BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1519
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383854502|ref|XP_003702760.1| PREDICTED: uncharacterized protein LOC100877992 [Megachile
rotundata]
Length = 194
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 19/199 (9%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MPIKYIGRTT GK LWEIL NLK +GVGR++ R FQRYPEPCY +ILKV +
Sbjct: 1 MPIKYIGRTTTLKGKPLWEILANLKNHGVGRMVIRYTFQRYPEPCYMRILKVAALPDTS- 59
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
++PH+ RKV V V S FRG +P ++I + SYKPDY LIPK EE +L +
Sbjct: 60 -KHPHDP-RKVRVLVESTFRGKTQPTPRQIDSVSYKPDYMLIPKDEEHRYLNHI---QPP 114
Query: 121 IQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLK-----READENH 175
++ + V+ PPLLK+++ R+ + +N TP V + NLK + A+E
Sbjct: 115 VKILPRTVEFPPLLKEMLIREAKKKNTTP--------VLHMPAIYNLKGIKNYKVAEEGE 166
Query: 176 PADIKIESFFGTPLSPELY 194
++ + GTP +P LY
Sbjct: 167 TPNVDVVMSLGTPATPHLY 185
>gi|157125424|ref|XP_001654334.1| mitochondrial ribosomal protein, S34, putative [Aedes aegypti]
gi|108882698|gb|EAT46923.1| AAEL001926-PA [Aedes aegypti]
Length = 182
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 111/192 (57%), Gaps = 18/192 (9%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R F+RYPEP Y KI+KV+ +
Sbjct: 4 IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSYMKIVKVETL------- 56
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P+E RKV V V FRG P++ EI + SYK DYRL+ KHEE+ + + EK
Sbjct: 57 -PNEATRKVKVTVEKTFRGRTYPKLVEINSVSYKADYRLLHKHEEESYCQAVQPTEK--- 112
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
I +D+PPLLK+ V R E +P +M + NN+ R A E I +
Sbjct: 113 IIPREIDLPPLLKEFVQR----ETGKSDP---KMAIKLKPGHNNVYRLAKEGEKPTIDVS 165
Query: 183 SFFGTPLSPELY 194
G P SP LY
Sbjct: 166 MGLGKPASPRLY 177
>gi|125977062|ref|XP_001352564.1| GA11991 [Drosophila pseudoobscura pseudoobscura]
gi|195168205|ref|XP_002024922.1| GL17855 [Drosophila persimilis]
gi|54641311|gb|EAL30061.1| GA11991 [Drosophila pseudoobscura pseudoobscura]
gi|194108352|gb|EDW30395.1| GL17855 [Drosophila persimilis]
Length = 188
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 21/197 (10%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ NL +GVGR++ R FQRYPEPCY +ILKVQ V
Sbjct: 6 IKYIGRTTDFKGNTLWELVSNLPNWGVGRMVIRNMFQRYPEPCYMRILKVQAVDEQ---- 61
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
+ RKV V V +RGV +P+ EI++TSYK DY L+P+ EE ++L +KK+
Sbjct: 62 --TDQIRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQAEEAKFL----SNQKKVA 115
Query: 123 --YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
+ +D+PPLL++ V + T E N F MKV F +T N L R A+ +K
Sbjct: 116 PVVLPTKIDLPPLLREYVKEE------TGEANPF-MKVHFKKTPNKLARMAEAGEEPTLK 168
Query: 181 IESFFGTP--LSPELYE 195
+ G P +S +LYE
Sbjct: 169 VSMDLGQPKSVSSKLYE 185
>gi|307191187|gb|EFN74884.1| 28S ribosomal protein S34, mitochondrial [Camponotus floridanus]
Length = 196
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MPIK+IGRTTDF GK LWEILGNLK +GVGRL+ R RFQRYPEPCY KILKV +
Sbjct: 1 MPIKFIGRTTDFKGKPLWEILGNLKDFGVGRLVIRNRFQRYPEPCYMKILKVAAMPPP-- 58
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
+ PH + RKV+V V VFRG+ P+ ++ + +YK DY L+PK +E +L E+K
Sbjct: 59 -DKPHTD-RKVIVLVERVFRGLKSPKPVQMDSATYKADYMLVPKDQEHLYLENNKSPEEK 116
Query: 121 IQYIDPWVDMPPLLKKVVARDLELE-NKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
I + D+PPLL +++AR ++ +K E +K +F R A+E +
Sbjct: 117 I--LPRTTDLPPLLSQIIARQMKARGDKVSEEPKLTLKYNFEGASIKSYRLAEEGESPTV 174
Query: 180 KI 181
K+
Sbjct: 175 KL 176
>gi|157125420|ref|XP_001654332.1| mitochondrial ribosomal protein, S34, putative [Aedes aegypti]
gi|108882696|gb|EAT46921.1| AAEL001943-PA [Aedes aegypti]
Length = 182
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 111/192 (57%), Gaps = 18/192 (9%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R F+RYPEP Y KI+KV+ +
Sbjct: 4 IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSYMKIVKVETL------- 56
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P+E RKV V V FRG P++ EI + SYK DYRL+ KHEE+ + + EK
Sbjct: 57 -PNEATRKVKVTVEKTFRGRTYPKLVEINSVSYKADYRLLHKHEEEPYCKAVQPTEK--- 112
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
I +D+PPLLK+ V R E +P ++ + NN+ R A E I +
Sbjct: 113 IIPREIDLPPLLKEFVQR----ETGKSDP---KIAIKLKPGHNNVYRLAKEGEKPTIDVS 165
Query: 183 SFFGTPLSPELY 194
G P SP LY
Sbjct: 166 MGLGKPASPRLY 177
>gi|195328099|ref|XP_002030754.1| GM25627 [Drosophila sechellia]
gi|194119697|gb|EDW41740.1| GM25627 [Drosophila sechellia]
Length = 188
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ +L +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ +E ++L K E +
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQETKYLNNKKKVEPVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL+++V+ E P P +MKV + T N + R A + + + +
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QMKVHYKLTDNKMARLAKDGEKSTVSLA 170
Query: 183 SFFGT--PLSPELYE 195
G P+S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185
>gi|357626909|gb|EHJ76808.1| ribosomal protein S34 [Danaus plexippus]
Length = 193
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 10/196 (5%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKY+GR+T+F GKTLWEI+G+LK YGVGR++ R F RYPEP + KI+KV+
Sbjct: 6 IKYVGRSTNFKGKTLWEIVGSLKNYGVGRIIVRSVFNRYPEPSFMKIVKVETC------- 58
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E R+V V+V FRG P++ EI+ TSYKPDY LIPK EE + L E ++
Sbjct: 59 -PDEERRRVRVWVEKTFRGRKLPQLTEIYRTSYKPDYNLIPKDEEYKLLEAVKNSESEV- 116
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ ++MPPL+K+ + +D E + + + +S+ + N + R A + IK
Sbjct: 117 ILPNTIEMPPLMKRFIVKDHE-KKGLETIKEYVLPLSYNHSPNRVARIAQGDEKPTIKFT 175
Query: 183 SFFGTPLSPELYEIKP 198
G P SP LYE P
Sbjct: 176 MGLGKPASPSLYEGIP 191
>gi|170047951|ref|XP_001851466.1| mitochondrial ribosomal protein S34 [Culex quinquefasciatus]
gi|167870209|gb|EDS33592.1| mitochondrial ribosomal protein S34 [Culex quinquefasciatus]
Length = 182
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 112/192 (58%), Gaps = 18/192 (9%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R F+RYPEP + +I+KV +
Sbjct: 4 IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSFMRIVKVDAL------- 56
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P+E RKV V V FRG P++ EI + SYK DYRL+ KHEE+ + R + EK
Sbjct: 57 -PNEETRKVKVTVEKTFRGRKYPKLVEIDSVSYKADYRLLHKHEEEAYCRGQARAEK--- 112
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
I +D+PPLL++ V R E +P ++ V N++ R A E ++ I
Sbjct: 113 IIPSEIDLPPLLREFVQR----ETGKVDP---KIVVKMKPGHNSIYRLAREGEKPNVDIS 165
Query: 183 SFFGTPLSPELY 194
G P SP LY
Sbjct: 166 MGLGKPASPSLY 177
>gi|194748741|ref|XP_001956803.1| GF10114 [Drosophila ananassae]
gi|190624085|gb|EDV39609.1| GF10114 [Drosophila ananassae]
Length = 188
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 113/195 (57%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKY GRTTDF G TLWE++ L +GVGR+L R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYFGRTTDFRGNTLWELVSELPNWGVGRMLIRNMFQRYPEPCYMRILKVQAVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ EE ++L K E+ +
Sbjct: 61 QPGEE-RKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDEEAKYLNNNKKVEEVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL++ V E N P+ MKV F T N L R A + +
Sbjct: 119 -LPTLIDLPPLLREFVTE--ETGNSNPQ-----MKVHFKRTHNKLARLAKDGEKPSVSFG 170
Query: 183 SFFGT--PLSPELYE 195
G P+S +LYE
Sbjct: 171 VGLGQPKPVSAKLYE 185
>gi|156553673|ref|XP_001603882.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Nasonia
vitripennis]
Length = 194
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 11/197 (5%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MP KYIG+T DF GKTLWEILGNLK +GVGR++ R RFQRY EPCY+KI+KV+ + + N
Sbjct: 1 MPYKYIGKTVDFKGKTLWEILGNLKNFGVGRMIARNRFQRYDEPCYYKIMKVEALPNPDN 60
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
+ H RKV+ V FRG+ + ++ ++ + +YK DY L+PKH+E E+ E+
Sbjct: 61 VTY-HGQQRKVIALVEKTFRGIKQEKLVQMESATYKADYFLVPKHKEAEFSNTVTVKER- 118
Query: 121 IQYIDPW-VDMPPLLKKVVARDLELEN-KTPEPNSFRMKVSFLETCNNLKREADENH-PA 177
I P ++ PPL+K+ V R ++LE K EP +M + + ++ R A E P
Sbjct: 119 ---IFPREMEFPPLMKEFVIRQMKLEGIKNKEP---KMPIKYNDSGLKTYRVAKEGETPT 172
Query: 178 DIKIESFFGTPLSPELY 194
+ + GTP SP LY
Sbjct: 173 EPEPSIGLGTPASPSLY 189
>gi|194873631|ref|XP_001973247.1| GG15996 [Drosophila erecta]
gi|190655030|gb|EDV52273.1| GG15996 [Drosophila erecta]
Length = 188
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 117/195 (60%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ +L +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ +E ++L K E +
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLSNNKKVEPVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL+++V+ E P P +M+V F T N + R A + +K
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QMRVYFKVTDNKIARLAKDGENPTVKFA 170
Query: 183 SFFGTP--LSPELYE 195
G P ++ +LYE
Sbjct: 171 LGVGQPKAVAAKLYE 185
>gi|24665233|ref|NP_524104.2| mitochondrial ribosomal protein S34 [Drosophila melanogaster]
gi|23093336|gb|AAF49483.2| mitochondrial ribosomal protein S34 [Drosophila melanogaster]
gi|255653086|gb|ACU24741.1| RH73723p [Drosophila melanogaster]
Length = 188
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ NL +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ +E ++L K E I
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVI- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +++PPLL+++V+ E P P +MKV + T N + R A + +
Sbjct: 119 -LPTKIELPPLLRELVSE----ETGNPNP---QMKVHYKLTDNKMARLAKDGEKPTVNFA 170
Query: 183 SFFGT--PLSPELYE 195
G P+S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185
>gi|195590775|ref|XP_002085120.1| GD14631 [Drosophila simulans]
gi|194197129|gb|EDX10705.1| GD14631 [Drosophila simulans]
Length = 188
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ +L +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ +E ++L K E +
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL+++V+ E P P +MKV + T N + R A + +
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QMKVHYKLTDNKMARLAKDGEKPTVSFA 170
Query: 183 SFFGT--PLSPELYE 195
G P+S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185
>gi|195496488|ref|XP_002095713.1| GE19560 [Drosophila yakuba]
gi|194181814|gb|EDW95425.1| GE19560 [Drosophila yakuba]
Length = 188
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKY GRTTDF G TLWE++ +L +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYFGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK D+ L+P+ +E ++L K E +
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADFELVPQDQEAKYLNNKKKVEPAV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL+++V+ E P P ++K+ F T N R A + + +K
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QIKIHFKVTDNKTARLAKDGEQSTVKFA 170
Query: 183 SFFGT--PLSPELYE 195
G P+S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185
>gi|195011973|ref|XP_001983411.1| GH15885 [Drosophila grimshawi]
gi|193896893|gb|EDV95759.1| GH15885 [Drosophila grimshawi]
Length = 188
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G +LWEI+GNL +GVGR++ R FQRYPEPCY +ILKVQ + E
Sbjct: 6 IKYIGRTTDFRGNSLWEIVGNLPDWGVGRMVIRNMFQRYPEPCYMRILKVQAID-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P+E RKV V V +RG+ +P+ EI++TSYK DY L+P EE ++L K +
Sbjct: 61 QPNE-VRKVRVTVEKTWRGITQPKPVEIYSTSYKADYELVPLSEEHKFLTNNKKAASVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +D+PPLL++ V ++T E N +M V F +T N R A +++
Sbjct: 119 -LPTKLDLPPLLREYV------RDETGEMNP-QMAVHFKKTHNKNARLAQAGEQPTLQMS 170
Query: 183 SFFG--TPLSPELYE 195
G P+S +LY+
Sbjct: 171 MDVGKPAPISAKLYD 185
>gi|195374878|ref|XP_002046230.1| GJ12788 [Drosophila virilis]
gi|194153388|gb|EDW68572.1| GJ12788 [Drosophila virilis]
Length = 188
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 118/195 (60%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWEI+GNL +G+GR++ R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWEIVGNLSDWGIGRMVIRNMFQRYPEPCYMRILKVQAVN-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P +N RKV V V +RGV +P+ EI++TSYK DY L+P +E ++L T K E +
Sbjct: 61 QP-DNERKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPVDQEHKFLTNTKKVEPVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +++PPLL++ + +++T + N + V F +T N L R A ++
Sbjct: 119 -LPTKMELPPLLREYI------KDETGDANPL-INVHFKKTHNKLARLAQAGEQPTRQLS 170
Query: 183 SFFGTP--LSPELYE 195
G P +S +LY+
Sbjct: 171 MDVGQPAKVSAKLYD 185
>gi|158286548|ref|XP_308803.4| AGAP006953-PA [Anopheles gambiae str. PEST]
gi|157020521|gb|EAA04429.4| AGAP006953-PA [Anopheles gambiae str. PEST]
Length = 183
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 19/193 (9%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R F+RYPEP + KI+KV+ + ++
Sbjct: 4 IKYIGRTTDFRGKTLWEIVGNLKNFGVGRIVVRSMFERYPEPSFMKIVKVEALPNE---- 59
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
E RKV V V FRG P + +I + SYK DYRL+ KHEE + + + EK
Sbjct: 60 ---EPARKVRVTVEKTFRGQKSPNLVQIESVSYKADYRLLSKHEEPSYCKLVDRAEK--- 113
Query: 123 YIDPW-VDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKI 181
I P +D+PPLL++ +AR E P P ++ + + R A E +++
Sbjct: 114 -IFPREIDLPPLLQEFIAR----ETGKPAP---KVPIKLKAGRESRYRVAQEGEQPTVEV 165
Query: 182 ESFFGTPLSPELY 194
G P SP LY
Sbjct: 166 AMNIGKPASPSLY 178
>gi|195135677|ref|XP_002012259.1| GI16536 [Drosophila mojavensis]
gi|193918523|gb|EDW17390.1| GI16536 [Drosophila mojavensis]
Length = 188
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
I+YIGRTTDF G TLWEI+GNL +G+GR++ R FQRYPEPCY +ILKVQ V + E
Sbjct: 6 IQYIGRTTDFRGNTLWEIVGNLPDWGIGRMVIRNMFQRYPEPCYMRILKVQAVDEQADSE 65
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
RKV V V +RGV +P+ EI++TSYK DY L+P +E ++L K + +
Sbjct: 66 ------RKVRVTVQKTWRGVTQPKPVEIYSTSYKADYELVPVDQEHKYLENKKKVDSVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +++PPLL++ + +++T +PN + V F +T N R A + +++
Sbjct: 119 -LPTKIELPPLLREYI------KDETGDPNPM-INVHFKKTHNKQARLAKDGEQPTLQLS 170
Query: 183 SFFGTP--LSPELYE 195
G P + +LY+
Sbjct: 171 MDMGKPSTVGAKLYD 185
>gi|312372836|gb|EFR20711.1| hypothetical protein AND_19635 [Anopheles darlingi]
Length = 183
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 112/194 (57%), Gaps = 21/194 (10%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R F+RYPEP + KILKV+ + ++
Sbjct: 4 IKYIGRTTDFRGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSFMKILKVEALPNE---- 59
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
E YRKV V + FRG P ++ + SYK DYRL+ KHEE+ + + + EK
Sbjct: 60 ---EPYRKVRVTMEKTFRGRKSPHPVQVESVSYKADYRLLSKHEEESYCKLVERQEK--- 113
Query: 123 YIDPW-VDMPPLLKKVVARDLELENKTPEPN-SFRMKVSFLETCNNLKREADENHPADIK 180
I P +++PPLL+ VAR E P P ++KV N R A+E +
Sbjct: 114 -IFPREIELPPLLRDFVAR----ETGKPAPMIPIKLKVGR----ENHYRLANEGERPTVA 164
Query: 181 IESFFGTPLSPELY 194
+ G P SP LY
Sbjct: 165 VTMKIGKPASPSLY 178
>gi|332025237|gb|EGI65411.1| 28S ribosomal protein S34, mitochondrial [Acromyrmex echinatior]
Length = 196
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 93/143 (65%), Gaps = 6/143 (4%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MPIK+IGRTTDF GK LWEI+ NLK +GVGRL+ R RFQRYPEPCY KILKV +
Sbjct: 1 MPIKFIGRTTDFKGKPLWEIVANLKNFGVGRLVIRNRFQRYPEPCYMKILKVAGMP---- 56
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
L + N RKVMV V VFRG+ + ++ +++YK DY LIPK +E +L T EK+
Sbjct: 57 LPDRPYNDRKVMVLVEKVFRGIKSSKPVQLDSSTYKADYMLIPKDQEHIFLNNTKVVEKR 116
Query: 121 IQYIDPWVDMPPLLKKVVARDLE 143
I + ++PPL ++ ++
Sbjct: 117 I--MPKTTELPPLFSHLIINQMK 137
>gi|195478850|ref|XP_002086533.1| GE23182 [Drosophila yakuba]
gi|194186323|gb|EDW99934.1| GE23182 [Drosophila yakuba]
Length = 175
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 15/171 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKY GRTTDF G TLWE++ +L +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYFGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK D+ L+P+ +E ++L K E +
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADFELVPQDQEAKYLNNKKKVEPAV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADE 173
+ +D+PPLL+++V+ E P P ++K+ F T N R A +
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QIKIHFKVTDNKTARLAKD 161
>gi|322792856|gb|EFZ16689.1| hypothetical protein SINV_10378 [Solenopsis invicta]
Length = 199
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 93/145 (64%), Gaps = 10/145 (6%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MPIK IGRTTDF GK LWEILGNLK +GVGRL+ R RFQRYPEPCY +ILKV
Sbjct: 1 MPIKLIGRTTDFKGKPLWEILGNLKNFGVGRLVIRNRFQRYPEPCYMRILKV------AG 54
Query: 61 LENPHENY--RKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE 118
+ P E Y RKVMV V VFRG + ++ + +YK DY+L+PK +E +L T E
Sbjct: 55 MPLPTEPYTDRKVMVLVERVFRGHKNSKPVQLDSATYKADYQLVPKDQEHLYLNNTKVPE 114
Query: 119 KKIQYIDPWVDMPPLLKKVVARDLE 143
+I + ++PPL ++V R ++
Sbjct: 115 MRI--LPRTTNLPPLFSQMVIRQMK 137
>gi|91095101|ref|XP_968495.1| PREDICTED: similar to mitochondrial ribosomal protein, S34,
putative [Tribolium castaneum]
Length = 197
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 5/174 (2%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MP KYIGRTT++ GKTLWEI+GNLK +GVGRL+ R F+RYPE +FKILKV+P+
Sbjct: 1 MPYKYIGRTTNYKGKTLWEIIGNLKNFGVGRLVIRSTFERYPETSFFKILKVEPLACPEV 60
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
++ RKV V V FRG+ P+ I +TSYK DY+LIPK EE ++ + + ++
Sbjct: 61 --QTMDDQRKVRVLVEKTFRGITYPKPITIESTSYKADYQLIPKDEEHKYTSKV-EAKRD 117
Query: 121 IQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADEN 174
I+ + ++ PPL+K V+ R E + K + + ++++ + +T R A+E
Sbjct: 118 IKILQRTMEFPPLMKDVLMR--ENKAKGEDVHDLKLEIIYHKTKTGKYRVAEEG 169
>gi|350427860|ref|XP_003494905.1| PREDICTED: hypothetical protein LOC100747148 [Bombus impatiens]
Length = 193
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPV-QHDG 59
M IKYIGRT F GK LWEILGNLK +GVGR++ R Q+YPE Y +ILKV +
Sbjct: 1 MVIKYIGRTHTFKGKPLWEILGNLKNHGVGRMVIRSAQQKYPEVSYMRILKVVGLPDTSK 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
++ +P RKVMV V VFRG P + ++ +YKPDY LIPK +E ++ +T +
Sbjct: 61 HIHDP----RKVMVLVEKVFRGQKSPTLVQMDGATYKPDYVLIPKDQEAKYTNQT--KVQ 114
Query: 120 KIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
+++ + D PPLLKK++ +E + + ++K+ + R A+EN +
Sbjct: 115 QLRLMPRTTDFPPLLKKIL-----MEKQGKDTPDLKLKIVYSTLGIKSYRVAEENETPTV 169
Query: 180 KIESFFGTPLSPELY-EIKPEVA 201
+I+ G P SP LY IK E A
Sbjct: 170 EIKMGLGNPASPSLYNNIKQEDA 192
>gi|240848845|ref|NP_001155738.1| 28S ribosomal protein S34, mitochondrial [Acyrthosiphon pisum]
gi|239791283|dbj|BAH72130.1| ACYPI008030 [Acyrthosiphon pisum]
Length = 176
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
M +K IGRTT+ GKTLWEILGNL+ GVGRL+ R + RY EP +F++L V+P
Sbjct: 1 MSVKLIGRTTNLYGKTLWEILGNLRTTGVGRLVTRNSYDRYEEPSFFRVLSVEPTAQ--- 57
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
+ RK++V+ +FRG E EI++ SYKPDYRLIPK EEQ W R + +
Sbjct: 58 ---IEDKARKIIVHAEKIFRGKHYKEPVEIYSVSYKPDYRLIPKDEEQLWWDRLANCKPR 114
Query: 121 IQYIDPWVDMPPLLKKVVARD 141
+++ +++PPL+K V+ RD
Sbjct: 115 EKFVPGSIELPPLMKLVLERD 135
>gi|340723995|ref|XP_003400371.1| PREDICTED: hypothetical protein LOC100646924 [Bombus terrestris]
Length = 193
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPV-QHDG 59
M IKYIGRT F GK LWEILGNLK +GVGR++ R Q+YPE Y +I+KV +
Sbjct: 1 MVIKYIGRTHTFKGKPLWEILGNLKNHGVGRIVIRSAQQKYPEASYMRIMKVVALPDTSK 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
++ +P RKVMV V VFRG P + ++ +YKPDY LIPK +E +++ T E
Sbjct: 61 HIHDP----RKVMVLVEKVFRGQKSPTLVQMDGATYKPDYVLIPKDQEAKYINETKVPE- 115
Query: 120 KIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
++ + D PPLLKK++ +E + + ++K+ + R A+E+ +
Sbjct: 116 -LRLMPRTTDFPPLLKKIL-----IEKQGKDTPDLKLKIVYSTLGIKSYRVAEEDETPTV 169
Query: 180 KIESFFGTPLSPELY 194
I+ G P+SP LY
Sbjct: 170 DIKVGLGNPVSPCLY 184
>gi|195435932|ref|XP_002065932.1| GK13981 [Drosophila willistoni]
gi|194162017|gb|EDW76918.1| GK13981 [Drosophila willistoni]
Length = 188
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 17/195 (8%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ L +G GR++ R FQRYPEPCY +ILKVQ N
Sbjct: 6 IKYIGRTTDFRGSTLWELVSTLPNWGEGRMVIRNMFQRYPEPCYMRILKVQAEDAQAN-- 63
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
RKV V V +RGV +P+ EIF+TSYK DY L+P EE ++L + K +
Sbjct: 64 ----EIRKVRVTVEKTWRGVTQPKPVEIFSTSYKADYELVPVEEESKFLNNSKKVAPVV- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ ++ PPLL++ + + T E N MKV F +T N R A ++
Sbjct: 119 -LPKHIEFPPLLREYIREE------TGEANPM-MKVHFKKTHNKQARVAQPGEKPSKEVS 170
Query: 183 SFFGTP--LSPELYE 195
G P ++ +LYE
Sbjct: 171 MDLGQPAKVASKLYE 185
>gi|87248361|gb|ABD36233.1| ribosomal protein S34 [Bombyx mori]
Length = 195
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
+KY+G TTDF GK+L EI+G+LK +GVG ++ F RYPEP + KI+KVQ
Sbjct: 7 MKYVGSTTDFKGKSLGEIVGSLKNFGVGSIIVSSVFLRYPEPSFMKIVKVQTC------- 59
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGK-GEKKI 121
P E V V V F G P + E++ TSYK DY+LIPK EE L G K
Sbjct: 60 -PDEESSSVRVGVEKTFSGQKLPNITEMYRTSYKTDYQLIPKSEETSLLESMNTIGNKAD 118
Query: 122 QYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKI 181
+ ++MPPL+K + +D E + F M +S+ ++ N+ + A N +K
Sbjct: 119 VMLPNSIEMPPLMKLFIIKDHE-KKGLETSKDFMMPLSYNQSPNSTNKMAKANEQPTMKF 177
Query: 182 ESFFGTPLSPELYEIKP 198
G P+SP LY+ P
Sbjct: 178 TMGLGKPVSPSLYDGIP 194
>gi|332372905|gb|AEE61594.1| unknown [Dendroctonus ponderosae]
Length = 200
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQ--PVQHD 58
MP KYIGRT DF GK+LWEI+GNLK +GVGR + R + QRY EP Y KILKV+ P D
Sbjct: 1 MPYKYIGRTHDFVGKSLWEIVGNLKNFGVGRFVARGKHQRYLEPSYMKILKVETLPRPED 60
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE 118
++ +N RKV V V FRG + I SYK DYRLIPK EEQ + +
Sbjct: 61 ESI----DNLRKVRVLVEQTFRGKTVTKPVLIERVSYKTDYRLIPKDEEQTYCKFDQISV 116
Query: 119 KKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLK-READENHPA 177
+ + ++D PP+ K++ R+ L P ++++ + + +K + A+E
Sbjct: 117 IPEKILPKYMDFPPIFKQLNIRE-SLNRGGPTKEDLQLEIVYNNSSKKMKYKIAEEGEEP 175
Query: 178 DIKIESFFGTPLSPELY 194
+KI + G P+ P LY
Sbjct: 176 TVKIATGVGQPVVPRLY 192
>gi|48098273|ref|XP_392037.1| PREDICTED: hypothetical protein LOC408493 [Apis mellifera]
Length = 195
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 107/196 (54%), Gaps = 12/196 (6%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPV-QHDG 59
M IKYIGR GK LWEILGNLK +GVGR++ R QRYPE CY KILKV +
Sbjct: 1 MVIKYIGRKHYLKGKPLWEILGNLKNHGVGRMIIRNTQQRYPEACYMKILKVAALPDTSK 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
+ +P R V+V V VFRG P +I ++KPDY LIPK +E ++ RT ++
Sbjct: 61 HFHDP----RNVVVLVEQVFRGKKLPLPVQIDTVTFKPDYMLIPKDQEANYINRT---KQ 113
Query: 120 KIQYIDP-WVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPAD 178
IQ I P + PPLLK+++ R L+ E + ++ + + + A+E
Sbjct: 114 PIQKIMPRTTNFPPLLKEILMRQKNLKE---ESSDLKLTIKYAPLGIKNYKIAEEGETPT 170
Query: 179 IKIESFFGTPLSPELY 194
+ IE G P SP LY
Sbjct: 171 VNIEIGLGEPASPSLY 186
>gi|380021807|ref|XP_003694748.1| PREDICTED: uncharacterized protein LOC100868922 [Apis florea]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 10/195 (5%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPV-QHDG 59
M IKYIGRT GK LWEILGNLK GVGR++ R QRYPE Y KILKV +
Sbjct: 1 MVIKYIGRTHYLKGKPLWEILGNLKNNGVGRMIIRSTQQRYPEASYMKILKVAALPDTSK 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
+ +P R V+V V VFRG +I +YKPDY LIPK +E ++ RT + +
Sbjct: 61 HFHDP----RNVIVLVEQVFRGKKLSIPVQIDTVTYKPDYILIPKDQEANYINRTQQPTQ 116
Query: 120 KIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
+I + + PPLLK+++ R +L+ + ++ ++K+ + + A+E I
Sbjct: 117 RI--MPTTTNFPPLLKEILMRQKDLKE---DSSNLKLKLKYASLGIKNYKIAEEGETPTI 171
Query: 180 KIESFFGTPLSPELY 194
I+ G P SP LY
Sbjct: 172 NIDIGLGEPASPSLY 186
>gi|270015507|gb|EFA11955.1| hypothetical protein TcasGA2_TC008556 [Tribolium castaneum]
Length = 581
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 11/132 (8%)
Query: 14 GKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPH----ENYR 69
GKTLWEI+GNLK +GVGRL+ R F+RYPE +FKILKV+P L P ++ R
Sbjct: 398 GKTLWEIIGNLKNFGVGRLVIRSTFERYPETSFFKILKVEP------LACPEVQTMDDQR 451
Query: 70 KVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVD 129
KV V V FRG+ P+ I +TSYK DY+LIPK EE ++ + + ++ I+ + ++
Sbjct: 452 KVRVLVEKTFRGITYPKPITIESTSYKADYQLIPKDEEHKYTSKV-EAKRDIKILQRTME 510
Query: 130 MPPLLKKVVARD 141
PPL+K V+ R+
Sbjct: 511 FPPLMKDVLMRE 522
>gi|307205456|gb|EFN83788.1| 28S ribosomal protein S34, mitochondrial [Harpegnathos saltator]
Length = 196
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
MPIK IGRTT GK LWEILGNLK +GVGRL+ R FQRYPE CY KILKV +
Sbjct: 1 MPIKLIGRTTYLKGKPLWEILGNLKNFGVGRLVIRNCFQRYPEACYMKILKVAAMPAS-- 58
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
P+++ R V+ V VFRG + + ++YKPD+ L+PK +E +L RT KK
Sbjct: 59 -TEPYKD-RNVIALVDEVFRGRKNSKPTQYDLSTYKPDFMLVPKDQEHLYLERTVMPVKK 116
Query: 121 IQYIDPWVDMPPLLKKVVARDL 142
+ + ++ PPL +++ +
Sbjct: 117 V--VPRTMEFPPLFTEMLMHQM 136
>gi|427786593|gb|JAA58748.1| Putative mitochondrial ribosomal protein s34 [Rhipicephalus
pulchellus]
Length = 186
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 29/186 (15%)
Query: 1 MP-IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDG 59
MP IKYIG + + GK L +LGNLK +GVGR++ R F+RYPEP Y+ I KV+P D
Sbjct: 1 MPRIKYIGYPSPYVGKHLLWLLGNLKNFGVGRVVTRTSFERYPEPSYYVITKVRPYMDDA 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
N V+ +VFRG +Q + PDY+L+PK EE L
Sbjct: 61 NQYGD--------VWAETVFRGRRLGVIQ--LESPQVPDYKLVPKSEEARLL-------- 102
Query: 120 KIQYIDP-------WVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREAD 172
+ +DP ++ MPPL++ +V RDL+ + EP +++ + + R A+
Sbjct: 103 SLPVVDPVAKVLPRYLKMPPLMRIIVERDLKAKGVVEEP---KLRAVYSSSYVRSYRIAE 159
Query: 173 ENHPAD 178
E D
Sbjct: 160 EGETPD 165
>gi|442756229|gb|JAA70274.1| Putative mitochondrial ribosomal protein s34 [Ixodes ricinus]
Length = 189
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIG + GK L IL NLK +GVGR++ R F+RYPEP Y+ I KV P D N
Sbjct: 4 IKYIGYPSPHLGKHLLWILSNLKDFGVGRVVTRSMFERYPEPSYYVIKKVVPYMDDAN-- 61
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
+ MVY +FRG I +T Y PDYRL+PK EE +L E K
Sbjct: 62 ------KYGMVYADCIFRGRRLRGDGHIPST-YLPDYRLVPKSEEHRYLDHP-IDESKPM 113
Query: 123 YIDPWVDMPPLLKKVVARDLELEN 146
+ + PLL+K+V RD++ +
Sbjct: 114 VLPRYRPFAPLLRKMVIRDMKAKG 137
>gi|427778783|gb|JAA54843.1| Putative mitochondrial ribosomal protein s34 [Rhipicephalus
pulchellus]
Length = 221
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 25/148 (16%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIG + + GK L +LGNLK +GVGR++ R F+RYPEP Y+ I KV+P D N
Sbjct: 4 IKYIGYPSPYVGKHLLWLLGNLKNFGVGRVVTRTSFERYPEPSYYVITKVRPYMDDANQY 63
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
V+ +VFRG +Q + PDY+L+PK EE L +
Sbjct: 64 GD--------VWAETVFRGRRLGVIQ--LESPQVPDYKLVPKSEEARLL--------SLP 105
Query: 123 YIDP-------WVDMPPLLKKVVARDLE 143
+DP ++ MPPL++ +V RDL+
Sbjct: 106 VVDPVAKVLPRYLKMPPLMRIIVERDLK 133
>gi|346473359|gb|AEO36524.1| hypothetical protein [Amblyomma maculatum]
Length = 186
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 1 MP-IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDG 59
MP IKY+G + + GK L ILGNLK +GVGR++ R F+RY E Y+ I KV P D
Sbjct: 1 MPRIKYVGYPSTYVGKHLMWILGNLKDFGVGRIVTRTGFERYSEHSYYVIKKVIPYMDDA 60
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
N V+ +VFRG +Q + PDY+L+PK EE L K +
Sbjct: 61 NQYGE--------VWADTVFRGRRIGVIQ--LESPQVPDYKLVPKSEEGRLLSLPVK-DA 109
Query: 120 KIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
+ + +++MPPL + + RDL+ + EP +++ + + R A+E D
Sbjct: 110 VPKVLPRYLEMPPLFRMIAERDLKAKGIDSEP---KLRAVYSNPYTKVYRIAEEGETPDT 166
Query: 180 KIESF 184
++
Sbjct: 167 ELRDM 171
>gi|242009093|ref|XP_002425327.1| mitochondrial 28S ribosomal protein S34, putative [Pediculus
humanus corporis]
gi|212509101|gb|EEB12589.1| mitochondrial 28S ribosomal protein S34, putative [Pediculus
humanus corporis]
Length = 205
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 13/142 (9%)
Query: 1 MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
M I+ IG GK LWEI+GNLK +GVGRL+ +Y EP +FKI+KVQP+
Sbjct: 1 MKIEKIGIKIPHVGKPLWEIVGNLKNFGVGRLIIDSLTLKYSEPSFFKIVKVQPLPPPTK 60
Query: 61 LENPHENY-RKVMVYVASVFRGVLEPEVQEIF--ATSYKPDYRLIPKHEEQEWLRRTGKG 117
E+Y R V V+ +F+G +++EI + P++ LIPKHEE+++L+ +
Sbjct: 61 -----EHYDRNVFVWAEEIFKG---KKIEEIVFKKKNEMPNFILIPKHEEEKYLKLAEEY 112
Query: 118 EKK-IQYIDP-WVDMPPLLKKV 137
KK + I P ++ PPL KK+
Sbjct: 113 SKKNLNRIVPKYMYWPPLYKKL 134
>gi|391334810|ref|XP_003741793.1| PREDICTED: uncharacterized protein LOC100898025 [Metaseiulus
occidentalis]
Length = 219
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
I+YIG + GK L +IL NLK +GVGR+ R + P ++ + KV+P
Sbjct: 34 IQYIGHPSKLYGKHLMKILANLKDFGVGRMFVRGIYANEEVPTFYIVKKVKPAM------ 87
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
+P + V+ + FRGV + V I S+ PD+RL+ K +E+++ K + I
Sbjct: 88 DPDLIWGD--VHAQTYFRGV-DKGVSVI--KSHLPDFRLVHKEDEEKYFAAVIK-DPVIT 141
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNS 153
+ ++ PLLK ++ RD E +T +PN+
Sbjct: 142 ILPREMECSPLLKMLIKRDAESRGETFDPNT 172
>gi|405969425|gb|EKC34396.1| 28S ribosomal protein S34, mitochondrial, partial [Crassostrea
gigas]
Length = 175
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
+K GR + F GK+L E+ LK GR++ R F+RYPE Y+ + V+ H GNL
Sbjct: 4 MKLFGRQSFFHGKSLMELTAQLKN-PKGRVVTRLAFERYPEKSYYILSHVEHGYHKGNLT 62
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLR--RTGKGEKK 120
+ VFRG P V+ I + K D+ LIPK EE+E+ + + K
Sbjct: 63 G--------YAWGTRVFRGYTFPGVRRI-DSGGKRDWHLIPKEEEEEFCKIDKVYKPNFT 113
Query: 121 IQYIDPWVDMPPLLKKVVARDLELEN 146
+ ID +PPL++ V+ R+L+ N
Sbjct: 114 PEKID--TQLPPLMEIVLKRNLKQRN 137
>gi|443689045|gb|ELT91549.1| hypothetical protein CAPTEDRAFT_223404 [Capitella teleta]
Length = 249
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 2 PIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHD 58
P+ YIGR T F GK L++IL LK +GVGR++YR F +RYPEP Y+ + KV P +D
Sbjct: 3 PVMYIGRETSFKGKRLFDILCRLKNFGVGRIVYRNTFHERYPEPSYYVVKKVFPNMND 60
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
N+ + + K + ++FRG E + + + +K D+RL+P+HEE+E+L R K
Sbjct: 130 NVLHMDKQLTKGTLVAQAIFRG--EDKGERVVRAGFKNDWRLVPRHEEEEFLSREHK-PL 186
Query: 120 KIQYIDPWVDMPPLLKKVVARDLE 143
+ + + PPL + + +D++
Sbjct: 187 PVNIVPKQCEFPPLFEHFLLKDMQ 210
>gi|358341523|dbj|GAA27554.2| hypothetical protein CLF_102630 [Clonorchis sinensis]
Length = 250
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 1 MP-IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQ-RFQRYPEPCYFKILKVQPVQH 57
MP I+Y+GR + + GK L EI+ NLK GVGR++ ++ RYPEPC++ + + P+
Sbjct: 1 MPRIQYVGRPSLHYYGKLLSEIVRNLKTRGVGRIVVKETEASRYPEPCFYVLERTVPLLS 60
Query: 58 DGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKG 117
D + N R + +FRG V + +++PD+RL+P E L R
Sbjct: 61 DSS------NVR-CRAWARRIFRGYDFGVV--LMRNTHEPDWRLVPTCEATALLNRAA-- 109
Query: 118 EKKIQYIDPWVDMPPLLKKVVA 139
DP P L K VA
Sbjct: 110 -------DPKNAAPKLTSKCVA 124
>gi|355709839|gb|EHH31303.1| hypothetical protein EGK_12350, partial [Macaca mulatta]
Length = 162
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++LG L +G+GRL+ R+ + ++ EPCY+++ +VQP NL+ H ++ +
Sbjct: 1 LFQLLGRLPLFGMGRLVTRKSWLWQHDEPCYWRLTRVQPDYTAQNLD--HGRAWGILTFK 58
Query: 76 ASVF--RGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPL 133
+ F G E E +E+ Y D+RL+PKHEE+ + T E + V PPL
Sbjct: 59 DTSFPSSGKTESEAREMEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPL 113
Query: 134 LKKVV 138
L+ ++
Sbjct: 114 LRAMI 118
>gi|383408757|gb|AFH27592.1| 28S ribosomal protein S34, mitochondrial [Macaca mulatta]
Length = 218
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++LG L +G+GRL+ R+ + ++ EPCY+++ +VQP NL++ +
Sbjct: 64 LFQLLGRLPLFGMGRLVTRKSWLWQHDEPCYWRLTRVQPDYTAQNLDHGR-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|402907265|ref|XP_003916398.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Papio anubis]
Length = 218
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++LG L +G+GRL+ R+ + ++ EPCY+++ +VQP NL++ +
Sbjct: 64 LFQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVQPDYTAQNLDHGK-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|432102545|gb|ELK30116.1| 28S ribosomal protein S34, mitochondrial [Myotis davidii]
Length = 468
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 19 EILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVAS 77
++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL +Y K +
Sbjct: 316 QLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNL-----DYGKAWGIL-- 368
Query: 78 VFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKV 137
F+G E E +EI T Y D+RL+PKHEE + T E ++ V PPLL+ +
Sbjct: 369 TFKGKTESEAREIEHTMYH-DWRLVPKHEEAAFTAFTPVPEDTLRS----VPYPPLLRAM 423
Query: 138 V 138
+
Sbjct: 424 I 424
>gi|383872408|ref|NP_001244544.1| 28S ribosomal protein S34, mitochondrial [Macaca mulatta]
gi|380790049|gb|AFE66900.1| 28S ribosomal protein S34, mitochondrial [Macaca mulatta]
gi|383408755|gb|AFH27591.1| 28S ribosomal protein S34, mitochondrial [Macaca mulatta]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++LG L +G+GRL+ R+ + ++ EPCY+++ +VQP NL++ +
Sbjct: 64 LFQLLGRLPLFGMGRLVTRKSWLWQHDEPCYWRLTRVQPDYTAQNLDHGR-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +E+ Y D+RL+PKHEE+ + T E + V PPLL+
Sbjct: 117 ILTFKGKTESEAREMEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|431906689|gb|ELK10810.1| 28S ribosomal protein S34, mitochondrial [Pteropus alecto]
Length = 218
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +GVGRL+ R+ + ++ EPCY+++ +V+P NL++ +
Sbjct: 64 LLQLLGRLPFFGVGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEQVMYH-DWRLVPKHEEETFTAFTPVSEDTFRS----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|449278946|gb|EMC86674.1| 28S ribosomal protein S34, mitochondrial, partial [Columba livia]
Length = 159
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQ---------------PVQHDGN 60
L+ +L L +GVGR + R+ + Y EPCY+ I KV+ P +H
Sbjct: 6 LFTLLCRLPQFGVGRTVTRKSWLWEYDEPCYWVITKVKADYFLESPRAPGLPSPRRHLHG 65
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
+N + FRG E EV+EI Y D+R++PKHEE+ + + T E+
Sbjct: 66 FLFSLQNMDHGRAWGYLTFRGKTEEEVREIDKVMYH-DWRMVPKHEEEAFKKFTPVPEET 124
Query: 121 IQYIDPWVDMPPLLKKVVARDLELENK--TPEP 151
IQY V PPLL+ ++ + E K T EP
Sbjct: 125 IQY----VPYPPLLRAMILARWQKEGKPITEEP 153
>gi|384948928|gb|AFI38069.1| 28S ribosomal protein S34, mitochondrial [Macaca mulatta]
Length = 218
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++LG L +G+GRL+ R+ + ++ EPCY+++ +VQP +L++ +
Sbjct: 64 LFQLLGRLPLFGMGRLVTRKSWLWQHDEPCYWRLTRVQPDYTAQHLDHGR-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|49522347|gb|AAH75342.1| MGC89027 protein [Xenopus (Silurana) tropicalis]
Length = 203
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 15 KTLWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMV 73
K L+ +L L+ +G+GR++ R+ + ++Y EPCY+ I KV+ ++ EN
Sbjct: 49 KRLFTLLTGLRSFGIGRVVTRKSWLEQYDEPCYWTITKVK-------VDYTAENMDHGKA 101
Query: 74 YVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE-KKIQYIDPWVDMPP 132
+ FRG E EV+EI Y D+R++P+HEE+ + T E + ++Y V PP
Sbjct: 102 WGYLTFRGKPENEVKEIPKVMYH-DWRIVPRHEEENFKSFTPVPEPEPVRY----VPYPP 156
Query: 133 LLKKVVARDLELENK 147
L++ ++ ++ E K
Sbjct: 157 LMRAMILAQMQKEGK 171
>gi|348041387|ref|NP_001004910.2| 28S ribosomal protein S34, mitochondrial [Xenopus (Silurana)
tropicalis]
Length = 215
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 15 KTLWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMV 73
K L+ +L L+ +G+GR++ R+ + ++Y EPCY+ I KV+ ++ EN
Sbjct: 61 KRLFTLLTGLRSFGIGRVVTRKSWLEQYDEPCYWTITKVK-------VDYTAENMDHGKA 113
Query: 74 YVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE-KKIQYIDPWVDMPP 132
+ FRG E EV+EI Y D+R++P+HEE+ + T E + ++Y V PP
Sbjct: 114 WGYLTFRGKPENEVKEIPKVMYH-DWRIVPRHEEENFKSFTPVPEPEPVRY----VPYPP 168
Query: 133 LLKKVVARDLELENK 147
L++ ++ ++ E K
Sbjct: 169 LMRAMILAQMQKEGK 183
>gi|351711309|gb|EHB14228.1| 28S ribosomal protein S34, mitochondrial [Heterocephalus glaber]
Length = 224
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H V+ +
Sbjct: 64 LLQLLSCLPRFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGVLTFK 121
Query: 76 A-SVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLL 134
A S+ G E EV+EI T + D+RL+PKHEE+ + T E ++ V PPLL
Sbjct: 122 ALSLSTGKTESEVREIEHTMHH-DWRLVPKHEEETFTIFTPGPEDDLRP----VPYPPLL 176
Query: 135 KKVV 138
+ ++
Sbjct: 177 RAMI 180
>gi|157786590|ref|NP_001099241.1| 28S ribosomal protein S34, mitochondrial [Rattus norvegicus]
gi|149052072|gb|EDM03889.1| mitochondrial ribosomal protein S34 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 218
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWGILTFKGKSEE 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
+EI Y D+RL+PKHEE+ + TGK E ++ V PPLL+ ++
Sbjct: 127 TAREIEQVMYH-DWRLVPKHEEEAFTAFTGKAEDRLNL----VPYPPLLRAMI 174
>gi|403273260|ref|XP_003928438.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Saimiri
boliviensis boliviensis]
Length = 218
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +VQP NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVQPDHTAQNLDHGR-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV--ARDLE 143
E +EI Y D+RL+PKHEE+ + T E + P V PPLL+ ++ R
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSV----PSVPYPPLLRAMILAERQKN 181
Query: 144 LENKTPEP--NSFRMKV 158
+ T EP N R++V
Sbjct: 182 GDTSTEEPMLNMQRIRV 198
>gi|226844951|gb|AAH85462.2| Mrps34 protein [Danio rerio]
Length = 220
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G+GRL R+ + + EPCY+KI KV+ ++ EN +
Sbjct: 63 LFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVK-------VDYTAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
FRG EP+ +E+ Y D+RL+PKHEE+E+ R E + V PPLL+
Sbjct: 116 VLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEFRRCEPVPEPAARS----VRYPPLLR 170
Query: 136 KVV----ARDLELENKT-PEP 151
++ A++ +E T PEP
Sbjct: 171 AMILAQQAKEQGVEVSTLPEP 191
>gi|156713426|ref|NP_001007377.2| mitochondrial ribosomal protein S34 [Danio rerio]
Length = 220
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G+GRL R+ + + EPCY+KI KV+ ++ EN +
Sbjct: 63 LFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVK-------VDYTAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
FRG EP+ +E+ Y D+RL+PKHEE+E+ R E + V PPLL+
Sbjct: 116 VLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEFRRCEPVPEPAARS----VRYPPLLR 170
Query: 136 KVV----ARDLELENKT-PEP 151
++ A++ +E T PEP
Sbjct: 171 AMILAQQAKEQGVEVSTLPEP 191
>gi|157423055|gb|AAI53566.1| Mitochondrial ribosomal protein S34 [Danio rerio]
Length = 220
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G+GRL R+ + + EPCY+KI KV+ ++ EN +
Sbjct: 63 LFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVK-------VDYTAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
FRG EP+ +E+ Y D+RL+PKHEE+E+ R E + V PPLL+
Sbjct: 116 VLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEFRRCEPVPEPAARS----VRYPPLLR 170
Query: 136 KVV----ARDLELENKT-PEP 151
++ A++ +E T PEP
Sbjct: 171 AMILAQQAKEQGVEVSTLPEP 191
>gi|354478675|ref|XP_003501540.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like
[Cricetulus griseus]
gi|344248322|gb|EGW04426.1| 28S ribosomal protein S34, mitochondrial [Cricetulus griseus]
Length = 218
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NL++ +
Sbjct: 64 LFQLLARLPVFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E + +EI Y D+RL+PKHEE+ + T K E ++P V PPLL+
Sbjct: 117 ILTFKGKTEDKAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDG---LNP-VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|417397299|gb|JAA45683.1| Putative 28s ribosomal protein s34 mitochondrial [Desmodus
rotundus]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +GVGRL+ R+ + ++ +PCY+++ +V+P NL++ +
Sbjct: 64 LLQLLGRLPFFGVGRLVTRKSWLWQHDQPCYWRLTRVRPDYTAQNLDHGK-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+P+HEE+ + T G + Q P+ PPLL+
Sbjct: 117 ILTFKGKTEGEPREIEQVMYH-DWRLVPRHEEEAFTAFT-PGPEDTQLSVPY---PPLLR 171
Query: 136 KVV--ARDLELENKTPEP 151
++ R +N T EP
Sbjct: 172 AMILAERQKNGDNSTEEP 189
>gi|147906013|ref|NP_001080771.1| mitochondrial ribosomal protein S34 [Xenopus laevis]
gi|28302183|gb|AAH46672.1| Mrps34-prov protein [Xenopus laevis]
Length = 215
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L L+ +G+ R++ R+ + + Y EPCY+ I KV+ ++ EN +
Sbjct: 63 LFTLLTGLRSFGISRMVTRKSWLELYDEPCYWTITKVK-------VDYTAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE-KKIQYIDPWVDMPPLL 134
FRG E EV+EI Y D+RL+P+HEE+ + R T + + ++Y V PPL+
Sbjct: 116 YLTFRGKPENEVKEIPKVMYH-DWRLVPRHEEENFKRFTPVPDPEPVRY----VPYPPLM 170
Query: 135 KKVVARDLELENK 147
+ ++ ++ E K
Sbjct: 171 RAMILAQMQKEGK 183
>gi|296473509|tpg|DAA15624.1| TPA: 28S ribosomal protein S34, mitochondrial [Bos taurus]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL++ +
Sbjct: 64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI + D+RL+PKHEE + T E+K + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEEKPRP----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|355704471|gb|AES02238.1| mitochondrial ribosomal protein S34 [Mustela putorius furo]
Length = 216
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 16 TLWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
+L ++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NLE+ +
Sbjct: 63 SLMQLLSRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLEHGK-------AW 115
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEE 107
F+G E E +EI Y D+RL+PKHEE
Sbjct: 116 GVLTFKGRTESEAREIGQVMYH-DWRLVPKHEE 147
>gi|296219280|ref|XP_002755806.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Callithrix
jacchus]
Length = 218
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDHTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E + P V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSL----PAVPYPPLLRAMI 174
>gi|148690434|gb|EDL22381.1| mitochondrial ribosomal protein S34, isoform CRA_a [Mus musculus]
Length = 229
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 85 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWGILTFKGKSED 137
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
+EI Y D+RL+PKHEE+ + T K E ++ V PPLL+ ++
Sbjct: 138 TAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNS----VPYPPLLRAMI 185
>gi|440913417|gb|ELR62867.1| 28S ribosomal protein S34, mitochondrial, partial [Bos grunniens
mutus]
Length = 200
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 14/128 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++ +
Sbjct: 37 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILTFK 94
Query: 76 ASVFRGVLEP-----EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDM 130
A V G+L P E +EI + D+RL+PKHEE+ + T E+ + V
Sbjct: 95 ARV-PGLLSPGKTESEAREIEQVMHH-DWRLVPKHEEEAFTSFTPAPEETPRP----VPY 148
Query: 131 PPLLKKVV 138
PPLL+ ++
Sbjct: 149 PPLLRAMI 156
>gi|395835982|ref|XP_003790949.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Otolemur
garnettii]
Length = 218
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E ++ V PPLL+ ++
Sbjct: 127 EAREIEQAMYH-DWRLVPKHEEEAFTAFTLVSEDSLRS----VPYPPLLRAII 174
>gi|12840821|dbj|BAB24970.1| unnamed protein product [Mus musculus]
Length = 218
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWGILTFKGKSED 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
+EI Y D+RL+PKHEE+ + T K E ++ V PPLL+ ++
Sbjct: 127 TAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNS----VPYPPLLRAMI 174
>gi|13385670|ref|NP_075749.1| 28S ribosomal protein S34, mitochondrial [Mus musculus]
gi|24212385|sp|Q9JIK9.1|RT34_MOUSE RecName: Full=28S ribosomal protein S34, mitochondrial;
Short=MRP-S34; Short=S34mt; AltName: Full=T-complex
expressed gene 2 protein
gi|7769617|gb|AAF69478.1|AF220294_1 TCE2 [Mus musculus]
gi|12832157|dbj|BAB21988.1| unnamed protein product [Mus musculus]
gi|12835073|dbj|BAB23142.1| unnamed protein product [Mus musculus]
gi|19353869|gb|AAH24336.1| Mitochondrial ribosomal protein S34 [Mus musculus]
Length = 218
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWGILTFKGKSED 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
+EI Y D+RL+PKHEE+ + T K E ++ V PPLL+ ++
Sbjct: 127 TAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNS----VPYPPLLRAMI 174
>gi|78369448|ref|NP_001030577.1| 28S ribosomal protein S34, mitochondrial [Bos taurus]
gi|108935902|sp|P82929.2|RT34_BOVIN RecName: Full=28S ribosomal protein S34, mitochondrial;
Short=MRP-S34; Short=S34mt
gi|74268021|gb|AAI02290.1| Mitochondrial ribosomal protein S34 [Bos taurus]
Length = 218
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL++ +
Sbjct: 64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWG 116
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI + D+RL+PKHEE + T E+ + V PPLL+
Sbjct: 117 ILTFKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEETPRP----VPYPPLLR 171
Query: 136 KVV 138
++
Sbjct: 172 AMI 174
>gi|170584399|ref|XP_001896988.1| UTP--ammonia ligase [Brugia malayi]
gi|158595627|gb|EDP34167.1| UTP--ammonia ligase, putative [Brugia malayi]
Length = 925
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHDG 59
I+YIG + GK LWEIL L+ G+GR++ + + R +P +P Y KI++ P
Sbjct: 5 IRYIGNYDINAEGKFLWEILCQLRNLGIGRIVTKNEWARKWPKQPSYLKIVQACPSMDRW 64
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLR 112
L ++ FRG+ + E A + D+RLI KHEE E+++
Sbjct: 65 LLRGK--------LWADWTFRGI-NLGLYEFSADLARSDWRLIHKHEEDEFMK 108
>gi|312085593|ref|XP_003144740.1| hypothetical protein LOAG_09164 [Loa loa]
gi|307760095|gb|EFO19329.1| hypothetical protein LOAG_09164 [Loa loa]
Length = 255
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHDG 59
I+YIG + GK LWEIL L+ GVGR++ + + R +P +P Y KI++ P
Sbjct: 5 IRYIGNYDINAEGKFLWEILCQLRNLGVGRIVTKNEWGRKWPKQPSYLKIVQACPSMDRW 64
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEK 119
L + ++ +RG+ + E + D+RLI KHEE E++ + K
Sbjct: 65 LL--------RGKLWADWTYRGI-NLGLYEFSTDLARSDWRLIHKHEEDEFM-KCDNPMK 114
Query: 120 KIQYIDPWVDMPPLLKKVV 138
I+Y + +PP L+ V
Sbjct: 115 PIEYPKT-MPLPPYLRAVC 132
>gi|224069396|ref|XP_002190483.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Taeniopygia
guttata]
Length = 212
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 20 ILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASV 78
+L L +GVGR + R+ + + EPCY+ I KV+ ++ EN +
Sbjct: 66 LLCRLPRFGVGRTVTRKSWLWAHHEPCYWVITKVK-------VDYMAENMDHGRAWGYLT 118
Query: 79 FRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
F+G E EV+EI Y D+R++PKHEE+ + + T E ++++ PPLL+ ++
Sbjct: 119 FKGKTEEEVREIDKAMYH-DWRMVPKHEEEAFKKFTAVPEVTVRFL----PYPPLLRAII 173
Query: 139 ARDLELENK 147
+ E +
Sbjct: 174 LAQWQKEGR 182
>gi|297697766|ref|XP_002826014.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Pongo abelii]
Length = 218
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E + V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLRAMI 174
>gi|13027604|ref|NP_076425.1| 28S ribosomal protein S34, mitochondrial [Homo sapiens]
gi|114660325|ref|XP_001160122.1| PREDICTED: 28S ribosomal protein S34, mitochondrial isoform 2 [Pan
troglodytes]
gi|397472231|ref|XP_003807658.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Pan paniscus]
gi|24212369|sp|P82930.2|RT34_HUMAN RecName: Full=28S ribosomal protein S34, mitochondrial;
Short=MRP-S34; Short=S34mt
gi|12654687|gb|AAH01182.1| Mitochondrial ribosomal protein S34 [Homo sapiens]
gi|119606034|gb|EAW85628.1| mitochondrial ribosomal protein S34, isoform CRA_b [Homo sapiens]
gi|261858726|dbj|BAI45885.1| mitochondrial ribosomal protein S34 [synthetic construct]
gi|325463829|gb|ADZ15685.1| mitochondrial ribosomal protein S34 [synthetic construct]
Length = 218
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E + V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLRAMI 174
>gi|426380709|ref|XP_004057004.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Gorilla
gorilla gorilla]
Length = 218
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTET 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E + V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLRAMI 174
>gi|134254684|gb|ABO65072.1| mitochondrial 28S ribosomal protein S34 [Homo sapiens]
Length = 176
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFR--GVL 83
+G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++ + + F G
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILTFKDASFSSSGKT 131
Query: 84 EPEVQEIFATSYKPDYRLIPKHEEQEW--LRRTGK 116
E E +EI Y D+RL+PKHEE+ + LRR G+
Sbjct: 132 ESEAREIEHVMYH-DWRLVPKHEEEAFTXLRRAGR 165
>gi|410308720|gb|JAA32960.1| mitochondrial ribosomal protein S34 [Pan troglodytes]
Length = 218
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T + + P V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPKDSL----PSVPYPPLLRAMI 174
>gi|260822141|ref|XP_002606461.1| hypothetical protein BRAFLDRAFT_226282 [Branchiostoma floridae]
gi|229291803|gb|EEN62471.1| hypothetical protein BRAFLDRAFT_226282 [Branchiostoma floridae]
Length = 146
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 15 KTLWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMV 73
K L+E+L + +GVG+L+ R +Q RYPEPC++++ +V P + EN
Sbjct: 4 KRLFEVLRDEADWGVGKLVTRVLWQTRYPEPCFWRLTRVAP-------DELAENRDFGEA 56
Query: 74 YVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLR----RTGKGEKKIQYIDPWVD 129
+ +RG+ E ++I + + ++P +E+E+ T E+K+ Y P
Sbjct: 57 WGIRTWRGIYENAERQILDANTTHGWWIVPPEKEEEFCTIPEDSTYAEERKVPYEVP--- 113
Query: 130 MPPLLKKVVARDLE 143
+PPLL+ ++ + E
Sbjct: 114 VPPLLRAMILAERE 127
>gi|344292222|ref|XP_003417827.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Loxodonta
africana]
Length = 218
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P +L++ + FRG E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQSLDHGK-------AWGVLTFRGQTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARD 141
E +EI Y D+RL+PKHEE + T E + V PPLL+ ++ D
Sbjct: 127 ETREIEQVMYH-DWRLVPKHEEAAFTTFTPASEDLRRS----VPYPPLLRAMILAD 177
>gi|332240016|ref|XP_003269186.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S34,
mitochondrial [Nomascus leucogenys]
Length = 218
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T E + V PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAP----VPYPPLLRAMI 174
>gi|348585497|ref|XP_003478508.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like isoform 1
[Cavia porcellus]
Length = 218
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVLPDHTAQNLDH-------GKAWGVLTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARD 141
E +EI + D+R++PKHEE+ + T E ++ V PPLL+ ++ D
Sbjct: 127 EAREIQHVMHH-DWRVVPKHEEEAFTSFTPGPEDDLRS----VPYPPLLRAMILAD 177
>gi|359319743|ref|XP_003639160.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Canis
lupus familiaris]
Length = 216
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + R+ EPCY+++ +V+P +LE+ + FRG E
Sbjct: 74 FGLGRLVTRKSWLWRHDEPCYWRLTRVRPDYTAQDLEH-------GRAWGVLTFRGRTEG 126
Query: 86 EVQEIFATSYKPDYRLIPKHEE 107
E +E+ Y D+RL+PKHEE
Sbjct: 127 EPREVAQAMYH-DWRLVPKHEE 147
>gi|410985559|ref|XP_003999088.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Felis catus]
Length = 220
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NLE+ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLEH-------GKAWGILTFKGHTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI + D+RL+PKHEE + T + Q P+ PPLL+ ++
Sbjct: 127 EAREIAQVMHH-DWRLVPKHEEAAFTAVTPAPPEDAQCRVPY---PPLLRAMI 175
>gi|348585499|ref|XP_003478509.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like isoform 2
[Cavia porcellus]
Length = 224
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFR-GVLE 84
+G+GRL+ R+ + ++ EPCY+++ +V P NL+ H V+ + A G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVLPDHTAQNLD--HGKAWGVLTFKALFLSSGKTE 131
Query: 85 PEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARD 141
E +EI + D+R++PKHEE+ + T E ++ V PPLL+ ++ D
Sbjct: 132 SEAREIQHVMHH-DWRVVPKHEEEAFTSFTPGPEDDLRS----VPYPPLLRAMILAD 183
>gi|17554282|ref|NP_497919.1| Protein MRPS-34 [Caenorhabditis elegans]
gi|5824553|emb|CAA84334.2| Protein MRPS-34 [Caenorhabditis elegans]
Length = 228
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHD 58
I+++G D A GK L+EIL L+ +GVGRL+ + + R +P P Y KIL+ +P
Sbjct: 6 IRFVG-NHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEPGMDR 64
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRT 114
E VY VFRG V E + D++L+ KH+E+ + T
Sbjct: 65 WLFEG--------KVYAEWVFRGK-NLGVYEFSKDLNRSDWQLVHKHQEKSYTSST 111
>gi|348605272|ref|NP_001231761.1| mitochondrial ribosomal protein S34 [Sus scrofa]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYAAENLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQ 108
E +EI Y D+RL+PKHEE+
Sbjct: 127 EAREIEQVMYH-DWRLVPKHEEE 148
>gi|410334907|gb|JAA36400.1| mitochondrial ribosomal protein S34 [Pan troglodytes]
Length = 225
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVF--RGVL 83
+G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++ + + F G
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILTFKDASFPSSGKT 131
Query: 84 EPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E E +EI Y D+RL+PKHEE+ + T K + P+ PPLL+ ++
Sbjct: 132 ESEAREIEHVMYH-DWRLVPKHEEEAFTAFT-PARKDTRASVPY---PPLLRAMI 181
>gi|410334905|gb|JAA36399.1| mitochondrial ribosomal protein S34 [Pan troglodytes]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
E +EI Y D+RL+PKHEE+ + T K + P+ PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFT-PARKDTRASVPY---PPLLRAMI 174
>gi|118098326|ref|XP_424592.2| PREDICTED: uncharacterized protein LOC426987 [Gallus gallus]
Length = 210
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L +GVGR++ R+ + + EPCY+ I KV+ +++ +
Sbjct: 63 LFSLLCRQPLFGVGRMVTRKSWLWAHDEPCYWVITKVRADYTAEGMDHGR-------AWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
FRG E E +EI Y D+R++PKHEE+ + + T E+ +Y+ PPLL+
Sbjct: 116 RLTFRGETEAEDREIDKVMYH-DWRMVPKHEEEAFKKFTPVPEETCRYL----PYPPLLR 170
Query: 136 KVVARDLELENK--TPEP 151
++ + E K T EP
Sbjct: 171 AMILAQWQKEGKEITEEP 188
>gi|341896015|gb|EGT51950.1| hypothetical protein CAEBREN_04842 [Caenorhabditis brenneri]
Length = 228
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHD 58
I+++G D A GK L+EIL L+ +GVGRL+ + + R +P P Y KIL+ +P
Sbjct: 6 IRFVG-NHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEPGMDR 64
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEW 110
E VY VFRG V E + D++LI KH+E+ +
Sbjct: 65 WLFEG--------KVYAEWVFRGK-NLGVYEFSKDLNRSDWQLIHKHQEKSY 107
>gi|126335478|ref|XP_001365036.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like
[Monodelphis domestica]
Length = 213
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
+G+GRL+ R+ + ++ EPCY+++ +V+ NL++ + F+G E
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRADYTAPNLDHGK-------AWGILTFQGKTES 126
Query: 86 EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
+ +EI Y D+RL+PKHEE+ + K E+ +Y V PPLL+ ++
Sbjct: 127 QEKEIDQVMYH-DWRLVPKHEEEAFKNFIPKSEETNRY----VPYPPLLRAMI 174
>gi|224587166|gb|ACN58617.1| Mitochondrial 28S ribosomal protein S34 [Salmo salar]
Length = 179
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPE-PCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
L+ +L L+ +GVG L R+ + +PE P Y+++ KV+ ++ EN +
Sbjct: 22 LFSLLSGLRMFGVGHLFTRKSWLTEHPEAPSYWQVTKVK-------VDYTAENMDHGRAW 74
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLL 134
++G E E +EI Y D+RL+PKHEE+++ E I+Y V PPLL
Sbjct: 75 GVLTYKGKQESEAKEIDKVMYH-DWRLVPKHEEEQFKLYNPVPEPPIRY----VSYPPLL 129
Query: 135 KKVV 138
+ ++
Sbjct: 130 RAML 133
>gi|308487482|ref|XP_003105936.1| hypothetical protein CRE_20252 [Caenorhabditis remanei]
gi|308254510|gb|EFO98462.1| hypothetical protein CRE_20252 [Caenorhabditis remanei]
Length = 228
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHD 58
I+++G D A GK L+EIL L+ +GVGRL+ + + R +P P Y KIL+ +P
Sbjct: 6 IRFVG-NHDIASEGKFLFEILSQLRNFGVGRLVTKNEWARKWPNNPSYMKILRAEPGMDR 64
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEW 110
E +Y VFRG V E + D++L+ KH+E+ +
Sbjct: 65 WLFEGK--------IYAEWVFRGK-NLGVYEFSKDLNRSDWQLVHKHQEKSY 107
>gi|268574256|ref|XP_002642105.1| Hypothetical protein CBG18046 [Caenorhabditis briggsae]
Length = 227
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHD 58
I+++G D A GK L+EIL L+ +GVGRL+ + + R +P P Y KIL+ +P
Sbjct: 6 IRFVG-NHDIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEPGMDR 64
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQ 108
E VY VFRG V E + D++L+ KH+E
Sbjct: 65 WLFEG--------KVYAEWVFRGK-NLGVYEFSKDLNRSDWQLVHKHQEN 105
>gi|221221986|gb|ACM09654.1| Mitochondrial 28S ribosomal protein S34 [Salmo salar]
Length = 220
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPE-PCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
L+ +L L+ +GVG L R+ + +PE P Y+++ KV+ ++ EN +
Sbjct: 63 LFSLLSGLRMFGVGHLFTRKSWLTEHPEAPSYWQVTKVK-------VDYTAENMDHGRAW 115
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLL 134
++G E E +EI Y D+RL+PKHEE+++ E I+Y V PPLL
Sbjct: 116 GVLTYKGKQESEAKEIDKVMYH-DWRLVPKHEEEQFKLYNPVPEPPIRY----VSYPPLL 170
Query: 135 KKVV 138
+ ++
Sbjct: 171 RAML 174
>gi|209733552|gb|ACI67645.1| Mitochondrial 28S ribosomal protein S34 [Salmo salar]
gi|303662431|gb|ADM16075.1| Mitochondrial 28S ribosomal protein S34 [Salmo salar]
Length = 220
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPE-PCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
L+ +L L+ +GVG L R+ + +PE P Y+++ KV+ ++ EN +
Sbjct: 63 LFSLLSGLRMFGVGHLFTRKSWLTEHPEAPSYWQVTKVK-------VDYTAENMDHGRAW 115
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLL 134
++G E E +EI Y D+RL+PKHEE+++ E I+Y V PPLL
Sbjct: 116 GVLTYKGKQESEAKEIDKVMYH-DWRLVPKHEEEQFKLYNPVPEPPIRY----VSYPPLL 170
Query: 135 KKVV 138
+ ++
Sbjct: 171 RAML 174
>gi|221220542|gb|ACM08932.1| Mitochondrial 28S ribosomal protein S34 [Salmo salar]
Length = 220
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPE-PCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
L+ +L L+ +GVG L R+ + +PE P Y+++ KV+ ++ EN +
Sbjct: 63 LFSLLSGLRMFGVGHLFTRKSWLTEHPEAPSYWQVTKVK-------VDYTAENMDHGRAW 115
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLL 134
++G E E +EI Y D+RL+PKHEE+++ E I+Y V PPLL
Sbjct: 116 GVLTYKGKQESEAKEIDKVMYH-DWRLVPKHEEEQFKLYNPVPEPPIRY----VSYPPLL 170
Query: 135 KKVV 138
+ ++
Sbjct: 171 RAML 174
>gi|47219605|emb|CAG02650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G GRL R+ + + + EP Y+ I KV+ ++ EN +
Sbjct: 63 LFSLLAGMRMFGTGRLFTRKSWLEEHTEPSYWHITKVK-------VDYTAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQE 109
++G + EV+E+ Y D+RLIPKH EQ+
Sbjct: 116 ILTYKGKTQSEVKEVDQVMYH-DWRLIPKHMEQQ 148
>gi|348533077|ref|XP_003454032.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like
[Oreochromis niloticus]
Length = 219
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +GVGRL R+ + + + EP Y++I KV+ ++ EN +
Sbjct: 63 LFSLLAGMRLFGVGRLFTRKSWLEDHSEPSYWQITKVK-------VDYTSENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
++G E EV+E+ Y D+RLIPK EQ++ E ++Y V PPLL+
Sbjct: 116 ILTYKGKKESEVKEVDKVMYH-DWRLIPKDTEQQFKDFEPLPEPPVRY----VAYPPLLR 170
Query: 136 KVV 138
++
Sbjct: 171 AML 173
>gi|349803627|gb|AEQ17286.1| putative mitochondrial ribosomal protein s34 [Pipa carvalhoi]
Length = 125
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 31/132 (23%)
Query: 20 ILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVF 79
+L L+ +G+GR++ R + Y EPCY+ I KV+ ++ EN + F
Sbjct: 3 LLAGLRLFGIGRMVTRPWLEVYDEPCYWTITKVK-------IDYTAENMDHGKAWGYLTF 55
Query: 80 RGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVA 139
RG E EV+EI Y E E +R +V PPL++ ++
Sbjct: 56 RGKEENEVKEISKVMYP----------EPETIR--------------YVPYPPLMRAMIL 91
Query: 140 RDLELENKTPEP 151
++ E K PEP
Sbjct: 92 AQMQKEGKPPEP 103
>gi|76155196|gb|AAX26449.2| SJCHGC07966 protein [Schistosoma japonicum]
Length = 218
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYR-QRFQRYPEPCYFKILKVQPVQHDGN 60
I+YIGR + F GK L EI NLK GR++ + ++ EPCY+ + V P+ D
Sbjct: 4 IEYIGRPSLHFYGKLLSEIARNLKNRAKGRVVIKVTESAKFKEPCYYILENVVPLMSD-- 61
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE 118
++ + + +FRG + +++PD+RL+ E + + + K +
Sbjct: 62 -----QSGVRCRAWGRRIFRG--RNLGCSLLPNTHEPDWRLLSPSEAEHLMSLSTKAD 112
>gi|226478816|emb|CAX72903.1| MAP/microtubule affinity-regulating kinase 3 [Schistosoma
japonicum]
Length = 247
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYR-QRFQRYPEPCYFKILKVQPVQHDGN 60
I+YIGR + F GK L EI NLK GR++ + ++ EPCY+ + V P+ D
Sbjct: 4 IEYIGRPSLHFYGKLLSEIARNLKNRAKGRVVIKVTESAKFKEPCYYILENVIPLMSD-- 61
Query: 61 LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
++ + + +FRG + +++PD+RL+ E + + + K +
Sbjct: 62 -----QSGVRCRAWGRRIFRG--RNLGCSLLPNTHEPDWRLLSPSEAEHLMSLSTKADMI 114
Query: 121 IQY--IDPWVDMPPLLKKVVAR 140
++ PPLL + R
Sbjct: 115 APDVPVNCLAQAPPLLTIFLRR 136
>gi|432869980|ref|XP_004071778.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Oryzias
latipes]
Length = 238
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +GVGR+ R+ + + + EP +++I KV+ ++ EN +
Sbjct: 83 LFSLLAGMRLFGVGRMFTRKSWLEDHNEPSFWQITKVK-------VDYTAENMDHGKAWG 135
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEW 110
++G E E++E+ Y D+RLIPKH EQ++
Sbjct: 136 VLTYKGKKESEMKEVDKVMYH-DWRLIPKHMEQQF 169
>gi|410902039|ref|XP_003964502.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Takifugu
rubripes]
Length = 219
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G+GRL R+ + + + EP Y++I KV+ ++ EN +
Sbjct: 63 LFSLLAGMRMFGIGRLFTRKSWLEDHTEPSYWQITKVK-------VDYMAENMDHGKAWG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQE 109
++G E E +E+ Y D+RLIPKH EQ+
Sbjct: 116 ILTYKGKTEIEEKEVDKVMYH-DWRLIPKHMEQQ 148
>gi|256084658|ref|XP_002578544.1| hypothetical protein [Schistosoma mansoni]
gi|353228681|emb|CCD74852.1| hypothetical protein Smp_073690.2 [Schistosoma mansoni]
Length = 235
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 1 MP-IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQ-RFQRYPEPCYFKILKVQPVQH 57
MP I+YIGR + F GK L EI NLK GR++ ++ ++ EPCY+ + V P+
Sbjct: 1 MPKIEYIGRPSLHFYGKLLSEIAKNLKNRAKGRVVIKETETAKFKEPCYYILKSVVPLMS 60
Query: 58 DGNLENPHENYRKVMVYVASVFRG-----VLEPEVQEIFATSYKPDYRLIPKHEEQEWLR 112
D + + + VFRG L P E PD+RL+ E +
Sbjct: 61 D-------KTDVRCRAWGIRVFRGRNLGYCLLPNTHE-------PDWRLLSPSEAERLTS 106
Query: 113 RTGKGE 118
+ K +
Sbjct: 107 MSTKTD 112
>gi|115610822|ref|XP_001178245.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 178
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 13 AGKTLWEILGNLKGYGVGRLLYRQRFQRY--PEPCYFKILKVQPVQHDGNLENPHENYRK 70
GK+L+++L L +GVGR++ R R+Q + +P Y +I +V+ ++ N +
Sbjct: 10 TGKSLFDLLNQLPNFGVGRIVTRTRWQHWRPDQPSYIRITRVK-------VDCESLNLGQ 62
Query: 71 VMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDM 130
+ RG ++ +K +++LI K EE E+ K E+ + V M
Sbjct: 63 GEAWGIPTMRGYSRDGMEIKVGAWWKREWKLIRKSEEDEFCAYQPK-EEDFHQVPNKVAM 121
Query: 131 PPLLKKVV 138
PPLL ++
Sbjct: 122 PPLLAAML 129
>gi|256084660|ref|XP_002578545.1| hypothetical protein [Schistosoma mansoni]
gi|353228682|emb|CCD74853.1| hypothetical protein Smp_073690.1 [Schistosoma mansoni]
Length = 247
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 1 MP-IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQ-RFQRYPEPCYFKILKVQPVQH 57
MP I+YIGR + F GK L EI NLK GR++ ++ ++ EPCY+ + V P+
Sbjct: 1 MPKIEYIGRPSLHFYGKLLSEIAKNLKNRAKGRVVIKETETAKFKEPCYYILKSVVPLMS 60
Query: 58 DGNLENPHENYRKVMVYVASVFRG-----VLEPEVQEIFATSYKPDYRLIPKHEEQEWLR 112
D + + + VFRG L P E PD+RL+ E +
Sbjct: 61 D-------KTDVRCRAWGIRVFRGRNLGYCLLPNTHE-------PDWRLLSPSEAERLTS 106
Query: 113 RTGKGE 118
+ K +
Sbjct: 107 MSTKTD 112
>gi|291230621|ref|XP_002735264.1| PREDICTED: mitochondrial ribosomal protein S34-like [Saccoglossus
kowalevskii]
Length = 192
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 12 FAGKTLWEILGNLKGYGVGRLLYRQRFQ-RYP-EPCYFKILKVQPVQHDGNLENPHENYR 69
F G L+ + +G+GR+ RQR+ YP EP YF+I +V+ ++ ++
Sbjct: 29 FTGNNLFNVCMKCPKFGIGRIATRQRWTLLYPNEPSYFQITRVK-------IDPSRKDLD 81
Query: 70 KVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVD 129
++ +RG E +++ +++K ++ LI K +E+E+ + +
Sbjct: 82 GGKIWGVKTWRG-YRIEEEKLITSAFKKEWILIRKSDEKEFCEFQSDPLRDFAVVPSHRP 140
Query: 130 MPPLLKKVVARDLELEN 146
+PPLLK +V + + N
Sbjct: 141 LPPLLKAMVLQQYDNRN 157
>gi|119606033|gb|EAW85627.1| mitochondrial ribosomal protein S34, isoform CRA_a [Homo sapiens]
Length = 248
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 29/136 (21%)
Query: 27 YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHE------------------- 66
+G+GRL+ R+ + ++ EPCY+++ +V+P NL++
Sbjct: 74 FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGKAWGILTFKGKARESGCPAVR 133
Query: 67 ----NYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
++V + G E E +EI Y D+RL+PKHEE+ + T E +
Sbjct: 134 CRPPTAQQVCADASFSSSGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLA 192
Query: 123 YIDPWVDMPPLLKKVV 138
V PPLL+ ++
Sbjct: 193 S----VPYPPLLRAMI 204
>gi|225715016|gb|ACO13354.1| Mitochondrial 28S ribosomal protein S34 [Esox lucius]
Length = 220
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 24/129 (18%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYP-EPCYFKILKVQPVQHDGNLENPHENYRKVMVY 74
L+ +L L+ +GVGRL R+ + +P P Y+++ KV+ ++ EN +
Sbjct: 63 LFSLLSGLRLFGVGRLFTRKSWLTEHPGAPSYWQVTKVK-------VDYTAENMDHGRAW 115
Query: 75 VASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDP-----WVD 129
+G EV+EI Y D+RL+PKHEE ++ K+ Y P +V
Sbjct: 116 GILTHKGKQVSEVKEIDKVMYH-DWRLVPKHEEVQF---------KLYYPVPETPTRYVS 165
Query: 130 MPPLLKKVV 138
PPLL+ ++
Sbjct: 166 YPPLLRAMI 174
>gi|339239035|ref|XP_003381072.1| conserved hypothetical protein [Trichinella spiralis]
gi|316975940|gb|EFV59312.1| conserved hypothetical protein [Trichinella spiralis]
Length = 196
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 3 IKYIGRTTDFA-GKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQPVQHDG 59
+K+IG A GK L+EIL L+ +GV R++ + + R +P EP Y I KV+P + D
Sbjct: 1 MKFIGNYDILAEGKFLFEILAQLRNFGVERMVTKGEWMRKWPNEPSYCVIRKVEP-EMDR 59
Query: 60 NLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQ 108
L + V+V +FRG + + + D+ LI KHEE
Sbjct: 60 WLS-------RGKVWVDWIFRGK-ALGIYQFSKELNRCDWHLIHKHEEH 100
>gi|198429022|ref|XP_002128788.1| PREDICTED: similar to Mitochondrial ribosomal protein S34 [Ciona
intestinalis]
Length = 193
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 8 RTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHEN 67
RT + K L++IL L +GVGRL + P +++I +V +L++P+
Sbjct: 36 RTRNKEEKKLFQILSQLPSWGVGRLFTTCDDIIHSAPTFWRITRVH-----ADLKSPNME 90
Query: 68 YRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPW 127
Y + + G E +EI + +RLIP+HEE+ +L + + Q + +
Sbjct: 91 YG--IAWGIKTLNGRNEGYEKEI-QDGNENLWRLIPRHEEESYLEYEPQSAETHQ-VPLY 146
Query: 128 VDMPPLLKKVVARD 141
V MPPL+ + +++
Sbjct: 147 VPMPPLMAMLESQN 160
>gi|326929447|ref|XP_003210875.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S34,
mitochondrial-like [Meleagris gallopavo]
Length = 202
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 41 YPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYR 100
+ EPCY+ I KV+ +++ + FRG E E +EI Y D+R
Sbjct: 80 HDEPCYWVITKVRADYTAEGMDHGR-------AWGRLTFRGKTEEEDREIDKVMYH-DWR 131
Query: 101 LIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENK--TPEPNSFRMKV 158
++PKHEE+ + + T E+ +Y+ PPLL+ ++ + E K T EP +
Sbjct: 132 MVPKHEEEAFKKFTPVPEETCRYL----PYPPLLRAMILAQWQKEGKEITEEPMIDLQRT 187
Query: 159 SFLETCNN 166
S L+
Sbjct: 188 SHLKAAKK 195
>gi|149052073|gb|EDM03890.1| mitochondrial ribosomal protein S34 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 124
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 78 VFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKV 137
F+G E +EI Y D+RL+PKHEE+ + TGK E ++ V PPLL+ +
Sbjct: 25 TFKGKSEETAREIEQVMYH-DWRLVPKHEEEAFTAFTGKAEDRLNL----VPYPPLLRAM 79
Query: 138 V 138
+
Sbjct: 80 I 80
>gi|395515790|ref|XP_003762082.1| PREDICTED: 28S ribosomal protein S34, mitochondrial [Sarcophilus
harrisii]
Length = 200
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 78 VFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKV 137
FRG E E +EI Y D+RL+PKHEE+ + K E+ I+Y V PPL + +
Sbjct: 106 TFRGKTESEEKEIDQVMYH-DWRLVPKHEEEAFKNFIPKNEETIRY----VPYPPLFRAM 160
Query: 138 V 138
+
Sbjct: 161 I 161
>gi|402581069|gb|EJW75018.1| hypothetical protein WUBG_14075 [Wuchereria bancrofti]
Length = 102
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILKVQP 54
I+YIG + GK LWEIL L+ G+GR++ + + R +P +P Y KI++ P
Sbjct: 5 IRYIGNYDINAEGKFLWEILCQLRNLGIGRIVTKNEWARKWPKQPSYLKIVQACP 59
>gi|312121208|ref|XP_003151863.1| hypothetical protein LOAG_16327 [Loa loa]
gi|307752972|gb|EFO12206.1| hypothetical protein LOAG_16327, partial [Loa loa]
Length = 56
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 3 IKYIGR-TTDFAGKTLWEILGNLKGYGVGRLLYRQRFQR-YP-EPCYFKILK 51
I+YIG + GK LWEIL L+ GVGR++ + + R +P +P Y KI++
Sbjct: 5 IRYIGNYDINAEGKFLWEILCQLRNLGVGRIVTKNEWGRKWPKQPSYLKIVQ 56
>gi|325185617|emb|CCA20099.1| hypothetical protein TRIADDRAFT_60507 [Albugo laibachii Nc14]
Length = 81
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 16 TLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L++I+ + YGVG+ + R + R+ EPCY++I +++P + + +
Sbjct: 3 NLFQIICPKRNYGVGQRVSRSIWNRFTEPCYWEITRIRPA----------PDLKHGKAFG 52
Query: 76 ASVFRGVLEPEVQEI 90
FRG +P+ + I
Sbjct: 53 RFTFRGKTDPKEKRI 67
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.139 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,721,113,629
Number of Sequences: 23463169
Number of extensions: 161033441
Number of successful extensions: 322272
Number of sequences better than 100.0: 129
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 322042
Number of HSP's gapped (non-prelim): 142
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)