Your job contains 1 sequence.
>psy1519
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN
LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK
IQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK
IESFFGTPLSPELYEIKPEVAEYFKQKKPY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1519
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260460 - symbol:mRpS34 "mitochondrial ribosomal p... 375 1.3e-34 1
RGD|1305623 - symbol:Mrps34 "mitochondrial ribosomal prot... 158 1.3e-11 1
UNIPROTKB|C9JJ19 - symbol:MRPS34 "28S ribosomal protein S... 154 3.5e-11 1
UNIPROTKB|P82930 - symbol:MRPS34 "28S ribosomal protein S... 153 4.5e-11 1
ZFIN|ZDB-GENE-041114-71 - symbol:mrps34 "mitochondrial ri... 153 4.5e-11 1
UNIPROTKB|F1MKN3 - symbol:MRPS34 "28S ribosomal protein S... 149 4.6e-10 1
MGI|MGI:1930188 - symbol:Mrps34 "mitochondrial ribosomal ... 149 4.6e-10 1
UNIPROTKB|P82929 - symbol:MRPS34 "28S ribosomal protein S... 143 6.0e-09 1
UNIPROTKB|F1RG19 - symbol:MRPS34 "Uncharacterized protein... 136 7.1e-08 1
WB|WBGene00010905 - symbol:mrps-34 species:6239 "Caenorha... 130 6.2e-07 1
>FB|FBgn0260460 [details] [associations]
symbol:mRpS34 "mitochondrial ribosomal protein S34"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] EMBL:AE014296 GO:GO:0006412 GO:GO:0003735
GO:GO:0005763 CTD:65993 eggNOG:NOG85261
GeneTree:ENSGT00510000053984 EMBL:BT099501 RefSeq:NP_524104.2
UniGene:Dm.5677 STRING:Q9VV39 EnsemblMetazoa:FBtr0075379
GeneID:39809 KEGG:dme:Dmel_CG42648 UCSC:CG13037-RA
FlyBase:FBgn0260460 InParanoid:Q9VV39 OMA:RYPEPCY OrthoDB:EOG479CQ6
GenomeRNAi:39809 NextBio:815494 Uniprot:Q9VV39
Length = 188
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 87/195 (44%), Positives = 117/195 (60%)
Query: 3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
IKYIGRTTDF G TLWE++ NL +GVGRLL R FQRYPEPCY +ILKVQ V E
Sbjct: 6 IKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60
Query: 63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
P E RKV V V +RGV +P+ EI++TSYK DY L+P+ +E ++L K E I
Sbjct: 61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVI- 118
Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
+ +++PPLL+++V+ + T PN +MKV + T N + R A + +
Sbjct: 119 -LPTKIELPPLLRELVSEE------TGNPNP-QMKVHYKLTDNKMARLAKDGEKPTVNFA 170
Query: 183 SFFGTP--LSPELYE 195
G P +S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185
>RGD|1305623 [details] [associations]
symbol:Mrps34 "mitochondrial ribosomal protein S34"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] RGD:1305623
GO:GO:0005739 GO:GO:0005840 EMBL:CH473948 CTD:65993
OrthoDB:EOG4M91SH GeneTree:ENSGT00390000008964 OMA:DEPCYWR
IPI:IPI00204381 RefSeq:NP_001099241.1 UniGene:Rn.11777
Ensembl:ENSRNOT00000021075 GeneID:287126 KEGG:rno:287126
UCSC:RGD:1305623 NextBio:625562 Uniprot:D4ABM5
Length = 218
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLARLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGRAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E +EI Y D+RL+PKHEE+ + TGK E ++ + P+ PPLL+
Sbjct: 120 ---FKGKSEETAREIEQVMYH-DWRLVPKHEEEAFTAFTGKAEDRLNLV-PY---PPLLR 171
Query: 136 KVVARDLELENKT 148
++ + + T
Sbjct: 172 AMILAERQKNGDT 184
>UNIPROTKB|C9JJ19 [details] [associations]
symbol:MRPS34 "28S ribosomal protein S34, mitochondrial"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IDA] EMBL:AC012180 IPI:IPI00658155
ProteinModelPortal:C9JJ19 PRIDE:C9JJ19 Ensembl:ENST00000177742
UCSC:uc021taj.1 HGNC:HGNC:16618 HOGENOM:HOG000154216 OMA:DEPCYWR
ArrayExpress:C9JJ19 Bgee:C9JJ19 GO:GO:0005739 Uniprot:C9JJ19
Length = 225
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 43/140 (30%), Positives = 76/140 (54%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++ +
Sbjct: 64 LLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILTFK 121
Query: 76 ASVFR--GVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPL 133
+ F G E E +EI Y D+RL+PKHEE+ + T E + + P+ PPL
Sbjct: 122 DASFSSSGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLASV-PY---PPL 176
Query: 134 LKKVVARDLEL--ENKTPEP 151
L+ ++ + + + T EP
Sbjct: 177 LRAMIIAERQKNGDTSTEEP 196
>UNIPROTKB|P82930 [details] [associations]
symbol:MRPS34 "28S ribosomal protein S34, mitochondrial"
species:9606 "Homo sapiens" [GO:0005840 "ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] GO:GO:0005739
GO:GO:0005840 CTD:65993 eggNOG:NOG85261 HOGENOM:HOG000154216
HOVERGEN:HBG036130 OrthoDB:EOG4M91SH EMBL:BC001182 IPI:IPI00169413
RefSeq:NP_076425.1 UniGene:Hs.720388 ProteinModelPortal:P82930
IntAct:P82930 STRING:P82930 PhosphoSite:P82930 DMDM:24212369
PaxDb:P82930 PRIDE:P82930 DNASU:65993 Ensembl:ENST00000397375
GeneID:65993 KEGG:hsa:65993 UCSC:uc002cmo.3 GeneCards:GC16M001821
HGNC:HGNC:16618 HPA:HPA042112 MIM:611994 neXtProt:NX_P82930
PharmGKB:PA31021 PhylomeDB:P82930 GenomeRNAi:65993 NextBio:67485
ArrayExpress:P82930 Bgee:P82930 CleanEx:HS_MRPS34
Genevestigator:P82930 GermOnline:ENSG00000074071 Uniprot:P82930
Length = 218
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + + P+ PPLL+
Sbjct: 120 ---FKGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLASV-PY---PPLLR 171
Query: 136 KVVARDLEL--ENKTPEP 151
++ + + + T EP
Sbjct: 172 AMIIAERQKNGDTSTEEP 189
>ZFIN|ZDB-GENE-041114-71 [details] [associations]
symbol:mrps34 "mitochondrial ribosomal protein S34"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005840 "ribosome" evidence=IEA] ZFIN:ZDB-GENE-041114-71
HOVERGEN:HBG036130 EMBL:BC085462 IPI:IPI00835140 UniGene:Dr.16863
STRING:Q5U3N2 InParanoid:Q5U3N2 ArrayExpress:Q5U3N2 Uniprot:Q5U3N2
Length = 220
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 48/141 (34%), Positives = 76/141 (53%)
Query: 17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L+ +L ++ +G+GRL R+ + + EPCY+KI KV+ D EN ++ K +
Sbjct: 63 LFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVKV---DYTAENM--DHGKA--WG 115
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
FRG EP+ +E+ Y D+RL+PKHEE+E+ R E + V PPLL+
Sbjct: 116 VLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEFRRCEPVPEPAARS----VRYPPLLR 170
Query: 136 KVV----ARDLELENKT-PEP 151
++ A++ +E T PEP
Sbjct: 171 AMILAQQAKEQGVEVSTLPEP 191
>UNIPROTKB|F1MKN3 [details] [associations]
symbol:MRPS34 "28S ribosomal protein S34, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 IPI:IPI00694386 UniGene:Bt.49027
GeneTree:ENSGT00390000008964 OMA:DEPCYWR EMBL:DAAA02057304
Ensembl:ENSBTAT00000037541 Uniprot:F1MKN3
Length = 218
Score = 149 (57.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 49/165 (29%), Positives = 86/165 (52%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI + D+RL+PKHEE + T E+K + + P+ PPLL+
Sbjct: 120 ---FKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEEKPRPV-PY---PPLLR 171
Query: 136 KVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
++ + + K +P++ +S LE + EN A K
Sbjct: 172 AMILAERQ---KNGDPSTEEPMLS-LERIRTDPWDYPENQEAKKK 212
>MGI|MGI:1930188 [details] [associations]
symbol:Mrps34 "mitochondrial ribosomal protein S34"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
MGI:MGI:1930188 GO:GO:0005739 GO:GO:0005840 CTD:65993
eggNOG:NOG85261 HOGENOM:HOG000154216 HOVERGEN:HBG036130
OrthoDB:EOG4M91SH EMBL:AF220294 EMBL:AK002285 EMBL:AK004049
EMBL:AK007337 EMBL:AK019922 EMBL:BC024336 IPI:IPI00120709
RefSeq:NP_075749.1 UniGene:Mm.328851 STRING:Q9JIK9
PhosphoSite:Q9JIK9 PaxDb:Q9JIK9 PRIDE:Q9JIK9
Ensembl:ENSMUST00000043907 Ensembl:ENSMUST00000154236 GeneID:79044
KEGG:mmu:79044 UCSC:uc008ayy.1 GeneTree:ENSGT00390000008964
InParanoid:Q9JIK9 OMA:DEPCYWR NextBio:349839 Bgee:Q9JIK9
CleanEx:MM_MRPS34 Genevestigator:Q9JIK9
GermOnline:ENSMUSG00000038880 Uniprot:Q9JIK9
Length = 218
Score = 149 (57.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 40/133 (30%), Positives = 72/133 (54%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLARLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGRAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E +EI Y D+RL+PKHEE+ + T K E ++ + P+ PPLL+
Sbjct: 120 ---FKGKSEDTAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNSV-PY---PPLLR 171
Query: 136 KVVARDLELENKT 148
++ + + T
Sbjct: 172 AMILAERQKNGDT 184
>UNIPROTKB|P82929 [details] [associations]
symbol:MRPS34 "28S ribosomal protein S34, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] GO:GO:0005739 GO:GO:0005840
EMBL:BC102289 IPI:IPI00694386 RefSeq:NP_001030577.1
UniGene:Bt.49027 IntAct:P82929 STRING:P82929 PRIDE:P82929
GeneID:618357 KEGG:bta:618357 CTD:65993 eggNOG:NOG85261
HOGENOM:HOG000154216 HOVERGEN:HBG036130 InParanoid:P82929
OrthoDB:EOG4M91SH NextBio:20901136 Uniprot:P82929
Length = 218
Score = 143 (55.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 48/165 (29%), Positives = 85/165 (51%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++LG L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI + D+RL+PKHEE + T E+ + + P+ PPLL+
Sbjct: 120 ---FKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEETPRPV-PY---PPLLR 171
Query: 136 KVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
++ + + K +P++ +S LE + EN A K
Sbjct: 172 AMILAERQ---KNGDPSTEEPMLS-LERIRTDPWDYPENQEAKKK 212
>UNIPROTKB|F1RG19 [details] [associations]
symbol:MRPS34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GeneTree:ENSGT00390000008964 OMA:DEPCYWR EMBL:CU929968
Ensembl:ENSSSCT00000008784 Uniprot:F1RG19
Length = 218
Score = 136 (52.9 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
L ++L L +G+GRL+ R+ + ++ EPCY+++ +V+P NL+ H ++
Sbjct: 64 LLQLLNRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYAAENLD--HGKAWGILT-- 119
Query: 76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
F+G E E +EI Y D+RL+PKHEE+ + T E + P+ PPLL+
Sbjct: 120 ---FKGKTESEAREIEQVMYH-DWRLVPKHEEEAFTAFTLVPEDTPLSV-PY---PPLLR 171
Query: 136 KVVARDLEL--ENKTPEP 151
++ + + T EP
Sbjct: 172 AMILAQRQKYGDTSTEEP 189
>WB|WBGene00010905 [details] [associations]
symbol:mrps-34 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 EMBL:Z34802
eggNOG:NOG85261 PIR:B88431 PIR:T23838 RefSeq:NP_497919.1
ProteinModelPortal:Q21601 PaxDb:Q21601 EnsemblMetazoa:M88.2.1
EnsemblMetazoa:M88.2.2 GeneID:175592 KEGG:cel:CELE_M88.2 UCSC:M88.2
CTD:175592 WormBase:M88.2 GeneTree:ENSGT00510000053984
HOGENOM:HOG000021367 InParanoid:Q21601 OMA:MKILRAE NextBio:888816
Uniprot:Q21601
Length = 228
Score = 130 (50.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YPE-PCYFKILKVQPVQHD 58
I+++G D A GK L+EIL L+ +GVGRL+ + + R +P P Y KIL+ +P
Sbjct: 6 IRFVGNH-DIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEPGMDR 64
Query: 59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE 118
E VY VFRG V E + D++L+ KH+E+ + T +
Sbjct: 65 WLFEGK--------VYAEWVFRGK-NLGVYEFSKDLNRSDWQLVHKHQEKSYTSSTTPMQ 115
Query: 119 KKIQYIDPWVDMPPL---LKKVVARDLELENKT 148
+ + +PPL L + AR L+ KT
Sbjct: 116 DLV--LPDSFPLPPLQVHLSQKSARKNGLDEKT 146
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.139 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 210 0.00080 112 3 11 22 0.39 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 605 (64 KB)
Total size of DFA: 192 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 20.35u 0.09s 20.44t Elapsed: 00:00:20
Total cpu time: 20.35u 0.09s 20.44t Elapsed: 00:00:27
Start: Thu Aug 15 14:31:40 2013 End: Thu Aug 15 14:32:07 2013