Query psy15189
Match_columns 150
No_of_seqs 174 out of 813
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 22:51:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15189.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15189hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fo8_A Alpha-1,3-mannosyl-glyc 96.6 0.015 5.1E-07 46.3 9.9 112 15-134 71-190 (343)
2 2j0a_A Beta-1,3-N-acetylglucos 95.2 0.018 6.2E-07 44.4 4.3 105 27-139 84-199 (280)
3 3bcv_A Putative glycosyltransf 50.4 31 0.0011 24.1 5.4 37 36-78 84-120 (240)
4 1qg8_A Protein (spore coat pol 45.9 40 0.0014 23.8 5.4 94 18-119 73-172 (255)
5 1o97_C Electron transferring f 45.5 57 0.002 24.4 6.3 49 27-81 71-122 (264)
6 1nzj_A Hypothetical protein YA 44.6 32 0.0011 26.3 4.8 67 5-73 6-72 (298)
7 4fix_A UDP-galactofuranosyl tr 40.3 48 0.0016 28.2 5.6 45 18-62 249-294 (657)
8 2dam_A ETEA protein; KIAA0887, 34.5 42 0.0014 19.7 3.2 36 110-149 32-67 (67)
9 4g6z_A Glutamate-tRNA ligase; 34.5 80 0.0027 26.1 5.9 67 6-74 27-93 (490)
10 1efp_B ETF, protein (electron 30.4 1.3E+02 0.0046 22.1 6.2 50 27-82 70-124 (252)
11 2lpm_A Two-component response 29.9 45 0.0015 21.8 3.1 19 39-57 10-28 (123)
12 1efv_B Electron transfer flavo 22.5 1.8E+02 0.0061 21.6 5.6 50 27-82 73-127 (255)
No 1
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=96.64 E-value=0.015 Score=46.31 Aligned_cols=112 Identities=19% Similarity=0.178 Sum_probs=65.9
Q ss_pred CchhHHHH-----HHHH-HHHHHHHH-cCCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCccEEEeccccCCCCCC
Q psy15189 15 KKGEIGCF-----LSHY-NIWNEVVD-NNHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWDLIYLGRKKLSEKPD 87 (150)
Q Consensus 15 t~geiGC~-----lSH~-~~w~~~~~-~~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~dii~L~~~~~~~~~~ 87 (150)
.....||. ..|+ .+..++.+ .+.++++|||||.++.++|.+.+++.++.+.. |-.+..++.........
T Consensus 71 ~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~----D~~I~~ISa~n~~g~~~ 146 (343)
T 1fo8_A 71 QPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKA----DPSLWCVSAWNDNGKEQ 146 (343)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHH----CTTEEEEESCCTTCBGG
T ss_pred chhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhc----CCcEEEEecccCccccc
Confidence 45567773 2333 45555554 24689999999999999999988888877665 44455444322111110
Q ss_pred c-eecCcceEEeeCCcceeEEeeecHHHHHHHHhhCCCCCCchhhhhh
Q psy15189 88 T-WVSGSRYLVEASYSYWTLGYLLSRQGARKLTQARPLSNLLPVDEFL 134 (150)
Q Consensus 88 ~-~~~~~~~l~~~~~~~~t~aY~Is~~~A~klL~~~~~~~~~pvD~~l 134 (150)
. .......++...+ ...-|.+.+|++=+.+-..-|. ...|.|+
T Consensus 147 ~~~~~~~~~lyrs~~-f~~wGWa~wr~~W~e~~~~wp~---~~Wd~w~ 190 (343)
T 1fo8_A 147 MVDSSKPELLYRTDF-FPGLGWLLLAELWAELEPKWPK---AFWDDWM 190 (343)
T ss_dssp GSCTTCTTCEEEESS-CCCSSEEEEHHHHHHHGGGCCS---SCHHHHH
T ss_pred cccccCcceEEeecC-CCchhhhhcHHHHHHHhhhcch---hHHHHHH
Confidence 0 0011223444432 3345899999998876433332 2467665
No 2
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=95.23 E-value=0.018 Score=44.41 Aligned_cols=105 Identities=18% Similarity=0.147 Sum_probs=55.6
Q ss_pred HHHHHHHHcCCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCccEEEeccccCCC-CC-CceecCc-ceEEeeCCcc
Q psy15189 27 NIWNEVVDNNHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWDLIYLGRKKLSE-KP-DTWVSGS-RYLVEASYSY 103 (150)
Q Consensus 27 ~~w~~~~~~~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~dii~L~~~~~~~-~~-~~~~~~~-~~l~~~~~~~ 103 (150)
..++++++.+.+|.+..+||+.+... .|.++++..+. -.-+|+|...... .. ....++. .......+..
T Consensus 84 ~~~~~~l~~~~~Wf~~~DDDtyv~~~---nL~~~L~~~d~-----~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 155 (280)
T 2j0a_A 84 AEFDAFLVSGLRWFCHVDDDNYVNPK---ALLQLLKTFPQ-----DRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFAT 155 (280)
T ss_dssp HHHHHHHHHTCSEEEEEETTEEECHH---HHHHHHTTSCT-----TSCCEEECEEC-------------------CCEEC
T ss_pred HHHHHHhCCCCcEEEEeCCCcEEcHH---HHHHHHHhCCC-----CCCEEEEEeccCccccccccCccccccccccCccc
Confidence 34556666788999999999998532 23344443322 1236777543111 00 0000100 0001122345
Q ss_pred eeEEeeecHHHHHHHHhhCCC--------CCCchhhhhhHHHHc
Q psy15189 104 WTLGYLLSRQGARKLTQARPL--------SNLLPVDEFLPLLSG 139 (150)
Q Consensus 104 ~t~aY~Is~~~A~klL~~~~~--------~~~~pvD~~l~~~f~ 139 (150)
|-+||+||+.++++|...... ....|=|.++..+.+
T Consensus 156 GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~ 199 (280)
T 2j0a_A 156 GGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIE 199 (280)
T ss_dssp GGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHH
T ss_pred CCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHH
Confidence 567999999999999975211 001244888876665
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=50.44 E-value=31 Score=24.13 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCccEEEec
Q psy15189 36 NHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWDLIYLG 78 (150)
Q Consensus 36 ~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~dii~L~ 78 (150)
..++++++.||..+.+++.+.+.+.++.- +.+++..+
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~------~~~~v~~~ 120 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQKY------TCDAVFTG 120 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHHHH------TCSEEEC-
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHHhc------CCCEEEEe
Confidence 34899999999999998765554444431 35566544
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=45.92 E-value=40 Score=23.84 Aligned_cols=94 Identities=14% Similarity=0.041 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCccEEEeccccC--CCCCCc---eecC
Q psy15189 18 EIGCFLSHYNIWNEVVDNNHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWDLIYLGRKKL--SEKPDT---WVSG 92 (150)
Q Consensus 18 eiGC~lSH~~~w~~~~~~~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~dii~L~~~~~--~~~~~~---~~~~ 92 (150)
..|...+--.+++.+ ..+++++++||..+.+++.+.+.+.++ ..+ +.+++.-..... ...... ....
T Consensus 73 n~G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~---~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T 1qg8_A 73 KTRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELD---THP--EKAVIYSASKTYHLNENRDIVKETVRP 144 (255)
T ss_dssp SCHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHH---HCT--TCCEEEEEEEEEEEC---CEEEEEEEC
T ss_pred ccCHHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHH---hCC--CceEEEeceEEEEeCCCCcchhhccCc
Confidence 345444443444432 448999999999999987555444433 222 455554322111 110000 0000
Q ss_pred cceEE-eeCCcceeEEeeecHHHHHHHH
Q psy15189 93 SRYLV-EASYSYWTLGYLLSRQGARKLT 119 (150)
Q Consensus 93 ~~~l~-~~~~~~~t~aY~Is~~~A~klL 119 (150)
...+. .......+++.+++++..+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~~rr~~~~~~g 172 (255)
T 1qg8_A 145 AAQVTWNAPCAIDHCSVMHRYSVLEKVK 172 (255)
T ss_dssp CCSCBSCCTTTSCGGGEEEETHHHHHHH
T ss_pred hHHHHHhhcCCCccceEEEEHHHHHhhc
Confidence 00000 1122345678899999988864
No 5
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=45.47 E-value=57 Score=24.41 Aligned_cols=49 Identities=16% Similarity=0.235 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCeEEEEccCCc--C-chhHHHHHHHHHHHhhhCCCCCccEEEecccc
Q psy15189 27 NIWNEVVDNNHDIVMVLEDDVR--F-ESFFRQKLATILKELKTKTLPAWDLIYLGRKK 81 (150)
Q Consensus 27 ~~w~~~~~~~~~~~lIlEDD~~--l-~~~f~~~l~~~l~~~~~~~~~~~dii~L~~~~ 81 (150)
.+.+.++.-+.+-++.++|+.. . .......|.+++++. ++|+|.+|...
T Consensus 71 ~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~------~~dlVl~G~~s 122 (264)
T 1o97_C 71 ESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKE------APDMVFAGVQS 122 (264)
T ss_dssp HHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHH------CCSEEEEESCC
T ss_pred HHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhc------CCCEEEEcCCc
Confidence 4567777789999999998863 2 233445566665554 57899988754
No 6
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A*
Probab=44.62 E-value=32 Score=26.35 Aligned_cols=67 Identities=18% Similarity=0.318 Sum_probs=48.6
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCcc
Q psy15189 5 YADPYHKRPMKKGEIGCFLSHYNIWNEVVDNNHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWD 73 (150)
Q Consensus 5 ~~~~~~~~~lt~geiGC~lSH~~~w~~~~~~~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~d 73 (150)
++.+|.+.+--.-.||=+.+=+.-|-.+...+..+.+-+|| ......-.+..+.+++.+.+.+. +||
T Consensus 6 v~~RFAPsPtG~LHiG~~rtal~n~l~Ar~~~g~~ilRieD-tD~~R~~~~~~~~I~~dL~~LGl-~~D 72 (298)
T 1nzj_A 6 YIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIED-IDPPREVPGAAETILRQLEHYGL-HWD 72 (298)
T ss_dssp CEEEECCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECC-SCGGGSCTTHHHHHHHHHHHTTC-CCS
T ss_pred eEEEECcCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEEec-CCchhhHHHHHHHHHHHHHHcCC-CCC
Confidence 44566667777778888888888898888888789999998 22222233445667777788887 887
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=40.29 E-value=48 Score=28.21 Aligned_cols=45 Identities=16% Similarity=0.288 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHc-CCCeEEEEccCCcCchhHHHHHHHHHH
Q psy15189 18 EIGCFLSHYNIWNEVVDN-NHDIVMVLEDDVRFESFFRQKLATILK 62 (150)
Q Consensus 18 eiGC~lSH~~~w~~~~~~-~~~~~lIlEDD~~l~~~f~~~l~~~l~ 62 (150)
..|-.-.--...+.+... +.+++++|.||+.+.+++.+.+.+.++
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~ 294 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHR 294 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHH
Confidence 456666666677777765 679999999999999987655555544
No 8
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.51 E-value=42 Score=19.74 Aligned_cols=36 Identities=11% Similarity=-0.008 Sum_probs=27.8
Q ss_pred ecHHHHHHHHhhCCCCCCchhhhhhHHHHccCCCccccCC
Q psy15189 110 LSRQGARKLTQARPLSNLLPVDEFLPLLSGKHPEDLGLSG 149 (150)
Q Consensus 110 Is~~~A~klL~~~~~~~~~pvD~~l~~~f~~~~~~~~~~~ 149 (150)
-+...|+.+|+.. +| .++..++.+|+..+..-.|||
T Consensus 32 ~d~~~A~~~Le~~--~W--nLe~Av~~ff~~~~~~p~~~~ 67 (67)
T 2dam_A 32 ESMDQCRHTLEQH--NW--NIEAAVQDRLNEQEGSGPSSG 67 (67)
T ss_dssp SCHHHHHHHHHHH--TS--CHHHHHHHHHHSSCSSCSCCC
T ss_pred CCHHHHHHHHHHc--CC--CHHHHHHHHHhCCCCCCCCCC
Confidence 3688999999984 34 567777778888888888877
No 9
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis}
Probab=34.45 E-value=80 Score=26.05 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=49.8
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCeEEEEccCCcCchhHHHHHHHHHHHhhhCCCCCccE
Q psy15189 6 ADPYHKRPMKKGEIGCFLSHYNIWNEVVDNNHDIVMVLEDDVRFESFFRQKLATILKELKTKTLPAWDL 74 (150)
Q Consensus 6 ~~~~~~~~lt~geiGC~lSH~~~w~~~~~~~~~~~lIlEDD~~l~~~f~~~l~~~l~~~~~~~~~~~di 74 (150)
+.+|.+.+--.-.||=+.+=+.-|-.+...+..+.|-+|| +.....-.+..+.+++.+.+.+. +||-
T Consensus 27 ~~RFAPSPTG~lHiG~~rtal~n~l~Ar~~~G~filRieD-tD~~R~~~~~~~~i~~dl~wlGl-~~d~ 93 (490)
T 4g6z_A 27 RTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIED-TDVERSSQEAVDAILEGMAWLGL-DYDE 93 (490)
T ss_dssp EEEECCCCCSCCBHHHHHHHHHHHHHHHHTTCEEEEEECC-CCGGGCCHHHHHHHHHHHHHTTC-CCSE
T ss_pred eEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEeCC-CCcccccHHHHHHHHHHHHHcCC-CCCC
Confidence 4556666767778888888888888888888789999986 54443344556777788888888 8884
No 10
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=30.43 E-value=1.3e+02 Score=22.14 Aligned_cols=50 Identities=16% Similarity=0.230 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCCeEEEEc-cCCc---Cch-hHHHHHHHHHHHhhhCCCCCccEEEeccccC
Q psy15189 27 NIWNEVVDNNHDIVMVLE-DDVR---FES-FFRQKLATILKELKTKTLPAWDLIYLGRKKL 82 (150)
Q Consensus 27 ~~w~~~~~~~~~~~lIlE-DD~~---l~~-~f~~~l~~~l~~~~~~~~~~~dii~L~~~~~ 82 (150)
.+.+.++.-+.+-++.++ |+.. .++ .....|.+++++. ++|+|.+|....
T Consensus 70 ~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~------~~dlVl~G~~s~ 124 (252)
T 1efp_B 70 ETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAE------GTELIIAGKQAI 124 (252)
T ss_dssp HHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH------TCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhc------CCCEEEEcCCcc
Confidence 355667777889999999 8854 332 3444555665542 578999987653
No 11
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=29.92 E-value=45 Score=21.78 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=14.5
Q ss_pred eEEEEccCCcCchhHHHHH
Q psy15189 39 IVMVLEDDVRFESFFRQKL 57 (150)
Q Consensus 39 ~~lIlEDD~~l~~~f~~~l 57 (150)
.+||.|||......+...|
T Consensus 10 rILiVdD~~~~~~~l~~~L 28 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTL 28 (123)
T ss_dssp CEEEESSSTTTSHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHH
Confidence 5899999998876655544
No 12
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=22.45 E-value=1.8e+02 Score=21.55 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCCeEEEEc-cCC---cCch-hHHHHHHHHHHHhhhCCCCCccEEEeccccC
Q psy15189 27 NIWNEVVDNNHDIVMVLE-DDV---RFES-FFRQKLATILKELKTKTLPAWDLIYLGRKKL 82 (150)
Q Consensus 27 ~~w~~~~~~~~~~~lIlE-DD~---~l~~-~f~~~l~~~l~~~~~~~~~~~dii~L~~~~~ 82 (150)
.+.+.++.-|.+-++.++ |+. ..++ .....|.+++++. ++|+|.+|....
T Consensus 73 ~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~------~~dlVl~G~~s~ 127 (255)
T 1efv_B 73 ETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKE------KVDLVLLGKQAI 127 (255)
T ss_dssp HHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHH------TCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhc------CCCEEEEeCccc
Confidence 355667777889999999 874 3333 3445566665542 578999987653
Done!