BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15184
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/165 (63%), Positives = 121/165 (73%), Gaps = 15/165 (9%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E PV ++LG+ NN + VKKTDFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWTHDPSE---------PVVTSQLGTVNNVIQVKKTDFEVFDA 165
Query: 62 LDVDSQDTTPKKD------DEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEP 115
L VDSQ + + Y Q SKP E+ PPILPPHLLQVILNKDT +SC+P
Sbjct: 166 LMVDSQKCSDVSELSSSPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDP 225
Query: 116 TLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
LLP+PNHVMLNHLYALSIKDGVMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 ALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 270
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 121/165 (73%), Gaps = 15/165 (9%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E P+ ++LG+ NN + VKKTDFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWTHDPSE---------PIVTSQLGTVNNIIQVKKTDFEVFDA 165
Query: 62 LDVDSQDTTPKKD------DEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEP 115
L VDSQ + + Y Q SKP E+ PPILPPHLLQVILNKDT +SC+P
Sbjct: 166 LMVDSQKCSDVSELSSSPPGPYHQEPYMSKPEERFKAPPILPPHLLQVILNKDTGISCDP 225
Query: 116 TLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
LLP+PNHVMLNHLYALSIKDGVMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 ALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 270
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 121/165 (73%), Gaps = 15/165 (9%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E P+ ++LG+ NN + VKKTDFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWTHDPSE---------PIVTSQLGTVNNIIQVKKTDFEVFDA 165
Query: 62 LDVDSQDTTPKKD------DEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEP 115
L VDSQ + + Y Q SKP E+ PPILPPHLLQVILNKDT +SC+P
Sbjct: 166 LMVDSQKCSDVSELSSSPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDP 225
Query: 116 TLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
LLP+PNHVMLNHLYALSIKDGVMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 ALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 270
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/165 (62%), Positives = 120/165 (72%), Gaps = 15/165 (9%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E P+ ++LG+ NN + VKKTDFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWTHDPSE---------PIVTSQLGTVNNIIQVKKTDFEVFDA 165
Query: 62 LDVDSQDTTPKKD------DEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEP 115
L VDSQ + + Y Q KP E+ PPILPPHLLQVILNKDT +SC+P
Sbjct: 166 LMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDP 225
Query: 116 TLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
LLP+PNHVMLNHLYALSIKDGVMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 ALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 270
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/165 (62%), Positives = 120/165 (72%), Gaps = 15/165 (9%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E P+ ++LG+ NN + VKKTDFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWTHDPSE---------PIVTSQLGTVNNIIQVKKTDFEVFDA 165
Query: 62 LDVDSQDTTPKKD------DEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEP 115
L VDSQ + + Y Q KP E+ PPILPPHLLQVILNKDT +SC+P
Sbjct: 166 LMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDP 225
Query: 116 TLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
LLP+PNHVMLNHLYALSIKDGVMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 ALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI 270
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 120/167 (71%), Gaps = 17/167 (10%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E PV ++LG+ NN + VKK+DFEVF+A
Sbjct: 115 ILDLPEGEHQYKFFVDGQWVHDPSE---------PVVTSQLGTINNLIHVKKSDFEVFDA 165
Query: 62 LDVDSQDTTPKKDDE--------YSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSC 113
L +DS +++ + Y Q + + E+ PPILPPHLLQVILNKDT +SC
Sbjct: 166 LKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISC 225
Query: 114 EPTLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
+P LLP+PNHVMLNHLYALSIKD VMVLS THRY+KKYVTTLLYKPI
Sbjct: 226 DPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 120/167 (71%), Gaps = 17/167 (10%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E PV ++LG+ NN + VKK+DFEVF+A
Sbjct: 114 ILDLPEGEHQYKFFVDGQWVHDPSE---------PVVTSQLGTINNLIHVKKSDFEVFDA 164
Query: 62 LDVDSQDTTPKKDDE--------YSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSC 113
L +DS +++ + Y Q + + E+ PPILPPHLLQVILNKDT +SC
Sbjct: 165 LKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISC 224
Query: 114 EPTLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
+P LLP+PNHVMLNHLYALSIKD VMVLS THRY+KKYVTTLLYKPI
Sbjct: 225 DPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 271
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 119/167 (71%), Gaps = 17/167 (10%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEA 61
I+DLPEGEH+YKF VDG+W +P E PV ++LG+ NN + VKK+DFEVF+A
Sbjct: 114 ILDLPEGEHQYKFFVDGQWVHDPSE---------PVVTSQLGTINNLIHVKKSDFEVFDA 164
Query: 62 LDVDSQDTTPKKDDE--------YSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSC 113
L +DS +++ + Y Q + + E+ PPILPPHLLQVILNKDT +SC
Sbjct: 165 LKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISC 224
Query: 114 EPTLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKPI 160
+P LLP+PNHVMLNHLYALS KD VMVLS THRY+KKYVTTLLYKPI
Sbjct: 225 DPALLPEPNHVMLNHLYALSTKDSVMVLSATHRYKKKYVTTLLYKPI 271
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 5 LPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEALDV 64
LP G +EY+F+VDG+W+ P+ P+ + G+ N L ++ E +++
Sbjct: 143 LPSGVYEYRFIVDGQWRHAPE---------LPLARDDAGNTFNILDLQDYVPEDIQSISG 193
Query: 65 DSQDTTPKKDDEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEPTLLPQPNHV 124
+P ++ YS ++ ++ + K+P P++PPHL +LN P+ LP+P HV
Sbjct: 194 FEPPQSP--ENSYSNLLLGAEDYSKEP--PVVPPHLQMTLLNLPAANPDIPSPLPRPQHV 249
Query: 125 MLNHLYALSIKDG--VMVLSTTHRYRKKYVTTLLYK 158
+LNHLY K G V+ L +THR+ KYVT +LYK
Sbjct: 250 ILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYK 285
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 44/181 (24%)
Query: 1 MIIDLPEGEHEYKFLVDGEW-------KVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKK 53
+++ L G +KFLVDG W E +L E S + +L+
Sbjct: 135 VLLQLRPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEANEKLGASIDERLSQVH 194
Query: 54 TDFEVFEALDVDSQDTTPKKDDEYSQVIPPSKPWEKQPGPPILPPHLLQ----------- 102
TD + E + ++YS IP L + LQ
Sbjct: 195 TDLPMEE----------KSESEQYSTEIPA-----------FLTSNTLQELKLPKPPSLP 233
Query: 103 -----VILNKDTPLSCEPTLLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLY 157
ILN +T + ++LP PNHV+LNHL A + + GV+ LS T RY +KYVTT ++
Sbjct: 234 PHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANTQLGVLALSATTRYHRKYVTTAMF 293
Query: 158 K 158
K
Sbjct: 294 K 294
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 93 PPILPPHLLQVILNKDTPLSCEPT--LLPQPNHVMLNHLYALSIKDGVMVLSTTHRYRKK 150
PP LPPHL VILN + + T LP PNHV+LNHL SIK + +++ RY++K
Sbjct: 347 PPQLPPHLENVILNSYSNAQTDNTSGALPIPNHVILNHLATSSIKHNTLCVASIVRYKQK 406
Query: 151 YVTTLLYKPI 160
YVT +LY P+
Sbjct: 407 YVTQILYTPL 416
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 93 PPILPPHLLQVILNK-----DTPLSCEPTLLPQPNHVMLNHLYALSIKDGVMVLSTTHRY 147
PP LPP L VILNK D LP PNHV+LNHL SIK + +++ RY
Sbjct: 340 PPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVRY 399
Query: 148 RKKYVTTLLYKPI 160
++KYVT +LY PI
Sbjct: 400 KQKYVTQILYTPI 412
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1
OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1
Length = 283
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 1 MIIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFE 60
++ LP G + YK +VDGE K P P +++G+ N L V +F
Sbjct: 137 ILFVLPSGIYHYKVIVDGESKYIPD---------LPFVADEVGNVCNILDVH--NFVPEN 185
Query: 61 ALDVDSQDTTPKKDDEYSQVIPPSKPWEKQPGPPILPPHLLQVILNKDTPLSCEPTLLPQ 120
+ + P D Y Q +P ++ + K+P +PP L +L + E + +
Sbjct: 186 PESIVEFEAPPSPDHSYGQTLPAAEDYAKEP--LAVPPQLHLTLLGT----TEETAIATK 239
Query: 121 PNHVMLNHLYALSIKDG-----VMVLSTTHRYRKKYVTTLLYKPI 160
P HV+LNH++ I+ G ++ L THR+ KY+T +LYKP+
Sbjct: 240 PQHVVLNHVF---IEQGWTPQSIVALGLTHRFESKYITVVLYKPL 281
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 9/52 (17%)
Query: 2 IIDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKK 53
I+DLPEGEH+YKFLVDG+W +P E PV ++LG+ NN + VKK
Sbjct: 80 ILDLPEGEHQYKFLVDGQWTHDPSE---------PVVTSQLGTVNNIIQVKK 122
>sp|Q9ZUU8|KINB3_ARATH SNF1-related protein kinase regulatory subunit beta-3
OS=Arabidopsis thaliana GN=KINB3 PE=1 SV=1
Length = 114
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 93 PPILPPHLLQVILNKDTPLSCEPTLLPQPNHVMLNHLYALSIKDG---VMVLSTTHRYRK 149
PP +PPHL +L + L P +V+LNHLY + +D V+ L +HR+R
Sbjct: 41 PPAVPPHLQHSLLGNQGSME----LAYAPQNVVLNHLY-IENRDAPRSVVALGFSHRFRT 95
Query: 150 KYVTTLLYKPI 160
K+VT ++YKP+
Sbjct: 96 KFVTVVIYKPV 106
>sp|A6ZZ19|SIP1_YEAS7 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SIP1 PE=3 SV=2
Length = 815
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 123 HVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKP 159
HV LNHL SI+D ++ ++ T RY K++T ++Y P
Sbjct: 767 HVNLNHLLTSSIRDEIISVACTTRYEGKFITQVVYAP 803
>sp|P32578|SIP1_YEAST SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP1 PE=1 SV=2
Length = 815
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 123 HVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKP 159
HV LNHL SI+D ++ ++ T RY K++T ++Y P
Sbjct: 767 HVNLNHLLTSSIRDEIISVACTTRYEGKFITQVVYAP 803
>sp|B3LFN4|SIP1_YEAS1 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SIP1 PE=3 SV=2
Length = 815
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 123 HVMLNHLYALSIKDGVMVLSTTHRYRKKYVTTLLYKP 159
HV LNHL SI+D ++ ++ T RY K++T ++Y P
Sbjct: 767 HVNLNHLLTSSIRDEIISVACTTRYEGKFITQVVYAP 803
>sp|Q9FEB5|DSP4_ARATH Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis
thaliana GN=DSP4 PE=1 SV=1
Length = 379
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 4 DLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNN 47
+LPEG+ EYK+++DGEW N E + P NK G NN
Sbjct: 298 ELPEGQFEYKYIIDGEWTHNEAEP-----FIGP---NKDGHTNN 333
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MIIDLPEGEHEYKFLVDGEWK 21
+I +L G H+YKF VDGEW+
Sbjct: 61 VICNLTPGYHQYKFFVDGEWR 81
>sp|Q6INU2|BSC1A_XENLA BSD domain-containing protein 1-A OS=Xenopus laevis GN=bsdc1-a PE=2
SV=1
Length = 413
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 39 ENKLGSKNNKLAVKK----TDFEVFEALDVDSQDTTPKKDDEYSQVIPPSKPWEKQ 90
E K G N ++A ++ +D VFE L+ DS +TP + + S+ WEK+
Sbjct: 329 EQKTGKSNTQMATQREDPPSDLRVFE-LNSDSGKSTPSNNGQKGSSTDISEDWEKE 383
>sp|Q5S1W2|BON2_ARATH Protein BONZAI 2 OS=Arabidopsis thaliana GN=BON2 PE=1 SV=2
Length = 586
Score = 31.2 bits (69), Expect = 3.1, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 30 IAFLVSPVQENKLGSKNNKLAVKKTDFE-VFEALDVDSQDTTPKKDD--------EYSQV 80
+A P KL + KT+ E VF L+++S+DT K D E+
Sbjct: 170 VAAQTQPQHNGKLIVHAEESLASKTNTEIVFRGLNLESKDTFSKSDPFLVISKIVEHGTP 229
Query: 81 IPPSKP--WEKQPGPPILPPHL-LQVILNKDTPLSCE 114
IP SK + P P P L +Q + +KD+PL E
Sbjct: 230 IPVSKTEVLKNDPNPLWKPVSLSVQQVGSKDSPLVIE 266
>sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis
thaliana GN=LSF1 PE=1 SV=1
Length = 591
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 3 IDLPEGEHEYKFLVDGEWKVNPQEVKCIAFLVSPVQENKLGSKNNKLAVKKTDFEVFEAL 62
+ L +G++ YK++++G+W+ + SP + + G+ NN + V +
Sbjct: 497 VRLTQGKYYYKYIINGDWRHSA---------TSPTERDDRGNTNNIIVVG-------DVA 540
Query: 63 DVDSQDTTPKKDDEYSQVI 81
+V P+KD +VI
Sbjct: 541 NVRPTIQQPRKDANIIKVI 559
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,475,425
Number of Sequences: 539616
Number of extensions: 2981360
Number of successful extensions: 6331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 6262
Number of HSP's gapped (non-prelim): 68
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)