCceEEEEEEEcC----eEEEEEEEC----CcEEEEEecCC--CccccceeeeecccCCCc---
Q psy15182 132 DGQVERRNGWINVGDLQGAVHFRIVKYER----IKFLVIALK----DSIEIYAWAPK--PYHKFMAFKSFGELGYRP--- 198 (366)
Q Consensus 132 ~~~l~k~kg~~~v~~~kgc~~f~v~~~~~----~~~LcvA~k----~~i~iy~w~~~--p~~kF~~~Kef~~lp~~p--- 198 (366)
+.. ..-+- +|-.|+-.+-++ ...+|.|.| .++.+.+.... .-..|.+ |- .++.-+|
T Consensus 189 --~~s------Q~ieG-haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~k-k~-vdv~fppe~~ 257 (494)
T 1bpo_A 189 --KVS------QPIEG-HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK-KA-VDVFFPPEAQ 257 (494)
T ss_dssp --CCE------EEECC-SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCC-EE-EECCCCTTST
T ss_pred --ccc------chhee-eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccc-ee-eeeeCCcccc
Confidence 110 11111 344555433333 368999999 57999987432 1113322 11 1333333
Q ss_pred ----eEEEEeeec-CCeEEEEEecCCce-EEEECCCCce
Q psy15182 199 ----LLVDLTVEE-GTRLKVIYGSADGF-HAVDLDSAMV 231 (366)
Q Consensus 199 ----~~v~l~v~~-~~~l~V~~g~~~gF-~~idl~~~~~ 231 (366)
..++ +.. .+-+.|.-+ .|| |++|++||..
T Consensus 258 ~DFPvamq--vs~kygviyviTK--~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 258 NDFPVAMQ--ISEKHDVVFLITK--YGYIHLYDLETGTC 292 (494)
T ss_dssp TCCEEEEE--EETTTTEEEEEET--TSEEEEEETTTCCE
T ss_pred cCceeEEE--ecccCCEEEEEec--CceEEEEeccccee
Confidence 3333 322 222333323 565 7999998854
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=36.18 E-value=2.5e+02 Score=25.58 Aligned_cols=264 Identities=13% Similarity=0.103 Sum_probs=127.8
Q ss_pred Ee-cceEEEeecce-eEEEEecCCCceEEeec---CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcc
Q psy15182 61 LW-GVNLLIGTETG-LMLLDRSGQGKVYQLVN---RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQV 135 (366)
Q Consensus 61 ~w-g~~LllGTeeG-lyll~~~~~~~~~~l~~---~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l 135 (366)
.| +.+++.|+.+| +++.+.. .++..+.+. ...|+.+...++-++|++- +.++.|++|++..-.. +
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~-~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~-~~dg~i~iwd~~~~~~--------~ 169 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNAD-SGSVSALAETDESTYVASVKWSHDGSFLSVG-LGNGLVDIYDVESQTK--------L 169 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETT-TCCEEEEEECCTTCCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCE--------E
T ss_pred eecCCCEEEEECCCeEEEeeCC-CCcEeEeeecCCCCCEEEEEECCCCCEEEEE-CCCCeEEEEECcCCeE--------E
Confidence 45 44566666655 5666653 233434333 4579999999877766654 4688999999854221 0
Q ss_pred eeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEE
Q psy15182 136 ERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIY 215 (366)
Q Consensus 136 ~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~ 215 (366)
..-.+ ......++.. .+..+++......|.++..... .+ ..+.+..-......+.+. ..+..+.+|
T Consensus 170 ~~~~~-------~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~--~~--~~~~~~~~~~~v~~~~~~-~~~~~l~s~- 235 (401)
T 4aez_A 170 RTMAG-------HQARVGCLSW-NRHVLSSGSRSGAIHHHDVRIA--NH--QIGTLQGHSSEVCGLAWR-SDGLQLASG- 235 (401)
T ss_dssp EEECC-------CSSCEEEEEE-ETTEEEEEETTSEEEEEETTSS--SC--EEEEEECCSSCEEEEEEC-TTSSEEEEE-
T ss_pred EEecC-------CCCceEEEEE-CCCEEEEEcCCCCEEEEecccC--cc--eeeEEcCCCCCeeEEEEc-CCCCEEEEE-
Confidence 00000 0011122222 3333333333344555443311 11 222332112222223221 123334443
Q ss_pred ecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEE----EcceEEEEeC-CCceeeeeeeeeCCCCc
Q psy15182 216 GSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLC----YDNEGVYVNT-YGKVSKNILLQWGEMPT 290 (366)
Q Consensus 216 g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLc----y~~~~vfVn~-~G~~sr~~~l~W~~~P~ 290 (366)
+....-.++|+.++.....+.. + .....++.--++ +..++.+ +|..-.+.|. .|+..+.. .-.+...
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~-~---~~~v~~~~~~p~--~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~--~~~~~v~ 307 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTN-H---NAAVKAVAWCPW--QSNLLATGGGTMDKQIHFWNAATGARVNTV--DAGSQVT 307 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECC-C---SSCCCEEEECTT--STTEEEEECCTTTCEEEEEETTTCCEEEEE--ECSSCEE
T ss_pred eCCCeEEEccCCCCCccEEecC-C---cceEEEEEECCC--CCCEEEEecCCCCCEEEEEECCCCCEEEEE--eCCCcEE
Confidence 2235677999988766544422 1 111223332232 2345544 3555555564 45544433 3345566
Q ss_pred EEEEccC--CeEEEE---eCCeEEEEEccCCCEEEEEecc-CCCceeEEE-EeCCEEEEEeCCCCCeeEEEEEec
Q psy15182 291 SVAYIGT--GQIMGW---GNKAIEIRSVETGHLDGVFMHK-KSQRLKFLC-ERNDKVFFSSAKGGGHCQIYFMTL 358 (366)
Q Consensus 291 sva~~~~--PYil~f---~~~~IEIR~v~tg~Lvq~i~~k-~~~~lr~L~-~~~d~vf~as~~~~~~~~v~~~~~ 358 (366)
++++ .. ++++.- ..+.|.|..+.++.+.+....+ ....+.-++ +..+.+ +++...++.-.+|-+.-
T Consensus 308 ~~~~-s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 308 SLIW-SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRI-LSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEE-CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSE-EEEECTTSEEEEEECCC
T ss_pred EEEE-CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCC
Confidence 7777 33 344433 4799999999999887775321 112233232 222323 33334566777776544
No 63
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=34.86 E-value=2.4e+02 Score=25.01 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=44.8
Q ss_pred ceeEEeEEe--cceEEEeecceeEEE-EecCCCce-EEeec--CCceEEEEEecCCCeEEEEECCCCeEEEEEchhh
Q psy15182 54 SEILCAALW--GVNLLIGTETGLMLL-DRSGQGKV-YQLVN--RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGlyll-~~~~~~~~-~~l~~--~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L 124 (366)
..|.|.+.- |..|+.|+++|...+ |......+ ..+-. ..+|+.|..-++-..|++-+ ++.|++|++...
T Consensus 171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~ 245 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKD 245 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSS
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCC
Confidence 457777644 334778888886555 43322122 23322 45899999998888777766 449999998654
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=34.49 E-value=2.3e+02 Score=24.62 Aligned_cols=138 Identities=8% Similarity=-0.034 Sum_probs=72.0
Q ss_pred eEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEc--ceEEEEeCCCceeeeeeeeeCC
Q psy15182 210 RLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYD--NEGVYVNTYGKVSKNILLQWGE 287 (366)
Q Consensus 210 ~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~--~~~vfVn~~G~~sr~~~l~W~~ 287 (366)
++.|.-.....-.++|+++++....... ...++.+ .+..+ +..++.+-. +.-..+|..+.......+.=..
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~-~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITL-----GYDFVDT-AITSD-CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEEC-----CCCEEEE-EECSS-SCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEc-----cCCcceE-EEcCC-CCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 3333333345667899998877655521 1222233 33322 233444433 2333356544332122233345
Q ss_pred CCcE-EEEccCC--eEEEEeCC----eEEEEEccCCCEEEEEeccCCCceeEEEE--eCCEEEEEeCCCCCeeEEEEEe
Q psy15182 288 MPTS-VAYIGTG--QIMGWGNK----AIEIRSVETGHLDGVFMHKKSQRLKFLCE--RNDKVFFSSAKGGGHCQIYFMT 357 (366)
Q Consensus 288 ~P~s-va~~~~P--Yil~f~~~----~IEIR~v~tg~Lvq~i~~k~~~~lr~L~~--~~d~vf~as~~~~~~~~v~~~~ 357 (366)
.|.. +++ +.. ++++-..+ .|.+..+.+|+.++.+.+.. ...-++- .+..+|+++...+..-.+|-+.
T Consensus 84 ~~~~~~~~-s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 84 SSMADVDI-TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY--DAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp SCCCCEEE-CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT--TEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCccceEE-CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC--CccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 6777 887 443 66644445 79999999999999987432 2343333 2224666664433324555443
No 65
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=33.63 E-value=1.2e+02 Score=26.65 Aligned_cols=57 Identities=19% Similarity=0.133 Sum_probs=38.8
Q ss_pred eEEEeecceeEEEEecCCCceEEeec-CCceEEEEEecCCCeEEEEECCCCeEEEEEchhh
Q psy15182 65 NLLIGTETGLMLLDRSGQGKVYQLVN-RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 65 ~LllGTeeGlyll~~~~~~~~~~l~~-~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L 124 (366)
.|+++ +.-+++++.. .++..+.+. ...+..+.+-++-+.|++ ++.++.|++|++...
T Consensus 269 ~l~~~-~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 269 QIYGV-LNRLAKYDLK-QRKLIKAANLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEEE-ESEEEEEETT-TTEEEEEEECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTT
T ss_pred EEEEE-cCeEEEEECc-cCeEEEEEcCCCCccceEECCCCCEEEE-ecCCCeEEEEecccc
Confidence 36666 7778888864 233434333 235788888888777666 678899999998654
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=33.00 E-value=2.7e+02 Score=24.96 Aligned_cols=73 Identities=8% Similarity=0.066 Sum_probs=46.1
Q ss_pred CceeEEeEEe--cceEEEeecceeEEEE-ecC----CCceEEeec-CCceEEEEEecCCCeEEEEECCCCeEEEEEchhh
Q psy15182 53 GSEILCAALW--GVNLLIGTETGLMLLD-RSG----QGKVYQLVN-RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeGlyll~-~~~----~~~~~~l~~-~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L 124 (366)
+..|.|.+.- |..|+.|+++|...+. ... ...+..+.. ...|..|...++.+-+++..+.|+.|++|++..-
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 4567777533 3348889888765554 332 112333332 3479999999873334444568999999998654
Q ss_pred h
Q psy15182 125 K 125 (366)
Q Consensus 125 ~ 125 (366)
.
T Consensus 147 ~ 147 (416)
T 2pm9_A 147 T 147 (416)
T ss_dssp S
T ss_pred c
Confidence 3
No 67
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=37.42 E-value=10 Score=22.00 Aligned_cols=17 Identities=41% Similarity=0.645 Sum_probs=13.6
Q ss_pred CceEEEEEcceEEEEeC
Q psy15182 257 GMQLLLCYDNEGVYVNT 273 (366)
Q Consensus 257 ~~E~LLcy~~~~vfVn~ 273 (366)
++--|||||..|--||.
T Consensus 6 edctllcydtigtcvdg 22 (27)
T 2lix_A 6 EDCTLLCYDTIGTCVDG 22 (27)
Confidence 35679999999988874
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=31.08 E-value=2.6e+02 Score=25.42 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=0.0
Q ss_pred CceeEEeEEe--c-ceEEEeecceeEEEEecCCCce----EEeecCC--------------ceEEEEEecCCCeEEEEEC
Q psy15182 53 GSEILCAALW--G-VNLLIGTETGLMLLDRSGQGKV----YQLVNRR--------------RFQQMEVLEGQNILVTISG 111 (366)
Q Consensus 53 ~~~I~Caa~w--g-~~LllGTeeGlyll~~~~~~~~----~~l~~~k--------------~v~Ql~Vle~~~lLi~lsG 111 (366)
...|.|.+.- | ..|+.|+.+|...+..-...+. .+.+... .|..+..-++-++|++-+.
T Consensus 226 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 226 TEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred CcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Q ss_pred CCCeEEEEEch
Q psy15182 112 KRNRVRVFYLS 122 (366)
Q Consensus 112 k~~~L~v~~L~ 122 (366)
+.|++|++.
T Consensus 306 --~~v~iwd~~ 314 (447)
T 3dw8_B 306 --LSVKVWDLN 314 (447)
T ss_dssp --SEEEEEETT
T ss_pred --CeEEEEeCC
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=30.35 E-value=3.3e+02 Score=25.18 Aligned_cols=72 Identities=10% Similarity=0.042 Sum_probs=45.8
Q ss_pred cCCceeEEeEEe--cce-EEEeecceeEEEE-ec-CCCc-eEEee-cCCceEEEEEecCCCeEEEEECCCCeEEEEEch
Q psy15182 51 KFGSEILCAALW--GVN-LLIGTETGLMLLD-RS-GQGK-VYQLV-NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 51 ~f~~~I~Caa~w--g~~-LllGTeeGlyll~-~~-~~~~-~~~l~-~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~ 122 (366)
.+...|.|.+-- +.+ |+.|.++|.-.+- .. ++.. ..+.. ....|+.|..-+..+-+|+-++.|+.|++|++.
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 345679998632 344 8899999965554 32 2221 22222 345899999987544344445689999999974
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=30.07 E-value=2.2e+02 Score=25.39 Aligned_cols=71 Identities=7% Similarity=0.015 Sum_probs=45.1
Q ss_pred CCceeEEeEEe--cceEEEeecceeEEE-EecCCCc---eEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEEEchh
Q psy15182 52 FGSEILCAALW--GVNLLIGTETGLMLL-DRSGQGK---VYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVFYLSW 123 (366)
Q Consensus 52 f~~~I~Caa~w--g~~LllGTeeGlyll-~~~~~~~---~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~ 123 (366)
....|.|.+.- |+.|+.|+++|...+ +...... ...+. ....|..+...++.++|++- +.|+.|++|++..
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG-CADRKAYVLSAYV 177 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE-ESSSCEEEEEECC
T ss_pred cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE-eCCCEEEEEEEEe
Confidence 34677777643 345999999886554 4322111 22333 24479999999877766654 5789999999853
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=29.49 E-value=3.2e+02 Score=24.74 Aligned_cols=205 Identities=10% Similarity=0.009 Sum_probs=98.0
Q ss_pred CCceEEEEEec-CCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcC-eEEEEEEE
Q psy15182 91 RRRFQQMEVLE-GQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYER-IKFLVIAL 168 (366)
Q Consensus 91 ~k~v~Ql~Vle-~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~-~~~LcvA~ 168 (366)
...|..|..-+ +.++|++ .+.|+.|++|++..-.... .....+..-.+ .. ....++..... ..+|+.+-
T Consensus 81 ~~~V~~~~~~p~~~~~l~s-~s~dg~v~vw~~~~~~~~~-~~~~~~~~~~~-----h~--~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIAS-GSEDCTVMVWEIPDGGLVL-PLREPVITLEG-----HT--KRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp SSCEEEEEECTTCTTEEEE-EETTSEEEEEECCTTCCSS-CBCSCSEEEEC-----CS--SCEEEEEECSSBTTEEEEEE
T ss_pred CCCEEEEEeCCCCCCEEEE-EeCCCeEEEEEccCCCCcc-ccCCceEEecC-----CC--CeEEEEEECcCCCCEEEEEc
Confidence 35799999998 5565554 4589999999986532100 00000000000 01 11122222222 23444444
Q ss_pred C-CcEEEEEecCCCccccceeeee--cccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCc
Q psy15182 169 K-DSIEIYAWAPKPYHKFMAFKSF--GELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPIC 245 (366)
Q Consensus 169 k-~~i~iy~w~~~p~~kF~~~Kef--~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~ 245 (366)
. ..|.++..... ...+.+ ...+.....+.+. ..+..+..|-. ...-.++|++++.....+...+. ...
T Consensus 152 ~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~--~~~ 222 (402)
T 2aq5_A 152 CDNVILVWDVGTG-----AAVLTLGPDVHPDTIYSVDWS-RDGALICTSCR-DKRVRVIEPRKGTVVAEKDRPHE--GTR 222 (402)
T ss_dssp TTSCEEEEETTTT-----EEEEEECTTTCCSCEEEEEEC-TTSSCEEEEET-TSEEEEEETTTTEEEEEEECSSC--SSS
T ss_pred CCCEEEEEECCCC-----CccEEEecCCCCCceEEEEEC-CCCCEEEEEec-CCcEEEEeCCCCceeeeeccCCC--CCc
Confidence 3 44555443221 123333 1112222233321 13344544332 34577999998876544422221 222
Q ss_pred ceEEEEecCCCCceEEEE-E----cceEEEEeCCCce--eeeeeeeeCCCCcEEEEccCC--eEEEE--eCCeEEEEEcc
Q psy15182 246 PHCIVALPNSNGMQLLLC-Y----DNEGVYVNTYGKV--SKNILLQWGEMPTSVAYIGTG--QIMGW--GNKAIEIRSVE 314 (366)
Q Consensus 246 p~~I~~l~~~~~~E~LLc-y----~~~~vfVn~~G~~--sr~~~l~W~~~P~sva~~~~P--Yil~f--~~~~IEIR~v~ 314 (366)
+..+.-.++ +.+|.+ | |....+.|..... .....+.-...+.+++| +.. +++.- ....|.|..+.
T Consensus 223 ~~~~~~~~~---~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 223 PVHAVFVSE---GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF-DPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp CCEEEECST---TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE-ETTTTEEEEEETTCSCEEEEEEC
T ss_pred ceEEEEcCC---CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE-cCCCCEEEEEEcCCCeEEEEEec
Confidence 344443333 355554 2 3334444554322 23334445556777777 443 45433 36789999999
Q ss_pred CCC
Q psy15182 315 TGH 317 (366)
Q Consensus 315 tg~ 317 (366)
+++
T Consensus 299 ~~~ 301 (402)
T 2aq5_A 299 SEA 301 (402)
T ss_dssp SST
T ss_pred CCC
Confidence 998
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=29.01 E-value=2.9e+02 Score=24.12 Aligned_cols=71 Identities=8% Similarity=0.071 Sum_probs=44.8
Q ss_pred CceeEEeEEe----cceEEEeeccee-EEEEecCCC-ceEEee--cCCceEEEEEecC--CCeEEEEECCCCeEEEEEch
Q psy15182 53 GSEILCAALW----GVNLLIGTETGL-MLLDRSGQG-KVYQLV--NRRRFQQMEVLEG--QNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 53 ~~~I~Caa~w----g~~LllGTeeGl-yll~~~~~~-~~~~l~--~~k~v~Ql~Vle~--~~lLi~lsGk~~~L~v~~L~ 122 (366)
...|.|.+.- ++.|+.|.++|. .+.+..... .....+ ....|..+...++ -++|+ ..+.|+.|++|++.
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~v~d~~ 133 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFK 133 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECC
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEE-EecCCCcEEEEecC
Confidence 4567777642 344888988885 444543221 122222 2347999999987 45544 44689999999986
Q ss_pred hh
Q psy15182 123 WL 124 (366)
Q Consensus 123 ~L 124 (366)
..
T Consensus 134 ~~ 135 (379)
T 3jrp_A 134 EN 135 (379)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 73
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.00 E-value=3.9e+02 Score=25.63 Aligned_cols=148 Identities=16% Similarity=0.211 Sum_probs=76.2
Q ss_pred ceEEEeecceeEEEEecCCCceEEeecCC----ceEEEEE--ecCCCeEEE--EECCCC----eEEEEEchhhhcccccc
Q psy15182 64 VNLLIGTETGLMLLDRSGQGKVYQLVNRR----RFQQMEV--LEGQNILVT--ISGKRN----RVRVFYLSWLKSKILKM 131 (366)
Q Consensus 64 ~~LllGTeeGlyll~~~~~~~~~~l~~~k----~v~Ql~V--le~~~lLi~--lsGk~~----~L~v~~L~~L~~~~~~~ 131 (366)
+.|.+=|+..+|-.+..++..+.++|+|. ..+-|.. -++.+-+++ |+-.++ .+.+|..+.
T Consensus 118 ~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-------- 189 (365)
T 2xzh_A 118 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-------- 189 (365)
T ss_dssp SEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--------
T ss_pred CeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--------
Confidence 34999999999999987766788999984 3333333 355555443 322222 233332211
Q ss_pred CCcceeeeeeeEeecCCCceEEEEEEEc----CeEEEEEEEC----CcEEEEEecCC--Cccccce-eeeecc----cCC
Q psy15182 132 DGQVERRNGWINVGDLQGAVHFRIVKYE----RIKFLVIALK----DSIEIYAWAPK--PYHKFMA-FKSFGE----LGY 196 (366)
Q Consensus 132 ~~~l~k~kg~~~v~~~kgc~~f~v~~~~----~~~~LcvA~k----~~i~iy~w~~~--p~~kF~~-~Kef~~----lp~ 196 (366)
+.. ..-+- +|-.|+-.+-+ ....+|.|.| .++.+.+.... .-..|.+ --|+.- ..+
T Consensus 190 --~~s------Q~ieG-haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~D 260 (365)
T 2xzh_A 190 --KVS------QPIEG-HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 260 (365)
T ss_dssp --TEE------EEECC-SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTC
T ss_pred --ccc------ceeee-eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCC
Confidence 110 11111 34445433322 3468999999 57899987422 1123322 223210 122
Q ss_pred CceEEEEeeec-CCeEEEEEecCCce-EEEECCCCceE
Q psy15182 197 RPLLVDLTVEE-GTRLKVIYGSADGF-HAVDLDSAMVY 232 (366)
Q Consensus 197 ~p~~v~l~v~~-~~~l~V~~g~~~gF-~~idl~~~~~~ 232 (366)
=|..++ +.. .+-+.|.-+ .|| |++|++||...
T Consensus 261 FPVamq--vs~kygviyviTK--~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 261 FPVAMQ--ISEKHDVVFLITK--YGYIHLYDLETGTCI 294 (365)
T ss_dssp CEEEEE--EETTTTEEEEEET--TSEEEEEETTTCCEE
T ss_pred ceEEEE--ecccCCEEEEEeC--CcEEEEEEcccCcEE
Confidence 233433 322 222333323 555 68999988653
No 74
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=26.97 E-value=3.1e+02 Score=23.74 Aligned_cols=224 Identities=11% Similarity=0.105 Sum_probs=106.7
Q ss_pred CCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCc
Q psy15182 103 QNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPY 182 (366)
Q Consensus 103 ~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~ 182 (366)
-+.+++..+.++.|++|++..-+. .++ +.. .+... .+......++|.++-...=.++.|....
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~---------~~~---~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~- 71 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEI---------LNQ---ITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL- 71 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCE---------EEE---EEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-
T ss_pred CCEEEEEecCCCeEEEEeCcccce---------eee---EEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-
Confidence 455555566778999998754221 010 001 01111 2322222345555555433555565432
Q ss_pred cccceeeeecccCCCceE-EEEeeecCCeEEEEEecCC--ceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCce
Q psy15182 183 HKFMAFKSFGELGYRPLL-VDLTVEEGTRLKVIYGSAD--GFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQ 259 (366)
Q Consensus 183 ~kF~~~Kef~~lp~~p~~-v~l~v~~~~~l~V~~g~~~--gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E 259 (366)
.+. ..+.+ .....|.. +.+. ..+..+.+..+... ...++|++++.....+.. ...|+.+..-++ +..
T Consensus 72 ~~~-~~~~~-~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~spd--g~~ 141 (331)
T 3u4y_A 72 EPP-KVVAI-QEGQSSMADVDIT-PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISPN--GNG 141 (331)
T ss_dssp SSC-EEEEE-EECSSCCCCEEEC-TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECTT--SSC
T ss_pred Cce-eEEec-ccCCCCccceEEC-CCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECCC--CCE
Confidence 121 12233 23344443 4322 23444554333111 688999998877655421 223444433232 223
Q ss_pred EEEE-Ec--c-eEEE-EeCCCceee--eeeeeeCCCCcEEEEccCC--eEEEE--eCCeEEEEEccCCCE---EEEEecc
Q psy15182 260 LLLC-YD--N-EGVY-VNTYGKVSK--NILLQWGEMPTSVAYIGTG--QIMGW--GNKAIEIRSVETGHL---DGVFMHK 325 (366)
Q Consensus 260 ~LLc-y~--~-~~vf-Vn~~G~~sr--~~~l~W~~~P~sva~~~~P--Yil~f--~~~~IEIR~v~tg~L---vq~i~~k 325 (366)
++++ .+ . ..+| ++..|.... ...+.=...|.++++ +.. ++++- ..+.|.+..+.+|++ ++.+...
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITF-TPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEE-CTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEE-CCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC
Confidence 4443 32 2 3343 444454321 112222455788887 433 44443 357899999999999 8888743
Q ss_pred CCCceeEEEE-eCCEEEEEeCCCCCeeEEEEEec
Q psy15182 326 KSQRLKFLCE-RNDKVFFSSAKGGGHCQIYFMTL 358 (366)
Q Consensus 326 ~~~~lr~L~~-~~d~vf~as~~~~~~~~v~~~~~ 358 (366)
..+ ..+..+ .+..+|+++. +...|+...+
T Consensus 221 ~~~-~~~~~spdg~~l~v~~~---~~~~i~~~d~ 250 (331)
T 3u4y_A 221 NLP-GTIVVSRDGSTVYVLTE---STVDVFNFNQ 250 (331)
T ss_dssp SCC-CCEEECTTSSEEEEECS---SEEEEEEEET
T ss_pred CCC-ceEEECCCCCEEEEEEc---CCCEEEEEEC
Confidence 221 122233 3344666653 2334665554
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=25.67 E-value=3.6e+02 Score=24.03 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=47.1
Q ss_pred ecCCceeEEeEEe--c-ceEEEeecceeEEE-EecCCCceEEee----cCCceEEEEEecCCCeEEEEECCCCeEEEEEc
Q psy15182 50 KKFGSEILCAALW--G-VNLLIGTETGLMLL-DRSGQGKVYQLV----NRRRFQQMEVLEGQNILVTISGKRNRVRVFYL 121 (366)
Q Consensus 50 k~f~~~I~Caa~w--g-~~LllGTeeGlyll-~~~~~~~~~~l~----~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L 121 (366)
...+..|.|.+.- | +.|+.|..+|...+ +... .+....+ ....|..+...+..+-+++..+.|+.|++|++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV-QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS-TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC-cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 3445788888644 3 34999998886555 4432 2222332 34589999999844444444568999999998
Q ss_pred hh
Q psy15182 122 SW 123 (366)
Q Consensus 122 ~~ 123 (366)
..
T Consensus 149 ~~ 150 (383)
T 3ei3_B 149 SG 150 (383)
T ss_dssp TS
T ss_pred CC
Confidence 63
No 76
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=25.61 E-value=92 Score=27.35 Aligned_cols=18 Identities=6% Similarity=0.104 Sum_probs=9.6
Q ss_pred cceEEEeec-ceeEEEEec
Q psy15182 63 GVNLLIGTE-TGLMLLDRS 80 (366)
Q Consensus 63 g~~LllGTe-eGlyll~~~ 80 (366)
+.+|++||. .|++.++.+
T Consensus 225 ~g~l~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 225 DGTIYVTSLDGHLYAINPD 243 (330)
T ss_dssp TSCEEEEETTTEEEEECTT
T ss_pred CCeEEEEcCCCeEEEECCC
Confidence 445555553 555555543
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=25.11 E-value=3.4e+02 Score=23.54 Aligned_cols=69 Identities=10% Similarity=0.093 Sum_probs=42.2
Q ss_pred ceeEEeEEe--cceEEEeecceeEE-EEecC-CCce-EEee-cCCceEEEEEecC-CCeEEEEECCCCeEEEEEch
Q psy15182 54 SEILCAALW--GVNLLIGTETGLML-LDRSG-QGKV-YQLV-NRRRFQQMEVLEG-QNILVTISGKRNRVRVFYLS 122 (366)
Q Consensus 54 ~~I~Caa~w--g~~LllGTeeGlyl-l~~~~-~~~~-~~l~-~~k~v~Ql~Vle~-~~lLi~lsGk~~~L~v~~L~ 122 (366)
..|.|.+.= |+.|+-|..+|.-. .+..+ ..+. ..+- ...+|..+...+. .+-+|+-.+.|+.+++|++.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 456666531 55699999888544 45432 2222 2222 2347999988653 34344445689999999985
No 78
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.63 E-value=8.3e+02 Score=26.85 Aligned_cols=214 Identities=15% Similarity=0.160 Sum_probs=105.0
Q ss_pred ceeEEeEEecceEEEeecceeEEEEecCCCceEEeec---CCceEEEEEecC------CCeEEEEECCCCeEEEEEchhh
Q psy15182 54 SEILCAALWGVNLLIGTETGLMLLDRSGQGKVYQLVN---RRRFQQMEVLEG------QNILVTISGKRNRVRVFYLSWL 124 (366)
Q Consensus 54 ~~I~Caa~wg~~LllGTeeGlyll~~~~~~~~~~l~~---~k~v~Ql~Vle~------~~lLi~lsGk~~~L~v~~L~~L 124 (366)
..|.+|+.-+..+++++..-+++++.+. +.+..+.. ...|.=+++-+. -+.+++-.-+|+.++++.|..|
T Consensus 514 ~~I~~As~n~~~vvva~g~~l~~fel~~-~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 514 KNISVASCNSSQVVVAVGRALYYLQIHP-QELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCCEEEECSSEEEEEETTEEEEEEEET-TEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEEeCCCEEEEEECCEEEEEEeeC-CceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 4688888767778888755566666542 22221111 124666665432 2455554546899999999876
Q ss_pred hccccccC--CcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEE-EecCCCccccceeeeecccCCCceEE
Q psy15182 125 KSKILKMD--GQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIY-AWAPKPYHKFMAFKSFGELGYRPLLV 201 (366)
Q Consensus 125 ~~~~~~~~--~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy-~w~~~p~~kF~~~Kef~~lp~~p~~v 201 (366)
+.-....- ...++. ..+...++..+|.+++.+.+.++ .+.+.. .++...|.. .+...|..+
T Consensus 593 ~~~~~~~L~~~~~p~s--------------i~l~~~~~~~~L~igl~dG~l~~~~~d~~t-g~l~d~r~~-~LG~~pv~L 656 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRS--------------ILMTTFESSHYLLCALGDGALFYFGLNIET-GLLSDRKKV-TLGTQPTVL 656 (1158)
T ss_dssp CEEEEEECCSSCCEEE--------------EEEEEETTEEEEEEEETTSEEEEEEECTTT-CCEEEEEEE-ECCSSCCEE
T ss_pred CeEEEEECCCCCCCcE--------------EEEEEeCCCcEEEEEeCCCeEEEEEEcCCC-CccccceeE-EcCCCceEE
Confidence 53211110 011111 12233356789999999987754 454321 233333332 244445322
Q ss_pred E-Eee-------ecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcceEEEEeC
Q psy15182 202 D-LTV-------EEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNEGVYVNT 273 (366)
Q Consensus 202 ~-l~v-------~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~~vfVn~ 273 (366)
. +.. ..+++..++|.+.+.|.+-.+.-......- |-+. ...|.+++-+.+ +++-+|- .-+.
T Consensus 657 ~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~-~F~s--e~~~~g~v~~~~---~~LrI~~-----i~~~ 725 (1158)
T 3ei3_A 657 RTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMC-PLNS--DGYPDSLALANN---STLTIGT-----IDEI 725 (1158)
T ss_dssp EEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEE-EECC--SSSTTEEEEECS---SCEEEEE-----ECCS
T ss_pred EEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEe-ccCc--ccCCCcEEEEcC---CceEEEE-----eccc
Confidence 1 111 134455566766666665555422111111 1011 113444443332 2333332 1122
Q ss_pred CCceeeeeeeeeCCCCcEEEEccCC
Q psy15182 274 YGKVSKNILLQWGEMPTSVAYIGTG 298 (366)
Q Consensus 274 ~G~~sr~~~l~W~~~P~sva~~~~P 298 (366)
+.+..+...+ ...|..+|| +.+
T Consensus 726 ~~~~~~~ipL--~~Tprri~y-~~~ 747 (1158)
T 3ei3_A 726 QKLHIRTVPL--YESPRKICY-QEV 747 (1158)
T ss_dssp SSEEEEEEEC--SSEEEEEEE-EGG
T ss_pred CCeeEEEEeC--CCCceEEEE-cCC
Confidence 3344455555 468999999 553
No 79
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=21.49 E-value=6.5e+02 Score=25.58 Aligned_cols=239 Identities=13% Similarity=0.122 Sum_probs=113.4
Q ss_pred ceeEEeEEec-ceEEEeecc-eeEEEEecCCCceEEe----------ecCCceEEEEEecCCC-eEEEEECCCCeEEEEE
Q psy15182 54 SEILCAALWG-VNLLIGTET-GLMLLDRSGQGKVYQL----------VNRRRFQQMEVLEGQN-ILVTISGKRNRVRVFY 120 (366)
Q Consensus 54 ~~I~Caa~wg-~~LllGTee-Glyll~~~~~~~~~~l----------~~~k~v~Ql~Vle~~~-lLi~lsGk~~~L~v~~ 120 (366)
..|.|...=. .+|.|||+. ||+.++... ...... ++...|..|..-.+-+ |.+.- .++.|+.++
T Consensus 357 ~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~-~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt--~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTNDGGLNLYNPIT-QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT--HAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTSCEEEEESSSCEEEECTTT-CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE--TTTEEEEEE
T ss_pred CeeEEEEECCCCCEEEEECCCCeEEEcCCC-CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe--CcCceeEEe
Confidence 3466665432 349999986 999998642 222222 1223577777665556 55544 245788887
Q ss_pred chhhhcccc-ccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEECCcEEEEEecCCCccccceeeee---cccCC
Q psy15182 121 LSWLKSKIL-KMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALKDSIEIYAWAPKPYHKFMAFKSF---GELGY 196 (366)
Q Consensus 121 L~~L~~~~~-~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k~~i~iy~w~~~p~~kF~~~Kef---~~lp~ 196 (366)
...=.-... ...+. ..+-..+++.... .-.|.++....+..|....+ +|..+... ..++.
T Consensus 434 ~~~~~~~~~~~~~~~------------l~~~~v~~i~~d~-~g~lwigt~~Gl~~~~~~~~---~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQ------------LVNENVYAILPDG-EGNLWLGTLSALVRFNPEQR---SFTTIEKEKDGTPVVS 497 (795)
T ss_dssp TTTCCEEEECTTTSC------------CSCSCEEEEEECS-SSCEEEEESSCEEEEETTTT---EEEECCBCTTCCBCCC
T ss_pred CCCCcEEEeecCCCC------------cCCCeeEEEEECC-CCCEEEEecCceeEEeCCCC---eEEEccccccccccCC
Confidence 542110000 00000 1111223333321 12355566666665543322 23222110 01111
Q ss_pred CceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEEEEecCCCCceEEEEEcceEEE-EeCCC
Q psy15182 197 RPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCIVALPNSNGMQLLLCYDNEGVY-VNTYG 275 (366)
Q Consensus 197 ~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I~~l~~~~~~E~LLcy~~~~vf-Vn~~G 275 (366)
.. ...+.....+++-||-. .|...+|.+++.. . +.+...........|..+.++.++.+.++-+. |++ .|...
T Consensus 498 ~~-i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~ 571 (795)
T 4a2l_A 498 KQ-ITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKD 571 (795)
T ss_dssp CC-EEEEEECTTCCEEEEES--SCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTT
T ss_pred ce-EEEEEECCCCCEEEEeC--CceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCC
Confidence 11 12233334567778654 8999999887655 3 22110111122223444433445678888776 666 45544
Q ss_pred ceeeeeeeeeCCCCc----EEEEccCCeEEEEeCCeEEEEEccCCCE
Q psy15182 276 KVSKNILLQWGEMPT----SVAYIGTGQIMGWGNKAIEIRSVETGHL 318 (366)
Q Consensus 276 ~~sr~~~l~W~~~P~----sva~~~~PYil~f~~~~IEIR~v~tg~L 318 (366)
...+.+... ++.|. +++.-....|..-+.+.|-..+..++.+
T Consensus 572 ~~~~~~~~~-~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 572 KQIKRYNTT-NGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKF 617 (795)
T ss_dssp TEEEEECGG-GTCSCSCEEEEEECTTSCEEEEETTEEEEEETTTTEE
T ss_pred CcEEEeCCC-CCCchhheEEEEECCCCCEEEEcCCceEEEcCCCCcE
Confidence 433332211 22333 3333113456666677777777666654
No 80
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=21.19 E-value=4.5e+02 Score=23.60 Aligned_cols=239 Identities=10% Similarity=0.047 Sum_probs=106.6
Q ss_pred CCceEEEEEecCCCeEEEEECCCCeEEEEEchhhhccccccCCcceeeeeeeEeecCCCceEEEEEEEcCeEEEEEEEC-
Q psy15182 91 RRRFQQMEVLEGQNILVTISGKRNRVRVFYLSWLKSKILKMDGQVERRNGWINVGDLQGAVHFRIVKYERIKFLVIALK- 169 (366)
Q Consensus 91 ~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~~L~~L~~~~~~~~~~l~k~kg~~~v~~~kgc~~f~v~~~~~~~~LcvA~k- 169 (366)
...|..+...++..+|. ++.++.|++|++..=+... ..+... .+ . .....++.......+|+.+-.
T Consensus 94 ~~~V~~~~~s~d~~~l~--~s~dg~v~lWd~~~~~~~~---~~~~~~-~~-----h--~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 94 EAGVTDVAWVSEKGILV--ASDSGAVELWEILEKESLL---VNKFAK-YE-----H--DDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp SSCEEEEEEETTTEEEE--EETTSCEEEC--------C---CCCEEE-CC-----C--SSCEEEEEECSSSSEEEEEETT
T ss_pred CCCEEEEEEcCCCCEEE--EECCCEEEEeeccccceeE---EEeecc-CC-----C--CCCEEEEEECCCCCEEEEEeCC
Confidence 34699999998765543 4568899999875422100 000000 00 0 011222333223344554444
Q ss_pred CcEEEEEecCCCccccceeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeecCCCCCCCCcceEE
Q psy15182 170 DSIEIYAWAPKPYHKFMAFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYLPKHIQGPICPHCI 249 (366)
Q Consensus 170 ~~i~iy~w~~~p~~kF~~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~p~~~~~~~~p~~I 249 (366)
..|.++..... ..+..+..-......+.+. ..++.+.+..+......+.|+++++....+.... ....+.++
T Consensus 161 g~v~iwd~~~~-----~~~~~~~~h~~~v~~v~~s-~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~--~~~~v~~v 232 (357)
T 4g56_B 161 FSVKVWDLSQK-----AVLKSYNAHSSEVNCVAAC-PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA--SDTIPTSV 232 (357)
T ss_dssp SCEEEEETTTT-----EEEEEECCCSSCEEEEEEC-TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT--CCSCEEEE
T ss_pred CeEEEEECCCC-----cEEEEEcCCCCCEEEEEEc-cCCCceeeeeccCCceEEEECCCCceeeeeeecc--ccccccch
Confidence 45666544321 1233332111112222221 1233333332323456778888775543331111 11222333
Q ss_pred EEecCCCCceEEE-EEc-ceEEEEeC-CCceeeeeeeeeCCCCcEEEEccC---CeEEEEe-CCeEEEEEccCCCEEEEE
Q psy15182 250 VALPNSNGMQLLL-CYD-NEGVYVNT-YGKVSKNILLQWGEMPTSVAYIGT---GQIMGWG-NKAIEIRSVETGHLDGVF 322 (366)
Q Consensus 250 ~~l~~~~~~E~LL-cy~-~~~vfVn~-~G~~sr~~~l~W~~~P~sva~~~~---PYil~f~-~~~IEIR~v~tg~Lvq~i 322 (366)
..-++ +..+|. +-+ ..-...|. .|+..+..... .....+++| .. .||..-. ...|.|.++++|++++.+
T Consensus 233 ~~sp~--~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~-~~~v~~l~~-sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 233 TWHPE--KDDTFACGDETGNVSLVNIKNPDSAQTSAVH-SQNITGLAY-SYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EECTT--STTEEEEEESSSCEEEEESSCGGGCEEECCC-SSCEEEEEE-CSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred hhhhc--ccceEEEeecccceeEEECCCCcEeEEEecc-ceeEEEEEE-cCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 32232 234444 333 33333454 33333333222 223456677 43 3454333 478999999999999988
Q ss_pred eccCCCceeEEEEe--CCEEEEEeCCCCCeeEEEEEe
Q psy15182 323 MHKKSQRLKFLCER--NDKVFFSSAKGGGHCQIYFMT 357 (366)
Q Consensus 323 ~~k~~~~lr~L~~~--~d~vf~as~~~~~~~~v~~~~ 357 (366)
.|+. .++=++=. .+.+ +++.-.++.-.+|-+.
T Consensus 309 ~H~~--~V~~vafsP~d~~~-l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 309 SHRD--FVTGVAWSPLDHSK-FTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CCSS--CEEEEEECSSSTTE-EEEEETTSCEEEEECC
T ss_pred CCCC--CEEEEEEeCCCCCE-EEEEcCCCeEEEEECC
Confidence 8753 34434321 2223 3333356667777653
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=21.08 E-value=4e+02 Score=22.98 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=47.0
Q ss_pred CceeEEeEEe--cceEEEeecce-eEEEEecCCCceEEeecCCceEEEEEecCCCeEEEEECCC-----CeEEEEEchhh
Q psy15182 53 GSEILCAALW--GVNLLIGTETG-LMLLDRSGQGKVYQLVNRRRFQQMEVLEGQNILVTISGKR-----NRVRVFYLSWL 124 (366)
Q Consensus 53 ~~~I~Caa~w--g~~LllGTeeG-lyll~~~~~~~~~~l~~~k~v~Ql~Vle~~~lLi~lsGk~-----~~L~v~~L~~L 124 (366)
...|.|.+.- |+.|+.|..+| +.+.+......+..+-...+|..+...++.+.+++.+ .+ +.|++|++..-
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAIL-DNVMKNPGSINIYEIERD 152 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEE-CCBTTBCCEEEEEEEEEC
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEec-CCccCCCCEEEEEEecCC
Confidence 4667777643 34588888888 5555643222222333445899999999888777764 34 89999998653
No 82
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=20.92 E-value=4.4e+02 Score=23.41 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=86.6
Q ss_pred eeeeecccCCCceEEEEeeecCCeEEEEEecCCceEEEECCCCceEEeec-CCCCCCCCcceEEEEecCCCCceEEEE--
Q psy15182 187 AFKSFGELGYRPLLVDLTVEEGTRLKVIYGSADGFHAVDLDSAMVYDIYL-PKHIQGPICPHCIVALPNSNGMQLLLC-- 263 (366)
Q Consensus 187 ~~Kef~~lp~~p~~v~l~v~~~~~l~V~~g~~~gF~~idl~~~~~~~L~~-p~~~~~~~~p~~I~~l~~~~~~E~LLc-- 263 (366)
.++.+. ....|..+. +..++++-|.-.-...-..+|++++....-+. +........|..+.. . ++.+.++
T Consensus 76 ~~~~i~-~~~~p~~i~--~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~---~~~lyv~~~ 148 (328)
T 3dsm_A 76 EVGRIT-GFTSPRYIH--FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y---GKYVYVNCW 148 (328)
T ss_dssp EEEEEE-CCSSEEEEE--EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E---TTEEEEEEC
T ss_pred EEEEcC-CCCCCcEEE--EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E---CCEEEEEcC
Confidence 344553 334455443 22345766654224678899999887654331 110001114455443 2 2455555
Q ss_pred -EcceEEEEeCC-CceeeeeeeeeCCCCcEEEEccC-CeEEEEeC------------CeEEEEEccCCCEEEEEeccCCC
Q psy15182 264 -YDNEGVYVNTY-GKVSKNILLQWGEMPTSVAYIGT-GQIMGWGN------------KAIEIRSVETGHLDGVFMHKKSQ 328 (366)
Q Consensus 264 -y~~~~vfVn~~-G~~sr~~~l~W~~~P~sva~~~~-PYil~f~~------------~~IEIR~v~tg~Lvq~i~~k~~~ 328 (366)
+++.-..+|.. |+..+.... ...|..+++ .. ..+..-.. +.|-+.+..++++++++......
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~-~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~ 225 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTI--GIQPTSLVM-DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD 225 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEEC--SSCBCCCEE-CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC
T ss_pred CCCCEEEEEECCCCeEEEEEEc--CCCccceEE-cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC
Confidence 34545556755 555554443 567889888 43 33433332 57888888999999888732223
Q ss_pred ceeEEEEe--CCEEEEEeCCCCCeeEEEEEec
Q psy15182 329 RLKFLCER--NDKVFFSSAKGGGHCQIYFMTL 358 (366)
Q Consensus 329 ~lr~L~~~--~d~vf~as~~~~~~~~v~~~~~ 358 (366)
..+-|+-. ++.+|+++. .||.+..
T Consensus 226 ~p~~la~~~d~~~lyv~~~------~v~~~d~ 251 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN------DIWRMPV 251 (328)
T ss_dssp CCEEEEECTTSCEEEEESS------SEEEEET
T ss_pred CceeEEEecCCCEEEEEcc------EEEEEEC
Confidence 45656553 566888762 6777665
No 83
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=20.67 E-value=4.2e+02 Score=22.99 Aligned_cols=79 Identities=13% Similarity=0.084 Sum_probs=51.5
Q ss_pred eeeEeeecCCceeEEeEEe--cceEEEeecceeEEEEecCCCceEEee--cCCceEEEEEecCCCeEEEEECCCCeEEEE
Q psy15182 44 EIRKYKKKFGSEILCAALW--GVNLLIGTETGLMLLDRSGQGKVYQLV--NRRRFQQMEVLEGQNILVTISGKRNRVRVF 119 (366)
Q Consensus 44 ~~~~~~k~f~~~I~Caa~w--g~~LllGTeeGlyll~~~~~~~~~~l~--~~k~v~Ql~Vle~~~lLi~lsGk~~~L~v~ 119 (366)
++.+..+.-...|.|.+.= |+.|+-|..+|...+-.-..+...+.+ ...+|..+...++.+.|++- +.|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-SDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-ETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEE-CCCCEEEEE
Confidence 3444444455778887643 445888988887666532222222322 23478999999888877765 478999999
Q ss_pred Echh
Q psy15182 120 YLSW 123 (366)
Q Consensus 120 ~L~~ 123 (366)
++..
T Consensus 83 d~~~ 86 (304)
T 2ynn_A 83 NYNT 86 (304)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9854
No 84
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=20.50 E-value=2.8e+02 Score=25.83 Aligned_cols=52 Identities=8% Similarity=0.077 Sum_probs=34.3
Q ss_pred eeEEEEecCCCceEEeecC-CceEEEEEecCCC-eEEEEECCCCeEEEEEchhhh
Q psy15182 73 GLMLLDRSGQGKVYQLVNR-RRFQQMEVLEGQN-ILVTISGKRNRVRVFYLSWLK 125 (366)
Q Consensus 73 Glyll~~~~~~~~~~l~~~-k~v~Ql~Vle~~~-lLi~lsGk~~~L~v~~L~~L~ 125 (366)
.++++|.. ..++.+-+.- .....|.+-++-+ +|.+..+.++.|.++++...+
T Consensus 299 ~V~VID~~-t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 299 EVTSVTGL-VGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred eEEEEECC-CCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 37777763 2233332222 2578899988888 666666568899999986654
No 85
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=20.14 E-value=5.6e+02 Score=25.31 Aligned_cols=121 Identities=10% Similarity=0.106 Sum_probs=67.9
Q ss_pred CCceEEEECCCC----ceEEeecCCCC---CCCCcceEEEEecCCCCceEEEEEcce--------EEEEeCC-Cceeeee
Q psy15182 218 ADGFHAVDLDSA----MVYDIYLPKHI---QGPICPHCIVALPNSNGMQLLLCYDNE--------GVYVNTY-GKVSKNI 281 (366)
Q Consensus 218 ~~gF~~idl~~~----~~~~L~~p~~~---~~~~~p~~I~~l~~~~~~E~LLcy~~~--------~vfVn~~-G~~sr~~ 281 (366)
++.-++||+.+. .......|.+. .....||.+.-.++ .++++...- -+.+|.. ++..+.+
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd----Gi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~ 180 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD----AIYISALGNEEGEGPGGILMLDHYSFEPLGKW 180 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS----CEEEEEEEETTSCSCCEEEEECTTTCCEEEEC
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC----eEEEEcCCCcCCCCCCeEEEEECCCCeEEEEE
Confidence 455678888644 33333332221 12346887776664 266655432 3446755 5555554
Q ss_pred eeeeCCCCcEEEEccC----Ce-EEEEe---------------------CCeEEEEEccCCCEEEEEecc-C---CCcee
Q psy15182 282 LLQWGEMPTSVAYIGT----GQ-IMGWG---------------------NKAIEIRSVETGHLDGVFMHK-K---SQRLK 331 (366)
Q Consensus 282 ~l~W~~~P~sva~~~~----PY-il~f~---------------------~~~IEIR~v~tg~Lvq~i~~k-~---~~~lr 331 (366)
+.. ..|..++| .. .. +|.-+ .+.|-+..+.++.++|+|... . -+.++
T Consensus 181 ~~~--~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~ 257 (462)
T 2ece_A 181 EID--RGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELR 257 (462)
T ss_dssp CSB--CTTCCCCC-CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEE
T ss_pred ccC--CCCccccc-eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeE
Confidence 432 34554443 22 21 44444 489999999999999999842 1 12345
Q ss_pred EEEE-eCCEEEEEeC
Q psy15182 332 FLCE-RNDKVFFSSA 345 (366)
Q Consensus 332 ~L~~-~~d~vf~as~ 345 (366)
|+.+ .+...|+++.
T Consensus 258 f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 258 PLHDPTKLMGFINMV 272 (462)
T ss_dssp ECSSTTCCEEEEEEE
T ss_pred eeECCCCCEEEEEEe
Confidence 5545 4456888875
Done!