Query psy15190
Match_columns 117
No_of_seqs 105 out of 1219
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 22:54:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.8 6.5E-18 2.2E-22 107.8 9.8 89 1-93 105-202 (344)
2 4h5i_A Guanine nucleotide-exch 99.7 1.5E-17 5.1E-22 106.7 10.1 81 9-93 262-344 (365)
3 3ow8_A WD repeat-containing pr 99.7 3E-17 1E-21 103.6 9.3 89 1-93 188-280 (321)
4 1got_B GT-beta; complex (GTP-b 99.7 6.5E-17 2.2E-21 102.6 10.5 89 1-93 166-258 (340)
5 4gqb_B Methylosome protein 50; 99.7 7.7E-17 2.6E-21 102.8 10.2 88 1-93 239-332 (344)
6 1vyh_C Platelet-activating fac 99.7 5.6E-17 1.9E-21 105.3 9.5 89 1-93 132-224 (410)
7 3ow8_A WD repeat-containing pr 99.7 1.1E-16 3.8E-21 101.0 10.6 87 1-91 230-320 (321)
8 3frx_A Guanine nucleotide-bind 99.7 1.2E-16 4.2E-21 100.6 10.4 88 1-92 42-138 (319)
9 2ynn_A Coatomer subunit beta'; 99.7 1.5E-16 5.2E-21 99.6 9.9 89 1-92 79-172 (304)
10 3vu4_A KMHSV2; beta-propeller 99.7 2.3E-16 7.9E-21 100.7 10.8 80 9-92 188-271 (355)
11 4g56_B MGC81050 protein; prote 99.7 2.3E-16 7.8E-21 100.9 10.5 88 1-93 251-344 (357)
12 2ynn_A Coatomer subunit beta'; 99.7 1.5E-16 5.2E-21 99.6 9.3 88 1-92 37-128 (304)
13 2hes_X YDR267CP; beta-propelle 99.7 8.8E-17 3E-21 101.7 8.2 92 1-92 82-184 (330)
14 4gq1_A NUP37; propeller, trans 99.7 3.8E-17 1.3E-21 105.6 6.3 89 1-93 113-219 (393)
15 1vyh_C Platelet-activating fac 99.7 1.7E-16 5.8E-21 103.0 9.4 87 1-91 320-410 (410)
16 4g56_B MGC81050 protein; prote 99.7 3.1E-16 1.1E-20 100.3 9.6 89 1-93 117-214 (357)
17 2xzm_R RACK1; ribosome, transl 99.7 5.9E-16 2E-20 98.2 10.6 88 1-92 51-149 (343)
18 2pbi_B Guanine nucleotide-bind 99.7 6.9E-16 2.4E-20 98.5 10.6 89 1-93 178-272 (354)
19 1nr0_A Actin interacting prote 99.7 1E-15 3.5E-20 103.7 10.7 93 1-93 172-271 (611)
20 2pm7_B Protein transport prote 99.7 1.8E-15 6.1E-20 94.4 10.4 90 1-92 33-132 (297)
21 4ery_A WD repeat-containing pr 99.6 1.7E-15 5.9E-20 94.7 10.0 89 1-93 47-139 (312)
22 3fm0_A Protein CIAO1; WDR39,SG 99.6 8.2E-16 2.8E-20 97.8 7.8 91 1-92 85-181 (345)
23 2ymu_A WD-40 repeat protein; u 99.6 1.6E-15 5.6E-20 101.3 9.2 80 8-92 8-88 (577)
24 3vl1_A 26S proteasome regulato 99.6 3.1E-15 1E-19 96.6 9.9 89 1-93 121-213 (420)
25 1got_B GT-beta; complex (GTP-b 99.6 3.5E-15 1.2E-19 94.6 10.0 93 1-93 79-174 (340)
26 2ymu_A WD-40 repeat protein; u 99.6 1.9E-15 6.4E-20 101.0 9.1 84 1-89 491-577 (577)
27 4aow_A Guanine nucleotide-bind 99.6 4.9E-15 1.7E-19 93.0 10.4 87 7-93 29-118 (340)
28 3fm0_A Protein CIAO1; WDR39,SG 99.6 3.9E-15 1.3E-19 94.7 9.9 90 1-92 40-136 (345)
29 3iz6_a 40S ribosomal protein R 99.6 4.8E-15 1.6E-19 95.3 10.3 92 1-92 230-329 (380)
30 2pm7_B Protein transport prote 99.6 4.1E-15 1.4E-19 92.8 8.9 81 10-92 3-86 (297)
31 2hes_X YDR267CP; beta-propelle 99.6 7.9E-15 2.7E-19 92.7 10.1 91 1-91 36-137 (330)
32 3bg1_A Protein SEC13 homolog; 99.6 3.4E-15 1.2E-19 93.9 8.3 90 1-92 37-136 (316)
33 4ery_A WD repeat-containing pr 99.6 1.1E-14 3.9E-19 90.9 10.5 89 1-93 89-181 (312)
34 3dm0_A Maltose-binding peripla 99.6 5.3E-15 1.8E-19 101.4 9.6 88 1-92 407-503 (694)
35 2aq5_A Coronin-1A; WD40 repeat 99.6 1.1E-14 3.7E-19 94.0 10.2 91 1-93 106-208 (402)
36 2pbi_B Guanine nucleotide-bind 99.6 9.8E-15 3.4E-19 93.2 9.6 91 1-93 222-316 (354)
37 2aq5_A Coronin-1A; WD40 repeat 99.6 1.4E-14 4.9E-19 93.4 10.3 93 1-93 59-164 (402)
38 3frx_A Guanine nucleotide-bind 99.6 2.3E-14 8E-19 90.2 10.6 89 1-93 131-228 (319)
39 3f3f_A Nucleoporin SEH1; struc 99.6 2.1E-14 7.1E-19 89.8 10.3 85 9-93 4-91 (351)
40 3bg1_A Protein SEC13 homolog; 99.6 1.4E-14 4.9E-19 91.1 9.6 90 1-91 191-292 (316)
41 4e54_B DNA damage-binding prot 99.6 4.9E-15 1.7E-19 96.7 7.4 90 1-92 144-240 (435)
42 3dm0_A Maltose-binding peripla 99.6 1.6E-14 5.6E-19 99.0 10.2 92 1-93 454-551 (694)
43 3iz6_a 40S ribosomal protein R 99.6 6.4E-15 2.2E-19 94.7 7.6 82 7-92 57-139 (380)
44 3k26_A Polycomb protein EED; W 99.6 2.5E-14 8.6E-19 90.4 10.3 92 1-93 97-193 (366)
45 4aow_A Guanine nucleotide-bind 99.6 3.8E-14 1.3E-18 88.9 11.0 88 1-93 197-287 (340)
46 3odt_A Protein DOA1; ubiquitin 99.6 2.1E-14 7.3E-19 89.1 9.7 88 1-93 207-297 (313)
47 2xzm_R RACK1; ribosome, transl 99.6 2.8E-14 9.5E-19 90.5 10.2 88 1-92 196-285 (343)
48 1nr0_A Actin interacting prote 99.6 1.3E-14 4.6E-19 98.3 9.2 88 1-92 131-221 (611)
49 1erj_A Transcriptional repress 99.6 8.2E-14 2.8E-18 89.9 11.9 88 1-93 147-239 (393)
50 1erj_A Transcriptional repress 99.6 4.3E-14 1.5E-18 91.2 10.2 72 18-93 125-197 (393)
51 1sq9_A Antiviral protein SKI8; 99.6 3.8E-14 1.3E-18 90.8 9.7 92 1-92 260-395 (397)
52 2oaj_A Protein SNI1; WD40 repe 99.5 3.3E-14 1.1E-18 100.2 9.9 80 14-93 486-606 (902)
53 3v7d_B Cell division control p 99.5 5.6E-14 1.9E-18 91.9 10.4 87 1-92 292-381 (464)
54 4e54_B DNA damage-binding prot 99.5 1.8E-14 6.3E-19 94.0 7.9 91 1-92 233-327 (435)
55 3f3f_A Nucleoporin SEH1; struc 99.5 6.4E-14 2.2E-18 87.6 9.9 93 1-93 35-144 (351)
56 2pm9_A Protein WEB1, protein t 99.5 5.3E-14 1.8E-18 90.5 9.4 88 1-92 242-337 (416)
57 2j04_B YDR362CP, TAU91; beta p 99.5 9.2E-14 3.1E-18 93.1 10.9 80 10-93 260-343 (524)
58 3lrv_A PRE-mRNA-splicing facto 99.5 7.4E-14 2.5E-18 88.5 9.9 89 1-93 151-245 (343)
59 3v7d_B Cell division control p 99.5 8.8E-14 3E-18 91.0 10.0 88 1-93 144-237 (464)
60 1pgu_A Actin interacting prote 99.5 4.8E-14 1.7E-18 94.5 8.9 89 1-92 512-614 (615)
61 4ggc_A P55CDC, cell division c 99.5 1.2E-13 4E-18 86.0 9.8 92 1-92 47-181 (318)
62 3mmy_A MRNA export factor; mRN 99.5 1.1E-13 3.7E-18 87.4 9.8 88 1-93 66-161 (368)
63 3dwl_C Actin-related protein 2 99.5 1.9E-14 6.4E-19 91.8 6.3 92 1-93 35-132 (377)
64 2oit_A Nucleoporin 214KDA; NH2 99.5 3.9E-14 1.3E-18 92.9 7.8 78 10-91 143-222 (434)
65 2j04_B YDR362CP, TAU91; beta p 99.5 3.9E-14 1.3E-18 94.9 7.9 89 1-93 289-387 (524)
66 4gga_A P55CDC, cell division c 99.5 1.3E-13 4.3E-18 89.6 10.1 87 1-92 127-218 (420)
67 4ggc_A P55CDC, cell division c 99.5 1.4E-13 4.8E-18 85.7 9.3 87 1-91 223-314 (318)
68 3ei3_B DNA damage-binding prot 99.5 1.6E-13 5.5E-18 87.8 9.5 92 1-93 187-283 (383)
69 2j04_A TAU60, YPL007P, hypothe 99.5 1.4E-13 4.7E-18 92.6 9.3 91 1-93 109-212 (588)
70 3jrp_A Fusion protein of prote 99.5 2.4E-13 8.3E-18 86.2 10.0 91 1-93 35-135 (379)
71 3zwl_B Eukaryotic translation 99.5 3.3E-13 1.1E-17 85.3 10.3 81 9-93 25-106 (369)
72 3gre_A Serine/threonine-protei 99.5 8.5E-14 2.9E-18 90.4 7.7 90 1-93 194-293 (437)
73 4gga_A P55CDC, cell division c 99.5 1.5E-13 5E-18 89.3 8.6 87 1-92 303-395 (420)
74 3dwl_C Actin-related protein 2 99.5 2.2E-13 7.5E-18 86.9 9.1 92 1-93 124-237 (377)
75 2oaj_A Protein SNI1; WD40 repe 99.5 3.7E-13 1.2E-17 95.0 10.9 81 9-90 568-659 (902)
76 3sfz_A APAF-1, apoptotic pepti 99.5 2.6E-13 9E-18 97.6 10.0 89 1-93 639-733 (1249)
77 3odt_A Protein DOA1; ubiquitin 99.5 2.8E-13 9.6E-18 84.0 8.7 88 1-93 167-256 (313)
78 3mkq_A Coatomer beta'-subunit; 99.5 3E-13 1E-17 93.5 9.5 88 1-92 37-128 (814)
79 3jrp_A Fusion protein of prote 99.5 4.5E-13 1.5E-17 85.0 9.6 93 1-93 127-241 (379)
80 1r5m_A SIR4-interacting protei 99.5 8E-13 2.7E-17 84.9 10.8 89 1-93 229-320 (425)
81 1r5m_A SIR4-interacting protei 99.5 6.7E-13 2.3E-17 85.2 10.2 88 1-93 271-362 (425)
82 3vl1_A 26S proteasome regulato 99.5 1.1E-12 3.7E-17 84.6 11.1 92 1-93 163-279 (420)
83 1sq9_A Antiviral protein SKI8; 99.5 5.1E-13 1.8E-17 85.5 9.4 89 1-93 209-323 (397)
84 4aez_A CDC20, WD repeat-contai 99.5 9.3E-13 3.2E-17 85.0 10.4 89 1-93 198-294 (401)
85 4a11_B DNA excision repair pro 99.5 3.8E-13 1.3E-17 86.1 8.4 92 2-93 26-132 (408)
86 1k8k_C P40, ARP2/3 complex 41 99.5 5E-13 1.7E-17 84.8 8.8 91 1-93 32-128 (372)
87 3i2n_A WD repeat-containing pr 99.4 3.1E-13 1.1E-17 85.2 7.5 92 1-92 236-353 (357)
88 1gxr_A ESG1, transducin-like e 99.4 1.7E-12 5.8E-17 81.2 10.6 89 1-93 121-215 (337)
89 4a11_B DNA excision repair pro 99.4 1.8E-12 6E-17 83.0 10.9 93 1-93 168-277 (408)
90 3jro_A Fusion protein of prote 99.4 8.6E-13 3E-17 91.5 10.1 91 1-93 33-133 (753)
91 3ei3_B DNA damage-binding prot 99.4 1.2E-12 4.2E-17 83.7 10.0 87 1-92 143-236 (383)
92 3k26_A Polycomb protein EED; W 99.4 4E-13 1.4E-17 84.9 7.6 92 1-93 140-261 (366)
93 4aez_A CDC20, WD repeat-contai 99.4 1.5E-12 5.2E-17 84.1 10.4 86 1-91 115-204 (401)
94 2xyi_A Probable histone-bindin 99.4 1.3E-12 4.4E-17 85.2 10.1 89 1-92 256-353 (430)
95 2w18_A PALB2, fancn, partner a 99.4 9.8E-13 3.4E-17 83.9 8.9 84 1-90 262-355 (356)
96 2vdu_B TRNA (guanine-N(7)-)-me 99.4 5.3E-13 1.8E-17 87.4 7.9 81 10-93 189-272 (450)
97 3mmy_A MRNA export factor; mRN 99.4 1.2E-12 4.1E-17 82.7 9.2 85 7-93 30-118 (368)
98 1p22_A F-BOX/WD-repeat protein 99.4 1.1E-12 3.8E-17 85.5 9.2 86 1-93 155-243 (435)
99 3zwl_B Eukaryotic translation 99.4 3E-12 1E-16 80.9 10.7 87 1-92 56-151 (369)
100 2pm9_A Protein WEB1, protein t 99.4 1E-12 3.4E-17 84.6 8.6 92 1-93 91-198 (416)
101 3gre_A Serine/threonine-protei 99.4 1.1E-12 3.8E-17 85.2 8.7 86 4-91 48-141 (437)
102 1pgu_A Actin interacting prote 99.4 3.4E-12 1.2E-16 85.6 11.1 93 1-93 185-284 (615)
103 2xyi_A Probable histone-bindin 99.4 4.3E-12 1.5E-16 82.8 11.3 91 1-92 206-309 (430)
104 1k8k_C P40, ARP2/3 complex 41 99.4 1.4E-12 4.8E-17 82.7 8.4 82 7-92 193-274 (372)
105 3mkq_A Coatomer beta'-subunit; 99.4 1.2E-12 4.2E-17 90.5 8.5 82 8-93 5-87 (814)
106 1gxr_A ESG1, transducin-like e 99.4 6.7E-12 2.3E-16 78.5 11.0 85 1-90 248-335 (337)
107 2ovr_B FBW7, F-BOX/WD repeat p 99.4 2.2E-12 7.5E-17 84.2 8.9 86 1-93 141-229 (445)
108 1yfq_A Cell cycle arrest prote 99.4 2.5E-12 8.5E-17 80.8 8.7 87 1-92 35-131 (342)
109 3lrv_A PRE-mRNA-splicing facto 99.4 4.4E-12 1.5E-16 80.4 9.8 77 14-93 123-202 (343)
110 4gq1_A NUP37; propeller, trans 99.4 2E-12 6.7E-17 83.6 8.1 93 1-93 168-287 (393)
111 1p22_A F-BOX/WD-repeat protein 99.4 2.4E-12 8.2E-17 83.9 8.4 85 1-92 278-365 (435)
112 3sfz_A APAF-1, apoptotic pepti 99.4 4.6E-12 1.6E-16 91.2 10.4 89 1-93 681-775 (1249)
113 3dw8_B Serine/threonine-protei 99.4 3.9E-12 1.3E-16 82.6 9.1 91 1-92 200-315 (447)
114 4h5i_A Guanine nucleotide-exch 99.4 1.8E-12 6.2E-17 83.1 6.6 84 10-93 213-301 (365)
115 2w18_A PALB2, fancn, partner a 99.3 4E-12 1.4E-16 81.1 7.8 89 1-93 159-270 (356)
116 3i2n_A WD repeat-containing pr 99.3 5.5E-12 1.9E-16 79.5 8.5 88 1-92 192-291 (357)
117 3jro_A Fusion protein of prote 99.3 5.6E-12 1.9E-16 87.5 9.1 92 1-92 125-238 (753)
118 2vdu_B TRNA (guanine-N(7)-)-me 99.3 1.9E-11 6.4E-16 80.1 10.5 93 1-93 127-230 (450)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.3 7E-12 2.4E-16 81.8 8.2 85 2-93 222-309 (445)
120 3vu4_A KMHSV2; beta-propeller 99.3 2.5E-11 8.5E-16 77.5 10.4 92 1-92 220-336 (355)
121 3dw8_B Serine/threonine-protei 99.3 1.8E-11 6.2E-16 79.4 9.8 88 1-93 251-374 (447)
122 1yfq_A Cell cycle arrest prote 99.3 1.1E-11 3.9E-16 77.8 8.6 89 1-93 172-283 (342)
123 2j04_A TAU60, YPL007P, hypothe 99.3 1.3E-11 4.3E-16 83.3 7.2 77 14-93 83-161 (588)
124 3bws_A Protein LP49; two-domai 99.1 3E-10 1E-14 73.6 7.2 89 1-93 146-244 (433)
125 2oit_A Nucleoporin 214KDA; NH2 99.1 9.7E-11 3.3E-15 76.9 4.5 79 15-93 91-182 (434)
126 2hqs_A Protein TOLB; TOLB, PAL 99.1 1.2E-09 4.2E-14 71.1 9.5 88 1-93 161-257 (415)
127 1l0q_A Surface layer protein; 99.1 2.5E-09 8.5E-14 68.4 10.0 87 1-93 14-106 (391)
128 1l0q_A Surface layer protein; 98.9 6.9E-08 2.4E-12 61.7 11.8 87 1-93 56-148 (391)
129 3bws_A Protein LP49; two-domai 98.9 2.9E-08 9.8E-13 64.3 9.4 88 1-93 193-293 (433)
130 1nir_A Nitrite reductase; hemo 98.7 1.6E-07 5.5E-12 63.3 10.2 86 1-92 161-257 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 98.7 4.6E-07 1.6E-11 59.1 10.5 87 1-92 205-300 (415)
132 3o4h_A Acylamino-acid-releasin 98.6 8.4E-08 2.9E-12 64.7 6.8 85 1-90 177-274 (582)
133 2ojh_A Uncharacterized protein 98.5 2.6E-07 8.7E-12 56.4 6.0 86 1-90 24-115 (297)
134 2ojh_A Uncharacterized protein 98.5 8.1E-07 2.8E-11 54.2 8.1 89 2-93 154-259 (297)
135 1k32_A Tricorn protease; prote 98.5 8.6E-07 2.9E-11 63.7 8.6 87 3-93 363-462 (1045)
136 2ecf_A Dipeptidyl peptidase IV 98.4 6.7E-07 2.3E-11 61.7 6.7 68 19-93 111-182 (741)
137 1ri6_A Putative isomerase YBHE 98.4 2.7E-06 9.2E-11 53.1 8.4 74 14-90 35-113 (343)
138 3scy_A Hypothetical bacterial 98.4 4.6E-06 1.6E-10 52.9 9.5 100 15-116 257-360 (361)
139 1xfd_A DIP, dipeptidyl aminope 98.4 7.6E-07 2.6E-11 61.2 5.7 90 1-93 39-144 (723)
140 3u4y_A Uncharacterized protein 98.3 8.7E-06 3E-10 50.8 10.0 92 1-93 110-208 (331)
141 3u4y_A Uncharacterized protein 98.3 5.7E-06 1.9E-10 51.7 8.9 89 1-93 22-118 (331)
142 3vgz_A Uncharacterized protein 98.3 8.5E-06 2.9E-10 51.2 9.4 92 2-93 167-263 (353)
143 3hfq_A Uncharacterized protein 98.3 6.8E-06 2.3E-10 51.8 8.8 90 1-91 65-170 (347)
144 1pby_B Quinohemoprotein amine 98.3 1.6E-05 5.6E-10 49.4 10.4 74 13-93 237-311 (337)
145 1xip_A Nucleoporin NUP159; bet 98.3 9.2E-06 3.2E-10 52.9 9.2 81 1-92 108-191 (388)
146 1z68_A Fibroblast activation p 98.3 5.3E-07 1.8E-11 62.1 3.5 86 1-92 38-139 (719)
147 1nir_A Nitrite reductase; hemo 98.2 6.2E-06 2.1E-10 55.7 8.1 87 7-93 411-515 (543)
148 3vgz_A Uncharacterized protein 98.2 1.6E-05 5.4E-10 49.9 8.6 71 19-93 143-216 (353)
149 2z3z_A Dipeptidyl aminopeptida 98.2 2.5E-06 8.4E-11 58.7 4.9 46 1-47 103-150 (706)
150 3o4h_A Acylamino-acid-releasin 98.1 6.6E-06 2.3E-10 55.5 6.5 69 20-93 153-228 (582)
151 2ecf_A Dipeptidyl peptidase IV 98.1 9.8E-06 3.3E-10 56.0 7.4 48 1-49 131-183 (741)
152 3hfq_A Uncharacterized protein 98.1 3.2E-05 1.1E-09 48.7 8.8 73 18-91 241-316 (347)
153 1k32_A Tricorn protease; prote 98.1 9.4E-06 3.2E-10 58.4 6.9 85 1-90 402-500 (1045)
154 1pby_B Quinohemoprotein amine 98.1 5.7E-05 2E-09 46.9 9.2 93 1-93 13-125 (337)
155 1jmx_B Amine dehydrogenase; ox 98.0 4.9E-05 1.7E-09 47.5 8.9 92 1-92 23-134 (349)
156 1ri6_A Putative isomerase YBHE 98.0 5E-05 1.7E-09 47.3 8.7 96 18-115 232-330 (343)
157 1xfd_A DIP, dipeptidyl aminope 98.0 3.8E-05 1.3E-09 52.9 8.0 74 20-93 176-290 (723)
158 3scy_A Hypothetical bacterial 97.9 7.9E-05 2.7E-09 47.2 8.4 77 15-92 48-129 (361)
159 1q7f_A NHL, brain tumor CG1071 97.9 0.00033 1.1E-08 42.9 10.8 85 2-91 188-279 (286)
160 2z3z_A Dipeptidyl aminopeptida 97.9 4.5E-05 1.5E-09 52.5 7.1 75 14-91 255-341 (706)
161 4a5s_A Dipeptidyl peptidase 4 97.8 3.8E-05 1.3E-09 53.4 5.9 87 1-93 38-142 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 97.8 0.00055 1.9E-08 43.6 10.4 75 15-91 143-223 (365)
163 2dg1_A DRP35, lactonase; beta 97.8 0.00049 1.7E-08 43.0 9.8 83 7-93 35-122 (333)
164 1jmx_B Amine dehydrogenase; ox 97.8 0.00023 8E-09 44.4 8.3 71 16-93 254-326 (349)
165 1xip_A Nucleoporin NUP159; bet 97.7 0.0003 1E-08 45.8 8.0 70 14-92 86-155 (388)
166 3azo_A Aminopeptidase; POP fam 97.6 0.00063 2.2E-08 46.5 9.3 79 10-90 180-272 (662)
167 3pe7_A Oligogalacturonate lyas 97.6 0.00027 9.2E-09 45.0 6.5 82 8-93 22-112 (388)
168 2oiz_A Aromatic amine dehydrog 97.5 0.00043 1.5E-08 44.3 7.1 90 2-93 34-141 (361)
169 1z68_A Fibroblast activation p 97.5 7.3E-05 2.5E-09 51.6 3.7 69 20-93 19-100 (719)
170 2bkl_A Prolyl endopeptidase; m 97.5 0.00031 1E-08 48.6 6.2 76 14-93 118-212 (695)
171 3fvz_A Peptidyl-glycine alpha- 97.4 0.0077 2.6E-07 37.8 11.6 77 14-91 140-226 (329)
172 2oiz_A Aromatic amine dehydrog 97.4 0.00049 1.7E-08 44.1 5.8 44 2-48 289-335 (361)
173 1q7f_A NHL, brain tumor CG1071 97.3 0.0026 8.9E-08 38.9 8.6 76 14-92 161-238 (286)
174 3pe7_A Oligogalacturonate lyas 97.3 0.00091 3.1E-08 42.5 6.5 47 3-49 64-113 (388)
175 4a5s_A Dipeptidyl peptidase 4 97.3 0.0006 2.1E-08 47.5 5.7 75 17-93 17-102 (740)
176 1jof_A Carboxy-CIS,CIS-muconat 97.2 0.00084 2.9E-08 42.8 5.8 75 18-93 255-342 (365)
177 3e5z_A Putative gluconolactona 97.2 0.0046 1.6E-07 38.0 8.6 78 9-92 20-99 (296)
178 2xdw_A Prolyl endopeptidase; a 97.2 0.002 7E-08 44.6 7.6 74 15-93 123-218 (710)
179 1rwi_B Serine/threonine-protei 97.0 0.01 3.6E-07 35.7 9.2 73 17-93 192-265 (270)
180 2gop_A Trilobed protease; beta 97.0 0.0059 2E-07 38.2 8.2 58 17-80 59-122 (347)
181 2xdw_A Prolyl endopeptidase; a 96.9 0.0033 1.1E-07 43.6 7.0 74 19-92 173-268 (710)
182 1qks_A Cytochrome CD1 nitrite 96.9 0.018 6.2E-07 39.3 10.4 85 2-92 180-275 (567)
183 2bkl_A Prolyl endopeptidase; m 96.9 0.0034 1.2E-07 43.5 6.8 71 20-90 171-259 (695)
184 3c5m_A Oligogalacturonate lyas 96.9 0.013 4.3E-07 37.2 9.0 32 18-49 239-275 (396)
185 3azo_A Aminopeptidase; POP fam 96.9 0.0018 6.1E-08 44.3 5.2 72 15-91 128-225 (662)
186 3no2_A Uncharacterized protein 96.9 0.027 9.3E-07 34.7 10.0 84 2-91 18-107 (276)
187 3e5z_A Putative gluconolactona 96.8 0.021 7.3E-07 35.0 9.5 41 9-49 61-101 (296)
188 3fvz_A Peptidyl-glycine alpha- 96.7 0.051 1.7E-06 34.1 10.4 75 15-92 22-121 (329)
189 2gop_A Trilobed protease; beta 96.5 0.0083 2.8E-07 37.5 5.8 69 14-91 260-330 (347)
190 3dsm_A Uncharacterized protein 96.4 0.05 1.7E-06 34.2 9.3 91 2-93 67-162 (328)
191 2dg1_A DRP35, lactonase; beta 96.4 0.049 1.7E-06 33.9 9.2 64 14-79 84-152 (333)
192 1yr2_A Prolyl oligopeptidase; 96.3 0.0094 3.2E-07 41.7 5.9 71 17-92 163-252 (741)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 96.2 0.092 3.1E-06 32.2 9.6 71 17-91 226-298 (314)
194 3no2_A Uncharacterized protein 96.2 0.071 2.4E-06 32.8 8.7 68 18-91 126-194 (276)
195 3c5m_A Oligogalacturonate lyas 96.1 0.0067 2.3E-07 38.5 4.0 71 19-93 38-112 (396)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 96.1 0.11 3.8E-06 31.8 10.3 79 13-91 14-100 (314)
197 3iuj_A Prolyl endopeptidase; h 96.0 0.021 7.2E-07 39.7 6.3 73 15-92 127-217 (693)
198 2hz6_A Endoplasmic reticulum t 95.9 0.017 5.7E-07 37.1 5.2 60 27-92 8-68 (369)
199 2hz6_A Endoplasmic reticulum t 95.9 0.0055 1.9E-07 39.4 2.8 66 22-93 124-193 (369)
200 3dsm_A Uncharacterized protein 95.8 0.12 4E-06 32.5 8.6 70 18-91 226-301 (328)
201 1rwi_B Serine/threonine-protei 95.8 0.092 3.1E-06 31.5 7.8 72 17-92 150-222 (270)
202 2mad_H Methylamine dehydrogena 95.0 0.38 1.3E-05 31.0 9.2 89 2-93 50-157 (373)
203 1yr2_A Prolyl oligopeptidase; 94.9 0.054 1.9E-06 37.9 5.3 72 20-92 212-303 (741)
204 3sjl_D Methylamine dehydrogena 94.8 0.17 5.7E-06 33.1 7.1 85 7-93 70-170 (386)
205 1qks_A Cytochrome CD1 nitrite 94.4 0.15 5.3E-06 34.9 6.5 62 25-91 164-226 (567)
206 1yiq_A Quinohemoprotein alcoho 94.4 0.19 6.6E-06 35.1 7.0 52 37-93 454-506 (689)
207 3g4e_A Regucalcin; six bladed 93.9 0.62 2.1E-05 28.6 8.2 71 15-92 11-82 (297)
208 1mda_H Methylamine dehydrogena 93.7 0.17 5.8E-06 32.8 5.4 88 3-92 50-158 (368)
209 3hrp_A Uncharacterized protein 93.6 0.2 7E-06 32.6 5.7 71 22-93 176-250 (409)
210 3sjl_D Methylamine dehydrogena 93.6 0.95 3.3E-05 29.6 9.5 68 19-92 139-208 (386)
211 2qe8_A Uncharacterized protein 93.3 0.92 3.1E-05 28.6 8.6 79 14-92 64-154 (343)
212 1kb0_A Quinohemoprotein alcoho 93.2 0.33 1.1E-05 33.9 6.5 51 38-93 457-508 (677)
213 3g4e_A Regucalcin; six bladed 92.7 1 3.4E-05 27.7 7.6 61 17-81 199-262 (297)
214 2ghs_A AGR_C_1268P; regucalcin 92.2 1.3 4.5E-05 27.7 9.0 67 19-92 51-118 (326)
215 3dr2_A Exported gluconolactona 91.6 1.5 5.2E-05 27.0 8.8 36 11-46 80-115 (305)
216 3c75_H MADH, methylamine dehyd 91.5 0.83 2.8E-05 30.3 6.5 84 7-92 110-209 (426)
217 2z2n_A Virginiamycin B lyase; 91.3 1.5 5E-05 26.4 7.9 72 15-92 223-295 (299)
218 2z2n_A Virginiamycin B lyase; 91.2 1.5 5.1E-05 26.3 10.6 74 14-91 12-86 (299)
219 2mad_H Methylamine dehydrogena 91.2 2 6.8E-05 27.7 9.4 64 19-90 127-194 (373)
220 3dr2_A Exported gluconolactona 91.1 1.7 5.8E-05 26.7 9.6 74 11-91 39-115 (305)
221 3iuj_A Prolyl endopeptidase; h 90.3 1.3 4.3E-05 31.0 6.8 72 20-92 178-268 (693)
222 3hrp_A Uncharacterized protein 89.8 2.8 9.7E-05 27.3 8.8 70 17-92 131-203 (409)
223 3pbp_A Nucleoporin NUP82; beta 89.3 0.81 2.8E-05 30.6 4.9 72 16-88 124-208 (452)
224 3pbp_A Nucleoporin NUP82; beta 89.0 3.8 0.00013 27.5 8.7 75 18-93 67-159 (452)
225 1k3i_A Galactose oxidase precu 88.6 4.6 0.00016 28.0 9.4 71 19-92 245-323 (656)
226 1mda_H Methylamine dehydrogena 88.4 3.6 0.00012 26.6 8.0 66 22-92 269-346 (368)
227 1flg_A Protein (quinoprotein e 87.9 3 0.0001 28.7 7.2 52 37-93 465-517 (582)
228 4gq2_M Nucleoporin NUP120; bet 87.2 6.3 0.00022 29.0 8.7 32 18-49 237-268 (950)
229 2qe8_A Uncharacterized protein 85.2 5.2 0.00018 25.1 7.5 77 17-93 17-103 (343)
230 3q7m_A Lipoprotein YFGL, BAMB; 84.2 5.9 0.0002 25.0 8.5 66 27-92 52-122 (376)
231 2ad6_A Methanol dehydrogenase 84.0 5.6 0.00019 27.3 6.9 52 37-93 443-495 (571)
232 3q7m_A Lipoprotein YFGL, BAMB; 83.2 2.6 8.9E-05 26.6 4.9 58 28-89 318-375 (376)
233 1yiq_A Quinohemoprotein alcoho 82.1 2.6 8.9E-05 29.6 4.8 31 23-53 481-511 (689)
234 1w6s_A Methanol dehydrogenase 82.1 8.9 0.0003 26.6 7.3 52 37-93 452-504 (599)
235 2iwa_A Glutamine cyclotransfer 81.4 7.3 0.00025 24.1 8.8 71 19-92 23-95 (266)
236 1fwx_A Nitrous oxide reductase 80.1 5 0.00017 28.0 5.5 75 18-92 278-361 (595)
237 3nol_A Glutamine cyclotransfer 79.1 9.1 0.00031 23.7 9.2 30 19-49 45-76 (262)
238 3hxj_A Pyrrolo-quinoline quino 78.3 7.8 0.00027 23.6 5.8 56 31-91 268-323 (330)
239 2qc5_A Streptogramin B lactona 77.4 9.1 0.00031 22.8 10.5 73 15-91 18-91 (300)
240 3hxj_A Pyrrolo-quinoline quino 77.2 6.9 0.00023 23.9 5.3 66 17-90 177-242 (330)
241 3nok_A Glutaminyl cyclase; bet 77.1 11 0.00037 23.5 8.3 67 19-91 57-124 (268)
242 2ghs_A AGR_C_1268P; regucalcin 76.7 11 0.00038 23.4 8.9 69 18-91 135-209 (326)
243 2xbg_A YCF48-like protein; pho 73.6 14 0.00048 23.1 7.3 70 18-90 251-320 (327)
244 4fhn_B Nucleoporin NUP120; pro 73.4 3 0.0001 31.1 3.2 32 18-49 239-270 (1139)
245 3c75_H MADH, methylamine dehyd 72.9 18 0.00061 24.0 8.5 31 19-49 179-211 (426)
246 1kv9_A Type II quinohemoprotei 72.3 9.4 0.00032 26.7 5.4 52 37-93 437-489 (668)
247 1kb0_A Quinohemoprotein alcoho 71.4 6.2 0.00021 27.7 4.3 33 21-53 481-513 (677)
248 2ece_A 462AA long hypothetical 71.0 21 0.00073 24.1 8.8 89 1-91 230-351 (462)
249 4gq2_M Nucleoporin NUP120; bet 69.5 27 0.00093 25.8 7.3 28 66-93 239-267 (950)
250 1k3i_A Galactose oxidase precu 66.5 28 0.00096 24.2 6.7 70 21-92 190-274 (656)
251 3f7f_A Nucleoporin NUP120; nuc 64.6 13 0.00046 26.6 4.8 29 19-49 224-252 (729)
252 2qc5_A Streptogramin B lactona 62.1 22 0.00076 21.1 10.8 72 16-91 61-133 (300)
253 3nol_A Glutamine cyclotransfer 61.6 26 0.00089 21.7 6.9 68 26-93 134-202 (262)
254 2ad6_A Methanol dehydrogenase 55.7 34 0.0012 23.5 5.6 65 28-92 115-185 (571)
255 3mbr_X Glutamine cyclotransfer 52.6 37 0.0013 20.7 8.2 68 26-93 112-180 (243)
256 2iwa_A Glutamine cyclotransfer 51.9 40 0.0014 20.8 7.7 70 24-93 112-182 (266)
257 4a2l_A BT_4663, two-component 51.0 64 0.0022 22.9 9.6 75 17-92 406-480 (795)
258 3mbr_X Glutamine cyclotransfer 48.2 45 0.0015 20.3 8.2 39 9-49 12-54 (243)
259 1tl2_A L10, protein (tachylect 48.0 45 0.0015 20.4 6.2 67 19-88 90-159 (236)
260 3nok_A Glutaminyl cyclase; bet 48.0 48 0.0016 20.6 7.7 68 26-93 143-211 (268)
261 3f7f_A Nucleoporin NUP120; nuc 47.9 32 0.0011 24.8 4.5 22 72-93 230-251 (729)
262 1w6s_A Methanol dehydrogenase 47.8 44 0.0015 23.3 5.1 62 31-92 124-191 (599)
263 1kv9_A Type II quinohemoprotei 47.5 43 0.0015 23.5 5.1 27 28-54 117-143 (668)
264 2fp8_A Strictosidine synthase; 45.0 52 0.0018 20.2 7.5 75 17-91 19-109 (322)
265 4fhn_B Nucleoporin NUP120; pro 45.0 25 0.00084 26.5 3.7 21 73-93 249-269 (1139)
266 2p4o_A Hypothetical protein; p 43.6 54 0.0018 20.0 9.8 31 17-47 32-62 (306)
267 2ece_A 462AA long hypothetical 43.2 75 0.0026 21.5 7.5 30 19-49 140-175 (462)
268 2xe4_A Oligopeptidase B; hydro 42.6 24 0.00081 25.1 3.3 31 18-48 175-211 (751)
269 3amr_A 3-phytase; beta-propell 39.2 78 0.0027 20.6 7.1 58 27-91 39-107 (355)
270 3qqz_A Putative uncharacterize 28.4 1E+02 0.0036 18.8 8.8 78 10-91 20-99 (255)
271 3sre_A PON1, serum paraoxonase 27.7 83 0.0028 20.3 3.7 31 17-47 221-252 (355)
272 1flg_A Protein (quinoprotein e 27.5 83 0.0028 21.7 3.9 26 28-53 497-522 (582)
273 3das_A Putative oxidoreductase 22.6 1.6E+02 0.0055 18.9 5.7 34 15-48 30-63 (347)
274 4a2l_A BT_4663, two-component 21.4 2.3E+02 0.0077 20.2 9.7 75 17-92 357-436 (795)
275 3mwp_A Nucleoprotein; structur 20.9 33 0.0011 23.2 0.9 17 77-93 161-177 (577)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.76 E-value=6.5e-18 Score=107.76 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=73.5
Q ss_pred Ceeeec---ccC----eEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ---QPC----VTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~---~~~----~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||+ +.. ..+.+|.+.|.+++|+|+++++++++.|+++++||+.++. +......|...|.++++.++
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~----~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV----VLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSS
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEEEEcCcCCceEEEEecCC
Confidence 589998 222 3345899999999999999999999999999999998776 23334468889999998874
Q ss_pred --cEEEEecCCCeEEEeeCChh
Q psy15190 74 --FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 --~~~~s~~~d~~i~iw~~~~~ 93 (117)
.++++++.|++|++||++.+
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSS
T ss_pred CCCceeeecccccccccccccc
Confidence 47899999999999999653
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.74 E-value=1.5e-17 Score=106.69 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=68.8
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCc-ceEeccccEEEEEccCc-EEEEecCCCeEE
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMAR-PQVHGYDLTCLALISTF-VFASGADEKVVR 86 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~ 86 (117)
...+.+|...|.+++|+|+|+++++++.|+++++||+.+++ +... ...|...|.+++|+|++ .+++|+.|++||
T Consensus 262 ~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~----~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 262 SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS----MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE----EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc----EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 45677899999999999999999999999999999998776 2222 23588899999999855 699999999999
Q ss_pred EeeCChh
Q psy15190 87 AFRTTQN 93 (117)
Q Consensus 87 iw~~~~~ 93 (117)
||+++..
T Consensus 338 vw~ip~~ 344 (365)
T 4h5i_A 338 IIKLPLN 344 (365)
T ss_dssp EEECCTT
T ss_pred EEEcCCC
Confidence 9999643
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.73 E-value=3e-17 Score=103.64 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=76.0
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +....+.+|...|.+++|+|+++++++++.|+++++||+.... .......|...|.++++++ +..+
T Consensus 188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc----eeEEEcCCCCceEEEEECCCCCEE
Confidence 578998 6778889999999999999999999999999999999998765 2222345778899999988 4579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++++.|++|++||+...
T Consensus 264 ~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp EEEETTSCEEEEETTTT
T ss_pred EEEeCCCcEEEEeCCCC
Confidence 99999999999999754
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.72 E-value=6.5e-17 Score=102.59 Aligned_cols=89 Identities=22% Similarity=0.363 Sum_probs=75.9
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +....+.+|.+.|.+++|+|+++.+++++.|+++++||++.+. .......|...+.++++.+ +..+
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----EEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----eEEEEcCCcCCEEEEEEcCCCCEE
Confidence 579998 6778889999999999999999999999999999999998775 2222335778899999988 5579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++|+.|++|++||++..
T Consensus 242 ~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 242 ATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EEEETTSCEEEEETTTT
T ss_pred EEEcCCCcEEEEECCCC
Confidence 99999999999999653
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.71 E-value=7.7e-17 Score=102.80 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=73.4
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCC-CEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC--c
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST--F 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~ 74 (117)
|++||+ +++..+.+|...|.+++|+|++ +++++++.|+++++||...+.. .+...|...|.++++++. .
T Consensus 239 v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-----~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-----FRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-----EEECCCSSCEEEEEECSSSTT
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-----EEEcCCCCCEEEEEEeCCCCe
Confidence 579999 7889999999999999999987 5799999999999999987652 123468889999999874 3
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
++++++.|++|++|++..+
T Consensus 314 llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEEETTSCEEEEECCC-
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 6889999999999999654
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.71 E-value=5.6e-17 Score=105.31 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=76.8
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||. +....+.+|.+.|.+++|+|+++++++++.|+++++||+.... .......|...|.++++.+ +..+
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~~l 207 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGDHI 207 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC----EEECCCCCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCCEE
Confidence 579998 6788999999999999999999999999999999999997665 2233346788899999987 4579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++|+.|++|++||+..+
T Consensus 208 ~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 208 VSASRDKTIKMWEVQTG 224 (410)
T ss_dssp EEEETTSEEEEEETTTC
T ss_pred EEEeCCCeEEEEECCCC
Confidence 99999999999999654
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.71 E-value=1.1e-16 Score=101.03 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=74.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 76 (117)
|++||+ +....+.+|...|.+++|+|++..+++++.|+++++||+..+. +......|...|.+++++++ ..+
T Consensus 230 i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 230 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT----CVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE----EEEEEcCCCCcEEEEEECCCCCEE
Confidence 579998 6678889999999999999999999999999999999998775 22233457788999999884 579
Q ss_pred EEecCCCeEEEeeCC
Q psy15190 77 ASGADEKVVRAFRTT 91 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~ 91 (117)
++++.|++|++||.+
T Consensus 306 ~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 306 VSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTCCEEEEECC
T ss_pred EEEeCCCeEEEEeCC
Confidence 999999999999973
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.71 E-value=1.2e-16 Score=100.60 Aligned_cols=88 Identities=23% Similarity=0.366 Sum_probs=74.8
Q ss_pred Ceeeec--------ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc
Q psy15190 1 MLVWAQ--------QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS 72 (117)
Q Consensus 1 v~~w~~--------~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (117)
|++|++ .+...+.+|...|.+++|+|+++++++++.|+++++||+.++. .......|...|.++++.+
T Consensus 42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~----~~~~~~~h~~~v~~~~~~~ 117 (319)
T 3frx_A 42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE----TYQRFVGHKSDVMSVDIDK 117 (319)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECT
T ss_pred EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC----eeEEEccCCCcEEEEEEcC
Confidence 578987 2456788999999999999999999999999999999998776 2233446888899999887
Q ss_pred -CcEEEEecCCCeEEEeeCCh
Q psy15190 73 -TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 73 -~~~~~s~~~d~~i~iw~~~~ 92 (117)
+..+++|+.|++|++||++.
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TSCEEEEEETTSCEEEEETTS
T ss_pred CCCEEEEEeCCCeEEEEECCC
Confidence 45799999999999999864
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.70 E-value=1.5e-16 Score=99.56 Aligned_cols=89 Identities=22% Similarity=0.263 Sum_probs=74.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--CcE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TFV 75 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 75 (117)
|++||+ +....+.+|.+.|.+++|+|+++++++++.|+++++||+..... .......|...+.++++.+ +..
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEEEECCCCCCE
Confidence 579999 67788899999999999999999999999999999999976531 1112235778899999987 358
Q ss_pred EEEecCCCeEEEeeCCh
Q psy15190 76 FASGADEKVVRAFRTTQ 92 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~~ 92 (117)
+++|+.|++|++||+..
T Consensus 156 l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEEETTSEEEEEETTC
T ss_pred EEEEeCCCeEEEEECCC
Confidence 99999999999999854
No 10
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.70 E-value=2.3e-16 Score=100.74 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=68.5
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCc-EEEecCCCCceeeEecCcce-E-eccccEEEEEcc-CcEEEEecCCCe
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQT-TRLHAPFVGKNTWYEMARPQ-V-HGYDLTCLALIS-TFVFASGADEKV 84 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~-~~~wd~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~-~~~~~s~~~d~~ 84 (117)
...+.+|.+.|.+++|+|+++++++++.|++ +++||+.++. +..... . |...|.++++++ +..+++++.|++
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~----~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV----LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC----EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc----EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 7889999999999999999999999999999 9999998776 222222 2 678899999988 457999999999
Q ss_pred EEEeeCCh
Q psy15190 85 VRAFRTTQ 92 (117)
Q Consensus 85 i~iw~~~~ 92 (117)
+++||+..
T Consensus 264 v~iw~~~~ 271 (355)
T 3vu4_A 264 LHVFEIFN 271 (355)
T ss_dssp EEEEESSC
T ss_pred EEEEEccC
Confidence 99999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.70 E-value=2.3e-16 Score=100.88 Aligned_cols=88 Identities=16% Similarity=0.089 Sum_probs=73.5
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCC-CEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--Cc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TF 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 74 (117)
|++||+ ++...+.+|...|.+++|+|++ +++++++.|+++++||+..++.. +...|...|.+++++| +.
T Consensus 251 i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~-----~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 251 VSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF-----RDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp EEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE-----EECCCSSCEEEEEECSSSTT
T ss_pred eeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe-----EECCCCCCEEEEEEeCCCCC
Confidence 578998 7788999999999999999976 57899999999999999876521 1225788899999986 56
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|++|++|++..+
T Consensus 326 ~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEEETTSCEEEEECC--
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 8999999999999999653
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.69 E-value=1.5e-16 Score=99.55 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=75.8
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||. +....+.+|...|.+++|+|+++.+++++.|+++++||+.++. .......|...|.++++.+ +..+
T Consensus 37 v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l 112 (304)
T 2ynn_A 37 VELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTKPYV 112 (304)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc----EEEEEeCCCCcEEEEEEcCCCCEE
Confidence 579999 5678888999999999999999999999999999999998776 2223346788899999988 4579
Q ss_pred EEecCCCeEEEeeCCh
Q psy15190 77 ASGADEKVVRAFRTTQ 92 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~ 92 (117)
++|+.|++|++||+..
T Consensus 113 ~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 113 LSGSDDLTVKLWNWEN 128 (304)
T ss_dssp EEEETTSCEEEEEGGG
T ss_pred EEECCCCeEEEEECCC
Confidence 9999999999999864
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8.8e-17 Score=101.68 Aligned_cols=92 Identities=17% Similarity=0.352 Sum_probs=68.5
Q ss_pred Ceeeec----------ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEE
Q psy15190 1 MLVWAQ----------QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~----------~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~ 70 (117)
|++|+. ++...+.+|.+.|.+++|+|+++++++++.|+++++||+......+........|...|.++++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 578876 2345678999999999999999999999999999999995432111122223457788999999
Q ss_pred cc-CcEEEEecCCCeEEEeeCCh
Q psy15190 71 IS-TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 71 ~~-~~~~~s~~~d~~i~iw~~~~ 92 (117)
.+ +..+++++.|++|++||...
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCCCEEEEEcCCCeEEEEECCC
Confidence 87 55799999999999999753
No 14
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.69 E-value=3.8e-17 Score=105.62 Aligned_cols=89 Identities=18% Similarity=0.087 Sum_probs=72.2
Q ss_pred Ceeeec--------ccCeEEcCCCCCeeEEEECC--------CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccc
Q psy15190 1 MLVWAQ--------QPCVTVGGHFGPVRDIQWEP--------SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYD 64 (117)
Q Consensus 1 v~~w~~--------~~~~~~~~h~~~v~~i~~~~--------~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~ 64 (117)
|++||. .....+.+|.+.|.+++|+| ++++++|++.|+++|+||+.... +......+...
T Consensus 113 v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~----~~~~~~~~~~~ 188 (393)
T 4gq1_A 113 VRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG----PILAGYPLSSP 188 (393)
T ss_dssp EEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE----EEEEEEECSSC
T ss_pred EEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc----eeeeecCCCCC
Confidence 578998 12345679999999999997 78899999999999999997665 22333457788
Q ss_pred cEEEEEccCc--EEEEecCCCeEEEeeCChh
Q psy15190 65 LTCLALISTF--VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 65 i~~~~~~~~~--~~~s~~~d~~i~iw~~~~~ 93 (117)
+.++++.|.+ .+++++.|++|++||+..+
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred cEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 8999998854 6999999999999998653
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.69 E-value=1.7e-16 Score=103.03 Aligned_cols=87 Identities=23% Similarity=0.339 Sum_probs=73.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 76 (117)
|++||+ ++...+.+|...|.+++|+|+++++++++.|+++++||+..+. .......|...|.++++.+++ .+
T Consensus 320 i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~l 395 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR----CMKTLNAHEHFVTSLDFHKTAPYV 395 (410)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC----CCEEEECCSSCEEEEEECSSSSCE
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEEEEcCCCCEE
Confidence 579998 6778889999999999999999999999999999999997665 223334677889999998854 69
Q ss_pred EEecCCCeEEEeeCC
Q psy15190 77 ASGADEKVVRAFRTT 91 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~ 91 (117)
++|+.|++|++|+++
T Consensus 396 ~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 396 VTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEETTSEEEEEC--
T ss_pred EEEeCCCcEEEEeCC
Confidence 999999999999963
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.68 E-value=3.1e-16 Score=100.26 Aligned_cols=89 Identities=13% Similarity=0.186 Sum_probs=70.4
Q ss_pred Ceeeec---c----cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ---Q----PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~---~----~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||+ + ......+|.+.|.+++|+|+++++++++.|+++++||+.++. +......|...+.+++++++
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA----VLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTT
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEccC
Confidence 578998 2 123455899999999999999999999999999999998776 22233457788999998774
Q ss_pred --cEEEEecCCCeEEEeeCChh
Q psy15190 74 --FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 --~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+++++.|++|++||++.+
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~ 214 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKP 214 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSS
T ss_pred CCceeeeeccCCceEEEECCCC
Confidence 46899999999999999653
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.68 E-value=5.9e-16 Score=98.23 Aligned_cols=88 Identities=23% Similarity=0.290 Sum_probs=73.9
Q ss_pred Ceeeec----------ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEE
Q psy15190 1 MLVWAQ----------QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~----------~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~ 70 (117)
|++||+ .+...+.+|...|.+++|+|++.++++++.|+++++||+.++. .......|...|.++++
T Consensus 51 v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~ 126 (343)
T 2xzm_R 51 VMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAF 126 (343)
T ss_dssp EEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEE
T ss_pred EEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEE
Confidence 578987 1346788999999999999999999999999999999998776 22233467889999999
Q ss_pred cc-CcEEEEecCCCeEEEeeCCh
Q psy15190 71 IS-TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 71 ~~-~~~~~s~~~d~~i~iw~~~~ 92 (117)
++ +..+++++.|++|++||+..
T Consensus 127 sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 127 SPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp CSSTTEEEEEETTSCEEEEESSS
T ss_pred CCCCCEEEEEcCCCEEEEEeccC
Confidence 88 45799999999999999853
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.67 E-value=6.9e-16 Score=98.52 Aligned_cols=89 Identities=20% Similarity=0.288 Sum_probs=75.0
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-Cc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TF 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 74 (117)
|++||+ ++...+.+|...|.+++|+| ++..+++++.|+++++||++.+. +......|...|.++++.+ +.
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ----CVQAFETHESDVNSVRYYPSGD 253 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc----EEEEecCCCCCeEEEEEeCCCC
Confidence 579999 67788999999999999988 57899999999999999998776 2222335778899999987 55
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++|+.|+++++||++..
T Consensus 254 ~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 254 AFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCeEEEEECCCC
Confidence 7999999999999999653
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.66 E-value=1e-15 Score=103.70 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=75.2
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEe-c--CcceEeccccEEEEEccC-
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYE-M--ARPQVHGYDLTCLALIST- 73 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~-~--~~~~~~~~~i~~~~~~~~- 73 (117)
|++||. ++...+.+|.+.|.+++|+|+++++++++.|+++++||...+...... . .....|...|.+++++++
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 578998 667889999999999999999999999999999999998776521110 0 011257788999999884
Q ss_pred cEEEEecCCCeEEEeeCChh
Q psy15190 74 FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 ~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+++++.|++|++||+...
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATL 271 (611)
T ss_dssp SEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEeCCCeEEEEeCCCC
Confidence 57999999999999998643
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.65 E-value=1.8e-15 Score=94.39 Aligned_cols=90 Identities=19% Similarity=0.331 Sum_probs=72.5
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS- 72 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 72 (117)
|++|++ ++...+.+|.+.|.+++|+| +++.++|++.|+++++||+..+. +........|...+.++++.+
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR--WSQIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC--BCCCEEECCCSSCEEEEEECCG
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc--eEEEEEeecCCCceeEEEeCcC
Confidence 578987 45788999999999999986 48999999999999999997653 111112234677899999887
Q ss_pred --CcEEEEecCCCeEEEeeCCh
Q psy15190 73 --TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 73 --~~~~~s~~~d~~i~iw~~~~ 92 (117)
+..+++++.|++|++||++.
T Consensus 111 ~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 111 EYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp GGCSEEEEEETTSEEEEEEBCS
T ss_pred CCCcEEEEEECCCcEEEEEecC
Confidence 45899999999999999864
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.65 E-value=1.7e-15 Score=94.65 Aligned_cols=89 Identities=20% Similarity=0.395 Sum_probs=75.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++|+. +....+.+|...|.+++|+|+++.+++++.|+.+++||+..+. .......|...+.++++.+ +..+
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l 122 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK----CLKTLKGHSNYVFCCNFNPQSNLI 122 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCEE
Confidence 578998 6677888999999999999999999999999999999998775 2222345777889999887 5579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++|+.|+.|++||++..
T Consensus 123 ~s~~~d~~i~iwd~~~~ 139 (312)
T 4ery_A 123 VSGSFDESVRIWDVKTG 139 (312)
T ss_dssp EEEETTSCEEEEETTTC
T ss_pred EEEeCCCcEEEEECCCC
Confidence 99999999999999653
No 22
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.64 E-value=8.2e-16 Score=97.76 Aligned_cols=91 Identities=19% Similarity=0.379 Sum_probs=73.4
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-c
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-F 74 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 74 (117)
+++|+. ++...+.+|...|.+++|+|+++++++++.|+++++||+.... ..........|...+.++++.++ .
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-EYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-CEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-CeEEEEEecCcCCCeEEEEECCCCC
Confidence 478987 3567889999999999999999999999999999999997653 11111223357788999999884 4
Q ss_pred EEEEecCCCeEEEeeCCh
Q psy15190 75 VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~ 92 (117)
.+++++.|++|++||...
T Consensus 164 ~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEE 181 (345)
T ss_dssp CEEEEETTSCEEEEEEET
T ss_pred EEEEEeCCCcEEEEEecC
Confidence 699999999999999854
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.63 E-value=1.6e-15 Score=101.30 Aligned_cols=80 Identities=25% Similarity=0.339 Sum_probs=67.6
Q ss_pred cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEE
Q psy15190 8 PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVR 86 (117)
Q Consensus 8 ~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~ 86 (117)
..+.|.||++.|.+++|+|+|+++++++.|+++++||. ++. +......|...|.++++++++ .+++++.|++|+
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~----~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~ 82 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 82 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC----EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCC----EEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 34678999999999999999999999999999999996 343 223345688899999999854 799999999999
Q ss_pred EeeCCh
Q psy15190 87 AFRTTQ 92 (117)
Q Consensus 87 iw~~~~ 92 (117)
+||...
T Consensus 83 vWd~~~ 88 (577)
T 2ymu_A 83 LWNRNG 88 (577)
T ss_dssp EEETTS
T ss_pred EEECCC
Confidence 999754
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.63 E-value=3.1e-15 Score=96.57 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=74.9
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +....+.+|.+.|.+++|+|+++.+++++.|+++++||+..+. .......|...+.++++.+ +..+
T Consensus 121 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 121 IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS----NPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----CCEEEECCSSCEEEEEEETTTTEE
T ss_pred EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc----CceEEcCCCCcEEEEEEcCCCCEE
Confidence 578998 5566667999999999999999999999999999999998765 2223345788899999887 5579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++++.|+.+++||++.+
T Consensus 197 ~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 197 LSASLDGTIRLWECGTG 213 (420)
T ss_dssp EEEETTSCEEEEETTTT
T ss_pred EEEcCCCcEEEeECCCC
Confidence 99999999999999754
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.63 E-value=3.5e-15 Score=94.61 Aligned_cols=93 Identities=10% Similarity=0.157 Sum_probs=76.1
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||. +....+..|...|.+++|+|+++++++++.|+.+++|++...............|...+.++.+.+++.++
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~ 158 (340)
T 1got_B 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV 158 (340)
T ss_dssp EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEE
T ss_pred EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEE
Confidence 579998 56777888999999999999999999999999999999976531111122234577888999998888899
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+++.|++|++||+..+
T Consensus 159 s~s~d~~i~~wd~~~~ 174 (340)
T 1got_B 159 TSSGDTTCALWDIETG 174 (340)
T ss_dssp EEETTSCEEEEETTTT
T ss_pred EEECCCcEEEEECCCC
Confidence 9999999999999654
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.63 E-value=1.9e-15 Score=101.02 Aligned_cols=84 Identities=27% Similarity=0.414 Sum_probs=72.2
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFA 77 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 77 (117)
|++|+. ++...+.+|...|.+++|+|+++++++++.|+++++||.. +. +......|...|.++++++++ .++
T Consensus 491 i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~----~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 491 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ----LLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp EEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC----EEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CC----EEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 578998 7788899999999999999999999999999999999963 43 223344688899999998855 689
Q ss_pred EecCCCeEEEee
Q psy15190 78 SGADEKVVRAFR 89 (117)
Q Consensus 78 s~~~d~~i~iw~ 89 (117)
+++.|++|++||
T Consensus 566 s~~~D~~i~~Wd 577 (577)
T 2ymu_A 566 SASSDKTVKLWN 577 (577)
T ss_dssp EEETTSCEEEEC
T ss_pred EEeCCCEEEEeC
Confidence 999999999997
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.62 E-value=4.9e-15 Score=93.02 Aligned_cols=87 Identities=21% Similarity=0.139 Sum_probs=69.2
Q ss_pred ccCeEEcCCCCCeeEEEECCC-CCEEEEEeCCCcEEEecCCCCce-eeEecCcceEeccccEEEEEccC-cEEEEecCCC
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPS-GQFIISVSEDQTTRLHAPFVGKN-TWYEMARPQVHGYDLTCLALIST-FVFASGADEK 83 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~-~~~~~s~~~d~~~~~wd~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~ 83 (117)
.+..+|+||.+.|.+++|+|+ +++++||+.|+++++||+..... ...+......|...|.++++.++ ..+++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 345689999999999999996 68999999999999999876541 11122223457788999999884 5799999999
Q ss_pred eEEEeeCChh
Q psy15190 84 VVRAFRTTQN 93 (117)
Q Consensus 84 ~i~iw~~~~~ 93 (117)
.+++|+....
T Consensus 109 ~i~~~~~~~~ 118 (340)
T 4aow_A 109 TLRLWDLTTG 118 (340)
T ss_dssp EEEEEETTTT
T ss_pred cceEEeeccc
Confidence 9999998653
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.62 E-value=3.9e-15 Score=94.66 Aligned_cols=90 Identities=21% Similarity=0.336 Sum_probs=71.0
Q ss_pred Ceeeec---c--cC-eEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-C
Q psy15190 1 MLVWAQ---Q--PC-VTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-T 73 (117)
Q Consensus 1 v~~w~~---~--~~-~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~ 73 (117)
|++|+. + .. ....+|...|.+++|+|+++++++++.|+++++||...... ........|...|.++++++ +
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~--~~~~~~~~h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF--ECVTTLEGHENEVKSVAWAPSG 117 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E--EEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe--EEEEEccCCCCCceEEEEeCCC
Confidence 578998 1 11 22368999999999999999999999999999999875531 11222345778899999988 5
Q ss_pred cEEEEecCCCeEEEeeCCh
Q psy15190 74 FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 74 ~~~~s~~~d~~i~iw~~~~ 92 (117)
..+++|+.|++|++||+..
T Consensus 118 ~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SEEEEEETTSCEEEEEECT
T ss_pred CEEEEEECCCeEEEEECCC
Confidence 5799999999999999864
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.62 E-value=4.8e-15 Score=95.32 Aligned_cols=92 Identities=21% Similarity=0.204 Sum_probs=71.7
Q ss_pred Ceeeec----ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEec---CcceEeccccEEEEEcc-
Q psy15190 1 MLVWAQ----QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEM---ARPQVHGYDLTCLALIS- 72 (117)
Q Consensus 1 v~~w~~----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~---~~~~~~~~~i~~~~~~~- 72 (117)
|++||+ +....+.+|.+.|.+++|+|+++.+++++.|+++++||++.+....... .....+...+.++++++
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 579998 5678899999999999999999999999999999999998775211100 00111223478899887
Q ss_pred CcEEEEecCCCeEEEeeCCh
Q psy15190 73 TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 73 ~~~~~s~~~d~~i~iw~~~~ 92 (117)
+..+++|+.|+.|++||...
T Consensus 310 g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp SSEEEEECTTSCEEEEETTT
T ss_pred CCEEEEEECCCCEEEEECCC
Confidence 55799999999999999854
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.61 E-value=4.1e-15 Score=92.75 Aligned_cols=81 Identities=14% Similarity=0.076 Sum_probs=66.6
Q ss_pred eEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc---CcEEEEecCCCeEE
Q psy15190 10 VTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS---TFVFASGADEKVVR 86 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~s~~~d~~i~ 86 (117)
..+.+|.+.|.+++|+|+|+++++++.|+++++||+.... .........|...|.++++.+ +..+++|+.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~--~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC--BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC--cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4567999999999999999999999999999999986432 012223346888999999864 56899999999999
Q ss_pred EeeCCh
Q psy15190 87 AFRTTQ 92 (117)
Q Consensus 87 iw~~~~ 92 (117)
+||+..
T Consensus 81 iWd~~~ 86 (297)
T 2pm7_B 81 IWKEEN 86 (297)
T ss_dssp EEEBSS
T ss_pred EEEcCC
Confidence 999864
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.61 E-value=7.9e-15 Score=92.74 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=65.9
Q ss_pred Ceeeec-----ccCeEE-cC-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCc---eeeEecCcceEeccccEEEEE
Q psy15190 1 MLVWAQ-----QPCVTV-GG-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK---NTWYEMARPQVHGYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~-----~~~~~~-~~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~---~~~~~~~~~~~~~~~i~~~~~ 70 (117)
|++|++ +....+ .+ |...|.+++|+|+++++++++.|+++++||..... ...........|...|.++++
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 115 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW 115 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE
Confidence 578988 123444 44 99999999999999999999999999999985321 111122233467888999999
Q ss_pred ccC-cEEEEecCCCeEEEeeCC
Q psy15190 71 IST-FVFASGADEKVVRAFRTT 91 (117)
Q Consensus 71 ~~~-~~~~s~~~d~~i~iw~~~ 91 (117)
+++ ..+++|+.|++|++||+.
T Consensus 116 sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 116 SNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CTTSCEEEEEETTSCEEEEECC
T ss_pred CCCCCEEEEEeCCCEEEEEecc
Confidence 884 579999999999999994
No 32
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.61 E-value=3.4e-15 Score=93.93 Aligned_cols=90 Identities=18% Similarity=0.350 Sum_probs=71.8
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||+ .....+.+|.+.|.+++|+| ++..++|++.|+++++||+..+. +........|...|.++++.++
T Consensus 37 v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT--WEKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC--CCEEEEECCCSSCCCEEEECCT
T ss_pred EEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc--ceEEEEccCCCCceEEEEECCC
Confidence 579998 24577889999999999986 48999999999999999997653 0111122357788999999874
Q ss_pred ---cEEEEecCCCeEEEeeCCh
Q psy15190 74 ---FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 74 ---~~~~s~~~d~~i~iw~~~~ 92 (117)
..+++|+.|++|++||+..
T Consensus 115 ~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 115 DYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp TTCSCEEEECSSSCEEEEEECS
T ss_pred CCCcEEEEEcCCCCEEEEecCC
Confidence 4799999999999999864
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.60 E-value=1.1e-14 Score=90.94 Aligned_cols=89 Identities=19% Similarity=0.286 Sum_probs=74.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ ++...+.+|...|.++.|+|+++.+++++.|+++++||+..+.. ......|...+.++++.+ +..+
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC----LKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE----EEEecCCCCcEEEEEEcCCCCEE
Confidence 578998 66788899999999999999999999999999999999987652 222234667889999887 4579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++++.|+.|++||+...
T Consensus 165 ~~~~~d~~i~~wd~~~~ 181 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASG 181 (312)
T ss_dssp EEEETTSCEEEEETTTC
T ss_pred EEEeCCCcEEEEECCCC
Confidence 99999999999999653
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.60 E-value=5.3e-15 Score=101.35 Aligned_cols=88 Identities=23% Similarity=0.283 Sum_probs=73.7
Q ss_pred Ceeeec--------ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc
Q psy15190 1 MLVWAQ--------QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS 72 (117)
Q Consensus 1 v~~w~~--------~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (117)
|++|++ .....+.+|...|.+++|+|++++++|++.|+++++||+..+. .......|...|.++++++
T Consensus 407 i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~----~~~~~~~h~~~v~~~~~s~ 482 (694)
T 3dm0_A 407 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV----STRRFVGHTKDVLSVAFSL 482 (694)
T ss_dssp EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECT
T ss_pred EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc----ceeEEeCCCCCEEEEEEeC
Confidence 578988 1245788999999999999999999999999999999998775 2223446888999999988
Q ss_pred C-cEEEEecCCCeEEEeeCCh
Q psy15190 73 T-FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 73 ~-~~~~s~~~d~~i~iw~~~~ 92 (117)
+ ..+++++.|++|++||...
T Consensus 483 ~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 483 DNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp TSSCEEEEETTSCEEEECTTS
T ss_pred CCCEEEEEeCCCEEEEEECCC
Confidence 4 4699999999999999753
No 35
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.60 E-value=1.1e-14 Score=93.96 Aligned_cols=91 Identities=20% Similarity=0.372 Sum_probs=73.1
Q ss_pred Ceeeec----------ccCeEEcCCCCCeeEEEECCCC-CEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEE
Q psy15190 1 MLVWAQ----------QPCVTVGGHFGPVRDIQWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLA 69 (117)
Q Consensus 1 v~~w~~----------~~~~~~~~h~~~v~~i~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~ 69 (117)
|++|++ ++...+.+|...|.+++|+|++ ..+++++.|+++++||+..+....... ...|...+.+++
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~ 183 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--PDVHPDTIYSVD 183 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--TTTCCSCEEEEE
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--cCCCCCceEEEE
Confidence 578988 1367888999999999999997 699999999999999998775222110 024677899999
Q ss_pred EccC-cEEEEecCCCeEEEeeCChh
Q psy15190 70 LIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 70 ~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
+.++ ..+++++.|+.|++||++.+
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTT
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCC
Confidence 9874 46999999999999999754
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.59 E-value=9.8e-15 Score=93.18 Aligned_cols=91 Identities=16% Similarity=0.253 Sum_probs=71.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ ++...+.+|...|.+++|+|++..+++++.|+++++||++....... ... ..+...+.++++++ +..+
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~-~~~-~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI-YSK-ESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-ECC-TTCCSCEEEEEECTTSSEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE-EcC-CCcccceeEEEEeCCCCEE
Confidence 579998 67788899999999999999999999999999999999986641111 000 01223567888887 5579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++|+.|+.|++||+..+
T Consensus 300 ~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKG 316 (354)
T ss_dssp EEEETTSCEEEEETTTC
T ss_pred EEEECCCcEEEEECCCC
Confidence 99999999999998654
No 37
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.59 E-value=1.4e-14 Score=93.43 Aligned_cols=93 Identities=26% Similarity=0.255 Sum_probs=74.5
Q ss_pred Ceeeec-------ccCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceee---EecCcceEeccccEEEE
Q psy15190 1 MLVWAQ-------QPCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTW---YEMARPQVHGYDLTCLA 69 (117)
Q Consensus 1 v~~w~~-------~~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~---~~~~~~~~~~~~i~~~~ 69 (117)
|++|++ +....+.+|.+.|.+++|+| ++..+++++.|+++++||+....... .+......|...+.+++
T Consensus 59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 138 (402)
T 2aq5_A 59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138 (402)
T ss_dssp EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE
T ss_pred EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE
Confidence 468887 24556789999999999999 99999999999999999998763100 12223445788899999
Q ss_pred EccC--cEEEEecCCCeEEEeeCChh
Q psy15190 70 LIST--FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 70 ~~~~--~~~~s~~~d~~i~iw~~~~~ 93 (117)
+.++ ..+++++.|+.|++||+..+
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~ 164 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTG 164 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTT
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCC
Confidence 9885 48999999999999999754
No 38
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.58 E-value=2.3e-14 Score=90.19 Aligned_cols=89 Identities=19% Similarity=0.175 Sum_probs=74.0
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCC------CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPS------GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS 72 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~------~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (117)
|++||+ ++...+.+|...|.+++|.|. +..+++++.|+++++||+.... .......|...+.++++++
T Consensus 131 i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 131 IKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHNSNINTLTASP 206 (319)
T ss_dssp EEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE----EEEEECCCCSCEEEEEECT
T ss_pred EEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch----hheeecCCCCcEEEEEEcC
Confidence 579999 677888999999999999995 4489999999999999998765 2222335788899999988
Q ss_pred C-cEEEEecCCCeEEEeeCChh
Q psy15190 73 T-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 73 ~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
+ ..+++++.|++|++||+...
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCC
Confidence 4 57999999999999999654
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.58 E-value=2.1e-14 Score=89.83 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=69.9
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc---CcEEEEecCCCeE
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS---TFVFASGADEKVV 85 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~s~~~d~~i 85 (117)
...+.+|.+.|.+++|+|+++++++++.|+.+++||+......+........|...|.++++.+ +..+++++.|+.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3567899999999999999999999999999999999865422223333345788899999887 6789999999999
Q ss_pred EEeeCChh
Q psy15190 86 RAFRTTQN 93 (117)
Q Consensus 86 ~iw~~~~~ 93 (117)
++||+..+
T Consensus 84 ~vwd~~~~ 91 (351)
T 3f3f_A 84 KLWEEDPD 91 (351)
T ss_dssp EEEEECTT
T ss_pred EEEecCCC
Confidence 99999653
No 40
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.58 E-value=1.4e-14 Score=91.05 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=70.0
Q ss_pred Ceeeec------ccCeEEcCCCCCeeEEEECCCC----CEEEEEeCCCcEEEecCCCCc-eeeEecCcceEeccccEEEE
Q psy15190 1 MLVWAQ------QPCVTVGGHFGPVRDIQWEPSG----QFIISVSEDQTTRLHAPFVGK-NTWYEMARPQVHGYDLTCLA 69 (117)
Q Consensus 1 v~~w~~------~~~~~~~~h~~~v~~i~~~~~~----~~~~s~~~d~~~~~wd~~~~~-~~~~~~~~~~~~~~~i~~~~ 69 (117)
|++||. ++...+.+|.+.|.+++|+|++ ..+++++.|+++++|++.... ..+ .......|...+.+++
T Consensus 191 v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~-~~~~~~~~~~~v~~v~ 269 (316)
T 3bg1_A 191 IKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTW-SPKLLHKFNDVVWHVS 269 (316)
T ss_dssp CCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCC-BCCEEEECSSCEEEEE
T ss_pred EEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccch-hhhhhhcCCCcEEEEE
Confidence 578988 1456778999999999999986 789999999999999987531 000 0111234667899999
Q ss_pred EccC-cEEEEecCCCeEEEeeCC
Q psy15190 70 LIST-FVFASGADEKVVRAFRTT 91 (117)
Q Consensus 70 ~~~~-~~~~s~~~d~~i~iw~~~ 91 (117)
++++ ..+++++.|+++++|+..
T Consensus 270 ~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 270 WSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ECTTTCCEEEEESSSCEEEEEEC
T ss_pred EcCCCCEEEEEcCCCeEEEEEEC
Confidence 9884 469999999999999975
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.58 E-value=4.9e-15 Score=96.68 Aligned_cols=90 Identities=13% Similarity=0.176 Sum_probs=67.0
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-C
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-T 73 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~ 73 (117)
|++||+ .....+.+|.+.|.+++|+| ++..|+|++.|+++++||+......... ....+...+.++++.+ +
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 221 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA--SSDTINIWFCSLDVSASS 221 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE--CCSSCSCCCCCEEEETTT
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe--ccCCCCccEEEEEECCCC
Confidence 579998 22344568999999999998 7899999999999999999755311110 0011223456778776 5
Q ss_pred cEEEEecCCCeEEEeeCCh
Q psy15190 74 FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 74 ~~~~s~~~d~~i~iw~~~~ 92 (117)
..+++|+.|+.|++||+..
T Consensus 222 ~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp TEEEEECSSSBEEEEESSS
T ss_pred CEEEEEeCCCcEeeeccCc
Confidence 5799999999999999864
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.58 E-value=1.6e-14 Score=98.95 Aligned_cols=92 Identities=16% Similarity=0.233 Sum_probs=74.4
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc---
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 74 (117)
|++||+ +....+.+|...|.+++|+|+++.++|++.|+++++||..... ..........|...+.+++++++.
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 589999 5678889999999999999999999999999999999985442 222222223466779999998753
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|++|++||+...
T Consensus 533 ~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp EEEEEETTSCEEEEETTTC
T ss_pred eEEEEeCCCeEEEEECCCC
Confidence 7999999999999999653
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.58 E-value=6.4e-15 Score=94.73 Aligned_cols=82 Identities=21% Similarity=0.326 Sum_probs=69.4
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeE
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVV 85 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i 85 (117)
.+.+++.+|.+.|.+++|+|++++++|++.|+++++||..++. .......|...+.++++.+ +..+++|+.|+.+
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 4567899999999999999999999999999999999997765 2223345777888999888 4579999999999
Q ss_pred EEeeCCh
Q psy15190 86 RAFRTTQ 92 (117)
Q Consensus 86 ~iw~~~~ 92 (117)
++|++..
T Consensus 133 ~iw~~~~ 139 (380)
T 3iz6_a 133 SIFNLSS 139 (380)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999853
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.58 E-value=2.5e-14 Score=90.40 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=75.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFV 75 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 75 (117)
|++||+ +....+.+|...|.+++|+| ++..+++++.|+.+++||+..+..... ......|...+.++++.+ +..
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI-FGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE-ECSTTSCSSCEEEEEECTTSSE
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE-ecccccccCceeEEEECCCCCE
Confidence 578998 67788889999999999999 999999999999999999987752111 111134778899999987 457
Q ss_pred EEEecCCCeEEEeeCChh
Q psy15190 76 FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~~~ 93 (117)
+++++.|+.|++||+...
T Consensus 176 l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp EEEEETTSCEEEEESCSH
T ss_pred EEEecCCCCEEEEECCCC
Confidence 999999999999999754
No 45
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.58 E-value=3.8e-14 Score=88.94 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=73.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||. +....+.+|.+.|.+++|+|+++++++++.|+++++||+........ ..+...+.++.+.+++.++
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-----LDGGDIINALCFSPNRYWL 271 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE-----EECSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee-----ecCCceEEeeecCCCCcee
Confidence 478998 67788889999999999999999999999999999999987752211 1234568888888888888
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+++.|+.|++||++..
T Consensus 272 ~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 272 CAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEETTEEEEEETTTT
T ss_pred eccCCCEEEEEECCCC
Confidence 8899999999998643
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.1e-14 Score=89.10 Aligned_cols=88 Identities=22% Similarity=0.222 Sum_probs=74.0
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||+ +....+.+|...|.+++|+|++ .+++++.|+.+++||+..+. +......+...+.++++.+++.++
T Consensus 207 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~ 281 (313)
T 3odt_A 207 IKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS----LKQVITLPAISIWSVDCMSNGDII 281 (313)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC----EEEEEECSSSCEEEEEECTTSCEE
T ss_pred EEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc----eeEEEeccCceEEEEEEccCCCEE
Confidence 578998 6778888999999999999998 58899999999999998776 222233466788999999877788
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+++.|+.|++|++..+
T Consensus 282 ~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEETTSCEEEEESCGG
T ss_pred EEeCCCcEEEEeCCCC
Confidence 9999999999999764
No 47
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.57 E-value=2.8e-14 Score=90.54 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=70.1
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFAS 78 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s 78 (117)
|++||. +....+.+|...|.+++|+|+++++++++.|+++++||+.... .......+...+.++++++++.+++
T Consensus 196 i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~----~~~~~~~~~~~v~~v~~sp~~~~la 271 (343)
T 2xzm_R 196 LKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT----YPQREFDAGSTINQIAFNPKLQWVA 271 (343)
T ss_dssp EEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS----SCSEEEECSSCEEEEEECSSSCEEE
T ss_pred EEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc----ccceeecCCCcEEEEEECCCCCEEE
Confidence 478888 5667788999999999999999999999999999999995432 1111122456689999999777777
Q ss_pred ecCCCeEEEeeCCh
Q psy15190 79 GADEKVVRAFRTTQ 92 (117)
Q Consensus 79 ~~~d~~i~iw~~~~ 92 (117)
++.|+.+++|++..
T Consensus 272 ~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 272 VGTDQGVKIFNLMT 285 (343)
T ss_dssp EEESSCEEEEESSS
T ss_pred EECCCCEEEEEeCC
Confidence 77899999999864
No 48
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.57 E-value=1.3e-14 Score=98.29 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=72.8
Q ss_pred Ceeeec-ccCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEE
Q psy15190 1 MLVWAQ-QPCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFA 77 (117)
Q Consensus 1 v~~w~~-~~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 77 (117)
|++||. +....+.+|...|.+++|+|++. .+++++.|+++++||....+ .......|...|.+++++++ ..++
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~----~~~~l~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK----FKSTFGEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE----EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe----EeeeeccccCceEEEEECCCCCEEE
Confidence 356777 66778899999999999999886 59999999999999987654 22233468888999999884 4799
Q ss_pred EecCCCeEEEeeCCh
Q psy15190 78 SGADEKVVRAFRTTQ 92 (117)
Q Consensus 78 s~~~d~~i~iw~~~~ 92 (117)
+++.|++|++||...
T Consensus 207 s~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 207 STGGDGTIVLYNGVD 221 (611)
T ss_dssp EEETTSCEEEEETTT
T ss_pred EEECCCcEEEEECCC
Confidence 999999999999854
No 49
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.56 E-value=8.2e-14 Score=89.92 Aligned_cols=88 Identities=20% Similarity=0.325 Sum_probs=72.4
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--CcE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TFV 75 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 75 (117)
|++||+ +....+.+|...|.+++|+|++..+++++.|+++++||+..+..... ..+...+.++++.+ +..
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT-----LSIEDGVTTVAVSPGDGKY 221 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE-----EECSSCEEEEEECSTTCCE
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE-----EEcCCCcEEEEEECCCCCE
Confidence 579999 66788899999999999999999999999999999999987752211 12345678888776 457
Q ss_pred EEEecCCCeEEEeeCChh
Q psy15190 76 FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~~~ 93 (117)
+++|+.|+.|++||+..+
T Consensus 222 l~~~s~d~~v~iwd~~~~ 239 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETG 239 (393)
T ss_dssp EEEEETTSCEEEEETTTC
T ss_pred EEEEcCCCcEEEEECCCC
Confidence 999999999999998653
No 50
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.56 E-value=4.3e-14 Score=91.24 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=60.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
.|.+++|+|+++++++++.|+++++||+..+. .......|...|.++++.+ +..+++++.|+++++||++.+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK----IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc----EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 38999999999999999999999999998765 2222345778899999987 457999999999999999654
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.55 E-value=3.8e-14 Score=90.76 Aligned_cols=92 Identities=11% Similarity=0.059 Sum_probs=73.5
Q ss_pred Ceeeec---ccCeEEcC-------------CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEec--CcceEe-
Q psy15190 1 MLVWAQ---QPCVTVGG-------------HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEM--ARPQVH- 61 (117)
Q Consensus 1 v~~w~~---~~~~~~~~-------------h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~--~~~~~~- 61 (117)
|++||+ +....+.+ |...|.+++|+|+++++++++.|+.+++||+.......... .....|
T Consensus 260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1sq9_A 260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIE 339 (397)
T ss_dssp EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSG
T ss_pred EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccch
Confidence 578998 66777888 99999999999999999999999999999998776211110 000023
Q ss_pred --------------ccccEEEEEccC-----------cEEEEecCCCeEEEeeCCh
Q psy15190 62 --------------GYDLTCLALIST-----------FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 62 --------------~~~i~~~~~~~~-----------~~~~s~~~d~~i~iw~~~~ 92 (117)
...+.++++.++ ..+++++.|+.|++|++..
T Consensus 340 ~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 340 EDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp GGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred hhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 678999999887 4899999999999999854
No 52
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.3e-14 Score=100.22 Aligned_cols=80 Identities=6% Similarity=-0.092 Sum_probs=65.6
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCcee-----------------------------------------e
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNT-----------------------------------------W 52 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~-----------------------------------------~ 52 (117)
+|...|.+++|+|+++.+++++.|+++++||+..++.. +
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 79999999999999999999999999999998654200 1
Q ss_pred EecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 53 YEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 53 ~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
.+......|...|.++++++++.+++|+.|++|++||+..+
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTT
T ss_pred ceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCC
Confidence 12223345778999999999779999999999999998654
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.55 E-value=5.6e-14 Score=91.90 Aligned_cols=87 Identities=22% Similarity=0.256 Sum_probs=74.2
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||+ ++...+.+|...|.+++|+|+++.+++++.|+++++||+.++. +......|...+.++++. +..++
T Consensus 292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~-~~~l~ 366 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE----LMYTLQGHTALVGLLRLS-DKFLV 366 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEC-SSEEE
T ss_pred EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc----EEEEEeCCCCcEEEEEEc-CCEEE
Confidence 578998 6778888999999999999999999999999999999998776 222333577788888886 56899
Q ss_pred EecCCCeEEEeeCCh
Q psy15190 78 SGADEKVVRAFRTTQ 92 (117)
Q Consensus 78 s~~~d~~i~iw~~~~ 92 (117)
+++.|+.+++||+..
T Consensus 367 s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 367 SAAADGSIRGWDAND 381 (464)
T ss_dssp EEETTSEEEEEETTT
T ss_pred EEeCCCcEEEEECCC
Confidence 999999999999965
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.55 E-value=1.8e-14 Score=93.97 Aligned_cols=91 Identities=12% Similarity=0.155 Sum_probs=72.8
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +.+..+.+|...|.+++|+|++. .+++++.|+++++||++...... .......|...|.++++++ +..+
T Consensus 233 i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 233 VILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp EEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEE
T ss_pred EeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCee
Confidence 578998 67788889999999999999765 78899999999999997654110 1112235778899999887 4579
Q ss_pred EEecCCCeEEEeeCCh
Q psy15190 77 ASGADEKVVRAFRTTQ 92 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~ 92 (117)
++++.|+.|++||+..
T Consensus 312 ~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQ 327 (435)
T ss_dssp EEEESSSCEEEEESSS
T ss_pred EEEcCCCEEEEEECCC
Confidence 9999999999999864
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.54 E-value=6.4e-14 Score=87.61 Aligned_cols=93 Identities=16% Similarity=0.269 Sum_probs=73.4
Q ss_pred Ceeeec-------ccCeEEcCCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCc-----eeeEecCcceEeccccE
Q psy15190 1 MLVWAQ-------QPCVTVGGHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGK-----NTWYEMARPQVHGYDLT 66 (117)
Q Consensus 1 v~~w~~-------~~~~~~~~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~-----~~~~~~~~~~~~~~~i~ 66 (117)
|++|++ +....+.+|...|.+++|+| ++.++++++.|+++++||+..+. ..+.+......|...+.
T Consensus 35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY 114 (351)
T ss_dssp EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence 578988 24566789999999999999 59999999999999999997653 11122223335678899
Q ss_pred EEEEcc---CcEEEEecCCCeEEEeeCChh
Q psy15190 67 CLALIS---TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 67 ~~~~~~---~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++++.+ +..+++++.|+.|++||++..
T Consensus 115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 115 SVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp EEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred EEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 999887 457999999999999998654
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.3e-14 Score=90.52 Aligned_cols=88 Identities=17% Similarity=0.305 Sum_probs=74.0
Q ss_pred Ceeeec----ccCeEEc-CCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-
Q psy15190 1 MLVWAQ----QPCVTVG-GHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST- 73 (117)
Q Consensus 1 v~~w~~----~~~~~~~-~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 73 (117)
|++||+ ++...+. +|...|.+++|+| ++.++++++.|+++++||+..+. +......|...+.+++++++
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~----~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE----QLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC----EEEEEECSSSCCCCEEECTTC
T ss_pred EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc----cceeecCCCCceEEEEECCCC
Confidence 578998 4567777 8999999999999 99999999999999999998775 22333456778999999884
Q ss_pred -cEEEEecCCCeEEEeeCCh
Q psy15190 74 -FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 74 -~~~~s~~~d~~i~iw~~~~ 92 (117)
..+++++.|+.|++|++..
T Consensus 318 ~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 318 PDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp TTEEEECCSSSEEEEEESCC
T ss_pred CCEEEEEecCCcEEEEEccC
Confidence 5899999999999999864
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.54 E-value=9.2e-14 Score=93.10 Aligned_cols=80 Identities=9% Similarity=-0.034 Sum_probs=63.4
Q ss_pred eEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEE--EccC--cEEEEecCCCeE
Q psy15190 10 VTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLA--LIST--FVFASGADEKVV 85 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~--~~~~s~~~d~~i 85 (117)
..+.+|...|.+++|+++ ..+++|+.|+++++||+..+.. +......|...|.+++ +.++ ..+++++.|+++
T Consensus 260 ~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tv 335 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYF 335 (524)
T ss_dssp EEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEE
T ss_pred EEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeE
Confidence 367889999999999985 4899999999999999976531 1112346788899984 4553 579999999999
Q ss_pred EEeeCChh
Q psy15190 86 RAFRTTQN 93 (117)
Q Consensus 86 ~iw~~~~~ 93 (117)
++||++..
T Consensus 336 klWD~~~~ 343 (524)
T 2j04_B 336 YIFNPKDI 343 (524)
T ss_dssp EEECGGGH
T ss_pred EEEECCCC
Confidence 99999754
No 58
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.4e-14 Score=88.52 Aligned_cols=89 Identities=7% Similarity=-0.043 Sum_probs=68.2
Q ss_pred Ceeeec---ccCeEEcC-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceE-eccccEEEEEccCc-
Q psy15190 1 MLVWAQ---QPCVTVGG-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQV-HGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~- 74 (117)
|++||+ +....... |...+.+++|+|++.++++++.|+.+++||++.+.... ..... |...|.++++++++
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~ 227 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGY 227 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC---EECCCCTTSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc---cEEeccCCCCEEEEEEeCCCC
Confidence 578998 44444433 45579999999999999999999999999998776210 12223 77889999998854
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++ |+.|++||++..
T Consensus 228 ~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 228 WMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp EEEEEE-SSBEEEEETTSS
T ss_pred EEEEEe-CCeEEEEEcCCC
Confidence 677888 559999999764
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.53 E-value=8.8e-14 Score=90.98 Aligned_cols=88 Identities=18% Similarity=0.339 Sum_probs=73.5
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc---Cc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS---TF 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~ 74 (117)
|++||. +....+.+|.+.|.+++|+|++ .+++++.|+++++||+.++. .......|...+.++++.+ +.
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~ 218 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC----CTHVFEGHNSTVRCLDIVEYKNIK 218 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEEESSSCE
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc----EEEEECCCCCccEEEEEecCCCCC
Confidence 579998 7788889999999999999977 99999999999999998776 2222335778899998763 35
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++|+.|+.+++||+...
T Consensus 219 ~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 219 YIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp EEEEEETTSCEEEEECCCC
T ss_pred EEEEEcCCCcEEEeeCCCC
Confidence 7999999999999999653
No 60
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.53 E-value=4.8e-14 Score=94.52 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=73.2
Q ss_pred Ceeeec---ccCeEEcC-CCCCeeEEEECC----------CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccE
Q psy15190 1 MLVWAQ---QPCVTVGG-HFGPVRDIQWEP----------SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLT 66 (117)
Q Consensus 1 v~~w~~---~~~~~~~~-h~~~v~~i~~~~----------~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~ 66 (117)
|++|++ +....+.+ |...|.+++|+| +++++++++.|+++++||+..... +......|...|.
T Consensus 512 i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~h~~~v~ 588 (615)
T 1pgu_A 512 ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK---IIKALNAHKDGVN 588 (615)
T ss_dssp EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC---CEEETTSSTTCEE
T ss_pred EEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCce---echhhhcCccceE
Confidence 578998 56667777 999999999999 999999999999999999987621 1222335778899
Q ss_pred EEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 67 CLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 67 ~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
++++++++.+++++.|+.|++|++..
T Consensus 589 ~l~~s~~~~l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 589 NLLWETPSTLVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEC-
T ss_pred EEEEcCCCCeEEecCCceEEEEeeec
Confidence 99998865699999999999999853
No 61
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=86.03 Aligned_cols=92 Identities=12% Similarity=0.182 Sum_probs=67.1
Q ss_pred Ceeeec---ccCeEE--cCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeE------------ecC-------
Q psy15190 1 MLVWAQ---QPCVTV--GGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWY------------EMA------- 56 (117)
Q Consensus 1 v~~w~~---~~~~~~--~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~------------~~~------- 56 (117)
|++||. ++.+.+ .+|...|.+++|+|+++++++|+.|+++++||+.+++.... ...
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~ 126 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGS 126 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEe
Confidence 589998 455555 46778899999999999999999999999999987651000 000
Q ss_pred ------------------cceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCCh
Q psy15190 57 ------------------RPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 57 ------------------~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~ 92 (117)
....|...+.++.+.+ +..+++++.|++|++||+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 127 RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred cCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 0112334455666555 55799999999999999864
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.52 E-value=1.1e-13 Score=87.42 Aligned_cols=88 Identities=17% Similarity=0.311 Sum_probs=72.4
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEE--ccC
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLAL--IST 73 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~ 73 (117)
|++|++ .....+.+|...|.+++|+|+++++++++.|+.+++||+...... ....|...+.++++ .++
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI-----QIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----EEEECSSCEEEEEEEECSS
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce-----eeccccCceEEEEEEeCCC
Confidence 578998 223677889999999999999999999999999999999877521 12357788999998 665
Q ss_pred c-EEEEecCCCeEEEeeCChh
Q psy15190 74 F-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 ~-~~~s~~~d~~i~iw~~~~~ 93 (117)
+ .+++++.|+.|++||++..
T Consensus 141 ~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 141 YSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp CEEEEEEETTSEEEEECSSCS
T ss_pred CCEEEEccCCCcEEEEECCCC
Confidence 4 5999999999999999653
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.52 E-value=1.9e-14 Score=91.83 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=68.1
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-c
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-F 74 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 74 (117)
|++|+. +....+.+|...|.+++|+|+++++++++.|+++++||+.... .+.+......|...+.++++.++ .
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~ 113 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-TWKQTLVLLRLNRAATFVRWSPNED 113 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------CCCCEEECCCCSSCEEEEECCTTSS
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-ceeeeeEecccCCceEEEEECCCCC
Confidence 578888 3567788999999999999999999999999999999997653 11111222347788999998874 4
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|+.|++||+...
T Consensus 114 ~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp CCEEEESSSCEEECCC---
T ss_pred EEEEEecCCeEEEEEECCc
Confidence 6999999999999999654
No 64
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.52 E-value=3.9e-14 Score=92.87 Aligned_cols=78 Identities=14% Similarity=0.144 Sum_probs=64.2
Q ss_pred eEEcCCCCCeeEEEECCC-CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEE
Q psy15190 10 VTVGGHFGPVRDIQWEPS-GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRA 87 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~-~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~i 87 (117)
..+.+|...|.+++|+|+ +..+++++.|+++++||++...... ....|...+.++++++ +..+++|+.|+.|++
T Consensus 143 ~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~----~~~~~~~~v~~v~wspdg~~lasgs~dg~v~i 218 (434)
T 2oit_A 143 KLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC----ATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQ 218 (434)
T ss_dssp ECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE----EEECGGGCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee----eccCCCCceeEEEEcCCCCEEEEEcCCCcEEE
Confidence 556679999999999997 8899999999999999998764211 1223567899999987 446999999999999
Q ss_pred eeCC
Q psy15190 88 FRTT 91 (117)
Q Consensus 88 w~~~ 91 (117)
||.+
T Consensus 219 wd~~ 222 (434)
T 2oit_A 219 YLPT 222 (434)
T ss_dssp ECTT
T ss_pred EccC
Confidence 9986
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=3.9e-14 Score=94.89 Aligned_cols=89 Identities=9% Similarity=0.043 Sum_probs=69.1
Q ss_pred Ceeeec----ccCeEEcCCCCCeeEE--EECCCC-CEEEEEeCCCcEEEecCCCCceeeEecCcceEec--cccEEEEEc
Q psy15190 1 MLVWAQ----QPCVTVGGHFGPVRDI--QWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHG--YDLTCLALI 71 (117)
Q Consensus 1 v~~w~~----~~~~~~~~h~~~v~~i--~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~--~~i~~~~~~ 71 (117)
|++||+ .+...+.+|.+.|.++ .|+|++ .+++|++.|+++++||++... +......|. ..+.+++++
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~----~~~~~~~~~~~~~v~~v~fs 364 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA----TTKTTVSRFRGSNLVPVVYC 364 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH----HHCEEEEECSCCSCCCEEEE
T ss_pred EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC----cccccccccccCcccceEeC
Confidence 579999 2355688999999999 567787 899999999999999997654 112222333 246788988
Q ss_pred c-CcEEEEecCCCeEEEeeCChh
Q psy15190 72 S-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 72 ~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+ +..+++++.|+++++||++..
T Consensus 365 p~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 365 PQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp TTTTEEEEECSSSEEEEEETTCT
T ss_pred CCcCeEEEeCCCCcEEEEECccc
Confidence 8 557999999999999998754
No 66
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.52 E-value=1.3e-13 Score=89.61 Aligned_cols=87 Identities=10% Similarity=0.226 Sum_probs=69.8
Q ss_pred Ceeeec---ccCeEE--cCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcE
Q psy15190 1 MLVWAQ---QPCVTV--GGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFV 75 (117)
Q Consensus 1 v~~w~~---~~~~~~--~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 75 (117)
|++||. ++...+ .+|...|.+++|+|+|+++++|+.|+++++||+.++. .......|...+.++++. +..
T Consensus 127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~----~~~~~~~h~~~v~~~s~~-~~~ 201 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----RLRNMTSHSARVGSLSWN-SYI 201 (420)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEE-TTE
T ss_pred EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc----EEEEEeCCCCceEEEeeC-CCE
Confidence 589998 444444 4677889999999999999999999999999998776 222233567777887764 568
Q ss_pred EEEecCCCeEEEeeCCh
Q psy15190 76 FASGADEKVVRAFRTTQ 92 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~~ 92 (117)
+++|+.|+.+++||...
T Consensus 202 l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp EEEEETTSEEEEEETTS
T ss_pred EEEEeCCCceeEeeecc
Confidence 99999999999999854
No 67
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.51 E-value=1.4e-13 Score=85.68 Aligned_cols=87 Identities=18% Similarity=0.273 Sum_probs=68.7
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEe--CCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVS--EDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FV 75 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~--~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 75 (117)
|++|+. ........+...+..+.|+|.+..+++++ .|+.+++||+.++. +......|...|.+++++++ ..
T Consensus 223 i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~----~~~~l~gH~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 223 IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----KVAELKGHTSRVLSLTMSPDGAT 298 (318)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSC
T ss_pred EEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCE
Confidence 468888 33333445778899999999888877654 79999999998776 33334468889999999884 46
Q ss_pred EEEecCCCeEEEeeCC
Q psy15190 76 FASGADEKVVRAFRTT 91 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~ 91 (117)
+++|+.|++|++||+.
T Consensus 299 l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 299 VASAAADETLRLWRCF 314 (318)
T ss_dssp EEEEETTTEEEEECCS
T ss_pred EEEEecCCeEEEEECC
Confidence 9999999999999985
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.50 E-value=1.6e-13 Score=87.80 Aligned_cols=92 Identities=12% Similarity=0.097 Sum_probs=73.5
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-C-cE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-T-FV 75 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~ 75 (117)
|++||+ +....+.+|...|.+++|+|+++ .+++++.|+++++||+.......... ....|...+.++++++ + ..
T Consensus 187 i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 187 LLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI-AEMPHEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp EEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE-EEEECSSCEEEEEECTTTSCE
T ss_pred EEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE-EEecCCCceEEEEEcCCCCCE
Confidence 478998 67788889999999999999998 89999999999999998632000011 1124778899999887 4 47
Q ss_pred EEEecCCCeEEEeeCChh
Q psy15190 76 FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~~~ 93 (117)
+++++.|+.|++||++..
T Consensus 266 l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 266 LLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEEEESSSEEEEEETTBT
T ss_pred EEEEcCCCcEEEEECCCC
Confidence 999999999999999654
No 69
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.4e-13 Score=92.63 Aligned_cols=91 Identities=10% Similarity=0.103 Sum_probs=69.6
Q ss_pred Ceeeec-ccCeEEcCCCC-----CeeEEEECCCCCEEEEEeCCCcEEEecCCCCce------eeEec-CcceEeccccEE
Q psy15190 1 MLVWAQ-QPCVTVGGHFG-----PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKN------TWYEM-ARPQVHGYDLTC 67 (117)
Q Consensus 1 v~~w~~-~~~~~~~~h~~-----~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~------~~~~~-~~~~~~~~~i~~ 67 (117)
|++|+. .+...+. |.. .+.+++|+|+|+++++|+.|+++++||+..+.. ..... ....+|...|.+
T Consensus 109 V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 109 VSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp EEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred EEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 468887 5455555 665 499999999999999999999999999986641 11110 001235578999
Q ss_pred EEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 68 LALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 68 ~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+++++++ +++++.|+++++|++..+
T Consensus 188 VawSPdg-Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 188 IVWYEDV-LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp EEEETTE-EEEEETTCCEEEECCCSS
T ss_pred EEEcCCc-EEEEeCCCeEEEEECCCC
Confidence 9999988 899999999999999654
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.4e-13 Score=86.22 Aligned_cols=91 Identities=20% Similarity=0.355 Sum_probs=73.5
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCC--CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPS--GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~--~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++|++ +....+.+|...|.+++|+++ +.++++++.|+.+++||+..+. +........|...+.++++.+.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~ 112 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPH 112 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCG
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc--eeEeeeecCCCcceEEEEeCCC
Confidence 578988 456778899999999999986 9999999999999999997664 1112222346778999998874
Q ss_pred ---cEEEEecCCCeEEEeeCChh
Q psy15190 74 ---FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 ---~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+++++.|+.|++||+...
T Consensus 113 ~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 113 EYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp GGCSEEEEEETTSEEEEEECCTT
T ss_pred CCCCEEEEecCCCcEEEEecCCC
Confidence 57999999999999999654
No 71
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.3e-13 Score=85.27 Aligned_cols=81 Identities=14% Similarity=0.331 Sum_probs=68.4
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEE
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRA 87 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~i 87 (117)
...+.+|.+.|.+++|+|+++++++++.|+.+++||+..+. .......|...+.++++.+ +..+++++.|+.|++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE----RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch----hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 45678999999999999999999999999999999998776 2222335778899999987 557999999999999
Q ss_pred eeCChh
Q psy15190 88 FRTTQN 93 (117)
Q Consensus 88 w~~~~~ 93 (117)
||+..+
T Consensus 101 wd~~~~ 106 (369)
T 3zwl_B 101 WDVSNG 106 (369)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 998653
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.49 E-value=8.5e-14 Score=90.44 Aligned_cols=90 Identities=7% Similarity=0.047 Sum_probs=70.4
Q ss_pred Ceeeec---ccCeEEcC--CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc---
Q psy15190 1 MLVWAQ---QPCVTVGG--HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--- 72 (117)
Q Consensus 1 v~~w~~---~~~~~~~~--h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 72 (117)
|++||+ ++...+.+ |.+.|.+++|+|++..+++++.|+++++||++.+....... ..+...+.++++.+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~s 270 (437)
T 3gre_A 194 VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS---FGDHAPITHVEVCQFYG 270 (437)
T ss_dssp EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB---CTTCEEEEEEEECTTTC
T ss_pred EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe---cCCCCceEEEEeccccC
Confidence 578999 66778887 88999999999999999999999999999998765111100 02445678886543
Q ss_pred -Cc-EEEEecCCCeEEEeeCChh
Q psy15190 73 -TF-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 73 -~~-~~~s~~~d~~i~iw~~~~~ 93 (117)
++ .+++|+.|+.|++||+...
T Consensus 271 ~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 271 KNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp TTEEEEEEESTTEEEEEEETTTT
T ss_pred CCccEEEEEcCCCcEEEEEcCCC
Confidence 33 6999999999999999754
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.49 E-value=1.5e-13 Score=89.33 Aligned_cols=87 Identities=18% Similarity=0.225 Sum_probs=69.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEe--CCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVS--EDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~--~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 74 (117)
|++||+ ++...+.. ...+.++.|+|++..+++++ .|+.+++||+.++. +.....+|...|.++++++++
T Consensus 303 I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~----~v~~l~gH~~~V~~l~~spdg~ 377 (420)
T 4gga_A 303 IRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----KVAELKGHTSRVLSLTMSPDGA 377 (420)
T ss_dssp EEEEETTTTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEeCCccccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCC
Confidence 578998 45555544 45688899999999887765 79999999998776 333445688999999999854
Q ss_pred EEEEecCCCeEEEeeCCh
Q psy15190 75 VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~ 92 (117)
.++||+.|++|++||+..
T Consensus 378 ~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 378 TVASAAADETLRLWRCFE 395 (420)
T ss_dssp CEEEEETTTEEEEECCSC
T ss_pred EEEEEecCCeEEEEECCC
Confidence 699999999999999853
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.49 E-value=2.2e-13 Score=86.87 Aligned_cols=92 Identities=10% Similarity=0.081 Sum_probs=71.2
Q ss_pred Ceeeec---c---cCeEEcC-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCce--------------eeEecCcce
Q psy15190 1 MLVWAQ---Q---PCVTVGG-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKN--------------TWYEMARPQ 59 (117)
Q Consensus 1 v~~w~~---~---~~~~~~~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~--------------~~~~~~~~~ 59 (117)
|++||+ + ....+.+ |...|.+++|+|+++.+++++.|+++++||+..... ........
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 478988 2 4678888 999999999999999999999999999999853220 11111222
Q ss_pred EeccccEEEEEccCc-EEEEecCCCeEEEeeCChh
Q psy15190 60 VHGYDLTCLALISTF-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 60 ~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~~~ 93 (117)
.|...+.++++++++ .+++++.|+.|++||+...
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 567789999998854 6999999999999999764
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.7e-13 Score=95.01 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=66.4
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeE-ecCcce-EeccccEEEEEc-----cC----cEEE
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWY-EMARPQ-VHGYDLTCLALI-----ST----FVFA 77 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~-~~~~~~-~~~~~i~~~~~~-----~~----~~~~ 77 (117)
...+.+|.+.|.+++|+|+| ++++|+.|+++++||+........ ...... .|...|.+++|+ ++ ..++
T Consensus 568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~ 646 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMV 646 (902)
T ss_dssp EEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEE
T ss_pred eEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEE
Confidence 46778899999999999999 999999999999999876543221 112232 677889999999 76 3799
Q ss_pred EecCCCeEEEeeC
Q psy15190 78 SGADEKVVRAFRT 90 (117)
Q Consensus 78 s~~~d~~i~iw~~ 90 (117)
+|+.|++|++||+
T Consensus 647 sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 647 CGTDMGEVITYKI 659 (902)
T ss_dssp EEETTSEEEEEEE
T ss_pred EEecCCcEEEEEE
Confidence 9999999999998
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.48 E-value=2.6e-13 Score=97.57 Aligned_cols=89 Identities=15% Similarity=0.324 Sum_probs=75.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC---c
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST---F 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~ 74 (117)
|++||. +....+.+|.+.|.+++|+|+++++++++.|+++++||+.++. .......|...+.++++.++ .
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK----LVHTYDEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSCC
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEEEEecCCCce
Confidence 578999 6678889999999999999999999999999999999998776 22233457788999998773 3
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++|+.|+.|++||+..+
T Consensus 715 ~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp EEEEEETTSCEEEEETTSS
T ss_pred EEEEEeCCCeEEEEECCCc
Confidence 6899999999999999754
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.47 E-value=2.8e-13 Score=84.04 Aligned_cols=88 Identities=22% Similarity=0.339 Sum_probs=73.6
Q ss_pred Ceeeec-ccCeEEcC-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEE
Q psy15190 1 MLVWAQ-QPCVTVGG-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFAS 78 (117)
Q Consensus 1 v~~w~~-~~~~~~~~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s 78 (117)
|++||. +....+.. |...+.+++|+|++. +++++.|+.+++||+..+. +......|...+.++++.+++.+++
T Consensus 167 i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 167 IKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD----VLRTYEGHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp EEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECTTSCEEE
T ss_pred EEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh----hhhhhhcCCceEEEEEEecCCCEEE
Confidence 468888 66677777 889999999999888 8999999999999998776 2223345778899999998778999
Q ss_pred ecCCCeEEEeeCChh
Q psy15190 79 GADEKVVRAFRTTQN 93 (117)
Q Consensus 79 ~~~d~~i~iw~~~~~ 93 (117)
++.|+.|++||+...
T Consensus 242 ~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 242 CGEDRTVRIWSKENG 256 (313)
T ss_dssp EETTSEEEEECTTTC
T ss_pred EecCCEEEEEECCCC
Confidence 999999999998654
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.47 E-value=3e-13 Score=93.50 Aligned_cols=88 Identities=19% Similarity=0.247 Sum_probs=75.1
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 76 (117)
|++||. +....+.+|.+.|.+++|+|+++.+++++.|+.+++||+.++. .......|...+.++++++++ .+
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----EEEEEecCCCCEEEEEEeCCCCEE
Confidence 578998 6778888999999999999999999999999999999998776 222234577889999998855 79
Q ss_pred EEecCCCeEEEeeCCh
Q psy15190 77 ASGADEKVVRAFRTTQ 92 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~ 92 (117)
++++.|+.+++||+..
T Consensus 113 ~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWEN 128 (814)
T ss_dssp EEEETTSEEEEEEGGG
T ss_pred EEEcCCCEEEEEECCC
Confidence 9999999999999854
No 79
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=4.5e-13 Score=85.00 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=73.7
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECC-------------CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEec
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEP-------------SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHG 62 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~-------------~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~ 62 (117)
|++||+ .....+.+|...|.+++|+| ++..+++++.|+.+++||+......+........|.
T Consensus 127 i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 127 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 478998 23446678999999999999 699999999999999999976542333233334577
Q ss_pred cccEEEEEccC----cEEEEecCCCeEEEeeCChh
Q psy15190 63 YDLTCLALIST----FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 63 ~~i~~~~~~~~----~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+.+++++++ ..+++++.|+.|++||+...
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 88999999886 46999999999999998653
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.47 E-value=8e-13 Score=84.88 Aligned_cols=89 Identities=20% Similarity=0.300 Sum_probs=74.8
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||+ +....+.+|...|.+++|+|+++.+++++.|+.+++||+.... .......+...+.++++.+++.++
T Consensus 229 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~l~ 304 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN----SQNCFYGHSQSIVSASWVGDDKVI 304 (425)
T ss_dssp EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS----CSEEECCCSSCEEEEEEETTTEEE
T ss_pred EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc----cceEecCCCccEEEEEECCCCEEE
Confidence 468888 6677888999999999999999999999999999999998765 222223467788999998877999
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+++.|+.+++||+...
T Consensus 305 ~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQN 320 (425)
T ss_dssp EEETTSEEEEEETTTT
T ss_pred EEeCCCcEEEEECCCC
Confidence 9999999999999653
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.46 E-value=6.7e-13 Score=85.25 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=73.0
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +....+.+|...|.+++|+|++ .+++++.|+.+++||+..+. .......+...+.++++++ +..+
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT----LLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE----EEEEEECTTCCEEEEEECTTSSEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc----EeEecccCCccEEEEEEcCCCCEE
Confidence 478998 6778888999999999999999 99999999999999998775 2222234567889999887 4579
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++++.|+.|++||+...
T Consensus 346 ~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp EEEETTSCEEEEECHHH
T ss_pred EEEECCCeEEEEECCCC
Confidence 99999999999999653
No 82
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.46 E-value=1.1e-12 Score=84.64 Aligned_cols=92 Identities=21% Similarity=0.205 Sum_probs=68.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEE----------
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTC---------- 67 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~---------- 67 (117)
|++||+ +....+.+|...|.+++|+|+++.+++++.|+++++||+..+..... ......+...+.+
T Consensus 163 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT-FNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp EEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE-ECBTTBTTCCEEEEEEEECCCSS
T ss_pred EEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE-eecCCCCCCCccEEEEecCCcce
Confidence 579998 67788899999999999999999999999999999999987752111 1111112233333
Q ss_pred -----------EEEccC-cEEEEecCCCeEEEeeCChh
Q psy15190 68 -----------LALIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 68 -----------~~~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
++++++ ..+++|+.|+.|++||++..
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 344453 36999999999999999653
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.46 E-value=5.1e-13 Score=85.53 Aligned_cols=89 Identities=12% Similarity=0.181 Sum_probs=72.8
Q ss_pred Ceeeec---ccCeEEcC---C---CCCeeEEEECCCCCEEEEEeCC---CcEEEecCCCCceeeEecCcceE--------
Q psy15190 1 MLVWAQ---QPCVTVGG---H---FGPVRDIQWEPSGQFIISVSED---QTTRLHAPFVGKNTWYEMARPQV-------- 60 (117)
Q Consensus 1 v~~w~~---~~~~~~~~---h---~~~v~~i~~~~~~~~~~s~~~d---~~~~~wd~~~~~~~~~~~~~~~~-------- 60 (117)
|++||+ +....+.. | ...|.+++|+|++.++++++.| +.+++||+....... ....
T Consensus 209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~----~~~~~~~~~~~~ 284 (397)
T 1sq9_A 209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG----SLSVPTHSSQAS 284 (397)
T ss_dssp EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE----EECBC-------
T ss_pred EEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc----eeccCccccccc
Confidence 578998 66777788 8 9999999999999999999999 999999998775211 1223
Q ss_pred -----eccccEEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 61 -----HGYDLTCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 61 -----~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
|...+.++++.+ +..+++++.|+.|++||+...
T Consensus 285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 677899999987 557999999999999999654
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.46 E-value=9.3e-13 Score=85.03 Aligned_cols=89 Identities=15% Similarity=0.238 Sum_probs=72.0
Q ss_pred Ceeeec----ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--Cc
Q psy15190 1 MLVWAQ----QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TF 74 (117)
Q Consensus 1 v~~w~~----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 74 (117)
|++||+ .....+.+|.+.|.+++|+|++..+++++.|+.+++||+....... ....+...+.++++.+ ..
T Consensus 198 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 198 IHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF----TKTNHNAAVKAVAWCPWQSN 273 (401)
T ss_dssp EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE----EECCCSSCCCEEEECTTSTT
T ss_pred EEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE----EecCCcceEEEEEECCCCCC
Confidence 468888 4567788999999999999999999999999999999998765222 2234677899999887 34
Q ss_pred EEEEec--CCCeEEEeeCChh
Q psy15190 75 VFASGA--DEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~--~d~~i~iw~~~~~ 93 (117)
++++++ .|+.|++||+...
T Consensus 274 ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 274 LLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp EEEEECCTTTCEEEEEETTTC
T ss_pred EEEEecCCCCCEEEEEECCCC
Confidence 677765 7999999998653
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.45 E-value=3.8e-13 Score=86.09 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=71.4
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCce--eeEe-------cCcceEeccccEEE
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKN--TWYE-------MARPQVHGYDLTCL 68 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~--~~~~-------~~~~~~~~~~i~~~ 68 (117)
++|+. +....+.+|.+.|.+++|+| +++++++++.|+.+++||+..... .... ......|...|.++
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 105 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV 105 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence 45555 56677788999999999999 999999999999999999986641 1100 00112377889999
Q ss_pred EEcc-C-cEEEEecCCCeEEEeeCChh
Q psy15190 69 ALIS-T-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 69 ~~~~-~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
++.+ + ..+++++.|+.+++||+...
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~ 132 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTL 132 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTT
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCC
Confidence 9887 3 37999999999999999653
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.45 E-value=5e-13 Score=84.77 Aligned_cols=91 Identities=14% Similarity=0.209 Sum_probs=73.6
Q ss_pred Ceeeec---c--cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-Cc
Q psy15190 1 MLVWAQ---Q--PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TF 74 (117)
Q Consensus 1 v~~w~~---~--~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 74 (117)
|++|+. + ....+.+|...|.+++|+|+++.+++++.|+.+++||+..+.... ......+...+.++++.+ +.
T Consensus 32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 109 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP--TLVILRINRAARCVRWAPNEK 109 (372)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE--EEECCCCSSCEEEEEECTTSS
T ss_pred EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee--eEEeecCCCceeEEEECCCCC
Confidence 578998 3 788889999999999999999999999999999999997654111 111124667899999887 45
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|+.+++||+...
T Consensus 110 ~l~~~~~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 110 KFAVGSGSRVISICYFEQE 128 (372)
T ss_dssp EEEEEETTSSEEEEEEETT
T ss_pred EEEEEeCCCEEEEEEecCC
Confidence 7999999999999998653
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=85.20 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=70.2
Q ss_pred Ceeeec---ccCeEEc-----CCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCce---------------eeEecC
Q psy15190 1 MLVWAQ---QPCVTVG-----GHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKN---------------TWYEMA 56 (117)
Q Consensus 1 v~~w~~---~~~~~~~-----~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~---------------~~~~~~ 56 (117)
|++||+ +....+. +|...|.+++|+|+++ ++++++.|+.+++||+..... .+....
T Consensus 236 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp EEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred EEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceee
Confidence 468888 4444444 8999999999999988 899999999999999875431 112222
Q ss_pred cceEeccccEEEEEccCc-EEE-EecCCCeEEEeeCCh
Q psy15190 57 RPQVHGYDLTCLALISTF-VFA-SGADEKVVRAFRTTQ 92 (117)
Q Consensus 57 ~~~~~~~~i~~~~~~~~~-~~~-s~~~d~~i~iw~~~~ 92 (117)
....|...+.++++++++ .++ +++.|+.|++||+..
T Consensus 316 ~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 316 NVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred ccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 344567889999998854 355 899999999999864
No 88
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.44 E-value=1.7e-12 Score=81.18 Aligned_cols=89 Identities=11% Similarity=0.174 Sum_probs=72.8
Q ss_pred Ceeeec---c--cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-Cc
Q psy15190 1 MLVWAQ---Q--PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TF 74 (117)
Q Consensus 1 v~~w~~---~--~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 74 (117)
|++||+ + ....+.+|...+.+++|+|+++.+++++.|+.+++||+.... .......|...+.++++.+ +.
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGASCIDISNDGT 196 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc----eeeeeecccCceEEEEECCCCC
Confidence 468888 2 456778899999999999999999999999999999998765 2222234677889999887 44
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|+.+++||++..
T Consensus 197 ~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 197 KLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEEEEETTSEEEEEETTTT
T ss_pred EEEEEecCCcEEEEECCCC
Confidence 7999999999999999654
No 89
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.44 E-value=1.8e-12 Score=82.98 Aligned_cols=93 Identities=12% Similarity=0.180 Sum_probs=73.2
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEe------------cCcceEeccc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYE------------MARPQVHGYD 64 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~------------~~~~~~~~~~ 64 (117)
|++||+ +....+.+|...|.+++|+|++. .+++++.|+.+++||++........ ......|...
T Consensus 168 v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 478998 67788889999999999999988 5899999999999999765411110 0111346678
Q ss_pred cEEEEEccCc-EEEEecCCCeEEEeeCChh
Q psy15190 65 LTCLALISTF-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 65 i~~~~~~~~~-~~~s~~~d~~i~iw~~~~~ 93 (117)
+.++++.+++ .+++++.|+.+++||+...
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 9999998854 7999999999999999653
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.44 E-value=8.6e-13 Score=91.46 Aligned_cols=91 Identities=20% Similarity=0.352 Sum_probs=74.2
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCC--CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPS--GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS- 72 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~--~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 72 (117)
|++|+. +....+.+|.+.|.+++|+|+ ++.+++++.|+++++||+..+. +........|...+.++++++
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~ 110 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPH 110 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCG
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc--ccccccccCCCCCeEEEEECCC
Confidence 578987 456788899999999999987 9999999999999999997664 111222335778899999887
Q ss_pred --CcEEEEecCCCeEEEeeCChh
Q psy15190 73 --TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 73 --~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+..+++|+.|+.|++||+...
T Consensus 111 ~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 111 EYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp GGCSEEEEEETTSEEEEEECCSS
T ss_pred CCCCEEEEEeCCCcEEEEEeecC
Confidence 458999999999999999654
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.44 E-value=1.2e-12 Score=83.69 Aligned_cols=87 Identities=10% Similarity=0.014 Sum_probs=69.3
Q ss_pred Ceeeec--ccCeEEcC---CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-
Q psy15190 1 MLVWAQ--QPCVTVGG---HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~--~~~~~~~~---h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 74 (117)
|++||+ +....+.. |...|.+++|+|+++.+++++.|+.+++||+. +. +......|...+.++++.+++
T Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~----~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH----EIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC----EEEEEECSSSCEEEEEECSSCT
T ss_pred EEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC----EEEEeccCCCcEEEEEECCCCC
Confidence 578998 44445544 44789999999999999999999999999994 33 222233577889999998854
Q ss_pred -EEEEecCCCeEEEeeCCh
Q psy15190 75 -VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 75 -~~~s~~~d~~i~iw~~~~ 92 (117)
.+++++.|+.|++||++.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCEEEEEeCCC
Confidence 799999999999999965
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.44 E-value=4e-13 Score=84.89 Aligned_cols=92 Identities=14% Similarity=0.246 Sum_probs=71.4
Q ss_pred Ceeeec---ccCeEE---cCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCce--------eeEec-----------
Q psy15190 1 MLVWAQ---QPCVTV---GGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKN--------TWYEM----------- 55 (117)
Q Consensus 1 v~~w~~---~~~~~~---~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~--------~~~~~----------- 55 (117)
|++||+ +....+ .+|...|.+++|+|++..+++++.|+.+++||+..... .+.+.
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 578998 555666 68999999999999999999999999999999986540 00000
Q ss_pred -----CcceEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 56 -----ARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 56 -----~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
.....|...+.++++. +..+++++.|+.|++||+...
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESST
T ss_pred ccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCc
Confidence 0011266788899987 679999999999999998653
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.44 E-value=1.5e-12 Score=84.06 Aligned_cols=86 Identities=14% Similarity=0.249 Sum_probs=70.0
Q ss_pred Ceeeec---ccCeEEcC-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEE
Q psy15190 1 MLVWAQ---QPCVTVGG-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (117)
|++|+. +....+.. |...|.+++|+|++.++++++.|+.+++||+..+. .......|...+.++++ .+..+
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~-~~~~l 189 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT----KLRTMAGHQARVGCLSW-NRHVL 189 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEE-ETTEE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe----EEEEecCCCCceEEEEE-CCCEE
Confidence 578998 44444444 78899999999999999999999999999998765 22223357788889888 55689
Q ss_pred EEecCCCeEEEeeCC
Q psy15190 77 ASGADEKVVRAFRTT 91 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~ 91 (117)
++++.|+.|++||++
T Consensus 190 ~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 190 SSGSRSGAIHHHDVR 204 (401)
T ss_dssp EEEETTSEEEEEETT
T ss_pred EEEcCCCCEEEEecc
Confidence 999999999999996
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.44 E-value=1.3e-12 Score=85.22 Aligned_cols=89 Identities=17% Similarity=0.297 Sum_probs=71.8
Q ss_pred Ceeeec------ccCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ------QPCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~------~~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||+ +....+..|...|.+++|+|++. .+++++.|+++++||++.... +......|...+.++++.+.
T Consensus 256 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPH 332 (430)
T ss_dssp EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECSS
T ss_pred EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECCC
Confidence 578998 25677789999999999999887 688999999999999986431 12223357788999999884
Q ss_pred c--EEEEecCCCeEEEeeCCh
Q psy15190 74 F--VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 74 ~--~~~s~~~d~~i~iw~~~~ 92 (117)
+ ++++++.|+.|++||+..
T Consensus 333 ~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 333 NETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CTTEEEEEETTSCCEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEeCCC
Confidence 4 799999999999999965
No 95
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.43 E-value=9.8e-13 Score=83.89 Aligned_cols=84 Identities=10% Similarity=0.072 Sum_probs=58.7
Q ss_pred Ceeeec---ccCeEE-----cCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEecccc-EEEEEc
Q psy15190 1 MLVWAQ---QPCVTV-----GGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDL-TCLALI 71 (117)
Q Consensus 1 v~~w~~---~~~~~~-----~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 71 (117)
|++||. +.+..+ .+|...+.+.++ ++..+++++.|+++++||+.+++ ...+...|...+ .+++|+
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk----~l~tL~gH~~~vvs~vafS 335 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ----CTALLPPVSDQHWSFVKWS 335 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS----EEEEECCC--CCCCEEEEC
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc----EEEEecCCCCCeEEEEEEC
Confidence 467887 333333 467666554444 37889999999999999998886 222222454444 467898
Q ss_pred cC-cEEEEecCCCeEEEeeC
Q psy15190 72 ST-FVFASGADEKVVRAFRT 90 (117)
Q Consensus 72 ~~-~~~~s~~~d~~i~iw~~ 90 (117)
++ ..+++|+.|++||+||+
T Consensus 336 PDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSSEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEECCCcEEEecC
Confidence 85 47999999999999996
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.43 E-value=5.3e-13 Score=87.36 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=66.1
Q ss_pred eEEcCCCCCeeEEEECCC---CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEE
Q psy15190 10 VTVGGHFGPVRDIQWEPS---GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVR 86 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~---~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~ 86 (117)
..+.+|...|.+++|+|+ ++++++++.|+++++||+..+...... ...|...+.+++++.+..+++++.|+.|+
T Consensus 189 ~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~h~~~v~~~~~sd~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 189 EPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW---LFGHKHFVSSICCGKDYLLLSAGGDDKIF 265 (450)
T ss_dssp CCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE---CCCCSSCEEEEEECSTTEEEEEESSSEEE
T ss_pred eeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee---ecCCCCceEEEEECCCCEEEEEeCCCeEE
Confidence 367789999999999999 999999999999999999766511110 12467788999987555899999999999
Q ss_pred EeeCChh
Q psy15190 87 AFRTTQN 93 (117)
Q Consensus 87 iw~~~~~ 93 (117)
+||+..+
T Consensus 266 vwd~~~~ 272 (450)
T 2vdu_B 266 AWDWKTG 272 (450)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998653
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.43 E-value=1.2e-12 Score=82.67 Aligned_cols=85 Identities=13% Similarity=0.105 Sum_probs=68.4
Q ss_pred ccCeEEcCCCCCeeEEEECCC---CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCC
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPS---GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADE 82 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~---~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d 82 (117)
+....+.+|.+.|.+++|+|+ |.++++++.|+.+++||+....... ......|...|.++++++ +..+++++.|
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI--PKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE--EEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee--EEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 455677899999999999998 6999999999999999998632111 122345788899999987 4479999999
Q ss_pred CeEEEeeCChh
Q psy15190 83 KVVRAFRTTQN 93 (117)
Q Consensus 83 ~~i~iw~~~~~ 93 (117)
+.|++||+...
T Consensus 108 g~v~iwd~~~~ 118 (368)
T 3mmy_A 108 KTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEETTTT
T ss_pred CcEEEEEcCCC
Confidence 99999999754
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.42 E-value=1.1e-12 Score=85.46 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=71.4
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||. +....+.+|.+.|.+++| ++..+++++.|+++++||+.++. .......|...+.++++. ++.++
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~-~~~l~ 227 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE----MLNTLIHHCEAVLHLRFN-NGMMV 227 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC----EEEEECCCCSCEEEEECC-TTEEE
T ss_pred EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc----EEEEEcCCCCcEEEEEEc-CCEEE
Confidence 578998 677888999999999988 78899999999999999998776 222233577788888886 45899
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+|+.|+.|++||+..+
T Consensus 228 s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 228 TCSKDRSIAVWDMASP 243 (435)
T ss_dssp EEETTSCEEEEECSSS
T ss_pred EeeCCCcEEEEeCCCC
Confidence 9999999999999653
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.42 E-value=3e-12 Score=80.87 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=72.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVF 76 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 76 (117)
|++||+ +....+.+|...|.+++|+|+++.+++++.|+.+++||+..+..... . .+...+.++++.+ +..+
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~-~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT----W-KSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE----E-ECSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE----e-ecCCCeEEEEEccCCCEE
Confidence 578998 67788899999999999999999999999999999999987762111 1 2567788999888 4468
Q ss_pred EEecCC-----CeEEEeeCCh
Q psy15190 77 ASGADE-----KVVRAFRTTQ 92 (117)
Q Consensus 77 ~s~~~d-----~~i~iw~~~~ 92 (117)
++++.+ +.+++||+..
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEE
T ss_pred EEecCCccCCCCEEEEEEecC
Confidence 888888 9999999864
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1e-12 Score=84.57 Aligned_cols=92 Identities=10% Similarity=0.144 Sum_probs=73.6
Q ss_pred Ceeeec-c------cCeEEcCCCCCeeEEEECCC-CCEEEEEeCCCcEEEecCCCCc------eeeEecCcceEeccccE
Q psy15190 1 MLVWAQ-Q------PCVTVGGHFGPVRDIQWEPS-GQFIISVSEDQTTRLHAPFVGK------NTWYEMARPQVHGYDLT 66 (117)
Q Consensus 1 v~~w~~-~------~~~~~~~h~~~v~~i~~~~~-~~~~~s~~~d~~~~~wd~~~~~------~~~~~~~~~~~~~~~i~ 66 (117)
|++|++ . ....+.+|...|.+++|+|+ +.++++++.|+.+++||+.... .... ......|...+.
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~v~ 169 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT-PGQSMSSVDEVI 169 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC-CCCSCCSSCCCC
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc-cccccCCCCCee
Confidence 468888 3 56777889999999999997 8999999999999999997654 1111 112235677899
Q ss_pred EEEEccC--cEEEEecCCCeEEEeeCChh
Q psy15190 67 CLALIST--FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 67 ~~~~~~~--~~~~s~~~d~~i~iw~~~~~ 93 (117)
++++.++ ..+++++.|+.|++||++..
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 198 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAK 198 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTT
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCC
Confidence 9998875 58999999999999999754
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.1e-12 Score=85.20 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=68.2
Q ss_pred eec--ccCeEE-cCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCC---CceeeEecCcceEeccccEEEEEcc-CcE
Q psy15190 4 WAQ--QPCVTV-GGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFV---GKNTWYEMARPQVHGYDLTCLALIS-TFV 75 (117)
Q Consensus 4 w~~--~~~~~~-~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~---~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 75 (117)
|+. +....+ .+|.+.|.+++|+| ++.++++++.|+++++||+.. +. ... ......|...|.++++.+ +..
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~-~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYS-SSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCS-CSEEEECSSCEEEEEECTTSSE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-ccc-eeeeccCCCCEEEEEEeCCCCE
Confidence 555 556677 88999999999999 999999999999999999865 21 000 111124778899999988 557
Q ss_pred EEEecCCCeEEEeeCC
Q psy15190 76 FASGADEKVVRAFRTT 91 (117)
Q Consensus 76 ~~s~~~d~~i~iw~~~ 91 (117)
+++++.|+.|++||+.
T Consensus 126 l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVN 141 (437)
T ss_dssp EEEEETTSEEEEEEEE
T ss_pred EEEEeCCCEEEEEEec
Confidence 9999999999999984
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.41 E-value=3.4e-12 Score=85.62 Aligned_cols=93 Identities=18% Similarity=0.298 Sum_probs=74.2
Q ss_pred Ceeeec---ccCeEEcCCCC---CeeEEEECCC-CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ---QPCVTVGGHFG---PVRDIQWEPS-GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~---~v~~i~~~~~-~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||. +....+.+|.. .|.+++|+|+ ++.+++++.|+.+++||+..+............|...+.++++..+
T Consensus 185 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 264 (615)
T 1pgu_A 185 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDS 264 (615)
T ss_dssp EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSS
T ss_pred EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCC
Confidence 578998 67788889999 9999999999 9999999999999999998776221110000146778899998755
Q ss_pred cEEEEecCCCeEEEeeCChh
Q psy15190 74 FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 ~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+++++.|+.+++||+...
T Consensus 265 ~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 265 QKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp SEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEcCCCcEEEEECCCC
Confidence 67999999999999999753
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.41 E-value=4.3e-12 Score=82.76 Aligned_cols=91 Identities=20% Similarity=0.329 Sum_probs=71.3
Q ss_pred Ceeeec-c---------cCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEE
Q psy15190 1 MLVWAQ-Q---------PCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLA 69 (117)
Q Consensus 1 v~~w~~-~---------~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~ 69 (117)
|++|++ . ....+.+|...|.+++|+| ++..+++++.|+.+++||++... ...+......|...+.+++
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-TSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-SSSCSEEEECCSSCEEEEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-CCcceeEeecCCCCeEEEE
Confidence 468888 2 1566778999999999999 78899999999999999998652 0001112235778899999
Q ss_pred EccCc--EEEEecCCCeEEEeeCCh
Q psy15190 70 LISTF--VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 70 ~~~~~--~~~s~~~d~~i~iw~~~~ 92 (117)
+.+.+ .+++|+.|+.|++||++.
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 98843 799999999999999975
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.40 E-value=1.4e-12 Score=82.69 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=67.0
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEE
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVR 86 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~ 86 (117)
+....+.+|...|.+++|+|++..+++++.|+.+++||+..+. +......+...+.++++.+++.+++++.|+.++
T Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~ 268 (372)
T 1k8k_C 193 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM----AVATLASETLPLLAVTFITESSLVAAGHDCFPV 268 (372)
T ss_dssp CEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT----EEEEEECSSCCEEEEEEEETTEEEEEETTSSCE
T ss_pred hheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc----eeEEEccCCCCeEEEEEecCCCEEEEEeCCeEE
Confidence 4566777899999999999999999999999999999998776 222233466788999998877655556999999
Q ss_pred EeeCCh
Q psy15190 87 AFRTTQ 92 (117)
Q Consensus 87 iw~~~~ 92 (117)
+|++..
T Consensus 269 i~~~~~ 274 (372)
T 1k8k_C 269 LFTYDS 274 (372)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 999865
No 105
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.40 E-value=1.2e-12 Score=90.48 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=69.6
Q ss_pred cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEE
Q psy15190 8 PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVR 86 (117)
Q Consensus 8 ~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~ 86 (117)
..+.+.+|.+.|.+++|+|+++++++++.|+.+++||+.++. .......|...+.++++++ +..+++++.|+.|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc----eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 457788999999999999999999999999999999998775 2223345778899999988 44799999999999
Q ss_pred EeeCChh
Q psy15190 87 AFRTTQN 93 (117)
Q Consensus 87 iw~~~~~ 93 (117)
+||+..+
T Consensus 81 vw~~~~~ 87 (814)
T 3mkq_A 81 VFNYNTG 87 (814)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998654
No 106
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.39 E-value=6.7e-12 Score=78.46 Aligned_cols=85 Identities=11% Similarity=0.135 Sum_probs=70.0
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFA 77 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 77 (117)
|++|+. .....+..|...|.+++|+|+++++++++.|+.+++||+..+.... ...+...+.++++.++ ..++
T Consensus 248 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF-----QSKESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp EEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-----EEECSSCEEEEEECTTSCEEE
T ss_pred EEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE-----EecCCCcEEEEEECCCCCEEE
Confidence 468888 3445677899999999999999999999999999999998776221 1246678889998874 4799
Q ss_pred EecCCCeEEEeeC
Q psy15190 78 SGADEKVVRAFRT 90 (117)
Q Consensus 78 s~~~d~~i~iw~~ 90 (117)
+++.|+.+++|++
T Consensus 323 ~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 323 TGSGDKKATVYEV 335 (337)
T ss_dssp EEETTSCEEEEEE
T ss_pred EecCCCeEEEEEE
Confidence 9999999999996
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.39 E-value=2.2e-12 Score=84.18 Aligned_cols=86 Identities=24% Similarity=0.336 Sum_probs=69.5
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||. +....+.+|.+.|.++.|+ +..+++++.|+++++||+.++. .......|...+.++.+. +..++
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~-~~~l~ 213 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLH-EKRVV 213 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEE-TTEEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc----EEEEECCCCCcEEEEEec-CCEEE
Confidence 578998 6778888999999999997 6799999999999999998775 222233567778888874 45788
Q ss_pred EecCCCeEEEeeCChh
Q psy15190 78 SGADEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~~d~~i~iw~~~~~ 93 (117)
+|+.|+.+++||+..+
T Consensus 214 s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 214 SGSRDATLRVWDIETG 229 (445)
T ss_dssp EEETTSEEEEEESSSC
T ss_pred EEeCCCEEEEEECCCC
Confidence 9999999999998653
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.39 E-value=2.5e-12 Score=80.80 Aligned_cols=87 Identities=3% Similarity=-0.118 Sum_probs=71.8
Q ss_pred Ceeeec---c---cCeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecC-CCCceeeEecCcceE--eccccEEEEE
Q psy15190 1 MLVWAQ---Q---PCVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAP-FVGKNTWYEMARPQV--HGYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~---~---~~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~-~~~~~~~~~~~~~~~--~~~~i~~~~~ 70 (117)
|++|++ + ....+.+|...|.+++|+|+++ .+++++.|+.+++||+ ..... ..... |...+.++++
T Consensus 35 v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-----~~~~~~~~~~~v~~l~~ 109 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-----QALTNNEANLGICRICK 109 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-----EECBSCCCCSCEEEEEE
T ss_pred EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-----EeccccCCCCceEEEEe
Confidence 578988 2 2556668999999999999999 9999999999999999 76652 12234 7788999998
Q ss_pred ccCcEEEEecCCCeEEEeeCCh
Q psy15190 71 ISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 71 ~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
.++..+++++.|+.|++||++.
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 110 YGDDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp ETTTEEEEEETTSEEEEECHHH
T ss_pred CCCCEEEEEcCCCeEEEEcccc
Confidence 8777899999999999999854
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=4.4e-12 Score=80.35 Aligned_cols=77 Identities=5% Similarity=0.003 Sum_probs=60.6
Q ss_pred CCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEEEeeC
Q psy15190 14 GHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVRAFRT 90 (117)
Q Consensus 14 ~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~ 90 (117)
+|.+.|.+++|+| ++.++++++.|+++++||+..+...... ...+...+.++++.+++ .+++|+.|+.|++||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH---SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE---CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE---ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 6778899999999 9999999999999999999877621110 01234468899998854 6888999999999999
Q ss_pred Chh
Q psy15190 91 TQN 93 (117)
Q Consensus 91 ~~~ 93 (117)
+.+
T Consensus 200 ~~~ 202 (343)
T 3lrv_A 200 SSP 202 (343)
T ss_dssp SCT
T ss_pred CCC
Confidence 764
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.38 E-value=2e-12 Score=83.59 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=66.8
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCC-CEEEEEeCCCcEEEecCCCCceeeEe--------------c-------
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYE--------------M------- 55 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~--------------~------- 55 (117)
|++||+ .+...+.+|...+.+++|+|++ ..+++++.|+++++||+..+...... .
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 589998 5566777899999999999976 47999999999999999866411000 0
Q ss_pred CcceEeccccEEEEEcc--CcEEEEecCCCeEEEeeCChh
Q psy15190 56 ARPQVHGYDLTCLALIS--TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 56 ~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~i~iw~~~~~ 93 (117)
.....+...+.++.+.+ +..+++++.|+++++||+...
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 00123445677788653 557999999999999998643
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.38 E-value=2.4e-12 Score=83.89 Aligned_cols=85 Identities=21% Similarity=0.320 Sum_probs=70.6
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||+ +....+.+|...|.++.| ++..+++++.|+++++||+.++. +......|...+.++++ .+..++
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~-~~~~l~ 350 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF-DNKRIV 350 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEC-CSSEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC----EEEEEeCCcCcEEEEEe-cCCEEE
Confidence 578998 677888899999999988 47899999999999999998776 22223357778888888 667899
Q ss_pred EecCCCeEEEeeCCh
Q psy15190 78 SGADEKVVRAFRTTQ 92 (117)
Q Consensus 78 s~~~d~~i~iw~~~~ 92 (117)
+|+.|+.|++||+..
T Consensus 351 sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 351 SGAYDGKIKVWDLVA 365 (435)
T ss_dssp EEETTSCEEEEEHHH
T ss_pred EEeCCCcEEEEECCC
Confidence 999999999999854
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.37 E-value=4.6e-12 Score=91.20 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=74.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECC--CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-Cc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEP--SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TF 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~--~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 74 (117)
|++||. +....+.+|...|.+++|+| ++..+++++.|+++++||+..+. .......|...+.++++++ +.
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~----~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE----CRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS----EEEEECCCSSCEEEEEECSSTT
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc----hhheecCCCCCEEEEEEecCCC
Confidence 579999 67888899999999999999 56689999999999999998776 2222335778899999988 45
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
.+++++.|+.|++||+...
T Consensus 757 ~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 757 LLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp EEEEEESSSEEEEEEGGGT
T ss_pred EEEEEECCCeEEEEeCCCC
Confidence 7999999999999998543
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.37 E-value=3.9e-12 Score=82.57 Aligned_cols=91 Identities=8% Similarity=0.026 Sum_probs=66.1
Q ss_pred Ceeeec----ccCe-------EEcCCCCCeeEEEECCCC-CEEEEEeCCCcEEEecCCCCceeeEecCcceEec------
Q psy15190 1 MLVWAQ----QPCV-------TVGGHFGPVRDIQWEPSG-QFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHG------ 62 (117)
Q Consensus 1 v~~w~~----~~~~-------~~~~h~~~v~~i~~~~~~-~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~------ 62 (117)
|++||+ +... .+.+|...|.+++|+|++ ..+++++.|+++++||++..............+.
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (447)
T 3dw8_B 200 INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS 279 (447)
T ss_dssp EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CC
T ss_pred EEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccc
Confidence 578988 2222 356899999999999998 9999999999999999987651000001111222
Q ss_pred ------cccEEEEEccCc-EEEEecCCCeEEEeeCCh
Q psy15190 63 ------YDLTCLALISTF-VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 63 ------~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~~ 92 (117)
..+.++++++++ .+++++. +.|++||++.
T Consensus 280 ~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 280 FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 378999998854 6778877 9999999964
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.35 E-value=1.8e-12 Score=83.10 Aligned_cols=84 Identities=7% Similarity=-0.023 Sum_probs=64.1
Q ss_pred eEEcCCCCCeeEEEECCCCCEEEEEeCCC----cEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCe
Q psy15190 10 VTVGGHFGPVRDIQWEPSGQFIISVSEDQ----TTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKV 84 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~~~~~~s~~~d~----~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~ 84 (117)
....+|...|.+++|+|+++.+++++.|+ .+++|+................|...|.++++++++ .+++|+.|++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 34456888899999999999999999887 577888765542222222233466789999999854 6999999999
Q ss_pred EEEeeCChh
Q psy15190 85 VRAFRTTQN 93 (117)
Q Consensus 85 i~iw~~~~~ 93 (117)
|++||....
T Consensus 293 V~iwd~~~~ 301 (365)
T 4h5i_A 293 IALVKLKDL 301 (365)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999999653
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.35 E-value=4e-12 Score=81.11 Aligned_cols=89 Identities=3% Similarity=-0.186 Sum_probs=60.5
Q ss_pred Ceeeec----ccCeEEcCCCCCeeEEEECC---CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEe---ccccEEEEE
Q psy15190 1 MLVWAQ----QPCVTVGGHFGPVRDIQWEP---SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVH---GYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~----~~~~~~~~h~~~v~~i~~~~---~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~---~~~i~~~~~ 70 (117)
|++|++ +....+.+|...+..++|++ ++..++|++.|+++|+||+.+++.... ...+ ...+.++++
T Consensus 159 V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t----L~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 159 VEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK----MHIDDSYQASVCHKAY 234 (356)
T ss_dssp EEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE----EECCC---CCCEEEEE
T ss_pred EEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE----EcCCCcceeeeEEEEE
Confidence 467777 44556667888888888888 678999999999999999988862111 1111 224555666
Q ss_pred ccCcE-------------EEEecCCCeEEEeeCChh
Q psy15190 71 ISTFV-------------FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 71 ~~~~~-------------~~s~~~d~~i~iw~~~~~ 93 (117)
++++. +++|+.|+++++||...+
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 66553 367889999999998654
No 116
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.35 E-value=5.5e-12 Score=79.49 Aligned_cols=88 Identities=6% Similarity=0.002 Sum_probs=69.9
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECC---CCCEEEEEeCCCcEEEecCCCCceeeEecCcc-----eEeccccEEEEE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEP---SGQFIISVSEDQTTRLHAPFVGKNTWYEMARP-----QVHGYDLTCLAL 70 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~---~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~-----~~~~~~i~~~~~ 70 (117)
|++||+ ........|...|.+++|+| ++..+++++.|+.+++||+.... +.... ..|...+.++++
T Consensus 192 i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 192 IKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH----PTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE----TTTEEEEEEEECCSSCEEEEEE
T ss_pred EEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC----cccceeeeccCCCcCCEEEEEE
Confidence 478998 22344467889999999999 89999999999999999997543 22211 257788999999
Q ss_pred ccCc--EEEEecCCCeEEEeeCCh
Q psy15190 71 ISTF--VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 71 ~~~~--~~~s~~~d~~i~iw~~~~ 92 (117)
.+++ .+++++.|+.|++||+..
T Consensus 268 ~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 268 LPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp ETTEEEEEEEEETTSEEEEEEEEC
T ss_pred CCCCCcEEEEEeCCCcEEEeecCC
Confidence 8854 599999999999999853
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=5.6e-12 Score=87.46 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=74.2
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECC-------------CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEec
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEP-------------SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHG 62 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~-------------~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~ 62 (117)
|++||+ .....+.+|...|.+++|+| ++..+++++.|+++++||+......+........|.
T Consensus 125 I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~ 204 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (753)
T ss_dssp EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC
Confidence 578998 24566778999999999999 589999999999999999976642333333344578
Q ss_pred cccEEEEEccC----cEEEEecCCCeEEEeeCCh
Q psy15190 63 YDLTCLALIST----FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 63 ~~i~~~~~~~~----~~~~s~~~d~~i~iw~~~~ 92 (117)
..+.+++++++ ..+++++.|+.|++||+..
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 88999999886 4699999999999999865
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.9e-11 Score=80.07 Aligned_cols=93 Identities=11% Similarity=-0.045 Sum_probs=72.3
Q ss_pred Ceeeec-----ccCeEEc--CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ-----QPCVTVG--GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~-----~~~~~~~--~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++|++ +....+. .|...|.+++|+|+++.+++++.|+.+++|++........+......|...+.+++++++
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD 206 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCC
Confidence 468887 2445554 567889999999999999999999999999987664111011244568888999998886
Q ss_pred ---c-EEEEecCCCeEEEeeCChh
Q psy15190 74 ---F-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 74 ---~-~~~s~~~d~~i~iw~~~~~ 93 (117)
+ .+++++.|+.|++||+...
T Consensus 207 ~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 207 SDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp TTSCEEEEEEETTSCEEEEEESCT
T ss_pred CCCCcEEEEEcCCCcEEEEECCCC
Confidence 5 6999999999999998653
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.32 E-value=7e-12 Score=81.79 Aligned_cols=85 Identities=21% Similarity=0.297 Sum_probs=51.6
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEE
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFAS 78 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s 78 (117)
++||+ +....+.+|...|.+++| ++..+++++.|+.+++||...+. +......|...+.++.+ .+..+++
T Consensus 222 ~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~-~~~~l~~ 294 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET----CLHTLQGHTNRVYSLQF-DGIHVVS 294 (445)
T ss_dssp EEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE----EEEEECCCSSCEEEEEE-CSSEEEE
T ss_pred EEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc----EeEEecCCCCceEEEEE-CCCEEEE
Confidence 45665 444555566666666665 45566666666666666665443 11112235566677766 5557888
Q ss_pred ecCCCeEEEeeCChh
Q psy15190 79 GADEKVVRAFRTTQN 93 (117)
Q Consensus 79 ~~~d~~i~iw~~~~~ 93 (117)
++.|+.|++||+..+
T Consensus 295 ~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 295 GSLDTSIRVWDVETG 309 (445)
T ss_dssp EETTSCEEEEETTTC
T ss_pred EeCCCeEEEEECCCC
Confidence 888888888887543
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.32 E-value=2.5e-11 Score=77.48 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=67.2
Q ss_pred Ceeeec---ccCeEEc-C-CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCc-eeeEecCc-----------------
Q psy15190 1 MLVWAQ---QPCVTVG-G-HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK-NTWYEMAR----------------- 57 (117)
Q Consensus 1 v~~w~~---~~~~~~~-~-h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~-~~~~~~~~----------------- 57 (117)
|++||+ ++...+. + |...|.+++|+|+++++++++.|+++++||+.... ........
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 589999 6677777 5 99999999999999999999999999999997543 01111000
Q ss_pred -ceEeccccEEEEEccCc-EEEEecCCCeEEEeeCCh
Q psy15190 58 -PQVHGYDLTCLALISTF-VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 58 -~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~~ 92 (117)
..........+++.+++ .+++++.||.+++|++..
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 00001123567777755 699999999999999854
No 121
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.32 E-value=1.8e-11 Score=79.43 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=64.7
Q ss_pred Ceeeec---cc----CeEEcCCCC------------CeeEEEECCCCCEEEEEeCCCcEEEecCCC-CceeeEecCcceE
Q psy15190 1 MLVWAQ---QP----CVTVGGHFG------------PVRDIQWEPSGQFIISVSEDQTTRLHAPFV-GKNTWYEMARPQV 60 (117)
Q Consensus 1 v~~w~~---~~----~~~~~~h~~------------~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~-~~~~~~~~~~~~~ 60 (117)
|++||+ +. ...+.+|.. .|.+++|+|+++++++++. +.+++||+.. .. +......
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~----~~~~~~~ 325 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR----PVETYQV 325 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS----CSCCEES
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc----ccceeec
Confidence 578998 33 678888876 8999999999999999999 9999999976 43 2222222
Q ss_pred ecc---------------ccEEEEEccC-cEEEEecCCCeEEEeeCChh
Q psy15190 61 HGY---------------DLTCLALIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 61 ~~~---------------~i~~~~~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
|.. .+..++++++ ..+++|+.|+.|++||+..+
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 321 1223777774 46999999999999999653
No 122
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.32 E-value=1.1e-11 Score=77.77 Aligned_cols=89 Identities=9% Similarity=0.079 Sum_probs=67.6
Q ss_pred Ceeeec-c-----cCeEEcCCCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCC------ceeeEecCcceEe------
Q psy15190 1 MLVWAQ-Q-----PCVTVGGHFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVG------KNTWYEMARPQVH------ 61 (117)
Q Consensus 1 v~~w~~-~-----~~~~~~~h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~------~~~~~~~~~~~~~------ 61 (117)
|++||+ . .......|...+.+++|+| +++.+++++.|+.+++|++... .. ......+
T Consensus 172 i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 247 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK----RFAFRCHRLNLKD 247 (342)
T ss_dssp EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT----CEEEECCCCCTTC
T ss_pred EEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccc----ceeeecccccccc
Confidence 467887 3 2234456888999999999 9999999999999999998765 21 1111122
Q ss_pred ---ccccEEEEEccC-cEEEEecCCCeEEEeeCChh
Q psy15190 62 ---GYDLTCLALIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 62 ---~~~i~~~~~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
...+.++++.++ ..+++++.|+.|++||+...
T Consensus 248 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 337899998884 46999999999999999754
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.3e-11 Score=83.26 Aligned_cols=77 Identities=9% Similarity=0.127 Sum_probs=58.4
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecC-cceEeccccEEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMA-RPQVHGYDLTCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
.|.+.|.+++|+|+|..+++++.|+++++||... . ..... ........+.++++++++ .+++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~--l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-M--LTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-E--EEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-e--eeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5677899999999999999999999999999642 1 11000 000012358899999955 59999999999999997
Q ss_pred hh
Q psy15190 92 QN 93 (117)
Q Consensus 92 ~~ 93 (117)
.+
T Consensus 160 ~~ 161 (588)
T 2j04_A 160 KN 161 (588)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.10 E-value=3e-10 Score=73.57 Aligned_cols=89 Identities=11% Similarity=0.005 Sum_probs=67.4
Q ss_pred Ceeeec---ccCe-----EEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc
Q psy15190 1 MLVWAQ---QPCV-----TVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS 72 (117)
Q Consensus 1 v~~w~~---~~~~-----~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (117)
|++||. +... .+.+|...|.+++|+++++.+++++.|+.+++||...+.... ....+...+.++++.+
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~----~~~~~~~~~~~~~~~~ 221 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA----TVDLTGKWSKILLYDP 221 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE----EEECSSSSEEEEEEET
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE----EEcCCCCCeeEEEEcC
Confidence 467888 2333 345788899999999999999999999999999998765222 2224566788888887
Q ss_pred Cc-E-EEEecCCCeEEEeeCChh
Q psy15190 73 TF-V-FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 73 ~~-~-~~s~~~d~~i~iw~~~~~ 93 (117)
++ . +++++.|+.|++||+...
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEecCCCcEEEEECCCC
Confidence 44 4 467778999999998653
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.08 E-value=9.7e-11 Score=76.86 Aligned_cols=79 Identities=6% Similarity=-0.059 Sum_probs=60.2
Q ss_pred CCCCeeEEEECCCCCEEE----EEeCCCcEEEecCCCC-----ce--eeEecCcceEeccccEEEEEcc--CcEEEEecC
Q psy15190 15 HFGPVRDIQWEPSGQFII----SVSEDQTTRLHAPFVG-----KN--TWYEMARPQVHGYDLTCLALIS--TFVFASGAD 81 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~----s~~~d~~~~~wd~~~~-----~~--~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~ 81 (117)
+...|.+++|+|++++++ +++.|+++++||+... .. ..........|...|.++++.+ +..+++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 556799999999999999 8899999999998643 10 0000111224678899999987 457999999
Q ss_pred CCeEEEeeCChh
Q psy15190 82 EKVVRAFRTTQN 93 (117)
Q Consensus 82 d~~i~iw~~~~~ 93 (117)
|+++++||++..
T Consensus 171 Dg~v~iwD~~~~ 182 (434)
T 2oit_A 171 DGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEESSS
T ss_pred CCeEEEEEcCCC
Confidence 999999999754
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.08 E-value=1.2e-09 Score=71.15 Aligned_cols=88 Identities=11% Similarity=0.041 Sum_probs=67.0
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCC---cEEEecCCCCceeeEecCcceEeccccEEEEEccCc-
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQ---TTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~---~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 74 (117)
|++||. .....+.+|...+.+++|+|+|+.+++++.|+ .+++||+..+... ....+...+.++++++++
T Consensus 161 i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-----~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 161 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-----QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----EEECCSSCEEEEEECTTSS
T ss_pred EEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-----EeecCCCcccCEEEcCCCC
Confidence 468888 56778888999999999999999999999885 8999999876521 122345567888998855
Q ss_pred EEE-EecCCC--eEEEeeCChh
Q psy15190 75 VFA-SGADEK--VVRAFRTTQN 93 (117)
Q Consensus 75 ~~~-s~~~d~--~i~iw~~~~~ 93 (117)
.++ +++.|+ .|.+||+..+
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTC
T ss_pred EEEEEEecCCCceEEEEECCCC
Confidence 344 666655 4899998653
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.05 E-value=2.5e-09 Score=68.41 Aligned_cols=87 Identities=11% Similarity=0.061 Sum_probs=64.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEE-EEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFI-ISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~-~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 74 (117)
|++||. +....+.+|. .+.+++|+|+++.+ ++++.|+++++||..++..... ......+.++++++++
T Consensus 14 v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~-----~~~~~~v~~~~~spdg~~ 87 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT-----VPAGSSPQGVAVSPDGKQ 87 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE-----EECSSSEEEEEECTTSSE
T ss_pred EEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE-----EECCCCccceEECCCCCE
Confidence 578998 5666666664 48999999999876 6778999999999987762221 1233478888888744
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
+++++..++.|++||+..+
T Consensus 88 l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp EEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCCEEEEEECCCC
Confidence 3566777899999999754
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.88 E-value=6.9e-08 Score=61.71 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=63.3
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEE-EEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFII-SVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~-s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 74 (117)
|++||. +....+..+. .+.+++|+|+++.++ +++.|+.+++||+..+..... ......+.++++.+++
T Consensus 56 i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~-----~~~~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT-----VKTGKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE-----EECSSSEEEEEECTTSSE
T ss_pred EEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE-----EeCCCCcceEEECCCCCE
Confidence 478888 5555555444 899999999999774 556779999999987752111 1234467788888754
Q ss_pred EEEEecCCCeEEEeeCChh
Q psy15190 75 VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~~~ 93 (117)
++++++.|+.|++||+..+
T Consensus 130 l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp EEEEETTTTEEEEEETTTT
T ss_pred EEEEeCCCCEEEEEECCCC
Confidence 3478888999999998653
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.85 E-value=2.9e-08 Score=64.27 Aligned_cols=88 Identities=8% Similarity=-0.116 Sum_probs=65.2
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEE-EEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-E
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFII-SVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-V 75 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~-s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 75 (117)
|++||. +....+..|...+.+++|+|+++.++ +++.|+.+++||+..+..... . .....+.++++.+++ .
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~----~-~~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK----T-DKIGLPRGLLLSKDGKE 267 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE----C-CCCSEEEEEEECTTSSE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE----e-cCCCCceEEEEcCCCCE
Confidence 478988 56677778999999999999998874 555899999999987652111 1 123447788888754 6
Q ss_pred EEEec--------CCCeEEEeeCChh
Q psy15190 76 FASGA--------DEKVVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~--------~d~~i~iw~~~~~ 93 (117)
+++++ .|+.|++||+..+
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEEECCCCccccCCCeEEEEECCCC
Confidence 66666 5889999998653
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.73 E-value=1.6e-07 Score=63.35 Aligned_cols=86 Identities=9% Similarity=0.074 Sum_probs=63.1
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecC--CCCceeeEecCcceEeccccEEEEEcc---
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAP--FVGKNTWYEMARPQVHGYDLTCLALIS--- 72 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~--~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 72 (117)
|.+||. ++..++..+.. ++.+.|+|+|+++++++.|+++++||+ .++.. ..+. ..+.....+++++
T Consensus 161 V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~----~~~i-~~g~~p~~va~sp~~~ 234 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK----VAEI-KIGIEARSVESSKFKG 234 (543)
T ss_dssp EEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE----EEEE-ECCSEEEEEEECCSTT
T ss_pred EEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE----EEEE-ecCCCcceEEeCCCcC
Confidence 468888 56677763333 889999999999999999999999999 55541 1111 1345567888886
Q ss_pred -C-cEEEEec-CCCeEEEeeCCh
Q psy15190 73 -T-FVFASGA-DEKVVRAFRTTQ 92 (117)
Q Consensus 73 -~-~~~~s~~-~d~~i~iw~~~~ 92 (117)
+ ..+++++ .++++.+||...
T Consensus 235 ~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 235 YEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp CTTTEEEEEEEESSEEEEEETTT
T ss_pred CCCCEEEEEEccCCeEEEEeccc
Confidence 4 4566666 489999999754
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.66 E-value=4.6e-07 Score=59.05 Aligned_cols=87 Identities=10% Similarity=0.014 Sum_probs=60.5
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEE-EEeCCCc--EEEecCCCCceeeEecCcceEeccccEEEEEccCc-
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFII-SVSEDQT--TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~-s~~~d~~--~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 74 (117)
|++||+ .....+..|...+.+++|+|+|+.++ +++.|+. +.+||+..+.. .+...+...+.++++++++
T Consensus 205 i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 205 LVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-----RQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp EEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EECCCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-----EeCcCCCCcccceEECCCCC
Confidence 468888 33345677888999999999999877 7776665 88889876641 1122345667888888855
Q ss_pred EEEEecC-CC--eEEEeeCCh
Q psy15190 75 VFASGAD-EK--VVRAFRTTQ 92 (117)
Q Consensus 75 ~~~s~~~-d~--~i~iw~~~~ 92 (117)
.+++++. ++ .|.+||...
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTS
T ss_pred EEEEEECCCCCcEEEEEECCC
Confidence 4666554 45 667778754
No 132
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.64 E-value=8.4e-08 Score=64.67 Aligned_cols=85 Identities=8% Similarity=0.036 Sum_probs=62.9
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCC--cEEEecCCCCceeeEecCcceEeccccEEEE-------
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQ--TTRLHAPFVGKNTWYEMARPQVHGYDLTCLA------- 69 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~--~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~------- 69 (117)
|++||+ .....+.+|...+..++|+|+|+.++++..++ .+.+||+..+... ....+...+..+.
T Consensus 177 i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-----DLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp EEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-----ECCCSCSHHHHHCCSEEEEE
T ss_pred EEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-----EccCCCcChhhhhhccccce
Confidence 457886 44567788888899999999999999888888 8999999766522 1112333333333
Q ss_pred -EccC-cEEEEecCCCeEEEeeC
Q psy15190 70 -LIST-FVFASGADEKVVRAFRT 90 (117)
Q Consensus 70 -~~~~-~~~~s~~~d~~i~iw~~ 90 (117)
++++ .++++++.|+.+++|++
T Consensus 252 ~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 252 GYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EECTTSCEEEEEEETTEEEEEET
T ss_pred eEcCCCcEEEEEEcCCcEEEEEE
Confidence 7775 46888889999999998
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.52 E-value=2.6e-07 Score=56.40 Aligned_cols=86 Identities=7% Similarity=-0.025 Sum_probs=57.6
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCC-CceeeEecCcceEeccccEEEEEccCc-EE
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFV-GKNTWYEMARPQVHGYDLTCLALISTF-VF 76 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 76 (117)
|++||. .....+..|...+.+++|+|+++++++++ ++.+.+||+.. +..... .. ......+.++++++++ .+
T Consensus 24 i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~-~~--~~~~~~~~~~~~spdg~~l 99 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV-DT--GFATICNNDHGISPDGALY 99 (297)
T ss_dssp EEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC-CC--TTCCCBCSCCEECTTSSEE
T ss_pred EEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe-cc--ccccccccceEECCCCCEE
Confidence 467888 33445567888999999999999999877 77999999977 541111 00 0112456778887744 56
Q ss_pred EEec--CCCeEEEeeC
Q psy15190 77 ASGA--DEKVVRAFRT 90 (117)
Q Consensus 77 ~s~~--~d~~i~iw~~ 90 (117)
++++ .++..++|.+
T Consensus 100 ~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 100 AISDKVEFGKSAIYLL 115 (297)
T ss_dssp EEEECTTTSSCEEEEE
T ss_pred EEEEeCCCCcceEEEE
Confidence 6666 3455666654
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.51 E-value=8.1e-07 Score=54.16 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=58.4
Q ss_pred eeeec----ccCeEEcCCCCCeeEEEECCCCCEEEEEe-CCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-E
Q psy15190 2 LVWAQ----QPCVTVGGHFGPVRDIQWEPSGQFIISVS-EDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-V 75 (117)
Q Consensus 2 ~~w~~----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~-~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 75 (117)
++|++ .....+..+...+.++.|+|+++.++.++ .++.+++|++........ ....+...+..+.+++++ .
T Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE---RITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp EEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE---ECCCCSEEEEEEEECTTSSE
T ss_pred EEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE---EEecCCcccCCeEECCCCCE
Confidence 46665 33455566778899999999999877665 588999998852221111 112234566777887744 4
Q ss_pred EEEecCC-----------CeEEEeeCChh
Q psy15190 76 FASGADE-----------KVVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~~d-----------~~i~iw~~~~~ 93 (117)
+++++.+ ..|.+||+..+
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 5555544 56999998653
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.47 E-value=8.6e-07 Score=63.69 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=62.6
Q ss_pred eeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEe
Q psy15190 3 VWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASG 79 (117)
Q Consensus 3 ~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~ 79 (117)
+|+. .....+.+|...+..++|+|+|+.+++++.++.+++||+.++..... ...+...+..+++++++ .++++
T Consensus 363 ~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~----~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 363 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI----ERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp EEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE----EECSSSCCCCEEECTTSCEEEEE
T ss_pred EEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe----ccCCCCCccceEECCCCCeEEEE
Confidence 4455 22334447778899999999999999999999999999987652111 11355667888888865 46665
Q ss_pred cCC----------CeEEEeeCChh
Q psy15190 80 ADE----------KVVRAFRTTQN 93 (117)
Q Consensus 80 ~~d----------~~i~iw~~~~~ 93 (117)
+.+ +.+++||+..+
T Consensus 439 ~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 439 FPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEECSSTTCSCCEEEEEEEETTTT
T ss_pred ecCccccccCCCCCeEEEEECCCC
Confidence 543 49999998653
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.42 E-value=6.7e-07 Score=61.71 Aligned_cols=68 Identities=12% Similarity=-0.049 Sum_probs=51.2
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEecCCCC---ceeeEecCcceEeccccEEEEEccCcE-EEEecCCCeEEEeeCChh
Q psy15190 19 VRDIQWEPSGQFIISVSEDQTTRLHAPFVG---KNTWYEMARPQVHGYDLTCLALISTFV-FASGADEKVVRAFRTTQN 93 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~i~iw~~~~~ 93 (117)
+..++|+|+|+.++.++. +.+.+||+..+ . ..+...+...+..+++++++. +++++ ++.|.+||+..+
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~-----~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA-----VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS-----CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcce-----EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 788999999999999886 89999999765 3 112223456678889998664 66655 569999998653
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.38 E-value=2.7e-06 Score=53.11 Aligned_cols=74 Identities=12% Similarity=-0.030 Sum_probs=51.4
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCC-CcEEEecCC--CCceeeEecCcceEeccccEEEEEccCc-EE-EEecCCCeEEEe
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSED-QTTRLHAPF--VGKNTWYEMARPQVHGYDLTCLALISTF-VF-ASGADEKVVRAF 88 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d-~~~~~wd~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-~s~~~d~~i~iw 88 (117)
.+...+..++|+|+++.+++++.+ +.+++|++. .+. ........ ....+..+++++++ .+ +++..++.+.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA--LTFAAESA-LPGSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC--EEEEEEEE-CSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc--eeeccccc-cCCCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 466778899999999988888876 899999987 333 11111111 12356778887754 34 455568999999
Q ss_pred eC
Q psy15190 89 RT 90 (117)
Q Consensus 89 ~~ 90 (117)
|+
T Consensus 112 d~ 113 (343)
T 1ri6_A 112 RL 113 (343)
T ss_dssp EE
T ss_pred EC
Confidence 98
No 138
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.38 E-value=4.6e-06 Score=52.90 Aligned_cols=100 Identities=12% Similarity=0.147 Sum_probs=58.2
Q ss_pred CCCCeeEEEECCCCCEEEEEeC--CCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEec-CCCeEEEeeC
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSE--DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGA-DEKVVRAFRT 90 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~--d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~i~iw~~ 90 (117)
+......++|+|+|++++.+.. ++.+.+|++............... +.....+++++++ .+++++ .++.+.+|++
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 3345679999999998866555 488999998622111111111111 3456778888855 355554 6899999766
Q ss_pred ChhHHHhhhhhcCCCcccCCceeeEe
Q psy15190 91 TQNFVDNIQRLCGLDFSQHPTNILFT 116 (117)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (117)
.... ..+..+......+.|.++.|.
T Consensus 336 d~~~-g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 336 DQAT-GLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CTTT-CCEEECSCCEECSSEEEEEEE
T ss_pred ECCC-CcEeecceeeeCCCCeEEEEc
Confidence 4321 122222222233467777774
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.35 E-value=7.6e-07 Score=61.24 Aligned_cols=90 Identities=10% Similarity=0.034 Sum_probs=61.8
Q ss_pred Ceeeec---ccCeEEcCCCC---CeeEEEECCCCCEEEEEeCC---------CcEEEecCCCCceeeEecCcceEecccc
Q psy15190 1 MLVWAQ---QPCVTVGGHFG---PVRDIQWEPSGQFIISVSED---------QTTRLHAPFVGKNTWYEMARPQVHGYDL 65 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~---~v~~i~~~~~~~~~~s~~~d---------~~~~~wd~~~~~~~~~~~~~~~~~~~~i 65 (117)
|++||. +....+.+|.. .+.+++|+|+|+.+++++.+ +.+.+||+..+.. ........+...+
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKL 116 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCC
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccc
Confidence 468888 45556666654 48999999999999999875 6777999976652 1111111233346
Q ss_pred EEEEEccCc-EEEEecCCCeEEEeeCChh
Q psy15190 66 TCLALISTF-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 66 ~~~~~~~~~-~~~s~~~d~~i~iw~~~~~ 93 (117)
..+++++++ .+++++. +.|++||...+
T Consensus 117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp SBCCBCSSTTCEEEEET-TEEEEESSSSS
T ss_pred cccEECCCCCEEEEEEC-CeEEEEECCCC
Confidence 777888865 5666654 79999998653
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.34 E-value=8.7e-06 Score=50.84 Aligned_cols=92 Identities=11% Similarity=-0.029 Sum_probs=57.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEE-EEeCCCc-EEEecCCCCceeeEecCcceEeccccEEEEEccCc-
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFII-SVSEDQT-TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF- 74 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~-s~~~d~~-~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 74 (117)
|.+||. +....+.. ......+.|+|+|+.++ +...++. +.+|++...........+....+.....+++++++
T Consensus 110 i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred EEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 467887 44444433 34568999999998554 4455678 99999875431111101111223445777888755
Q ss_pred -EEEEecCCCeEEEeeCChh
Q psy15190 75 -VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 75 -~~~s~~~d~~i~iw~~~~~ 93 (117)
+++++..++.+++||+...
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp EEEEEETTTTEEEEEECSST
T ss_pred EEEEEeCCCCeEEEEECCCC
Confidence 4566667999999998653
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.33 E-value=5.7e-06 Score=51.67 Aligned_cols=89 Identities=8% Similarity=0.004 Sum_probs=56.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeC-CCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-E
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSE-DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-V 75 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~-d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 75 (117)
|++||. +....+..+...+ .++|+|+++.++.++. ++.+.+||...+... ......+.....++++++++ .
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK---VVAIQEGQSSMADVDITPDDQF 97 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE---EEEEEECSSCCCCEEECTTSSE
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee---EEecccCCCCccceEECCCCCE
Confidence 467887 4445555555556 9999999997666655 889999999776520 11111222333337777754 4
Q ss_pred EEEecCC-C--eEEEeeCChh
Q psy15190 76 FASGADE-K--VVRAFRTTQN 93 (117)
Q Consensus 76 ~~s~~~d-~--~i~iw~~~~~ 93 (117)
++++..+ + .|.+||+...
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTT
T ss_pred EEEecCCCCcccEEEEECCCC
Confidence 5554444 3 9999999653
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.31 E-value=8.5e-06 Score=51.16 Aligned_cols=92 Identities=9% Similarity=-0.038 Sum_probs=61.0
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--EE
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--VF 76 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~ 76 (117)
.+||. +....+..+...+..+.|+|+++.++.++.++.+.+||...+............+......+++.+++ ++
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 46776 44555554555678899999999999999999999999987763222111001122345567777643 45
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
++...++.+.+||....
T Consensus 247 ~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEESSSSEEEEEETTTC
T ss_pred EEeCCCCEEEEEECCCC
Confidence 55556799999998643
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.30 E-value=6.8e-06 Score=51.80 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=58.8
Q ss_pred Ceeeec-----ccCeEEcCCCCCeeEEEECCCCCEEEEEe-CCCcEEEecCCCCceeeEecCcceE---------ecccc
Q psy15190 1 MLVWAQ-----QPCVTVGGHFGPVRDIQWEPSGQFIISVS-EDQTTRLHAPFVGKNTWYEMARPQV---------HGYDL 65 (117)
Q Consensus 1 v~~w~~-----~~~~~~~~h~~~v~~i~~~~~~~~~~s~~-~d~~~~~wd~~~~~~~~~~~~~~~~---------~~~~i 65 (117)
|.+|++ +....+..+...+..++|+|+|+.+++++ .++++.+|++.... .......... ....+
T Consensus 65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG-ALTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS-CEEEEEEEECCCCCSSTTCSSCCE
T ss_pred EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC-CeeecceeecCCCCCCccccCCCc
Confidence 356777 23344445677788999999999888887 67899999985322 0000000000 11236
Q ss_pred EEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 66 TCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 66 ~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
.++++++++ ++++...++.+++|++.
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 678888744 56666778999999986
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.29 E-value=1.6e-05 Score=49.40 Aligned_cols=74 Identities=4% Similarity=-0.224 Sum_probs=54.1
Q ss_pred cCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 13 GGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 13 ~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
..+...+..++|+|+++.++.+ ++.+.+||...++.... . .....+.++++++++ .+++++.++.|++||+.
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~----~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKR----V-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEE----E-ECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcce----e-cCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 3455678889999999998887 68999999977652111 1 123456778888744 57777889999999986
Q ss_pred hh
Q psy15190 92 QN 93 (117)
Q Consensus 92 ~~ 93 (117)
..
T Consensus 310 ~~ 311 (337)
T 1pby_B 310 TL 311 (337)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 145
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.28 E-value=9.2e-06 Score=52.86 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=60.7
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
|++||+ ........|...+.++++.+. .++.+..||++.+||+..+... .....+.|+++++.+ ++
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------~~~~~Vs~v~WSpkG-~~ 176 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------QLAQNVTSFDVTNSQ-LA 176 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------EEEESEEEEEECSSE-EE
T ss_pred EEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------cccCCceEEEEcCCc-eE
Confidence 468887 222334567777888877654 3888999999999999765411 145688999999988 67
Q ss_pred EecCCCeEEEeeCCh
Q psy15190 78 SGADEKVVRAFRTTQ 92 (117)
Q Consensus 78 s~~~d~~i~iw~~~~ 92 (117)
.|..||++++|++..
T Consensus 177 vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 177 VLLKDRSFQSFAWRN 191 (388)
T ss_dssp EEETTSCEEEEEEET
T ss_pred EEEcCCcEEEEcCCC
Confidence 789999999998753
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.27 E-value=5.3e-07 Score=62.09 Aligned_cols=86 Identities=10% Similarity=0.016 Sum_probs=59.8
Q ss_pred Ceeeec---ccCeEEcCCCC---CeeEEEECCCCCEEEEEeC---------CCcEEEecCCCCceeeEecCcceEecccc
Q psy15190 1 MLVWAQ---QPCVTVGGHFG---PVRDIQWEPSGQFIISVSE---------DQTTRLHAPFVGKNTWYEMARPQVHGYDL 65 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~---~v~~i~~~~~~~~~~s~~~---------d~~~~~wd~~~~~~~~~~~~~~~~~~~~i 65 (117)
|++||. +....+.+|.. .+..++|+|+|+.++.++. |+.+++||+..+.... ..+ ....+
T Consensus 38 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~--~~~---l~~~~ 112 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR--GNE---LPRPI 112 (719)
T ss_dssp EEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--SSC---CCSSB
T ss_pred EEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc--cee---cCccc
Confidence 467888 44444444433 4889999999999998876 7899999997765100 011 12457
Q ss_pred EEEEEccCc-EEEEecCCCeEEEeeCCh
Q psy15190 66 TCLALISTF-VFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 66 ~~~~~~~~~-~~~s~~~d~~i~iw~~~~ 92 (117)
..++++|++ .++++ .++.|++|+...
T Consensus 113 ~~~~~SPDG~~la~~-~~~~i~~~~~~~ 139 (719)
T 1z68_A 113 QYLCWSPVGSKLAYV-YQNNIYLKQRPG 139 (719)
T ss_dssp CCEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred ccceECCCCCEEEEE-ECCeEEEEeCCC
Confidence 778899866 45555 478999999854
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.24 E-value=6.2e-06 Score=55.69 Aligned_cols=87 Identities=9% Similarity=-0.041 Sum_probs=61.1
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEe-------CCCcEEEecCCCCceeeEec--C---cceEeccccEEEEEccCc
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVS-------EDQTTRLHAPFVGKNTWYEM--A---RPQVHGYDLTCLALISTF 74 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~-------~d~~~~~wd~~~~~~~~~~~--~---~~~~~~~~i~~~~~~~~~ 74 (117)
++++++.+|.+.+..++++|+++.+++++ .+.++.+||..+....+... . ....++..+..+.+++++
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCC
Confidence 35677888888889999999999999987 27799999998776221111 0 012235667788888754
Q ss_pred -E-EEEe----cCCCeEEEeeCChh
Q psy15190 75 -V-FASG----ADEKVVRAFRTTQN 93 (117)
Q Consensus 75 -~-~~s~----~~d~~i~iw~~~~~ 93 (117)
. +++. +.|+.|.+||.++.
T Consensus 491 ~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 491 DEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp SEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CEEEEEeecCCCCCCeEEEEECCCc
Confidence 3 3332 25899999998654
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.18 E-value=1.6e-05 Score=49.91 Aligned_cols=71 Identities=15% Similarity=-0.025 Sum_probs=50.6
Q ss_pred eeEEEECCCCCEEEEEe--CCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 19 VRDIQWEPSGQFIISVS--EDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~--~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+..+.|+|+++.++.++ .++.+.+||...+..... ....+.....+.+++ +..++.++.++.+.+||....
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA----IQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE----ECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE----ecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 68899999999776665 478899999987752222 111234456677776 446777788999999998654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.16 E-value=2.5e-06 Score=58.67 Aligned_cols=46 Identities=7% Similarity=0.080 Sum_probs=36.1
Q ss_pred Ceeeec--ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCC
Q psy15190 1 MLVWAQ--QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFV 47 (117)
Q Consensus 1 v~~w~~--~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~ 47 (117)
|++||+ .....+..+...+..++|+|+|+.++.+ .|+.+.+||+..
T Consensus 103 i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp EEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred EEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 467888 3334445667778899999999999885 688999999976
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.14 E-value=6.6e-06 Score=55.49 Aligned_cols=69 Identities=7% Similarity=-0.068 Sum_probs=51.8
Q ss_pred eEEEECCCCCEEEEEeCC----CcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCC--eEEEeeCCh
Q psy15190 20 RDIQWEPSGQFIISVSED----QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEK--VVRAFRTTQ 92 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d----~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~--~i~iw~~~~ 92 (117)
.++.|+|+|+.+++++.| ..+.+||+..+... +...+...+...++++++ .++++..++ .|.+||+..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-----~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-----VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-----EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-----EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 789999999999988877 77999998766511 122344556888899865 577777788 899999865
Q ss_pred h
Q psy15190 93 N 93 (117)
Q Consensus 93 ~ 93 (117)
+
T Consensus 228 ~ 228 (582)
T 3o4h_A 228 G 228 (582)
T ss_dssp C
T ss_pred C
Confidence 3
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.13 E-value=9.8e-06 Score=55.97 Aligned_cols=48 Identities=13% Similarity=0.220 Sum_probs=39.3
Q ss_pred Ceeeec--c---cCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 1 MLVWAQ--Q---PCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 1 v~~w~~--~---~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
|++||+ . ....+..|...+..++|+|+|+.++.++. +.+.+||+..+.
T Consensus 131 i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~ 183 (741)
T 2ecf_A 131 LYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGR 183 (741)
T ss_dssp EEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTE
T ss_pred EEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCC
Confidence 467887 4 56677778888999999999999998874 589999997664
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.10 E-value=3.2e-05 Score=48.74 Aligned_cols=73 Identities=12% Similarity=0.044 Sum_probs=48.0
Q ss_pred CeeEEEECCCCCEE-EEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEe-cCCCeEEEeeCC
Q psy15190 18 PVRDIQWEPSGQFI-ISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASG-ADEKVVRAFRTT 91 (117)
Q Consensus 18 ~v~~i~~~~~~~~~-~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~-~~d~~i~iw~~~ 91 (117)
.+..++|+|+|+++ ++...++.+.+|++.... ..........++.....+++++++ .++++ ..++.+.+|++.
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 47889999999976 566678999999986322 111111122234456788888855 45554 456899999653
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.09 E-value=9.4e-06 Score=58.42 Aligned_cols=85 Identities=8% Similarity=-0.061 Sum_probs=60.9
Q ss_pred Ceeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCC----------cEEEecCCCCceeeEecCcceEeccccEE
Q psy15190 1 MLVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQ----------TTRLHAPFVGKNTWYEMARPQVHGYDLTC 67 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~----------~~~~wd~~~~~~~~~~~~~~~~~~~~i~~ 67 (117)
|++||+ +......+|...+..++|+|+|+++++++.++ .+++||+..+. .. ....+...+..
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~---~l~~~~~~~~~ 476 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IF---AATTENSHDYA 476 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EE---ECSCSSSBEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc--EE---EeeCCCcccCC
Confidence 468888 44555558989999999999999998887654 89999997654 11 11124455667
Q ss_pred EEEccCc-EEEEecCCCeEEEeeC
Q psy15190 68 LALISTF-VFASGADEKVVRAFRT 90 (117)
Q Consensus 68 ~~~~~~~-~~~s~~~d~~i~iw~~ 90 (117)
+++++++ .+++++.++..++|+.
T Consensus 477 ~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 477 PAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EEECTTSCEEEEEESCCCCCEECS
T ss_pred ceEcCCCCEEEEEecccCCcCcch
Confidence 7788755 5777777777777764
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.06 E-value=5.7e-05 Score=46.93 Aligned_cols=93 Identities=13% Similarity=0.056 Sum_probs=58.1
Q ss_pred Ceeeec---ccCeEEcC-CCC-CeeEEEECCCCCEE-EEEeCCCcEEEecCCCCceeeE-ecCcceEeccccEEEEEccC
Q psy15190 1 MLVWAQ---QPCVTVGG-HFG-PVRDIQWEPSGQFI-ISVSEDQTTRLHAPFVGKNTWY-EMARPQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~---~~~~~~~~-h~~-~v~~i~~~~~~~~~-~s~~~d~~~~~wd~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 73 (117)
|++||. +....+.. +.. .+..++|+|+++.+ +++..++.+.+||..++..... .......+...+..++++++
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 92 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCC
Confidence 467887 44444432 222 47889999999765 5666788999999987652221 11100012235667788775
Q ss_pred c-EEEEec------------CCCeEEEeeCChh
Q psy15190 74 F-VFASGA------------DEKVVRAFRTTQN 93 (117)
Q Consensus 74 ~-~~~s~~------------~d~~i~iw~~~~~ 93 (117)
+ .++++. .++.|.+||....
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred CCEEEEEecccccccccccccCceEEEEECCCC
Confidence 5 566554 5799999998653
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.05 E-value=4.9e-05 Score=47.51 Aligned_cols=92 Identities=11% Similarity=-0.051 Sum_probs=57.9
Q ss_pred Ceeeec---ccCeEEcCCC-CCeeEEEECCCCCEE-EEEeCCCcEEEecCCCCceeeEec-Cc-ceEeccccEEEEEccC
Q psy15190 1 MLVWAQ---QPCVTVGGHF-GPVRDIQWEPSGQFI-ISVSEDQTTRLHAPFVGKNTWYEM-AR-PQVHGYDLTCLALIST 73 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~-~~v~~i~~~~~~~~~-~s~~~d~~~~~wd~~~~~~~~~~~-~~-~~~~~~~i~~~~~~~~ 73 (117)
|++||. +....+..+. ..+..++|+|+++.+ ++...++.+.+||..++....... .. ....+..+..++++++
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence 467887 4445554433 257789999999865 556678899999998765222110 00 0001233567778775
Q ss_pred c-EEEEecCC------------CeEEEeeCCh
Q psy15190 74 F-VFASGADE------------KVVRAFRTTQ 92 (117)
Q Consensus 74 ~-~~~s~~~d------------~~i~iw~~~~ 92 (117)
+ .+++++.+ +.|.+||+..
T Consensus 103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred CCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 4 56666644 8999999865
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.04 E-value=5e-05 Score=47.31 Aligned_cols=96 Identities=6% Similarity=0.028 Sum_probs=54.9
Q ss_pred CeeEEEECCCCCEEE-EEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEec-CCCeEEEeeCChhH
Q psy15190 18 PVRDIQWEPSGQFII-SVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGA-DEKVVRAFRTTQNF 94 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~-s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~-~d~~i~iw~~~~~~ 94 (117)
.+..++|+|+++.++ +...++.+.+||+.............. ....+..+++++++ .+++++ .++.+.+|++....
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 466899999998776 555789999999973211111111111 12336677887744 455555 68999999653210
Q ss_pred HHhhhhhcCCCcccCCceeeE
Q psy15190 95 VDNIQRLCGLDFSQHPTNILF 115 (117)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~ 115 (117)
..+..+.....+..|..+.|
T Consensus 311 -g~~~~~~~~~~g~~p~~i~~ 330 (343)
T 1ri6_A 311 -GLLHEKGRYAVGQGPMWVVV 330 (343)
T ss_dssp -TEEEEEEEEECSSSCCEEEE
T ss_pred -ceeeEccccccCCCCeeEEE
Confidence 11222223333445666655
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.98 E-value=3.8e-05 Score=52.87 Aligned_cols=74 Identities=9% Similarity=0.121 Sum_probs=46.8
Q ss_pred eEEEECCCCCEEEEEeCCC----------------------------------cEEEecCCCCce--eeEecCcceEecc
Q psy15190 20 RDIQWEPSGQFIISVSEDQ----------------------------------TTRLHAPFVGKN--TWYEMARPQVHGY 63 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d~----------------------------------~~~~wd~~~~~~--~~~~~~~~~~~~~ 63 (117)
..+.|+|+|+.++.++.|. .+++||+..+.. ..........+..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999999999887653 677888865541 1110000111245
Q ss_pred ccEEEEEccCcE-EEEec----CCCeEEEeeCChh
Q psy15190 64 DLTCLALISTFV-FASGA----DEKVVRAFRTTQN 93 (117)
Q Consensus 64 ~i~~~~~~~~~~-~~s~~----~d~~i~iw~~~~~ 93 (117)
.+..+++++++. +++.. .+..|.+||+..+
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 677888999775 43432 3468999998653
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.94 E-value=7.9e-05 Score=47.21 Aligned_cols=77 Identities=17% Similarity=0.087 Sum_probs=49.2
Q ss_pred CCCCeeEEEECCCCCEEEEEeCC----CcEEEecCCCCceeeEecCcceEeccccEEEEEccCcE-EEEecCCCeEEEee
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSED----QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFV-FASGADEKVVRAFR 89 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d----~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~i~iw~ 89 (117)
+......++|+|+|+.+++++.+ +.+.+|++...............++.....+++ .+.. +++...++.+.+|+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEE
Confidence 55667789999999999998886 789999886531111111111112334455556 5444 55555789999999
Q ss_pred CCh
Q psy15190 90 TTQ 92 (117)
Q Consensus 90 ~~~ 92 (117)
+..
T Consensus 127 ~~~ 129 (361)
T 3scy_A 127 IGQ 129 (361)
T ss_dssp BCT
T ss_pred eCC
Confidence 853
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.92 E-value=0.00033 Score=42.92 Aligned_cols=85 Identities=12% Similarity=0.091 Sum_probs=54.2
Q ss_pred eeeec--ccCeEEcCC--CCCeeEEEECCCCCEEEEEeCCC-cEEEecCCCCceeeEecCcceEec--cccEEEEEccCc
Q psy15190 2 LVWAQ--QPCVTVGGH--FGPVRDIQWEPSGQFIISVSEDQ-TTRLHAPFVGKNTWYEMARPQVHG--YDLTCLALISTF 74 (117)
Q Consensus 2 ~~w~~--~~~~~~~~h--~~~v~~i~~~~~~~~~~s~~~d~-~~~~wd~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~ 74 (117)
++|+. +....+..+ ...+..++++++|+.+++...++ .+.+|+.. +..... ...+. .....+++.+++
T Consensus 188 ~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~----~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 188 KVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISA----LESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp EEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEE----EEESSCCSCEEEEEEETTT
T ss_pred EEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEE----EcccCCCCcceeEEECCCC
Confidence 45555 333444332 35688999999999988888776 99999964 331111 11111 224567777766
Q ss_pred EEEEecCCCeEEEeeCC
Q psy15190 75 VFASGADEKVVRAFRTT 91 (117)
Q Consensus 75 ~~~s~~~d~~i~iw~~~ 91 (117)
.++.++.|+.|++|++.
T Consensus 263 ~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 263 SVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEEEETTTEEEEEECS
T ss_pred cEEEECCCCeEEEEEcc
Confidence 54444679999999974
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.89 E-value=4.5e-05 Score=52.47 Aligned_cols=75 Identities=7% Similarity=0.047 Sum_probs=50.9
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCC-----cEEEecCCCC-ceeeEecCcceEecc---ccEEEEEcc--Cc-EEEEecC
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQ-----TTRLHAPFVG-KNTWYEMARPQVHGY---DLTCLALIS--TF-VFASGAD 81 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~-----~~~~wd~~~~-~~~~~~~~~~~~~~~---~i~~~~~~~--~~-~~~s~~~ 81 (117)
.|...+..++|+|+|+.++.++.+. .+.+||..++ ..... .. ..... .+..+.+++ ++ .++++..
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~ 331 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL--FV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRR 331 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE--EE-EECSSCCCCCSCCEECTTCSSEEEEEECT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE--EE-ccCCCeECccCCceeecCCCCEEEEEEcc
Confidence 4566789999999999999887775 8999999876 31110 00 01111 124567776 55 4777788
Q ss_pred CCeEEEeeCC
Q psy15190 82 EKVVRAFRTT 91 (117)
Q Consensus 82 d~~i~iw~~~ 91 (117)
|+.+++|++.
T Consensus 332 ~g~~~l~~~~ 341 (706)
T 2z3z_A 332 DGWNHLYLYD 341 (706)
T ss_dssp TSSCEEEEEE
T ss_pred CCccEEEEEE
Confidence 8999999774
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.82 E-value=3.8e-05 Score=53.44 Aligned_cols=87 Identities=11% Similarity=0.003 Sum_probs=60.0
Q ss_pred Ceeeec---ccCeEEcCCCCC-----eeEEEECCCCCEEEEEeCC---------CcEEEecCCCCceeeEecCcceEecc
Q psy15190 1 MLVWAQ---QPCVTVGGHFGP-----VRDIQWEPSGQFIISVSED---------QTTRLHAPFVGKNTWYEMARPQVHGY 63 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h~~~-----v~~i~~~~~~~~~~s~~~d---------~~~~~wd~~~~~~~~~~~~~~~~~~~ 63 (117)
|++|+. +....+.+|... ...+.|+|+|+.++.++.+ +.+.+||+.++.. .+...+..
T Consensus 38 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~-----~~l~~~~~ 112 (740)
T 4a5s_A 38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-----ITEERIPN 112 (740)
T ss_dssp EEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-----CCSSCCCT
T ss_pred EEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE-----EEcccCCC
Confidence 468888 455566666532 2458899999999998876 4455999987651 11223455
Q ss_pred ccEEEEEccCc-EEEEecCCCeEEEeeCChh
Q psy15190 64 DLTCLALISTF-VFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 64 ~i~~~~~~~~~-~~~s~~~d~~i~iw~~~~~ 93 (117)
.+...+++|++ .++.+ .|+.|.+|+...+
T Consensus 113 ~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp TEEEEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred cceeeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 67888899966 45555 5789999998543
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.78 E-value=0.00055 Score=43.63 Aligned_cols=75 Identities=9% Similarity=0.123 Sum_probs=50.0
Q ss_pred CCCCeeEEEECCCCCEEEEEeC-CCcEEEecCC-CCceeeEecCcceE--eccccEEEEEccCc-EEEEec-CCCeEEEe
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSE-DQTTRLHAPF-VGKNTWYEMARPQV--HGYDLTCLALISTF-VFASGA-DEKVVRAF 88 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~-d~~~~~wd~~-~~~~~~~~~~~~~~--~~~~i~~~~~~~~~-~~~s~~-~d~~i~iw 88 (117)
+...+..+.|+|+|+++++++. +..+.+|++. .+.... ...... ++.....+++++++ .+++++ .++.+.+|
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~--~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL--VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE--EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE--eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 4567899999999998877654 6789999997 454211 111111 23456777888865 454444 57899999
Q ss_pred eCC
Q psy15190 89 RTT 91 (117)
Q Consensus 89 ~~~ 91 (117)
++.
T Consensus 221 ~~~ 223 (365)
T 1jof_A 221 VID 223 (365)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.77 E-value=0.00049 Score=43.02 Aligned_cols=83 Identities=8% Similarity=0.038 Sum_probs=57.1
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCC---
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADE--- 82 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d--- 82 (117)
+....+..+...+..+.|+++|+.++++..++.+.+||...+...... ......+..+++.+++ ++++...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~~~~i~~~~dg~l~v~~~~~~~~ 110 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF----VSHKANPAAIKIHKDGRLFVCYLGDFKS 110 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE----ECSSSSEEEEEECTTSCEEEEECTTSSS
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe----eCCCCCcceEEECCCCcEEEEeCCCCCC
Confidence 334455667777899999999998888888999999998765421110 0123557788887755 45555555
Q ss_pred -CeEEEeeCChh
Q psy15190 83 -KVVRAFRTTQN 93 (117)
Q Consensus 83 -~~i~iw~~~~~ 93 (117)
+.|.+||....
T Consensus 111 ~~~i~~~d~~~~ 122 (333)
T 2dg1_A 111 TGGIFAATENGD 122 (333)
T ss_dssp CCEEEEECTTSC
T ss_pred CceEEEEeCCCC
Confidence 68999998643
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.76 E-value=0.00023 Score=44.41 Aligned_cols=71 Identities=11% Similarity=-0.117 Sum_probs=51.4
Q ss_pred CCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCCeEEEeeCChh
Q psy15190 16 FGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 16 ~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
...+..++|+| +++.++.+ ++.+.+||+.+++.... ......+..++++++ ..+++++.++.|++||....
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA-----ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE-----EECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE-----EcCCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 34577889999 99998888 88999999987652111 012344667888775 35666788899999999653
No 165
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.68 E-value=0.0003 Score=45.83 Aligned_cols=70 Identities=6% Similarity=-0.114 Sum_probs=51.3
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
.+.+ |..+.| ++..++.+ .++.+++||+..... ......+...+..+.+.++. ++.+..||.+.+||++.
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~----~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSE----FRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRT 155 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC----EEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTT
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc----cCccceeecceeeEEecCCC-EEEEECCCCEEEEEccC
Confidence 4566 999999 88998888 889999999976641 11112334456666666654 77889999999999964
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.62 E-value=0.00063 Score=46.50 Aligned_cols=79 Identities=6% Similarity=-0.030 Sum_probs=50.0
Q ss_pred eEEc-CCCCCeeEEEECCCCCEEEEEeCCC--------cEEEecCC-CCceeeEecCcceE-eccccEEEEEccCc-EEE
Q psy15190 10 VTVG-GHFGPVRDIQWEPSGQFIISVSEDQ--------TTRLHAPF-VGKNTWYEMARPQV-HGYDLTCLALISTF-VFA 77 (117)
Q Consensus 10 ~~~~-~h~~~v~~i~~~~~~~~~~s~~~d~--------~~~~wd~~-~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~ 77 (117)
..+. .+...+..++|+|+|+.++.++.+. .+.+||+. .+.. ....+... +...+..+.+++++ +++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~--~~~~~l~~~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF--ADTRTLLGGPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE--EEEEEEEEETTBCEEEEEECTTSCEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc--cccEEeCCCCCceEcceEECCCCeEEE
Confidence 4444 5556678899999999998877553 68899987 4410 00111111 24566778888754 567
Q ss_pred EecCCC--eEEEeeC
Q psy15190 78 SGADEK--VVRAFRT 90 (117)
Q Consensus 78 s~~~d~--~i~iw~~ 90 (117)
++..++ .|.+||.
T Consensus 258 ~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 258 ATDRTGWWNLHRVDP 272 (662)
T ss_dssp EECTTSSCEEEEECT
T ss_pred EECCCCCeEEEEEEC
Confidence 777788 4555555
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.56 E-value=0.00027 Score=44.99 Aligned_cols=82 Identities=9% Similarity=-0.105 Sum_probs=52.5
Q ss_pred cCeEEcCCCCCeeE-----EEECCCCCEEEEEeC-CCc--EEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEE
Q psy15190 8 PCVTVGGHFGPVRD-----IQWEPSGQFIISVSE-DQT--TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFAS 78 (117)
Q Consensus 8 ~~~~~~~h~~~v~~-----i~~~~~~~~~~s~~~-d~~--~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s 78 (117)
....+..|...... .+|+|+|+.++.++. ++. +.+||+..+.... . ...+...+....+++++ .++.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~--l--t~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ--L--TEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE--C--CCSSCBCSSSCEECTTSSEEEE
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE--e--eeCCCCCccceEEcCCCCEEEE
Confidence 44555566655555 789999999988887 664 6667776554111 1 01122223345677744 6888
Q ss_pred ecCCCeEEEeeCChh
Q psy15190 79 GADEKVVRAFRTTQN 93 (117)
Q Consensus 79 ~~~d~~i~iw~~~~~ 93 (117)
+..++.+.+||+..+
T Consensus 98 ~~~~~~l~~~d~~~g 112 (388)
T 3pe7_A 98 VKDGRNLMRVDLATL 112 (388)
T ss_dssp EETTTEEEEEETTTC
T ss_pred EeCCCeEEEEECCCC
Confidence 888889999998653
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.53 E-value=0.00043 Score=44.34 Aligned_cols=90 Identities=7% Similarity=-0.097 Sum_probs=55.6
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeC----------CCcEEEecCCCCceeeE--ecCcceEeccccE
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSE----------DQTTRLHAPFVGKNTWY--EMARPQVHGYDLT 66 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~----------d~~~~~wd~~~~~~~~~--~~~~~~~~~~~i~ 66 (117)
.+||. +....+..+..+ .+.|+|+|++++.+.. ++++.+||..+.+.... ........+....
T Consensus 34 ~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~ 111 (361)
T 2oiz_A 34 HVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG 111 (361)
T ss_dssp EEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG
T ss_pred EEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc
Confidence 46776 445555555444 8999999999988763 66799999876652111 1100001223345
Q ss_pred EEEEccCc-EEEEec--CCCeEEEeeCChh
Q psy15190 67 CLALISTF-VFASGA--DEKVVRAFRTTQN 93 (117)
Q Consensus 67 ~~~~~~~~-~~~s~~--~d~~i~iw~~~~~ 93 (117)
.+++++++ .++++. .++.|.+||....
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 66777754 454443 3689999998654
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.52 E-value=7.3e-05 Score=51.60 Aligned_cols=69 Identities=10% Similarity=0.056 Sum_probs=47.0
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEecc---ccEEEEEccCc-EEEEecC---------CCeEE
Q psy15190 20 RDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGY---DLTCLALISTF-VFASGAD---------EKVVR 86 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~-~~~s~~~---------d~~i~ 86 (117)
..++|+|+|+++++ +.|+++++||...+..... ...+.. .+.++++++++ .+++++. ++.++
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTI----LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEE----ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEE----EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 37899999965554 5699999999977651111 001111 37888998855 4666655 68999
Q ss_pred EeeCChh
Q psy15190 87 AFRTTQN 93 (117)
Q Consensus 87 iw~~~~~ 93 (117)
+||+..+
T Consensus 94 ~~d~~~g 100 (719)
T 1z68_A 94 IYDLSNG 100 (719)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9998754
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.47 E-value=0.00031 Score=48.62 Aligned_cols=76 Identities=7% Similarity=-0.063 Sum_probs=50.9
Q ss_pred CCCCCeeEEEECCCCCEEE-----EEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCe---
Q psy15190 14 GHFGPVRDIQWEPSGQFII-----SVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKV--- 84 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~-----s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~--- 84 (117)
+|...+..++|+|+|+.++ +++++.++++||+..+... . .. .........+++++++ .++.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~-~--~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS-K--VD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC-S--SC-CBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc-C--Cc-ccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 3555688999999999988 5566678999999877511 0 10 0111112567788754 5777777665
Q ss_pred ----------EEEeeCChh
Q psy15190 85 ----------VRAFRTTQN 93 (117)
Q Consensus 85 ----------i~iw~~~~~ 93 (117)
|++|++..+
T Consensus 194 ~~~~~~~~~~v~~~~l~t~ 212 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTE 212 (695)
T ss_dssp CGGGGGGGCEEEEEETTSC
T ss_pred ccccCCCCCEEEEEECCCC
Confidence 999998654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.41 E-value=0.0077 Score=37.83 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=50.0
Q ss_pred CCCCCeeEEEECC-CCCEEEEEe-CCCcEEEecCCCCceeeEec--Ccc----eEeccccEEEEEccC--cEEEEecCCC
Q psy15190 14 GHFGPVRDIQWEP-SGQFIISVS-EDQTTRLHAPFVGKNTWYEM--ARP----QVHGYDLTCLALIST--FVFASGADEK 83 (117)
Q Consensus 14 ~h~~~v~~i~~~~-~~~~~~s~~-~d~~~~~wd~~~~~~~~~~~--~~~----~~~~~~i~~~~~~~~--~~~~s~~~d~ 83 (117)
++......++++| ++..+++.+ .++.+++|+. .+....... ... ...-.....+++.++ .++++...++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~ 218 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG 218 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence 4455688999999 888888886 6889999994 443111100 000 001122456777664 4577777899
Q ss_pred eEEEeeCC
Q psy15190 84 VVRAFRTT 91 (117)
Q Consensus 84 ~i~iw~~~ 91 (117)
.|++|+..
T Consensus 219 ~I~~~~~~ 226 (329)
T 3fvz_A 219 RIQCFKTD 226 (329)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 99999986
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.36 E-value=0.00049 Score=44.05 Aligned_cols=44 Identities=7% Similarity=0.076 Sum_probs=36.8
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCC
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVG 48 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~ 48 (117)
.+||. +.+..+..+. +..+.|+|+|+++++++. +++.+||..++
T Consensus 289 ~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 289 WVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 46777 6667777776 889999999999988886 99999999877
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.32 E-value=0.0026 Score=38.88 Aligned_cols=76 Identities=7% Similarity=-0.030 Sum_probs=49.7
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCC-eEEEeeCC
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEK-VVRAFRTT 91 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~-~i~iw~~~ 91 (117)
++...+..++++++|+.+++...++.+++||..... ... .... ........+++.++ .++++...++ .|.+|+..
T Consensus 161 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~-~~~~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-LRQ-IGGE-GITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-EEE-ESCT-TTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-EEE-EccC-CccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 344568899999999988888888999999974321 111 1000 01134466777664 4566666675 99999975
Q ss_pred h
Q psy15190 92 Q 92 (117)
Q Consensus 92 ~ 92 (117)
.
T Consensus 238 g 238 (286)
T 1q7f_A 238 G 238 (286)
T ss_dssp S
T ss_pred C
Confidence 4
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.29 E-value=0.00091 Score=42.53 Aligned_cols=47 Identities=6% Similarity=-0.096 Sum_probs=34.9
Q ss_pred eeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 3 VWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 3 ~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
+||. +......++...+..+.|+|+|+.++.++.+..+.+||+..+.
T Consensus 64 ~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 64 LLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp EEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred EEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4555 3333344555555567899999999999999999999998765
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.25 E-value=0.0006 Score=47.52 Aligned_cols=75 Identities=5% Similarity=0.111 Sum_probs=46.8
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeE-ecCcceEeccccEEEEEccCc-EEEEecCC---------CeE
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWY-EMARPQVHGYDLTCLALISTF-VFASGADE---------KVV 85 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d---------~~i 85 (117)
.....+.|+|+|++++++ |+++++||+.++..... ..............+++++++ .++.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999988886 89999999987762111 000000011112336778755 46666655 556
Q ss_pred EEeeCChh
Q psy15190 86 RAFRTTQN 93 (117)
Q Consensus 86 ~iw~~~~~ 93 (117)
.+||+..+
T Consensus 95 ~~~d~~~~ 102 (740)
T 4a5s_A 95 DIYDLNKR 102 (740)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 79999764
No 176
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.23 E-value=0.00084 Score=42.78 Aligned_cols=75 Identities=13% Similarity=0.004 Sum_probs=45.7
Q ss_pred CeeEEE-ECCCCCEEEEEeCCC------cEEEecCC-CCceeeEecCcceEeccccEEEEEcc----CcEEEEecC-CCe
Q psy15190 18 PVRDIQ-WEPSGQFIISVSEDQ------TTRLHAPF-VGKNTWYEMARPQVHGYDLTCLALIS----TFVFASGAD-EKV 84 (117)
Q Consensus 18 ~v~~i~-~~~~~~~~~s~~~d~------~~~~wd~~-~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~s~~~-d~~ 84 (117)
.+..++ |+|+|++++++..+. ++.+|++. .+..... ......+......+++++ +..+++++. ++.
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~-~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~ 333 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ-LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE-EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe-eeeeecCCCCcccceecCCCcCCCEEEEEEcCCCe
Confidence 478899 999999887765432 79999985 3331110 000001222344455555 556666665 589
Q ss_pred EEEeeCChh
Q psy15190 85 VRAFRTTQN 93 (117)
Q Consensus 85 i~iw~~~~~ 93 (117)
+++|++...
T Consensus 334 v~v~~~~~~ 342 (365)
T 1jof_A 334 LEIYRWKDE 342 (365)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEchh
Confidence 999998543
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.18 E-value=0.0046 Score=38.04 Aligned_cols=78 Identities=10% Similarity=-0.042 Sum_probs=54.8
Q ss_pred CeEEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEE
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVR 86 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~ 86 (117)
...+..+......+.|+|+++ .+++...++.+..|+...+...+. .....+..+++.+++ ++++...++.|.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEM------HPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEE------SSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEE------CCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 345555666788999999998 778888899999999875521111 133456778887754 555555678999
Q ss_pred EeeCCh
Q psy15190 87 AFRTTQ 92 (117)
Q Consensus 87 iw~~~~ 92 (117)
+||...
T Consensus 94 ~~d~~~ 99 (296)
T 3e5z_A 94 RQREPG 99 (296)
T ss_dssp EECSTT
T ss_pred EEcCCC
Confidence 999844
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.17 E-value=0.002 Score=44.64 Aligned_cols=74 Identities=9% Similarity=0.011 Sum_probs=49.5
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCC-----cEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCe----
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSEDQ-----TTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKV---- 84 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d~-----~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~---- 84 (117)
|...+..++|+|+|+.++.++.++ .+++||+..+..... ......+..+++++++ .++.+..++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----VLERVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----EEEEECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----cccCcccceEEEEeCCCEEEEEEECCccccc
Confidence 444578899999999988765543 899999987752111 1122235667888754 5666666554
Q ss_pred ------------EEEeeCChh
Q psy15190 85 ------------VRAFRTTQN 93 (117)
Q Consensus 85 ------------i~iw~~~~~ 93 (117)
|.+|++..+
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSC
T ss_pred cccccccCCCCEEEEEECCCC
Confidence 999998653
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.05 E-value=0.01 Score=35.71 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=51.4
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
..+..++++++|..+++...++.+.+|+.......... .........+++.+ +.++++...++.|++++...+
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP----FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC----CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec----cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 56789999999988888777889999998644311110 01123456777766 456778888999999998654
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.02 E-value=0.0059 Score=38.21 Aligned_cols=58 Identities=7% Similarity=-0.064 Sum_probs=35.7
Q ss_pred CCeeEEEECCCCCEEEEEeCC---Cc--EEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEec
Q psy15190 17 GPVRDIQWEPSGQFIISVSED---QT--TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGA 80 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d---~~--~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~ 80 (117)
..+..++|+|+|+.++.++.+ +. +.+|++..+... +...... +..+.+++++ .++.++
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-----~l~~~~~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-----KILEAKN-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-----EEEEESE-EEEEEECTTSSEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-----EEEcCCC-ccceeECCCCCEEEEEE
Confidence 457789999999998887654 33 566676554311 1111223 7777888754 455554
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.94 E-value=0.0033 Score=43.61 Aligned_cols=74 Identities=9% Similarity=-0.100 Sum_probs=44.8
Q ss_pred eeEEEECCCCCEEEEEeCCCc----------------EEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecC
Q psy15190 19 VRDIQWEPSGQFIISVSEDQT----------------TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGAD 81 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~~----------------~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~ 81 (117)
+..+.|+|+|+.|+.++.+.. +.+|++.+....-....+...+...+..+.+++++ .++.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 567999999999998888766 88999865541000000000112234566777755 3443332
Q ss_pred -----CCeEEEeeCCh
Q psy15190 82 -----EKVVRAFRTTQ 92 (117)
Q Consensus 82 -----d~~i~iw~~~~ 92 (117)
+..+.+||+..
T Consensus 253 ~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CSSSSCCEEEEEEGGG
T ss_pred ccCCCccEEEEEECcc
Confidence 57899999854
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.94 E-value=0.018 Score=39.34 Aligned_cols=85 Identities=7% Similarity=-0.052 Sum_probs=54.5
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCC--CCceeeEecCcceEeccccEEEEEc----c
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPF--VGKNTWYEMARPQVHGYDLTCLALI----S 72 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~--~~~~~~~~~~~~~~~~~~i~~~~~~----~ 72 (117)
.++|. +....+.. ...+..+.++|+|++++.++.|+.+.+||+. +...... . ..+..-..++++ +
T Consensus 180 ~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~----i-~~G~~P~~ia~s~~~~p 253 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE----I-KIGSEARSIETSKMEGW 253 (567)
T ss_dssp EEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE----E-ECCSEEEEEEECCSTTC
T ss_pred EEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE----E-ecCCCCceeEEccccCC
Confidence 35565 33444432 2356789999999999999999999999995 4442111 1 123334566777 3
Q ss_pred -CcE-EEEecCCCeEEEeeCCh
Q psy15190 73 -TFV-FASGADEKVVRAFRTTQ 92 (117)
Q Consensus 73 -~~~-~~s~~~d~~i~iw~~~~ 92 (117)
+.. +++.-.++.+.++|...
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTT
T ss_pred CCCEEEEEEccCCeEEEEECCC
Confidence 334 44455579999999743
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.91 E-value=0.0034 Score=43.50 Aligned_cols=71 Identities=10% Similarity=-0.129 Sum_probs=42.5
Q ss_pred eEEEECCCCCEEEEEeCCCc-------------EEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCC--
Q psy15190 20 RDIQWEPSGQFIISVSEDQT-------------TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEK-- 83 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d~~-------------~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~-- 83 (117)
..++|+|+|+.++.++.|.. +++|++.+....-........+...+..+.+++++ .++.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999999988776 99999876541000000001122345667777755 344444333
Q ss_pred --eEEEeeC
Q psy15190 84 --VVRAFRT 90 (117)
Q Consensus 84 --~i~iw~~ 90 (117)
.+.+++.
T Consensus 251 ~~~l~~~~~ 259 (695)
T 2bkl_A 251 ENDVYWKRP 259 (695)
T ss_dssp EEEEEEECT
T ss_pred ceEEEEEcC
Confidence 5556654
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.90 E-value=0.013 Score=37.21 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=24.5
Q ss_pred CeeEEEECCCCCEEEEEeCC-----CcEEEecCCCCc
Q psy15190 18 PVRDIQWEPSGQFIISVSED-----QTTRLHAPFVGK 49 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d-----~~~~~wd~~~~~ 49 (117)
.+..+.|+|+|+.++.++.+ +.+.+||+..+.
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 47789999999987776544 348999987664
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.89 E-value=0.0018 Score=44.29 Aligned_cols=72 Identities=11% Similarity=-0.205 Sum_probs=48.8
Q ss_pred CCCCeeEEEECCCCCEEEEEeCC----------CcEEEecCCC------CceeeEecCcce-EeccccEEEEEccCc-EE
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSED----------QTTRLHAPFV------GKNTWYEMARPQ-VHGYDLTCLALISTF-VF 76 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d----------~~~~~wd~~~------~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~ 76 (117)
|...+..++|+|+|+.++.++.| ..+.+||+.. +.. . +.. .+...+..+++++++ .+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~---~l~~~~~~~~~~~~~SpDG~~l 202 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--R---ELSDDAHRFVTGPRLSPDGRQA 202 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS--E---ESSCSCSSEECCCEECTTSSEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce--e---EEEecCCCcccCceECCCCCEE
Confidence 55668899999999999998877 5788999876 331 1 111 122345566778855 46
Q ss_pred EEecCC--------CeEEEeeCC
Q psy15190 77 ASGADE--------KVVRAFRTT 91 (117)
Q Consensus 77 ~s~~~d--------~~i~iw~~~ 91 (117)
+.++.+ ..|.+||+.
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEEECCCCCCCCCCcEEEEEEEC
Confidence 555533 479999986
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.86 E-value=0.027 Score=34.71 Aligned_cols=84 Identities=7% Similarity=0.111 Sum_probs=54.1
Q ss_pred eeeec---ccCeEEcCCC-CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EE
Q psy15190 2 LVWAQ---QPCVTVGGHF-GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VF 76 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~-~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 76 (117)
.+||. +....+..+. ..++++.+.|+|+.++ +.++.+..||. +++..|..... ....+.+..+.+++ .+
T Consensus 18 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~---~~~~~~~~~~~~dG~~l 91 (276)
T 3no2_A 18 AIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP---AGCEMQTARILPDGNAL 91 (276)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC---TTCEEEEEEECTTSCEE
T ss_pred EEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC---CCccccccEECCCCCEE
Confidence 46666 5556666555 4688999999999888 34678999998 67766653210 11345566666644 55
Q ss_pred EEecC-CCeEEEeeCC
Q psy15190 77 ASGAD-EKVVRAFRTT 91 (117)
Q Consensus 77 ~s~~~-d~~i~iw~~~ 91 (117)
++.+. ++.+..++..
T Consensus 92 v~~~~~~~~v~~vd~~ 107 (276)
T 3no2_A 92 VAWCGHPSTILEVNMK 107 (276)
T ss_dssp EEEESTTEEEEEECTT
T ss_pred EEecCCCCEEEEEeCC
Confidence 55555 5666666653
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.85 E-value=0.021 Score=35.03 Aligned_cols=41 Identities=7% Similarity=-0.122 Sum_probs=33.0
Q ss_pred CeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 9 CVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 9 ~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
...+..+...+..+.++++|+++++...++.+.+||..++.
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 44555667778999999999988887777899999986665
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.67 E-value=0.051 Score=34.07 Aligned_cols=75 Identities=12% Similarity=0.016 Sum_probs=51.6
Q ss_pred CCCCeeEEEECCCCCEEEEEeCC------------------------CcEEEecCCCCceeeEecCcceEeccccEEEEE
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSED------------------------QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLAL 70 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d------------------------~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~ 70 (117)
..+.+..++++|+|+.+++.+.+ +++.+||..++........ ..-.....+++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK---NLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT---TTCSSEEEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC---CccCCceEEEE
Confidence 34678999999999999888877 4688999876652211100 01123456677
Q ss_pred cc-CcEEEEecCCCeEEEeeCCh
Q psy15190 71 IS-TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 71 ~~-~~~~~s~~~d~~i~iw~~~~ 92 (117)
.+ +.++++...++.|+.|+...
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g 121 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHS 121 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTC
T ss_pred CCCCCEEEEECCCCEEEEEeCCC
Confidence 66 44677788899999999854
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.46 E-value=0.0083 Score=37.52 Aligned_cols=69 Identities=9% Similarity=-0.069 Sum_probs=47.2
Q ss_pred CCCCCeeE-EEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeE-EEeeCC
Q psy15190 14 GHFGPVRD-IQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVV-RAFRTT 91 (117)
Q Consensus 14 ~h~~~v~~-i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i-~iw~~~ 91 (117)
++...+.. +.|+ ++ .+++++.++..++| +..+.. . ........+..+++++ ..+++++.++.. ++|.+.
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~--~---~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI--K---PIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE--E---EEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce--E---EEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 45566775 8999 88 88999999999999 863321 1 1111245567778888 777777766654 777764
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.44 E-value=0.05 Score=34.19 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=52.8
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEec-CcceEeccccEEEEEccCcEEE
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEM-ARPQVHGYDLTCLALISTFVFA 77 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~ 77 (117)
.+||. +....+. .......+.++++++.+++...++.+.++|..+........ ............+++..+.+++
T Consensus 67 ~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv 145 (328)
T 3dsm_A 67 FAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYV 145 (328)
T ss_dssp EEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEE
T ss_pred EEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEE
Confidence 45666 4444453 34567889998988666665578999999998776322211 1000000023344443344455
Q ss_pred Eec-CCCeEEEeeCChh
Q psy15190 78 SGA-DEKVVRAFRTTQN 93 (117)
Q Consensus 78 s~~-~d~~i~iw~~~~~ 93 (117)
+.. .++.|.++|+...
T Consensus 146 ~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETD 162 (328)
T ss_dssp EECTTCCEEEEEETTTT
T ss_pred EcCCCCCEEEEEECCCC
Confidence 544 4889999998653
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.44 E-value=0.049 Score=33.86 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=40.5
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCC----CcEEEecCCCCceeeEecCcceEeccccEEEEEccCcE-EEEe
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSED----QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFV-FASG 79 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d----~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~ 79 (117)
.+...+..+.++++|+++++...+ +.+.+||......... ... ......+..+.+.+++. +++.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI-IED-LSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE-ECS-SSSCCCEEEEEECTTSCEEEEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE-Ecc-CccCCcccceEECCCCCEEEEe
Confidence 456779999999999988887766 6889999875542110 000 01234566777776554 4443
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.33 E-value=0.0094 Score=41.65 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=45.0
Q ss_pred CCeeEEEECCCCCEEEEEeCC-----CcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCC--------
Q psy15190 17 GPVRDIQWEPSGQFIISVSED-----QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEK-------- 83 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d-----~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~-------- 83 (117)
..+..++|+|+|+.++.++.+ ..+++||+..+...-. ......+..++++++..++.+..|+
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-----~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-----ELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-----EEEEEESCCCEESTTSEEEEEECCCC-------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-----cCCCceeccEEEECCCEEEEEEecCcccccccc
Confidence 357789999999998876554 3599999987752110 1112223456676665555555544
Q ss_pred ------eEEEeeCCh
Q psy15190 84 ------VVRAFRTTQ 92 (117)
Q Consensus 84 ------~i~iw~~~~ 92 (117)
.|.+|++..
T Consensus 238 ~~~~~~~v~~~~lgt 252 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGT 252 (741)
T ss_dssp -CCCCCEEEEEETTS
T ss_pred cCCCCCEEEEEECCC
Confidence 388888754
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.24 E-value=0.092 Score=32.19 Aligned_cols=71 Identities=10% Similarity=0.162 Sum_probs=49.1
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--EEEEecCCCeEEEeeCC
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--VFASGADEKVVRAFRTT 91 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~i~iw~~~ 91 (117)
.....++++++|+.+++...++.+.+||..++..... ...+...+.++++.+++ ++++...++.|..+++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~----~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR----IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE----EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE----EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 4577899999999888887888999999864441111 11223456777776643 45666667899999875
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.16 E-value=0.071 Score=32.82 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=48.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCC
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTT 91 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~ 91 (117)
....+++.++|.++++...++.+..||.. ++..|.-.. ......+...+ +..++++..++.+..+|..
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~-----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL-----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC-----SSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC-----CCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 34556778899999999999999999997 776665322 12233445454 5567777778889888886
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.11 E-value=0.0067 Score=38.46 Aligned_cols=71 Identities=7% Similarity=-0.053 Sum_probs=43.4
Q ss_pred eeEEEECCCCCEEEEEeCC-C--cEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCCeEEEeeCChh
Q psy15190 19 VRDIQWEPSGQFIISVSED-Q--TTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d-~--~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~i~iw~~~~~ 93 (117)
+..++|+|+|+.++..+.+ + .+.+||...+... .... ..........++++ ..++.++.++.+.+|++..+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~--~l~~--~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV--QLTE--GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE--ECCC--SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE--Eeec--CCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 6778999999998776543 3 5677787655411 1100 01111222456664 46777788889999998643
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.10 E-value=0.11 Score=31.82 Aligned_cols=79 Identities=10% Similarity=-0.100 Sum_probs=50.0
Q ss_pred cCCCCCeeEEEECCCCCEEEE-------EeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCCe
Q psy15190 13 GGHFGPVRDIQWEPSGQFIIS-------VSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEKV 84 (117)
Q Consensus 13 ~~h~~~v~~i~~~~~~~~~~s-------~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~ 84 (117)
.........+.|++++..+++ ...++.+.+||...+....-.......+...+..+++.++ +.+..++.+..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~ 93 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG 93 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCC
Confidence 344455678999999988888 6778899999986665211111000012345667777776 66555544557
Q ss_pred EEEeeCC
Q psy15190 85 VRAFRTT 91 (117)
Q Consensus 85 i~iw~~~ 91 (117)
|..||..
T Consensus 94 l~~~d~~ 100 (314)
T 1pjx_A 94 LLVVQTD 100 (314)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 8888875
No 197
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.01 E-value=0.021 Score=39.70 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=43.6
Q ss_pred CCCCeeEEEECCCCCEEEE-----EeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCC------
Q psy15190 15 HFGPVRDIQWEPSGQFIIS-----VSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEK------ 83 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s-----~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~------ 83 (117)
|...+..++|+|+|++++- +++...+++||+.++..... .........++++.+..++.+..+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-----PLKDVKFSGISWLGNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----EEEEEESCCCEEETTTEEEEEESSCCC----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----ccCCceeccEEEeCCCEEEEEEecCcccccc
Confidence 5556788999999998773 34446799999987761111 0111112334455434455555543
Q ss_pred -------eEEEeeCCh
Q psy15190 84 -------VVRAFRTTQ 92 (117)
Q Consensus 84 -------~i~iw~~~~ 92 (117)
.|.+|++..
T Consensus 202 ~~~~~~~~v~~~~lgt 217 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGT 217 (693)
T ss_dssp ---CCCCEEEEEETTS
T ss_pred cccCCCcEEEEEECCC
Confidence 488888854
No 198
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.94 E-value=0.017 Score=37.14 Aligned_cols=60 Identities=7% Similarity=0.083 Sum_probs=39.0
Q ss_pred CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc-CcEEEEecCCCeEEEeeCCh
Q psy15190 27 SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS-TFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 27 ~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~ 92 (117)
++..+++++.|+.+..||..+++..|.... ..+.+..... +..+++++.|+.+..||...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC------CCSCCCC-----CCEEECTTTCCEEEC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC------CCceecceEcCCCEEEEeCCCCEEEEEECCC
Confidence 577889999999999999999887776321 2222222223 33677778999999999853
No 199
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.88 E-value=0.0055 Score=39.39 Aligned_cols=66 Identities=8% Similarity=0.048 Sum_probs=36.7
Q ss_pred EEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc----CcEEEEecCCCeEEEeeCChh
Q psy15190 22 IQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS----TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 22 i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~s~~~d~~i~iw~~~~~ 93 (117)
..++|++..++.++.|+.+..||..+++..|... ... ........ ++.++.++.|+.+..||...+
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~----~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT----YFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEE----EEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEe----ccc--ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 3456678888899999999999998887545421 010 01111111 145667788999999998643
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.79 E-value=0.12 Score=32.47 Aligned_cols=70 Identities=6% Similarity=0.000 Sum_probs=46.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--CcEEEEe----cCCCeEEEeeCC
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TFVFASG----ADEKVVRAFRTT 91 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~----~~d~~i~iw~~~ 91 (117)
....++++|+++.++.+.. .+.++|..++..... ............+++.+ +.++++. ..++.|.+||..
T Consensus 226 ~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~--~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR--PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS--CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CceeEEEecCCCEEEEEcc--EEEEEECCCCceeee--eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 5788999999888877654 888999876652100 00001123456677765 4456666 678899999986
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.75 E-value=0.092 Score=31.49 Aligned_cols=72 Identities=7% Similarity=0.027 Sum_probs=48.9
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCCeEEEeeCCh
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~i~iw~~~~ 92 (117)
..+..+.++++|+.+++...++.+.+||........... ........+++.++ .++++...++.|.+|+...
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~----~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF----TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC----SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc----cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 356789999999988887778899999986543111100 11134566777664 4666667788999999854
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.04 E-value=0.38 Score=31.02 Aligned_cols=89 Identities=15% Similarity=-0.080 Sum_probs=50.1
Q ss_pred eeeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEe----------CCCcEEEecCCCCceeeE-ecC--cceEecccc
Q psy15190 2 LVWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVS----------EDQTTRLHAPFVGKNTWY-EMA--RPQVHGYDL 65 (117)
Q Consensus 2 ~~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~----------~d~~~~~wd~~~~~~~~~-~~~--~~~~~~~~i 65 (117)
.++|. +....+..-..+ .+.++|+|+.++.+. .++++.++|..+.+.... +.. .....+..-
T Consensus 50 ~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 45555 334444333333 899999999988875 367899999976652111 010 000011122
Q ss_pred EEEEEccCc-EEEEec-C-CCeEEEeeCChh
Q psy15190 66 TCLALISTF-VFASGA-D-EKVVRAFRTTQN 93 (117)
Q Consensus 66 ~~~~~~~~~-~~~s~~-~-d~~i~iw~~~~~ 93 (117)
..+.+++++ .++.+. . ++.|.++| ...
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 356677644 444444 2 57899999 754
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.89 E-value=0.054 Score=37.88 Aligned_cols=72 Identities=10% Similarity=-0.034 Sum_probs=40.6
Q ss_pred eEEEECCCCCEEEEEeCCCc--------------EEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecC---
Q psy15190 20 RDIQWEPSGQFIISVSEDQT--------------TRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGAD--- 81 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d~~--------------~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~--- 81 (117)
..+.|+|+ +.++.++.|.. +.+|++.+....-........+...+..+.+++++ .++..+.
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57889999 88888776654 77888754430000000000111235566778865 3444433
Q ss_pred --CCeEEEeeCCh
Q psy15190 82 --EKVVRAFRTTQ 92 (117)
Q Consensus 82 --d~~i~iw~~~~ 92 (117)
...+.+||+..
T Consensus 291 ~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 291 DPVNTVHVARVTN 303 (741)
T ss_dssp CSCCEEEEEEEET
T ss_pred CCcceEEEEECCC
Confidence 34889998854
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.83 E-value=0.17 Score=33.11 Aligned_cols=85 Identities=14% Similarity=0.026 Sum_probs=48.6
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEe----------CCCcEEEecCCCCceeeEe-cC--cceEeccccEEEEEccC
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVS----------EDQTTRLHAPFVGKNTWYE-MA--RPQVHGYDLTCLALIST 73 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~----------~d~~~~~wd~~~~~~~~~~-~~--~~~~~~~~i~~~~~~~~ 73 (117)
+....+..-..+ . +.++|+|+.++.++ .++.+.+||..+....... .. .....+..-..+.++++
T Consensus 70 ~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 70 RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC
Confidence 334444433334 4 99999999887765 3678999999877622210 00 00001122344666664
Q ss_pred c-EEEEec--CCCeEEEeeCChh
Q psy15190 74 F-VFASGA--DEKVVRAFRTTQN 93 (117)
Q Consensus 74 ~-~~~s~~--~d~~i~iw~~~~~ 93 (117)
+ .++.+. .++.+.++|....
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTT
T ss_pred CCEEEEEEcCCCCeEEEEECCCC
Confidence 4 344333 3789999998654
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.41 E-value=0.15 Score=34.86 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=44.4
Q ss_pred CCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 25 EPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 25 ~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
+|.+..+++...++++.++|..+++..... ..+.....+.+++++ .+++++.|+.|.+||+.
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i-----~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVL-----DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEE-----ECSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEE-----eCCCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 355667788888999999999877632221 123445677888855 56777889999999984
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.35 E-value=0.19 Score=35.14 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=35.2
Q ss_pred CCcEEEecCCCCceeeEecCcceEeccccE-EEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 37 DQTTRLHAPFVGKNTWYEMARPQVHGYDLT-CLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 37 d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++++..||+.+++..|+... ..... ......+++++.++.|+.++.||.+.+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY-----VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE-----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ceeEEEEECCCCCeEeEccC-----CCCccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 36788999998887776321 11111 112234678888999999999998754
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.94 E-value=0.62 Score=28.63 Aligned_cols=71 Identities=10% Similarity=0.047 Sum_probs=46.8
Q ss_pred CCCCeeEEEECC-CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 15 HFGPVRDIQWEP-SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 15 h~~~v~~i~~~~-~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
.....-...|++ ++.++++...++.+..||...+..... .....+.++++.+++.++.+. +..|.+||...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~------~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV------TMDAPVSSVALRQSGGYVATI-GTKFCALNWKE 82 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE------ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE------eCCCceEEEEECCCCCEEEEE-CCeEEEEECCC
Confidence 334456789999 456677777788999999876542111 134567788887755444444 56888898854
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.74 E-value=0.17 Score=32.75 Aligned_cols=88 Identities=9% Similarity=-0.119 Sum_probs=49.9
Q ss_pred eeec---ccCeEEcCCCCCeeEEEECCCCCEEEEEe----------CCCcEEEecCCCCceeeEe-cC--cceEeccccE
Q psy15190 3 VWAQ---QPCVTVGGHFGPVRDIQWEPSGQFIISVS----------EDQTTRLHAPFVGKNTWYE-MA--RPQVHGYDLT 66 (117)
Q Consensus 3 ~w~~---~~~~~~~~h~~~v~~i~~~~~~~~~~s~~----------~d~~~~~wd~~~~~~~~~~-~~--~~~~~~~~i~ 66 (117)
+.|. +.+.++..-..+ .+.++|+++.++.+. .++++.+||..+.+..... .. .....+.+-.
T Consensus 50 vID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~ 127 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH 127 (368)
T ss_dssp EEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred EEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc
Confidence 4555 444555443444 699999999888775 3678999999887622210 00 0000012334
Q ss_pred EEEEccCc-EEEEec--CCCeEEE--eeCCh
Q psy15190 67 CLALISTF-VFASGA--DEKVVRA--FRTTQ 92 (117)
Q Consensus 67 ~~~~~~~~-~~~s~~--~d~~i~i--w~~~~ 92 (117)
.+.+++++ .++.+. .+..+.+ +|...
T Consensus 128 ~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred eEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 56666644 344433 2456777 87743
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.61 E-value=0.2 Score=32.64 Aligned_cols=71 Identities=11% Similarity=-0.045 Sum_probs=43.4
Q ss_pred EEECCCCCEEEEEeCCC--cEEEecCCCCceeeEecCcceE-eccccEEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 22 IQWEPSGQFIISVSEDQ--TTRLHAPFVGKNTWYEMARPQV-HGYDLTCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 22 i~~~~~~~~~~s~~~d~--~~~~wd~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++|+++++.++.+..++ .+.+++...... ......... .......+++.+ ++.++.+..++.|..||....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC
Confidence 88999999888888766 566666643321 000000000 223445677777 566666667889999998643
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=93.58 E-value=0.95 Score=29.60 Aligned_cols=68 Identities=6% Similarity=-0.105 Sum_probs=42.3
Q ss_pred eeEEEECCCCCEEEEEeC--CCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 19 VRDIQWEPSGQFIISVSE--DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~--d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
...+.++|+|++++.+.. ++++-++|..+.+..... ...+. .-+.......+++.+.||++-+.++..
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI----~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML----DVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE----ECCSE--EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE----ECCCc--ceeecCCCceeEEECCCCCEEEEECCC
Confidence 456889999998887763 678999999887622221 01110 111122234566777788888887754
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=93.30 E-value=0.92 Score=28.56 Aligned_cols=79 Identities=13% Similarity=0.016 Sum_probs=48.7
Q ss_pred CCCCCeeEEEECCCCCEEEEEeC-----CCcEEEecCCCCce--eeEecCcceEeccccEEEEEcc-Cc-EEEEec---C
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSE-----DQTTRLHAPFVGKN--TWYEMARPQVHGYDLTCLALIS-TF-VFASGA---D 81 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~-----d~~~~~wd~~~~~~--~~~~~~~~~~~~~~i~~~~~~~-~~-~~~s~~---~ 81 (117)
++...+..+.++++++++++-.. +..+.+||..+++. .+.............+.+++.+ ++ .+++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 35567899999999887665433 57899999876651 1111111111123346677664 33 456655 6
Q ss_pred CCeEEEeeCCh
Q psy15190 82 EKVVRAFRTTQ 92 (117)
Q Consensus 82 d~~i~iw~~~~ 92 (117)
++.|.+||+..
T Consensus 144 ~~~i~v~d~~~ 154 (343)
T 2qe8_A 144 KAALIRVDLQT 154 (343)
T ss_dssp GCEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 78999999864
No 212
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.25 E-value=0.33 Score=33.92 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=34.3
Q ss_pred CcEEEecCCCCceeeEecCcceEeccccEEEE-EccCcEEEEecCCCeEEEeeCChh
Q psy15190 38 QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLA-LISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 38 ~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+.+..||..+++..|... +........ ...+++++.++.|+.+++||...+
T Consensus 457 g~l~A~D~~tG~~~W~~~-----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cEEEEEeCCCCcEEeecC-----CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 678899998888777632 222222222 234567788899999999998754
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.68 E-value=1 Score=27.69 Aligned_cols=61 Identities=10% Similarity=0.052 Sum_probs=39.2
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEc-cC--cEEEEecC
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALI-ST--FVFASGAD 81 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~--~~~~s~~~ 81 (117)
.....++++++|+..++...++.+.+||..+++.... .......+.++++. ++ .++++...
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~----i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT----VKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE----EECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE----EECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 4567889999998888877788899999876652111 11233456777775 32 24555543
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.24 E-value=1.3 Score=27.66 Aligned_cols=67 Identities=15% Similarity=0.004 Sum_probs=44.0
Q ss_pred eeEEEECCC-CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 19 VRDIQWEPS-GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 19 v~~i~~~~~-~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
.....|+|+ +..+++...++.+..||...+..... .....+.++.+.+++.++.++.+ .|.+||...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~------~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVH------ALPFMGSALAKISDSKQLIASDD-GLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE------ECSSCEEEEEEEETTEEEEEETT-EEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE------ECCCcceEEEEeCCCeEEEEECC-CEEEEECCC
Confidence 467899996 55667777788899999876542111 12345777887776665555544 488888754
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.56 E-value=1.5 Score=26.96 Aligned_cols=36 Identities=0% Similarity=-0.146 Sum_probs=26.9
Q ss_pred EEcCCCCCeeEEEECCCCCEEEEEeCCCcEEEecCC
Q psy15190 11 TVGGHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPF 46 (117)
Q Consensus 11 ~~~~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~ 46 (117)
.+..+...+..+.++++|+++++...++.+.+|+..
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 334455668899999999977665556788889875
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=91.54 E-value=0.83 Score=30.26 Aligned_cols=84 Identities=13% Similarity=-0.021 Sum_probs=46.0
Q ss_pred ccCeEEcCCCCCeeEEEECCCCCEEEEEe----------CCCcEEEecCCCCceeeEe-cC--cceEeccccEEEEEccC
Q psy15190 7 QPCVTVGGHFGPVRDIQWEPSGQFIISVS----------EDQTTRLHAPFVGKNTWYE-MA--RPQVHGYDLTCLALIST 73 (117)
Q Consensus 7 ~~~~~~~~h~~~v~~i~~~~~~~~~~s~~----------~d~~~~~wd~~~~~~~~~~-~~--~~~~~~~~i~~~~~~~~ 73 (117)
+....+..-..+ .+.++|+++.++.+. .++.+.++|..+.+..... .. .....+..-..+.++++
T Consensus 110 ~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spD 187 (426)
T 3c75_H 110 RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPD 187 (426)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTT
T ss_pred EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCC
Confidence 344444433344 799999999877765 3668999999877622110 00 00000112233455553
Q ss_pred c-EEEEec--CCCeEEEeeCCh
Q psy15190 74 F-VFASGA--DEKVVRAFRTTQ 92 (117)
Q Consensus 74 ~-~~~s~~--~d~~i~iw~~~~ 92 (117)
+ .++.+. .++.+.+.|...
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTT
T ss_pred CCEEEEEecCCCCeEEEEECCC
Confidence 3 343333 257888888864
No 217
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.32 E-value=1.5 Score=26.39 Aligned_cols=72 Identities=3% Similarity=-0.093 Sum_probs=44.1
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCce-eeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKN-TWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
+...+..+.++++|+.+++...++.+..||. .+.. .+. . ......+.++.+ +++.+..+...+.+..+++.+
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~-~---~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP-I---QIKSAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE-C---SSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEe-C---CCCCCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 4456889999999997777767788999998 3331 111 0 012244566677 655444443356676677654
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.24 E-value=1.5 Score=26.34 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=49.6
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 14 GHFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 14 ~h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
.+...+.++.++++|+.+++...++.+.+||.. +........ .....+..+++.+++ ++++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLP---TPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECS---STTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCC---cccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 455679999999999988877768889999987 432111110 112445667766644 55555557889888875
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=91.18 E-value=2 Score=27.65 Aligned_cols=64 Identities=9% Similarity=-0.038 Sum_probs=39.6
Q ss_pred eeEEEECCCCCEEEEEeC--CCcEEEecCCCCceeeEecCcceEeccccEEEEEcc--CcEEEEecCCCeEEEeeC
Q psy15190 19 VRDIQWEPSGQFIISVSE--DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIS--TFVFASGADEKVVRAFRT 90 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~--d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~s~~~d~~i~iw~~ 90 (117)
...+.|+|+|++++.+.. +..+-++| .+++....... .. .|+.+.+ ...+++.+.|+.+.+++.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~----~~---~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS----SP---TCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC----CC---ceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 447899999999988764 47799999 77652111010 00 1222222 335666777888887777
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.11 E-value=1.7 Score=26.72 Aligned_cols=74 Identities=7% Similarity=-0.095 Sum_probs=47.1
Q ss_pred EEcCCCCCeeEEEECCCCC-EEEEEeCCCcEEEecCCCCc-eeeEecCcceEeccccEEEEEccCcE-EEEecCCCeEEE
Q psy15190 11 TVGGHFGPVRDIQWEPSGQ-FIISVSEDQTTRLHAPFVGK-NTWYEMARPQVHGYDLTCLALISTFV-FASGADEKVVRA 87 (117)
Q Consensus 11 ~~~~h~~~v~~i~~~~~~~-~~~s~~~d~~~~~wd~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~s~~~d~~i~i 87 (117)
.+...........|+|+++ ++++...++.+..|+. .+. ..+. .....+..+.+.+++. +++...++.|..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~------~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLL------DATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEE------ESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEe------CCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3444555667899999988 6677777888999987 343 1111 2234456677776554 444444578888
Q ss_pred eeCC
Q psy15190 88 FRTT 91 (117)
Q Consensus 88 w~~~ 91 (117)
++..
T Consensus 112 ~~~~ 115 (305)
T 3dr2_A 112 SDAD 115 (305)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8864
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.35 E-value=1.3 Score=30.96 Aligned_cols=72 Identities=11% Similarity=-0.009 Sum_probs=39.9
Q ss_pred eEEEECCCCCEEEEEeCCCc-------------EEEecCCCCceeeEecCcceE-eccccEEEEEccCcE--EEEec---
Q psy15190 20 RDIQWEPSGQFIISVSEDQT-------------TRLHAPFVGKNTWYEMARPQV-HGYDLTCLALISTFV--FASGA--- 80 (117)
Q Consensus 20 ~~i~~~~~~~~~~s~~~d~~-------------~~~wd~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~--~~s~~--- 80 (117)
..+.|+ +++.|+.++.+.. +.+|++.+....-...-+... +......+.+++++. +++..
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 9999888887743 788887654310000000001 111234566777552 33332
Q ss_pred CCCeEEEeeCCh
Q psy15190 81 DEKVVRAFRTTQ 92 (117)
Q Consensus 81 ~d~~i~iw~~~~ 92 (117)
.++.+.++|+..
T Consensus 257 ~~~~i~~~d~~~ 268 (693)
T 3iuj_A 257 SGNRLYVKDLSQ 268 (693)
T ss_dssp SCCEEEEEETTS
T ss_pred CCcEEEEEECCC
Confidence 235889999754
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.84 E-value=2.8 Score=27.26 Aligned_cols=70 Identities=14% Similarity=-0.100 Sum_probs=44.4
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCC--eEEEeeCCh
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEK--VVRAFRTTQ 92 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~--~i~iw~~~~ 92 (117)
.....++|+++++++++...++.+++||...+....-. ....... +++.+++ .++.+..++ .|..++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-----~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-----PGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-----ETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-----ccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 45778999999998888777889999999765421110 0111222 6666643 556665544 777777643
No 223
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=89.26 E-value=0.81 Score=30.58 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=45.1
Q ss_pred CCCeeEEEECC---CCCEEEEEeCCCcEEEecCCCCc--eeeEecCcceEec-----cccEEEEEccCcE---EEEecCC
Q psy15190 16 FGPVRDIQWEP---SGQFIISVSEDQTTRLHAPFVGK--NTWYEMARPQVHG-----YDLTCLALISTFV---FASGADE 82 (117)
Q Consensus 16 ~~~v~~i~~~~---~~~~~~s~~~d~~~~~wd~~~~~--~~~~~~~~~~~~~-----~~i~~~~~~~~~~---~~s~~~d 82 (117)
...|..+.|+| ++..++.--.|+++|+||+.... .. .........+ .++.+++|..+++ +++...+
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~ 202 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEG 202 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTS
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCC
Confidence 56799999999 56689999999999999997522 11 0000001112 5667777766552 3334566
Q ss_pred CeEEEe
Q psy15190 83 KVVRAF 88 (117)
Q Consensus 83 ~~i~iw 88 (117)
|-|...
T Consensus 203 GDIYAl 208 (452)
T 3pbp_A 203 GDIFAF 208 (452)
T ss_dssp CEEEEE
T ss_pred CCEEEE
Confidence 777543
No 224
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=88.97 E-value=3.8 Score=27.51 Aligned_cols=75 Identities=7% Similarity=0.010 Sum_probs=48.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCc---e-----------eeEecCcceEeccccEEEEEcc----CcEEEEe
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK---N-----------TWYEMARPQVHGYDLTCLALIS----TFVFASG 79 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~---~-----------~~~~~~~~~~~~~~i~~~~~~~----~~~~~s~ 79 (117)
.+..+..+|+|++++..+ +.++.+-.++.+. . .++...........|..+.|.| +..+++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999998875 4478887776322 0 1111000000124566777766 4478888
Q ss_pred cCCCeEEEeeCChh
Q psy15190 80 ADEKVVRAFRTTQN 93 (117)
Q Consensus 80 ~~d~~i~iw~~~~~ 93 (117)
..|++||+||+...
T Consensus 146 tsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 146 KEDDTITMFDILNS 159 (452)
T ss_dssp ETTSCEEEEETTCT
T ss_pred ecCCEEEEEEcccC
Confidence 99999999999754
No 225
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=88.64 E-value=4.6 Score=28.02 Aligned_cols=71 Identities=17% Similarity=0.210 Sum_probs=44.7
Q ss_pred eeEEEECCCCCEEEEEeC-CCcEEEecCCCCceeeEecCcceEeccccEEEEEc-cCcEEEEec-CC-----CeEEEeeC
Q psy15190 19 VRDIQWEPSGQFIISVSE-DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALI-STFVFASGA-DE-----KVVRAFRT 90 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~-d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~s~~-~d-----~~i~iw~~ 90 (117)
...+.+.++++.++.++. +..+.+||..+. .|.+..... ....-.+.... .+.+++.|+ .+ ..+.+||+
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~-~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCC-ccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 345677788999988874 457889998655 355443211 11222344455 566788887 34 56888998
Q ss_pred Ch
Q psy15190 91 TQ 92 (117)
Q Consensus 91 ~~ 92 (117)
..
T Consensus 322 ~t 323 (656)
T 1k3i_A 322 SS 323 (656)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=88.40 E-value=3.6 Score=26.60 Aligned_cols=66 Identities=11% Similarity=0.066 Sum_probs=42.7
Q ss_pred EEECCCCCEEEEEeC---------CCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--EEEEec-CCCeEEEee
Q psy15190 22 IQWEPSGQFIISVSE---------DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--VFASGA-DEKVVRAFR 89 (117)
Q Consensus 22 i~~~~~~~~~~s~~~---------d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~-~d~~i~iw~ 89 (117)
+.++|+++.++.+.. +..+.++|..+.+ ...+.. .+.....+.+.+++ ++++.. .++.+.++|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~----vv~~i~-vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ----TSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC----EEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe----EEEEEE-CCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 678998887765432 2345599998776 222221 22345677777754 566666 599999999
Q ss_pred CCh
Q psy15190 90 TTQ 92 (117)
Q Consensus 90 ~~~ 92 (117)
...
T Consensus 344 ~~t 346 (368)
T 1mda_H 344 AAS 346 (368)
T ss_dssp SSS
T ss_pred CCC
Confidence 965
No 227
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.86 E-value=3 Score=28.67 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=34.4
Q ss_pred CCcEEEecCCCCceeeEecCcceEeccccEE-EEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 37 DQTTRLHAPFVGKNTWYEMARPQVHGYDLTC-LALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 37 d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++.+..||..+++..|.... ...... .....+++++.++.|+.++.+|.+.+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----SSCCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEECCCCCEEEEecC-----CCCCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 57788999988887776321 111111 11224667778999999999998654
No 228
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.21 E-value=6.3 Score=28.95 Aligned_cols=32 Identities=6% Similarity=0.086 Sum_probs=27.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
.+.++...++..++++-+.|+++|+|++.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 46677777788899999999999999998886
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=85.20 E-value=5.2 Score=25.11 Aligned_cols=77 Identities=9% Similarity=-0.007 Sum_probs=44.9
Q ss_pred CCeeEEEECCCCCEEEEEe--CCCcEEEecCCCCcee-eEec-CcceEeccccEEEEEccCcEEEEec-C-----CCeEE
Q psy15190 17 GPVRDIQWEPSGQFIISVS--EDQTTRLHAPFVGKNT-WYEM-ARPQVHGYDLTCLALISTFVFASGA-D-----EKVVR 86 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~--~d~~~~~wd~~~~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~~s~~-~-----d~~i~ 86 (117)
.....+.++++|+.+++.. .++..++|.+..+... +... .....+-..+..+++.+.+.+.... . +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 5788999999999998864 2343566665433311 1000 0111223456777787756544332 2 57899
Q ss_pred EeeCChh
Q psy15190 87 AFRTTQN 93 (117)
Q Consensus 87 iw~~~~~ 93 (117)
+||+..+
T Consensus 97 ~~d~~tg 103 (343)
T 2qe8_A 97 AWDTLNN 103 (343)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9998643
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.18 E-value=5.9 Score=24.97 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=40.3
Q ss_pred CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEe-----ccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 27 SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVH-----GYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 27 ~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
.+..++.++.++.+..+|..+++..|......... ...+...-...++.++.++.++.+..+|...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCC
Confidence 35567777888899999998888666532211000 1122222223456677777888888888754
No 231
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=83.99 E-value=5.6 Score=27.28 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=33.2
Q ss_pred CCcEEEecCCCCceeeEecCcceEeccccEEEE-EccCcEEEEecCCCeEEEeeCChh
Q psy15190 37 DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLA-LISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 37 d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++.+..||..+++..|... ....+.... ...+++++.++.|+.++.+|.+.+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~-----~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKW-----EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CEEEEEECTTTCCEEEEEE-----ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCeEEEEECCCCCEEEEec-----CCCCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 4678889988887666522 111111111 223567777899999999998654
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.23 E-value=2.6 Score=26.62 Aligned_cols=58 Identities=5% Similarity=-0.075 Sum_probs=36.4
Q ss_pred CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEee
Q psy15190 28 GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFR 89 (117)
Q Consensus 28 ~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~ 89 (117)
+..++.++.++.+.++|..+++..|.... ....+.......++.++.++.+|.+..++
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~----~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV----DSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC----CTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec----CCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 45677788888999999888775554211 11222211122356778888899998876
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=82.12 E-value=2.6 Score=29.59 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=25.3
Q ss_pred EECCCCCEEEEEeCCCcEEEecCCCCceeeE
Q psy15190 23 QWEPSGQFIISVSEDQTTRLHAPFVGKNTWY 53 (117)
Q Consensus 23 ~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~ 53 (117)
.+...+.+++.++.|+.++.||..+++..|.
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 3455677888899999999999999986665
No 234
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.06 E-value=8.9 Score=26.62 Aligned_cols=52 Identities=10% Similarity=0.105 Sum_probs=33.3
Q ss_pred CCcEEEecCCCCceeeEecCcceEeccccE-EEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 37 DQTTRLHAPFVGKNTWYEMARPQVHGYDLT-CLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 37 d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++.+..||+.+++..|.... ..... ......+++++.++.|+.++.+|.+.+
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME-----RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE-----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cCeEEEEECCCCCEEeEecC-----CCCccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 46788889888887776321 11111 111224567777899999999998654
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=81.42 E-value=7.3 Score=24.06 Aligned_cols=71 Identities=11% Similarity=0.060 Sum_probs=43.7
Q ss_pred eeEEEECCCCCEEEEEeC--CCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 19 VRDIQWEPSGQFIISVSE--DQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~--d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
...+.|++++.++++.+. ++.+++.|..+++........ ......-+....+.++++.-.++.+.++|...
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEETTEEEEEETTCSEEEEEETTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEeCCEEEEEEecCCEEEEEECCC
Confidence 578999998777776654 578999999888722221100 00111223344445566666788888888754
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=80.08 E-value=5 Score=27.98 Aligned_cols=75 Identities=8% Similarity=-0.086 Sum_probs=46.7
Q ss_pred CeeEEEECCCCCEEEEEe-CCCcEEEecCCCCce----eeEecCc---ceEeccccEEEEEccCcE-EEEecCCCeEEEe
Q psy15190 18 PVRDIQWEPSGQFIISVS-EDQTTRLHAPFVGKN----TWYEMAR---PQVHGYDLTCLALISTFV-FASGADEKVVRAF 88 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~-~d~~~~~wd~~~~~~----~~~~~~~---~~~~~~~i~~~~~~~~~~-~~s~~~d~~i~iw 88 (117)
...++.++|+|++++.++ .+.++-++|..+... ...+... ....+..-..+++.+++. +++.--|+.+..|
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kw 357 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKW 357 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEE
Confidence 456899999999876665 477899999975420 0000000 011223335566777555 4556669999999
Q ss_pred eCCh
Q psy15190 89 RTTQ 92 (117)
Q Consensus 89 ~~~~ 92 (117)
|+..
T Consensus 358 di~~ 361 (595)
T 1fwx_A 358 NIED 361 (595)
T ss_dssp EHHH
T ss_pred EhhH
Confidence 9854
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=79.07 E-value=9.1 Score=23.70 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=24.5
Q ss_pred eeEEEECCCCCEEEEEeCCC--cEEEecCCCCc
Q psy15190 19 VRDIQWEPSGQFIISVSEDQ--TTRLHAPFVGK 49 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~--~~~~wd~~~~~ 49 (117)
...+.|+ ++.++.|.+.++ .+++.|+.+++
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk 76 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK 76 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCc
Confidence 4678888 678888888876 89999998887
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=78.29 E-value=7.8 Score=23.64 Aligned_cols=56 Identities=14% Similarity=0.043 Sum_probs=26.3
Q ss_pred EEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCC
Q psy15190 31 IISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTT 91 (117)
Q Consensus 31 ~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~ 91 (117)
+..++.++.+..+|. ++...+... .....+.++....++.+..++.+|.+++....
T Consensus 268 l~v~t~~ggl~~~d~-~g~~~~~~~----~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DGTEKWNFE----TGSWIIATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp EEEECTTCEEEEECT-TSCEEEEEE----CSSCCCSCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred EEEecCCCCEEEECC-CCcEEEEEE----cCCccccceEEcCCCEEEEEcCCCeEEEEecc
Confidence 334455555666664 333222211 11122333344344556667777777776654
No 239
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=77.42 E-value=9.1 Score=22.83 Aligned_cols=73 Identities=10% Similarity=0.098 Sum_probs=48.4
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc-EEEEecCCCeEEEeeCC
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF-VFASGADEKVVRAFRTT 91 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~s~~~d~~i~iw~~~ 91 (117)
....+..+.++++|+.+++...++.+.++|.. +........ .....+..++..+++ ++++...++.|..+|..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVP---TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECC---CCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 44578899999999988887778899999987 442111111 112345666666544 55555557888888875
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=77.18 E-value=6.9 Score=23.89 Aligned_cols=66 Identities=11% Similarity=0.018 Sum_probs=34.2
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeC
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRT 90 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~ 90 (117)
..+..+...+++..++.. +.+..+| ..+...|.... ....+.++...+++.+..++.++.+..++.
T Consensus 177 ~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~----~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA----GYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC----SSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc----CCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 345556666667655444 6777788 45543343211 112244444444445555555666666654
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=77.07 E-value=11 Score=23.48 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=39.9
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeE-ecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCC
Q psy15190 19 VRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWY-EMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTT 91 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~ 91 (117)
...+.|+ ++.++.+.+.++.++++|..+++.... ...... ..-+....+.++.....++.+.++|..
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~F-----geGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIF-----AEGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCC-----EEEEEECSSCEEEEESSSCEEEEEETT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcc-----eeEEEEeCCEEEEEEccCCEEEEEECC
Confidence 4677777 477888999999999999988872221 111110 011333344455555556666666664
No 242
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=76.69 E-value=11 Score=23.41 Aligned_cols=69 Identities=10% Similarity=-0.029 Sum_probs=39.9
Q ss_pred CeeEEEECCCCCEEEEEeCC----CcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--EEEEecCCCeEEEeeCC
Q psy15190 18 PVRDIQWEPSGQFIISVSED----QTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--VFASGADEKVVRAFRTT 91 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d----~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~s~~~d~~i~iw~~~ 91 (117)
.+..+.++|+|+.+++...+ ....+|.+..+.. .. ........+.+++++++ ++++...++.|.+|++.
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~--~~---~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV--TK---LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE--EE---EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE--EE---eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 47899999999987765422 2344544433321 10 01111234566777654 35555667899999975
No 243
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=73.56 E-value=14 Score=23.10 Aligned_cols=70 Identities=9% Similarity=0.037 Sum_probs=41.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeC
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRT 90 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~ 90 (117)
.+..+.+.+++..++.+. ++.+.. ...+...|............+..+.+.++..++.++.+|.|.-++-
T Consensus 251 ~~~~v~~~~~~~~~~~g~-~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAGG-AGALLC--SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEEEESSSSCEEEEES-TTCEEE--ESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred ceEEEEecCCCEEEEEeC-CCeEEE--eCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 477888888777666654 555422 2222235554322111234567777766667777788888776653
No 244
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.40 E-value=3 Score=31.15 Aligned_cols=32 Identities=6% Similarity=0.086 Sum_probs=26.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 18 PVRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 18 ~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
.+.++...++..++++-+.|+++|+|++.++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 34555566778899999999999999998876
No 245
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=72.91 E-value=18 Score=24.02 Aligned_cols=31 Identities=3% Similarity=-0.178 Sum_probs=25.0
Q ss_pred eeEEEECCCCCEEEEEeC--CCcEEEecCCCCc
Q psy15190 19 VRDIQWEPSGQFIISVSE--DQTTRLHAPFVGK 49 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~--d~~~~~wd~~~~~ 49 (117)
...+.++|+|++++.+.. ++++-+.|..+.+
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 456789999999888764 5789999998776
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=72.32 E-value=9.4 Score=26.70 Aligned_cols=52 Identities=10% Similarity=0.072 Sum_probs=34.7
Q ss_pred CCcEEEecCCCCceeeEecCcceEeccccEE-EEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 37 DQTTRLHAPFVGKNTWYEMARPQVHGYDLTC-LALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 37 d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++.+..||..+++..|... ....... .-...+++++.++.|+.++.||.+.+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~-----~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVP-----YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp EEEEEEEETTTTEEEEEEE-----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEeCCCCcEEEEcc-----CCCCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 4778999999888777632 1111111 11234668888899999999998654
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=71.36 E-value=6.2 Score=27.67 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=25.6
Q ss_pred EEEECCCCCEEEEEeCCCcEEEecCCCCceeeE
Q psy15190 21 DIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWY 53 (117)
Q Consensus 21 ~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~ 53 (117)
...+...+..++.++.|+.+++||..+++..|.
T Consensus 481 ~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 334455677888889999999999999885554
No 248
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=70.97 E-value=21 Score=24.11 Aligned_cols=89 Identities=11% Similarity=0.013 Sum_probs=48.9
Q ss_pred Ceeeec---ccCeEEcCC--CCCeeEEEE--CCCCCEEEEEe------CCCcEEEecCCCCceeeEecCcc---------
Q psy15190 1 MLVWAQ---QPCVTVGGH--FGPVRDIQW--EPSGQFIISVS------EDQTTRLHAPFVGKNTWYEMARP--------- 58 (117)
Q Consensus 1 v~~w~~---~~~~~~~~h--~~~v~~i~~--~~~~~~~~s~~------~d~~~~~wd~~~~~~~~~~~~~~--------- 58 (117)
|.+||. +...++..- ......++| +|+++++..++ .++++-+|....+. |......
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~~vIdi~~~~v~~ 307 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK--WNAEKVIEIPAEPLEG 307 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--EEEEEEEEECCEECCS
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc--eeEEEEEeCCCccccc
Confidence 356777 334444332 134556767 99999877666 45577766654432 1111000
Q ss_pred ---------eEeccccEEEEEccCc--EEEEecCCCeEEEeeCC
Q psy15190 59 ---------QVHGYDLTCLALISTF--VFASGADEKVVRAFRTT 91 (117)
Q Consensus 59 ---------~~~~~~i~~~~~~~~~--~~~s~~~d~~i~iw~~~ 91 (117)
.........+..++++ ++++.-..+.|.++|+.
T Consensus 308 ~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 308 NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 0001234455666655 45555568899999984
No 249
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.50 E-value=27 Score=25.78 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=20.6
Q ss_pred EEEEEcc-CcEEEEecCCCeEEEeeCChh
Q psy15190 66 TCLALIS-TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 66 ~~~~~~~-~~~~~s~~~d~~i~iw~~~~~ 93 (117)
.++...+ ...+++-|.|+++|+|++.++
T Consensus 239 ~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 239 ISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred EEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 3444433 447889999999999998764
No 250
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=66.47 E-value=28 Score=24.16 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=39.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEecCCCCceeeEecCcceE-eccccEEEEEc-cCcEEEEecC-CCeE
Q psy15190 21 DIQWEP-SGQFIISVSEDQ-----------TTRLHAPFVGKNTWYEMARPQV-HGYDLTCLALI-STFVFASGAD-EKVV 85 (117)
Q Consensus 21 ~i~~~~-~~~~~~s~~~d~-----------~~~~wd~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~~~~s~~~-d~~i 85 (117)
..++.+ +++.++.++.+. .+.+||..+.. |........ +..-....++. .+.+++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 456666 788888876543 46788886654 322111100 11111223443 4667888874 5689
Q ss_pred EEeeCCh
Q psy15190 86 RAFRTTQ 92 (117)
Q Consensus 86 ~iw~~~~ 92 (117)
.+||+..
T Consensus 268 ~~yd~~t 274 (656)
T 1k3i_A 268 SLYDSSS 274 (656)
T ss_dssp EEEEGGG
T ss_pred EEecCcC
Confidence 9999854
No 251
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.64 E-value=13 Score=26.62 Aligned_cols=29 Identities=3% Similarity=0.094 Sum_probs=23.6
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEecCCCCc
Q psy15190 19 VRDIQWEPSGQFIISVSEDQTTRLHAPFVGK 49 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~ 49 (117)
|.++.+ +..++++-+.|+++|+|++.++.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 444433 57799999999999999999886
No 252
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=62.06 E-value=22 Score=21.08 Aligned_cols=72 Identities=7% Similarity=-0.051 Sum_probs=46.5
Q ss_pred CCCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccC-cEEEEecCCCeEEEeeCC
Q psy15190 16 FGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALIST-FVFASGADEKVVRAFRTT 91 (117)
Q Consensus 16 ~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~s~~~d~~i~iw~~~ 91 (117)
...+..+.+++++..+++...++.+..+|.. +........ ........++..++ .++++...++.+..++..
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLP---QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCC---CCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 3568889999999988877767889999886 442111110 01234566666654 456665557788888875
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=61.62 E-value=26 Score=21.69 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=34.3
Q ss_pred CCCCEEEEEeCCCcEEEecCCCCceeeEecCcc-eEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 26 PSGQFIISVSEDQTTRLHAPFVGKNTWYEMARP-QVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 26 ~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+++..++.+..+..+.++|..+.+..-...... ...-..++.+.+..+.+++....++.|.+.|+.++
T Consensus 134 ~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 134 HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTC
T ss_pred cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCC
Confidence 345555444445667777776655211111100 00012233445555555666666788888888654
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=55.75 E-value=34 Score=23.45 Aligned_cols=65 Identities=17% Similarity=0.145 Sum_probs=35.9
Q ss_pred CCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecC------CCeEEEeeCCh
Q psy15190 28 GQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGAD------EKVVRAFRTTQ 92 (117)
Q Consensus 28 ~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~------d~~i~iw~~~~ 92 (117)
+..++.++.|+.+..+|..+++..|............+.+.-...++.++.++. ++.+..+|...
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t 185 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT 185 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC
Confidence 456677788899999999888877763211000000111100112345444443 68888888754
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=52.64 E-value=37 Score=20.70 Aligned_cols=68 Identities=7% Similarity=-0.076 Sum_probs=36.1
Q ss_pred CCCCEEEEEeCCCcEEEecCCCCceeeEecCcc-eEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 26 PSGQFIISVSEDQTTRLHAPFVGKNTWYEMARP-QVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 26 ~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+++..++.+.-+..+.++|..+....-...... ...-..++.+.+..+.+++....+..|.+.|+.++
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTC
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCC
Confidence 445555444457788888987765211111100 00112334455555555665656778888887654
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=51.85 E-value=40 Score=20.80 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=39.1
Q ss_pred ECCCCCEEEEEeCCCcEEEecCCCCceeeEecCc-ceEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 24 WEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMAR-PQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 24 ~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++++|..++.+..++.+.+.|..+.+..-..... ........+.+.+..+.+++....++.|.+.|+.+.
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTC
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCC
Confidence 4556666655556778888898766521111110 000111244555554545666666889999998653
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=50.96 E-value=64 Score=22.92 Aligned_cols=75 Identities=7% Similarity=0.025 Sum_probs=44.4
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEecCCCeEEEeeCCh
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQ 92 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~ 92 (117)
..|.++...++++.+..+..++.+..+|..++....-...........|.++....++.+..|+. +-+..++...
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQ 480 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTT
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCC
Confidence 56888888888884556677777889988765421111101112234577777665555444554 4577777654
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=48.16 E-value=45 Score=20.35 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=27.3
Q ss_pred CeEEcCCCCC--eeEEEECCCCCEEEEEeCCC--cEEEecCCCCc
Q psy15190 9 CVTVGGHFGP--VRDIQWEPSGQFIISVSEDQ--TTRLHAPFVGK 49 (117)
Q Consensus 9 ~~~~~~h~~~--v~~i~~~~~~~~~~s~~~d~--~~~~wd~~~~~ 49 (117)
+..+ .|... ...+.|+. +.++.|.+.++ .++..|+.+++
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk 54 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR 54 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC
Confidence 3444 45433 55788886 67778877754 89999998887
No 259
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=48.03 E-value=45 Score=20.38 Aligned_cols=67 Identities=9% Similarity=0.057 Sum_probs=41.6
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEecCCCCc-eeeEecCcceEe--ccccEEEEEccCcEEEEecCCCeEEEe
Q psy15190 19 VRDIQWEPSGQFIISVSEDQTTRLHAPFVGK-NTWYEMARPQVH--GYDLTCLALISTFVFASGADEKVVRAF 88 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~-~~~~~~~~~~~~--~~~i~~~~~~~~~~~~s~~~d~~i~iw 88 (117)
...+-|+|+|.+.++ .|+.+.-++..+.. ..|.-.+..... -.++..+.+.+++.+.... |+.+.-.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 468889999998888 55888777764332 222211111111 1467888888888777777 7776433
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=47.95 E-value=48 Score=20.63 Aligned_cols=68 Identities=7% Similarity=-0.112 Sum_probs=35.7
Q ss_pred CCCCEEEEEeCCCcEEEecCCCCceeeEecCc-ceEeccccEEEEEccCcEEEEecCCCeEEEeeCChh
Q psy15190 26 PSGQFIISVSEDQTTRLHAPFVGKNTWYEMAR-PQVHGYDLTCLALISTFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 26 ~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
+++..++.+..++.+.++|..+.+..-..... ....-..++.+.+..+.+++....++.|.+.|+.++
T Consensus 143 ~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 143 YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTC
T ss_pred cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 44666555555677778887666521111110 000111234455555555666656778888887653
No 261
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.88 E-value=32 Score=24.78 Aligned_cols=22 Identities=5% Similarity=-0.087 Sum_probs=18.8
Q ss_pred cCcEEEEecCCCeEEEeeCChh
Q psy15190 72 STFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 72 ~~~~~~s~~~d~~i~iw~~~~~ 93 (117)
++..+++-|.|.++|+|++..+
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTT
T ss_pred CCcEEEEEEcCCeEEEEEcCCC
Confidence 4567899999999999999765
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=47.77 E-value=44 Score=23.27 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=34.5
Q ss_pred EEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEEEEec------CCCeEEEeeCCh
Q psy15190 31 IISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVFASGA------DEKVVRAFRTTQ 92 (117)
Q Consensus 31 ~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~~------~d~~i~iw~~~~ 92 (117)
++.++.|+.+...|..+++..|............+.+.-...++.++.++ .++.|+.+|...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~T 191 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT 191 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCC
Confidence 67778899999999988887776322100000111110011234555554 378888888754
No 263
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=47.49 E-value=43 Score=23.49 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=21.6
Q ss_pred CCEEEEEeCCCcEEEecCCCCceeeEe
Q psy15190 28 GQFIISVSEDQTTRLHAPFVGKNTWYE 54 (117)
Q Consensus 28 ~~~~~s~~~d~~~~~wd~~~~~~~~~~ 54 (117)
+..++.++.|+.+..+|..+++..|..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777788999999999999877763
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=45.05 E-value=52 Score=20.18 Aligned_cols=75 Identities=1% Similarity=-0.220 Sum_probs=43.3
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCce-eeEecCcc--------------eEeccccEEEEEcc-CcEEEEec
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKN-TWYEMARP--------------QVHGYDLTCLALIS-TFVFASGA 80 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~-~~~~~~~~--------------~~~~~~i~~~~~~~-~~~~~s~~ 80 (117)
.....+.|+++++.+.++..++.+..|+...... .+...... .........+++.+ ++.+..+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3456788999988777788888898888765431 12111000 00112345666664 55555554
Q ss_pred CCCeEEEeeCC
Q psy15190 81 DEKVVRAFRTT 91 (117)
Q Consensus 81 ~d~~i~iw~~~ 91 (117)
..+.+..+|..
T Consensus 99 ~~~~i~~~d~~ 109 (322)
T 2fp8_A 99 CYYHLSVVGSE 109 (322)
T ss_dssp TTTEEEEECTT
T ss_pred CCCCEEEEeCC
Confidence 44557777764
No 265
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.96 E-value=25 Score=26.49 Aligned_cols=21 Identities=10% Similarity=0.018 Sum_probs=17.8
Q ss_pred CcEEEEecCCCeEEEeeCChh
Q psy15190 73 TFVFASGADEKVVRAFRTTQN 93 (117)
Q Consensus 73 ~~~~~s~~~d~~i~iw~~~~~ 93 (117)
...+++-|.|+++|+|++.++
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTT
T ss_pred ccEEEEEeCCCEEEEEECCCC
Confidence 456889999999999999765
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=43.65 E-value=54 Score=20.00 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=24.7
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCC
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFV 47 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~ 47 (117)
.....+.|+++++.+++-...+.+..+|...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g 62 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG 62 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC
Confidence 4567899999999877776788888888753
No 267
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=43.18 E-value=75 Score=21.55 Aligned_cols=30 Identities=10% Similarity=0.159 Sum_probs=22.2
Q ss_pred eeEEEECCCCCEEEEEeCC------CcEEEecCCCCc
Q psy15190 19 VRDIQWEPSGQFIISVSED------QTTRLHAPFVGK 49 (117)
Q Consensus 19 v~~i~~~~~~~~~~s~~~d------~~~~~wd~~~~~ 49 (117)
-+.+...|+| .++++..+ +.+.+.|..+..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 4556778999 77776655 678899987665
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=42.61 E-value=24 Score=25.06 Aligned_cols=31 Identities=10% Similarity=0.033 Sum_probs=22.3
Q ss_pred CeeEEEEC-CCCCEEEEE-eCC----CcEEEecCCCC
Q psy15190 18 PVRDIQWE-PSGQFIISV-SED----QTTRLHAPFVG 48 (117)
Q Consensus 18 ~v~~i~~~-~~~~~~~s~-~~d----~~~~~wd~~~~ 48 (117)
.+...+|+ |+|+.++-. +.+ .+++++|+..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 46778999 999987643 322 35889998766
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=39.23 E-value=78 Score=20.61 Aligned_cols=58 Identities=12% Similarity=0.133 Sum_probs=34.1
Q ss_pred CCCEEEEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCc--------E-EEEecC--CCeEEEeeCC
Q psy15190 27 SGQFIISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTF--------V-FASGAD--EKVVRAFRTT 91 (117)
Q Consensus 27 ~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~-~~s~~~--d~~i~iw~~~ 91 (117)
....++...+.+.+.+||+ .++.... ...+.++.+...++- + +++--. +++++++++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~------~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHS------YNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEE------ECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEE------ccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 4556777788889999999 5652211 112344555533321 3 333333 5899999774
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=28.37 E-value=1e+02 Score=18.76 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=45.3
Q ss_pred eEEcCCCCCeeEEEECCCCCEE-EEEeCCCcEEEecCCCCceeeEecCcceEeccccEEEEEccCcEE-EEecCCCeEEE
Q psy15190 10 VTVGGHFGPVRDIQWEPSGQFI-ISVSEDQTTRLHAPFVGKNTWYEMARPQVHGYDLTCLALISTFVF-ASGADEKVVRA 87 (117)
Q Consensus 10 ~~~~~h~~~v~~i~~~~~~~~~-~s~~~d~~~~~wd~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~s~~~d~~i~i 87 (117)
+.+.+-.+.+..+.|+|++..+ +....++.+...|.. ++...... ..-..+..-+++..++.+ ++.-.++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~---l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP---LDFVKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE---CSSCSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe---cCCCCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 3445555679999999976554 446667777777775 44211110 011145566666665554 44445667777
Q ss_pred eeCC
Q psy15190 88 FRTT 91 (117)
Q Consensus 88 w~~~ 91 (117)
+++.
T Consensus 96 ~~v~ 99 (255)
T 3qqz_A 96 ISLT 99 (255)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 7654
No 271
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.67 E-value=83 Score=20.32 Aligned_cols=31 Identities=10% Similarity=0.185 Sum_probs=22.8
Q ss_pred CCeeEEEECCCCCEEEEE-eCCCcEEEecCCC
Q psy15190 17 GPVRDIQWEPSGQFIISV-SEDQTTRLHAPFV 47 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~-~~d~~~~~wd~~~ 47 (117)
...+.++|+|+++.++.+ +..+.+..|++..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 345789999999876555 4567788888753
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=27.54 E-value=83 Score=21.70 Aligned_cols=26 Identities=19% Similarity=0.392 Sum_probs=21.7
Q ss_pred CCEEEEEeCCCcEEEecCCCCceeeE
Q psy15190 28 GQFIISVSEDQTTRLHAPFVGKNTWY 53 (117)
Q Consensus 28 ~~~~~s~~~d~~~~~wd~~~~~~~~~ 53 (117)
+..++.++.|+.++.+|..+++..|+
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEE
Confidence 55677789999999999999986665
No 273
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=22.55 E-value=1.6e+02 Score=18.93 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=25.9
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCCcEEEecCCCC
Q psy15190 15 HFGPVRDIQWEPSGQFIISVSEDQTTRLHAPFVG 48 (117)
Q Consensus 15 h~~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~ 48 (117)
.-.....+.|.|+|+.+++-...+.+++++...+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 3445678999999998888766888888876444
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=21.37 E-value=2.3e+02 Score=20.18 Aligned_cols=75 Identities=12% Similarity=0.113 Sum_probs=45.9
Q ss_pred CCeeEEEECCCCCEEEEEeCCCcEEEecCCCCceeeEecCc--c--eEeccccEEEEEccCcE-EEEecCCCeEEEeeCC
Q psy15190 17 GPVRDIQWEPSGQFIISVSEDQTTRLHAPFVGKNTWYEMAR--P--QVHGYDLTCLALISTFV-FASGADEKVVRAFRTT 91 (117)
Q Consensus 17 ~~v~~i~~~~~~~~~~s~~~d~~~~~wd~~~~~~~~~~~~~--~--~~~~~~i~~~~~~~~~~-~~s~~~d~~i~iw~~~ 91 (117)
..|.++...++|...+ |..++.+..|+........-.... . ......|.++....++. +-.|+.++-+..+|..
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 4588888888887554 666767888888655421111100 0 01234567777655554 6667777778888875
Q ss_pred h
Q psy15190 92 Q 92 (117)
Q Consensus 92 ~ 92 (117)
.
T Consensus 436 ~ 436 (795)
T 4a2l_A 436 S 436 (795)
T ss_dssp T
T ss_pred C
Confidence 4
No 275
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=20.85 E-value=33 Score=23.22 Aligned_cols=17 Identities=24% Similarity=0.392 Sum_probs=10.5
Q ss_pred EEecCCCeEEEeeCChh
Q psy15190 77 ASGADEKVVRAFRTTQN 93 (117)
Q Consensus 77 ~s~~~d~~i~iw~~~~~ 93 (117)
..+..+|.+|+||++.+
T Consensus 161 ~~~~~~GVVrvWDVkd~ 177 (577)
T 3mwp_A 161 ARAGRDGVVRVWDVKNA 177 (577)
T ss_dssp -----CCEECSEECSCG
T ss_pred CCCCCCCeEEEEecCCH
Confidence 35677999999999754
Done!