Query psy15191
Match_columns 312
No_of_seqs 588 out of 1407
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 22:55:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15191.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15191hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 4E-45 1.4E-49 295.3 34.9 263 13-312 21-317 (321)
2 1vyh_C Platelet-activating fac 100.0 2.7E-44 9.2E-49 300.1 33.9 259 17-312 101-407 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1.4E-43 4.9E-48 288.8 36.7 264 13-312 44-339 (340)
4 3iz6_a 40S ribosomal protein R 100.0 1E-43 3.5E-48 293.9 34.4 280 8-312 50-371 (380)
5 2pbi_B Guanine nucleotide-bind 100.0 2.8E-42 9.5E-47 282.5 36.3 264 14-312 54-353 (354)
6 2ynn_A Coatomer subunit beta'; 100.0 1.9E-42 6.5E-47 277.8 31.8 239 38-312 4-255 (304)
7 3ow8_A WD repeat-containing pr 100.0 8.7E-42 3E-46 275.8 30.6 243 37-312 22-275 (321)
8 3frx_A Guanine nucleotide-bind 100.0 5.1E-41 1.7E-45 271.3 34.8 259 14-312 7-313 (319)
9 4gqb_B Methylosome protein 50; 100.0 2.8E-41 9.6E-46 274.8 33.3 228 46-312 81-327 (344)
10 2ynn_A Coatomer subunit beta'; 100.0 7.4E-41 2.5E-45 268.6 34.2 255 16-301 5-293 (304)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-40 5.5E-45 271.2 35.4 281 13-312 4-331 (345)
12 4g56_B MGC81050 protein; prote 100.0 4.2E-41 1.4E-45 275.8 30.5 254 20-312 38-339 (357)
13 4ery_A WD repeat-containing pr 100.0 7.4E-40 2.5E-44 263.8 37.3 268 13-312 12-308 (312)
14 1vyh_C Platelet-activating fac 100.0 5.6E-41 1.9E-45 280.1 31.5 236 40-312 101-365 (410)
15 1nr0_A Actin interacting prote 100.0 1.9E-40 6.4E-45 290.4 34.8 282 7-312 23-351 (611)
16 1nr0_A Actin interacting prote 100.0 1.2E-40 4.3E-45 291.5 32.9 278 7-312 173-607 (611)
17 2ymu_A WD-40 repeat protein; u 100.0 8.2E-40 2.8E-44 284.9 37.9 264 7-312 287-576 (577)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.8E-40 9.6E-45 269.8 32.0 254 36-312 4-279 (345)
19 2xzm_R RACK1; ribosome, transl 100.0 1.1E-39 3.9E-44 266.1 34.7 271 15-312 12-336 (343)
20 2hes_X YDR267CP; beta-propelle 100.0 8.5E-40 2.9E-44 265.4 32.9 275 13-312 3-324 (330)
21 1got_B GT-beta; complex (GTP-b 100.0 1.4E-39 4.8E-44 265.2 32.6 242 37-312 45-297 (340)
22 1erj_A Transcriptional repress 100.0 8.3E-39 2.8E-43 265.7 36.5 260 22-312 62-385 (393)
23 4aow_A Guanine nucleotide-bind 100.0 4.4E-39 1.5E-43 262.2 34.0 273 11-312 25-333 (340)
24 2pm7_B Protein transport prote 100.0 2.4E-39 8.1E-44 258.9 31.7 241 40-312 2-281 (297)
25 2ymu_A WD-40 repeat protein; u 100.0 8.6E-39 3E-43 278.5 37.6 264 7-312 246-535 (577)
26 3iz6_a 40S ribosomal protein R 100.0 3.5E-40 1.2E-44 272.7 26.8 251 32-312 51-325 (380)
27 2pbi_B Guanine nucleotide-bind 100.0 4.8E-39 1.6E-43 263.3 31.6 245 37-312 54-311 (354)
28 2hes_X YDR267CP; beta-propelle 100.0 5E-39 1.7E-43 260.8 30.7 252 36-312 3-276 (330)
29 3bg1_A Protein SEC13 homolog; 100.0 1.1E-39 3.8E-44 263.1 23.9 244 41-312 7-289 (316)
30 3zwl_B Eukaryotic translation 100.0 1.2E-37 4.2E-42 256.2 35.9 268 14-312 22-342 (369)
31 4gqb_B Methylosome protein 50; 100.0 6.5E-39 2.2E-43 260.9 26.4 235 45-312 28-285 (344)
32 3frx_A Guanine nucleotide-bind 100.0 9.4E-38 3.2E-42 252.1 31.8 231 37-300 7-257 (319)
33 3dm0_A Maltose-binding peripla 100.0 5.5E-38 1.9E-42 278.9 32.9 274 15-312 373-689 (694)
34 1erj_A Transcriptional repress 100.0 9E-38 3.1E-42 259.5 32.1 263 30-312 43-337 (393)
35 4ery_A WD repeat-containing pr 100.0 1.2E-37 4.2E-42 250.8 31.6 240 37-312 13-264 (312)
36 1gxr_A ESG1, transducin-like e 100.0 4.1E-37 1.4E-41 250.1 32.3 234 41-312 45-292 (337)
37 4g56_B MGC81050 protein; prote 100.0 2.4E-38 8.1E-43 259.4 25.0 239 42-312 37-297 (357)
38 1gxr_A ESG1, transducin-like e 100.0 1.4E-36 4.9E-41 246.9 34.9 255 18-312 45-333 (337)
39 1sq9_A Antiviral protein SKI8; 100.0 3.8E-37 1.3E-41 256.1 32.1 277 16-312 8-391 (397)
40 1r5m_A SIR4-interacting protei 100.0 2.8E-37 9.4E-42 258.8 31.0 279 7-312 71-421 (425)
41 3ei3_B DNA damage-binding prot 100.0 6.5E-37 2.2E-41 253.6 30.4 269 9-312 58-378 (383)
42 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-36 4E-41 250.8 31.6 276 12-312 18-357 (372)
43 2xzm_R RACK1; ribosome, transl 100.0 1.5E-36 5.1E-41 247.7 31.6 238 38-312 12-281 (343)
44 3gre_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 257.5 29.9 286 8-312 47-436 (437)
45 3jrp_A Fusion protein of prote 100.0 7.4E-37 2.5E-41 252.5 28.9 250 37-312 1-283 (379)
46 4gga_A P55CDC, cell division c 100.0 1.9E-36 6.6E-41 253.7 31.7 244 32-312 130-391 (420)
47 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-35 5.3E-40 238.4 34.8 253 14-312 8-292 (313)
48 3k26_A Polycomb protein EED; W 100.0 1.1E-36 3.8E-41 250.3 28.0 265 20-312 14-362 (366)
49 4aez_A CDC20, WD repeat-contai 100.0 7.6E-36 2.6E-40 248.6 31.9 244 32-312 118-376 (401)
50 2pm9_A Protein WEB1, protein t 100.0 5E-37 1.7E-41 256.9 24.4 287 6-312 47-410 (416)
51 2j04_B YDR362CP, TAU91; beta p 100.0 6.3E-37 2.1E-41 261.2 25.3 262 32-312 188-513 (524)
52 3i2n_A WD repeat-containing pr 100.0 7.8E-36 2.7E-40 244.5 30.9 255 45-312 63-349 (357)
53 4e54_B DNA damage-binding prot 100.0 1.5E-36 5.2E-41 255.4 26.6 265 16-312 111-426 (435)
54 4h5i_A Guanine nucleotide-exch 100.0 8.7E-36 3E-40 244.8 29.9 243 42-312 68-339 (365)
55 3v7d_B Cell division control p 100.0 8.9E-35 3.1E-39 246.7 34.9 266 7-312 145-459 (464)
56 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-35 4.8E-40 241.9 28.7 256 41-312 5-333 (351)
57 4a11_B DNA excision repair pro 100.0 3E-35 1E-39 245.2 31.2 262 32-312 28-361 (408)
58 3dwl_C Actin-related protein 2 100.0 7.4E-37 2.5E-41 252.7 20.8 238 42-301 6-272 (377)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.2E-34 7.4E-39 243.1 36.3 266 7-312 142-438 (445)
60 4ggc_A P55CDC, cell division c 100.0 7.2E-35 2.5E-39 235.1 31.4 244 32-312 50-311 (318)
61 1k8k_C P40, ARP2/3 complex 41 100.0 3.3E-35 1.1E-39 242.2 28.2 234 43-312 4-270 (372)
62 3vl1_A 26S proteasome regulato 100.0 6.8E-35 2.3E-39 244.3 30.3 258 32-312 124-415 (420)
63 3ei3_B DNA damage-binding prot 100.0 3.4E-35 1.2E-39 243.3 28.1 249 32-312 58-335 (383)
64 3v7d_B Cell division control p 100.0 2.7E-34 9.4E-39 243.7 33.2 261 15-312 112-417 (464)
65 3dwl_C Actin-related protein 2 100.0 1.9E-35 6.4E-40 244.3 24.8 223 12-256 21-280 (377)
66 3dm0_A Maltose-binding peripla 100.0 9.7E-35 3.3E-39 258.1 30.8 233 38-312 373-628 (694)
67 2pm9_A Protein WEB1, protein t 100.0 4.1E-35 1.4E-39 245.3 26.8 251 32-312 50-333 (416)
68 3gre_A Serine/threonine-protei 100.0 3.1E-35 1E-39 247.7 26.0 262 32-312 48-355 (437)
69 2pm7_B Protein transport prote 100.0 1.7E-34 5.9E-39 230.8 28.8 214 32-258 36-286 (297)
70 2j04_B YDR362CP, TAU91; beta p 100.0 9.8E-36 3.3E-40 253.9 22.6 225 65-312 173-424 (524)
71 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-34 1.2E-38 269.6 34.5 285 7-312 640-1030(1249)
72 1pgu_A Actin interacting prote 100.0 2.9E-34 9.8E-39 251.6 31.8 272 7-312 186-610 (615)
73 1r5m_A SIR4-interacting protei 100.0 1.9E-34 6.6E-39 241.6 29.0 228 46-312 107-357 (425)
74 4aow_A Guanine nucleotide-bind 100.0 6.6E-34 2.3E-38 231.6 31.2 243 32-312 23-282 (340)
75 3vl1_A 26S proteasome regulato 100.0 5.7E-35 1.9E-39 244.8 24.7 244 32-312 83-361 (420)
76 2xyi_A Probable histone-bindin 100.0 3.6E-34 1.2E-38 240.6 29.5 255 41-312 122-406 (430)
77 3mkq_A Coatomer beta'-subunit; 100.0 2.9E-34 1E-38 259.5 29.8 239 38-312 4-255 (814)
78 3dw8_B Serine/threonine-protei 100.0 5.3E-34 1.8E-38 240.8 29.2 255 39-301 73-437 (447)
79 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-33 4.7E-38 237.5 31.4 244 32-312 158-410 (435)
80 3jro_A Fusion protein of prote 100.0 1.2E-34 4.1E-39 259.1 26.0 247 40-312 2-281 (753)
81 1sq9_A Antiviral protein SKI8; 100.0 2.6E-34 8.9E-39 239.0 25.7 242 39-312 8-318 (397)
82 4e54_B DNA damage-binding prot 100.0 1.5E-34 5.1E-39 243.3 24.2 249 37-312 109-383 (435)
83 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-33 9.8E-38 225.1 29.9 234 37-312 8-251 (313)
84 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-33 4.3E-38 255.3 31.1 236 32-298 40-290 (814)
85 3zwl_B Eukaryotic translation 100.0 5.9E-33 2E-37 228.3 32.4 231 38-302 23-281 (369)
86 3dw8_B Serine/threonine-protei 100.0 5.7E-34 2E-38 240.5 26.8 243 46-312 27-369 (447)
87 3i2n_A WD repeat-containing pr 100.0 1.1E-33 3.8E-38 231.7 27.5 240 41-312 12-287 (357)
88 3mmy_A MRNA export factor; mRN 100.0 9.4E-34 3.2E-38 232.9 27.1 249 32-303 24-338 (368)
89 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-34 2.8E-38 257.2 28.2 159 134-312 433-657 (902)
90 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-33 7.1E-38 234.0 28.5 246 32-312 62-338 (402)
91 3sfz_A APAF-1, apoptotic pepti 100.0 6.7E-33 2.3E-37 260.9 34.4 259 17-312 608-909 (1249)
92 1yfq_A Cell cycle arrest prote 100.0 1.5E-33 5.1E-38 229.7 26.1 237 41-312 5-278 (342)
93 1yfq_A Cell cycle arrest prote 100.0 5.7E-33 2E-37 226.3 29.3 240 40-303 49-315 (342)
94 3bg1_A Protein SEC13 homolog; 100.0 1.6E-33 5.4E-38 227.1 24.4 211 32-257 40-293 (316)
95 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.6E-32 2.3E-36 227.9 33.2 232 32-312 144-387 (445)
96 3k26_A Polycomb protein EED; W 100.0 1.9E-33 6.7E-38 231.0 22.8 254 42-312 13-314 (366)
97 2w18_A PALB2, fancn, partner a 100.0 2.2E-32 7.7E-37 215.5 27.5 261 7-312 66-353 (356)
98 3jrp_A Fusion protein of prote 100.0 1.4E-32 4.7E-37 227.0 27.7 233 14-257 1-287 (379)
99 1pgu_A Actin interacting prote 100.0 6.9E-32 2.4E-36 236.6 32.8 261 11-312 27-324 (615)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-31 4.8E-36 226.2 32.1 235 45-299 100-373 (450)
101 4a11_B DNA excision repair pro 100.0 8.7E-33 3E-37 230.4 23.9 241 7-259 26-367 (408)
102 4h5i_A Guanine nucleotide-exch 100.0 5.4E-32 1.9E-36 222.3 28.2 195 47-259 133-345 (365)
103 3vu4_A KMHSV2; beta-propeller 100.0 7.5E-32 2.6E-36 220.7 28.6 153 149-312 148-332 (355)
104 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-31 5.9E-36 217.6 29.4 211 38-259 48-339 (351)
105 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-32 7.3E-37 228.9 23.8 222 43-312 48-293 (588)
106 3lrv_A PRE-mRNA-splicing facto 100.0 2.2E-32 7.5E-37 223.1 23.4 222 64-312 47-288 (343)
107 4gga_A P55CDC, cell division c 100.0 7.9E-31 2.7E-35 219.6 31.0 234 7-259 128-397 (420)
108 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-31 6.4E-36 222.2 25.9 236 50-312 37-295 (402)
109 4gq1_A NUP37; propeller, trans 100.0 9.9E-32 3.4E-36 223.0 23.9 217 65-300 101-379 (393)
110 4aez_A CDC20, WD repeat-contai 100.0 6.1E-31 2.1E-35 219.0 28.3 233 40-312 84-332 (401)
111 3jro_A Fusion protein of prote 100.0 6.9E-32 2.4E-36 241.3 23.0 211 37-258 43-286 (753)
112 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.3E-31 2.1E-35 222.2 27.6 230 48-312 5-335 (450)
113 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-31 1.3E-35 239.9 27.9 242 43-312 13-308 (902)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-31 4.9E-36 224.0 22.1 260 20-300 48-350 (588)
115 1p22_A F-BOX/WD-repeat protein 100.0 7.3E-30 2.5E-34 214.8 30.1 222 42-312 128-361 (435)
116 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-30 8.3E-35 211.0 24.1 234 32-303 63-325 (343)
117 4ggc_A P55CDC, cell division c 100.0 6.7E-29 2.3E-33 200.1 31.7 233 7-258 48-316 (318)
118 1l0q_A Surface layer protein; 100.0 4.1E-28 1.4E-32 201.3 35.7 240 31-312 16-271 (391)
119 3bws_A Protein LP49; two-domai 100.0 3.5E-28 1.2E-32 204.3 33.2 241 32-312 149-428 (433)
120 2xyi_A Probable histone-bindin 100.0 3E-28 1E-32 204.5 28.6 204 37-258 171-411 (430)
121 3mmy_A MRNA export factor; mRN 100.0 7.2E-29 2.5E-33 203.8 23.9 236 10-258 25-347 (368)
122 1l0q_A Surface layer protein; 100.0 6.2E-26 2.1E-30 188.2 34.7 228 7-259 15-277 (391)
123 3bws_A Protein LP49; two-domai 100.0 2.1E-26 7.1E-31 193.6 31.5 245 32-312 106-386 (433)
124 4gq1_A NUP37; propeller, trans 100.0 8E-28 2.7E-32 199.5 21.5 163 96-260 98-289 (393)
125 2w18_A PALB2, fancn, partner a 100.0 3.8E-27 1.3E-31 185.8 22.2 196 8-255 139-355 (356)
126 3vu4_A KMHSV2; beta-propeller 100.0 9E-27 3.1E-31 190.6 24.5 247 7-259 2-338 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.4E-25 1.8E-29 183.6 31.0 225 31-293 163-410 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-25 5.7E-30 186.7 24.9 251 29-312 95-383 (415)
129 2ojh_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 173.1 27.4 240 30-302 25-293 (297)
130 1nir_A Nitrite reductase; hemo 99.9 3.1E-23 1.1E-27 178.2 32.8 281 7-312 162-510 (543)
131 1ri6_A Putative isomerase YBHE 99.9 1.2E-22 4E-27 165.2 33.9 269 15-312 5-304 (343)
132 1nir_A Nitrite reductase; hemo 99.9 5.3E-23 1.8E-27 176.8 29.6 275 17-312 151-454 (543)
133 3hfq_A Uncharacterized protein 99.9 5.6E-22 1.9E-26 161.7 32.4 269 24-312 15-313 (347)
134 3u4y_A Uncharacterized protein 99.9 5.3E-22 1.8E-26 160.7 31.7 260 14-312 9-300 (331)
135 3scy_A Hypothetical bacterial 99.9 4.7E-21 1.6E-25 157.2 33.2 267 23-312 25-333 (361)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-22 6.2E-27 179.8 26.6 236 43-312 116-431 (706)
137 1xfd_A DIP, dipeptidyl aminope 99.9 3.6E-22 1.2E-26 178.3 27.8 277 8-312 22-389 (723)
138 1k32_A Tricorn protease; prote 99.9 2.1E-22 7E-27 186.4 26.4 257 7-302 186-493 (1045)
139 2ecf_A Dipeptidyl peptidase IV 99.9 6E-22 2.1E-26 177.4 28.1 280 7-312 41-409 (741)
140 3vgz_A Uncharacterized protein 99.9 7.6E-21 2.6E-25 155.2 32.1 255 11-301 49-334 (353)
141 2oit_A Nucleoporin 214KDA; NH2 99.9 6.7E-23 2.3E-27 171.6 19.1 145 135-299 91-259 (434)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-22 6.6E-27 168.8 21.5 205 47-259 36-280 (434)
143 2ecf_A Dipeptidyl peptidase IV 99.9 4E-22 1.4E-26 178.5 24.4 230 47-312 36-363 (741)
144 1pby_B Quinohemoprotein amine 99.9 9.2E-21 3.2E-25 153.6 27.6 238 32-312 16-306 (337)
145 2z3z_A Dipeptidyl aminopeptida 99.9 6E-21 2E-25 170.0 28.1 249 31-301 47-376 (706)
146 3vgz_A Uncharacterized protein 99.9 1.8E-20 6.3E-25 152.9 28.4 238 46-312 39-299 (353)
147 3u4y_A Uncharacterized protein 99.9 3.8E-20 1.3E-24 149.8 28.0 240 8-258 24-305 (331)
148 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.6E-19 5.6E-24 148.1 32.0 266 25-312 14-337 (365)
149 1ri6_A Putative isomerase YBHE 99.9 3.7E-20 1.3E-24 150.4 27.5 227 66-312 6-258 (343)
150 1xfd_A DIP, dipeptidyl aminope 99.9 8.1E-22 2.8E-26 176.1 19.1 224 49-298 18-323 (723)
151 2ojh_A Uncharacterized protein 99.9 8.4E-21 2.9E-25 150.8 22.4 206 70-302 17-238 (297)
152 3o4h_A Acylamino-acid-releasin 99.9 6.3E-21 2.2E-25 166.1 22.2 222 47-312 21-272 (582)
153 1jmx_B Amine dehydrogenase; ox 99.9 8.1E-20 2.8E-24 148.8 25.2 225 62-312 8-321 (349)
154 1k32_A Tricorn protease; prote 99.9 3.7E-20 1.3E-24 171.4 23.9 241 38-312 194-457 (1045)
155 1z68_A Fibroblast activation p 99.9 2.6E-20 8.8E-25 166.3 20.1 266 7-301 21-376 (719)
156 3pe7_A Oligogalacturonate lyas 99.9 8.1E-20 2.8E-24 151.2 21.2 258 13-300 46-370 (388)
157 3o4h_A Acylamino-acid-releasin 99.9 6.6E-20 2.2E-24 159.8 21.0 246 11-303 30-304 (582)
158 3hfq_A Uncharacterized protein 99.8 3.9E-18 1.3E-22 138.9 28.9 211 32-256 68-316 (347)
159 3scy_A Hypothetical bacterial 99.8 2.8E-17 9.4E-22 134.7 34.1 237 5-256 52-336 (361)
160 1pby_B Quinohemoprotein amine 99.8 3E-18 1E-22 138.7 24.8 202 32-259 61-312 (337)
161 1jmx_B Amine dehydrogenase; ox 99.8 8.3E-18 2.8E-22 136.9 25.7 215 18-258 14-326 (349)
162 1z68_A Fibroblast activation p 99.8 1.2E-19 4.2E-24 161.9 14.5 221 52-298 20-329 (719)
163 4a5s_A Dipeptidyl peptidase 4 99.8 2.5E-18 8.4E-23 153.8 22.7 229 48-300 17-339 (740)
164 1q7f_A NHL, brain tumor CG1071 99.8 1.7E-16 5.7E-21 125.7 28.9 229 45-312 27-276 (286)
165 3pe7_A Oligogalacturonate lyas 99.8 6.6E-18 2.2E-22 139.7 21.5 251 32-312 15-325 (388)
166 3c5m_A Oligogalacturonate lyas 99.8 8.5E-18 2.9E-22 139.3 21.4 233 31-301 64-371 (396)
167 3fvz_A Peptidyl-glycine alpha- 99.8 7.7E-17 2.6E-21 130.3 26.1 236 47-312 23-318 (329)
168 3e5z_A Putative gluconolactona 99.8 1.7E-15 5.7E-20 120.6 27.8 230 37-301 17-277 (296)
169 2dg1_A DRP35, lactonase; beta 99.8 5.3E-15 1.8E-19 119.7 29.9 240 37-301 34-300 (333)
170 2oiz_A Aromatic amine dehydrog 99.8 1.8E-15 6.2E-20 123.7 26.8 251 13-293 14-360 (361)
171 3azo_A Aminopeptidase; POP fam 99.8 3.3E-16 1.1E-20 138.5 24.1 236 42-312 18-319 (662)
172 3c5m_A Oligogalacturonate lyas 99.7 2.5E-16 8.5E-21 130.5 18.9 234 32-300 15-302 (396)
173 3azo_A Aminopeptidase; POP fam 99.7 1.4E-15 4.8E-20 134.5 23.8 241 32-298 52-354 (662)
174 2xdw_A Prolyl endopeptidase; a 99.7 9.9E-15 3.4E-19 130.0 29.2 239 46-312 123-410 (710)
175 4a5s_A Dipeptidyl peptidase 4 99.7 1E-15 3.4E-20 137.0 22.6 231 10-258 24-354 (740)
176 1rwi_B Serine/threonine-protei 99.7 1.6E-14 5.5E-19 113.2 26.0 226 49-312 25-260 (270)
177 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.4E-15 1.5E-19 121.8 23.5 178 73-258 117-342 (365)
178 2bkl_A Prolyl endopeptidase; m 99.7 1.4E-14 4.9E-19 128.6 27.5 239 45-312 118-393 (695)
179 1q7f_A NHL, brain tumor CG1071 99.7 3.1E-13 1E-17 106.9 29.4 205 32-258 56-281 (286)
180 2gop_A Trilobed protease; beta 99.7 3E-14 1E-18 115.9 22.7 218 31-302 47-321 (347)
181 3dsm_A Uncharacterized protein 99.7 7.2E-14 2.5E-18 112.7 24.4 250 32-312 22-298 (328)
182 3fvz_A Peptidyl-glycine alpha- 99.7 1.3E-13 4.4E-18 111.4 25.4 216 30-258 72-323 (329)
183 3no2_A Uncharacterized protein 99.6 4E-13 1.4E-17 105.4 24.6 204 65-299 5-231 (276)
184 2gop_A Trilobed protease; beta 99.6 1.9E-13 6.3E-18 111.2 23.0 195 74-312 42-288 (347)
185 2dg1_A DRP35, lactonase; beta 99.6 1.2E-13 4E-18 111.7 21.4 235 48-312 6-259 (333)
186 1rwi_B Serine/threonine-protei 99.6 4.5E-13 1.6E-17 104.9 23.7 232 4-258 25-265 (270)
187 2z2n_A Virginiamycin B lyase; 99.6 8.1E-12 2.8E-16 99.1 30.4 222 43-298 10-242 (299)
188 3hrp_A Uncharacterized protein 99.6 9.3E-12 3.2E-16 103.3 31.4 230 48-303 131-402 (409)
189 2z2n_A Virginiamycin B lyase; 99.6 4.1E-11 1.4E-15 95.0 33.8 231 32-299 41-284 (299)
190 1qks_A Cytochrome CD1 nitrite 99.6 2.1E-11 7.1E-16 104.9 34.0 271 8-299 160-458 (567)
191 1yr2_A Prolyl oligopeptidase; 99.6 3E-12 1E-16 114.6 28.8 237 46-312 161-437 (741)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.1E-12 1.8E-16 101.1 27.2 227 44-298 14-285 (314)
193 3dsm_A Uncharacterized protein 99.6 4.2E-12 1.4E-16 102.4 25.5 203 32-256 69-301 (328)
194 3e5z_A Putative gluconolactona 99.6 3.7E-12 1.2E-16 101.2 24.8 199 31-258 54-287 (296)
195 3g4e_A Regucalcin; six bladed 99.5 7.3E-11 2.5E-15 93.8 30.4 228 44-299 9-260 (297)
196 1xip_A Nucleoporin NUP159; bet 99.5 5.8E-13 2E-17 108.3 17.6 185 49-300 39-233 (388)
197 1qks_A Cytochrome CD1 nitrite 99.5 3.6E-11 1.2E-15 103.4 27.4 183 65-259 167-375 (567)
198 2qc5_A Streptogramin B lactona 99.5 1.8E-10 6.3E-15 91.3 29.8 221 45-299 17-248 (300)
199 3no2_A Uncharacterized protein 99.5 1.5E-11 5E-16 96.5 22.5 180 98-302 4-186 (276)
200 2oiz_A Aromatic amine dehydrog 99.5 2.3E-11 7.9E-16 99.3 24.2 216 5-239 110-360 (361)
201 2mad_H Methylamine dehydrogena 99.5 3.7E-10 1.3E-14 92.4 31.2 263 12-312 30-346 (373)
202 2qc5_A Streptogramin B lactona 99.5 9.6E-10 3.3E-14 87.1 33.0 232 32-298 46-289 (300)
203 2xdw_A Prolyl endopeptidase; a 99.5 1.1E-11 3.7E-16 110.5 23.4 187 91-303 128-358 (710)
204 3dr2_A Exported gluconolactona 99.5 6E-11 2.1E-15 94.6 25.3 230 38-300 35-296 (305)
205 2ghs_A AGR_C_1268P; regucalcin 99.5 2.9E-10 9.9E-15 91.5 28.7 221 49-299 50-290 (326)
206 2bkl_A Prolyl endopeptidase; m 99.4 2.3E-11 7.9E-16 108.1 20.4 191 90-312 123-345 (695)
207 1xip_A Nucleoporin NUP159; bet 99.4 9.2E-12 3.2E-16 101.3 16.3 139 138-312 39-187 (388)
208 2qe8_A Uncharacterized protein 99.4 3.4E-10 1.2E-14 91.8 25.4 225 48-301 17-311 (343)
209 2mad_H Methylamine dehydrogena 99.4 3.5E-09 1.2E-13 86.6 31.4 211 32-259 102-352 (373)
210 3iuj_A Prolyl endopeptidase; h 99.4 1.3E-10 4.6E-15 103.1 24.3 222 45-299 126-389 (693)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.5E-09 5.1E-14 86.7 28.0 205 31-258 50-300 (314)
212 3sjl_D Methylamine dehydrogena 99.4 4.3E-10 1.5E-14 91.2 24.1 229 32-291 114-384 (386)
213 3c75_H MADH, methylamine dehyd 99.4 1.5E-09 5.2E-14 89.5 26.5 228 12-259 82-404 (426)
214 3sjl_D Methylamine dehydrogena 99.4 2.2E-09 7.5E-14 87.1 26.1 263 11-311 41-358 (386)
215 3hrp_A Uncharacterized protein 99.3 8.8E-09 3E-13 85.4 28.1 227 12-255 140-408 (409)
216 1yr2_A Prolyl oligopeptidase; 99.3 9.2E-10 3.2E-14 98.6 23.3 188 92-312 167-389 (741)
217 3g4e_A Regucalcin; six bladed 99.3 8.9E-09 3E-13 81.7 26.7 213 6-245 17-260 (297)
218 1mda_H Methylamine dehydrogena 99.2 1.5E-08 5.1E-13 82.2 23.9 224 32-290 51-366 (368)
219 3dr2_A Exported gluconolactona 99.2 2.1E-08 7E-13 79.9 24.2 211 6-248 49-298 (305)
220 2hz6_A Endoplasmic reticulum t 99.2 1E-10 3.5E-15 95.8 10.8 175 65-258 9-193 (369)
221 3c75_H MADH, methylamine dehyd 99.2 1.1E-08 3.8E-13 84.4 21.9 228 64-311 83-397 (426)
222 2ece_A 462AA long hypothetical 99.2 4.3E-08 1.5E-12 80.3 24.0 261 24-299 42-399 (462)
223 2ghs_A AGR_C_1268P; regucalcin 99.2 3E-07 1E-11 73.9 29.0 208 7-245 54-290 (326)
224 1yiq_A Quinohemoprotein alcoho 99.1 3.3E-08 1.1E-12 87.5 21.9 181 97-297 244-534 (689)
225 1yiq_A Quinohemoprotein alcoho 99.1 4.5E-08 1.5E-12 86.6 22.6 179 30-216 83-346 (689)
226 1kb0_A Quinohemoprotein alcoho 99.1 5.7E-08 2E-12 85.8 23.0 179 30-216 90-354 (677)
227 1kb0_A Quinohemoprotein alcoho 99.1 4.5E-08 1.5E-12 86.4 22.3 168 110-297 284-536 (677)
228 2ece_A 462AA long hypothetical 99.0 6.4E-08 2.2E-12 79.3 20.7 188 97-300 93-340 (462)
229 2iwa_A Glutamine cyclotransfer 99.0 3.6E-07 1.2E-11 70.3 23.5 204 38-258 10-238 (266)
230 1fwx_A Nitrous oxide reductase 99.0 9.3E-08 3.2E-12 81.1 21.5 192 98-312 100-357 (595)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.0 7.8E-07 2.7E-11 72.9 26.7 181 67-259 145-339 (376)
232 2qe8_A Uncharacterized protein 99.0 1.5E-07 5.2E-12 76.2 21.6 233 5-254 19-318 (343)
233 1fwx_A Nitrous oxide reductase 99.0 2.1E-08 7.3E-13 85.0 16.6 219 64-301 100-408 (595)
234 2hz6_A Endoplasmic reticulum t 99.0 1.8E-09 6.2E-14 88.3 10.0 166 30-216 22-200 (369)
235 3nol_A Glutamine cyclotransfer 98.9 4.3E-07 1.5E-11 69.1 19.9 190 38-246 32-244 (262)
236 3iuj_A Prolyl endopeptidase; h 98.9 1.1E-07 3.7E-12 84.5 19.4 179 93-300 134-345 (693)
237 2iwa_A Glutamine cyclotransfer 98.9 1.6E-06 5.5E-11 66.7 21.6 179 96-299 29-224 (266)
238 1npe_A Nidogen, entactin; glyc 98.9 1.2E-05 4.1E-10 62.5 27.8 212 48-293 36-263 (267)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.9 6.3E-06 2.1E-10 67.5 26.2 207 30-259 66-298 (376)
240 3nok_A Glutaminyl cyclase; bet 98.8 9.7E-07 3.3E-11 67.2 19.1 188 38-245 44-253 (268)
241 2fp8_A Strictosidine synthase; 98.8 4.2E-06 1.4E-10 67.0 24.3 219 48-298 19-300 (322)
242 3hxj_A Pyrrolo-quinoline quino 98.8 1.2E-06 4E-11 70.3 20.6 201 66-303 108-316 (330)
243 1mda_H Methylamine dehydrogena 98.8 2.5E-07 8.6E-12 75.1 16.3 75 142-217 269-355 (368)
244 3nol_A Glutamine cyclotransfer 98.8 5.8E-07 2E-11 68.4 16.9 188 99-300 53-244 (262)
245 2p4o_A Hypothetical protein; p 98.8 2.2E-05 7.5E-10 62.3 26.1 230 37-300 22-277 (306)
246 3mbr_X Glutamine cyclotransfer 98.8 5.4E-06 1.9E-10 62.5 21.0 189 38-245 10-222 (243)
247 3nok_A Glutaminyl cyclase; bet 98.7 3.5E-06 1.2E-10 64.1 19.0 186 99-299 65-253 (268)
248 3hxj_A Pyrrolo-quinoline quino 98.7 1.4E-06 4.9E-11 69.8 18.0 191 32-255 45-242 (330)
249 1kv9_A Type II quinohemoprotei 98.7 4.9E-06 1.7E-10 73.5 22.4 179 30-216 79-341 (668)
250 1kv9_A Type II quinohemoprotei 98.6 6.7E-06 2.3E-10 72.6 20.8 142 110-259 271-490 (668)
251 3mbr_X Glutamine cyclotransfer 98.6 2.1E-05 7.1E-10 59.3 20.2 188 99-300 31-223 (243)
252 1npe_A Nidogen, entactin; glyc 98.6 9.6E-05 3.3E-09 57.3 25.8 145 99-257 48-198 (267)
253 1k3i_A Galactose oxidase precu 98.6 6.1E-06 2.1E-10 72.8 18.6 247 29-300 221-530 (656)
254 2fp8_A Strictosidine synthase; 98.6 4.9E-05 1.7E-09 60.7 22.3 186 95-299 26-247 (322)
255 4a2l_A BT_4663, two-component 98.5 0.00052 1.8E-08 62.0 31.7 227 47-298 214-469 (795)
256 2ad6_A Methanol dehydrogenase 98.5 0.00017 5.9E-09 62.4 25.4 183 24-217 72-344 (571)
257 2ad6_A Methanol dehydrogenase 98.5 6.7E-05 2.3E-09 64.9 22.5 141 110-259 273-496 (571)
258 3qqz_A Putative uncharacterize 98.5 0.00021 7.1E-09 54.6 23.7 204 42-254 21-250 (255)
259 4a2l_A BT_4663, two-component 98.5 0.00077 2.6E-08 60.9 31.6 222 48-298 263-515 (795)
260 1w6s_A Methanol dehydrogenase 98.4 8.5E-05 2.9E-09 64.4 21.8 142 109-259 278-505 (599)
261 1w6s_A Methanol dehydrogenase 98.4 0.00048 1.6E-08 59.8 25.4 184 24-216 72-350 (599)
262 1flg_A Protein (quinoprotein e 98.4 0.00029 9.8E-09 61.1 23.5 168 109-297 291-545 (582)
263 2xe4_A Oligopeptidase B; hydro 98.3 0.00031 1.1E-08 63.0 22.6 190 49-255 175-398 (751)
264 1flg_A Protein (quinoprotein e 98.2 0.0011 3.8E-08 57.4 24.2 179 30-217 81-364 (582)
265 2xe4_A Oligopeptidase B; hydro 98.2 0.00035 1.2E-08 62.7 20.8 151 92-257 178-354 (751)
266 4hw6_A Hypothetical protein, I 98.2 0.00097 3.3E-08 55.6 22.1 142 101-257 154-304 (433)
267 3v9f_A Two-component system se 98.1 0.0015 5E-08 59.0 23.9 218 48-298 363-600 (781)
268 1k3i_A Galactose oxidase precu 98.1 0.00044 1.5E-08 61.0 19.8 221 65-301 198-476 (656)
269 3tc9_A Hypothetical hydrolase; 98.1 0.00041 1.4E-08 57.8 18.0 141 138-298 138-287 (430)
270 3tc9_A Hypothetical hydrolase; 98.0 0.0006 2E-08 56.8 17.8 153 90-257 139-301 (430)
271 2p4o_A Hypothetical protein; p 97.9 0.0041 1.4E-07 49.1 21.3 183 96-299 40-230 (306)
272 2xbg_A YCF48-like protein; pho 97.9 0.005 1.7E-07 49.2 24.4 144 136-298 162-309 (327)
273 3v65_B Low-density lipoprotein 97.9 0.0062 2.1E-07 49.9 27.5 206 33-259 102-320 (386)
274 3v9f_A Two-component system se 97.9 0.013 4.3E-07 52.9 29.0 224 48-298 258-512 (781)
275 2p9w_A MAL S 1 allergenic prot 97.9 0.0037 1.3E-07 49.3 18.9 118 138-257 64-215 (334)
276 3v64_C Agrin; beta propeller, 97.9 0.0066 2.3E-07 49.0 25.5 144 101-258 87-235 (349)
277 1ijq_A LDL receptor, low-densi 97.9 0.0062 2.1E-07 48.4 25.2 162 109-298 10-181 (316)
278 3qqz_A Putative uncharacterize 97.8 0.0053 1.8E-07 46.9 23.0 125 131-256 21-150 (255)
279 2p9w_A MAL S 1 allergenic prot 97.8 0.0037 1.2E-07 49.4 17.9 161 135-302 11-206 (334)
280 3v65_B Low-density lipoprotein 97.8 0.0092 3.2E-07 48.9 25.2 170 74-257 95-277 (386)
281 3p5b_L Low density lipoprotein 97.8 0.011 3.9E-07 48.6 23.8 166 106-298 89-263 (400)
282 3amr_A 3-phytase; beta-propell 97.8 0.0094 3.2E-07 47.5 20.2 187 65-256 40-262 (355)
283 1tl2_A L10, protein (tachylect 97.7 0.0031 1.1E-07 46.5 15.1 146 138-298 42-199 (236)
284 1n7d_A LDL receptor, low-densi 97.6 0.0013 4.4E-08 58.4 14.3 207 33-258 392-615 (699)
285 3v64_C Agrin; beta propeller, 97.6 0.017 5.8E-07 46.6 31.8 206 33-259 59-277 (349)
286 2ism_A Putative oxidoreductase 97.6 0.019 6.5E-07 46.4 25.7 65 228-299 269-333 (352)
287 3sov_A LRP-6, low-density lipo 97.6 0.019 6.6E-07 45.6 25.8 193 48-260 35-241 (318)
288 3amr_A 3-phytase; beta-propell 97.6 0.02 7E-07 45.6 21.7 180 94-299 35-250 (355)
289 3pbp_A Nucleoporin NUP82; beta 97.5 0.0069 2.4E-07 49.4 15.8 116 138-253 67-208 (452)
290 3pbp_A Nucleoporin NUP82; beta 97.5 0.025 8.6E-07 46.2 19.9 148 146-298 30-197 (452)
291 3kya_A Putative phosphatase; s 97.5 0.015 5E-07 49.0 18.3 152 138-298 140-327 (496)
292 3p5b_L Low density lipoprotein 97.5 0.031 1.1E-06 45.9 28.9 209 33-260 98-323 (400)
293 2vpj_A Kelch-like protein 12; 97.5 0.024 8.1E-07 44.5 20.4 212 65-302 15-264 (301)
294 2ism_A Putative oxidoreductase 97.4 0.013 4.4E-07 47.4 16.6 105 138-245 32-153 (352)
295 3m0c_C LDL receptor, low-densi 97.4 0.064 2.2E-06 48.2 24.3 165 106-298 401-575 (791)
296 3das_A Putative oxidoreductase 97.4 0.032 1.1E-06 44.7 26.4 243 41-299 25-326 (347)
297 3sre_A PON1, serum paraoxonase 97.4 0.037 1.3E-06 44.5 23.3 172 107-299 81-285 (355)
298 4hw6_A Hypothetical protein, I 97.4 0.046 1.6E-06 45.5 28.4 216 25-256 162-432 (433)
299 3kya_A Putative phosphatase; s 97.4 0.051 1.8E-06 45.8 25.6 196 49-254 140-407 (496)
300 2g8s_A Glucose/sorbosone dehyd 97.3 0.023 7.8E-07 45.9 17.1 156 138-298 19-215 (353)
301 2xbg_A YCF48-like protein; pho 97.3 0.04 1.4E-06 43.9 26.6 142 137-299 122-268 (327)
302 3ii7_A Kelch-like protein 7; p 97.3 0.039 1.3E-06 43.4 19.7 210 66-303 13-259 (306)
303 1tl2_A L10, protein (tachylect 97.3 0.0082 2.8E-07 44.3 12.0 109 178-298 41-152 (236)
304 3sre_A PON1, serum paraoxonase 97.2 0.054 1.8E-06 43.6 21.5 111 136-254 164-295 (355)
305 3sov_A LRP-6, low-density lipo 97.2 0.057 1.9E-06 42.8 24.6 144 101-257 49-197 (318)
306 4a0p_A LRP6, LRP-6, low-densit 97.2 0.1 3.6E-06 45.6 23.4 166 107-298 13-183 (628)
307 2xn4_A Kelch-like protein 2; s 97.2 0.057 2E-06 42.3 18.9 210 66-303 17-263 (302)
308 3a9g_A Putative uncharacterize 97.2 0.045 1.5E-06 44.2 16.8 152 137-298 29-215 (354)
309 3a9g_A Putative uncharacterize 97.1 0.071 2.4E-06 43.0 25.8 64 227-299 259-330 (354)
310 3m0c_C LDL receptor, low-densi 97.1 0.14 4.7E-06 46.1 28.1 195 47-259 423-634 (791)
311 1ijq_A LDL receptor, low-densi 97.1 0.07 2.4E-06 42.3 31.5 213 25-259 10-240 (316)
312 1n7d_A LDL receptor, low-densi 97.1 0.0092 3.1E-07 53.0 13.0 113 138-257 454-571 (699)
313 1cru_A Protein (soluble quinop 97.0 0.12 3.9E-06 43.4 18.1 106 138-246 28-163 (454)
314 3das_A Putative oxidoreductase 96.9 0.12 4E-06 41.5 18.8 154 137-298 32-219 (347)
315 1zgk_A Kelch-like ECH-associat 96.9 0.11 3.8E-06 40.8 21.2 211 65-303 25-274 (308)
316 3ii7_A Kelch-like protein 7; p 96.8 0.12 4.1E-06 40.5 23.4 221 14-258 11-273 (306)
317 2g8s_A Glucose/sorbosone dehyd 96.6 0.21 7.1E-06 40.2 23.9 63 227-298 271-340 (353)
318 2vpj_A Kelch-like protein 12; 96.5 0.22 7.6E-06 38.8 22.3 178 65-258 63-279 (301)
319 2xn4_A Kelch-like protein 2; s 96.4 0.23 7.7E-06 38.9 18.0 178 65-258 62-277 (302)
320 3ei3_A DNA damage-binding prot 96.4 0.65 2.2E-05 43.8 31.6 90 160-258 809-914 (1158)
321 2xzh_A Clathrin heavy chain 1; 96.4 0.27 9.1E-06 38.9 26.7 185 65-259 78-292 (365)
322 1cru_A Protein (soluble quinop 96.1 0.31 1.1E-05 40.7 15.0 118 178-300 27-163 (454)
323 1zgk_A Kelch-like ECH-associat 96.0 0.39 1.3E-05 37.6 20.2 178 65-258 71-288 (308)
324 2zwa_A Leucine carboxyl methyl 96.0 0.78 2.7E-05 40.8 18.4 195 101-302 400-618 (695)
325 2wg3_C Hedgehog-interacting pr 95.8 0.26 8.9E-06 41.3 13.4 121 179-302 15-160 (463)
326 4asc_A Kelch repeat and BTB do 95.5 0.7 2.4E-05 36.3 16.1 173 101-302 7-207 (315)
327 2uvk_A YJHT; unknown function, 95.4 0.3 1E-05 39.2 12.1 52 200-258 286-343 (357)
328 4asc_A Kelch repeat and BTB do 95.1 0.9 3.1E-05 35.6 17.8 178 65-258 46-278 (315)
329 2be1_A Serine/threonine-protei 95.1 0.14 4.9E-06 40.8 9.0 106 66-174 11-138 (339)
330 3sbq_A Nitrous-oxide reductase 95.0 1.5 5.3E-05 37.4 20.2 78 228-312 324-404 (638)
331 1bpo_A Protein (clathrin); cla 94.9 1.4 4.7E-05 36.5 28.2 187 65-259 77-291 (494)
332 4a0p_A LRP6, LRP-6, low-densit 94.9 1.8 6.3E-05 37.9 29.7 214 23-260 13-240 (628)
333 2woz_A Kelch repeat and BTB do 94.6 1.3 4.5E-05 34.8 15.9 141 101-258 18-185 (318)
334 3s94_A LRP-6, low-density lipo 94.4 2.3 8E-05 37.1 31.3 143 137-298 349-496 (619)
335 2woz_A Kelch repeat and BTB do 94.1 1.7 5.7E-05 34.1 18.2 135 147-302 109-264 (318)
336 2uvk_A YJHT; unknown function, 93.9 2 6.9E-05 34.3 14.9 88 199-300 168-261 (357)
337 2zwa_A Leucine carboxyl methyl 93.6 3.8 0.00013 36.4 20.9 183 65-258 398-636 (695)
338 3sbq_A Nitrous-oxide reductase 93.2 2 6.9E-05 36.7 12.4 117 179-301 324-455 (638)
339 4gq2_M Nucleoporin NUP120; bet 91.6 8 0.00027 35.8 15.5 39 179-217 237-275 (950)
340 3s25_A Hypothetical 7-bladed b 91.6 4 0.00014 31.9 19.0 101 142-258 109-217 (302)
341 3s94_A LRP-6, low-density lipo 91.2 7.1 0.00024 34.1 30.8 191 48-258 349-552 (619)
342 3ott_A Two-component system se 90.7 9 0.00031 34.3 27.9 112 138-253 192-303 (758)
343 1xi4_A Clathrin heavy chain; a 90.6 13 0.00044 36.1 21.6 189 65-260 77-292 (1630)
344 3q6k_A 43.2 kDa salivary prote 89.6 7.3 0.00025 31.6 21.7 190 28-245 124-342 (381)
345 3b7f_A Glycosyl hydrolase, BNR 89.4 7.6 0.00026 31.5 18.5 115 136-251 54-202 (394)
346 3b7f_A Glycosyl hydrolase, BNR 87.7 9.9 0.00034 30.8 14.8 102 149-252 23-142 (394)
347 2be1_A Serine/threonine-protei 87.2 2.6 8.9E-05 33.6 7.7 113 100-218 11-140 (339)
348 2xzh_A Clathrin heavy chain 1; 85.9 12 0.0004 29.8 24.6 203 32-258 92-333 (365)
349 1sqj_A OXG-RCBH, oligoxylogluc 84.5 23 0.00079 32.0 14.7 154 136-299 14-188 (789)
350 3zwu_A Alkaline phosphatase PH 83.6 6.5 0.00022 34.1 8.9 59 180-244 478-548 (592)
351 3ott_A Two-component system se 83.1 25 0.00087 31.4 29.2 222 50-298 193-436 (758)
352 2wg3_C Hedgehog-interacting pr 83.0 20 0.00067 30.0 27.5 30 48-83 14-44 (463)
353 1xi4_A Clathrin heavy chain; a 82.1 40 0.0014 33.0 16.6 158 48-211 151-334 (1630)
354 4a9v_A PHOX; hydrolase, beta-p 82.0 12 0.0004 32.3 9.7 60 179-244 477-548 (592)
355 3s25_A Hypothetical 7-bladed b 80.9 18 0.00061 28.2 16.0 99 143-258 59-177 (302)
356 3ei3_A DNA damage-binding prot 75.8 56 0.0019 31.1 32.4 113 137-256 514-635 (1158)
357 1bpo_A Protein (clathrin); cla 75.6 34 0.0012 28.5 25.4 174 32-211 130-334 (494)
358 4fhn_B Nucleoporin NUP120; pro 75.2 21 0.0007 33.9 10.2 39 179-217 239-277 (1139)
359 4gq2_M Nucleoporin NUP120; bet 73.9 57 0.0019 30.3 14.8 32 228-259 237-268 (950)
360 3f7f_A Nucleoporin NUP120; nuc 71.8 27 0.00091 31.1 9.3 37 179-217 223-259 (729)
361 4a9v_A PHOX; hydrolase, beta-p 71.3 28 0.00097 30.0 9.1 61 227-300 476-550 (592)
362 3uc1_A DNA gyrase subunit A; D 70.3 38 0.0013 26.7 21.1 111 147-258 108-229 (327)
363 3kci_A Probable E3 ubiquitin-p 69.6 43 0.0015 27.1 15.6 74 179-256 106-186 (389)
364 1zi0_A DNA gyrase subunit A; b 68.2 41 0.0014 26.2 21.9 110 147-257 108-226 (307)
365 3zwu_A Alkaline phosphatase PH 67.7 27 0.00091 30.3 8.4 60 228-299 477-549 (592)
366 4fhn_B Nucleoporin NUP120; pro 64.2 14 0.00048 35.0 6.6 23 65-87 249-271 (1139)
367 3no0_A DNA gyrase subunit A; D 63.0 49 0.0017 25.3 17.0 157 138-303 25-188 (276)
368 3uc1_A DNA gyrase subunit A; D 61.1 59 0.002 25.6 21.8 153 98-257 108-279 (327)
369 1suu_A DNA gyrase subunit A; t 57.1 68 0.0023 25.1 23.6 111 147-258 113-232 (312)
370 1suu_A DNA gyrase subunit A; t 55.8 71 0.0024 24.9 22.7 158 139-302 49-222 (312)
371 1sqj_A OXG-RCBH, oligoxylogluc 52.4 1.3E+02 0.0046 27.1 19.6 60 139-198 123-190 (789)
372 3f7f_A Nucleoporin NUP120; nuc 50.2 1.2E+02 0.0041 27.1 9.5 30 228-259 223-252 (729)
373 2cn3_A Xyloglucanase, beta-1,4 49.9 1.4E+02 0.0049 26.6 12.5 120 138-258 24-163 (737)
374 3q6k_A 43.2 kDa salivary prote 48.8 1.1E+02 0.0036 24.9 21.0 177 110-300 124-343 (381)
375 3qhy_B Beta-lactamase inhibito 45.8 98 0.0034 23.6 17.6 174 49-258 25-208 (282)
376 3qhy_B Beta-lactamase inhibito 44.4 1E+02 0.0035 23.5 13.7 127 108-258 41-169 (282)
377 3a0f_A Xyloglucanase; beta-pro 41.2 2E+02 0.0068 25.8 16.2 154 135-298 19-199 (763)
378 1zi0_A DNA gyrase subunit A; b 38.0 1.4E+02 0.0048 23.2 19.6 121 177-302 94-217 (307)
379 3no0_A DNA gyrase subunit A; D 36.8 1.4E+02 0.0048 22.8 18.8 111 147-258 79-197 (276)
380 1wp5_A Topoisomerase IV; broke 36.6 1.5E+02 0.0053 23.2 23.0 109 148-257 106-225 (323)
381 1q47_A Semaphorin 3A; beta pro 31.9 1.9E+02 0.0063 24.5 7.7 27 136-162 461-487 (495)
382 1q47_A Semaphorin 3A; beta pro 30.7 1.3E+02 0.0045 25.4 6.6 28 225-252 460-487 (495)
383 3kci_A Probable E3 ubiquitin-p 29.2 2.2E+02 0.0076 22.8 20.1 150 101-256 64-240 (389)
384 4gz8_A Semaphorin-3A; multi-do 29.1 1.3E+02 0.0046 26.5 6.5 28 225-252 468-495 (667)
385 4gz8_A Semaphorin-3A; multi-do 28.7 2.5E+02 0.0085 24.9 8.1 29 134-162 467-495 (667)
386 3al9_A Plexin-A2; beta-propell 28.1 1.7E+02 0.0057 25.1 6.8 72 229-311 402-476 (539)
387 3l6v_A GYRA, DNA gyrase subuni 26.6 2.5E+02 0.0086 22.6 25.5 61 147-208 112-180 (370)
388 3al9_A Plexin-A2; beta-propell 25.2 2E+02 0.0067 24.7 6.8 68 180-252 402-476 (539)
389 1olz_A Semaphorin 4D; developm 23.9 3.8E+02 0.013 23.7 8.7 58 191-252 417-477 (663)
390 3nvq_A Semaphorin-7A; beta-pro 23.5 3.6E+02 0.012 23.4 8.0 30 135-164 417-446 (590)
391 3nvq_A Semaphorin-7A; beta-pro 22.9 3.8E+02 0.013 23.3 8.1 59 191-252 382-444 (590)
392 4hvt_A Ritya.17583.B, post-pro 22.5 4.1E+02 0.014 23.7 21.9 55 197-258 318-382 (711)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-45 Score=295.28 Aligned_cols=263 Identities=20% Similarity=0.334 Sum_probs=227.0
Q ss_pred CCeEEEEeccCCCceEEEEEeCCC-----------------------C--ceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191 13 GGKVLYTLTNHKSKVMAVKWNGEG-----------------------G--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v~~~~w~~~~-----------------------~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 67 (312)
.|..+..+.+|.+.|++++|+++. + .....+.+|...|.+++|+++ +.+
T Consensus 21 ~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~------~~~ 94 (321)
T 3ow8_A 21 YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT------LPI 94 (321)
T ss_dssp CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS------SSE
T ss_pred hhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC------CCE
Confidence 456667788999999999987631 1 123467899999999999999 899
Q ss_pred EEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191 68 LVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF 139 (312)
Q Consensus 68 l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v 139 (312)
+++++.|++|++||+.+++.. .+....+++++.+|++++.|+.|++|++++.+.. ... ..+...+
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~--~~~-----~~~~~~v 167 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--YSL-----DTRGKFI 167 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE--EEE-----ECSSSCE
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee--EEe-----cCCCceE
Confidence 999999999999999887652 3344566888999999999999999999885432 222 2566789
Q ss_pred eEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191 140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 218 (312)
.+++|+|++++|++++.|+.|++ |+++.+....+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+..
T Consensus 168 ~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~- 246 (321)
T 3ow8_A 168 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG- 246 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-
Confidence 99999999999999999999999 8888888888999999999999999999999999999999999998887776665
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
|...|.+++|+|++++|++++.|+.|++||+.++. ++..+.+|...|.+++|+|++++|+++
T Consensus 247 ------h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~------------~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 247 ------HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT------------CVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp ------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ------CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE------------EEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 88889999999999999999999999999998763 778889999999999999999999999
Q ss_pred ecCCCcccceEEeC
Q psy15191 299 CKATKPEHAAIIIW 312 (312)
Q Consensus 299 s~d~~~~dg~i~iW 312 (312)
+.|+. |+||
T Consensus 309 ~~d~~-----i~vw 317 (321)
T 3ow8_A 309 GDDQE-----IHIY 317 (321)
T ss_dssp ETTCC-----EEEE
T ss_pred eCCCe-----EEEE
Confidence 65555 9998
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-44 Score=300.14 Aligned_cols=259 Identities=21% Similarity=0.303 Sum_probs=226.2
Q ss_pred EEEeccCCCceEEEEE-------------------eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191 17 LYTLTNHKSKVMAVKW-------------------NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA 77 (312)
Q Consensus 17 ~~~~~~h~~~v~~~~w-------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i 77 (312)
...+.+|...|++++| +..+++....+.+|.+.|++++|+|+ +++|++|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~------~~~l~sgs~D~~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS------GKLLASCSADMTI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT------SSEEEEEETTSCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC------CCEEEEEeCCCeE
Confidence 4567789999999885 44557778899999999999999998 8999999999999
Q ss_pred EEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191 78 ILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD 149 (312)
Q Consensus 78 ~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 149 (312)
++||+.+.+.. .+..+.+.+++.++++++.|+.|++||++++. ++..+ .+|...+.++.++|+++
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~-----~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTF-----TGHREWVRMVRPNQDGT 247 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEE-----ECCSSCEEEEEECTTSS
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEE-----eCCCccEEEEEECCCCC
Confidence 99999887652 34455667888899999999999999998844 33333 37888999999999999
Q ss_pred eEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCC--------------------CCEEEEEecCCeEEEEEccC
Q psy15191 150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD--------------------DTHLVSVSRDRRWGLYKRQS 208 (312)
Q Consensus 150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~i~~wd~~~ 208 (312)
++++++.|+.|++ |+.+.+....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999999 88887888888899999999999996 67899999999999999998
Q ss_pred CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe
Q psy15191 209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA 288 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 288 (312)
...+..+.+ |...|++++|+|++++|++|+.||.|++||+..+. ++..+.+|...|++++|
T Consensus 328 ~~~~~~~~~-------h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~------------~~~~~~~h~~~v~~l~~ 388 (410)
T 1vyh_C 328 GMCLMTLVG-------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------CMKTLNAHEHFVTSLDF 388 (410)
T ss_dssp TEEEEEEEC-------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------CCEEEECCSSCEEEEEE
T ss_pred CceEEEEEC-------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------eEEEEcCCCCcEEEEEE
Confidence 888777765 88889999999999999999999999999997653 57788899999999999
Q ss_pred ccCCCeEEEEecCCCcccceEEeC
Q psy15191 289 SHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 289 s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+|++.+|++||.|+ .|+||
T Consensus 389 ~~~~~~l~sgs~D~-----~i~vW 407 (410)
T 1vyh_C 389 HKTAPYVVTGSVDQ-----TVKVW 407 (410)
T ss_dssp CSSSSCEEEEETTS-----EEEEE
T ss_pred cCCCCEEEEEeCCC-----cEEEE
Confidence 99999999995554 59999
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-43 Score=288.77 Aligned_cols=264 Identities=19% Similarity=0.263 Sum_probs=222.0
Q ss_pred CCeEEEEeccCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191 13 GGKVLYTLTNHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 73 (312)
..+...++.+|.+.|++++|+++ +++.+..+..|...|.+++|+|+ +++|++|+.
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~s~~~ 117 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS------GNYVACGGL 117 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT------SSEEEEEET
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC------CCEEEEEeC
Confidence 35677889999999999986654 35667778889999999999999 999999999
Q ss_pred CCcEEEeeecCCcc------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191 74 DKTAILWKYVSEGN------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 74 dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
|+.|++|++.+... ..+....+.+++ .+++++.|+.|++||+.+.+ .... +.+|...|.+
T Consensus 118 d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~--~~~~-----~~~h~~~v~~ 189 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ--QTTT-----FTGHTGDVMS 189 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEE
T ss_pred CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc--EEEE-----EcCCCCceEE
Confidence 99999999976532 012222233333 58999999999999998843 2222 3478899999
Q ss_pred EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
++|+|+++++++|+.|+.|++ |+++......+.+|...|.+++|+|++++|++++.|+.|++||+++.+.+..+....
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~- 268 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN- 268 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-
Confidence 999999999999999999999 888888888888999999999999999999999999999999999877665554211
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
+...|++++|+|++++|++|+.||.|++||+.... .+..+.+|...|.+++|+|+|.+|++||.
T Consensus 269 ----~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 269 ----IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD------------RAGVLAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp ----CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred ----cccceEEEEECCCCCEEEEECCCCeEEEEEcccCc------------EeeEeecCCCcEEEEEEcCCCCEEEEEcC
Confidence 34579999999999999999999999999987763 67788999999999999999999999966
Q ss_pred CCCcccceEEeC
Q psy15191 301 ATKPEHAAIIIW 312 (312)
Q Consensus 301 d~~~~dg~i~iW 312 (312)
|+. |+||
T Consensus 333 D~~-----i~iW 339 (340)
T 1got_B 333 DSF-----LKIW 339 (340)
T ss_dssp TSC-----EEEE
T ss_pred Ccc-----EEec
Confidence 555 9999
No 4
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-43 Score=293.90 Aligned_cols=280 Identities=20% Similarity=0.285 Sum_probs=226.7
Q ss_pred eEeCCCCeEEEEeccCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191 8 VVNGEGGKVLYTLTNHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL 68 (312)
Q Consensus 8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 68 (312)
.|++.+..+..++.+|.+.|++++|+++ +++....+.+|...|.+++|+|+ +++|
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~------g~~l 123 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN------GQSV 123 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT------SSEE
T ss_pred ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC------CCEE
Confidence 4677788899999999999999996554 46677888999999999999999 9999
Q ss_pred EEecCCCcEEEeeecCCcc---------------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191 69 VSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV 132 (312)
Q Consensus 69 ~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 132 (312)
++|+.|+.|++||+..... ..+..+.+.++ +..|++++.|++|++||+.+++.. ........
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~ 201 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFP 201 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSS
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccC
Confidence 9999999999999865321 11222333343 457999999999999999985433 22222233
Q ss_pred CCCccceeEEEECC-CCCeEEEeecCCeEEE-ecc-cCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191 133 GGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVT-TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS 209 (312)
Q Consensus 133 ~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 209 (312)
.+|...|.+++|++ +++++++|+.|+.|++ |++ .......+.+|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 57888999999987 8899999999999999 665 33555667789999999999999999999999999999999998
Q ss_pred CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe----eccCcceeE
Q psy15191 210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL----YGHGYEIYS 285 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~ 285 (312)
..+..+.........+...|++++|+|+|++|++|+.||.|++||+..+. .+..+ .+|.+.|++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~------------~~~~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE------------MVLNLGTLQNSHEGRISC 349 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC------------EEEEECCSCSSCCCCCCE
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc------------eEEEEecccCCCCCceEE
Confidence 88777665433322244568999999999999999999999999987763 33444 579999999
Q ss_pred EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 286 LAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 286 ~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++|+|+|++|++||.|+. |+||
T Consensus 350 l~~s~dg~~l~sgs~D~~-----i~iW 371 (380)
T 3iz6_a 350 LGLSSDGSALCTGSWDKN-----LKIW 371 (380)
T ss_dssp EEECSSSSEEEEECTTSC-----EEEE
T ss_pred EEECCCCCEEEEeeCCCC-----EEEE
Confidence 999999999999955555 9999
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.8e-42 Score=282.51 Aligned_cols=264 Identities=19% Similarity=0.282 Sum_probs=222.6
Q ss_pred CeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD 74 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 74 (312)
.+...++.+|...|++++|++++ ++....+..|...|.+++|+|+ +.+|++|+.|
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~------g~~lasg~~d 127 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS------GCAIACGGLD 127 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT------SSEEEEESTT
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC------CCEEEEeeCC
Confidence 46778899999999999976654 4556677778889999999999 9999999999
Q ss_pred CcEEEeeecCCcc--------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191 75 KTAILWKYVSEGN--------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY 140 (312)
Q Consensus 75 g~i~vw~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~ 140 (312)
+.+++|++..... ..+..+.+.+++..+++++.|++|++||+++.+ .+..+ .+|...|.
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~-----~~h~~~v~ 200 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSF-----HGHGADVL 200 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEE-----ECCSSCEE
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEE-----cCCCCCeE
Confidence 9999999865421 123445567788899999999999999998844 33333 37888999
Q ss_pred EEEECC--CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 141 GCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 141 ~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
+++|+| ++++|++|+.||.|++ |+++.+....+..|...|.+++|+|++++|++++.|+.|++||++.......+..
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~ 280 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK 280 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 999987 5789999999999999 8888888888889999999999999999999999999999999998766655443
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS 297 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 297 (312)
.. +...+.+++|+|++++|++|+.|+.|++||+..+. .+..+.+|...|++++|+|+|++|++
T Consensus 281 ~~-----~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------------~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 281 ES-----IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS------------RVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp TT-----CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS------------EEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred CC-----cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc------------eEEEEECCCCcEEEEEECCCCCEEEE
Confidence 21 34468899999999999999999999999997763 67788899999999999999999999
Q ss_pred EecCCCcccceEEeC
Q psy15191 298 ACKATKPEHAAIIIW 312 (312)
Q Consensus 298 ~s~d~~~~dg~i~iW 312 (312)
|+.|+ .|+||
T Consensus 344 gs~D~-----~v~vW 353 (354)
T 2pbi_B 344 GSWDH-----TLRVW 353 (354)
T ss_dssp EETTS-----EEEEE
T ss_pred EcCCC-----CEEec
Confidence 95555 49999
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-42 Score=277.82 Aligned_cols=239 Identities=16% Similarity=0.175 Sum_probs=203.1
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK 109 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~ 109 (312)
+..++|.+|.+.|++++|+|+ +++|++++.||+|++||+.++... .+....+.+++.+|++++.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~------~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eeEEeecCCCCceEEEEECCC------CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 457789999999999999999 999999999999999999887652 233445567788999999999
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECC
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~ 187 (312)
.|++||+.+++ .+..+ .+|...|.+++|+|++++|++|+.|+.|++ |+++. .+...+.+|...|.+++|+|
T Consensus 78 ~i~vwd~~~~~--~~~~~-----~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 78 RIRVFNYNTGE--KVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EEEEEETTTCC--EEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EEEEEECCCCc--EEEEE-----eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 99999998854 22333 378899999999999999999999999999 66554 44556778999999999999
Q ss_pred -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191 188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDL 264 (312)
Q Consensus 188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 264 (312)
++.+|++|+.|+.|++||++.......+... +...+..++|+| ++++|++|+.|+.|++||++++.
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----- 219 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS----- 219 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSCSEEEECC------CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceeccC------CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-----
Confidence 6789999999999999999877665555432 556788899986 77899999999999999998763
Q ss_pred ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++..+.+|...|.+++|+|++++|++|+.|+. |++|
T Consensus 220 -------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-----i~iW 255 (304)
T 2ynn_A 220 -------CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-----LKIW 255 (304)
T ss_dssp -------EEEEEECCSSCEEEEEECSSSSEEEEEETTSC-----EEEE
T ss_pred -------cceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-----EEEE
Confidence 78889999999999999999999999965555 9998
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.7e-42 Score=275.75 Aligned_cols=243 Identities=21% Similarity=0.314 Sum_probs=205.0
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEe
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCS 106 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~ 106 (312)
+.+...+++|.+.|++++|+|+ -.+++.+|+||+.|++|+||++..+.. ..+....+++++..+++++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~--~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTN--KKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC---------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred hheeeecccCCCcEEEEEEecC--CCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence 5566778899999999999985 012367899999999999999876543 2344455677788999999
Q ss_pred CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191 107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAF 185 (312)
Q Consensus 107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~ 185 (312)
.|+.|++||+.+++ .+... ..+...+.+++|+|++++|++++.++.+++ ++++.+....+..|...|.+++|
T Consensus 100 ~D~~i~lWd~~~~~--~~~~~-----~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 100 LDAHIRLWDLENGK--QIKSI-----DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp TTSEEEEEETTTTE--EEEEE-----ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred CCCcEEEEECCCCC--EEEEE-----eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 99999999998843 33333 256677889999999999999999999999 88888877788888899999999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191 186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV 265 (312)
Q Consensus 186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 265 (312)
+|++++|++++.|+.|++||+++.+.+..+.. |..+|.+++|+|++++|++++.|+.|++||+....
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~------ 239 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEG-------HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN------ 239 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC------
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc------
Confidence 99999999999999999999998887777665 78889999999999999999999999999998763
Q ss_pred cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
....+.+|...|.+++|+|++++|++++.|+. |++|
T Consensus 240 ------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-----v~iw 275 (321)
T 3ow8_A 240 ------LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-----VKVW 275 (321)
T ss_dssp ------EEEEECCCSSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred ------eeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-----EEEE
Confidence 67788999999999999999999999966555 9998
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-41 Score=271.28 Aligned_cols=259 Identities=21% Similarity=0.234 Sum_probs=214.6
Q ss_pred CeEEEEeccCCCceEEEEEeCCCC-------------------------ceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNGEGG-------------------------KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL 68 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~~~~-------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 68 (312)
..+..++.+|.+.|.+++|++..+ .++..+.+|...|.+++|+|+ +++|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d------g~~l 80 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD------GAYA 80 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT------SSEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC------CCEE
Confidence 456678999999999999877542 235578899999999999999 9999
Q ss_pred EEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191 69 VSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY 140 (312)
Q Consensus 69 ~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~ 140 (312)
++|+.|++|++||+.+++.. .+..+.+++++.++++++.|++|++||++.. .+. .+.+|...+.
T Consensus 81 ~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~-----~~~~h~~~v~ 152 (319)
T 3frx_A 81 LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLA-----TLLGHNDWVS 152 (319)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEE-----EECCCSSCEE
T ss_pred EEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEE-----EEeccCCcEE
Confidence 99999999999999887652 3444556788889999999999999999742 222 2347888999
Q ss_pred EEEECCC------CCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191 141 GCKFGPR------GDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS 213 (312)
Q Consensus 141 ~~~~~~~------~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 213 (312)
+++++|. +..+++++.|+.|++ |+++.+....+.+|...|.+++|+|++++|++++.||.|++||+++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999985 448999999999999 888888888888999999999999999999999999999999999888777
Q ss_pred EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe--------eccCcceeE
Q psy15191 214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--------YGHGYEIYS 285 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~ 285 (312)
.+. +...|.+++|+|++.+|++++.+ .+++|++.... .+..+ ..|...+.+
T Consensus 233 ~~~--------~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~v~~ 291 (319)
T 3frx_A 233 TLS--------AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQY------------LVDDLRPEFAGYSKAAEPHAVS 291 (319)
T ss_dssp EEE--------CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEE------------EEEEECCCCTTCCGGGCCCEEE
T ss_pred Eec--------CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCe------------eeeccCccccccccCcCcceeE
Confidence 766 34569999999999999988765 49999987642 12222 245677999
Q ss_pred EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 286 LAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 286 ~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++|+|+|++|++|+.|+. |+||
T Consensus 292 ~~~spdg~~l~sg~~Dg~-----i~vW 313 (319)
T 3frx_A 292 LAWSADGQTLFAGYTDNV-----IRVW 313 (319)
T ss_dssp EEECTTSSEEEEEETTSC-----EEEE
T ss_pred EEECCCCCEEEEeecCce-----EEEE
Confidence 999999999999965555 9999
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=274.82 Aligned_cols=228 Identities=17% Similarity=0.180 Sum_probs=189.5
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------------LPYHMRDDSKQLHLLSCSMDKSIIV 113 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i 113 (312)
|...|.+++|+|+ + .|++|+.||+|+|||+.+++.. .+..+.+++++.+|++++.|++|++
T Consensus 81 ~~~~v~~~~~s~d------~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 81 TEAGVADLTWVGE------R-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV 153 (344)
T ss_dssp ESSCEEEEEEETT------T-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred cCCCEEEEEEeCC------C-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4567999999998 4 6889999999999999887652 3455667889999999999999999
Q ss_pred EcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECC-C
Q psy15191 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSP-D 188 (312)
Q Consensus 114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~-~ 188 (312)
||+++++ .+.. +.+|...|.+++|+|++. +|++++.|+.|++ |+++.+....+. .+...+.+++|+| +
T Consensus 154 wd~~~~~--~~~~-----~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 154 WDLAQQV--VLSS-----YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp EETTTTE--EEEE-----ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred EECCCCc--EEEE-----EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence 9999843 3333 348999999999999885 6789999999999 777777766654 4566799999999 5
Q ss_pred CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191 189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQN 267 (312)
Q Consensus 189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 267 (312)
+++|++|+.||.|++||+++.+.+..+.. |...|++++|+|++ ++|++|+.|+.|+|||+..+
T Consensus 227 ~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-------h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~--------- 290 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLVDTKSTSCVLSSAV-------HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS--------- 290 (344)
T ss_dssp TTEEEEEETTSEEEEEESCC--CCEEEEC-------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---------
T ss_pred CcceEEeccCCcEEEEECCCCcEEEEEcC-------CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---------
Confidence 66889999999999999999888887776 88899999999998 58999999999999999876
Q ss_pred cccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191 268 TLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 268 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.+|.+.|++++|+|+++ +|+++|.|++ |++|
T Consensus 291 ----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~-----v~~w 327 (344)
T 4gqb_B 291 ----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ-----VVHH 327 (344)
T ss_dssp ----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-----EEEE
T ss_pred ----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe-----EEEE
Confidence 4567889999999999999986 5678855555 9998
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.4e-41 Score=268.56 Aligned_cols=255 Identities=15% Similarity=0.185 Sum_probs=211.6
Q ss_pred EEEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191 16 VLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76 (312)
Q Consensus 16 ~~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~ 76 (312)
...++.+|.+.|.+++ |+..+++.+..+..|..+|.+++|+|+ +++|++|+.|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~s~d~~ 78 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR------KNWIIVGSDDFR 78 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG------GTEEEEEETTSE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC------CCEEEEECCCCE
Confidence 4456677777777777 555557788889999999999999999 899999999999
Q ss_pred EEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-C
Q psy15191 77 AILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-R 147 (312)
Q Consensus 77 i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 147 (312)
|++||+.+++.. .+..+.+++++.++++++.|++|++||+++.... ...+.+|...|.+++|+| +
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~------~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL------EQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE------EEEECCCCSCEEEEEECTTC
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch------hhhhcccCCcEEEEEECCCC
Confidence 999999987762 3445566788889999999999999999864211 112347889999999999 6
Q ss_pred CCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 148 GDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
+..|++|+.|+.|++ |+++......+. .|...+..+.|+| ++.+|++++.|+.|++||+++.+.+..+..
T Consensus 153 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~------ 226 (304)
T 2ynn_A 153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG------ 226 (304)
T ss_dssp TTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC------
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC------
Confidence 789999999999999 555544443333 5667899999987 778999999999999999999888887776
Q ss_pred ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC--eEEEEecC
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT--LLASACKA 301 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~s~d 301 (312)
|...|.+++|+|++++|++|+.||.|++||+.+.. .+..+..|...+.+++|+|++. ++++|+.|
T Consensus 227 -h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~ 293 (304)
T 2ynn_A 227 -HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK------------VEKTLNVGLERSWCIATHPTGRKNYIASGFDN 293 (304)
T ss_dssp -CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC------------EEEEECCSSSSEEEEEECTTCGGGCEEEEETT
T ss_pred -CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------eeeeccCCCccEEEEEECCCCCceEEEEecCC
Confidence 88889999999999999999999999999998763 6778888999999999999885 58888433
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=271.23 Aligned_cols=281 Identities=22% Similarity=0.313 Sum_probs=212.1
Q ss_pred CCeEEEEeccCCC-ceEEEEEeCCCC-------------------ceE--E-EEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191 13 GGKVLYTLTNHKS-KVMAVKWNGEGG-------------------KVL--Y-TLTNHKSKVMAVKWVLNTSLDPEHKDLV 69 (312)
Q Consensus 13 ~~~~~~~~~~h~~-~v~~~~w~~~~~-------------------~~~--~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 69 (312)
..+++.++.+|.. .|.+++|++++. +.. . ...+|...|.+++|+|+ +++|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~------g~~l~ 77 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC------GNYLA 77 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT------SSEEE
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC------CCEEE
Confidence 3467788888887 888888877652 211 1 22589999999999999 99999
Q ss_pred EecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191 70 SCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF 139 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v 139 (312)
+|+.|++|++|++..+.. ..+..+.+++++.+|++++.|+.|++||+++...... ...+.+|...|
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~----~~~~~~h~~~v 153 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC----VSVLNSHTQDV 153 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE----EEEECCCCSCE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE----EEEecCcCCCe
Confidence 999999999999877642 2345566788899999999999999999987432211 12234788899
Q ss_pred eEEEECCCCCeEEEeecCCeEEE-ecccCc--eeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE-
Q psy15191 140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV- 215 (312)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~- 215 (312)
.+++|+|++++|++++.|+.|++ |.++.+ ....+.+|...|.+++|+|++++|++++.|+.|++||.........+
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccce
Confidence 99999999999999999999999 554433 33567789999999999999999999999999999997543211000
Q ss_pred --------eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc-eeEEeeccCcceeEE
Q psy15191 216 --------ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP-EVQKLYGHGYEIYSL 286 (312)
Q Consensus 216 --------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~ 286 (312)
.........|...|.+++|+|++.+|++++.|+.|++|+.......... ... ......+|...|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~----~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP----TFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp CC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC----CEEEEEEETTSSSSCEEEE
T ss_pred eeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee----eEEEEeeecccccCcEeEe
Confidence 0000001117778999999999999999999999999998765322110 001 122345899999999
Q ss_pred EeccCC-CeEEEEecCCCcccceEEeC
Q psy15191 287 AASHDG-TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 287 ~~s~~~-~~l~s~s~d~~~~dg~i~iW 312 (312)
+|+|++ .+||+||.|+. |++|
T Consensus 310 ~~~p~~~~~laS~s~Dg~-----v~~W 331 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGE-----VAFW 331 (345)
T ss_dssp EECSSSTTEEEEEETTSC-----EEEE
T ss_pred EEeCCCceEEEEcCCCCc-----EEEE
Confidence 999998 59999965555 9999
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-41 Score=275.75 Aligned_cols=254 Identities=19% Similarity=0.228 Sum_probs=199.4
Q ss_pred eccCCCceEEEEEeCCCCceEE-----------------------------EEccccCcEEEEEEecCcCcCCCCceEEE
Q psy15191 20 LTNHKSKVMAVKWNGEGGKVLY-----------------------------TLTNHKSKVMAVKWVLNTSLDPEHKDLVS 70 (312)
Q Consensus 20 ~~~h~~~v~~~~w~~~~~~~~~-----------------------------~~~~h~~~v~~~~~~~~~~~~~~~~~l~s 70 (312)
..+|...|.+++|+|++..++. ...+|...|++++|+|+ +. +++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d------~~-~l~ 110 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE------KG-ILV 110 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT------TE-EEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC------CC-EEE
Confidence 4568999999999987632221 12357888999999998 64 566
Q ss_pred ecCCCcEEEeeecCCccc------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191 71 CSLDKTAILWKYVSEGNY------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG 138 (312)
Q Consensus 71 ~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 138 (312)
++.||+|+|||+.+++.. .+..+.+++++.+|++++.|+.|++||+++++ .+.. +..|...
T Consensus 111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~-----~~~h~~~ 183 (357)
T 4g56_B 111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKS-----YNAHSSE 183 (357)
T ss_dssp EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSC
T ss_pred EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEE-----EcCCCCC
Confidence 788999999999876542 34455678899999999999999999998843 3333 2478899
Q ss_pred eeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEE
Q psy15191 139 FYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLS 213 (312)
Q Consensus 139 v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~ 213 (312)
|.+++|+|++. .+++++.|+.|++ |+++.+....+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++.+...
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence 99999999875 7889999999999 666655544433 56778999999997 5688899999999999999888877
Q ss_pred EEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-C
Q psy15191 214 LVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-D 291 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 291 (312)
.+.. |...|++++|+|++ ++||+|+.|+.|+|||+..+ .+....+|...|++++|+| +
T Consensus 264 ~~~~-------~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-------------~~~~~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 264 TSAV-------HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-------------EVFRDLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp EECC-------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-------------EEEEECCCSSCEEEEEECSSS
T ss_pred EEec-------cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-------------cEeEECCCCCCEEEEEEeCCC
Confidence 7765 78889999999987 58999999999999999876 3444568999999999998 7
Q ss_pred CCeEEEEecCCCcccceEEeC
Q psy15191 292 GTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 292 ~~~l~s~s~d~~~~dg~i~iW 312 (312)
+.+|+++|.|++ |++|
T Consensus 324 ~~~l~s~s~Dg~-----v~iW 339 (357)
T 4g56_B 324 HSKFTTVGWDHK-----VLHH 339 (357)
T ss_dssp TTEEEEEETTSC-----EEEE
T ss_pred CCEEEEEcCCCe-----EEEE
Confidence 999999966555 9998
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.4e-40 Score=263.84 Aligned_cols=268 Identities=23% Similarity=0.358 Sum_probs=220.0
Q ss_pred CCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191 13 GGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 73 (312)
......++.+|...|.+++|++++ ++....+.+|...|.+++|+|+ +++|++|+.
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~ 85 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD------SNLLVSASD 85 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEET
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC------CCEEEEECC
Confidence 467788899999999999966543 5667788899999999999999 899999999
Q ss_pred CCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191 74 DKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG 145 (312)
Q Consensus 74 dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (312)
|+.|++||+.+++.. .+....+++++.++++++.|+.|++||+++.+. ... +..|..++.+++|+
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~-----~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKT-----LPAHSDPVSAVHFN 158 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--EEE-----ECCCSSCEEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--EEE-----ecCCCCcEEEEEEc
Confidence 999999999887652 234455678888999999999999999987442 222 24678899999999
Q ss_pred CCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
|+++++++++.|+.|++ |+++.+....+. .+...+..++|+|++++|++++.|+.|++||+++.+.+..+......
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-- 236 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE-- 236 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS--
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc--
Confidence 99999999999999999 777776665553 56678999999999999999999999999999988777766653211
Q ss_pred ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
...+......+++.+|++|+.||.|++||+..+. .+..+.+|...|.+++|+|++++|++++.
T Consensus 237 --~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~--- 299 (312)
T 4ery_A 237 --KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE------------IVQKLQGHTDVVISTACHPTENIIASAAL--- 299 (312)
T ss_dssp --SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECSSSSEEEEEEC---
T ss_pred --eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch------------hhhhhhccCCcEEEEeecCcCCceEEEEc---
Confidence 1112233344688999999999999999998763 67888999999999999999999999963
Q ss_pred cccceEEeC
Q psy15191 304 PEHAAIIIW 312 (312)
Q Consensus 304 ~~dg~i~iW 312 (312)
+.|+.|++|
T Consensus 300 ~~d~~i~~W 308 (312)
T 4ery_A 300 ENDKTIKLW 308 (312)
T ss_dssp TTTCCEEEE
T ss_pred cCCccEEEe
Confidence 245669999
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-41 Score=280.08 Aligned_cols=236 Identities=20% Similarity=0.322 Sum_probs=208.1
Q ss_pred EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcE
Q psy15191 40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSI 111 (312)
Q Consensus 40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i 111 (312)
...+.+|..+|++++|+|+ +.+|++|+.||+|++||+.+++.. .+..+.+++++.+|++|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~------~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPV------FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSS------SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred eEeecccCCcEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 4578899999999999999 899999999999999999887652 34445567888899999999999
Q ss_pred EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT 190 (312)
Q Consensus 112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (312)
++||+.+.+ .+. .+.+|...|.+++|+|+++++++++.|+.|++ |+++......+.+|...|.++.++|++.
T Consensus 175 ~iwd~~~~~--~~~-----~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 175 KLWDFQGFE--CIR-----TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp CEEETTSSC--EEE-----CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEEeCCCCc--eeE-----EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence 999998743 222 33478899999999999999999999999999 8888888888889999999999999999
Q ss_pred EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC--------------------CceEEEeccCCeE
Q psy15191 191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD--------------------SRYFLTISRDGVC 250 (312)
Q Consensus 191 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~s~~~dg~i 250 (312)
+|++++.|+.|++||+++......+.. |...|.+++|+|+ +.+|++|+.|+.|
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECKAELRE-------HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred EEEEEcCCCeEEEEECCCCceeeEecC-------CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 999999999999999998887776655 8888999999996 6789999999999
Q ss_pred EEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++||+..+. ++..+.+|...|++++|+|+|++|++|+.| |.|++|
T Consensus 321 ~iwd~~~~~------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~i~vw 365 (410)
T 1vyh_C 321 KMWDVSTGM------------CLMTLVGHDNWVRGVLFHSGGKFILSCADD-----KTLRVW 365 (410)
T ss_dssp EEEETTTTE------------EEEEEECCSSCEEEEEECSSSSCEEEEETT-----TEEEEE
T ss_pred EEEECCCCc------------eEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEE
Confidence 999998763 678889999999999999999999999554 559998
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-40 Score=290.37 Aligned_cols=282 Identities=17% Similarity=0.216 Sum_probs=223.4
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG 86 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 86 (312)
.+-..++|+.+..-.+. ....|+..+++....+.+|...|++++|+|+ |++||+|+.|++|+|||+.+++
T Consensus 23 ~~~~spdg~~l~~~~~~----~v~l~~~~~~~~~~~~~~h~~~v~~~~~spd------g~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGT----SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS------GYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp CCEECTTSSEEEEEETT----EEEEEETTCSSCCEEECCCSSCEEEEEECTT------SSEEEEEETTSEEEEEESSSTT
T ss_pred EEeeCCCCCEEEeCCCC----EEEEecCCCcccCeEecCCCCceEEEEECCC------CcEEEEEeCCCCEEEeECCCCc
Confidence 34445667777665432 2244999999999999999999999999999 9999999999999999986543
Q ss_pred c----------cccccccCCCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC-eE
Q psy15191 87 N----------YLPYHMRDDSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD-YI 151 (312)
Q Consensus 87 ~----------~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 151 (312)
. ..+..+.+++++..|++++.+ +.|++||... . ...+.+|...|.+++|+|++. .|
T Consensus 93 ~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~-------~~~l~gh~~~v~~v~f~p~~~~~l 163 (611)
T 1nr0_A 93 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S-------NGNLTGQARAMNSVDFKPSRPFRI 163 (611)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B-------CBCCCCCSSCEEEEEECSSSSCEE
T ss_pred ceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C-------cceecCCCCCceEEEECCCCCeEE
Confidence 2 134456678889899988865 4788888543 1 123458999999999999987 59
Q ss_pred EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeE
Q psy15191 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW 230 (312)
Q Consensus 152 ~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~ 230 (312)
++++.|+.+++ |..+.+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.........|...|.
T Consensus 164 ~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 164 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 99999999999 77777777888899999999999999999999999999999999988877665322111223889999
Q ss_pred EEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc-------------------------------ccccceeEEeecc
Q psy15191 231 GVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ-------------------------------NTLWPEVQKLYGH 279 (312)
Q Consensus 231 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~ 279 (312)
+++|+|++++|++++.|+.|++||+.++.....+.. ....+....+.+|
T Consensus 244 ~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh 323 (611)
T 1nr0_A 244 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH 323 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence 999999999999999999999999987532211100 0001134566789
Q ss_pred CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...|++++|+|+|++|++++.|+. |++|
T Consensus 324 ~~~v~~l~~spdg~~l~s~s~D~~-----v~~W 351 (611)
T 1nr0_A 324 NKAITALSSSADGKTLFSADAEGH-----INSW 351 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCc-----EEEE
Confidence 999999999999999999966555 9998
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-40 Score=291.50 Aligned_cols=278 Identities=21% Similarity=0.294 Sum_probs=215.9
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEc-------cccCcEEEEEEecCcC
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLT-------NHKSKVMAVKWVLNTS 60 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~-------~h~~~v~~~~~~~~~~ 60 (312)
++|+..+++++.++.+|...|.+++|++++ ++.+..+. +|.+.|++++|+|+
T Consensus 173 ~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-- 250 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-- 250 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT--
T ss_pred EEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC--
Confidence 578989999999999999999999976654 45556663 79999999999999
Q ss_pred cCCCCceEEEecCCCcEEEeeecCCccc---------------------------------------------------c
Q psy15191 61 LDPEHKDLVSCSLDKTAILWKYVSEGNY---------------------------------------------------L 89 (312)
Q Consensus 61 ~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------------------------------------------------~ 89 (312)
+++|++++.|++|++||+.+++.. .
T Consensus 251 ----g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 251 ----GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp ----SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred ----CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence 999999999999999998865431 1
Q ss_pred cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeee---------e-----------------ee--------------
Q psy15191 90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET---------A-----------------RV-------------- 129 (312)
Q Consensus 90 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~-----------------~~-------------- 129 (312)
+..+.+++++.+|++++.|++|++||+.+++...... . +.
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 2234457888999999999999999988643211100 0 00
Q ss_pred ------------------------------------cccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce--e
Q psy15191 130 ------------------------------------GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--I 170 (312)
Q Consensus 130 ------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~ 170 (312)
..+ .+...+.+++|+|++++|++|+.|+.|++ |+.+... .
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~ 485 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV 485 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeee
Confidence 000 12345788999999999999999999999 4443322 1
Q ss_pred eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191 171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC 250 (312)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 250 (312)
.. .+|...|++++|+||+++|++++.|+.|++||+.+....... .....|...|++++|+|++++||+|+.|+.|
T Consensus 486 ~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~----~~~~~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 486 KT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT----NSWTFHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC----CCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee----eeeeecccceeEEEECCCCCEEEEEECCCcE
Confidence 22 479999999999999999999999999999999863322110 0011288899999999999999999999999
Q ss_pred EEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 251 VVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++||+..+... .+..+.+| ...|++++|+|+++ |++++.|++ |++|
T Consensus 561 ~lW~~~~~~~~----------~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~-----i~lW 607 (611)
T 1nr0_A 561 IVWNMNKPSDH----------PIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSN-----IKFW 607 (611)
T ss_dssp EEEETTCTTSC----------CEEETTSSTTSCEEEEEEEETTE-EEEEETTSC-----EEEE
T ss_pred EEEECCCcccc----------cchhhccCcccCeeEEEEcCCCE-EEEecCCCC-----EEEE
Confidence 99999875321 22556789 89999999999998 999955555 9999
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.2e-40 Score=284.93 Aligned_cols=264 Identities=29% Similarity=0.434 Sum_probs=221.6
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL 68 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 68 (312)
++|+. +++.+..+.+|...|.+++|+++. ++.+..+.+|...|.+++|+|+ +++|
T Consensus 287 ~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~------g~~l 359 (577)
T 2ymu_A 287 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPD------GQTI 359 (577)
T ss_dssp EEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT------SSEE
T ss_pred EEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCC------CCEE
Confidence 46774 477888899999999999877654 3445677889999999999999 9999
Q ss_pred EEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191 69 VSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 69 ~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
++++.|+.|++||...... ..+..+.+++++.+|++++.|+.|++||... ..+.. +.+|...|.+
T Consensus 360 ~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~-----~~~~~~~v~~ 431 (577)
T 2ymu_A 360 ASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQT-----LTGHSSSVWG 431 (577)
T ss_dssp EEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEE-----EECCSSCEEE
T ss_pred EEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEE-----ecCCCCCeEE
Confidence 9999999999999643321 2344455678889999999999999999653 22222 2378889999
Q ss_pred EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
++|+|++++|++++.|+.+++ |. +.+....+.+|...|.+++|+|++++|++++.|+.|++||. +.+.+..+..
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~--- 506 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--- 506 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC---
T ss_pred EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC---
Confidence 999999999999999999999 53 44566677789999999999999999999999999999996 4666666665
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
|...|++++|+|++++||+++.||.|++||.... ++..+.+|.+.|++++|+|||++|+|++.
T Consensus 507 ----h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~-------------~~~~~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 507 ----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-------------LLQTLTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp ----CSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC-------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred ----CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC-------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 8889999999999999999999999999996432 78889999999999999999999999955
Q ss_pred CCCcccceEEeC
Q psy15191 301 ATKPEHAAIIIW 312 (312)
Q Consensus 301 d~~~~dg~i~iW 312 (312)
|+. |++|
T Consensus 570 D~~-----i~~W 576 (577)
T 2ymu_A 570 DKT-----VKLW 576 (577)
T ss_dssp TSC-----EEEE
T ss_pred CCE-----EEEe
Confidence 554 9999
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=269.81 Aligned_cols=254 Identities=19% Similarity=0.322 Sum_probs=204.7
Q ss_pred CCceEEEEccccC-cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------cccccccCCCCCceEE
Q psy15191 36 GGKVLYTLTNHKS-KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------YLPYHMRDDSKQLHLL 103 (312)
Q Consensus 36 ~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~~~~~l~ 103 (312)
..+++.++.+|.. .|++++|+|+ +++||+|+.|++|+|||+..+.. ..+..+.+++++.+|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~------g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 77 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPA------GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA 77 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTT------SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE
T ss_pred cEEEeeeecCCCCCcEEEEEECCC------CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE
Confidence 3457889999988 9999999999 99999999999999999987642 1345566788899999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc---eeeeecccCCc
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK---QIQTLPCHQLT 179 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~---~~~~~~~~~~~ 179 (312)
+++.|+.+++|++.......... +.+|...|.+++|+|++++|++++.|+.|++ |+.+.+ ....+.+|...
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~-----~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTT-----LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred EEECCCcEEEEEccCCCeEEEEE-----ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 99999999999988754333333 3489999999999999999999999999999 554432 34456689999
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeE--EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL--SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 257 (312)
|.+++|+|++++|++++.|+.|++||.+..... ..+.. |...|++++|+|++++|++++.|+.|++||...
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-------h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG-------HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecC-------CCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 999999999999999999999999999876533 23333 888999999999999999999999999999755
Q ss_pred CCCCcccc---cccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 258 PPTEEDLV---QNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 258 ~~~~~~~~---~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+....... ....|+++..+.+ |...|++++|+|++..|++++.|+. |++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-----i~vw 279 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-----IRVF 279 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-----EEEE
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-----EEEE
Confidence 43222111 1223445666666 8899999999999999999966555 9988
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-39 Score=266.09 Aligned_cols=271 Identities=17% Similarity=0.209 Sum_probs=206.1
Q ss_pred eEEEEeccCCCceEEEEE-----eC-CC--------------------------CceEEEEccccCcEEEEEEecCcCcC
Q psy15191 15 KVLYTLTNHKSKVMAVKW-----NG-EG--------------------------GKVLYTLTNHKSKVMAVKWVLNTSLD 62 (312)
Q Consensus 15 ~~~~~~~~h~~~v~~~~w-----~~-~~--------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~ 62 (312)
++..++.+|.+.|++++| ++ ++ +.+...+.+|...|++++|+|+
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~---- 87 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE---- 87 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS----
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC----
Confidence 456678888888888877 43 21 1245567899999999999999
Q ss_pred CCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC
Q psy15191 63 PEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG 134 (312)
Q Consensus 63 ~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 134 (312)
+.+|++|+.|++|++||+.+++.. .+..+.+++++.+|++++.|+.|++||+.... .........
T Consensus 88 --~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~~~ 160 (343)
T 2xzm_R 88 --NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-----KFSSAEKEN 160 (343)
T ss_dssp --TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-----EEECCTTTS
T ss_pred --CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-----eeeeecccC
Confidence 899999999999999999887652 34456678889999999999999999997421 111222346
Q ss_pred CccceeEEEECCCC----------CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEE
Q psy15191 135 NTLGFYGCKFGPRG----------DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL 203 (312)
Q Consensus 135 ~~~~v~~~~~~~~~----------~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 203 (312)
|...+.+++|+|++ .++++++.|+.|++ | .+.+....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI 239 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence 78889999999987 78999999999999 5 334455566789999999999999999999999999999
Q ss_pred EEccCCC-eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc--ccccccccceeEEeeccC
Q psy15191 204 YKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE--DLVQNTLWPEVQKLYGHG 280 (312)
Q Consensus 204 wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~ 280 (312)
||+.... ....+. +...|.+++|+|++++++++ .|+.|++||+.+..... .+..... .......+|.
T Consensus 240 wd~~~~~~~~~~~~--------~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 309 (343)
T 2xzm_R 240 WDILNLTYPQREFD--------AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPI-TKAEGQKGKN 309 (343)
T ss_dssp EESSCCSSCSEEEE--------CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSG-GGBTTBCCSC
T ss_pred EECCCCcccceeec--------CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcc-hhhhhhcCCC
Confidence 9995433 333332 44569999999999887755 57789999998764321 0000000 0011123688
Q ss_pred cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 281 ~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
..|++++|+|+|++|++|+ .||.|++|
T Consensus 310 ~~v~~~~~sp~g~~l~sg~-----~Dg~v~~w 336 (343)
T 2xzm_R 310 PQCTSLAWNALGKKLFAGF-----TDGVIRTF 336 (343)
T ss_dssp CCEEEEEECSSSCCEEEEE-----TTSEEEEE
T ss_pred CceEEEEECCCCCeEEEec-----CCceEEEE
Confidence 8999999999999999995 45559998
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-40 Score=265.35 Aligned_cols=275 Identities=19% Similarity=0.297 Sum_probs=203.1
Q ss_pred CCeEEEEeccCCCceEEEEEeC-----------------CCC--ceEEEE-cc-ccCcEEEEEEecCcCcCCCCceEEEe
Q psy15191 13 GGKVLYTLTNHKSKVMAVKWNG-----------------EGG--KVLYTL-TN-HKSKVMAVKWVLNTSLDPEHKDLVSC 71 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v~~~~w~~-----------------~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~~~~~~~l~s~ 71 (312)
+.+++.++.+|++.|.++.|++ ..+ +.+..+ .+ |...|++++|+|+ +++|++|
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~------~~~las~ 76 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH------TSLLAAG 76 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT------SSEEEEE
T ss_pred ccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC------CCEEEEE
Confidence 4567888999999999888554 332 344555 44 9999999999999 8999999
Q ss_pred cCCCcEEEeeecCCc-------c--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191 72 SLDKTAILWKYVSEG-------N--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT 136 (312)
Q Consensus 72 ~~dg~i~vw~~~~~~-------~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 136 (312)
+.|++|++||+.... . ..+..+.+++++.+|++++.|++|++||++...... .....+.+|.
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~---~~~~~~~~h~ 153 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY---ECISVLQEHS 153 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC---EEEEEECCCS
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe---EEEEEeccCC
Confidence 999999999985321 1 234556678889999999999999999995422110 1112234788
Q ss_pred cceeEEEECCCCCeEEEeecCCeEEE-ecccC--ceeeeecccCCceeEEEECCC--CCEEEEEecCCeEEEEEccCCCe
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW--KQIQTLPCHQLTITQLAFSPD--DTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
..|.+++|+|++++|++++.|+.|++ |..+. +....+.+|...|.+++|+|+ +.+|++++.|++|++||++....
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 99999999999999999999999999 44332 455667799999999999998 67899999999999999875421
Q ss_pred --EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE-EeeccCc-ceeEEE
Q psy15191 212 --LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYGHGY-EIYSLA 287 (312)
Q Consensus 212 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~v~~~~ 287 (312)
.............|...|.+++|++++ +|++++.||.|++||...+. |+... .+.+|.. .|.+++
T Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~----------~~~~~~~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE----------WKVFAKRALCHGVYEINVVK 302 (330)
T ss_dssp TSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE----------EEEEEEESCTTTTSCEEEEE
T ss_pred cccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc----------eEEEeccccccccceEEEEE
Confidence 000000000011177889999999765 89999999999999986541 11222 3357877 899999
Q ss_pred ecc--CCCeEEEEecCCCcccceEEeC
Q psy15191 288 ASH--DGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 288 ~s~--~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+| ++++|++|+.| |.|+||
T Consensus 303 ~~~~~~~~~las~s~D-----g~v~~W 324 (330)
T 2hes_X 303 WLELNGKTILATGGDD-----GIVNFW 324 (330)
T ss_dssp EC-----CCEEEEETT-----SEEEEE
T ss_pred EecCCCceEEEEecCC-----CcEEEE
Confidence 999 78999999554 559998
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-39 Score=265.19 Aligned_cols=242 Identities=20% Similarity=0.247 Sum_probs=204.9
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d 108 (312)
.+...++.+|.+.|++++|+|+ +++|++|+.||+|++||+.++... .+..+.+++++.++++++.|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d------~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTD------SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred chhheeecCCCCceEEEEECCC------CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 4667899999999999999999 999999999999999999877652 23445567888999999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~ 187 (312)
+.|++|++.+.+.... ....+.+|...+.++.|++++. +++++.|+.|++ |+++.+....+.+|...|.+++|+|
T Consensus 119 ~~v~iw~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 119 NICSIYNLKTREGNVR---VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp CEEEEEETTTCSBSCE---EEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CeEEEEECccCCCcce---eEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 9999999987543211 1122347889999999998875 889999999999 8888888888889999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN 267 (312)
Q Consensus 188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 267 (312)
++++|++++.|+.|++||+++......+.. |...|++++|+|++++|++|+.||.|++||++...
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-------- 259 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-------- 259 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcC-------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------
Confidence 999999999999999999998888777665 88889999999999999999999999999998762
Q ss_pred cccceeEEee--ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 268 TLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 268 ~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+. .+...|++++|+|+|++|++|+.| |.|++|
T Consensus 260 ----~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----~~i~vw 297 (340)
T 1got_B 260 ----ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----FNCNVW 297 (340)
T ss_dssp ----EEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred ----EEEEEccCCcccceEEEEECCCCCEEEEECCC-----CeEEEE
Confidence 333333 234579999999999999999554 559998
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-39 Score=265.66 Aligned_cols=260 Identities=22% Similarity=0.305 Sum_probs=201.9
Q ss_pred cCCCceEEEEEeCCC------------------CceEEEEccccC------------------cEEEEEEecCcCcCCCC
Q psy15191 22 NHKSKVMAVKWNGEG------------------GKVLYTLTNHKS------------------KVMAVKWVLNTSLDPEH 65 (312)
Q Consensus 22 ~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~------------------~v~~~~~~~~~~~~~~~ 65 (312)
+|...|.+++|++++ ++.+..+.+|.. .|++++|+|+ +
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d------g 135 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD------G 135 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT------S
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC------C
Confidence 588888888877654 444555555432 3899999999 9
Q ss_pred ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 137 (312)
++|++|+.|+.|++||+.+++.. .+..+.+.+++.+|++++.|++|++||+++.+. ..... +..
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~------~~~ 207 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLS------IED 207 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEE------CSS
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEEE------cCC
Confidence 99999999999999999887652 344556678888999999999999999988542 22222 345
Q ss_pred ceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeee-------cccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191 138 GFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTL-------PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208 (312)
Q Consensus 138 ~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 208 (312)
.+.+++|+| +++++++++.|+.|++ |.++......+ .+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 689999999 8999999999999999 77766666555 47899999999999999999999999999999986
Q ss_pred CCeEEEEeccC-----CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcce
Q psy15191 209 SGRLSLVACSD-----KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEI 283 (312)
Q Consensus 209 ~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 283 (312)
........... .....|...|.+++|+|++++|++|+.|+.|++||+.++. ++..+.+|...|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~------------~~~~l~~h~~~v 355 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN------------PLLMLQGHRNSV 355 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC------------EEEEEECCSSCE
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe------------EEEEECCCCCCE
Confidence 43221110000 0011177889999999999999999999999999998763 678889999999
Q ss_pred eEEEecc------CCCeEEEEecCCCcccceEEeC
Q psy15191 284 YSLAASH------DGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 284 ~~~~~s~------~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+++|++ ++++|++|+. ||.|+||
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs~-----Dg~i~iW 385 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGSG-----DCKARIW 385 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEET-----TSEEEEE
T ss_pred EEEEecCCcCcCCCCCEEEEECC-----CCcEEEC
Confidence 9999886 6889999955 5559999
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.4e-39 Score=262.21 Aligned_cols=273 Identities=19% Similarity=0.171 Sum_probs=215.0
Q ss_pred CCCCeEEEEeccCCCceEEEEEeCCCCc-------------------------eEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191 11 GEGGKVLYTLTNHKSKVMAVKWNGEGGK-------------------------VLYTLTNHKSKVMAVKWVLNTSLDPEH 65 (312)
Q Consensus 11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~-------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~ 65 (312)
.+..++..+|+||++.|++++|+|+.++ +...+.+|...|.+++|+|+ +
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d------g 98 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD------G 98 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT------S
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC------C
Confidence 3445567789999999999998886432 34567889999999999999 9
Q ss_pred ceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 137 (312)
++|++++.|+.|++|+....... ........+.+..+++++.|+.+++||+..... ......+|..
T Consensus 99 ~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~------~~~~~~~~~~ 172 (340)
T 4aow_A 99 QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK------YTVQDESHSE 172 (340)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------EEECSSSCSS
T ss_pred CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce------EEEEeccccC
Confidence 99999999999999998876652 222333456777999999999999999876322 1222346788
Q ss_pred ceeEEEECCCC--CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191 138 GFYGCKFGPRG--DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL 214 (312)
Q Consensus 138 ~v~~~~~~~~~--~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 214 (312)
.+..++|++++ .++++++.|+.|++ |.++.+....+.+|...|++++|+|++++|++++.|+.|++||+++.+.+..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 89999998865 56788999999999 8888888888999999999999999999999999999999999998888777
Q ss_pred EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCe
Q psy15191 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL 294 (312)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 294 (312)
+. +...|.+++|+|++. +++++.|+.|++||++.......+.. ........+|...|++++|+|+|++
T Consensus 253 ~~--------~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 253 LD--------GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQ---EVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp EE--------CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECC---C-------CCCCCEEEEEECTTSSE
T ss_pred ec--------CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccc---cceeeeccCCCCCEEEEEECCCCCE
Confidence 66 456799999999876 45566799999999986532111100 0122334578999999999999999
Q ss_pred EEEEecCCCcccceEEeC
Q psy15191 295 LASACKATKPEHAAIIIW 312 (312)
Q Consensus 295 l~s~s~d~~~~dg~i~iW 312 (312)
|++|+.|+. |+||
T Consensus 321 l~sgs~Dg~-----v~iW 333 (340)
T 4aow_A 321 LFAGYTDNL-----VRVW 333 (340)
T ss_dssp EEEEETTSC-----EEEE
T ss_pred EEEEeCCCE-----EEEE
Confidence 999965555 9999
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.4e-39 Score=258.94 Aligned_cols=241 Identities=17% Similarity=0.297 Sum_probs=189.5
Q ss_pred EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCC--CCceEEEEeC
Q psy15191 40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDS--KQLHLLSCSM 107 (312)
Q Consensus 40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~--~~~~l~~~~~ 107 (312)
+..+.+|.+.|++++|+|+ |++||+|+.|++|+|||+.... . ..+..+.+.+ ++.+|++++.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~------g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYY------GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp CEECCSCSSCEEEEEECTT------SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ceeccCCcCceEEEEECCC------CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC
Confidence 3567899999999999999 9999999999999999997532 1 1233334433 3679999999
Q ss_pred CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCce--eeeecccCCceeE
Q psy15191 108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWKQ--IQTLPCHQLTITQ 182 (312)
Q Consensus 108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~--~~~~~~~~~~v~~ 182 (312)
|++|++||+++++...... +..|...|.+++|+|+ +.+|++++.|+.|++ |+++... ...+.+|...|.+
T Consensus 76 D~~v~iWd~~~~~~~~~~~-----~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred CCEEEEEEcCCCceEEEEE-----eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccce
Confidence 9999999998743222222 2468889999999997 889999999999999 5554321 2345589999999
Q ss_pred EEECCC-------------CCEEEEEecCCeEEEEEccCCCe----EEEEeccCCCCcccceeeEEEEEcCCC---ceEE
Q psy15191 183 LAFSPD-------------DTHLVSVSRDRRWGLYKRQSSGR----LSLVACSDKTNGVHKRIIWGVAWSHDS---RYFL 242 (312)
Q Consensus 183 ~~~~~~-------------~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~ 242 (312)
++|+|+ +++|++|+.|+.|++||+++... ...+.. |...|.+++|+|++ ++|+
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-------H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-------HSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-------CSSCEEEEEECCCCSSSEEEE
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-------CCCceEEEEECCCCCCceEEE
Confidence 999997 57999999999999999987652 223333 88899999999985 8999
Q ss_pred EeccCCeEEEEecCCCCCCcccccccccceeEEe--eccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++.|+.|++||+....... ....+ ..|...|.+++|+|+|++||+++.|+. |+||
T Consensus 224 s~s~D~~v~iWd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~-----v~lw 281 (297)
T 2pm7_B 224 SVSQDRTCIIWTQDNEQGPW---------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-----VTLW 281 (297)
T ss_dssp EEETTSCEEEEEESSTTSCC---------EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-----EEEE
T ss_pred EEECCCcEEEEEeCCCCCcc---------ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-----EEEE
Confidence 99999999999997642110 11222 467889999999999999999965555 9998
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.6e-39 Score=278.49 Aligned_cols=264 Identities=30% Similarity=0.442 Sum_probs=222.8
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCC------------------CceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL 68 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 68 (312)
++|+. +++.+..+.+|...|.+++|++++ ++.+..+.+|...|++++|+|+ +++|
T Consensus 246 ~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l 318 (577)
T 2ymu_A 246 KLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD------GQTI 318 (577)
T ss_dssp EEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT------SSEE
T ss_pred EEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCC------CCEE
Confidence 46774 578889999999999999977654 4556778899999999999999 8999
Q ss_pred EEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191 69 VSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 69 ~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
++++.|+.|++||...... ..+....+++++.++++++.|+.|++||... ..+... ..|...|.+
T Consensus 319 ~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~---~~~~~~-----~~~~~~v~~ 390 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTL-----TGHSSSVRG 390 (577)
T ss_dssp EEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---CEEEEE-----ECCSSCEEE
T ss_pred EEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC---CEEEEe-----cCCCCCeEE
Confidence 9999999999999876543 2334455678889999999999999999653 222222 368889999
Q ss_pred EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
++|+|++++|++++.|+.|++ | .+.+....+.+|...|.+++|+|++++|++++.|+.|++||.. .+.+..+..
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~--- 465 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTG--- 465 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC-TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEEC---
T ss_pred EEECCCCCEEEEEeCCCEEEEEe-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcC---
Confidence 999999999999999999999 4 3456666777899999999999999999999999999999975 555555554
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
|...|++++|+|++++|++++.|+.|++||.... ++..+.+|...|++++|+|+|++|++++.
T Consensus 466 ----~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~-------------~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 466 ----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-------------LLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp ----CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC-------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred ----CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC-------------EEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 7888999999999999999999999999996432 67889999999999999999999999954
Q ss_pred CCCcccceEEeC
Q psy15191 301 ATKPEHAAIIIW 312 (312)
Q Consensus 301 d~~~~dg~i~iW 312 (312)
||.|+||
T Consensus 529 -----dg~v~lw 535 (577)
T 2ymu_A 529 -----DKTVKLW 535 (577)
T ss_dssp -----TSEEEEE
T ss_pred -----cCEEEEE
Confidence 5559998
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-40 Score=272.70 Aligned_cols=251 Identities=20% Similarity=0.223 Sum_probs=205.2
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~ 103 (312)
|++....+.+++.+|.+.|++++|+|+ +++|+||+.||+|+|||+.+++.. .+..+.+++++.+++
T Consensus 51 ~~~~~~~~~~~l~gH~~~V~~~~~sp~------~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 51 FNPTDLVCCRTLQGHSGKVYSLDWTPE------KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp CCCCCCEEEEEECCCSSCEEEEEECTT------SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccceeEEeecccccccEEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 888888999999999999999999999 899999999999999999887652 344556788999999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeee-----ccc
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTL-----PCH 176 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~-----~~~ 176 (312)
+++.|+.+++|++.+.............+.+|...+.++.|.|+ +..|++|+.|+.|++ |+++.+....+ .+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999997632211111112234588899999999996 456999999999999 77766666555 478
Q ss_pred CCceeEEEECC-CCCEEEEEecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 177 QLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 177 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
...|.+++|+| ++++|++|+.|+.|++||++. ......+.+ |...|++++|+|++++|++|+.||.|++||
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG-------HEGDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC-------CSSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC-------cCCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 99999999987 889999999999999999984 355555554 888999999999999999999999999999
Q ss_pred cCCCCCCcccccccccceeEEeecc-------CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYGH-------GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+..+. .+..+..+ ...|++++|+|+|++|++|+.|+. |++|
T Consensus 278 ~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-----i~vw 325 (380)
T 3iz6_a 278 MRTGH------------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-----CYVW 325 (380)
T ss_dssp TTTTE------------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-----EEEE
T ss_pred CCCCc------------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-----EEEE
Confidence 98863 33333332 235899999999999999955554 9998
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-39 Score=263.31 Aligned_cols=245 Identities=20% Similarity=0.259 Sum_probs=205.4
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d 108 (312)
.+...++.+|.+.|++++|+|+ +++|+||+.||+|++||..++... .+..+.++|++..+++++.|
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d------~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKD------KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred cEEEEEecCCCCeEEEEEECCC------CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 4567899999999999999999 899999999999999998776652 34456678899999999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~ 187 (312)
+.+++|++......... .....+..|...|.+++|+|++..|++++.|+.|++ |+++.+....+.+|...|.+++|+|
T Consensus 128 ~~i~v~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMA-AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp SEEEEEECCCCTTCCSG-GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred CCEEEEEEecccccccc-ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 99999998753221110 111223468889999999999999999999999999 8888888888999999999999988
Q ss_pred --CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191 188 --DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV 265 (312)
Q Consensus 188 --~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 265 (312)
++++|++++.||.|++||+++.+....+.. |...|++++|+|++++|++++.|+.|++||++...
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~------ 273 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-------HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR------ 273 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc------
Confidence 578999999999999999999888777665 88899999999999999999999999999998752
Q ss_pred cccccceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 266 QNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 266 ~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.. +...+.+++|+|+|++|++|+.|+. |++|
T Consensus 274 ------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-----i~vw 311 (354)
T 2pbi_B 274 ------EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-----INVW 311 (354)
T ss_dssp ------EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred ------EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-----EEEE
Confidence 3333332 3357899999999999999965555 9998
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-39 Score=260.84 Aligned_cols=252 Identities=17% Similarity=0.260 Sum_probs=192.0
Q ss_pred CCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCCCCceEE
Q psy15191 36 GGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDSKQLHLL 103 (312)
Q Consensus 36 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~~~~~l~ 103 (312)
+.+++.++.+|.++|++++|+|+ +|++|+.|++|++||+..+.. ..+..+.++|++.+|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la 74 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA 74 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE
T ss_pred ccccceeeccCCCceeeeccCCC--------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE
Confidence 45678899999999999999876 899999999999999976421 1234456678889999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc----cCceeeeecccCC
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT----TWKQIQTLPCHQL 178 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~----~~~~~~~~~~~~~ 178 (312)
+++.|++|++||+...............+.+|...|.+++|+|++++|++++.|+.|++ |++ .++....+.+|..
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 99999999999986422110011122234589999999999999999999999999999 552 2234556778999
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCC--CeEEEEeccCCCCcccceeeEEEEEcCC--CceEEEeccCCeEEEEe
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSS--GRLSLVACSDKTNGVHKRIIWGVAWSHD--SRYFLTISRDGVCVVWG 254 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd 254 (312)
.|.+++|+|++.+|++++.|+.|++||..+. +.+..+.. |...|.+++|+|+ +.+|++++.|+.|++||
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG-------HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-------CSSCEEEEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC-------CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEE
Confidence 9999999999999999999999999998765 33444443 8889999999998 67899999999999999
Q ss_pred cCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+..+.... ...|.+...+.+ |...|++++|++++ +|++++.|+. |+||
T Consensus 228 ~~~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-----v~iw 276 (330)
T 2hes_X 228 YMGDDEDD----QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-----LAVY 276 (330)
T ss_dssp EEEECTTS----CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-----EEEE
T ss_pred ecCCCccc----cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-----EEEE
Confidence 87643211 112334555555 89999999999765 8999955555 9998
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-39 Score=263.09 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=184.3
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCC--CCceEEEEeCC
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDS--KQLHLLSCSMD 108 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~--~~~~l~~~~~d 108 (312)
..+.+|.+.|++++|+|+ +++||+|+.|++|+|||+.++.. ..+..+.+.+ ++.+|++++.|
T Consensus 7 ~~~~~H~~~V~~v~~s~~------g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYY------GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp -------CCEEEEEECGG------GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred eecccccCeEEEeeEcCC------CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 345789999999999999 99999999999999999987642 1233334433 36799999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccC---ceeeeecccCCceeE
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTW---KQIQTLPCHQLTITQ 182 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~---~~~~~~~~~~~~v~~ 182 (312)
++|++||+++++..... .+.+|...|.+++|+|+ +.+|++++.|+.|++ |.++. +....+.+|...+.+
T Consensus 81 ~~v~iWd~~~~~~~~~~-----~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSH-----EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp SCEEEECCSSSCCCEEE-----EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred CEEEEEECCCCcceEEE-----EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 99999999874322222 23478899999999997 789999999999999 54432 223445588999999
Q ss_pred EEECCC-----------------CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC----ceE
Q psy15191 183 LAFSPD-----------------DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS----RYF 241 (312)
Q Consensus 183 ~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l 241 (312)
++|+|+ +++|++++.|+.|++||++........... ..|...|.+++|+|++ ++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l----~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL----EAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC----BCCSSCEEEEECCCCSSCSCCEE
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec----ccCCCceEEEEecCCCCCCCceE
Confidence 999997 478999999999999999755322222111 1288899999999986 789
Q ss_pred EEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 242 LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 242 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++++.|+.|++|++........ ....+..|...|.+++|+|++++||+++.|+. |+||
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~--------~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~-----v~lw 289 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTW--------SPKLLHKFNDVVWHVSWSITANILAVSGGDNK-----VTLW 289 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCC--------BCCEEEECSSCEEEEEECTTTCCEEEEESSSC-----EEEE
T ss_pred EEEcCCCeEEEEEccCccccch--------hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe-----EEEE
Confidence 9999999999999876321110 12344678899999999999999999965555 9998
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=256.23 Aligned_cols=268 Identities=19% Similarity=0.176 Sum_probs=223.9
Q ss_pred CeEEEEeccCCCceEEEEEeC-------------------CCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNG-------------------EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD 74 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~-------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 74 (312)
......+.+|...|++++|++ .+++.+..+.+|...|.+++|+|+ +++|++++.|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~d 95 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF------TKYCVTGSAD 95 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEETT
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC------CCEEEEEeCC
Confidence 345566888999999998554 447788889999999999999998 8999999999
Q ss_pred CcEEEeeecCCccc-------ccccccCCCCCceEEEEeCC-----CcEEEEcCCCCcceeeeee----eecccCCCcc-
Q psy15191 75 KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETA----RVGEVGGNTL- 137 (312)
Q Consensus 75 g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~- 137 (312)
|.|++||+.+++.. .+....+++++.++++++.+ +.|++||+........... ....+..+..
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999887763 33445567888899999999 9999999876543211111 1112223444
Q ss_pred -ceeEEEECCCCCeEEEeecCCeEEE-eccc-CceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE
Q psy15191 138 -GFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL 214 (312)
Q Consensus 138 -~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 214 (312)
.+.+++|+|+++++++++.+|.|++ |+++ ......+..|...|.+++|+|++++|++++.|+.|++||+++.+....
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 8999999999999999999999999 8877 677777888999999999999999999999999999999999888877
Q ss_pred EeccCCCCcccceeeEEEEEcCCCceEEEeccCC--------------eEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--------------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG 280 (312)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (312)
+. +...+..++|+|+++++++++.++ .+++||+..+. .+..+.+|.
T Consensus 256 ~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------------~~~~~~~~~ 315 (369)
T 3zwl_B 256 YE--------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE------------EIGRVQGHF 315 (369)
T ss_dssp EE--------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC------------EEEEEECCS
T ss_pred ec--------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc------------chhheeccc
Confidence 76 566799999999999999999988 89999988763 677888999
Q ss_pred cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 281 YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 281 ~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
..|++++|+|++++|++++. ||.|++|
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~-----dg~v~iw 342 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGE-----DGFIRLH 342 (369)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred CcEEEEEECCCCCEEEEEcC-----CCeEEEE
Confidence 99999999999999999955 4559998
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=260.91 Aligned_cols=235 Identities=15% Similarity=0.139 Sum_probs=189.1
Q ss_pred cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC-------cc------------cccccccCCCCCceEEEE
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE-------GN------------YLPYHMRDDSKQLHLLSC 105 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~-------~~------------~~~~~~~~~~~~~~l~~~ 105 (312)
.|...|.+++|+|+ |++|++++ |+++++||.... .. ..+..+.+.+++ .++++
T Consensus 28 ~~~~~v~~~~fs~d------G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~ 99 (344)
T 4gqb_B 28 CMERQLEAARYRSD------GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA 99 (344)
T ss_dssp SCCSEEEEEEECTT------SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE
T ss_pred cccCCEEEEEECCC------CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE
Confidence 57778999999999 99998887 778888873210 00 123334445553 78899
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
+.||+|++||+.+++....... ...+|...|.+++|+|++++|++|+.|+.|++ |+++.+.+..+.+|...|.+++
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~---~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKF---CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEE---EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred ECCCEEEEEeccCCCceeEeec---cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 9999999999998654433222 12378999999999999999999999999999 9988889999999999999999
Q ss_pred ECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCc
Q psy15191 185 FSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 185 ~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
|+|++. +|++++.|+.|++||+++.+....+.... +...+++++|+|+ +++|++|+.||.|++||++++.
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~--- 248 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA-----PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS--- 248 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----
T ss_pred ecCCCCCceeeeccccccccccccccceeeeeecce-----eeccceeeeecCCCCcceEEeccCCcEEEEECCCCc---
Confidence 999875 78999999999999999888776654321 5556899999995 5688999999999999998763
Q ss_pred ccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW 312 (312)
++..+.+|...|++++|+|++ ++|++|+.|+. |+||
T Consensus 249 ---------~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-----i~vw 285 (344)
T 4gqb_B 249 ---------CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-----LAVL 285 (344)
T ss_dssp ---------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-----EEEE
T ss_pred ---------EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-----EEEE
Confidence 678889999999999999998 58999965555 9998
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.4e-38 Score=252.14 Aligned_cols=231 Identities=20% Similarity=0.228 Sum_probs=191.9
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEE
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLL 103 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~ 103 (312)
..+..+|.+|.+.|++++|+|+ ++++|++|+.|++|++|++..... ..+..+.+++++.+++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~-----~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 81 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAG-----QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL 81 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSS-----CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEEEEEEccccceEEEEEccCC-----CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE
Confidence 4567789999999999999986 147999999999999999864321 2344455678889999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~ 182 (312)
+++.|++|++||+.+++ ....+ .+|...|.+++|+|++.++++++.|+.|++ |++ ......+.+|...|.+
T Consensus 82 s~s~D~~v~~wd~~~~~--~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 82 SASWDKTLRLWDVATGE--TYQRF-----VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ 153 (319)
T ss_dssp EEETTSEEEEEETTTTE--EEEEE-----ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred EEeCCCEEEEEECCCCC--eeEEE-----ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence 99999999999998843 33333 478999999999999999999999999999 554 2344556689999999
Q ss_pred EEECCC------CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 183 LAFSPD------DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 183 ~~~~~~------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
+.|+|. +..+++++.|+.|++||+++.+....+.. |...|.+++|+|++++|++++.||.|++||+.
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-------HNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC-------CCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC-------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999995 45899999999999999998776666554 88899999999999999999999999999998
Q ss_pred CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
... .+..+.. ...|.+++|+|++.+|++++.
T Consensus 227 ~~~------------~~~~~~~-~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 227 AKK------------AMYTLSA-QDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp TTE------------EEEEEEC-CSCEEEEEECSSSSEEEEEET
T ss_pred CCc------------EEEEecC-CCcEEEEEEcCCCCEEEEEcC
Confidence 762 4555554 467999999999999998853
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.5e-38 Score=278.86 Aligned_cols=274 Identities=19% Similarity=0.202 Sum_probs=209.3
Q ss_pred eEEEEeccCCCceEEEEEeCCC-------------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191 15 KVLYTLTNHKSKVMAVKWNGEG-------------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV 69 (312)
Q Consensus 15 ~~~~~~~~h~~~v~~~~w~~~~-------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 69 (312)
+....+.+|.+.|++++|+++. +.....+.+|...|.+++|+|+ +++|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~------g~~l~ 446 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD------GQFAL 446 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT------SSEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC------CCEEE
Confidence 3445688899999998865543 2334678899999999999999 99999
Q ss_pred EecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191 70 SCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
+|+.||+|+|||+.++... .+..+.+++++.+|++++.|++|++||....... . ......+|...|.+
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~---~-~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY---T-ISEGGEGHRDWVSC 522 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE---E-ECSSTTSCSSCEEE
T ss_pred EEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce---e-eccCCCCCCCcEEE
Confidence 9999999999999887652 3455566788889999999999999998653211 1 11223468888999
Q ss_pred EEECCCC--CeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191 142 CKFGPRG--DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 142 ~~~~~~~--~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 218 (312)
++|+|++ ..+++++.|+.|++ |+++.+....+.+|...|++++|+|++++|++++.||.|++||+++.+.+..+.
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-- 600 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-- 600 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--
Confidence 9999987 57999999999999 888888888888999999999999999999999999999999999887665443
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc-------eeEEeeccCcceeEEEeccC
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP-------EVQKLYGHGYEIYSLAASHD 291 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~s~~ 291 (312)
+...|.+++|+|++.+|++++ ++.|++||+..+.....+....... .......+...+++++|+|+
T Consensus 601 ------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd 673 (694)
T 3dm0_A 601 ------ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD 673 (694)
T ss_dssp ------CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT
T ss_pred ------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC
Confidence 455699999999998887765 5569999998763211110000000 00000112224789999999
Q ss_pred CCeEEEEecCCCcccceEEeC
Q psy15191 292 GTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 292 ~~~l~s~s~d~~~~dg~i~iW 312 (312)
|++|++|+. ||.|+||
T Consensus 674 g~~l~sgs~-----Dg~i~iW 689 (694)
T 3dm0_A 674 GSTLFSGYT-----DGVIRVW 689 (694)
T ss_dssp SSEEEEEET-----TSEEEEE
T ss_pred CCEEEEEcC-----CCeEEEE
Confidence 999999955 5559999
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9e-38 Score=259.46 Aligned_cols=263 Identities=17% Similarity=0.255 Sum_probs=201.9
Q ss_pred EEEeCCCCceE----EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------------
Q psy15191 30 VKWNGEGGKVL----YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------------- 88 (312)
Q Consensus 30 ~~w~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------------- 88 (312)
+.|++...+.. ....+|...|++++|+|+ |++||+|+ ++.+++|++.+++..
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspd------g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~ 115 (393)
T 1erj_A 43 ILYNPALPREIDVELHKSLDHTSVVCCVKFSND------GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN 115 (393)
T ss_dssp EEECTTSCCCEEEEEEEEEECSSCCCEEEECTT------SSEEEEEC-BSCEEEEETTTCCEEEEECC------------
T ss_pred EEECCCCCcccCceeEEecCCCCEEEEEEECCC------CCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccc
Confidence 34766554322 222369999999999999 99999987 789999999876542
Q ss_pred ---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191 89 ---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159 (312)
Q Consensus 89 ---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 159 (312)
.+..+.+++++.+|++++.|+.|++||+.+.+ .... +.+|...|.+++|+|++++|++++.|+.
T Consensus 116 ~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~-----~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 188 (393)
T 1erj_A 116 TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMI-----LQGHEQDIYSLDYFPSGDKLVSGSGDRT 188 (393)
T ss_dssp -----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEE-----EccCCCCEEEEEEcCCCCEEEEecCCCc
Confidence 13456678899999999999999999998743 2222 3478899999999999999999999999
Q ss_pred EEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC
Q psy15191 160 LHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD 237 (312)
Q Consensus 160 i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 237 (312)
+++ |+++.+....+. +...+.+++|+| ++++|++++.|+.|++||+++......+.........|...|.+++|+|+
T Consensus 189 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred EEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 999 777766666665 667899999999 89999999999999999999887776654332222338889999999999
Q ss_pred CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 238 SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 238 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++|++|+.|+.|++||+................+...+.+|...|.+++|+|++++|++|+.|+ .|++|
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~iw 337 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFW 337 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence 99999999999999999976533211111111225667889999999999999999999995554 49998
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-37 Score=250.84 Aligned_cols=240 Identities=25% Similarity=0.362 Sum_probs=202.3
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d 108 (312)
..+..++.+|.+.|++++|+|+ +++|++|+.||.|++|++.+++.. .+....+++++.+|++++.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~------~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPN------GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEEcccCCcEEEEEECCC------CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence 5667889999999999999999 999999999999999999876552 34455667888899999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~ 187 (312)
+.|++||+++.+ .+... .+|...|.+++|+|+++++++++.|+.|++ |+++.+....+..|...|.+++|+|
T Consensus 87 ~~i~vwd~~~~~--~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 87 KTLKIWDVSSGK--CLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp SEEEEEETTTCC--EEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred CEEEEEECCCCc--EEEEE-----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 999999998744 22332 378889999999999999999999999999 8888888888889999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc
Q psy15191 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN 267 (312)
Q Consensus 188 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 267 (312)
++++|++++.|+.|++||+++.+.+..+... +...+..++|+|++++|++++.||.|++||+..+.
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------- 225 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK-------- 225 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCS------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE--------
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEecc------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------
Confidence 9999999999999999999988776655432 56678999999999999999999999999998763
Q ss_pred cccceeEEeeccCcceeE--EEe-ccCCCeEEEEecCCCcccceEEeC
Q psy15191 268 TLWPEVQKLYGHGYEIYS--LAA-SHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 268 ~~~~~~~~~~~~~~~v~~--~~~-s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.+|...+.. ..+ .+++.+|++|+.| |.|++|
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~vw 264 (312)
T 4ery_A 226 ----CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----NLVYIW 264 (312)
T ss_dssp ----EEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----SCEEEE
T ss_pred ----EEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----CEEEEE
Confidence 56677777654332 233 4678999999554 459998
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.1e-37 Score=250.08 Aligned_cols=234 Identities=14% Similarity=0.168 Sum_probs=200.8
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEEEeC
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLSCSM 107 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~ 107 (312)
....+|...|++++|+|+ +++|++++ ||.|++||+.++.. ..+..+.+++++.++++++.
T Consensus 45 ~~~~~h~~~v~~~~~~~~------~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNP------TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp EEEECCSSCCCEEEECSS------SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred ceeccCCCceEEEEEecC------CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 344479999999999999 89999999 99999999987643 12344556788889999999
Q ss_pred CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEEC
Q psy15191 108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFS 186 (312)
Q Consensus 108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~ 186 (312)
|+.|++||+.+.+....... ..|...+.+++|+|+++++++++.++.+++ |+++.+....+..|...+.+++|+
T Consensus 118 d~~i~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAEL-----TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp SSEEEEEECCCC--EEEEEE-----ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEECCCCCcceeeec-----ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 99999999998653333332 367888999999999999999999999999 888888888888899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ 266 (312)
Q Consensus 187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 266 (312)
|++++|++++.|+.|++||+++.+....+. +...+.+++|+|++++|++++.|+.|++||+...
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-------- 256 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD--------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-------- 256 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS--------
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec--------CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------
Confidence 999999999999999999999887776654 6677999999999999999999999999999876
Q ss_pred ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
....+..|...|.+++|+|++++|++++. ||.|++|
T Consensus 257 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~ 292 (337)
T 1gxr_A 257 -----DKYQLHLHESCVLSLKFAYCGKWFVSTGK-----DNLLNAW 292 (337)
T ss_dssp -----CEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred -----CeEEEcCCccceeEEEECCCCCEEEEecC-----CCcEEEE
Confidence 34567789999999999999999999954 5559998
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-38 Score=259.39 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=187.5
Q ss_pred EEccccCcEEEEEEecCcCcCCCCceEEEecC------CCcEEEeeecCCccc------------ccccccCCCCCceEE
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL------DKTAILWKYVSEGNY------------LPYHMRDDSKQLHLL 103 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~------dg~i~vw~~~~~~~~------------~~~~~~~~~~~~~l~ 103 (312)
...+|...|++++|+|+ |++|++|+. |+.|++|+..++... .+..+.+.+++ .++
T Consensus 37 ~p~~H~~~V~~v~fSpD------G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l 109 (357)
T 4g56_B 37 APACMEVQIGAVRYRRD------GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GIL 109 (357)
T ss_dssp ---CCCSEEEEEEECSS------SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEE
T ss_pred CcccccCCEEEEEECCC------CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEE
Confidence 34579999999999999 999999997 778999987665431 23344455665 567
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~ 182 (312)
+++.||+|++||+.+++....... ...+|...|.+++|+|++++|++++.|+.|++ |.++.+....+.+|...|++
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~---~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKF---AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp EEETTSCEEEC--------CCCCE---EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEECCCEEEEeeccccceeEEEee---ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 788999999999987554332221 22468899999999999999999999999999 88888888899999999999
Q ss_pred EEECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCC
Q psy15191 183 LAFSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 183 ~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
++|+|++. ++++++.|+.|++||+++.+....+.... +...+++++|+|++ .+|++|+.|+.|++||+..+.
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~-----~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~- 260 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA-----SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD- 260 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT-----CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc-----ccccccchhhhhcccceEEEeecccceeEEECCCCc-
Confidence 99999875 78999999999999999877654433221 66779999999974 688899999999999998763
Q ss_pred CcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191 261 EEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW 312 (312)
++..+.+|...|++++|+|++ ++||+|+.|+. |+||
T Consensus 261 -----------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-----i~iw 297 (357)
T 4g56_B 261 -----------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-----VAVL 297 (357)
T ss_dssp -----------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-----EEEE
T ss_pred -----------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-----EEEE
Confidence 577888999999999999997 58999955555 9998
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-36 Score=246.88 Aligned_cols=255 Identities=16% Similarity=0.231 Sum_probs=208.3
Q ss_pred EEeccCCCceEEEEEeCCCCc---------------------eEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCC
Q psy15191 18 YTLTNHKSKVMAVKWNGEGGK---------------------VLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLD 74 (312)
Q Consensus 18 ~~~~~h~~~v~~~~w~~~~~~---------------------~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 74 (312)
....+|...|.+++|++++.. .+..+. +|...|.+++|+|+ +++|++++.|
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d 118 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD------GCTLIVGGEA 118 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT------SSEEEEEESS
T ss_pred ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC------CCEEEEEcCC
Confidence 334468888888887765421 122233 68899999999999 8999999999
Q ss_pred CcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191 75 KTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144 (312)
Q Consensus 75 g~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (312)
+.|++||+.+++. ..+....+.+++.++++++.|+.|++||+++.+ .... +..|...+.+++|
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--~~~~-----~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQ-----FQGHTDGASCIDI 191 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEE-----ECCCSSCEEEEEE
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--eeee-----eecccCceEEEEE
Confidence 9999999988763 123445567788899999999999999998743 2222 2367889999999
Q ss_pred CCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 145 GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 145 ~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
+|+++++++++.|+.+++ |+++.+....+. +...+.+++|+|++++|++++.|+.|++||+++.+.... ..
T Consensus 192 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~------ 263 (337)
T 1gxr_A 192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HL------ 263 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CC------
T ss_pred CCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE-cC------
Confidence 999999999999999999 888777776665 788999999999999999999999999999998765432 22
Q ss_pred ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
|...|.+++|+|++++|++++.||.|++||+..+. .+ ....|...|.+++|+|++++|++++.|+.
T Consensus 264 -~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~------------~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 264 -HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA------------SI-FQSKESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------EE-EEEECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred -CccceeEEEECCCCCEEEEecCCCcEEEEECCCCe------------EE-EEecCCCcEEEEEECCCCCEEEEecCCCe
Confidence 78889999999999999999999999999998763 22 33468899999999999999999965555
Q ss_pred cccceEEeC
Q psy15191 304 PEHAAIIIW 312 (312)
Q Consensus 304 ~~dg~i~iW 312 (312)
|++|
T Consensus 330 -----i~iw 333 (337)
T 1gxr_A 330 -----ATVY 333 (337)
T ss_dssp -----EEEE
T ss_pred -----EEEE
Confidence 9998
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.8e-37 Score=256.09 Aligned_cols=277 Identities=14% Similarity=0.237 Sum_probs=217.0
Q ss_pred EEEEeccCCCceEEEE-----------------EeCCCCc------eEEEEccccCcEEEEEEecCcCcCCCC---ceEE
Q psy15191 16 VLYTLTNHKSKVMAVK-----------------WNGEGGK------VLYTLTNHKSKVMAVKWVLNTSLDPEH---KDLV 69 (312)
Q Consensus 16 ~~~~~~~h~~~v~~~~-----------------w~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~---~~l~ 69 (312)
....+.+|.+.|++++ |+.++++ .+..+.+|...|++++|+|+ ...++ ++|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA--IERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEE--EETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecc--cccCCccccEEE
Confidence 4456778888888887 4444566 68888899999999999874 12236 7999
Q ss_pred EecCCCcEEEeeecCCcc-----c-------------ccccccCC----CCCce-EEEEeCCCcEEEEcCCC------Cc
Q psy15191 70 SCSLDKTAILWKYVSEGN-----Y-------------LPYHMRDD----SKQLH-LLSCSMDKSIIVWAPDP------TT 120 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~-----~-------------~~~~~~~~----~~~~~-l~~~~~d~~i~i~d~~~------~~ 120 (312)
+++.||.|++||+.+++. . .+..+.+. +++.+ |++++.|+.|++||+.+ .+
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999988763 1 23334456 78888 99999999999999987 33
Q ss_pred cee-----eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc---c---CCceeEEEECCC
Q psy15191 121 GLW-----LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC---H---QLTITQLAFSPD 188 (312)
Q Consensus 121 ~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~---~---~~~v~~~~~~~~ 188 (312)
... ...........|...+.+++|+|++ .+++++.++.+++ |+++.+....+.. | ...|.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 322 1110001113577889999999999 9999999999999 8888888888887 8 999999999999
Q ss_pred CCEEEEEecC---CeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 189 DTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 189 ~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+++|++++.| +.|++||+++.+.+..+...... ...|...|.+++|+|++++|++++.||.|++||+..+.
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 9999999999 99999999988887776642110 01166789999999999999999999999999998763
Q ss_pred CCcccccccccceeEEee------cc---------------CcceeEEEeccCC----------CeEEEEecCCCcccce
Q psy15191 260 TEEDLVQNTLWPEVQKLY------GH---------------GYEIYSLAASHDG----------TLLASACKATKPEHAA 308 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~s~s~d~~~~dg~ 308 (312)
.+..+. +| ...|++++|+|++ ++|++++. ||.
T Consensus 325 ------------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~-----dg~ 387 (397)
T 1sq9_A 325 ------------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL-----DRS 387 (397)
T ss_dssp ------------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET-----TTE
T ss_pred ------------eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecC-----CCc
Confidence 566677 67 8999999999998 79999955 555
Q ss_pred EEeC
Q psy15191 309 IIIW 312 (312)
Q Consensus 309 i~iW 312 (312)
|++|
T Consensus 388 i~iw 391 (397)
T 1sq9_A 388 IRWF 391 (397)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-37 Score=258.83 Aligned_cols=279 Identities=17% Similarity=0.238 Sum_probs=220.6
Q ss_pred ceEeC----CCCe------EEEEecc----------CCCceEEEEEeCCC------------------CceEEEEccccC
Q psy15191 7 DVVNG----EGGK------VLYTLTN----------HKSKVMAVKWNGEG------------------GKVLYTLTNHKS 48 (312)
Q Consensus 7 ~v~~~----~~~~------~~~~~~~----------h~~~v~~~~w~~~~------------------~~~~~~~~~h~~ 48 (312)
.+|+. .+++ ....+.. |...|.+++|++++ ++.+..+.+|..
T Consensus 71 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 150 (425)
T 1r5m_A 71 RLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRA 150 (425)
T ss_dssp EEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCS
T ss_pred EEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCc
Confidence 46777 7777 4555554 67789999877654 456778888999
Q ss_pred cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------------------cccccCCCCCceEEEE
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------------------PYHMRDDSKQLHLLSC 105 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------------------~~~~~~~~~~~~l~~~ 105 (312)
.|.+++|+|+ +++|++++.|+.|++||+.+++... +....+.++ ..++++
T Consensus 151 ~v~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (425)
T 1r5m_A 151 PIVSVKWNKD------GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIP 223 (425)
T ss_dssp CEEEEEECTT------SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEE
T ss_pred cEEEEEECCC------CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEE
Confidence 9999999999 8999999999999999998776521 333333444 468999
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
+.++.|++||+.+.+.. .. +..|...+.+++|+|++++|++++.++.+++ |+++.+....+..|...|.+++
T Consensus 224 ~~~g~i~~~d~~~~~~~--~~-----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPT--GK-----LIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSAS 296 (425)
T ss_dssp CGGGCEEEEETTCSSCS--EE-----ECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEE
T ss_pred cCCCeEEEEEcCCCcee--ee-----eccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEE
Confidence 99999999999875422 22 2367889999999999999999999999999 7777777778888999999999
Q ss_pred ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191 185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264 (312)
Q Consensus 185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 264 (312)
|+|++ ++++++.|+.|++||+++.+.+..+.. |...|.+++|+|++++|++++.||.|++||+.........
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-------DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS 368 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-------TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred ECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-------CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence 99999 999999999999999998887777665 7788999999999999999999999999999765310000
Q ss_pred --------ccccccceeEEeeccCc--ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 265 --------VQNTLWPEVQKLYGHGY--EIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 265 --------~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
......+.+..+.+|.. .|++++|+|++++|++++.|+. |++|
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-----i~iw 421 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE-----GSVV 421 (425)
T ss_dssp ----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC-----CEEE
T ss_pred eecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce-----EEEE
Confidence 00011125777888876 9999999999999999965555 9998
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.5e-37 Score=253.59 Aligned_cols=269 Identities=14% Similarity=0.168 Sum_probs=211.8
Q ss_pred EeCCCCeEEEEeccCCCceEEEEEeCCC--------------------CceEEEEc--cccCcEEEEEEec-CcCcCCCC
Q psy15191 9 VNGEGGKVLYTLTNHKSKVMAVKWNGEG--------------------GKVLYTLT--NHKSKVMAVKWVL-NTSLDPEH 65 (312)
Q Consensus 9 ~~~~~~~~~~~~~~h~~~v~~~~w~~~~--------------------~~~~~~~~--~h~~~v~~~~~~~-~~~~~~~~ 65 (312)
+.....+....+.+|...|.+++|++++ ++....+. +|...|.+++|+| + +
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~------~ 131 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN------T 131 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE------E
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC------C
Confidence 4446678888899999999999988765 23334443 6999999999999 5 7
Q ss_pred ceEEEecCCCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN 135 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 135 (312)
.+|++++.|+.|++||+..... ..+....+++++.++++++.|+.|++||++. ...... ..|
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~-----~~h 203 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKE-----KLH 203 (383)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEE-----ECS
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEe-----ccC
Confidence 8999999999999999986433 1244555677888999999999999999953 222232 378
Q ss_pred ccceeEEEECCCCC-eEEEeecCCeEEE-eccc----CceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccC
Q psy15191 136 TLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTT----WKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQS 208 (312)
Q Consensus 136 ~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 208 (312)
...|.+++|+|+++ ++++++.|+.|++ |+++ ......+ +|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 89999999999999 8999999999999 7776 4444444 6999999999999 999999999999999999998
Q ss_pred CCeEEEEeccCCCCcccc----------eeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191 209 SGRLSLVACSDKTNGVHK----------RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG 278 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (312)
.+....+.........|. ..+..++|+|++++ +++.||.|++||+.++. .+..+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~------------~~~~l~~ 348 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG------------LVHQLRD 348 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC------------EEEEECB
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc------------eeeeecC
Confidence 877665554332221122 34555777788877 78899999999998774 5677776
Q ss_pred --cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 279 --HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 279 --~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|...+..++|+|++++|++|+ |+. |+||
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~-----i~iw 378 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM-GFN-----ILIW 378 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE-TTE-----EEEE
T ss_pred CCCCceEEEEEEecCccEEEEec-CCc-----EEEE
Confidence 567788889999999999994 444 9998
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-36 Score=250.84 Aligned_cols=276 Identities=13% Similarity=0.152 Sum_probs=212.4
Q ss_pred CCCeEEEEeccCCCceEEEEEeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc--
Q psy15191 12 EGGKVLYTLTNHKSKVMAVKWNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-- 87 (312)
Q Consensus 12 ~~~~~~~~~~~h~~~v~~~~w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-- 87 (312)
++++.+.+-. ..+.| ..|+.++++ .+..+.+|...|++++|+|+ +++|++++.||.|++||+.+++.
T Consensus 18 ~~~~~l~~~~-~d~~v--~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 18 KDRTQIAICP-NNHEV--HIYEKSGNKWVQVHELKEHNGQVTGVDWAPD------SNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp TTSSEEEEEC-SSSEE--EEEEEETTEEEEEEEEECCSSCEEEEEEETT------TTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCCEEEEEe-CCCEE--EEEeCCCCcEEeeeeecCCCCcccEEEEeCC------CCEEEEEcCCCeEEEEECCCCeeee
Confidence 4455555442 22222 227777777 88999999999999999999 89999999999999999987753
Q ss_pred --------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe
Q psy15191 88 --------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159 (312)
Q Consensus 88 --------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 159 (312)
..+....+++++.++++++.|+.|++||++.......... ....|...|.+++|+|+++++++++.|+.
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH---IKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE---ECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee---eecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 1344455678888999999999999999987553221111 12367889999999999999999999999
Q ss_pred EEE-ec------------------ccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 160 LHL-DV------------------TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 160 i~~-d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
+++ |+ .+.+....+..|...|.+++|+|++++|++++.|+.|++||+++.+.+..+..
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--- 242 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS--- 242 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC---
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc---
Confidence 999 63 34556666768999999999999999999999999999999999988887775
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC--CC--CCccccc-----------cccc-------cee-----
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE--PP--TEEDLVQ-----------NTLW-------PEV----- 273 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~--~~~~~~~-----------~~~~-------~~~----- 273 (312)
|...|.+++|+|++++|+++ .|+.|++|++.. +. ....... .+.| +..
T Consensus 243 ----~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 243 ----ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp ----SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred ----CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 77789999999999999888 899999999987 31 0000000 0000 011
Q ss_pred -EEe-eccCcceeEEEec-cCC---CeEEEEecCCCcccceEEeC
Q psy15191 274 -QKL-YGHGYEIYSLAAS-HDG---TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 274 -~~~-~~~~~~v~~~~~s-~~~---~~l~s~s~d~~~~dg~i~iW 312 (312)
..+ .+|...|++++|+ ++| ++|++|+ .||.|++|
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~-----~Dg~i~~W 357 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG-----MDGGMSIW 357 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEE-----TTSEEEEE
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEec-----CCCceEEE
Confidence 233 4899999999976 666 9999995 45559999
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-36 Score=247.66 Aligned_cols=238 Identities=18% Similarity=0.258 Sum_probs=185.0
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc---------------cccccccCCCCCceE
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDSKQLHL 102 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~~~~~l 102 (312)
++...+.+|.+.|++++|.+.....+++++|+||+.|++|++||+...+. ..+..+.+++++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 45678999999999999932111111489999999999999999975431 134445567888899
Q ss_pred EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee----ee---cc
Q psy15191 103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ----TL---PC 175 (312)
Q Consensus 103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~----~~---~~ 175 (312)
++++.|++|++||+++++ ....+ .+|...|.+++|+|++++|++++.|+.|++ |++.. .. ..
T Consensus 92 ~s~s~D~~v~lwd~~~~~--~~~~~-----~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~----wd~~~~~~~~~~~~~~ 160 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGT--TYKRF-----VGHQSEVYSVAFSPDNRQILSAGAEREIKL----WNILGECKFSSAEKEN 160 (343)
T ss_dssp EEEETTSEEEEEETTSSC--EEEEE-----ECCCSCEEEEEECSSTTEEEEEETTSCEEE----EESSSCEEEECCTTTS
T ss_pred EEEcCCCcEEEEECCCCc--EEEEE-----cCCCCcEEEEEECCCCCEEEEEcCCCEEEE----EeccCCceeeeecccC
Confidence 999999999999998843 22332 378899999999999999999999999999 54421 11 26
Q ss_pred cCCceeEEEECCCC----------CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191 176 HQLTITQLAFSPDD----------THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 176 ~~~~v~~~~~~~~~----------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
|...|.+++|+|++ .+|++++.|+.|++||.. ......+.. |...|++++|+|++++|++|+
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~-------h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKA-------HESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEEC-------CSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcC-------ccccceEEEECCCCCEEEEEc
Confidence 88899999999987 789999999999999943 344444443 888899999999999999999
Q ss_pred cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.||.|++||+..... ....+ .+...|.+++|+|++.+|+++ .|+. |++|
T Consensus 233 ~dg~v~iwd~~~~~~-----------~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~-----v~iw 281 (343)
T 2xzm_R 233 KDKKLLIWDILNLTY-----------PQREF-DAGSTINQIAFNPKLQWVAVG-TDQG-----VKIF 281 (343)
T ss_dssp TTCEEEEEESSCCSS-----------CSEEE-ECSSCEEEEEECSSSCEEEEE-ESSC-----EEEE
T ss_pred CCCeEEEEECCCCcc-----------cceee-cCCCcEEEEEECCCCCEEEEE-CCCC-----EEEE
Confidence 999999999954321 22222 345679999999999887655 3444 8887
No 44
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-37 Score=257.48 Aligned_cols=286 Identities=15% Similarity=0.111 Sum_probs=213.7
Q ss_pred eEeCCCCeEEEEe-ccCCCceEEEEEeC-CCCce-------------------------EEEEccccCcEEEEEEecCcC
Q psy15191 8 VVNGEGGKVLYTL-TNHKSKVMAVKWNG-EGGKV-------------------------LYTLTNHKSKVMAVKWVLNTS 60 (312)
Q Consensus 8 v~~~~~~~~~~~~-~~h~~~v~~~~w~~-~~~~~-------------------------~~~~~~h~~~v~~~~~~~~~~ 60 (312)
.|+ .+++.+..+ .+|.+.|++++|++ ++..+ ...+ +|...|++++|+|+
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~-- 122 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN-- 122 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT--
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC--
Confidence 355 568899999 89999999999999 54211 1112 58899999999998
Q ss_pred cCCCCceEEEecCCCcEEEeeec---CCccc---------cccccc-------------CCCCCceEEEEeCCCcEEEEc
Q psy15191 61 LDPEHKDLVSCSLDKTAILWKYV---SEGNY---------LPYHMR-------------DDSKQLHLLSCSMDKSIIVWA 115 (312)
Q Consensus 61 ~~~~~~~l~s~~~dg~i~vw~~~---~~~~~---------~~~~~~-------------~~~~~~~l~~~~~d~~i~i~d 115 (312)
+++|++|+.||.|++||++ .++.. .+.+.+ .++++.++++++.|+.|++||
T Consensus 123 ----~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 123 ----FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp ----SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred ----CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 8999999999999999995 33221 111111 346688999999999999999
Q ss_pred CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEEC----CCC
Q psy15191 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFS----PDD 189 (312)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~----~~~ 189 (312)
+++.+. +..+. ...|...|.+++|+|++++|++++.||.|++ |+++.+....+. .|...|.+++|+ |++
T Consensus 199 ~~~~~~--~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~ 273 (437)
T 3gre_A 199 IRTLER--LQIIE---NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS 273 (437)
T ss_dssp TTTCCE--EEEEE---CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred CCCCee--eEEEc---cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc
Confidence 988543 22222 0127789999999999999999999999999 888877777765 688899999665 468
Q ss_pred CEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-------------------cccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191 190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-------------------GVHKRIIWGVAWSHDSRYFLTISRDGVC 250 (312)
Q Consensus 190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~l~s~~~dg~i 250 (312)
.+|++++.||.|++||+++.+....+....... ..|...|++++|+ ++++|++|+.||.|
T Consensus 274 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 274 VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 899999999999999999888777776442111 1166779999999 78999999999999
Q ss_pred EEEecCCCCCCccccccc-------------------------ccceeEEeeccCcceeEEEeccC--CCeEEEEecCCC
Q psy15191 251 VVWGLGEPPTEEDLVQNT-------------------------LWPEVQKLYGHGYEIYSLAASHD--GTLLASACKATK 303 (312)
Q Consensus 251 ~iwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s~d~~ 303 (312)
++||+.++.....+.... ..........|...|++++|+++ +.+|++|+.|
T Consensus 353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d-- 430 (437)
T 3gre_A 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS-- 430 (437)
T ss_dssp EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT--
T ss_pred EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC--
Confidence 999998875432221100 00011112348999999999998 8899999554
Q ss_pred cccceEEeC
Q psy15191 304 PEHAAIIIW 312 (312)
Q Consensus 304 ~~dg~i~iW 312 (312)
|.|+||
T Consensus 431 ---G~I~iw 436 (437)
T 3gre_A 431 ---GLIGIF 436 (437)
T ss_dssp ---SCEEEE
T ss_pred ---ceEEEe
Confidence 559999
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-37 Score=252.54 Aligned_cols=250 Identities=17% Similarity=0.302 Sum_probs=194.4
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCCC--CceEEE
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDSK--QLHLLS 104 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~~--~~~l~~ 104 (312)
|+++..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.... . ..+..+.+.++ +.+|++
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp ----CCEEECCCCEEEEEECSS------SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCccEEecCCcccEEEEEEcCC------CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence 4567788999999999999999 8999999999999999997432 2 12334444544 779999
Q ss_pred EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCc--eeeeecccCCc
Q psy15191 105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLT 179 (312)
Q Consensus 105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~ 179 (312)
++.||.|++||+.+.+...... ...|...|.+++|+|+ ++++++++.|+.|++ |+++.. ....+..|...
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred eccCCEEEEEEcCCCceeEeee-----ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 9999999999998754223222 2368889999999999 999999999999999 665553 23344578999
Q ss_pred eeEEEECC-------------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC---CceEEE
Q psy15191 180 ITQLAFSP-------------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD---SRYFLT 243 (312)
Q Consensus 180 v~~~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s 243 (312)
|.+++|+| ++.+|++++.|+.|++||+++........... ..|...|.+++|+|+ +++|++
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEE
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE---ecccCcEeEEEECCCCCCCCeEEE
Confidence 99999999 69999999999999999998765432221111 117888999999999 899999
Q ss_pred eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 244 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++.||.|++||+..+..... ..+.....|...|++++|+|++++|++++.|+. |++|
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-----i~iw 283 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWK-------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-----VTLW 283 (379)
T ss_dssp EETTSCEEEEEESSTTSCCE-------EEESSSSCCSSCEEEEEECSSSCCEEEEESSSS-----EEEE
T ss_pred EeCCCEEEEEeCCCCCccce-------eeeeccccCCCcEEEEEEcCCCCEEEEecCCCc-----EEEE
Confidence 99999999999987642210 022223448889999999999999999965555 9998
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-36 Score=253.71 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=198.7
Q ss_pred EeCCCCceEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc------ccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH------MRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~~~~~~~~~l~ 103 (312)
||..++++...+. +|...|++|+|+|+ |++|++|+.||+|+|||+.+++...... .....++..++
T Consensus 130 Wd~~tg~~~~~~~~~~~~~~V~sv~fspd------g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 130 WSASSGDILQLLQMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 203 (420)
T ss_dssp EETTTCCEEEEEECCSTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEE
T ss_pred EECCCCCEEEEEEecCCCCcEEEEEECCC------CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEE
Confidence 9999999887765 67788999999999 9999999999999999999887632211 11123556899
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc----eeeeecccCC
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK----QIQTLPCHQL 178 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~----~~~~~~~~~~ 178 (312)
+++.|+.+++||....... ...+.+|...+..+.++|+++++++++.|+.+++ +..+.+ .......|..
T Consensus 204 sgs~d~~i~~~d~~~~~~~------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~ 277 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVAEHH------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 277 (420)
T ss_dssp EEETTSEEEEEETTSSSCE------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS
T ss_pred EEeCCCceeEeeeccccee------eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC
Confidence 9999999999998864322 1223478889999999999999999999999999 555443 2334557899
Q ss_pred ceeEEEECCCCC-EEEE--EecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEE
Q psy15191 179 TITQLAFSPDDT-HLVS--VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVW 253 (312)
Q Consensus 179 ~v~~~~~~~~~~-~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iw 253 (312)
.|.+++|+|++. .+++ |+.|+.|++||+.++.....+. +...+.++.|+|+++.+++++ .|+.|+||
T Consensus 278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iw 349 (420)
T 4gga_A 278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AHSQVCSILWSPHYKELISGHGFAQNQLVIW 349 (420)
T ss_dssp CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--------CSSCEEEEEEETTTTEEEEEECTTTCCEEEE
T ss_pred ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--------cccceeeeeecCCCCeEEEEEecCCCEEEEE
Confidence 999999999654 4544 4579999999999988877766 455688999999999888764 79999999
Q ss_pred ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+.++. ++..+.+|.+.|++++|+|+|++|+|||.| ++|+||
T Consensus 350 d~~~~~------------~v~~l~gH~~~V~~l~~spdg~~l~S~s~D-----~tvriW 391 (420)
T 4gga_A 350 KYPTMA------------KVAELKGHTSRVLSLTMSPDGATVASAAAD-----ETLRLW 391 (420)
T ss_dssp ETTTCC------------EEEEECCCSSCEEEEEECTTSSCEEEEETT-----TEEEEE
T ss_pred ECCCCc------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecC-----CeEEEE
Confidence 998763 788899999999999999999999999555 559999
No 47
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-35 Score=238.41 Aligned_cols=253 Identities=15% Similarity=0.171 Sum_probs=207.6
Q ss_pred CeEEEEeccCCCceEEEE------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC
Q psy15191 14 GKVLYTLTNHKSKVMAVK------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK 75 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg 75 (312)
.+.+.++.+|.+.|.+++ |+..+++....+..|...|.+++|+|+ +++|++++.||
T Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSE------KELLLFGGKDT 81 (313)
T ss_dssp CEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETT------TTEEEEEETTS
T ss_pred HHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCC------CCEEEEecCCC
Confidence 478888999999999988 555556777888899999999999999 89999999999
Q ss_pred cEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191 76 TAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144 (312)
Q Consensus 76 ~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (312)
.|++|++...... .+....+ ++.++++++.|+.|++||. ....... ..|...+.+++|
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~----~~~~~~~-----~~~~~~v~~~~~ 150 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE----GSLVYNL-----QAHNASVWDAKV 150 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET----TEEEEEE-----ECCSSCEEEEEE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC----CcEEEec-----ccCCCceeEEEE
Confidence 9999998765321 1122222 4568999999999999992 2222222 367889999999
Q ss_pred CC-CCCeEEEeecCCeEEE-ecccCceeeeecc-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191 145 GP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPC-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221 (312)
Q Consensus 145 ~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 221 (312)
.| +++.+++++.++.+++ | ..+....+.. |...+.+++|+|++. +++++.||.|++||+++.+.+..+..
T Consensus 151 ~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~---- 223 (313)
T 3odt_A 151 VSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG---- 223 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred ccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc----
Confidence 88 9999999999999999 4 1223334444 889999999999998 99999999999999999888887775
Q ss_pred CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191 222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d 301 (312)
|...|++++|+|++ .|++++.||.|++||+.++. .+..+..|...|.+++|+|+++ +++++.|
T Consensus 224 ---~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~------------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d 286 (313)
T 3odt_A 224 ---HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS------------LKQVITLPAISIWSVDCMSNGD-IIVGSSD 286 (313)
T ss_dssp ---CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC------------EEEEEECSSSCEEEEEECTTSC-EEEEETT
T ss_pred ---CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc------------eeEEEeccCceEEEEEEccCCC-EEEEeCC
Confidence 78889999999999 68999999999999998873 6778888999999999999998 5678555
Q ss_pred CCcccceEEeC
Q psy15191 302 TKPEHAAIIIW 312 (312)
Q Consensus 302 ~~~~dg~i~iW 312 (312)
+. |++|
T Consensus 287 g~-----i~iw 292 (313)
T 3odt_A 287 NL-----VRIF 292 (313)
T ss_dssp SC-----EEEE
T ss_pred Cc-----EEEE
Confidence 44 9998
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-36 Score=250.33 Aligned_cols=265 Identities=18% Similarity=0.273 Sum_probs=204.9
Q ss_pred eccCCCceEEEEEeCC-----------------------CCceEEEEcc-----ccCcEEEEEEecCcCcCCCCceEEEe
Q psy15191 20 LTNHKSKVMAVKWNGE-----------------------GGKVLYTLTN-----HKSKVMAVKWVLNTSLDPEHKDLVSC 71 (312)
Q Consensus 20 ~~~h~~~v~~~~w~~~-----------------------~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~l~s~ 71 (312)
..+|...|++++|+|. +++.+..+.. |...|++++|+|+ ...++.+|++|
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~l~~~ 91 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYD--SNTSHPLLAVA 91 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEEC--TTTCCEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccC--CCCCCCEEEEe
Confidence 3467888888887763 2334444443 5577999999998 11125689999
Q ss_pred cCCCcEEEeeecCCccc--------ccccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191 72 SLDKTAILWKYVSEGNY--------LPYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC 142 (312)
Q Consensus 72 ~~dg~i~vw~~~~~~~~--------~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~ 142 (312)
+.||.|++||+.+++.. .+..+.+++ ++.++++++.||.|++||+++.+.. ... .....|...|.++
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~--~~~~~~~~~v~~~ 167 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV--AIF--GGVEGHRDEVLSA 167 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE--EEE--CSTTSCSSCEEEE
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE--EEe--cccccccCceeEE
Confidence 99999999999887652 344455567 7889999999999999999875422 221 1224688899999
Q ss_pred EECCCCCeEEEeecCCeEEE-ecccCceeeeec----------------------------ccCCceeEEEECCCCCEEE
Q psy15191 143 KFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP----------------------------CHQLTITQLAFSPDDTHLV 193 (312)
Q Consensus 143 ~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~ 193 (312)
+|+|++++|++++.||.|++ |+++.+....+. .|...|.+++|+ +++|+
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 99999999999999999999 655544433332 289999999998 77999
Q ss_pred EEecCCeEEEEEccCCCe--------------EEEEeccCCCCcccceeeEEEEEcCC--CceEEEeccCCeEEEEecCC
Q psy15191 194 SVSRDRRWGLYKRQSSGR--------------LSLVACSDKTNGVHKRIIWGVAWSHD--SRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 194 ~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~ 257 (312)
+++.|+.|++||+++... +..+.. |...|++++|+|+ +++|++++.||.|++||+..
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY-------SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-------SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccc-------cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 999999999999987654 333332 6778999999999 99999999999999999987
Q ss_pred CCCCcccccccccceeEEeecc--CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 258 PPTEEDLVQNTLWPEVQKLYGH--GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+.... .....+.+| ...|++++|+|++++|++++. ||.|++|
T Consensus 319 ~~~~~--------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-----dg~i~iw 362 (366)
T 3k26_A 319 EDPHK--------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD-----DASIWRW 362 (366)
T ss_dssp SSGGG--------CEEEEECCTTCCSCEEEEEECTTSSEEEEEET-----TSEEEEE
T ss_pred CCCcc--------ccceEEcccccCCceEEEEeCCCCCeEEEEeC-----CCEEEEE
Confidence 64221 145567777 789999999999999999954 5559998
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.6e-36 Score=248.62 Aligned_cols=244 Identities=16% Similarity=0.224 Sum_probs=202.9
Q ss_pred EeCCCCceEEEEcc-ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceE
Q psy15191 32 WNGEGGKVLYTLTN-HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHL 102 (312)
Q Consensus 32 w~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l 102 (312)
|+..+++....+.. |...|++++|+|+ +++|++|+.||.|++||+.+++... +....+ ++..+
T Consensus 118 w~~~~~~~~~~~~~~~~~~v~~v~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 118 WNADSGSVSALAETDESTYVASVKWSHD------GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEECTT------SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred eeCCCCcEeEeeecCCCCCEEEEEECCC------CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 88888988888776 8899999999999 8999999999999999998876532 222222 44589
Q ss_pred EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191 103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT 181 (312)
Q Consensus 103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~ 181 (312)
++++.|+.|++||++..... .. .+.+|...|.+++|+|++++|++++.|+.|++ |+++......+..|...|.
T Consensus 190 ~~~~~dg~i~i~d~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~ 263 (401)
T 4aez_A 190 SSGSRSGAIHHHDVRIANHQ-IG-----TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK 263 (401)
T ss_dssp EEEETTSEEEEEETTSSSCE-EE-----EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC
T ss_pred EEEcCCCCEEEEecccCcce-ee-----EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEE
Confidence 99999999999999853321 12 23478889999999999999999999999999 8888888888888999999
Q ss_pred EEEECCCCC-EEEEEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE--eccCCeEEEEecC
Q psy15191 182 QLAFSPDDT-HLVSVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT--ISRDGVCVVWGLG 256 (312)
Q Consensus 182 ~~~~~~~~~-~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~ 256 (312)
+++|+|++. ++++++ .|+.|++||+++.+....+. +...|.+++|+|++++|++ |+.||.|++||+.
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--------AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--------CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--------CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 999999765 555554 79999999999988887775 5667999999999999998 5589999999998
Q ss_pred CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+.. .....+.+|...|.+++|+|+|++|++++ .||.|++|
T Consensus 336 ~~~~----------~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-----~dg~i~iw 376 (401)
T 4aez_A 336 SSGL----------TKQVDIPAHDTRVLYSALSPDGRILSTAA-----SDENLKFW 376 (401)
T ss_dssp TTEE----------EEEEEEECCSSCCCEEEECTTSSEEEEEC-----TTSEEEEE
T ss_pred Cccc----------eeEEEecCCCCCEEEEEECCCCCEEEEEe-----CCCcEEEE
Confidence 7521 14455778999999999999999999995 55559998
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-37 Score=256.86 Aligned_cols=287 Identities=16% Similarity=0.175 Sum_probs=219.4
Q ss_pred CceEeCCCCe---EEEEeccCCCceEEEEEeCCC-----------------------CceEEEEccccCcEEEEEEecCc
Q psy15191 6 GDVVNGEGGK---VLYTLTNHKSKVMAVKWNGEG-----------------------GKVLYTLTNHKSKVMAVKWVLNT 59 (312)
Q Consensus 6 ~~v~~~~~~~---~~~~~~~h~~~v~~~~w~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~ 59 (312)
-++|+..+++ .+..+ .|...|.+++|++++ .+.+..+.+|...|++++|+|+
T Consensus 47 v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 124 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK- 124 (416)
T ss_dssp CEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-
T ss_pred EEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC-
Confidence 3578887775 44444 478889998866643 2477788899999999999986
Q ss_pred CcCCCCceEEEecCCCcEEEeeecCCc------c-----------cccccccCCCC-CceEEEEeCCCcEEEEcCCCCcc
Q psy15191 60 SLDPEHKDLVSCSLDKTAILWKYVSEG------N-----------YLPYHMRDDSK-QLHLLSCSMDKSIIVWAPDPTTG 121 (312)
Q Consensus 60 ~~~~~~~~l~s~~~dg~i~vw~~~~~~------~-----------~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~ 121 (312)
++.+|++++.|+.|++||+.+++ . ..+..+.++++ +.++++++.|+.|++||+++.+.
T Consensus 125 ----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 125 ----QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp ----STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred ----CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 26799999999999999998876 2 12334445666 67899999999999999998543
Q ss_pred eeeeeeee-cccCCCccceeEEEECCCC-CeEEEeecCC---eEEE-ecccC-ceeeeec-ccCCceeEEEECC-CCCEE
Q psy15191 122 LWLETARV-GEVGGNTLGFYGCKFGPRG-DYIIAHGFQG---SLHL-DVTTW-KQIQTLP-CHQLTITQLAFSP-DDTHL 192 (312)
Q Consensus 122 ~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~---~i~~-d~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l 192 (312)
. ..... ....+|...+.+++|+|++ .++++++.++ .|++ |+++. .....+. +|...|.+++|+| ++++|
T Consensus 201 ~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 278 (416)
T 2pm9_A 201 V--IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL 278 (416)
T ss_dssp E--EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE
T ss_pred c--eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE
Confidence 2 22221 1112337889999999997 6899999998 9999 77775 4556666 7999999999999 99999
Q ss_pred EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCccccc-----
Q psy15191 193 VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQ----- 266 (312)
Q Consensus 193 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~----- 266 (312)
++++.|+.|++||+++.+.+..+.. |...|.+++|+|++ .+|++++.||.|++||+...........
T Consensus 279 ~s~~~dg~v~~wd~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 351 (416)
T 2pm9_A 279 LSSGRDNTVLLWNPESAEQLSQFPA-------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ 351 (416)
T ss_dssp EEEESSSEEEEECSSSCCEEEEEEC-------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred EEEeCCCCEEEeeCCCCccceeecC-------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence 9999999999999999988887775 77889999999999 8999999999999999987654322110
Q ss_pred ----ccccce--------------eEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 267 ----NTLWPE--------------VQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 267 ----~~~~~~--------------~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...|.. +.....|..++.+++|+|+|++|++++ .|+.|+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~-----~d~~v~~w 410 (416)
T 2pm9_A 352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITP-----DGKGVSIT 410 (416)
T ss_dssp ---------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCT-----TSSCBCCB
T ss_pred cCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeC-----CCCeEEEE
Confidence 000000 011122677888999999999999995 45559999
No 51
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-37 Score=261.20 Aligned_cols=262 Identities=9% Similarity=0.003 Sum_probs=195.0
Q ss_pred EeCCCCceE----EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------------
Q psy15191 32 WNGEGGKVL----YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------------------- 88 (312)
Q Consensus 32 w~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------------------- 88 (312)
|+.++++.. ..+.+|.+.|++++|+|+...++++.+||+++.||+|++||+..+...
T Consensus 188 Wd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~ 267 (524)
T 2j04_B 188 FKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS 267 (524)
T ss_dssp EEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT
T ss_pred EEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC
Confidence 887776642 456778899999999997444455789999999999999999765321
Q ss_pred ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE--EECCCC-CeEEEeecCCeEEE-ec
Q psy15191 89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC--KFGPRG-DYIIAHGFQGSLHL-DV 164 (312)
Q Consensus 89 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~~~i~~-d~ 164 (312)
.+..+.++++ ..|++|+.||+|++||+++.... ...+.+|...|.++ +|+|++ .+|++++.|+.|++ |+
T Consensus 268 ~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~------~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~ 340 (524)
T 2j04_B 268 LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVP------SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP 340 (524)
T ss_dssp CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSC------SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECG
T ss_pred CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCc------eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC
Confidence 1223333443 48999999999999999864211 11234788999999 578887 89999999999999 66
Q ss_pred ccCceeeeecccCC--ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191 165 TTWKQIQTLPCHQL--TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242 (312)
Q Consensus 165 ~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 242 (312)
++.+....+.+|.. .|.+++|+|+++.+++++.|++|++||+++......+.+ |...|++++|+|++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-------H~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 341 KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-------RETTITAIGVSRLHPMVL 413 (524)
T ss_dssp GGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-------CSSCEEEEECCSSCCBCE
T ss_pred CCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-------CCCceEEEEeCCCCCeEE
Confidence 65555555555643 588999999999999999999999999998877666665 888999999999999999
Q ss_pred EeccCCeEEEEecCCCCCCc--------------cc--cc-cc---------c------cceeEEeeccCcceeEEEecc
Q psy15191 243 TISRDGVCVVWGLGEPPTEE--------------DL--VQ-NT---------L------WPEVQKLYGHGYEIYSLAASH 290 (312)
Q Consensus 243 s~~~dg~i~iwd~~~~~~~~--------------~~--~~-~~---------~------~~~~~~~~~~~~~v~~~~~s~ 290 (312)
+|+.||.|++||+....... .. .+ .. . ...+..+.+|...|.+++|+|
T Consensus 414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp 493 (524)
T 2j04_B 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE 493 (524)
T ss_dssp EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence 99999999999975432111 00 00 00 0 123556778999999999999
Q ss_pred CCC---eEEEEecCCCcccceEEeC
Q psy15191 291 DGT---LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 291 ~~~---~l~s~s~d~~~~dg~i~iW 312 (312)
++. +||+| +.||.|+||
T Consensus 494 ~~~~~~~lAsg-----~~~g~vrlw 513 (524)
T 2j04_B 494 TSAGGKCYAFS-----NSAGLLTLE 513 (524)
T ss_dssp STTTTTEEEEE-----CTTSEEEEE
T ss_pred CCCccHHHHhh-----ccCceEEEE
Confidence 964 99999 555559998
No 52
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=244.53 Aligned_cols=255 Identities=15% Similarity=0.182 Sum_probs=191.5
Q ss_pred cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc-cc--------ccccc------cCCCCCceEEEEeCCC
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG-NY--------LPYHM------RDDSKQLHLLSCSMDK 109 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-~~--------~~~~~------~~~~~~~~l~~~~~d~ 109 (312)
+|...|.+++|+|+ ++++.+|++|+.||.|++||+.+++ .. .+... .+++++.+|++++.|+
T Consensus 63 ~~~~~v~~~~~~~~---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~ 139 (357)
T 3i2n_A 63 EKAKPIKCGTFGAT---SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139 (357)
T ss_dssp EESSCEEEEECTTC---CTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred cccCcEEEEEEcCC---CCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC
Confidence 68899999999987 2235899999999999999998876 31 11112 3567888999999999
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEE----ECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK----FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
.|++||+++.+.. ...... ........+.+++ |+|+++++++++.++.|++ |+++.+.... ..|...|.+++
T Consensus 140 ~i~vwd~~~~~~~-~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~ 216 (357)
T 3i2n_A 140 TVKVWDPRQKDDP-VANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLE 216 (357)
T ss_dssp CEEEECTTSCSSC-SEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEE
T ss_pred eEEEEeCCCCCCc-ceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEE
Confidence 9999999875421 111110 0111234788888 7899999999999999999 7777776444 45889999999
Q ss_pred ECC---CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCCCC
Q psy15191 185 FSP---DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 185 ~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~ 260 (312)
|+| ++++|++++.||.|++||+++.+....+... ....|...|++++|+|+++ +|++++.||.|++||+..+..
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV--SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE--EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee--ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 999 9999999999999999999875443332210 0001788899999999998 899999999999999987643
Q ss_pred Cccccc-------ccccceeEEeeccCcceeEEEeccCCCeEE-EEecCCCcccceEEeC
Q psy15191 261 EEDLVQ-------NTLWPEVQKLYGHGYEIYSLAASHDGTLLA-SACKATKPEHAAIIIW 312 (312)
Q Consensus 261 ~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~s~d~~~~dg~i~iW 312 (312)
...... ...++.+..+.+|...|++++|+|++++|+ +++ .||.|+||
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~-----~d~~i~iw 349 (357)
T 3i2n_A 295 RSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS-----FDQTVRVL 349 (357)
T ss_dssp C--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEE
T ss_pred cccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec-----CCCcEEEE
Confidence 211100 112236778889999999999999999998 785 45559998
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-36 Score=255.43 Aligned_cols=265 Identities=13% Similarity=0.141 Sum_probs=195.3
Q ss_pred EEEEeccCCCceEEEEEeCCC--------------------Cc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecC
Q psy15191 16 VLYTLTNHKSKVMAVKWNGEG--------------------GK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73 (312)
Q Consensus 16 ~~~~~~~h~~~v~~~~w~~~~--------------------~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 73 (312)
......+|...|++++|+|.. ++ ....+.+|.+.|++|+|+|. ++.+|+||+.
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-----~~~~l~s~s~ 185 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-----NTNQFYASSM 185 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-----CTTEEEEECS
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-----CCCEEEEEeC
Confidence 334455677778888776633 22 23345689999999999984 2789999999
Q ss_pred CCcEEEeeecCCcc----------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191 74 DKTAILWKYVSEGN----------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK 143 (312)
Q Consensus 74 dg~i~vw~~~~~~~----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 143 (312)
||+|++||++++.. ..+..+.+++++.+|++|+.||.|++||++... ...+.+|...|.+++
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~--------~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE--------LWNLRMHKKKVTHVA 257 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB--------CCCSBCCSSCEEEEE
T ss_pred CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce--------eEEEecccceEEeee
Confidence 99999999976543 123344556788899999999999999987522 223457889999999
Q ss_pred ECCCCC-eEEEeecCCeEEE-ecccCceeeee---cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191 144 FGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTL---PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 144 ~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 218 (312)
|+|+++ ++++++.|+.|++ |+++.+....+ .+|...|++++|+|++++|++++.||.|++||+++......+...
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 999886 6778999999999 66555433332 378999999999999999999999999999999988776665543
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEec------------cCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeE
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTIS------------RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYS 285 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~ 285 (312)
......+ ..+....|+|++.++++++ .++.|++||..++. .+..+ .+|...|.+
T Consensus 338 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~------------~~~~l~~~~~~~v~s 404 (435)
T 4e54_B 338 PHRHFQH-LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK------------MMCQLYDPESSGISS 404 (435)
T ss_dssp CCCCCSS-SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC------------EEEEECCSSCCCCCC
T ss_pred ccccccc-ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc------------EEEEEeCCCCCcEEE
Confidence 3221111 1123345666666555543 34579999998874 45554 468888988
Q ss_pred E-EeccCCCeEEEEecCCCcccceEEeC
Q psy15191 286 L-AASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 286 ~-~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+ +|+|+|++|++|+ | +.|+||
T Consensus 405 ~~~fspdg~~lasg~-d-----~~i~iW 426 (435)
T 4e54_B 405 LNEFNPMGDTLASAM-G-----YHILIW 426 (435)
T ss_dssp EEEECTTSSCEEEEC-S-----SEEEEC
T ss_pred EEEECCCCCEEEEEc-C-----CcEEEE
Confidence 7 6999999999883 3 449999
No 54
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.7e-36 Score=244.82 Aligned_cols=243 Identities=14% Similarity=0.056 Sum_probs=180.0
Q ss_pred EEccccCcEEEEEEecCcC---cCCCCceEEEecCCCcEEEeeecCCccc-----------------ccccccCCCCCce
Q psy15191 42 TLTNHKSKVMAVKWVLNTS---LDPEHKDLVSCSLDKTAILWKYVSEGNY-----------------LPYHMRDDSKQLH 101 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~---~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------------~~~~~~~~~~~~~ 101 (312)
.|.+|...|.++++.++.- .+.++..|++++.|+.+++|++...... .+..+.++|++.+
T Consensus 68 ~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp ECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC
T ss_pred EccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE
Confidence 4667888898888765400 0111223344567889999998765431 1234556888888
Q ss_pred EEEE--eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceee--eecccC
Q psy15191 102 LLSC--SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQ--TLPCHQ 177 (312)
Q Consensus 102 l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~--~~~~~~ 177 (312)
++++ +.|++|++||+.+.+. +... .|...|.+++|+|+|+++++++.++.+.++..+..... ....|.
T Consensus 148 la~as~~~d~~i~iwd~~~~~~--~~~~------~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTE--KFEI------ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEE--EEEE------ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT
T ss_pred EEEEECCCCCEEEEeECCCCcE--EEEe------CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC
Confidence 7654 4789999999998443 2222 25567999999999999999998877777555554433 234688
Q ss_pred CceeEEEECCCCCEEEEEecCC----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191 178 LTITQLAFSPDDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 253 (312)
..|.+++|+|+++++++++.|+ .+++|++............ ...|...|++++|+|+|++||+|+.|+.|+||
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ---VTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE---EESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee---ecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 8999999999999999999887 6888998765432211110 01177889999999999999999999999999
Q ss_pred ecCCCCCCcccccccccceeEE-eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQK-LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+.++. ++.. +.+|...|++++|||||++||+||.|++ |+||
T Consensus 297 d~~~~~------------~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-----vrvw 339 (365)
T 4h5i_A 297 KLKDLS------------MSKIFKQAHSFAITEVTISPDSTYVASVSAANT-----IHII 339 (365)
T ss_dssp ETTTTE------------EEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-----EEEE
T ss_pred ECCCCc------------EEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-----EEEE
Confidence 998863 5665 4789999999999999999999965555 9998
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.9e-35 Score=246.73 Aligned_cols=266 Identities=20% Similarity=0.246 Sum_probs=217.4
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEE------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVK------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL 68 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 68 (312)
++|+..+++.+..+.+|.+.|.+++ |+.++++.+..+.+|...|.+++|++. +++.+|
T Consensus 145 ~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~----~~~~~l 220 (464)
T 3v7d_B 145 RVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEY----KNIKYI 220 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEES----SSCEEE
T ss_pred EEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecC----CCCCEE
Confidence 6899999999999999999999998 555567888999999999999999975 458899
Q ss_pred EEecCCCcEEEeeecCCccccc-----------------------------ccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191 69 VSCSLDKTAILWKYVSEGNYLP-----------------------------YHMRDDSKQLHLLSCSMDKSIIVWAPDPT 119 (312)
Q Consensus 69 ~s~~~dg~i~vw~~~~~~~~~~-----------------------------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 119 (312)
++|+.||.|++||+.+...... ......+++.++++++.|+.|++||+.+.
T Consensus 221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999987653210 00011345678999999999999999874
Q ss_pred cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191 120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD 198 (312)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 198 (312)
+ .+.. +.+|...|.+++|+|+++++++++.||.|++ |+++.+....+.+|...|.+++|+ +++|++++.|
T Consensus 301 ~--~~~~-----~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 301 K--CLYI-----LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp E--EEEE-----ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred c--EEEE-----ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence 3 2222 2478889999999999999999999999999 888888888999999999999997 5799999999
Q ss_pred CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEE-ee
Q psy15191 199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQK-LY 277 (312)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~ 277 (312)
|.|++||+++........ +...+..++|+|++++|++++ ||.|++||+.++. .+.. +.
T Consensus 372 g~v~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~------------~~~~~~~ 430 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYH--------HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK------------LVHANIL 430 (464)
T ss_dssp SEEEEEETTTCCEEEEEE--------CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC------------EEESCTT
T ss_pred CcEEEEECCCCceeeeec--------CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc------------EEehhhc
Confidence 999999999877665554 555677889999999999998 8999999998874 4443 56
Q ss_pred ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 278 GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 278 ~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.|...|.+++|+ ...+++++ +.||.+.+|
T Consensus 431 ~~~~~v~~v~~~-~~~l~~~~-----~~~g~~~i~ 459 (464)
T 3v7d_B 431 KDADQIWSVNFK-GKTLVAAV-----EKDGQSFLE 459 (464)
T ss_dssp TTCSEEEEEEEE-TTEEEEEE-----EETTEEEEE
T ss_pred cCCCcEEEEEec-CCEEEEEE-----EeCCeEEEE
Confidence 788999999997 33455555 334446654
No 56
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-35 Score=241.88 Aligned_cols=256 Identities=19% Similarity=0.249 Sum_probs=196.4
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------------cccccccCCC--CCceEEEEe
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDS--KQLHLLSCS 106 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~--~~~~l~~~~ 106 (312)
..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++.. ..+..+.+.+ ++.+|++++
T Consensus 5 ~~~~gH~~~v~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFY------GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CEECCCSSCEEEEEECSS------SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccCcccccceeEEEEcCC------CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 456899999999999999 89999999999999999987532 1344445556 478999999
Q ss_pred CCCcEEEEcCCCCcceee--eeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCceeeeec-------
Q psy15191 107 MDKSIIVWAPDPTTGLWL--ETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWKQIQTLP------- 174 (312)
Q Consensus 107 ~d~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~~~~~~~------- 174 (312)
.|+.|++||+++.+.... .......+..|...|.+++|+|+ ++++++++.|+.|++ |+++.+....+.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 999999999987532110 00112233478899999999999 999999999999999 666554433322
Q ss_pred ------ccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC----ceE
Q psy15191 175 ------CHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS----RYF 241 (312)
Q Consensus 175 ------~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l 241 (312)
.|...+.+++|+|+ +.++++++.|+.+.+|+............. .|...|++++|+|++ ++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-----GHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-----CCCSCEEEEEECCCSSCSSEEE
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-----CCCcceeEEEECCCCCCcceEE
Confidence 57888999999997 999999999999988887766542222211 178899999999998 899
Q ss_pred EEeccCCeEEEEecCCCCCCcccc----------------------------------cccccceeEEeeccCcceeEEE
Q psy15191 242 LTISRDGVCVVWGLGEPPTEEDLV----------------------------------QNTLWPEVQKLYGHGYEIYSLA 287 (312)
Q Consensus 242 ~s~~~dg~i~iwd~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~v~~~~ 287 (312)
++++.||.|++||+..+....... .....+.+..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 999999999999998652211100 0111246777889999999999
Q ss_pred eccCCCeEEEEecCCCcccceEEeC
Q psy15191 288 ASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 288 ~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+|++++|++++.|+. |+||
T Consensus 314 ~s~~~~~l~s~~~dg~-----v~iw 333 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGK-----VRLW 333 (351)
T ss_dssp ECSSSCCEEEEETTSC-----EEEE
T ss_pred EcCCCCEEEEecCCCc-----EEEE
Confidence 9999999999965555 9998
No 57
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=245.25 Aligned_cols=262 Identities=16% Similarity=0.158 Sum_probs=207.3
Q ss_pred EeCCCCceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCccc---------------------c
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------------------L 89 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------------------~ 89 (312)
|+.+.++....+.+|.+.|++++|+| + +++|++|+.||.|++||+.++... .
T Consensus 28 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 28 LGLELNKDRDVERIHGGGINTLDIEPVE------GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HTEEECTTEEECCCCSSCEEEEEECTTT------CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred eccccCcceeeeeccCCcEEEEEEecCC------CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 66667778889999999999999999 7 899999999999999999876542 2
Q ss_pred cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ec
Q psy15191 90 PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DV 164 (312)
Q Consensus 90 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~ 164 (312)
+..+.+.+ ++.++++++.|+.|++||+.+.+.. ... .+...+.++.++|. +.++++++.++.+++ |+
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA--DVF------NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE--EEE------ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc--eec------cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 33344455 6678999999999999999984432 222 24566889999884 458999999999999 88
Q ss_pred ccCceeeeecccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCC-eEEEEeccC--------CCCcccceeeEEEEE
Q psy15191 165 TTWKQIQTLPCHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSG-RLSLVACSD--------KTNGVHKRIIWGVAW 234 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~--------~~~~~~~~~v~~~~~ 234 (312)
++.+....+..|...|.+++|+|++. .|++++.||.|++||++... ....+.... .....|...|.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 88888888889999999999999998 58899999999999998765 333321110 111227889999999
Q ss_pred cCCCceEEEeccCCeEEEEecCCCCCCccccc-----------------------------------ccccceeEEeecc
Q psy15191 235 SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ-----------------------------------NTLWPEVQKLYGH 279 (312)
Q Consensus 235 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~ 279 (312)
+|++++|++++.||.|++||+..+........ ....+++..+.+|
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 99999999999999999999987643221100 0122467778889
Q ss_pred CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...|++++|+|++++|++++.|+. |++|
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~-----i~iw 361 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCN-----ILAW 361 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSC-----EEEE
T ss_pred CCeEEEEEEcCCCCEEEEECCCCe-----EEEE
Confidence 999999999999999999955555 9998
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.4e-37 Score=252.69 Aligned_cols=238 Identities=11% Similarity=0.086 Sum_probs=182.7
Q ss_pred EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC--cc--------cccccccCCCCCceEEEEeCCCcE
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--GN--------YLPYHMRDDSKQLHLLSCSMDKSI 111 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~--~~--------~~~~~~~~~~~~~~l~~~~~d~~i 111 (312)
.+..|.++|++++|+|+ +++|++|+.|+.|++||+.++ +. ..+..+.+++++.+|++++.|+.|
T Consensus 6 ~~~~~~~~v~~~~~s~~------g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQ------RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNA 79 (377)
T ss_dssp EEEECSSCCSCCEECSS------SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSE
T ss_pred eEecCCCcEEEEEECCC------CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeE
Confidence 34456789999999999 999999999999999999987 33 234455667888899999999999
Q ss_pred EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc---eeeeecc-cCCceeEEEEC
Q psy15191 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK---QIQTLPC-HQLTITQLAFS 186 (312)
Q Consensus 112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~---~~~~~~~-~~~~v~~~~~~ 186 (312)
++||+.+.+. ......+..|...|.+++|+|++++|++++.|+.|++ |+++.+ ....+.. |...|.+++|+
T Consensus 80 ~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 80 YVYEKRPDGT----WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp EEC------C----CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC
T ss_pred EEEEcCCCCc----eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc
Confidence 9999987540 0112223468889999999999999999999999999 554443 3455556 99999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCCe--------------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191 187 PDDTHLVSVSRDRRWGLYKRQSSGR--------------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV 252 (312)
Q Consensus 187 ~~~~~l~~~~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 252 (312)
|++++|++++.|+.|++||++.... ........ .|...|++++|+|++++|++++.||.|++
T Consensus 156 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 156 PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-
T ss_pred CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEE
Confidence 9999999999999999999964321 11111110 28888999999999999999999999999
Q ss_pred EecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191 253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d 301 (312)
||+..+.... ..+..+.+|...|.+++|+|++++|++++.+
T Consensus 232 wd~~~~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 232 AYPSAPEQPP--------RALITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CEECSTTSCE--------EECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred EECCCCCCcc--------eeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 9998874311 1266788899999999999999999999433
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.2e-34 Score=243.09 Aligned_cols=266 Identities=25% Similarity=0.372 Sum_probs=222.3
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEE
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV 69 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 69 (312)
++|+..+++.+..+.+|...|.++. |+..+++.+..+.+|...|.++.|++. .++
T Consensus 142 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--------~l~ 213 (445)
T 2ovr_B 142 KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--------RVV 213 (445)
T ss_dssp EEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT--------EEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCC--------EEE
Confidence 5899999999999999999999887 777788999999999999999999644 799
Q ss_pred EecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE
Q psy15191 70 SCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
+|+.||.|++||+.+++... +....+ ++..+++++.|+.|++||+++.+ .... +.+|...+.+
T Consensus 214 s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~--~~~~-----~~~~~~~v~~ 284 (445)
T 2ovr_B 214 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET--CLHT-----LQGHTNRVYS 284 (445)
T ss_dssp EEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE--EEEE-----ECCCSSCEEE
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc--EeEE-----ecCCCCceEE
Confidence 99999999999998876532 222222 56689999999999999998743 2222 2378889999
Q ss_pred EEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 142 CKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
++| ++.++++++.|+.|++ |+++.+....+.+|...+.++.+ +++++++++.||.|++||+++.+.+..+.....
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 360 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 360 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTS
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCC
Confidence 999 7899999999999999 99888888888899999998887 467999999999999999999888877765332
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-----eccCcceeEEEeccCCCeE
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-----YGHGYEIYSLAASHDGTLL 295 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l 295 (312)
|...|++++|+ +++|++|+.||.|++||+.++. .+..+ .+|.+.|.+++|+|++.+|
T Consensus 361 ----~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 361 ----HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE------------FIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp ----CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC------------EEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred ----CCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc------------eeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 67789999995 6899999999999999998874 44555 4688999999999999999
Q ss_pred EEEecCCCcccceEEeC
Q psy15191 296 ASACKATKPEHAAIIIW 312 (312)
Q Consensus 296 ~s~s~d~~~~dg~i~iW 312 (312)
++|+.|+. ++..|.||
T Consensus 423 a~~~~dg~-~~~~l~v~ 438 (445)
T 2ovr_B 423 AVGSRNGT-EETKLLVL 438 (445)
T ss_dssp EEECSSSS-SCCEEEEE
T ss_pred EEcccCCC-CccEEEEE
Confidence 99966663 34447776
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=235.08 Aligned_cols=244 Identities=20% Similarity=0.303 Sum_probs=197.7
Q ss_pred EeCCCCceEEEEc--cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc------ccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLT--NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH------MRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~~~~~~~~~l~ 103 (312)
||.++++++..+. +|...|++++|+|+ +++|++|+.||+|++||+++++...... ......+..++
T Consensus 50 Wd~~tg~~~~~~~~~~~~~~V~~v~~~~~------~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~ 123 (318)
T 4ggc_A 50 WSASSGDILQLLQMEQPGEYISSVAWIKE------GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 123 (318)
T ss_dssp EETTTCCEEEEEECCSTTCCEEEEEECTT------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEE
T ss_pred EECCCCCEEEEEEecCCCCeEEEEEECCC------CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEE
Confidence 9999999888775 67788999999999 9999999999999999999887632211 12234556899
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce----eeeecccCC
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ----IQTLPCHQL 178 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~----~~~~~~~~~ 178 (312)
+++.++.+++|+....... ...+.+|...+..+.++++++++++++.|+.|++ |+++.+. ......+.+
T Consensus 124 s~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 197 (318)
T 4ggc_A 124 SGSRSGHIHHHDVRVAEHH------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 197 (318)
T ss_dssp EEETTSEEEEEETTSSSCE------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred EEecCCceEeeecCCCcee------EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence 9999999999998864322 1222478889999999999999999999999999 6555432 223346788
Q ss_pred ceeEEEECCCCCEE---EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe--ccCCeEEEE
Q psy15191 179 TITQLAFSPDDTHL---VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI--SRDGVCVVW 253 (312)
Q Consensus 179 ~v~~~~~~~~~~~l---~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~iw 253 (312)
.|..+.++|++..+ ++++.++.|++||.+......... +...+..+.|+|++..++++ +.|+.|++|
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iw 269 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AHSQVCSILWSPHYKELISGHGFAQNQLVIW 269 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--------CSSCEEEEEEETTTTEEEEEECTTTCCEEEE
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--------ceeeeeeeeecccccceEEEEEcCCCEEEEE
Confidence 99999999976543 456788999999999877766555 66678999999999988765 479999999
Q ss_pred ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+.++. ++..+.+|.+.|++++|+|+|++|+|||.| |+|+||
T Consensus 270 d~~~~~------------~~~~l~gH~~~V~~l~~spdg~~l~S~s~D-----~~v~iW 311 (318)
T 4ggc_A 270 KYPTMA------------KVAELKGHTSRVLSLTMSPDGATVASAAAD-----ETLRLW 311 (318)
T ss_dssp ETTTCC------------EEEEECCCSSCEEEEEECTTSSCEEEEETT-----TEEEEE
T ss_pred ECCCCc------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecC-----CeEEEE
Confidence 998763 788899999999999999999999999555 459999
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.3e-35 Score=242.21 Aligned_cols=234 Identities=10% Similarity=0.107 Sum_probs=192.9
Q ss_pred EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--c--------cccccccCCCCCceEEEEeCCCcEE
Q psy15191 43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--N--------YLPYHMRDDSKQLHLLSCSMDKSII 112 (312)
Q Consensus 43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~--------~~~~~~~~~~~~~~l~~~~~d~~i~ 112 (312)
+..|.++|++++|+|+ +++|++++.|+.|++||+.+++ . ..+..+.+++++.++++++.|+.|+
T Consensus 4 ~~~~~~~i~~~~~s~~------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKD------RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTT------SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ecccCCCeEEEEECCC------CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEE
Confidence 4568999999999999 9999999999999999998875 2 1344455567888999999999999
Q ss_pred EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce---e-eeecccCCceeEEEECC
Q psy15191 113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ---I-QTLPCHQLTITQLAFSP 187 (312)
Q Consensus 113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~---~-~~~~~~~~~v~~~~~~~ 187 (312)
+||+.+.+..... ....|...+.+++|+|++++|++++.++.+++ |+...+. . .....|...|.+++|+|
T Consensus 78 vwd~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 78 VWTLKGRTWKPTL-----VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp EEEEETTEEEEEE-----ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred EEECCCCeeeeeE-----EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 9999774422221 22367888999999999999999999999999 5554441 2 22346889999999999
Q ss_pred CCCEEEEEecCCeEEEEEcc------------------CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe
Q psy15191 188 DDTHLVSVSRDRRWGLYKRQ------------------SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV 249 (312)
Q Consensus 188 ~~~~l~~~~~d~~i~~wd~~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 249 (312)
++++|++++.|+.|++||++ ..+....+.. |...|.+++|+|++++|++++.||.
T Consensus 153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 153 NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-------SCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-------CSSCEEEEEECSSSSEEEEEETTTE
T ss_pred CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-------CCCeEEEEEECCCCCEEEEEeCCCE
Confidence 99999999999999999964 3444444432 7888999999999999999999999
Q ss_pred EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 250 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|++||+..+. ++..+..|..+|.+++|+|++++|+++ .|+. |++|
T Consensus 226 i~i~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-----i~i~ 270 (372)
T 1k8k_C 226 VCLADADKKM------------AVATLASETLPLLAVTFITESSLVAAG-HDCF-----PVLF 270 (372)
T ss_dssp EEEEEGGGTT------------EEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-----CEEE
T ss_pred EEEEECCCCc------------eeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-----EEEE
Confidence 9999998763 678888999999999999999988877 6665 8887
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.8e-35 Score=244.31 Aligned_cols=258 Identities=16% Similarity=0.169 Sum_probs=201.0
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~ 103 (312)
|+..+++....+.+|...|++++|+|+ +++|++|+.|+.|++||+.+++.. .+..+.+++++.+|+
T Consensus 124 wd~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 124 LDSNFNLQREIDQAHVSEITKLKFFPS------GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp ECTTSCEEEEETTSSSSCEEEEEECTT------SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred EeCCCcceeeecccccCccEEEEECCC------CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 888889998888999999999999999 899999999999999999887652 334455677888999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecc-------------------cCCCccceeEEEECCCCCeEEEeecCCeEEE-e
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGE-------------------VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-D 163 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d 163 (312)
+++.|+.|++||+++.+.. ....... ...+...+.+++|+|+++++++++.||.|++ |
T Consensus 198 s~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 275 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTI--HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN 275 (420)
T ss_dssp EEETTSCEEEEETTTTEEE--EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred EEcCCCcEEEeECCCCcee--EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence 9999999999999985432 2222100 0012345666777899999999999999999 7
Q ss_pred cccCceeeeec-ccCCceeEEEECCCCC-EEEEEecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191 164 VTTWKQIQTLP-CHQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRY 240 (312)
Q Consensus 164 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (312)
+++.+....+. .|...|.+++|+|++. +|++++.||.|++||+++.+. +..+... +...|.++.+ |++++
T Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~------~~~~v~~~~~-~~~~~ 348 (420)
T 3vl1_A 276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN------EGTPINNVYF-AAGAL 348 (420)
T ss_dssp TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES------TTSCEEEEEE-ETTEE
T ss_pred CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc------CCCCceEEEe-CCCCE
Confidence 77777666554 5788999999999998 999999999999999998654 4555443 5667888855 57889
Q ss_pred EEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC---eEEEEecCCCcccceEEeC
Q psy15191 241 FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT---LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 241 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~s~d~~~~dg~i~iW 312 (312)
|++++.||.|++|++..+........ ......+.+|...|.+++|+|+++ .|++.+. +|.+.+|
T Consensus 349 l~s~~~d~~v~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~-----~g~~~~~ 415 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDPESERPAIE---FETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK-----NNFCALY 415 (420)
T ss_dssp EEEETTTEEEEEEEECCTTCCSCEEC---TTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET-----TTEEEEE
T ss_pred EEEecCCccEEEEeccCCCCCcccee---ccCccEEccCCcceEEEEEccCCCCcceEEEEcC-----CceEEEE
Confidence 99999999999999987543322111 113344668899999999999999 6777744 4458887
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.4e-35 Score=243.26 Aligned_cols=249 Identities=14% Similarity=0.190 Sum_probs=191.8
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC-ceEEEecCCCcEEEeeecCCccc----------ccccccCCC-CC
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH-KDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDS-KQ 99 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~-~~ 99 (312)
++....+....+.+|...|++++|+|+ + ++|++|+.||.|++||+.+++.. .+..+.+++ ++
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPT------HPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSS------CTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCC------CCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC
Confidence 344567788999999999999999999 7 89999999999999999876552 233444566 66
Q ss_pred ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCC
Q psy15191 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL 178 (312)
Q Consensus 100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~ 178 (312)
.++++++.|+.|++||+..... ... .....+...+.+++|+|++++|++++.|+.|++ |+ +.+....+..|..
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~~~---~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGSVI---QVF--AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA 205 (383)
T ss_dssp EEEEEEETTTEEEEEETTSCEE---EEE--ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS
T ss_pred CEEEEEeCCCEEEEEECCCCce---EEE--eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC
Confidence 7999999999999999985221 111 122345678999999999999999999999999 66 3556667778999
Q ss_pred ceeEEEECCCCC-EEEEEecCCeEEEEEccC----CCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEE
Q psy15191 179 TITQLAFSPDDT-HLVSVSRDRRWGLYKRQS----SGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVV 252 (312)
Q Consensus 179 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i 252 (312)
.|.+++|+|+++ +|++++.|+.|++||+++ ......+. |...|++++|+| ++++|++++.|+.|++
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--------HEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--------CSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--------CCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 999999999999 999999999999999997 44444442 788899999999 9999999999999999
Q ss_pred EecCCCCCCcccccccccceeEEeeccC----------cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 253 WGLGEPPTEEDLVQNTLWPEVQKLYGHG----------YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
||+.+......+... ......|. ..+..++|+|++++ ++ +.||.|++|
T Consensus 278 wd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~-----s~d~~i~iw 335 (383)
T 3ei3_B 278 YSSYDWSKPDQIIIH-----PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LL-----NDKRTIDIY 335 (383)
T ss_dssp EETTBTTSCSEEEEC-----CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CT-----TCCCCEEEE
T ss_pred EECCCCccccccccc-----cccccccccceEEeccCCCCceEEEecCCccc--cc-----CCCCeEEEE
Confidence 999877543221100 00011122 33445667777766 66 455669998
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.7e-34 Score=243.75 Aligned_cols=261 Identities=18% Similarity=0.231 Sum_probs=209.3
Q ss_pred eEEEEeccCCCce-EEEE-----------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCc
Q psy15191 15 KVLYTLTNHKSKV-MAVK-----------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76 (312)
Q Consensus 15 ~~~~~~~~h~~~v-~~~~-----------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~ 76 (312)
....++.+|...| .++. |+..+++.+..+.+|.+.|++++|+|+ + +|++|+.||+
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~------~-~l~s~s~dg~ 184 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG------G-ILVSGSTDRT 184 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST------T-EEEEEETTSC
T ss_pred cceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC------C-EEEEEeCCCC
Confidence 3556677777664 4443 888899999999999999999999988 5 8999999999
Q ss_pred EEEeeecCCcccc--------cccccC--CCCCceEEEEeCCCcEEEEcCCCCcceeeeee----------------eec
Q psy15191 77 AILWKYVSEGNYL--------PYHMRD--DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA----------------RVG 130 (312)
Q Consensus 77 i~vw~~~~~~~~~--------~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------~~~ 130 (312)
|++||+.+++... +....+ .+++.++++++.|+.|++||+.+......... ...
T Consensus 185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 9999998876521 112222 25667999999999999999987543221100 022
Q ss_pred ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC
Q psy15191 131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS 209 (312)
Q Consensus 131 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 209 (312)
...+|...+.++ +++++++++++.|+.|++ |+++.+....+.+|...|.+++|+|+++++++++.||.|++||+++.
T Consensus 265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 334677777665 678999999999999999 88888888888899999999999999999999999999999999988
Q ss_pred CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEec
Q psy15191 210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS 289 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 289 (312)
+.+..+.. |...|.+++|+ +++|++++.||.|++||+.+.. .... ..|...+..++|+
T Consensus 343 ~~~~~~~~-------h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~------------~~~~-~~~~~~~~~~~~~ 400 (464)
T 3v7d_B 343 ELMYTLQG-------HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS------------RKFS-YHHTNLSAITTFY 400 (464)
T ss_dssp EEEEEECC-------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC------------EEEE-EECTTCCCEEEEE
T ss_pred cEEEEEeC-------CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc------------eeee-ecCCCCccEEEEE
Confidence 88777765 88889999997 5899999999999999998763 2222 2366778889999
Q ss_pred cCCCeEEEEecCCCcccceEEeC
Q psy15191 290 HDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 290 ~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|++++|++++ | |.|++|
T Consensus 401 ~~~~~l~~~~-d-----g~i~iw 417 (464)
T 3v7d_B 401 VSDNILVSGS-E-----NQFNIY 417 (464)
T ss_dssp ECSSEEEEEE-T-----TEEEEE
T ss_pred eCCCEEEEec-C-----CeEEEE
Confidence 9999999995 4 449998
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-35 Score=244.27 Aligned_cols=223 Identities=14% Similarity=0.164 Sum_probs=167.1
Q ss_pred CCCeEEEEeccCCCceEEEEEeCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc---
Q psy15191 12 EGGKVLYTLTNHKSKVMAVKWNGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--- 86 (312)
Q Consensus 12 ~~~~~~~~~~~h~~~v~~~~w~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--- 86 (312)
.+++.+.+-. ..+.| ..|+..++ +.+..+.+|...|++++|+|+ +++|++++.|++|++||+.++.
T Consensus 21 ~~g~~l~~~~-~d~~i--~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~------~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 21 SQRTEFVTTT-ATNQV--ELYEQDGNGWKHARTFSDHDKIVTCVDWAPK------SNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSSEEECCC-SSSCB--CEEEEETTEEEECCCBCCCSSCEEEEEECTT------TCCEEEEETTSSEEEC------CCC
T ss_pred CCCCEEEEec-CCCEE--EEEEccCCceEEEEEEecCCceEEEEEEeCC------CCEEEEEeCCCeEEEEEcCCCCcee
Confidence 3566555442 22222 12777777 788889999999999999999 8999999999999999998876
Q ss_pred c--------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeecC
Q psy15191 87 N--------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGFQ 157 (312)
Q Consensus 87 ~--------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~ 157 (312)
. ..+..+.+++++.+|++++.|+.|++||+++.+..... ..+.. |...|.+++|+|++++|++++.|
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS----KHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC----EEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee----eEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 1 23455666788889999999999999999875421111 11224 88899999999999999999999
Q ss_pred CeEEE-ecc------------------cCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe----EEE
Q psy15191 158 GSLHL-DVT------------------TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR----LSL 214 (312)
Q Consensus 158 ~~i~~-d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~ 214 (312)
+.+++ |++ ..+....+ .|...|.+++|+|++++|++++.|+.|++||+++.+. +..
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 99999 553 22333444 7999999999999999999999999999999998876 444
Q ss_pred EeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
+.. |...|.+++|+|++++|++++.++.+ +|+..
T Consensus 247 ~~~-------~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 247 VKL-------SQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEC-------SSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ecC-------CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 443 78889999999999999999877765 67665
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.7e-35 Score=258.05 Aligned_cols=233 Identities=24% Similarity=0.302 Sum_probs=191.5
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCCCceEEE
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSKQLHLLS 104 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~~~~l~~ 104 (312)
+....+++|.+.|++++|+|+ ++.+|+||+.|++|++|++..... ..+..+.+++++.+|++
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~-----~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s 447 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPID-----NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALS 447 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTT-----CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred chhhhcccCCceeEEEEecCC-----CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEE
Confidence 445678999999999999986 247899999999999999876432 13445566788899999
Q ss_pred EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeee--------eccc
Q psy15191 105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQT--------LPCH 176 (312)
Q Consensus 105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~--------~~~~ 176 (312)
++.|+.|++||+.+.. ..... .+|...|.+++|+|++++|++++.|+.|++ |+.... ..+|
T Consensus 448 gs~Dg~v~vwd~~~~~--~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i----wd~~~~~~~~~~~~~~~h 516 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGV--STRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKL----WNTLGECKYTISEGGEGH 516 (694)
T ss_dssp EETTSEEEEEETTTTE--EEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEE----ECTTSCEEEEECSSTTSC
T ss_pred EeCCCcEEEEECCCCc--ceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEE----EECCCCcceeeccCCCCC
Confidence 9999999999998743 22332 378999999999999999999999999999 553211 1368
Q ss_pred CCceeEEEECCCC--CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 177 QLTITQLAFSPDD--THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 177 ~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
...|.+++|+|++ ..|++++.|+.|++||+++.+....+.. |...|++++|+|++++|++++.||.|++||
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-------HTGYVSTVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSBCEEEE
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-------CCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 8899999999986 5899999999999999998887776665 888999999999999999999999999999
Q ss_pred cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+.++. .+..+. +...|.+++|+|++.+|++++ + +.|+||
T Consensus 590 ~~~~~------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~-----~~i~iw 628 (694)
T 3dm0_A 590 LAEGK------------KLYSLE-ANSVIHALCFSPNRYWLCAAT-E-----HGIKIW 628 (694)
T ss_dssp TTTTE------------EEECCB-CSSCEEEEEECSSSSEEEEEE-T-----TEEEEE
T ss_pred CCCCc------------eEEEec-CCCcEEEEEEcCCCcEEEEEc-C-----CCEEEE
Confidence 98763 344443 456799999999998887763 2 338888
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-35 Score=245.26 Aligned_cols=251 Identities=14% Similarity=0.227 Sum_probs=202.7
Q ss_pred EeCCCCc---eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Ccc--------cccccccCC
Q psy15191 32 WNGEGGK---VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGN--------YLPYHMRDD 96 (312)
Q Consensus 32 w~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~--------~~~~~~~~~ 96 (312)
|+..+++ ++..+ .|...|++++|+|+ +++|++++.||.|++||+.. ... ..+..+.++
T Consensus 50 w~~~~~~~~~~~~~~-~~~~~v~~~~~s~~------~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 50 WSLLAADSEKPIASL-QVDSKFNDLDWSHN------NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp EESSSGGGCSCSCCC-CCSSCEEEEEECSS------SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred EEccCCCCCcEEEEE-ecCCceEEEEECCC------CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 8887765 44444 58899999999999 89999999999999999987 212 234445566
Q ss_pred CC-CceEEEEeCCCcEEEEcCCCCcceee--eeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceee
Q psy15191 97 SK-QLHLLSCSMDKSIIVWAPDPTTGLWL--ETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQ 171 (312)
Q Consensus 97 ~~-~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~ 171 (312)
++ +.++++++.|+.|++||+.+.+.... ..........|...+.+++|+|+ +.++++++.|+.|++ |+++.+...
T Consensus 123 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 123 AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 76 78999999999999999987541100 01111233468889999999999 789999999999999 888877777
Q ss_pred eeccc------CCceeEEEECCCC-CEEEEEecCC---eEEEEEccCCC-eEEEEeccCCCCcccceeeEEEEEcC-CCc
Q psy15191 172 TLPCH------QLTITQLAFSPDD-THLVSVSRDR---RWGLYKRQSSG-RLSLVACSDKTNGVHKRIIWGVAWSH-DSR 239 (312)
Q Consensus 172 ~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 239 (312)
.+..+ ...|.+++|+|++ .++++++.|+ .|++||+++.. ....+.. .|...|.+++|+| +++
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ------GHQKGILSLDWCHQDEH 276 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS------CCSSCEEEEEECSSCSS
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec------CccCceeEEEeCCCCCC
Confidence 77655 7899999999997 6899999998 99999999753 3333320 1788899999999 999
Q ss_pred eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC-CeEEEEecCCCcccceEEeC
Q psy15191 240 YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG-TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~s~d~~~~dg~i~iW 312 (312)
+|++++.||.|++||+.++. ++..+.+|...|.+++|+|++ .+|++++ .||.|++|
T Consensus 277 ~l~s~~~dg~v~~wd~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-----~d~~i~iw 333 (416)
T 2pm9_A 277 LLLSSGRDNTVLLWNPESAE------------QLSQFPARGNWCFKTKFAPEAPDLFACAS-----FDNKIEVQ 333 (416)
T ss_dssp CEEEEESSSEEEEECSSSCC------------EEEEEECSSSCCCCEEECTTCTTEEEECC-----SSSEEEEE
T ss_pred eEEEEeCCCCEEEeeCCCCc------------cceeecCCCCceEEEEECCCCCCEEEEEe-----cCCcEEEE
Confidence 99999999999999998763 678888999999999999999 8999995 45559998
No 68
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-35 Score=247.73 Aligned_cols=262 Identities=11% Similarity=0.111 Sum_probs=199.0
Q ss_pred EeCCCCceEEEE-ccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecC---Ccc----------cccccccCC
Q psy15191 32 WNGEGGKVLYTL-TNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVS---EGN----------YLPYHMRDD 96 (312)
Q Consensus 32 w~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~---~~~----------~~~~~~~~~ 96 (312)
|++ +++++..+ .+|.+.|++++|+| + +++|++|+.||+|++||+.+ +.. ..+..+.+.
T Consensus 48 w~~-~g~~~~~~~~~h~~~V~~~~~s~~~------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 120 (437)
T 3gre_A 48 GNL-RGKLIATLMENEPNSITSSAVSPGE------TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMI 120 (437)
T ss_dssp GGC-CCCEEEEECTTTTSCEEEEEEECSS------SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEEC
T ss_pred ccc-cceEEeeeccCCCCceEEEEECCCC------CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEe
Confidence 775 57788888 89999999999999 8 89999999999999999877 321 234455667
Q ss_pred CCCceEEEEeCCCcEEEEcCC---CCcceeeee---eeecccCC--CccceeEEE--ECCCCCeEEEeecCCeEEE-ecc
Q psy15191 97 SKQLHLLSCSMDKSIIVWAPD---PTTGLWLET---ARVGEVGG--NTLGFYGCK--FGPRGDYIIAHGFQGSLHL-DVT 165 (312)
Q Consensus 97 ~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~---~~~~~~~~--~~~~v~~~~--~~~~~~~l~~~~~~~~i~~-d~~ 165 (312)
+++.+|++++.||.|++||+. .++...... .....+.. +...+.++. ++++++++++++.|+.|++ |++
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 788899999999999999995 322111111 00111111 455677777 6789999999999999999 888
Q ss_pred cCceeeeecc--cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc----CCCc
Q psy15191 166 TWKQIQTLPC--HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS----HDSR 239 (312)
Q Consensus 166 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~ 239 (312)
+.+....+.. |...|++++|+|++++|++++.||.|++||+++.+.+..+... |...|.+++|+ |++.
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG------DHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT------TCEEEEEEEECTTTCTTEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC------CCCceEEEEeccccCCCcc
Confidence 8888888887 8899999999999999999999999999999987777666532 67789999655 5688
Q ss_pred eEEEeccCCeEEEEecCCCCCCccccccc------cccee------EEeec--cCcceeEEEeccCCCeEEEEecCCCcc
Q psy15191 240 YFLTISRDGVCVVWGLGEPPTEEDLVQNT------LWPEV------QKLYG--HGYEIYSLAASHDGTLLASACKATKPE 305 (312)
Q Consensus 240 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~------~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~ 305 (312)
+|++++.||.|++||+..+.....+.... .+.+. ..+.+ |...|++++|+ ++++|++| +.
T Consensus 275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~-----~~ 348 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD-----EA 348 (437)
T ss_dssp EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE-----GG
T ss_pred EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec-----CC
Confidence 99999999999999998764221111000 00000 01233 77889999999 78999999 55
Q ss_pred cceEEeC
Q psy15191 306 HAAIIIW 312 (312)
Q Consensus 306 dg~i~iW 312 (312)
||.|++|
T Consensus 349 d~~i~~w 355 (437)
T 3gre_A 349 TSSIVMF 355 (437)
T ss_dssp GTEEEEE
T ss_pred CCeEEEE
Confidence 5559998
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.7e-34 Score=230.77 Aligned_cols=214 Identities=19% Similarity=0.260 Sum_probs=166.1
Q ss_pred EeCCC--CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC-
Q psy15191 32 WNGEG--GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK- 98 (312)
Q Consensus 32 w~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~- 98 (312)
|+..+ .+++.++.+|.++|++++|+|. .++++|++|+.|++|++||+.+++. ..+..+.++++
T Consensus 36 w~~~~~~~~~~~~l~gH~~~V~~v~~s~~----~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 36 FEVEGETHKLIDTLTGHEGPVWRVDWAHP----KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp EEBCSSCBCCCEEECCCSSCEEEEEECCG----GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred EecCCCCcEEEEEEccccCCeEEEEecCC----CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 55432 3567889999999999999863 2378999999999999999987642 12333445554
Q ss_pred -CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-------------CCeEEEeecCCeEEE-e
Q psy15191 99 -QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-------------GDYIIAHGFQGSLHL-D 163 (312)
Q Consensus 99 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~~~~i~~-d 163 (312)
+.+|++++.|+.|++||+++...... ..+.+|...|.+++|+|+ +++|++|+.|+.|++ |
T Consensus 112 ~g~~l~s~s~d~~v~~wd~~~~~~~~~-----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd 186 (297)
T 2pm7_B 112 YGPMLLVASSDGKVSVVEFKENGTTSP-----IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK 186 (297)
T ss_dssp GCSEEEEEETTSEEEEEEBCSSSCBCC-----EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEE
T ss_pred CCcEEEEEECCCcEEEEEecCCCceee-----eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEE
Confidence 67999999999999999986432111 122478889999999997 578999999999999 6
Q ss_pred cccCc----eeeeecccCCceeEEEECCCC---CEEEEEecCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEE
Q psy15191 164 VTTWK----QIQTLPCHQLTITQLAFSPDD---THLVSVSRDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAW 234 (312)
Q Consensus 164 ~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~ 234 (312)
+++.. ....+.+|...|.+++|+|++ .+|++++.|++|++||++.... ...... ...|...|.+++|
T Consensus 187 ~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~----~~~~~~~v~~~~~ 262 (297)
T 2pm7_B 187 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK----EEKFPDVLWRASW 262 (297)
T ss_dssp EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS----SSCCSSCEEEEEE
T ss_pred EcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee----cccCCCcEEEEEE
Confidence 55443 455677899999999999984 8999999999999999986432 111110 0116778999999
Q ss_pred cCCCceEEEeccCCeEEEEecCCC
Q psy15191 235 SHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 235 ~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
+|++++||+++.||.|++|+....
T Consensus 263 s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 263 SLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CSSSCCEEEEETTSCEEEEEECTT
T ss_pred CCCCCEEEEEcCCCcEEEEEECCC
Confidence 999999999999999999998643
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-36 Score=253.86 Aligned_cols=225 Identities=10% Similarity=-0.019 Sum_probs=166.7
Q ss_pred CceEEEecCCCcEEEeeecCCccc------------ccccccCCCC------CceEEEEeCCCcEEEEcCCCCcce---e
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNY------------LPYHMRDDSK------QLHLLSCSMDKSIIVWAPDPTTGL---W 123 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~------------~~~~~~~~~~------~~~l~~~~~d~~i~i~d~~~~~~~---~ 123 (312)
++.|++++.|++|+|||+.+++.. .+..+.++|. +.+|++++.||+|++||+...... .
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 667778889999999999876531 1222333443 569999999999999999865321 0
Q ss_pred -eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeeecccCCceeEE--EECCCC-CEEEEEec
Q psy15191 124 -LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCHQLTITQL--AFSPDD-THLVSVSR 197 (312)
Q Consensus 124 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~ 197 (312)
....+...+.+|...|.+++|++++ .|++|+.||.|++ |+++.. ....+.+|...|.++ +|+|++ .+|++++.
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 0011122345788999999999864 7999999999999 666543 334567899999999 578887 89999999
Q ss_pred CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191 198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277 (312)
Q Consensus 198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 277 (312)
|++|+|||+++.+....+.... ....|.+++|+|+++.|++++.|+.|++||++.+. ++..+.
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~-----~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~------------~~~~l~ 394 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRF-----RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF------------AVHPLV 394 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEEC-----SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT------------CCEEEE
T ss_pred CCeEEEEECCCCCccccccccc-----ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc------------cceeee
Confidence 9999999999866554444311 11247889999999999999999999999998763 456788
Q ss_pred ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 278 GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 278 ~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+|.+.|++++|+|+|++|++|+.| |+|++|
T Consensus 395 gH~~~V~sva~Sp~g~~l~Sgs~D-----gtv~lw 424 (524)
T 2j04_B 395 SRETTITAIGVSRLHPMVLAGSAD-----GSLIIT 424 (524)
T ss_dssp ECSSCEEEEECCSSCCBCEEEETT-----TEEECC
T ss_pred cCCCceEEEEeCCCCCeEEEEECC-----CEEEEE
Confidence 999999999999999999999555 459998
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-34 Score=269.65 Aligned_cols=285 Identities=19% Similarity=0.273 Sum_probs=229.8
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEE-------------------eCCCCceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKW-------------------NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w-------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 67 (312)
.+|+..+++.+.++.+|...|.+++| +..+++.+..+.+|...|.+++|+|+ .++.+
T Consensus 640 ~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~ 715 (1249)
T 3sfz_A 640 QVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK----SNHLL 715 (1249)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS----SSCCE
T ss_pred EEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecC----CCceE
Confidence 58999999999999999999999984 44557788899999999999999996 44678
Q ss_pred EEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee-----------
Q psy15191 68 LVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR----------- 128 (312)
Q Consensus 68 l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----------- 128 (312)
+++|+.|+.|++||+.++... .+..+.+++++..+++++.||.|++||+.+.+........
T Consensus 716 l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1249)
T 3sfz_A 716 LATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795 (1249)
T ss_dssp EEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred EEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccc
Confidence 999999999999999887752 3445566788889999999999999998764322111000
Q ss_pred -------------------------------------ecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee
Q psy15191 129 -------------------------------------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI 170 (312)
Q Consensus 129 -------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~ 170 (312)
.....+|...+.+++|+|+++++++++.++.+++ |..+....
T Consensus 796 ~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 796 DVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE
T ss_pred cccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 0011256788999999999999999999999999 88888888
Q ss_pred eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe-----------------------------EEEEeccCC-
Q psy15191 171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR-----------------------------LSLVACSDK- 220 (312)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-----------------------------~~~~~~~~~- 220 (312)
..+.+|...|.+++|+|++++|++++.||.|++||+.+... .........
T Consensus 876 ~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 876 ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 88889999999999999999999999999999999764110 000111000
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
........+.+++|+|+++++++|+.||.|++||+..+. ....+.+|...|++++|+|+|++|++++.
T Consensus 956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~------------~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 1023 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR------------VFSSGVGHKKAVRHIQFTADGKTLISSSE 1023 (1249)
T ss_dssp EEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS------------CEEECCCCSSCCCCEEECSSSSCEEEECS
T ss_pred EEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc------------eeeecccCCCceEEEEECCCCCEEEEEcC
Confidence 001134578999999999999999999999999998763 56778899999999999999999999955
Q ss_pred CCCcccceEEeC
Q psy15191 301 ATKPEHAAIIIW 312 (312)
Q Consensus 301 d~~~~dg~i~iW 312 (312)
| |.|++|
T Consensus 1024 d-----g~i~vw 1030 (1249)
T 3sfz_A 1024 D-----SVIQVW 1030 (1249)
T ss_dssp S-----SBEEEE
T ss_pred C-----CEEEEE
Confidence 4 559998
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-34 Score=251.65 Aligned_cols=272 Identities=15% Similarity=0.179 Sum_probs=205.6
Q ss_pred ceEeCCCCeEEEEeccCCC---ceEEEEEeCC-C-------------------CceEEEE-c---cccCcEEEEEEecCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKS---KVMAVKWNGE-G-------------------GKVLYTL-T---NHKSKVMAVKWVLNT 59 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~---~v~~~~w~~~-~-------------------~~~~~~~-~---~h~~~v~~~~~~~~~ 59 (312)
.+|+..+++.+..+.+|.. .|.+++|+++ + ++.+..+ . +|...|.+++|+ +
T Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~- 263 (615)
T 1pgu_A 186 VFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D- 263 (615)
T ss_dssp EEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S-
T ss_pred EEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C-
Confidence 5799999999999999999 9999998877 4 4566677 5 899999999999 8
Q ss_pred CcCCCCceEEEecCCCcEEEeeecCCccccccccc-----------CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191 60 SLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR-----------DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR 128 (312)
Q Consensus 60 ~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 128 (312)
+.+|++++.|+.|++||+.+++........ ..+++.++++++.|+.|++||+.+.+.. ....
T Consensus 264 -----~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~--~~~~ 336 (615)
T 1pgu_A 264 -----SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL--KTIS 336 (615)
T ss_dssp -----SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE--EEEC
T ss_pred -----CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE--EEEe
Confidence 899999999999999999877653221111 0126668999999999999998763221 1111
Q ss_pred e-----------------------------cccCCCccceeEEEECCCCCeEEEeecCCeEEE-----------------
Q psy15191 129 V-----------------------------GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL----------------- 162 (312)
Q Consensus 129 ~-----------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----------------- 162 (312)
. .. ..|...|.+++| +++..+++++.|+.+++
T Consensus 337 ~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~-~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 414 (615)
T 1pgu_A 337 GHNKGITALTVNPLISGSYDGRIMEWSSSSMH-QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA 414 (615)
T ss_dssp CCSSCEEEEETTTTEEEETTSCEEETTTTEEE-CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEE
T ss_pred CCCCCEEEEEecCcEEECCCCeEEEEEchhhc-CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEE
Confidence 0 00 233444444444 33444455555444444
Q ss_pred ----------------------------------------------------------ecccCcee-eeecccCCceeEE
Q psy15191 163 ----------------------------------------------------------DVTTWKQI-QTLPCHQLTITQL 183 (312)
Q Consensus 163 ----------------------------------------------------------d~~~~~~~-~~~~~~~~~v~~~ 183 (312)
|..+.+.. ..+..|...|.++
T Consensus 415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~ 494 (615)
T 1pgu_A 415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI 494 (615)
T ss_dssp CSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEE
T ss_pred cCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEE
Confidence 33322222 3344688999999
Q ss_pred EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC----------CCceEEEeccCCeEEEE
Q psy15191 184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH----------DSRYFLTISRDGVCVVW 253 (312)
Q Consensus 184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~l~s~~~dg~i~iw 253 (312)
+|+|++++|++++.||.|++||+.+.+.+..+... |...|++++|+| ++++|++++.||.|++|
T Consensus 495 ~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw 568 (615)
T 1pgu_A 495 SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF------RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 568 (615)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC------CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC------CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEE
Confidence 99999999999999999999999987776554332 778899999999 99999999999999999
Q ss_pred ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+..+.. ++..+.+|...|++++|+|+++ |++++.|+. |++|
T Consensus 569 ~~~~~~~-----------~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~-----v~iw 610 (615)
T 1pgu_A 569 SVKRPMK-----------IIKALNAHKDGVNNLLWETPST-LVSSGADAC-----IKRW 610 (615)
T ss_dssp ESSCTTC-----------CEEETTSSTTCEEEEEEEETTE-EEEEETTSC-----EEEE
T ss_pred ECCCCce-----------echhhhcCccceEEEEEcCCCC-eEEecCCce-----EEEE
Confidence 9987632 5777889999999999999999 999955555 9999
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=241.55 Aligned_cols=228 Identities=17% Similarity=0.258 Sum_probs=190.0
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------cccccccCCCCCceEEEEeCCCcEEEEcCCC
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDP 118 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 118 (312)
|.+.|++++|+|+ +++|++++.||.|++||...... ..+..+.+.+++.+|++++.|+.|++||+.+
T Consensus 107 ~~~~v~~~~~s~~------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHD------GNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTT------SSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCC------CCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 6779999999999 99999999999999999433221 2344556678888999999999999999987
Q ss_pred CcceeeeeeeecccCCCccc---------------eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191 119 TTGLWLETARVGEVGGNTLG---------------FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182 (312)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~ 182 (312)
.+.. .... .+... +.+++|+|++ .+++++.++.+++ |+++.+....+..|...|.+
T Consensus 181 ~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 181 GTVM--QHFE-----LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISV 252 (425)
T ss_dssp TEEE--EEEC-----CC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEE
T ss_pred CcEE--EEee-----ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEE
Confidence 5432 2222 22222 8889999875 5888899999999 88888888888889999999
Q ss_pred EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
++|+|++++|++++.|+.|++||+++.+....+.. |...|.+++|+|++ +|++++.|+.|++||+..+.
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--- 321 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG-------HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--- 321 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC-------CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE---
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEecC-------CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc---
Confidence 99999999999999999999999998877776654 77889999999999 99999999999999998762
Q ss_pred ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+..|...|.+++|+|++++|++++.|+. |++|
T Consensus 322 ---------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~i~ 357 (425)
T 1r5m_A 322 ---------LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ-----VNVY 357 (425)
T ss_dssp ---------EEEEEECTTCCEEEEEECTTSSEEEEEETTSC-----EEEE
T ss_pred ---------EeEecccCCccEEEEEEcCCCCEEEEEECCCe-----EEEE
Confidence 67778889999999999999999999965555 9998
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.6e-34 Score=231.57 Aligned_cols=243 Identities=21% Similarity=0.222 Sum_probs=191.7
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------cccccccCCCC
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------YLPYHMRDDSK 98 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------~~~~~~~~~~~ 98 (312)
+..++.++..+|+||.+.|++|+|+|+ ++++|+||+.|++|+|||+...+. ..+....++++
T Consensus 23 ~~~~~~~l~~tL~GH~~~V~~v~~sp~-----~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 23 MMTEQMTLRGTLKGHNGWVTQIATTPQ-----FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp ---CEEEEEEEECCCSSCEEEEEECTT-----CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred ccCCceEEEEEECCccCCEEEEEEeCC-----CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 344556677889999999999999997 257999999999999999977543 13445566888
Q ss_pred CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-eeeeccc
Q psy15191 99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLPCH 176 (312)
Q Consensus 99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-~~~~~~~ 176 (312)
+.++++++.|+.|++|+........ .. ..+...+..+.++++++++++++.|+.+++ |...... .....+|
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTR--RF-----VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE--EE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred CCEEEEEcccccceEEeecccceee--ee-----cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 9999999999999999998743222 22 245667888999999999999999999999 4332222 2233478
Q ss_pred CCceeEEEECCCC--CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 177 QLTITQLAFSPDD--THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 177 ~~~v~~~~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
...+..++|++++ .++++++.|+.|++||+++.+....+.. |...|++++|+|++++|++|+.||.|++||
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-------h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-------HTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-------CCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 8999999998864 5788999999999999998887776665 888999999999999999999999999999
Q ss_pred cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+.... ++..+. +...|.+++|+|++.++ +++. |+.|++|
T Consensus 244 ~~~~~------------~~~~~~-~~~~v~~~~~~~~~~~~-~~~~-----d~~i~iw 282 (340)
T 4aow_A 244 LNEGK------------HLYTLD-GGDIINALCFSPNRYWL-CAAT-----GPSIKIW 282 (340)
T ss_dssp TTTTE------------EEEEEE-CSSCEEEEEECSSSSEE-EEEE-----TTEEEEE
T ss_pred eccCc------------eeeeec-CCceEEeeecCCCCcee-eccC-----CCEEEEE
Confidence 98762 455555 45689999999987654 5533 4559988
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.7e-35 Score=244.77 Aligned_cols=244 Identities=13% Similarity=0.105 Sum_probs=194.5
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~ 103 (312)
|+..+++....+..| ..+....|+|+ +++|++|+.||.|++||+.++... .+..+.+++++.+|+
T Consensus 83 ~d~~~~~~~~~~~~~-~~~~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 155 (420)
T 3vl1_A 83 FNTIIRDGSKMLKRA-DYTAVDTAKLQ------MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI 155 (420)
T ss_dssp EECCSEETTTTSCSC-CEEEEEEECSS------SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE
T ss_pred EEecccceeeEEecC-CceEEEEEecC------CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE
Confidence 666666555555555 44455567777 899999999999999999877652 344556678888999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc---cC--
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC---HQ-- 177 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~---~~-- 177 (312)
+++.|+.|++||+.+.+.. .. +.+|...|.+++|+|++++|++++.|+.+++ |+++.+....+.. +.
T Consensus 156 s~s~d~~i~iwd~~~~~~~--~~-----~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 228 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKDGSNP--RT-----LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG 228 (420)
T ss_dssp EEETTSEEEEEETTTCCCC--EE-----EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC
T ss_pred EEeCCCeEEEEeCCCCcCc--eE-----EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC
Confidence 9999999999999875432 22 2378899999999999999999999999999 8877777776653 33
Q ss_pred -------------------CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 178 -------------------LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 178 -------------------~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
..+.+++|+|++++|++++.||.|++||+++.+....+... |...|++++|+|++
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 229 VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK------FTCSCNSLTVDGNN 302 (420)
T ss_dssp EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT------TSSCEEEEEECSSC
T ss_pred ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc------cCCCceeEEEeCCC
Confidence 44555566899999999999999999999988877666543 77889999999999
Q ss_pred c-eEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 239 R-YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 239 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+ +|++++.||.|++||+..+.. ++..+.+ |...|.++.| +++++|+++ +.||.|++|
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~v~~~~~-~~~~~l~s~-----~~d~~v~iw 361 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPEC-----------PVGEFLINEGTPINNVYF-AAGALFVSS-----GFDTSIKLD 361 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTS-----------CSEEEEESTTSCEEEEEE-ETTEEEEEE-----TTTEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCcC-----------chhhhhccCCCCceEEEe-CCCCEEEEe-----cCCccEEEE
Confidence 9 999999999999999988642 3556666 6677888855 688999999 556669998
No 76
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.6e-34 Score=240.57 Aligned_cols=255 Identities=18% Similarity=0.214 Sum_probs=196.8
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----------Ccc--------cccccccCCCCCc-e
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----------EGN--------YLPYHMRDDSKQL-H 101 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----------~~~--------~~~~~~~~~~~~~-~ 101 (312)
.....|.+.|++++|+|+ ++.+|++++.||.|++|++.. ... ..+..+.+++.+. +
T Consensus 122 ~~~~~h~~~v~~l~~~p~-----~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQ-----NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEESSCCSEEEEETT-----EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred EEEEcCCCcEEEEEECCC-----CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 455679999999999995 256899999999999999986 222 1334455667666 9
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccC---ceeeeeccc
Q psy15191 102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTW---KQIQTLPCH 176 (312)
Q Consensus 102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~---~~~~~~~~~ 176 (312)
|++++.||.|++|++...............+..|...|.+++|+| ++..+++++.++.|++ |+++. .....+..|
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 999999999999999874321111111223447888999999999 6788999999999999 77765 455566689
Q ss_pred CCceeEEEECCCCC-EEEEEecCCeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEE
Q psy15191 177 QLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVW 253 (312)
Q Consensus 177 ~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw 253 (312)
...|++++|+|++. +|++++.||.|++||++.. ..+..+.. |...|++++|+|+++ +|++++.||.|+||
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------CSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------CCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 99999999999887 6889999999999999973 44555554 788899999999995 68999999999999
Q ss_pred ecCCCCCCccccc--ccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191 254 GLGEPPTEEDLVQ--NTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 254 d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW 312 (312)
|+........... ....+.+..+.+|...|++++|+|+++ +|++++ .||.|+||
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s-----~dg~i~iw 406 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS-----EDNIMQVW 406 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEE
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE-----CCCCEEEe
Confidence 9987432111000 000126777888999999999999999 889995 45559998
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.9e-34 Score=259.47 Aligned_cols=239 Identities=16% Similarity=0.177 Sum_probs=205.6
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK 109 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~ 109 (312)
+..+.+.+|.+.|++++|+|+ +++|++++.||.|++||+.++... .+....+++++.+|++++.||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~------~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPT------EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSS------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred ccceeeecCCCceEEEEECCC------CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 456889999999999999999 999999999999999999887652 345556678888999999999
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC-ceeeeecccCCceeEEEECC
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW-KQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~-~~~~~~~~~~~~v~~~~~~~ 187 (312)
.|++||+.+++. .... .+|...|.+++|+|++++|++++.||.+++ |+.+. .....+.+|...|.+++|+|
T Consensus 78 ~i~vw~~~~~~~--~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 78 RIRVFNYNTGEK--VVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEEEETTTCCE--EEEE-----ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred eEEEEECCCCcE--EEEE-----ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 999999988542 2222 368889999999999999999999999999 76654 55666778999999999999
Q ss_pred -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccc
Q psy15191 188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDL 264 (312)
Q Consensus 188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 264 (312)
+++.|++++.||.|++||+.+......+... +...+..++|+| ++.+|++++.||.|++||+..+.
T Consensus 151 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~----- 219 (814)
T 3mkq_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS----- 219 (814)
T ss_dssp TEEEEEEEEETTSEEEEEETTCSSCSEEEECC------CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeEEecC------CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----
Confidence 8899999999999999999887776666543 447789999999 99999999999999999997763
Q ss_pred ccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.+|...|.+++|+|++++|++++.|+. |++|
T Consensus 220 -------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----v~vw 255 (814)
T 3mkq_A 220 -------CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-----LKIW 255 (814)
T ss_dssp -------EEEEEECCSSCEEEEEECSSSSEEEEEETTSC-----EEEE
T ss_pred -------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-----EEEE
Confidence 67788899999999999999999999965555 9998
No 78
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=240.75 Aligned_cols=255 Identities=14% Similarity=0.166 Sum_probs=184.1
Q ss_pred eEEEEcccc------------CcEEEEEEecCcCcCCCC--ceEEEecCCCcEEEeeecCCcc-----------------
Q psy15191 39 VLYTLTNHK------------SKVMAVKWVLNTSLDPEH--KDLVSCSLDKTAILWKYVSEGN----------------- 87 (312)
Q Consensus 39 ~~~~~~~h~------------~~v~~~~~~~~~~~~~~~--~~l~s~~~dg~i~vw~~~~~~~----------------- 87 (312)
....+.+|. ..|++++|+|+ + .+|++++.|+.|++||+..+..
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~------~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~ 146 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ------KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDP 146 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCC------CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------C
T ss_pred EecccccccccccccccccccCceEEEEEcCC------CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCc
Confidence 577888998 88999999998 6 7899999999999999875221
Q ss_pred -------------------------------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCC
Q psy15191 88 -------------------------------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGN 135 (312)
Q Consensus 88 -------------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~ 135 (312)
..+..+.+++++.+|+++ .|+.|++||+++... ..........+.+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 225 (447)
T 3dw8_B 147 TTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEEL 225 (447)
T ss_dssp CCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGC
T ss_pred ccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccccc
Confidence 234445567788899998 799999999984221 11111112235578
Q ss_pred ccceeEEEECCCC-CeEEEeecCCeEEE-ecccCce----eeeecccCC------------ceeEEEECCCCCEEEEEec
Q psy15191 136 TLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQ----IQTLPCHQL------------TITQLAFSPDDTHLVSVSR 197 (312)
Q Consensus 136 ~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~ 197 (312)
...|.+++|+|++ ++|++++.||.|++ |+++.+. ...+..|.. .|.+++|+|++++|++++.
T Consensus 226 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 226 TEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred CcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 8899999999998 99999999999999 8777765 566666665 8999999999999999998
Q ss_pred CCeEEEEEccC-CCeEEEEeccCCCCc--------ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccc-
Q psy15191 198 DRRWGLYKRQS-SGRLSLVACSDKTNG--------VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQN- 267 (312)
Q Consensus 198 d~~i~~wd~~~-~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 267 (312)
+.|++||++. .+.+..+........ .....+..++|+|++++|++|+.||.|++||+..+.........
T Consensus 306 -~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~ 384 (447)
T 3dw8_B 306 -LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRE 384 (447)
T ss_dssp -SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCST
T ss_pred -CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccc
Confidence 9999999987 666655554211000 00001335999999999999999999999999876421100000
Q ss_pred -----cccc--------------eeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191 268 -----TLWP--------------EVQKLYGHGYEIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 268 -----~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d 301 (312)
.... .......+...|..++|+|++++||+++.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~ 437 (447)
T 3dw8_B 385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN 437 (447)
T ss_dssp TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS
T ss_pred ccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecc
Confidence 0000 000011345678999999999999999644
No 79
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-33 Score=237.45 Aligned_cols=244 Identities=21% Similarity=0.364 Sum_probs=201.7
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~ 103 (312)
|+..+++.+..+.+|...|.+++| + +++|++|+.||.|++||+.+++... +....++ +..++
T Consensus 158 wd~~~~~~~~~~~~h~~~v~~l~~--~------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~ 227 (435)
T 1p22_A 158 WDKNTLECKRILTGHTGSVLCLQY--D------ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMV 227 (435)
T ss_dssp EESSSCCEEEEECCCSSCEEEEEC--C------SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEE
T ss_pred EeCCCCeEEEEEcCCCCcEEEEEE--C------CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEE
Confidence 899999999999999999999998 5 6799999999999999999887632 2223333 34899
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~ 182 (312)
+++.||.|++||+.+.+..... ....+|...|.+++| +++++++++.||.|++ |+++.+....+.+|...|.+
T Consensus 228 s~s~dg~i~vwd~~~~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 301 (435)
T 1p22_A 228 TCSKDRSIAVWDMASPTDITLR----RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 301 (435)
T ss_dssp EEETTSCEEEEECSSSSCCEEE----EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EeeCCCcEEEEeCCCCCCceee----eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEE
Confidence 9999999999999875533221 223478889999999 7889999999999999 98888888899999999999
Q ss_pred EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
+.+ +++++++++.||.|++||+++.+.+..+.. |...|.+++| ++.+|++|+.||.|++||+..+....
T Consensus 302 ~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 370 (435)
T 1p22_A 302 LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPR 370 (435)
T ss_dssp EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTT
T ss_pred EEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC-------CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 999 468999999999999999999888877765 7888999999 78899999999999999997653211
Q ss_pred ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.. ....++..+.+|.+.|.+++| ++++|+++ +.||.|++|
T Consensus 371 ~~---~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~-----s~Dg~i~iw 410 (435)
T 1p22_A 371 AP---AGTLCLRTLVEHSGRVFRLQF--DEFQIVSS-----SHDDTILIW 410 (435)
T ss_dssp SC---TTTTEEEEECCCSSCCCCEEE--CSSCEEEC-----CSSSEEEEE
T ss_pred cc---ccchheeeccCCCCCeEEEEe--CCCEEEEE-----eCCCEEEEE
Confidence 10 011157788899999999999 78899999 455559998
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=259.08 Aligned_cols=247 Identities=16% Similarity=0.295 Sum_probs=190.5
Q ss_pred EEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC--CceEEEEeC
Q psy15191 40 LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLSCSM 107 (312)
Q Consensus 40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~~~~ 107 (312)
+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+..+.. ..+..+.++++ +.++++++.
T Consensus 2 ~~~l~gH~~~V~~l~~s~d------g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYY------GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp ------CCCCEEEECCCSS------SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET
T ss_pred eeecccCcceeEEEEECCC------CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC
Confidence 4567899999999999999 89999999999999999974322 13344445555 789999999
Q ss_pred CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC--CCeEEEeecCCeEEE-ecccCc--eeeeecccCCceeE
Q psy15191 108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR--GDYIIAHGFQGSLHL-DVTTWK--QIQTLPCHQLTITQ 182 (312)
Q Consensus 108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~-d~~~~~--~~~~~~~~~~~v~~ 182 (312)
||.|++||+.+++...... ...|...|.+++|+|+ ++.+++++.||.|++ |+++.. ....+.+|...|.+
T Consensus 76 Dg~I~vwd~~~~~~~~~~~-----~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp TSCEEEEEEETTEEEEEEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred CCeEEEEECCCCccccccc-----ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 9999999998754222222 3478899999999999 999999999999999 655542 23334579999999
Q ss_pred EEECC-------------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC---CceEEEecc
Q psy15191 183 LAFSP-------------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD---SRYFLTISR 246 (312)
Q Consensus 183 ~~~~~-------------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~ 246 (312)
++|+| ++.++++++.||.|++||+++........... ..|...|++++|+|+ +++|++++.
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~---~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee---cCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999 58999999999999999999775332211110 118889999999999 899999999
Q ss_pred CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
||.|++||+..+..... ........|...|++++|+|+|++|++++.|+ .|++|
T Consensus 228 Dg~I~iwd~~~~~~~~~-------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vw 281 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWK-------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLW 281 (753)
T ss_dssp SSCEEEEEESSSSSCCB-------CCBSSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECC
T ss_pred CCEEEEecCCCCCCcce-------eEEeccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEE
Confidence 99999999987632111 02333456889999999999999999995554 49998
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.6e-34 Score=238.98 Aligned_cols=242 Identities=13% Similarity=0.105 Sum_probs=192.7
Q ss_pred eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc------c--------cccccccCCCC----C-
Q psy15191 39 VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG------N--------YLPYHMRDDSK----Q- 99 (312)
Q Consensus 39 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~------~--------~~~~~~~~~~~----~- 99 (312)
....+.+|.+.|++++|+|. +|++|+.||.|++||+.+++ . ..+..+.+.++ +
T Consensus 8 ~~~~~~~h~~~i~~~~~~~~--------~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACNS--------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp EEEESSCSSSCEEEEEECSS--------EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhhhhhhcCeEEEEecCC--------eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence 45678899999999999775 99999999999999999887 2 12344445566 7
Q ss_pred --ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC-----ccceeEEEEC----CCCCe-EEEeecCCeEEE-eccc
Q psy15191 100 --LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN-----TLGFYGCKFG----PRGDY-IIAHGFQGSLHL-DVTT 166 (312)
Q Consensus 100 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~~~~i~~-d~~~ 166 (312)
.+|++++.|+.|++||+.+.+... ......+..| ...|.+++|+ |++++ |++++.||.|++ |+++
T Consensus 80 ~~~~l~s~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 80 ELCLVATTSFSGDLLFYRITREDETK--KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEEETTSCEEEEEEEECTTTC--CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred cccEEEEEcCCCCEEEEEccCCcccc--cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 899999999999999998754310 0011222345 5889999999 99999 999999999999 6665
Q ss_pred ------Cceee-----ee-------cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc---
Q psy15191 167 ------WKQIQ-----TL-------PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH--- 225 (312)
Q Consensus 167 ------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~--- 225 (312)
.+... .+ ..|...|.+++|+|++ +|++++.|+.|++||+++.+.+..+..... |
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----h~~~ 232 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS----MINN 232 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------CC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccc----cccc
Confidence 44333 55 3478899999999999 999999999999999998877776664111 4
Q ss_pred ceeeEEEEEcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeec-------------cCcceeEEEec
Q psy15191 226 KRIIWGVAWSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-------------HGYEIYSLAAS 289 (312)
Q Consensus 226 ~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~s 289 (312)
...|.+++|+|++++|++++.| |.|++||+..+. .+..+.+ |...|.+++|+
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC------------EEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc------------ccceeccCcccccccccccccCCcEEEEEEC
Confidence 6789999999999999999999 999999998763 5677777 99999999999
Q ss_pred cCCCeEEEEecCCCcccceEEeC
Q psy15191 290 HDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 290 ~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|++++|++++.| |.|++|
T Consensus 301 ~~~~~l~~~~~d-----g~i~iw 318 (397)
T 1sq9_A 301 DSGETLCSAGWD-----GKLRFW 318 (397)
T ss_dssp SSSSEEEEEETT-----SEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEE
Confidence 999999999554 559998
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-34 Score=243.28 Aligned_cols=249 Identities=12% Similarity=0.123 Sum_probs=185.5
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCC-CCceEEEE
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDS-KQLHLLSC 105 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~-~~~~l~~~ 105 (312)
.+......+|...|++|+|+|. ++++||+|+.||.|+|||+.++.. ..+..+.++| ++.+|+++
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~-----~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~ 183 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPT-----HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS 183 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSS-----CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred eeecccCCCCCCCEEEEEEeCC-----CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE
Confidence 3445667789999999999995 257899999999999999987653 1344455565 56799999
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
+.|++|++||+++....... ....+...+.+++|+|++++|++|+.||.|++ |++. +....+.+|...|.+++
T Consensus 184 s~D~~v~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 184 SMEGTTRLQDFKGNILRVFA-----SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVA 257 (435)
T ss_dssp CSSSCEEEEETTSCEEEEEE-----CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEE
T ss_pred eCCCEEEEeeccCCceeEEe-----ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeee
Confidence 99999999999864322111 11234556788999999999999999999999 5543 34455668999999999
Q ss_pred ECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191 185 FSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED 263 (312)
Q Consensus 185 ~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 263 (312)
|+|++. +|++++.|+.|++||+++.+....+.. ...|...|++++|+|++++|++++.||.|+|||+..+..
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~--- 330 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC--- 330 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS---
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEE----eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc---
Confidence 999876 788999999999999987654322211 112888999999999999999999999999999987642
Q ss_pred cccccccceeEEeeccCc------ceeEEEeccCCCeEEEEecCCC-------cccceEEeC
Q psy15191 264 LVQNTLWPEVQKLYGHGY------EIYSLAASHDGTLLASACKATK-------PEHAAIIIW 312 (312)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~s~d~~-------~~dg~i~iW 312 (312)
...+..|.. .+....|+|++.++++++.+.. .+++.|++|
T Consensus 331 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iw 383 (435)
T 4e54_B 331 ---------PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVF 383 (435)
T ss_dssp ---------EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEE
T ss_pred ---------ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEE
Confidence 333333321 2345678888887777753221 234568777
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=225.15 Aligned_cols=234 Identities=18% Similarity=0.214 Sum_probs=192.7
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d 108 (312)
.++...+.+|.+.|++++| |+ +.+|++++.||.|++||+.++... .+..+.+++++.++++++.|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VD------DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EE------TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred HHHHHHhhCCCCCcEEEEe-cC------CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 4788899999999999999 88 889999999999999999877642 34445567788899999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECC
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP 187 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~ 187 (312)
+.|++|++....... ....+..|...+.+++| +++.+++++.|+.+++ | ..+....+..|...+.+++|+|
T Consensus 81 g~i~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 81 TMINGVPLFATSGED----PLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp SCEEEEETTCCTTSC----C-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred CeEEEEEeeecCCCC----cccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence 999999988643211 12223478889999999 6789999999999999 5 3445556668999999999998
Q ss_pred -CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc
Q psy15191 188 -DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ 266 (312)
Q Consensus 188 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 266 (312)
+++++++++.|+.|++||. .+....+... +...+.+++|+|++. +++++.||.|++||+..+.
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~------~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~------- 216 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQN--DKVIKTFSGI------HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD------- 216 (313)
T ss_dssp TTTTEEEEEETTSCEEEEET--TEEEEEECSS------CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-------
T ss_pred CCCCEEEEEECCCCEEEEec--CceEEEEecc------CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-------
Confidence 9999999999999999993 3334444332 677899999999998 9999999999999998763
Q ss_pred ccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.+|...|++++|+|++ .|++++. ||.|++|
T Consensus 217 -----~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-----dg~v~iw 251 (313)
T 3odt_A 217 -----VLRTYEGHESFVYCIKLLPNG-DIVSCGE-----DRTVRIW 251 (313)
T ss_dssp -----EEEEEECCSSCEEEEEECTTS-CEEEEET-----TSEEEEE
T ss_pred -----hhhhhhcCCceEEEEEEecCC-CEEEEec-----CCEEEEE
Confidence 678888999999999999999 6889954 4559998
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-33 Score=255.35 Aligned_cols=236 Identities=14% Similarity=0.166 Sum_probs=200.2
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~ 103 (312)
|+..+++.+..+.+|..+|++++|+|+ +++|++++.||.|++||+.+++.. .+....+++++.+++
T Consensus 40 wd~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 113 (814)
T 3mkq_A 40 WNYETQVEVRSIQVTETPVRAGKFIAR------KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL 113 (814)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEEEGG------GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EECCCCceEEEEecCCCcEEEEEEeCC------CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEE
Confidence 555567788899999999999999999 899999999999999999887752 345566788888999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeeccc-CCce
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH-QLTI 180 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~-~~~v 180 (312)
+++.||.|++||+.+.. .... .+.+|...|.+++|+| +++.+++++.||.|++ |+.+......+..+ ...+
T Consensus 114 ~~~~dg~i~vw~~~~~~-~~~~-----~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 114 SGSDDLTVKLWNWENNW-ALEQ-----TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp EEETTSEEEEEEGGGTS-EEEE-----EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred EEcCCCEEEEEECCCCc-eEEE-----EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 99999999999998642 1112 2236888999999999 8899999999999999 76666655555544 4889
Q ss_pred eEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 181 TQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 181 ~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
..++|+| ++.+|++++.||.|++||+++.+....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999 999999999999999999998887777765 7788999999999999999999999999999876
Q ss_pred CCCcccccccccceeEEeeccCcceeEEEeccCCC--eEEEE
Q psy15191 259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT--LLASA 298 (312)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~ 298 (312)
. .+..+..|...+.+++|+|++. +++++
T Consensus 261 ~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 290 (814)
T 3mkq_A 261 K------------VEKTLNVGLERSWCIATHPTGRKNYIASG 290 (814)
T ss_dssp S------------EEEEECCSSSSEEEEEECTTCGGGEEEEE
T ss_pred c------------EEEEeecCCCcEEEEEEccCCCceEEEEE
Confidence 3 6778888999999999999987 45555
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-33 Score=228.25 Aligned_cols=231 Identities=19% Similarity=0.253 Sum_probs=190.0
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCC
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDK 109 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~ 109 (312)
.....+.+|.+.|++++|+|+ +++|++++.||.|++||+.+++.. .+..+.+++++.+|++++.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKE------GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTT------SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred cccEEEEEeeceEEEEEEcCC------CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 345668899999999999999 999999999999999999887652 344455677888999999999
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-----CeEEE-ecccCce-----------eee
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-----GSLHL-DVTTWKQ-----------IQT 172 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~-d~~~~~~-----------~~~ 172 (312)
.|++||+.+.+.. .... +...+.+++|+|+++++++++.+ +.+.+ |+.+... ...
T Consensus 97 ~i~iwd~~~~~~~--~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 97 SIKLWDVSNGQCV--ATWK------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EEEEEETTTCCEE--EEEE------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred eEEEEECCCCcEE--EEee------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 9999999885432 2222 56679999999999999999998 99999 5444322 222
Q ss_pred ecccCC--ceeEEEECCCCCEEEEEecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe
Q psy15191 173 LPCHQL--TITQLAFSPDDTHLVSVSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV 249 (312)
Q Consensus 173 ~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 249 (312)
+..|.. .+.+++|+|++++|++++.||.|++||+++ ......+.. |...|.+++|+|++++|++++.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-------HEKSISDMQFSPDLTYFITSSRDTN 241 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-------CSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-------CCCceeEEEECCCCCEEEEecCCce
Confidence 234555 899999999999999999999999999998 455555554 7788999999999999999999999
Q ss_pred EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 250 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
|++||+..+. .+..+. +...+..++|+|+++++++++.++
T Consensus 242 i~v~d~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 242 SFLVDVSTLQ------------VLKKYE-TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEETTTCC------------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEECCCCc------------eeeeec-CCCCceeEEecCCCceEEEeecCC
Confidence 9999998763 444444 788899999999999999997655
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=240.53 Aligned_cols=243 Identities=14% Similarity=0.149 Sum_probs=181.6
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-------------------------------ccccccc
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-------------------------------YLPYHMR 94 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-------------------------------~~~~~~~ 94 (312)
|.+.|++++|+|+ +++||+|+.||.|+|||+.++.. ..+..+.
T Consensus 27 ~~~~V~~v~~s~~------g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 27 EADIISTVEFNHS------GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGGSEEEEEECSS------SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred ccCcEEEEEECCC------CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 6789999999999 99999999999999999987651 1144455
Q ss_pred CCCCC--ceEEEEeCCCcEEEEcCCCCcceee--------------------------------e-eeeecccCCCccce
Q psy15191 95 DDSKQ--LHLLSCSMDKSIIVWAPDPTTGLWL--------------------------------E-TARVGEVGGNTLGF 139 (312)
Q Consensus 95 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~--------------------------------~-~~~~~~~~~~~~~v 139 (312)
+.+++ ..+++++.|+.|++||+.+...... . ........+|...|
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 56666 6899999999999999875322100 0 00001135788999
Q ss_pred eEEEECCCCCeEEEeecCCeEEE-eccc-Cceee-------eecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCC
Q psy15191 140 YGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQ-------TLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSS 209 (312)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~ 209 (312)
.+++|+|++++|+++ .|+.|++ |+++ ..... .+.+|...|.+++|+|++ ++|++++.||.|++||+++.
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 999999999999998 7999999 5542 22222 244789999999999998 99999999999999999987
Q ss_pred Ce----EEEEeccCCCC-----cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC
Q psy15191 210 GR----LSLVACSDKTN-----GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG 280 (312)
Q Consensus 210 ~~----~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (312)
+. ...+....... ..|...|.+++|+|++++|++++. +.|++||+..... ++..+.+|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~-----------~~~~~~~~~ 327 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR-----------PVETYQVHE 327 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS-----------CSCCEESCG
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc-----------ccceeeccc
Confidence 75 45555421100 002238999999999999999999 9999999986321 455566665
Q ss_pred cc---------------eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 281 YE---------------IYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 281 ~~---------------v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.. +..++|+|++++|++|+ .||.|++|
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-----~dg~v~iw 369 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-----YNNFFRMF 369 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-----STTEEEEE
T ss_pred cccccccccccccccccceEEEECCCCCEEEEec-----cCCEEEEE
Confidence 32 23499999999999994 55559998
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=231.69 Aligned_cols=240 Identities=11% Similarity=0.109 Sum_probs=186.8
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCc-eEEEecC---CCcEEEeeecCCccc---------ccccccCCCC---CceEEE
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSL---DKTAILWKYVSEGNY---------LPYHMRDDSK---QLHLLS 104 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~---dg~i~vw~~~~~~~~---------~~~~~~~~~~---~~~l~~ 104 (312)
..+++|...|++++|+|+ +. ++++|+. |+.|++||+.+++.. .+..+.++++ +.++++
T Consensus 12 ~~~~~h~~~v~~~~~~p~------~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPC------SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp EEEEECSSCEEEEEECTT------SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred hhccCCCCceEEEEEcCC------CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 455789999999999998 64 5566766 999999999987652 3344455565 689999
Q ss_pred EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEE------ECCCCCeEEEeecCCeEEE-ecccCc-eeeeeccc
Q psy15191 105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK------FGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLPCH 176 (312)
Q Consensus 105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~~~ 176 (312)
++.|+.|++||+.+.+. . ...+.+|...|.++. |+|++++|++++.|+.+++ |+++.+ ....+..|
T Consensus 86 ~~~dg~i~iwd~~~~~~-~-----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEM-P-----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp EETTSCEEEECTTSCSS-C-----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred ecCCCeEEEEeCCCCCc-c-----EEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 99999999999987541 1 122347888999995 5789999999999999999 666655 45555444
Q ss_pred CC----ceeEEE----ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC---CCceEEEec
Q psy15191 177 QL----TITQLA----FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH---DSRYFLTIS 245 (312)
Q Consensus 177 ~~----~v~~~~----~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~ 245 (312)
.+ .+.+++ |+|++++|++++.|+.|++||+++.+...... +...|.+++|+| ++.+|++++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN--------IKNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEESCSSSSCCEEEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC--------CCCceEEEEcCCCCCCCCEEEEEC
Confidence 43 788888 78999999999999999999999877654433 778899999999 999999999
Q ss_pred cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191 246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW 312 (312)
.||.|++||+......... ....+.+|...|++++|+|+++ +|++++. ||.|++|
T Consensus 232 ~dg~i~i~d~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iw 287 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGF-------ASVSEKAHKSTVWQVRHLPQNRELFLTAGG-----AGGLHLW 287 (357)
T ss_dssp STTEEEEEEEEEEETTTEE-------EEEEEECCSSCEEEEEEETTEEEEEEEEET-----TSEEEEE
T ss_pred CCCeEEEEeCcCCCcccce-------eeeccCCCcCCEEEEEECCCCCcEEEEEeC-----CCcEEEe
Confidence 9999999999875322111 1224558999999999999998 8999954 5559998
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-34 Score=232.92 Aligned_cols=249 Identities=12% Similarity=0.131 Sum_probs=191.3
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-Ccc---------cccccccCCCCCce
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-EGN---------YLPYHMRDDSKQLH 101 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-~~~---------~~~~~~~~~~~~~~ 101 (312)
++....+.+..+.+|.+.|++++|+|+ ..+|++|++|+.||.|++||+.+ +.. ..+..+.+++++.+
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPP---TLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSK 100 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCT---TSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCC---CCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCE
Confidence 455567788899999999999999998 11148999999999999999987 333 13445566788889
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE--CCCCCeEEEeecCCeEEE-ecccCceeeeecccC-
Q psy15191 102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF--GPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ- 177 (312)
Q Consensus 102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~- 177 (312)
|++++.||.|++||+.+.+.. . ...|...|.+++| +|++++|++++.|+.|++ |+++.+....+..+.
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~--~------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 172 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAI--Q------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER 172 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEE--E------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred EEEEcCCCcEEEEEcCCCCce--e------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence 999999999999999985422 1 1257889999999 999999999999999999 766665554443221
Q ss_pred ----------------------------------------CceeEEEECCCCCE----EEEEecCCeEEEEEccCCC---
Q psy15191 178 ----------------------------------------LTITQLAFSPDDTH----LVSVSRDRRWGLYKRQSSG--- 210 (312)
Q Consensus 178 ----------------------------------------~~v~~~~~~~~~~~----l~~~~~d~~i~~wd~~~~~--- 210 (312)
..+.++.+.++... +++++.||.|++||++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~ 252 (368)
T 3mmy_A 173 CYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK 252 (368)
T ss_dssp EEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHH
T ss_pred ceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccc
Confidence 23344444444333 8999999999999998763
Q ss_pred eEEEEeccCCC-----CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191 211 RLSLVACSDKT-----NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285 (312)
Q Consensus 211 ~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (312)
....+...... ...|...|++++|+|++++|++++.||.|++||+.++. ++..+.+|...|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART------------KLKTSEQLDQPISA 320 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE------------EEEECCCCSSCEEE
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc------------EEEEecCCCCCceE
Confidence 33444431110 00122379999999999999999999999999998763 67888899999999
Q ss_pred EEeccCCCeEEEEecCCC
Q psy15191 286 LAASHDGTLLASACKATK 303 (312)
Q Consensus 286 ~~~s~~~~~l~s~s~d~~ 303 (312)
++|+|+|++|++++.|+.
T Consensus 321 ~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp EEECTTSSCEEEEECCCS
T ss_pred EEECCCCCeEEEEecccc
Confidence 999999999999987754
No 89
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-34 Score=257.19 Aligned_cols=159 Identities=13% Similarity=0.141 Sum_probs=121.1
Q ss_pred CCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceee--ee----c-----ccCCceeEEEECCCCCEEEEEecCCeE
Q psy15191 134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ--TL----P-----CHQLTITQLAFSPDDTHLVSVSRDRRW 201 (312)
Q Consensus 134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~--~~----~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i 201 (312)
+|...+.+++|+|++++|++|+.|+.|++ |+.+..+.. .+ . +|...|.+++|+||+++|++|+.||+|
T Consensus 433 G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV 512 (902)
T 2oaj_A 433 GGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDV 512 (902)
T ss_dssp CSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred CCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEE
Confidence 34444555677899999999999999999 554443221 11 1 688899999999999999999999999
Q ss_pred EEEEccCCCe---------------------------------------------EEEEeccCCCCcccceeeEEEEEcC
Q psy15191 202 GLYKRQSSGR---------------------------------------------LSLVACSDKTNGVHKRIIWGVAWSH 236 (312)
Q Consensus 202 ~~wd~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (312)
++||+.+.+. +..+. .|...|++++|+|
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-------~h~~~V~svafSp 585 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-------ANKGKTSAINNSN 585 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-------CCSCSEEEEEECB
T ss_pred EEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-------cCCCcEEEEEecC
Confidence 9999986532 11111 1888999999999
Q ss_pred CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-ccCcceeEEEec-----cCC---CeEEEEecCCCcccc
Q psy15191 237 DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAAS-----HDG---TLLASACKATKPEHA 307 (312)
Q Consensus 237 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-----~~~---~~l~s~s~d~~~~dg 307 (312)
+| +||+|+.|+.|++||+..+..... ..+..+. +|...|++++|+ ||| ++|++|+.| +
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~-------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D-----~ 652 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYM-------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM-----G 652 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEE-------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT-----S
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEE-------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC-----C
Confidence 99 999999999999999876521000 0012343 899999999999 885 899999554 5
Q ss_pred eEEeC
Q psy15191 308 AIIIW 312 (312)
Q Consensus 308 ~i~iW 312 (312)
+|++|
T Consensus 653 tv~~w 657 (902)
T 2oaj_A 653 EVITY 657 (902)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 59998
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.1e-33 Score=234.03 Aligned_cols=246 Identities=14% Similarity=0.113 Sum_probs=194.6
Q ss_pred EeCCCC----ceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCc-------c--------cccc
Q psy15191 32 WNGEGG----KVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEG-------N--------YLPY 91 (312)
Q Consensus 32 w~~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~-------~--------~~~~ 91 (312)
|+.... +.+..+.+|.+.|++++|+| + +++|++|+.||.|++||+.++. . ..+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~------~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 62 LPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN------DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp EETTCCEECCTTCCCBCCCSSCEEEEEECTTC------TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred EECccCCCCCCCCceEecCCCCEEEEEeCCCC------CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 776543 34566889999999999999 7 8899999999999999998863 2 1344
Q ss_pred cccCCCCC-ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce
Q psy15191 92 HMRDDSKQ-LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ 169 (312)
Q Consensus 92 ~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~ 169 (312)
.+.+++++ .++++++.|+.|++||+++.+ ...... ...|...|.+++|+|++++|++++.|+.|++ |+++.+.
T Consensus 136 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLG---PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp EEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEEC---TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred EEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEe---cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 45567776 589999999999999999743 222220 1368889999999999999999999999999 8888888
Q ss_pred eeee-cccCCc-eeEEEECCCCCEEEEE---ecCCeEEEEEccCCCe-EEEEeccCCCCcccceeeEEEEEcCCCceEE-
Q psy15191 170 IQTL-PCHQLT-ITQLAFSPDDTHLVSV---SRDRRWGLYKRQSSGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFL- 242 (312)
Q Consensus 170 ~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~- 242 (312)
...+ ..|.+. +..+.|+|++++|+++ +.|+.|++||+++.+. ....... +...+.+++|+|++++|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD------TSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC------CCSSCEEEEEETTTTEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc------CCCceeEEEEcCCCCEEEE
Confidence 8777 677765 8999999999999999 7999999999998654 3222221 566799999999999986
Q ss_pred EeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++.||.|++||+..+.. .+..+.. |...|.+++|+|++.+++++ ++.+++|
T Consensus 285 ~g~~dg~i~i~d~~~~~~-----------~~~~l~~~~~~~~v~~~~~sp~~~~~~s~-------~~~~~~~ 338 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSEAP-----------FLHYLSMFSSKESQRGMGYMPKRGLEVNK-------CEIARFY 338 (402)
T ss_dssp EETTCSCEEEEEECSSTT-----------CEEEEEEECCSSCCSEEEECCGGGSCGGG-------TEEEEEE
T ss_pred EEcCCCeEEEEEecCCCc-----------ceEeecccccCCcccceEEecccccceec-------ceeEEEE
Confidence 556799999999987642 1333333 56899999999999987754 2347776
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.7e-33 Score=260.93 Aligned_cols=259 Identities=18% Similarity=0.301 Sum_probs=214.4
Q ss_pred EEEeccCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcE
Q psy15191 17 LYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTA 77 (312)
Q Consensus 17 ~~~~~~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i 77 (312)
...+.+|.+.|++++ |+..+++.+..+.+|...|.+++|+|+ +++|++++.||.|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~------~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSD------DSYIATCSADKKV 681 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT------SSEEEEEETTSEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecC------CCEEEEEeCCCeE
Confidence 345677888888777 555557788899999999999999999 9999999999999
Q ss_pred EEeeecCCccc--------ccccccCCC--CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC
Q psy15191 78 ILWKYVSEGNY--------LPYHMRDDS--KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR 147 (312)
Q Consensus 78 ~vw~~~~~~~~--------~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 147 (312)
++||+.+++.. .+....+.+ +...+++++.|+.|++||+.+++ .... +.+|...|.+++|+|+
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~-----~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNT-----MFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEE-----ECCCSSCEEEEEECSS
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhhe-----ecCCCCCEEEEEEecC
Confidence 99999987753 223333444 55589999999999999998854 2222 2378899999999999
Q ss_pred CCeEEEeecCCeEEE-ecccCceeeeec-------------ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEE
Q psy15191 148 GDYIIAHGFQGSLHL-DVTTWKQIQTLP-------------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLS 213 (312)
Q Consensus 148 ~~~l~~~~~~~~i~~-d~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 213 (312)
++++++++.||.|++ |+.+.+....+. .+...+.+++|+|+++.+++++ ++.+.+||+.+.....
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLA 833 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCcee
Confidence 999999999999999 666655444432 1234788999999999999887 7899999999988877
Q ss_pred EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191 214 LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 293 (312)
.+... |...|.+++|+|+++++++++.||.|++||+.++. .+..+.+|...|.+++|+|+|+
T Consensus 834 ~~~~~------~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~------------~~~~~~~h~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 834 EIHTG------HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL------------KVADCRGHLSWVHGVMFSPDGS 895 (1249)
T ss_dssp EEECS------SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE------------EEEEECCCSSCEEEEEECTTSS
T ss_pred EEcCC------CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc------------eeeecCCCccceEEEEECCCCC
Confidence 76543 77889999999999999999999999999998763 6778889999999999999999
Q ss_pred eEEEEecCCCcccceEEeC
Q psy15191 294 LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 294 ~l~s~s~d~~~~dg~i~iW 312 (312)
+|++++.|+. |++|
T Consensus 896 ~l~s~s~dg~-----v~vw 909 (1249)
T 3sfz_A 896 SFLTASDDQT-----IRVW 909 (1249)
T ss_dssp EEEEEETTSC-----EEEE
T ss_pred EEEEEeCCCe-----EEEE
Confidence 9999966555 9998
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-33 Score=229.71 Aligned_cols=237 Identities=13% Similarity=0.072 Sum_probs=189.7
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----c-------cccccccCCCCCc-eEEEEeCC
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----N-------YLPYHMRDDSKQL-HLLSCSMD 108 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~-------~~~~~~~~~~~~~-~l~~~~~d 108 (312)
....+|.+.|++++|+|+ +++|++++.|+.|++|++.++. . ..+..+.+.+++. ++++++.|
T Consensus 5 ~~~~~h~~~v~~~~~s~~------~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 78 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPS------KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp ECSSCCSSCEEEEEEEGG------GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred ecccCCCCcEEEEEEcCC------CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC
Confidence 345689999999999999 8999999999999999998877 2 2344455667888 89999999
Q ss_pred CcEEEEcC-CCCcceeeeeeeecccCC--CccceeEEEECCCCCeEEEeecCCeEEE-eccc---------Cceeeeecc
Q psy15191 109 KSIIVWAP-DPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT---------WKQIQTLPC 175 (312)
Q Consensus 109 ~~i~i~d~-~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~---------~~~~~~~~~ 175 (312)
|.|++||+ .+.+. ..+.. |...|.+++|+| ++.+++++.|+.|++ |+++ .+....+.
T Consensus 79 g~i~~wd~~~~~~~--------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 79 GEILKVDLIGSPSF--------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp SCEEEECSSSSSSE--------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred CeEEEEEeccCCce--------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence 99999999 76432 12235 888999999999 999999999999999 6665 55455555
Q ss_pred cCCceeEEEECCCCCEEEEEecCCeEEEEEccC-CCeE-EEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEE
Q psy15191 176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS-SGRL-SLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVV 252 (312)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i 252 (312)
|...+.+++|+|++ +++++.|+.|++||+++ .... ...... +...+.+++|+| ++++|++++.||.|++
T Consensus 149 ~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 220 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESG------LKYQIRDVALLPKEQEGYACSSIDGRVAV 220 (342)
T ss_dssp SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECS------CSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecC------CCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence 88999999999887 99999999999999987 4432 222221 677899999999 9999999999999999
Q ss_pred EecCCCCCCcccccccccceeEEeeccCc---------ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGY---------EIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|++........ .+....+..|.. .|.+++|+|++++|++++.|+. |++|
T Consensus 221 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~vw 278 (342)
T 1yfq_A 221 EFFDDQGDDYN------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-----ISCW 278 (342)
T ss_dssp EECCTTCCSTT------CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----EEEE
T ss_pred EEEcCCCcccc------cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-----EEEE
Confidence 99977611000 014556666654 9999999999999999965555 9998
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.7e-33 Score=226.27 Aligned_cols=240 Identities=11% Similarity=0.103 Sum_probs=186.4
Q ss_pred EEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeee-cCCcccc---------cccccCCCCCceEEEEeCC
Q psy15191 40 LYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKY-VSEGNYL---------PYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 40 ~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~-~~~~~~~---------~~~~~~~~~~~~l~~~~~d 108 (312)
...+.+|...|++++|+|+ ++ +|++|+.||.|++||+ .+++... +..+.+.+ +..+++++.|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d 121 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDN------TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD 121 (342)
T ss_dssp EEEEEECSSCEEEEEEEES------SSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT
T ss_pred ceeeeecCCceEEEEECCC------CCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC
Confidence 4556689999999999999 99 9999999999999999 7655421 22333455 7799999999
Q ss_pred CcEEEEcCCCCccee--eeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-eccc-Cc--eeeeecccCCceeE
Q psy15191 109 KSIIVWAPDPTTGLW--LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTT-WK--QIQTLPCHQLTITQ 182 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~--~~~~~~~~~~~v~~ 182 (312)
+.|++||+++..... ........+ .+...+.+++|+|++ +++++.++.+++ |+++ .. .......|...+.+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 198 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD 198 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE
T ss_pred CeEEEEcccccccccccccCCeeeEE-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeE
Confidence 999999987411000 001111222 377889999999988 999999999999 6665 33 22233468889999
Q ss_pred EEECC-CCCEEEEEecCCeEEEEEccCC------CeEEEEeccCCCC--cccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191 183 LAFSP-DDTHLVSVSRDRRWGLYKRQSS------GRLSLVACSDKTN--GVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253 (312)
Q Consensus 183 ~~~~~-~~~~l~~~~~d~~i~~wd~~~~------~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 253 (312)
++|+| +++++++++.||.|++|+++.. +....+....... ..|...|.+++|+|++++|++++.||.|++|
T Consensus 199 i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278 (342)
T ss_dssp EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEE
Confidence 99999 9999999999999999999876 5566665532110 0134589999999999999999999999999
Q ss_pred ecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
|+.++. .+..+.+| ...|.+++ |++++|++++.|+.
T Consensus 279 d~~~~~------------~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 279 NLQTRK------------KIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ETTTTE------------EEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cCccHh------------HhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 998763 67788888 99999999 99999999977664
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-33 Score=227.11 Aligned_cols=211 Identities=19% Similarity=0.294 Sum_probs=163.7
Q ss_pred EeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC-
Q psy15191 32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK- 98 (312)
Q Consensus 32 w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~- 98 (312)
|+..+++ ++..+.+|.++|++++|+|. .++++|++|+.|++|++||++++.. ..+..+.++|+
T Consensus 40 wd~~~~~~~~~~~l~gH~~~V~~v~~~~~----~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 40 FDVRNGGQILIADLRGHEGPVWQVAWAHP----MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD 115 (316)
T ss_dssp EEEETTEEEEEEEEECCSSCEEEEEECCG----GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT
T ss_pred EEecCCCcEEEEEEcCCCccEEEEEeCCC----CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC
Confidence 4444443 46778999999999999863 2378999999999999999987632 12334445555
Q ss_pred -CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC-----------------CCeEEEeecCCeE
Q psy15191 99 -QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR-----------------GDYIIAHGFQGSL 160 (312)
Q Consensus 99 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~~~~i 160 (312)
+.+|++++.|+.|++||++...... ......+|...+.+++|+|+ +++|++++.|+.|
T Consensus 116 ~g~~lasgs~D~~i~lwd~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v 191 (316)
T 3bg1_A 116 YGLILACGSSDGAISLLTYTGEGQWE----VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLI 191 (316)
T ss_dssp TCSCEEEECSSSCEEEEEECSSSCEE----ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBC
T ss_pred CCcEEEEEcCCCCEEEEecCCCCCcc----eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeE
Confidence 6789999999999999998642111 11233578888999999997 4789999999999
Q ss_pred EE-eccc---CceeeeecccCCceeEEEECCCC----CEEEEEecCCeEEEEEccCCC----eEEEEeccCCCCccccee
Q psy15191 161 HL-DVTT---WKQIQTLPCHQLTITQLAFSPDD----THLVSVSRDRRWGLYKRQSSG----RLSLVACSDKTNGVHKRI 228 (312)
Q Consensus 161 ~~-d~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~ 228 (312)
++ |.++ +.....+.+|...|.+++|+|++ ++|++++.|++|++||+.+.. ....+.. |...
T Consensus 192 ~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-------~~~~ 264 (316)
T 3bg1_A 192 KLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK-------FNDV 264 (316)
T ss_dssp CEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE-------CSSC
T ss_pred EEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc-------CCCc
Confidence 99 5542 23455667899999999999986 789999999999999987631 1112222 6778
Q ss_pred eEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191 229 IWGVAWSHDSRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 229 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 257 (312)
|.+++|+|++++||+++.|+.|++|+...
T Consensus 265 v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 265 VWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999999999999999999999999754
No 95
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.6e-32 Score=227.92 Aligned_cols=232 Identities=20% Similarity=0.325 Sum_probs=194.4
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLL 103 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~ 103 (312)
|+..+++.+..+.+|...|++++|+++ +|++|+.||+|++||+.+++... +....+ ++..++
T Consensus 144 wd~~~~~~~~~~~~h~~~v~~~~~~~~--------~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~ 213 (445)
T 2ovr_B 144 WSAVTGKCLRTLVGHTGGVWSSQMRDN--------IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVV 213 (445)
T ss_dssp EETTTCCEEEECCCCSSCEEEEEEETT--------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEecCC--------EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEE
Confidence 888899999999999999999999744 89999999999999998876532 222222 345899
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeE
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~ 182 (312)
+++.|+.|++||+.+.+. .... .+|...+.++++ +++.+++++.||.|++ |.++.+....+.+|...|.+
T Consensus 214 s~s~dg~i~~wd~~~~~~--~~~~-----~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 214 SGSRDATLRVWDIETGQC--LHVL-----MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 284 (445)
T ss_dssp EEETTSEEEEEESSSCCE--EEEE-----ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEE
T ss_pred EEeCCCEEEEEECCCCcE--EEEE-----cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEE
Confidence 999999999999987442 2222 368889999999 7889999999999999 88888888888899999999
Q ss_pred EEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 183 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
++| ++.++++++.|+.|++||+++.+....+.. |...+.++.+ ++++|++++.||.|++||+.++.
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~--- 350 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-------HQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ--- 350 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-------CCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC---
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-------CcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc---
Confidence 999 789999999999999999999888877665 6677887777 56799999999999999998763
Q ss_pred ccccccccceeEEeec---cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYG---HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.+ |...|++++|+ +++|++|+. ||.|++|
T Consensus 351 ---------~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~-----dg~v~iw 387 (445)
T 2ovr_B 351 ---------CLQTLQGPNKHQSAVTCLQFN--KNFVITSSD-----DGTVKLW 387 (445)
T ss_dssp ---------EEEEECSTTSCSSCEEEEEEC--SSEEEEEET-----TSEEEEE
T ss_pred ---------EEEEEccCCCCCCCEEEEEEC--CCEEEEEeC-----CCeEEEE
Confidence 5666665 88899999996 579999954 5559998
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-33 Score=230.96 Aligned_cols=254 Identities=15% Similarity=0.208 Sum_probs=193.2
Q ss_pred EEccccCcEEEEEEecCcCcCC-CCceEEEecCCCcEEEeeecCCccc-------------ccccccCCCC----CceEE
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDP-EHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDDSK----QLHLL 103 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~-~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~~~----~~~l~ 103 (312)
...+|..+|++++|+|+ ++ ....+++++.++.|++||+.+++.. .+..+.++++ +.+|+
T Consensus 13 ~~~~h~~~v~~i~~~p~---~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWH---SKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp EECTTCSCEEEEEECTT---CCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred eecCCCCceEEEEEecc---cCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 44589999999999983 11 1345666666779999999876542 1223334444 66899
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeee---cccCC
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTL---PCHQL 178 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~---~~~~~ 178 (312)
+++.||.|++||+.+.+. +... .+|...|.+++|+| ++++|++++.||.|++ |+++.+....+ ..|..
T Consensus 90 ~~~~dg~i~v~d~~~~~~--~~~~-----~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQC--IKHY-----VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp EEETTCEEEEECTTTCCE--EEEE-----ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred EecCCCEEEEEEchhceE--eeee-----cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 999999999999987442 2222 36889999999999 9999999999999999 88887777777 67999
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec---------------------cCCCCcccceeeEEEEEcCC
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC---------------------SDKTNGVHKRIIWGVAWSHD 237 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------------------~~~~~~~~~~~v~~~~~~~~ 237 (312)
.|.+++|+|++++|++++.||.|++||+++.+....+.. .......|...|.+++|+
T Consensus 163 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 999999999999999999999999999987543221111 000011177889999998
Q ss_pred CceEEEeccCCeEEEEecCCCCCCccccc--ccccceeEEeeccCcceeEEEeccC--CCeEEEEecCCCcccceEEeC
Q psy15191 238 SRYFLTISRDGVCVVWGLGEPPTEEDLVQ--NTLWPEVQKLYGHGYEIYSLAASHD--GTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 238 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++|++++.||.|++||+........... ......+..+.+|...|++++|+|+ +++|++++.| |.|++|
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----g~i~vw 314 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----GKLYVW 314 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----SCEEEE
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----CcEEEE
Confidence 77999999999999999987643221111 1112357778889999999999999 9999999554 459998
No 97
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.2e-32 Score=215.46 Aligned_cols=261 Identities=10% Similarity=0.019 Sum_probs=178.3
Q ss_pred ceEeCCCC---eEEEEeccCCCceEEEEEeCCCCceEEEEcc--ccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEee
Q psy15191 7 DVVNGEGG---KVLYTLTNHKSKVMAVKWNGEGGKVLYTLTN--HKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK 81 (312)
Q Consensus 7 ~v~~~~~~---~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~ 81 (312)
.+|++.++ +.++++.+|..+|..+.+.++...++..--| |...|++++++|+.. .-++++++++.+ +++|+
T Consensus 66 ~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~--~~~~~l~s~g~~--~~v~~ 141 (356)
T 2w18_A 66 SLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDE--SEKQVLLKSGNI--KAVLG 141 (356)
T ss_dssp EEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--------CCEEEEEEEEE--EEEEE
T ss_pred EEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCcc--ccccEEEeCCCe--EEEEe
Confidence 35666666 6666666666666666666655555444333 344566666555400 006788887744 88887
Q ss_pred ecCCcccccccccCCCCCceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC---CCCeEEEeec
Q psy15191 82 YVSEGNYLPYHMRDDSKQLHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP---RGDYIIAHGF 156 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~ 156 (312)
+. ++.++.+++ .|+.|++|++... +..+.... .|...+..++|+| ++..|++++.
T Consensus 142 l~--------------~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~-----~~~~~v~~l~fs~~~g~~~~LaSgS~ 201 (356)
T 2w18_A 142 LT--------------KRRLVSSSGTLSDQQVEVMTFAED-GGGKENQF-----LMPPEETILTFAEVQGMQEALLGTTI 201 (356)
T ss_dssp ET--------------TTEEEEEESSSTTCEEEEEEECTT-SCEEEEEE-----ECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred cC--------------CCcEEEecccCCCCcEEEEEECCC-Cceeeeec-----cCCCceeeEEeeccCCCCceEEEecC
Confidence 63 233445533 6999999999542 22233322 5677788899999 7899999999
Q ss_pred CCeEEE-ecccCceeeeecccC---CceeEEEECCCCCEE------------EEEecCCeEEEEEccCCCeEEEEeccCC
Q psy15191 157 QGSLHL-DVTTWKQIQTLPCHQ---LTITQLAFSPDDTHL------------VSVSRDRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 157 ~~~i~~-d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
|+.|++ |+++++.+..+.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+.+.+..+....
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~- 280 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL- 280 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-
Confidence 999999 999998888887543 357778999999886 567889999999999887665443211
Q ss_pred CCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-EEEeccCCCeEEEEe
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY-SLAASHDGTLLASAC 299 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~s 299 (312)
...|...+.+..+ ++.++|+++.|++|+|||+.++. ++.++.+|...+. .++|+|||++|++|+
T Consensus 281 -p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 281 -PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp -CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS------------EEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred -cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc------------EEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 0013333444444 37899999999999999999874 7888989987665 589999999999996
Q ss_pred cCCCcccceEEeC
Q psy15191 300 KATKPEHAAIIIW 312 (312)
Q Consensus 300 ~d~~~~dg~i~iW 312 (312)
.|++ |+||
T Consensus 346 ~D~T-----IklW 353 (356)
T 2w18_A 346 KDGN-----IFVY 353 (356)
T ss_dssp TTSC-----EEEE
T ss_pred CCCc-----EEEe
Confidence 5555 9999
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=226.97 Aligned_cols=233 Identities=18% Similarity=0.240 Sum_probs=182.1
Q ss_pred CeEEEEeccCCCceEEEEEeCCC---------------------CceEEEEccccCcEEEEEEecCcCcCCCCceEEEec
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNGEG---------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS 72 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~~~---------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 72 (312)
|+++..+.+|...|.+++|++++ ++.+..+.+|...|++++|+++ .++++|++|+
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~~l~s~~ 76 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP----KFGTILASCS 76 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG----GGCSEEEEEE
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC----CCCCEEEEec
Confidence 45666777888888888866654 3456678899999999999865 4478999999
Q ss_pred CCCcEEEeeecCCcc----------cccccccCCCC--CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191 73 LDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY 140 (312)
Q Consensus 73 ~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~ 140 (312)
.||.|++||+.+++. ..+..+.++++ +.++++++.|+.|++||+........... ..|...|.
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~v~ 151 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-----DAHAIGVN 151 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-----ECCTTCEE
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-----cCCCCceE
Confidence 999999999998752 23444555677 78999999999999999988543332222 36888999
Q ss_pred EEEECC-------------CCCeEEEeecCCeEEE-ecccCc----eeeeecccCCceeEEEECCC---CCEEEEEecCC
Q psy15191 141 GCKFGP-------------RGDYIIAHGFQGSLHL-DVTTWK----QIQTLPCHQLTITQLAFSPD---DTHLVSVSRDR 199 (312)
Q Consensus 141 ~~~~~~-------------~~~~l~~~~~~~~i~~-d~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~ 199 (312)
+++|+| ++.++++++.|+.|++ |+++.. ....+.+|...|.+++|+|+ +++|++++.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 999999 6999999999999999 555433 33456689999999999999 89999999999
Q ss_pred eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191 200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 257 (312)
.|++||+++........... ...+...|++++|+|++++|++++.||.|++|++..
T Consensus 232 ~i~iwd~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 232 TCIIWTQDNEQGPWKKTLLK--EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEEEESSTTSCCEEEESS--SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEEeCCCCCccceeeeec--cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99999999764221111111 111677899999999999999999999999999874
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.9e-32 Score=236.56 Aligned_cols=261 Identities=19% Similarity=0.261 Sum_probs=211.8
Q ss_pred CCCCeEEEEeccCCCceEEEEEeCCCC----ceEEEEccccCc-EEEEEEec--CcCcCCCCceEEEecCCCcEEEeeec
Q psy15191 11 GEGGKVLYTLTNHKSKVMAVKWNGEGG----KVLYTLTNHKSK-VMAVKWVL--NTSLDPEHKDLVSCSLDKTAILWKYV 83 (312)
Q Consensus 11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~~~~~~~~l~s~~~dg~i~vw~~~ 83 (312)
.++++.+....+. . ...|+.+++ +....+.+|... |++++|+| + +++|++++.||.|++||+.
T Consensus 27 spdg~~l~~~~~~--~--v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~------~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 27 DPTTNAIAYPCGK--S--AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG------SQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp ETTTTEEEEEETT--E--EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTT------CCEEEEEETTSEEEEEEEE
T ss_pred CCCCCEEEEecCC--e--EEEEECCCCCCccccceEEecCCCceEEEEEECcCCC------CCEEEEecCCCEEEEEeCC
Confidence 3456666655432 2 234898888 899999999999 99999999 8 8999999999999999997
Q ss_pred CC--------cc--------cccccccCCCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEE
Q psy15191 84 SE--------GN--------YLPYHMRDDSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK 143 (312)
Q Consensus 84 ~~--------~~--------~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 143 (312)
++ .. ..+..+.+++++.++++++.+ +.|++||... . ...+.+|...|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~----~-----~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN----S-----LGEVSGHSQRINACH 167 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC----E-----EEECCSCSSCEEEEE
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC----c-----ceeeecCCccEEEEE
Confidence 54 11 234455668888899999988 7899998432 1 222347889999999
Q ss_pred ECCCCC-eEEEeecCCeEEE-ecccCceeeeecccCC---ceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 144 FGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTLPCHQL---TITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 144 ~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
|+|+++ .+++++.|+.+++ |..+.+....+..|.. .|.+++|+|+ +++|++++.|+.|++||+++.+.+..+..
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence 999998 7999999999999 8888888888888998 9999999999 99999999999999999998888776621
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeecc----CcceeEEEeccCCC
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYEIYSLAASHDGT 293 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~ 293 (312)
. ...|...|.+++|+ ++++|++++.|+.|++||+..+. .+..+..+ ...+.++.|+ +++
T Consensus 248 ~---~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-~~~ 310 (615)
T 1pgu_A 248 D---QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK------------CVQKWTLDKQQLGNQQVGVVAT-GNG 310 (615)
T ss_dssp T---TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE------------EEEEEECCTTCGGGCEEEEEEE-ETT
T ss_pred c---ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc------------EEEEEcCCCCcccCceeEEEeC-CCC
Confidence 0 00188899999999 99999999999999999998763 45556555 4678888885 889
Q ss_pred eEEEEecCCCcccceEEeC
Q psy15191 294 LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 294 ~l~s~s~d~~~~dg~i~iW 312 (312)
++++++.|+. |++|
T Consensus 311 ~l~~~~~~g~-----i~~~ 324 (615)
T 1pgu_A 311 RIISLSLDGT-----LNFY 324 (615)
T ss_dssp EEEEEETTSC-----EEEE
T ss_pred eEEEEECCCC-----EEEE
Confidence 9999965555 8887
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=226.17 Aligned_cols=235 Identities=11% Similarity=0.083 Sum_probs=183.3
Q ss_pred cccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeec--CCccc----------ccccccCCCCCceEEEEeCCCcE
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYV--SEGNY----------LPYHMRDDSKQLHLLSCSMDKSI 111 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~--~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i 111 (312)
+|.+.|++++|+|+ +++| ++++.||.|++||+. ++... .+..+.+++++.+|++++.++.|
T Consensus 100 ~~~~~v~~~~~s~d------~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 100 PIYSYIRNLRLTSD------ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp CCCCCEEEEEECTT------SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCceEEEEEcCC------CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 34457999999999 8886 999999999999998 65542 23355668888999999999999
Q ss_pred EEEcCCCCcceeeeeeeecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEEC
Q psy15191 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFS 186 (312)
Q Consensus 112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~ 186 (312)
++|++.+.+... .....+.+|...|.+++|+|+ +++|++++.|+.|++ |+++.+.... +.+|...|.+++|+
T Consensus 174 ~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 174 YSIDINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG 250 (450)
T ss_dssp EEEETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC
T ss_pred EEEecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC
Confidence 999998744221 011123467889999999999 999999999999999 7777666665 45899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------------------CcccceeeEEEEEcCCCceEEEec-cC
Q psy15191 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------------------NGVHKRIIWGVAWSHDSRYFLTIS-RD 247 (312)
Q Consensus 187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~l~s~~-~d 247 (312)
++++|++++.|+.|++||+++.+.+..+...... .......|.+++|+|++++|++++ .|
T Consensus 251 -d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d 329 (450)
T 2vdu_B 251 -KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT 329 (450)
T ss_dssp -STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC
T ss_pred -CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC
Confidence 9999999999999999999998887777632100 001345689999999999999998 89
Q ss_pred CeEEEEec--CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 248 GVCVVWGL--GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 248 g~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
+.|++|++ ..... +..+..+..| ..|.+++|+|++.++++++
T Consensus 330 ~~i~iw~~~~~~~~~---------l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 330 KCIIILEMSEKQKGD---------LALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp SEEEEEEECSSSTTC---------EEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred CeEEEEEeccCCCCc---------eeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 99999999 33211 1256677777 8899999999654444443
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.7e-33 Score=230.36 Aligned_cols=241 Identities=18% Similarity=0.192 Sum_probs=184.0
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeC-CCCceE-------------------EEE-------------ccccCcEEEE
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNG-EGGKVL-------------------YTL-------------TNHKSKVMAV 53 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~-~~~~~~-------------------~~~-------------~~h~~~v~~~ 53 (312)
++|+.+.++....+.+|.+.|.+++|++ ++..++ ..+ .+|...|.++
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 105 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV 105 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence 4566677778888899999999999998 542111 111 2499999999
Q ss_pred EEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191 54 KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW 123 (312)
Q Consensus 54 ~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 123 (312)
+|+|+ ++.+|++++.||.|++||+.+++.. .+.+.+..+++.++++++.++.|++||+++.+..
T Consensus 106 ~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 179 (408)
T 4a11_B 106 QWYPH-----DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS- 179 (408)
T ss_dssp EECTT-----CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-
T ss_pred EEccC-----CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-
Confidence 99993 1779999999999999999887652 3344445556779999999999999999874422
Q ss_pred eeeeeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecccCc-eeeee---------------cccCCceeEEEE
Q psy15191 124 LETARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVTTWK-QIQTL---------------PCHQLTITQLAF 185 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~~~~-~~~~~---------------~~~~~~v~~~~~ 185 (312)
.. +..|...|.+++|+|+++. +++++.||.+++ |+++.. ....+ ..|...|.+++|
T Consensus 180 -~~-----~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 180 -HI-----LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp -EE-----ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred -ee-----ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 22 2368889999999999985 889999999999 554433 11111 468899999999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCCeEEEEecc------------------------------------CC----CCccc
Q psy15191 186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS------------------------------------DK----TNGVH 225 (312)
Q Consensus 186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------------------------------------~~----~~~~~ 225 (312)
+|++++|++++.||.|++||+++.+........ .. ....|
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 999999999999999999999875432211100 00 00127
Q ss_pred ceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 226 KRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 226 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
...|++++|+|++++|++++.||.|++||+....
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 7889999999999999999999999999998874
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.4e-32 Score=222.27 Aligned_cols=195 Identities=12% Similarity=-0.004 Sum_probs=153.1
Q ss_pred cCcEEEEEEecCcCcCCCCceEE--EecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLV--SCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD 117 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~--s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 117 (312)
...+.+++|+|+ |++++ +++.|++|+|||+.+++.. .+..+.++|++.++++++.++ +.+|+..
T Consensus 133 ~~~~~~v~fSpD------g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~ 205 (365)
T 4h5i_A 133 DDYTKLVYISRE------GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTV 205 (365)
T ss_dssp TCCEEEEEECTT------SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETT
T ss_pred ccCEEEEEEcCC------CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEec
Confidence 345888999998 88875 5568999999999887652 345566788999999988655 5566555
Q ss_pred CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC----eEEE-ecccCce----eeeecccCCceeEEEECCC
Q psy15191 118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG----SLHL-DVTTWKQ----IQTLPCHQLTITQLAFSPD 188 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~-d~~~~~~----~~~~~~~~~~v~~~~~~~~ 188 (312)
+++..... ....|...+.+++|+|+++.+++++.++ .+++ +...+.. ...+.+|...|++++|+||
T Consensus 206 ~~~~~~~~-----~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 206 TGSCIARK-----TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp TCCEEEEE-----CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred cCcceeee-----ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence 53322211 2236788899999999999999999887 3454 4444332 2345578999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 189 DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 189 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
|++|++|+.|+.|+|||+++.+.+..+... |...|++++|+|||++||+|+.|++|+|||+....
T Consensus 281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~g------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 281 GELAVLASNDNSIALVKLKDLSMSKIFKQA------HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEETTS------SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCceEEEcCCCEEEEEECCCCcEEEEecCc------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999999999999999999988877665322 88999999999999999999999999999997653
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.5e-32 Score=220.71 Aligned_cols=153 Identities=12% Similarity=0.130 Sum_probs=112.5
Q ss_pred CeEEE--eecCCeEEE-ecccCc----------------eeeeecccCCceeEEEECCCCCEEEEEecCCe-EEEEEccC
Q psy15191 149 DYIIA--HGFQGSLHL-DVTTWK----------------QIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR-WGLYKRQS 208 (312)
Q Consensus 149 ~~l~~--~~~~~~i~~-d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~wd~~~ 208 (312)
..+++ |+.+|.|++ |+.+.. ....+.+|...|.+++|+|++++|++++.|++ |++||+++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 34444 578899999 665543 14567789999999999999999999999998 99999999
Q ss_pred CCeEEEEe-ccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccc---------ccccce-eEEee
Q psy15191 209 SGRLSLVA-CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ---------NTLWPE-VQKLY 277 (312)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~-~~~~~ 277 (312)
.+.+..+. +. |...|++++|+|++++|++++.|+.|++||+..+.......- ...|.. ...+.
T Consensus 228 ~~~~~~~~~g~------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 228 GVLVREFRRGL------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp CCEEEEEECTT------CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred CcEEEEEEcCC------CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 98888776 22 677899999999999999999999999999987643221100 001100 01111
Q ss_pred -ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 278 -GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 278 -~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+......++|++++++|++++. ||.+++|
T Consensus 302 ~~~~~~~~~~a~~~d~~~l~~~~~-----dg~~~~~ 332 (355)
T 3vu4_A 302 VDKHVRGCKIAWISESSLVVVWPH-----TRMIETF 332 (355)
T ss_dssp CCTTCCCCEEEESSSSEEEEEETT-----TTEEEEE
T ss_pred cCCCCCceEEEEeCCCCEEEEEeC-----CCeEEEE
Confidence 12233477999999999999955 4548776
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-31 Score=217.63 Aligned_cols=211 Identities=17% Similarity=0.250 Sum_probs=165.9
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------cccccccCCCC--
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------YLPYHMRDDSK-- 98 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------~~~~~~~~~~~-- 98 (312)
+....+.+|...|++++|+|. .++.+|++|+.||.|++||+..+.. ..+..+.+.++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~----~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 123 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASP----EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL 123 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCG----GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGG
T ss_pred eecceeccCCCcEEEEEEcCC----CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCC
Confidence 456777899999999999982 2278999999999999999987631 12344455677
Q ss_pred CceEEEEeCCCcEEEEcCCCCcceeeeee----e--ecccCCCccceeEEEECCC---CCeEEEeecCCeEEE-ecccCc
Q psy15191 99 QLHLLSCSMDKSIIVWAPDPTTGLWLETA----R--VGEVGGNTLGFYGCKFGPR---GDYIIAHGFQGSLHL-DVTTWK 168 (312)
Q Consensus 99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~--~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-d~~~~~ 168 (312)
+.++++++.|+.|++||+++.+....... . ......+...+.+++|+|+ +..+++++.++.+.+ +.....
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 88999999999999999987553221111 0 1112357778999999997 899999999999977 444444
Q ss_pred e--eeeecccCCceeEEEECCCC----CEEEEEecCCeEEEEEccCCCe-------------------------------
Q psy15191 169 Q--IQTLPCHQLTITQLAFSPDD----THLVSVSRDRRWGLYKRQSSGR------------------------------- 211 (312)
Q Consensus 169 ~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~------------------------------- 211 (312)
. ...+.+|...|.+++|+|++ ++|++++.||.|++||++....
T Consensus 204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
T 3f3f_A 204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSN 283 (351)
T ss_dssp EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccc
Confidence 3 55666899999999999998 8999999999999999987421
Q ss_pred ---------------EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 212 ---------------LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 212 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+..+. .|...|++++|+|++++|++++.||.|++||+..+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 284 TEEKAELQSNLQVELLSEHD-------DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp -------CCSEEEEEEEEEC-------TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cceeeeecccccccEEEEEe-------cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 11122 177889999999999999999999999999998763
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=228.95 Aligned_cols=222 Identities=11% Similarity=0.093 Sum_probs=172.7
Q ss_pred EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc------cccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191 43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN------YLPYHMRDDSKQLHLLSCSMDKSIIVWAP 116 (312)
Q Consensus 43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 116 (312)
+++|...|++++|+|+ | .++.+.+|+.+.... -.+..+.++|++..|++++.||.|++||.
T Consensus 48 l~gh~~~v~~V~FsPd------g-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~ 114 (588)
T 2j04_A 48 INCNSKNLFHVKEFPL------E-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKD 114 (588)
T ss_dssp CSSBGGGTEEEEEECC------C-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEET
T ss_pred ecCCCccEEEEEECCC------C-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 4789999999999999 6 577777776553332 24667788999999999999999999995
Q ss_pred CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCce-------eeee----cccCCceeEEE
Q psy15191 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-------IQTL----PCHQLTITQLA 184 (312)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~-------~~~~----~~~~~~v~~~~ 184 (312)
.. .+.... ....-....+.+++|||+|++|++|+.||.|++ |+.+..+ ...+ .+|...|.+++
T Consensus 115 ~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa 189 (588)
T 2j04_A 115 NK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV 189 (588)
T ss_dssp TE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE
T ss_pred Cc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEE
Confidence 43 222211 111011236999999999999999999999999 6666542 3444 57888999999
Q ss_pred ECCCCCEEEEEecCCeEEEEEccCCCeE---EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCC
Q psy15191 185 FSPDDTHLVSVSRDRRWGLYKRQSSGRL---SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE 261 (312)
Q Consensus 185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 261 (312)
|+||| +++++.|+.|++||+...... ..+... |...|.+++|+ +++||+++ ++.|++||+..+
T Consensus 190 wSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~------h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~--- 255 (588)
T 2j04_A 190 WYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA------SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY--- 255 (588)
T ss_dssp EETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC------CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT---
T ss_pred EcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc------ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC---
Confidence 99999 888999999999999876632 333221 66789999999 68899887 699999999876
Q ss_pred cccccccccceeEEee-ccCcceeEEEe--ccCCCeEEEEecCCCcccceEEeC
Q psy15191 262 EDLVQNTLWPEVQKLY-GHGYEIYSLAA--SHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 262 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~--s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
....+. +|.+.|.+++| +|++..|+++ .+||+ ++|
T Consensus 256 ----------~~~~~~~gh~~~V~~va~~~s~d~~~La~a-----~edG~-klw 293 (588)
T 2j04_A 256 ----------SISSLKTGSLENFHIIPLNHEKESTILLMS-----NKTSY-KVL 293 (588)
T ss_dssp ----------EEEEEECSCCSCCCEEEETTCSSCEEEEEC-----SSCEE-EEE
T ss_pred ----------eEEEEEcCCCceEEEEEeeeCCCCCEEEEE-----cCCCC-EEE
Confidence 342333 89999999999 9999999999 78888 776
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-32 Score=223.07 Aligned_cols=222 Identities=11% Similarity=0.068 Sum_probs=166.9
Q ss_pred CCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCc-------ceeeeeeeec
Q psy15191 64 EHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT-------GLWLETARVG 130 (312)
Q Consensus 64 ~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~ 130 (312)
++.+|++|+.||.|++||+.+++.. .+....+++. +++++.|++|++|+..... ...+...
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~--- 120 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI--- 120 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE---
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe---
Confidence 3789999999999999999988753 2333334444 9999999999999877421 1111111
Q ss_pred ccCCCccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191 131 EVGGNTLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKR 206 (312)
Q Consensus 131 ~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 206 (312)
..+|...|.+++|+| +++++++++.||.+++ |+++.+...... .+...+.+++|+|++.+|++|+.||.|++||+
T Consensus 121 -~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 121 -EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp -ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred -ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 125667899999999 9999999999999999 777777655543 45668999999999999999999999999999
Q ss_pred cCCCeE-EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-
Q psy15191 207 QSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY- 284 (312)
Q Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~- 284 (312)
++.+.. ..+... |..+|++++|+|++.+|++++ |+.|++||++...... .+..+..|...+.
T Consensus 200 ~~~~~~~~~~~~~------h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 200 SSPDQASSRFPVD------EEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL---------AYPTYTIPEFKTGT 263 (343)
T ss_dssp SCTTSCCEECCCC------TTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB---------SSCCCBC-----CC
T ss_pred CCCCCCccEEecc------CCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce---------eecccccccccccc
Confidence 988766 444431 778999999999999999999 4599999998874321 1222223444444
Q ss_pred -EEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 285 -SLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 285 -~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++|+|+|++|++++. .|+.|+||
T Consensus 264 ~~~~~~~~g~~l~~~s~----~d~~i~v~ 288 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSN----ESNSLTIY 288 (343)
T ss_dssp EEEEECTTSSEEEEEET----TTTEEEEE
T ss_pred eEEEECCCCCEEEEecC----CCCcEEEE
Confidence 6999999999999964 24459987
No 107
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.9e-31 Score=219.63 Aligned_cols=234 Identities=16% Similarity=0.215 Sum_probs=190.7
Q ss_pred ceEeCCCCeEEEEec--cCCCceEEEEEeCC-------------------CCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191 7 DVVNGEGGKVLYTLT--NHKSKVMAVKWNGE-------------------GGKVLYTLTNHKSKVMAVKWVLNTSLDPEH 65 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~--~h~~~v~~~~w~~~-------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 65 (312)
+||+..+|+.+..+. +|...|++++|+++ +++++..+.+|...|.++.+++
T Consensus 128 ~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~-------- 199 (420)
T 4gga_A 128 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS-------- 199 (420)
T ss_dssp EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--------
T ss_pred EEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--------
Confidence 589999999877664 67888999996554 4778889999999999988754
Q ss_pred ceEEEecCCCcEEEeeecCCcc---------cccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGN---------YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT 136 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 136 (312)
.+|++|+.|+.+++||...... ..+....+.+++.++++++.|+.+++|+..+.+.... .......|.
T Consensus 200 ~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~---~~~~~~~~~ 276 (420)
T 4gga_A 200 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV---PLQTFTQHQ 276 (420)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC---CSEEECCCS
T ss_pred CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce---eeeeecccC
Confidence 4999999999999999876543 1334445577888999999999999999987543221 112234678
Q ss_pred cceeEEEECCCCCe-EEE--eecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCC
Q psy15191 137 LGFYGCKFGPRGDY-IIA--HGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSG 210 (312)
Q Consensus 137 ~~v~~~~~~~~~~~-l~~--~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~ 210 (312)
..|.+++|+|.+.. +++ |+.|+.|++ |+.++.....+. +...+.++.|+|+++.+++++ .|+.|++||+.+.+
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 89999999997654 444 457999999 888888777776 456789999999999988765 78999999999999
Q ss_pred eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.+..+.+ |...|++++|+|+|++|++|+.|++|+|||+....
T Consensus 356 ~v~~l~g-------H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 356 KVAELKG-------HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEECC-------CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEEEcC-------CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9888876 88999999999999999999999999999997653
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-31 Score=222.25 Aligned_cols=236 Identities=13% Similarity=0.089 Sum_probs=184.1
Q ss_pred EEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc------------cccccccCCC-CCceEEEEeCCCcEEEEc
Q psy15191 50 VMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN------------YLPYHMRDDS-KQLHLLSCSMDKSIIVWA 115 (312)
Q Consensus 50 v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~------------~~~~~~~~~~-~~~~l~~~~~d~~i~i~d 115 (312)
...++++|+ .. ++++++.||.|+||++..... ..+..+.+++ ++.+|++++.||.|++||
T Consensus 37 ~~~~~~~~~------~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~ 110 (402)
T 2aq5_A 37 SGFCAVNPK------FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE 110 (402)
T ss_dssp SCSEEECSS------EEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred CCcEEECCC------eEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEE
Confidence 445777776 33 344678999999999865321 1344455677 788999999999999999
Q ss_pred CCCCcceeeeeeeecccCCCccceeEEEECCCC-CeEEEeecCCeEEE-ecccCceeeee--cccCCceeEEEECCCCCE
Q psy15191 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTL--PCHQLTITQLAFSPDDTH 191 (312)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 191 (312)
+.+.............+.+|...|.+++|+|++ ++|++++.|+.|++ |+++.+....+ ..|...|.+++|+|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 987532211111223344788999999999998 69999999999999 88888888888 789999999999999999
Q ss_pred EEEEecCCeEEEEEccCCCeEEEEeccCCCCccccee-eEEEEEcCCCceEEEe---ccCCeEEEEecCCCCCCcccccc
Q psy15191 192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI-IWGVAWSHDSRYFLTI---SRDGVCVVWGLGEPPTEEDLVQN 267 (312)
Q Consensus 192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~ 267 (312)
|++++.|+.|++||+++.+.+..+... |... +.+++|+|++++|++| +.|+.|++||+.....
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~------- 257 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRP------HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE------- 257 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECS------SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-------
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccC------CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-------
Confidence 999999999999999988777766321 4443 8899999999999999 8999999999987642
Q ss_pred cccceeEE-eeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 268 TLWPEVQK-LYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 268 ~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++.. ...|...+.+++|+|++++|++++ +.||.|++|
T Consensus 258 ----~~~~~~~~~~~~v~~~~~s~~~~~l~~~g----~~dg~i~i~ 295 (402)
T 2aq5_A 258 ----PLSLQELDTSSGVLLPFFDPDTNIVYLCG----KGDSSIRYF 295 (402)
T ss_dssp ----CSEEEECCCCSSCEEEEEETTTTEEEEEE----TTCSCEEEE
T ss_pred ----CceEEeccCCCceeEEEEcCCCCEEEEEE----cCCCeEEEE
Confidence 1222 225677899999999999997553 345559998
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.9e-32 Score=223.01 Aligned_cols=217 Identities=14% Similarity=0.106 Sum_probs=149.4
Q ss_pred CceEEEecCCCcEEEeeecCCccc-------------ccccccCC--------CCCceEEEEeCCCcEEEEcCCCCccee
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRDD--------SKQLHLLSCSMDKSIIVWAPDPTTGLW 123 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~ 123 (312)
+.+|++++.|++|+|||.+.++.. .+..+.+. .++.+|++++.|++|++||+.+...
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~-- 178 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP-- 178 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE--
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce--
Confidence 678999999999999999876531 12222222 2677999999999999999976432
Q ss_pred eeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-ecccCceeeee-------------------------ccc
Q psy15191 124 LETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTTWKQIQTL-------------------------PCH 176 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~~~~~~~~-------------------------~~~ 176 (312)
.... ..|...+.+++|+|++. +|++++.|+.|++ |+++.+..... .+|
T Consensus 179 ~~~~-----~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 179 ILAG-----YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp EEEE-----EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred eeee-----cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 2222 25678899999999875 7999999999999 66554332211 257
Q ss_pred CCceeEEEEC-CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc-----------ccceeeEEEEEcC--CCceEE
Q psy15191 177 QLTITQLAFS-PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG-----------VHKRIIWGVAWSH--DSRYFL 242 (312)
Q Consensus 177 ~~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~--~~~~l~ 242 (312)
...+.++.|+ |+++.|++++.|+.+++||+........+........ ..........|+| ++.+++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 7888999987 7999999999999999999987655444332111000 0111112233443 445778
Q ss_pred EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 243 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
+|+.||.|++||+..+. ....+.+|..+|++++|+|||++||+++.
T Consensus 334 sgs~Dg~V~lwd~~~~~------------~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKD------------SNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp EETTTTEEEEEETTCTT------------CCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred EECCCCEEEEEECCCCc------------EEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 88999999999998774 45666788999999999999999999943
No 110
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.1e-31 Score=219.04 Aligned_cols=233 Identities=18% Similarity=0.205 Sum_probs=183.7
Q ss_pred EEEEccccCcE--EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCC
Q psy15191 40 LYTLTNHKSKV--MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 40 ~~~~~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d 108 (312)
+....+|...+ .++.|++ ..+++++.|+.|++||+.+++.. .+..+.+++++.+|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~--------~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d 155 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSN--------LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN 155 (401)
T ss_dssp EEECTTCCCCTTCBCEEECT--------TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred eeeCCCCcCCceEEEEeecC--------CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC
Confidence 33444666554 3455544 36888999999999999887652 34455667888899999999
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc-cCceeeeecccCCceeEEEEC
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT-TWKQIQTLPCHQLTITQLAFS 186 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~-~~~~~~~~~~~~~~v~~~~~~ 186 (312)
|.|++||+.+.+. ... +.+|...|.+++| +++.+++++.||.|++ |++ .......+.+|...|.+++|+
T Consensus 156 g~i~iwd~~~~~~--~~~-----~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 156 GLVDIYDVESQTK--LRT-----MAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp SCEEEEETTTCCE--EEE-----ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEECcCCeE--EEE-----ecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 9999999987442 222 2378889999999 5679999999999999 766 344556677899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc-eEEEec--cCCeEEEEecCCCCCCcc
Q psy15191 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR-YFLTIS--RDGVCVVWGLGEPPTEED 263 (312)
Q Consensus 187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~ 263 (312)
|++++|++++.|+.|++||+++......+.. |...|.+++|+|++. ++++++ .|+.|++||+.++.
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~---- 295 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTN-------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA---- 295 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSSEEEEECC-------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC----
T ss_pred CCCCEEEEEeCCCeEEEccCCCCCccEEecC-------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC----
Confidence 9999999999999999999998877776654 788899999999775 555544 79999999998763
Q ss_pred cccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 264 LVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+. +...|.+++|+|++++|++++. ..||.|++|
T Consensus 296 --------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g---~~dg~i~v~ 332 (401)
T 4aez_A 296 --------RVNTVD-AGSQVTSLIWSPHSKEIMSTHG---FPDNNLSIW 332 (401)
T ss_dssp --------EEEEEE-CSSCEEEEEECSSSSEEEEEEC---TTTCEEEEE
T ss_pred --------EEEEEe-CCCcEEEEEECCCCCeEEEEee---cCCCcEEEE
Confidence 444453 6778999999999999999531 356669998
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-32 Score=241.27 Aligned_cols=211 Identities=19% Similarity=0.240 Sum_probs=170.3
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc----------cccccccCCCC--CceEEE
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN----------YLPYHMRDDSK--QLHLLS 104 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~----------~~~~~~~~~~~--~~~l~~ 104 (312)
++.+..+.+|.++|++++|+|+ .++++|++|+.||.|++||+.++.. ..+..+.++++ +..+++
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~----~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHP----KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCT----TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CccceeccCCcCceEEEEecCC----CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE
Confidence 4567788899999999999886 5578999999999999999998752 23445556777 889999
Q ss_pred EeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-------------CCCeEEEeecCCeEEE-ecccC---
Q psy15191 105 CSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-------------RGDYIIAHGFQGSLHL-DVTTW--- 167 (312)
Q Consensus 105 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~-d~~~~--- 167 (312)
++.||.|++||+++......... .+|...|.+++|+| +++.+++|+.||.|++ |+++.
T Consensus 119 gs~dg~I~vwdl~~~~~~~~~~~-----~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 119 ASSDGKVSVVEFKENGTTSPIII-----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 193 (753)
T ss_dssp EETTSEEEEEECCSSSCCCCEEE-----ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE
T ss_pred EeCCCcEEEEEeecCCCcceeEe-----ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc
Confidence 99999999999987543322222 36888999999999 5899999999999999 66554
Q ss_pred -ceeeeecccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191 168 -KQIQTLPCHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT 243 (312)
Q Consensus 168 -~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 243 (312)
.....+.+|...|.+++|+|+ +++|++++.||.|++||+++......... .....|...|++++|+|++++|++
T Consensus 194 ~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL--LKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB--SSSSCCSSCCCCEEECTTTCCEEE
T ss_pred ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE--eccCCCCCceEEEEEcCCCCEEEE
Confidence 444566689999999999999 89999999999999999987642211111 111227788999999999999999
Q ss_pred eccCCeEEEEecCCC
Q psy15191 244 ISRDGVCVVWGLGEP 258 (312)
Q Consensus 244 ~~~dg~i~iwd~~~~ 258 (312)
++.||.|++|++...
T Consensus 272 ~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 272 SGGDNKVTLWKENLE 286 (753)
T ss_dssp ECSSSCEECCBCCSS
T ss_pred EcCCCEEEEEecCCC
Confidence 999999999999853
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-31 Score=222.19 Aligned_cols=230 Identities=13% Similarity=0.136 Sum_probs=183.4
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc---cc------------------------------------
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG---NY------------------------------------ 88 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~---~~------------------------------------ 88 (312)
.++.+++|+|+ |++|+++ .++.|++||+.+++ ..
T Consensus 5 ~p~~~v~~s~d------g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (450)
T 2vdu_B 5 HPLQNLLTSRD------GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK 77 (450)
T ss_dssp CCCCEEEECSS------SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred ccEEEEEecCC------CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence 57889999999 8866655 57899999998887 21
Q ss_pred --------------------------ccccccCCCCCceE-EEEeCCCcEEEEcCC--CCcceeeeeeeecccCCCccce
Q psy15191 89 --------------------------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPD--PTTGLWLETARVGEVGGNTLGF 139 (312)
Q Consensus 89 --------------------------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~v 139 (312)
.+..+.+++++.+| ++++.|+.|++||+. +++. ...+.. ..+...|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~---~~~~~~v 152 (450)
T 2vdu_B 78 SNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV--LKLRKR---FCFSKRP 152 (450)
T ss_dssp ----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC--EEEEEE---EECSSCE
T ss_pred cCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce--eeeeec---ccCCCCc
Confidence 24455668888886 889999999999998 5332 222221 1356779
Q ss_pred eEEEECCCCCeEEEeecCCeEEE-ecccCceee----eecccCCceeEEEECCC---CCEEEEEecCCeEEEEEccCCCe
Q psy15191 140 YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQ----TLPCHQLTITQLAFSPD---DTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
.+++|+|++++|++++.+|.+++ ++.+..... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++...
T Consensus 153 ~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 153 NAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 99999999999999999999998 766665443 56689999999999999 99999999999999999998877
Q ss_pred EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee--------------
Q psy15191 212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-------------- 277 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------------- 277 (312)
+..+... |...|.+++|+ ++++|++++.|+.|++||+.++. ++..+.
T Consensus 233 ~~~~~~~------h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~------------~~~~~~~~~~~~~~~~~~~~ 293 (450)
T 2vdu_B 233 VDKWLFG------HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK------------NLSTFDYNSLIKPYLNDQHL 293 (450)
T ss_dssp EEEECCC------CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC------------EEEEEECHHHHGGGCCTTSB
T ss_pred eeeeecC------CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc------------Eeeeecchhhhhhhhhhccc
Confidence 6653321 88899999999 99999999999999999998874 233332
Q ss_pred -----------ccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 278 -----------GHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 278 -----------~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.....|.+++|+|++++|++++ ..|+.|+||
T Consensus 294 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----~~d~~i~iw 335 (450)
T 2vdu_B 294 APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV----EATKCIIIL 335 (450)
T ss_dssp C----------CBCCCEEEEEECSSSSEEEEEE----TTCSEEEEE
T ss_pred ccccccccccccceEEEEEEEEeCCCCEEEEEE----CCCCeEEEE
Confidence 2345789999999999999996 245569998
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=239.85 Aligned_cols=242 Identities=12% Similarity=0.058 Sum_probs=183.5
Q ss_pred EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEc
Q psy15191 43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWA 115 (312)
Q Consensus 43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d 115 (312)
..+|...|++++|+|+ +++||+|+.||+|+||+....+.. .+..+.+++ +.+|++++.|++|++||
T Consensus 13 ~~gh~~~V~~lafspd------g~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFT------QNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLS 85 (902)
T ss_dssp EEECSSCEEEEEEETT------TTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEE
T ss_pred ccCCCCCcEEEEECCC------CCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEE
Confidence 3489999999999999 999999999999999998765531 234445556 66899999999999999
Q ss_pred CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee-----------eeecccCCceeEE
Q psy15191 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI-----------QTLPCHQLTITQL 183 (312)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~-----------~~~~~~~~~v~~~ 183 (312)
+++++. +.... +...|.+++|+|+++++++|+.||.|++ |+++.++. ....+|.+.|.++
T Consensus 86 ~~~~~~--~~~~~------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 86 LYSQKV--LTTVF------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp TTTCSE--EEEEE------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred CCCCcE--EEEEc------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 998543 22222 4467999999999999999999999999 66655543 2235688999999
Q ss_pred EECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCC-----------CCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191 184 AFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK-----------TNGVHKRIIWGVAWSHDSRYFLTISRDGVCV 251 (312)
Q Consensus 184 ~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 251 (312)
+|+|+ +..|++++.|+.| +||+++.+....+..... ....|...|++++|+|+|++|++++.||.|+
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence 99995 5789999999999 999998877766654210 0011457899999999999999999999999
Q ss_pred EEecCCCCCCcccccccccceeEE--e---e-------------ccCcceeEEEec----cCC-CeEEEEecCCCcccce
Q psy15191 252 VWGLGEPPTEEDLVQNTLWPEVQK--L---Y-------------GHGYEIYSLAAS----HDG-TLLASACKATKPEHAA 308 (312)
Q Consensus 252 iwd~~~~~~~~~~~~~~~~~~~~~--~---~-------------~~~~~v~~~~~s----~~~-~~l~s~s~d~~~~dg~ 308 (312)
+||+.++.. +.. + . .|...|++++|+ |++ .+|++|+.|.......
T Consensus 237 lWd~~~g~~------------~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 237 FWDANSGHM------------IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEETTTCCE------------EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEECCCCcE------------EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999987632 211 1 1 135579999996 443 5777776653212234
Q ss_pred EEeC
Q psy15191 309 IIIW 312 (312)
Q Consensus 309 i~iW 312 (312)
|++|
T Consensus 305 v~~~ 308 (902)
T 2oaj_A 305 LTMI 308 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=223.98 Aligned_cols=260 Identities=12% Similarity=-0.002 Sum_probs=191.2
Q ss_pred eccCCCceEEEEEeCCC---------CceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-----
Q psy15191 20 LTNHKSKVMAVKWNGEG---------GKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----- 84 (312)
Q Consensus 20 ~~~h~~~v~~~~w~~~~---------~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----- 84 (312)
+.+|...|++++++|++ ++....+. .|...|.+++|+|+ |++||+++.||.|++||.+.
T Consensus 48 l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd------G~~LAs~s~dg~V~iwd~~~~l~~l 121 (588)
T 2j04_A 48 INCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPI------DDWMAVLSNNGNVSVFKDNKMLTNL 121 (588)
T ss_dssp CSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS------SSCEEEEETTSCEEEEETTEEEEEC
T ss_pred ecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCC------CCEEEEEeCCCcEEEEeCCceeeec
Confidence 47899999999988765 22122233 56788999999999 99999999999999999321
Q ss_pred -Ccc----cccccccCCCCCceEEEEeCCCcEEEEcCCCCcce-----eeeeeeecccCCCccceeEEEECCCCCeEEEe
Q psy15191 85 -EGN----YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL-----WLETARVGEVGGNTLGFYGCKFGPRGDYIIAH 154 (312)
Q Consensus 85 -~~~----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 154 (312)
... ..+..+.++|++.+|++|+.||+|++||+.++... .+.++. ....+|...|.+++|+|+| ++++
T Consensus 122 ~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~-~~~~gh~~~V~sVawSPdg--Laas 198 (588)
T 2j04_A 122 DSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIR-LSDAGSKDWVTHIVWYEDV--LVAA 198 (588)
T ss_dssp CCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEE-CSCTTCCCCEEEEEEETTE--EEEE
T ss_pred cCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeee-cccccccccEEEEEEcCCc--EEEE
Confidence 121 13556778999999999999999999999885320 122221 1124678899999999999 8888
Q ss_pred ecCCeEEE-ecccCcee---eee-cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191 155 GFQGSLHL-DVTTWKQI---QTL-PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII 229 (312)
Q Consensus 155 ~~~~~i~~-d~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v 229 (312)
+.|+.+++ |+.+.... ..+ .+|...|.+++|+ ++.|++++ ++.|++||+.+.+......+ |...|
T Consensus 199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g-------h~~~V 268 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG-------SLENF 268 (588)
T ss_dssp ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS-------CCSCC
T ss_pred eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC-------CCceE
Confidence 99999999 55444421 234 3788899999999 68888887 79999999986655333323 88889
Q ss_pred EEEEE--cCCCceEEEeccCCeEEEEecCCC-----CCCcccc--cccccc----eeEEeeccCcceeEEEeccCCCeEE
Q psy15191 230 WGVAW--SHDSRYFLTISRDGVCVVWGLGEP-----PTEEDLV--QNTLWP----EVQKLYGHGYEIYSLAASHDGTLLA 296 (312)
Q Consensus 230 ~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~--~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~ 296 (312)
..++| +|++..|+++++||+ ++|....- ....... ....|. .+..+.+ ...|++++|||||+.+|
T Consensus 269 ~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA 346 (588)
T 2j04_A 269 HIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIA 346 (588)
T ss_dssp CEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEE
T ss_pred EEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEE
Confidence 99999 999999999999999 99987421 1000000 011232 2333333 56799999999999999
Q ss_pred EEec
Q psy15191 297 SACK 300 (312)
Q Consensus 297 s~s~ 300 (312)
+++.
T Consensus 347 ~~~~ 350 (588)
T 2j04_A 347 IVYD 350 (588)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9975
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.3e-30 Score=214.77 Aligned_cols=222 Identities=19% Similarity=0.291 Sum_probs=183.3
Q ss_pred EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEE
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIV 113 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i 113 (312)
...+|...|.+++| + +++|++|+.||.|++||+.+++.. .+..+.+ ++.++++++.||.|++
T Consensus 128 ~~~~~~~~v~~~~~--d------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 128 CRSETSKGVYCLQY--D------DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRV 197 (435)
T ss_dssp CCCSSCCCEEEEEC--C------SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEE
T ss_pred cccCCCCcEEEEEE--C------CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEE
Confidence 34467778999887 4 679999999999999999887652 2222333 5669999999999999
Q ss_pred EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee---eeecccCCceeEEEECCCC
Q psy15191 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI---QTLPCHQLTITQLAFSPDD 189 (312)
Q Consensus 114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~---~~~~~~~~~v~~~~~~~~~ 189 (312)
||+.+++ .... +.+|...|.+++|++ ..+++++.||.|++ |+.+.... ..+.+|...|.+++| ++
T Consensus 198 wd~~~~~--~~~~-----~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 266 (435)
T 1p22_A 198 WDVNTGE--MLNT-----LIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD 266 (435)
T ss_dssp EESSSCC--EEEE-----ECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET
T ss_pred EECCCCc--EEEE-----EcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC
Confidence 9998854 2222 237888999999974 58999999999999 66655544 456689999999999 78
Q ss_pred CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccc
Q psy15191 190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL 269 (312)
Q Consensus 190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 269 (312)
+++++++.||.|++||+++.+.+..+.. |...|.++++ ++++|++|+.||.|++||+.++.
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~---------- 327 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNG-------HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA---------- 327 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC----------
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcC-------CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC----------
Confidence 8999999999999999999988887775 7788999998 46899999999999999998763
Q ss_pred cceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 270 WPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 270 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
++..+.+|...|.+++| ++.+|++|+.|+. |++|
T Consensus 328 --~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-----i~vw 361 (435)
T 1p22_A 328 --CLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-----IKVW 361 (435)
T ss_dssp --EEEEECCCSSCEEEEEC--CSSEEEEEETTSC-----EEEE
T ss_pred --EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-----EEEE
Confidence 67888999999999999 7889999965555 9998
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.4e-30 Score=210.95 Aligned_cols=234 Identities=9% Similarity=0.037 Sum_probs=174.3
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec---------CCcc---------cccccc
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV---------SEGN---------YLPYHM 93 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~---------~~~~---------~~~~~~ 93 (312)
|+..+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++. ..+..+
T Consensus 63 wd~~~~~~~~~~~--~~~v~~~~~~~~---------~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 131 (343)
T 3lrv_A 63 TQLKDSKTITTIT--TPNPRTGGEHPA---------IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYM 131 (343)
T ss_dssp EEESSSSCEEEEE--EECCCTTCCCCS---------EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEE
T ss_pred EECCCCcEEEEEe--cCCceeeeeCCc---------eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEE
Confidence 9999998888887 456666666553 9999999999999765 3321 124556
Q ss_pred cCCC--CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCcee
Q psy15191 94 RDDS--KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI 170 (312)
Q Consensus 94 ~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~ 170 (312)
.+++ ++.++++++.|+.|++||+++.+.. .... ..+...+.+++|+|++.+|++|+.||.|++ |+++.+..
T Consensus 132 ~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~--~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNRGTIGFQSYEDDSQY--IVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ECCC---CCEEEEEETTCCEEEEESSSSCEE--EEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred EcCCCCCCCEEEEEeCCCcEEEEECCCCcEE--EEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 6677 8889999999999999999985532 1111 235557999999999999999999999999 88887776
Q ss_pred -eeecc-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceee--EEEEEcCCCceEEEecc
Q psy15191 171 -QTLPC-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII--WGVAWSHDSRYFLTISR 246 (312)
Q Consensus 171 -~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~ 246 (312)
..+.. |...|.+++|+|++.+|++++ |+.|++||+++.+....+..... +...+ .+++|+|++++|++++.
T Consensus 206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTI----PEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC---------CCEEEEECTTSSEEEEEET
T ss_pred ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccc----ccccccceEEEECCCCCEEEEecC
Confidence 66776 999999999999999999999 55999999998765543332111 22223 46999999999999988
Q ss_pred -CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc---CCCeEEEEecCCC
Q psy15191 247 -DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH---DGTLLASACKATK 303 (312)
Q Consensus 247 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~s~d~~ 303 (312)
|+.|++|++..... .|.. .++..++|++ +...|++++.|+.
T Consensus 281 ~d~~i~v~~~~~~~~--------~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTK--------NWTK--------DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp TTTEEEEEEECTTTC--------SEEE--------EEEEECCC----CCCCEEEEEEETTE
T ss_pred CCCcEEEEEEccccc--------ceEe--------cCceeEecCccccccceeEEEecCCc
Confidence 99999999976532 1222 4567777877 7778888855544
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=6.7e-29 Score=200.11 Aligned_cols=233 Identities=16% Similarity=0.212 Sum_probs=186.1
Q ss_pred ceEeCCCCeEEEEec--cCCCceEEEE-------------------EeCCCCceEEEEccccCcEEEEEEecCcCcCCCC
Q psy15191 7 DVVNGEGGKVLYTLT--NHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEH 65 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~--~h~~~v~~~~-------------------w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 65 (312)
+||+..+|+.+.++. +|...|.+++ |+..+++++..+.+|...+.++.+. +
T Consensus 48 ~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--------~ 119 (318)
T 4ggc_A 48 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--------S 119 (318)
T ss_dssp EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--------T
T ss_pred EEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--------C
Confidence 689999999888765 6788899998 5555578888999999988877654 4
Q ss_pred ceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT 136 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 136 (312)
..+++++.++.+++|+....... .+......+.+.++++++.|+.|++||+++.+..... ......+.
T Consensus 120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~ 196 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP---LQTFTQHQ 196 (318)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC---SEEECCCC
T ss_pred CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc---eeeecccC
Confidence 58999999999999998776441 2334445677889999999999999999875432211 11223567
Q ss_pred cceeEEEECCCCCeE---EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cCCeEEEEEccCCC
Q psy15191 137 LGFYGCKFGPRGDYI---IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSG 210 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l---~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~ 210 (312)
..+.+++++|.+..+ ++++.++.|++ |.......... .+...+..+.|+|++..+++++ .|+.|++||+++.+
T Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence 789999999977654 35667899999 66655555444 4778899999999999887765 79999999999999
Q ss_pred eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
.+..+.+ |...|++++|+|++++||+|+.||.|+|||+.+.
T Consensus 276 ~~~~l~g-------H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 276 KVAELKG-------HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEECC-------CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEEcC-------CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9888876 8899999999999999999999999999998764
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.1e-28 Score=201.28 Aligned_cols=240 Identities=11% Similarity=0.091 Sum_probs=188.7
Q ss_pred EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc-------ccccccCCCCCceE
Q psy15191 31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHL 102 (312)
Q Consensus 31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l 102 (312)
.|+.++++.+..+..|. .+.+++|+|+ ++++ ++++.|+.|++||+.+++.. .+....+++++.++
T Consensus 16 v~d~~~~~~~~~~~~~~-~~~~~~~s~d------g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l 88 (391)
T 1l0q_A 16 VIDVTSNKVTATIPVGS-NPMGAVISPD------GTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQV 88 (391)
T ss_dssp EEETTTTEEEEEEECSS-SEEEEEECTT------SSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred EEECCCCeEEEEeecCC-CcceEEECCC------CCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEE
Confidence 39999999999998775 5899999999 8766 78889999999999887663 23345567777777
Q ss_pred E-EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191 103 L-SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLT 179 (312)
Q Consensus 103 ~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~ 179 (312)
+ +++.++.|++||+.+.+. ..... +...+.+++|+|+++.+ ++++.++.|++ |+.+.+....+..+ ..
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~--~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~ 159 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTV--AGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RS 159 (391)
T ss_dssp EEEETTTTEEEEEETTTTEE--EEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SS
T ss_pred EEEECCCCEEEEEECCCCeE--EEEEe------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CC
Confidence 5 555679999999998543 22222 23457999999999987 67778999999 88888777777644 55
Q ss_pred eeEEEECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec---cCCeEEEEec
Q psy15191 180 ITQLAFSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGL 255 (312)
Q Consensus 180 v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~ 255 (312)
+..++|+|+++++ ++++.++.|++||+++.+....+. +...+.+++|+|++++|++++ .++.|++||+
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--------cCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 7999999999987 567788999999999887666655 455788999999999999887 6899999999
Q ss_pred CCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeE-EEEecCCCcccceEEeC
Q psy15191 256 GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLL-ASACKATKPEHAAIIIW 312 (312)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~s~d~~~~dg~i~iW 312 (312)
..+. .+..+..|. .+.+++|+|+|++| +++ +.|+.|++|
T Consensus 232 ~~~~------------~~~~~~~~~-~~~~~~~s~dg~~l~~s~-----~~d~~v~v~ 271 (391)
T 1l0q_A 232 GTNK------------ITARIPVGP-DPAGIAVTPDGKKVYVAL-----SFXNTVSVI 271 (391)
T ss_dssp TTTE------------EEEEEECCS-SEEEEEECTTSSEEEEEE-----TTTTEEEEE
T ss_pred CCCe------------EEEEEecCC-CccEEEEccCCCEEEEEc-----CCCCEEEEE
Confidence 8762 455566554 47899999999877 566 455669987
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.5e-28 Score=204.35 Aligned_cols=241 Identities=13% Similarity=0.033 Sum_probs=187.1
Q ss_pred EeCCCCceEE-----EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCC
Q psy15191 32 WNGEGGKVLY-----TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSK 98 (312)
Q Consensus 32 w~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~ 98 (312)
|+..+++.+. .+.+|...|.+++|+|+ +.++++++.|+.|++||+.+++.. .+....++++
T Consensus 149 ~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (433)
T 3bws_A 149 LDINSGQTVRLSPPEKYKKKLGFVETISIPEH------NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI 222 (433)
T ss_dssp EETTTCCEEEECCCHHHHTTCCEEEEEEEGGG------TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT
T ss_pred EECCCCeEeeecCcccccccCCceeEEEEcCC------CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC
Confidence 7777777776 45578899999999988 899999999999999999886652 2333445667
Q ss_pred CceEE-EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee--------cCCeEEE-ecccCc
Q psy15191 99 QLHLL-SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--------FQGSLHL-DVTTWK 168 (312)
Q Consensus 99 ~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~~i~~-d~~~~~ 168 (312)
+..++ +++.++.|++||+++.+ ...... ....+.+++|+|+++.+++++ .|+.|++ |+.+.+
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKTKL--EIRKTD------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTE--EEEECC------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred CCEEEEEecCCCcEEEEECCCCc--EEEEec------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 76674 55589999999998743 222222 234589999999999999888 4788988 777776
Q ss_pred eeeeecccCCceeEEEECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-
Q psy15191 169 QIQTLPCHQLTITQLAFSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR- 246 (312)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~- 246 (312)
..... .+...+..++|+|+++.+ ++++.|+.|++||+.+.+....+. +...+.+++|+|++++|++++.
T Consensus 295 ~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 295 LIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--------VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSSEEEEEECTTSSEEEEEECC
T ss_pred EEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--------CCCCCCeEEEcCCCCEEEEEecC
Confidence 66555 366688999999999755 566899999999999877666554 4566889999999998888776
Q ss_pred --------------CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 247 --------------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 247 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
||.|++||+.++. .+..+.. ...+.+++|+|+|++|++++ ..|+.|++|
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~~------------~~~~~~~-~~~~~~~~~s~dg~~l~~~~----~~d~~i~v~ 428 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTDT------------VKEFWEA-GNQPTGLDVSPDNRYLVISD----FLDHQIRVY 428 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTTE------------EEEEEEC-SSSEEEEEECTTSCEEEEEE----TTTTEEEEE
T ss_pred CCccccccccccccceEEEEEECCCCc------------EEEEecC-CCCCceEEEcCCCCEEEEEE----CCCCeEEEE
Confidence 5799999998762 4444544 55789999999999998885 235669998
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=3e-28 Score=204.54 Aligned_cols=204 Identities=20% Similarity=0.294 Sum_probs=163.2
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCcc---------------cccccccCCC-CC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGN---------------YLPYHMRDDS-KQ 99 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~---------------~~~~~~~~~~-~~ 99 (312)
.+.+..+.+|...|++++|+|+ +. +|++|+.||.|++|++..+.. ..+..+.+++ ++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 244 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPN------LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE 244 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTT------STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT
T ss_pred CCCcEEecCCCCCeEEEEeCCC------CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC
Confidence 3566778889999999999998 66 999999999999999987322 1233344455 56
Q ss_pred ceEEEEeCCCcEEEEcCCCCcc-eeeeeeeecccCCCccceeEEEECCCCC-eEEEeecCCeEEE-eccc-Cceeeeecc
Q psy15191 100 LHLLSCSMDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGFYGCKFGPRGD-YIIAHGFQGSLHL-DVTT-WKQIQTLPC 175 (312)
Q Consensus 100 ~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~-d~~~-~~~~~~~~~ 175 (312)
.+|++++.|+.|++||+++... ..... +..|...|.+++|+|+++ ++++|+.||.|++ |+++ ......+..
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~ 319 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNNNTSKPSHT-----VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 319 (430)
T ss_dssp TEEEEEETTSEEEEEETTCSCSSSCSEE-----EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCCCCcceeE-----eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec
Confidence 7899999999999999997531 11122 236788999999999987 5889999999999 7776 345666778
Q ss_pred cCCceeEEEECCCCC-EEEEEecCCeEEEEEccCC--------------CeEEEEeccCCCCcccceeeEEEEEcCCCc-
Q psy15191 176 HQLTITQLAFSPDDT-HLVSVSRDRRWGLYKRQSS--------------GRLSLVACSDKTNGVHKRIIWGVAWSHDSR- 239 (312)
Q Consensus 176 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~--------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 239 (312)
|...|.+++|+|++. +|++++.|+.|++||+... ..+..... |...|++++|+|+++
T Consensus 320 h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~~~p~~~~ 392 (430)
T 2xyi_A 320 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-------HTAKISDFSWNPNEPW 392 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-------CSSCEEEEEECSSSTT
T ss_pred CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-------CCCCceEEEECCCCCC
Confidence 999999999999985 6899999999999999873 22222222 778899999999999
Q ss_pred eEEEeccCCeEEEEecCCC
Q psy15191 240 YFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 240 ~l~s~~~dg~i~iwd~~~~ 258 (312)
+|++++.||.|+||++...
T Consensus 393 ~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 393 IICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEEETTSEEEEEEECHH
T ss_pred EEEEEECCCCEEEeEcccc
Confidence 8999999999999998654
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=7.2e-29 Score=203.78 Aligned_cols=236 Identities=15% Similarity=0.207 Sum_probs=178.4
Q ss_pred eCCCCeEEEEeccCCCceEEEEEeCCC--C---------------------ceE-EEEccccCcEEEEEEecCcCcCCCC
Q psy15191 10 NGEGGKVLYTLTNHKSKVMAVKWNGEG--G---------------------KVL-YTLTNHKSKVMAVKWVLNTSLDPEH 65 (312)
Q Consensus 10 ~~~~~~~~~~~~~h~~~v~~~~w~~~~--~---------------------~~~-~~~~~h~~~v~~~~~~~~~~~~~~~ 65 (312)
+....+.+..+.+|.+.|++++|+++. + +.+ ..+.+|...|++++|+|+ +
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~ 98 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD------G 98 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT------S
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC------C
Confidence 445567788888999999999988873 2 222 567789999999999999 8
Q ss_pred ceEEEecCCCcEEEeeecCCccc-------ccccccC--CCCCceEEEEeCCCcEEEEcCCCCcceeeeeee--------
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNY-------LPYHMRD--DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR-------- 128 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------- 128 (312)
++|++++.||.|++||+.+++.. .+..+.+ ++++.++++++.|+.|++||+++.+........
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 99999999999999999887752 2334444 778889999999999999999875533221110
Q ss_pred --------------------------ecccCCCccceeEEEECCCCCe----EEEeecCCeEEE-ecccC---ceeeeec
Q psy15191 129 --------------------------VGEVGGNTLGFYGCKFGPRGDY----IIAHGFQGSLHL-DVTTW---KQIQTLP 174 (312)
Q Consensus 129 --------------------------~~~~~~~~~~v~~~~~~~~~~~----l~~~~~~~~i~~-d~~~~---~~~~~~~ 174 (312)
............++++.++... +++++.+|.+++ +.+.. .....+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 0000112233455555555444 999999999999 55544 3344455
Q ss_pred ccCC------------ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEE
Q psy15191 175 CHQL------------TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242 (312)
Q Consensus 175 ~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 242 (312)
.|.. .|.+++|+|++++|++++.||.|++||+++.+.+..+.. |...|++++|+|++++|+
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-------LDQPISACCFNHNGNIFA 331 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-------CSSCEEEEEECTTSSCEE
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-------CCCCceEEEECCCCCeEE
Confidence 5655 799999999999999999999999999998877766654 788999999999999999
Q ss_pred EeccCCeEEEEecCCC
Q psy15191 243 TISRDGVCVVWGLGEP 258 (312)
Q Consensus 243 s~~~dg~i~iwd~~~~ 258 (312)
+++.|+..+.|++...
T Consensus 332 ~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 332 YASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEECCCSTTCGGGCCT
T ss_pred EEecccccccccccCC
Confidence 9999986666665443
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=6.2e-26 Score=188.15 Aligned_cols=228 Identities=15% Similarity=0.100 Sum_probs=176.0
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeC--------------------CCCceEEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNG--------------------EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK 66 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~--------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 66 (312)
.+|+..+++.+..+..|.. +.+++|++ .+++.+..+..+. .+.+++|+|+ ++
T Consensus 15 ~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd------g~ 86 (391)
T 1l0q_A 15 SVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD------GK 86 (391)
T ss_dssp EEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT------SS
T ss_pred EEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC------CC
Confidence 5788888998888887654 67777554 4456666666554 8999999998 88
Q ss_pred eE-EEecCCCcEEEeeecCCccc-------ccccccCCCCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191 67 DL-VSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 67 ~l-~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 137 (312)
+| ++++.|+.|++||+.+++.. .+....+++++..+ ++++.++.|++||+.+.+. ..... . ..
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-----~-~~ 158 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVS-----V-GR 158 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-----C-CS
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEe-----c-CC
Confidence 76 45667799999999887653 23344557777766 7888899999999987442 22222 1 23
Q ss_pred ceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCeE
Q psy15191 138 GFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGRL 212 (312)
Q Consensus 138 ~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~ 212 (312)
.+.+++|+|+++.+ ++++.++.|++ |+++.+....+. +...+.+++|+|++++|++++ .++.|++||+.+.+.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 46899999999987 56678899999 888877776665 567899999999999999888 6899999999988777
Q ss_pred EEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCCCC
Q psy15191 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~ 259 (312)
..+.. ...+.+++|+|++++| ++++.|+.|++||+.++.
T Consensus 238 ~~~~~--------~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 238 ARIPV--------GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEC--------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEec--------CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 66653 2347889999999877 677899999999998763
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-26 Score=193.58 Aligned_cols=245 Identities=12% Similarity=0.058 Sum_probs=188.2
Q ss_pred EeCCCC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------------cccccCC
Q psy15191 32 WNGEGG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------------PYHMRDD 96 (312)
Q Consensus 32 w~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------------~~~~~~~ 96 (312)
+++.++ +.+..+..+ ..+.+++|+|+ +.++++++.|+.|++||+.+++... +....+.
T Consensus 106 ~d~~~~~~~~~~~~~~~-~~~~~~~~s~~------~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~ 178 (433)
T 3bws_A 106 LDKEGITHRFISRFKTG-FQPKSVRFIDN------TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP 178 (433)
T ss_dssp CCBTTCSEEEEEEEECS-SCBCCCEESSS------SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG
T ss_pred ECCCCCcceEEEEEcCC-CCceEEEEeCC------CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc
Confidence 455444 566666655 44668999888 8899999999999999998876532 2223446
Q ss_pred CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeec
Q psy15191 97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLP 174 (312)
Q Consensus 97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~ 174 (312)
+++.++++++.|+.|++||+++.+. ..... .+...+.+++|+|+++.+++++ .++.|++ |+++.+....+.
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLKTLAY--KATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETTTCCE--EEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred CCCEEEEEECCCCEEEEEECCCceE--EEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 6778999999999999999987442 22222 5677899999999999886554 7899999 888777776666
Q ss_pred ccCCceeEEEECCCCCEEEEEe--------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEec
Q psy15191 175 CHQLTITQLAFSPDDTHLVSVS--------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS 245 (312)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~ 245 (312)
. ...+.+++|+|+++++++++ .|+.|++||+++.+....+. +...+.+++|+|+++. +++++
T Consensus 252 ~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 252 K-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--------PPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp C-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--------EEECEEEEEECSSTTEEEEEET
T ss_pred C-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--------CCCCcceEEECCCCCEEEEEec
Confidence 4 45699999999999999988 48899999999876665553 5567889999999975 56678
Q ss_pred cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC----------cccceEEeC
Q psy15191 246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK----------PEHAAIIIW 312 (312)
Q Consensus 246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~----------~~dg~i~iW 312 (312)
.|+.|++||+.++. .+..+ .+...+.+++|+|+|++|++++.+.. +.||.|++|
T Consensus 323 ~~~~v~v~d~~~~~------------~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 323 CCSKIEVYDLKEKK------------VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp TTTEEEEEETTTTE------------EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CCCEEEEEECCCCc------------EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 99999999998652 33444 36778999999999999988876421 126789987
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=8e-28 Score=199.53 Aligned_cols=163 Identities=13% Similarity=0.133 Sum_probs=122.2
Q ss_pred CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC--------CCCeEEEeecCCeEEE-eccc
Q psy15191 96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP--------RGDYIIAHGFQGSLHL-DVTT 166 (312)
Q Consensus 96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~~~~i~~-d~~~ 166 (312)
.+++.++++++.|++|++||.++++ .........+.+|...|.+++|+| ++++|++++.|+.|++ |+++
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~--~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNET--IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTE--EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCc--cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3455689999999999999998743 333334456779999999999998 7899999999999999 6655
Q ss_pred CceeeeecccCCceeEEEECCCC-CEEEEEecCCeEEEEEccCCCeEEEEeccCCC------------------Ccccce
Q psy15191 167 WKQIQTLPCHQLTITQLAFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------------------NGVHKR 227 (312)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------------~~~~~~ 227 (312)
......+..|...+.+++|+|++ .+|++++.|+.|++||+++.+........... ...|..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 55555566799999999999987 47999999999999999986654332211100 112667
Q ss_pred eeEEEEEc-CCCceEEEeccCCeEEEEecCCCCC
Q psy15191 228 IIWGVAWS-HDSRYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 228 ~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
.+.++.|+ |+++.|++++.|+.+++||+..+..
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 78889986 8999999999999999999987643
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.8e-27 Score=185.83 Aligned_cols=196 Identities=10% Similarity=0.066 Sum_probs=122.5
Q ss_pred eEeCCCCeEEEE-eccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191 8 VVNGEGGKVLYT-LTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSE 85 (312)
Q Consensus 8 v~~~~~~~~~~~-~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 85 (312)
+|+..+++.+.+ ..+|...|..++++++ |+.+..+.+|...+..++|+| + +++.+|++++.|++|+|||+.++
T Consensus 139 v~~l~~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~~----g~~~~LaSgS~D~TIkIWDl~TG 213 (356)
T 2w18_A 139 VLGLTKRRLVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEVQ----GMQEALLGTTIMNNIVIWNLKTG 213 (356)
T ss_dssp EEEETTTEEEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEEE----TSTTEEEEEETTSEEEEEETTTC
T ss_pred EEecCCCcEEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeeccC----CCCceEEEecCCCcEEEEECCCC
Confidence 444555555555 3455555555555443 445555555555555555555 2 22455555555555555555554
Q ss_pred cccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeE------------EE
Q psy15191 86 GNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI------------IA 153 (312)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~ 153 (312)
+.... +.. -..+...+.+++|+|+++++ ++
T Consensus 214 k~l~t------------------------------------L~g--~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 214 QLLKK------------------------------------MHI--DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp CEEEE------------------------------------EEC--CC---CCCEEEEEEETTEEEEEEC----------
T ss_pred cEEEE------------------------------------EcC--CCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 43221 110 00112245666778877765 56
Q ss_pred eecCCeEEE-ecccCceeeee-----cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191 154 HGFQGSLHL-DVTTWKQIQTL-----PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR 227 (312)
Q Consensus 154 ~~~~~~i~~-d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 227 (312)
|+.|+.+++ |..+.+....+ .+|...+.+..++ +.++++++.|++|+|||+.+++.+..+.+ |..
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~g-------H~~ 326 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPP-------VSD 326 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECC-------C--
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecC-------CCC
Confidence 778899999 77776665543 2565555444443 77899999999999999999999888875 554
Q ss_pred ee-EEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 228 II-WGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 228 ~v-~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
.+ ..++|+|+|++|++|+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 44 46899999999999999999999986
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=9e-27 Score=190.59 Aligned_cols=247 Identities=8% Similarity=0.048 Sum_probs=156.7
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEE-------E---------EccccCcEEEEEEecCcCcCCCCceE-E
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLY-------T---------LTNHKSKVMAVKWVLNTSLDPEHKDL-V 69 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~-------~---------~~~h~~~v~~~~~~~~~~~~~~~~~l-~ 69 (312)
.+++..+.+++..+..|...|.+++|++++..... . +..+...+..+++.++ ++.+ +
T Consensus 2 ~i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 75 (355)
T 3vu4_A 2 PLGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHR------TNYVAF 75 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTT------SSEEEE
T ss_pred CcccccccCCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCC------CCEEEE
Confidence 46777788888888899999999999887532211 0 1112234666777776 5565 6
Q ss_pred EecCCCcEEEeeecCCcccccc-------cccCCCC-----------------C------------------ceEEE--E
Q psy15191 70 SCSLDKTAILWKYVSEGNYLPY-------HMRDDSK-----------------Q------------------LHLLS--C 105 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~~~~~-------~~~~~~~-----------------~------------------~~l~~--~ 105 (312)
+++.|++|++||..+++..... ...++++ + ..++. +
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred EECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence 7888899999999877642100 0000110 0 13333 5
Q ss_pred eCCCcEEEEcCCCCcceee--------eeee-ecccCCCccceeEEEECCCCCeEEEeecCCe-EEE-ecccCceeeeec
Q psy15191 106 SMDKSIIVWAPDPTTGLWL--------ETAR-VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-LHL-DVTTWKQIQTLP 174 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~--------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-i~~-d~~~~~~~~~~~ 174 (312)
+.+|.|++||+.+...... ...+ ...+.+|...|.+++|+|++++|++++.|+. |++ |+++++....+.
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 7888888888876431000 0001 2345689999999999999999999999998 999 888888888887
Q ss_pred -c-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC-------C---------CCcccceeeEEEEEcC
Q psy15191 175 -C-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD-------K---------TNGVHKRIIWGVAWSH 236 (312)
Q Consensus 175 -~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------~---------~~~~~~~~v~~~~~~~ 236 (312)
+ |...|.+++|+|++++|++++.|+.|++||++............ . ...........++|+|
T Consensus 236 ~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 315 (355)
T 3vu4_A 236 RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS 315 (355)
T ss_dssp CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS
T ss_pred cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC
Confidence 5 99999999999999999999999999999997643211110000 0 0000122336789999
Q ss_pred CCceEEEeccCCeEEEEecCCCC
Q psy15191 237 DSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 237 ~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
++++|++++.||.+++|++..+.
T Consensus 316 d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 316 ESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SSEEEEEETTTTEEEEEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEEEEcCC
Confidence 99999999999999999987653
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=5.4e-25 Score=183.64 Aligned_cols=225 Identities=10% Similarity=0.009 Sum_probs=173.9
Q ss_pred EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC---cEEEeeecCCccc-------ccccccCCCCCc
Q psy15191 31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK---TAILWKYVSEGNY-------LPYHMRDDSKQL 100 (312)
Q Consensus 31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg---~i~vw~~~~~~~~-------~~~~~~~~~~~~ 100 (312)
.|+.++ ...+.+.+|...|.+++|+|+ |++|++++.|+ .|++||+.+++.. .+....++|++.
T Consensus 163 i~d~~g-~~~~~l~~~~~~v~~~~~Spd------g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 163 VSDYDG-YNQFVVHRSPQPLMSPAWSPD------GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEETTS-CSCEEEEEESSCEEEEEECTT------SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSS
T ss_pred EEcCCC-CCCEEEeCCCCcceeeEEcCC------CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCC
Confidence 377764 456778889999999999999 99999999875 9999999887653 233455688888
Q ss_pred eEE-EEeCCCc--EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC--eEEE-ecccCceeeee
Q psy15191 101 HLL-SCSMDKS--IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG--SLHL-DVTTWKQIQTL 173 (312)
Q Consensus 101 ~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-d~~~~~~~~~~ 173 (312)
.|+ +++.++. |++||+.+.+.. .+..+...+.+++|+|+|+.|++++. ++ .|.+ |+.+.+.. .+
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~--------~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l 306 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIR--------QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RI 306 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEE--------ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-EC
T ss_pred EEEEEEecCCCceEEEEECCCCCEE--------eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EE
Confidence 777 6666665 999999874421 12356677899999999999988876 44 5665 77666543 34
Q ss_pred cccCCceeEEEECCCCCEEEEEecC---CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--
Q psy15191 174 PCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-- 248 (312)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-- 248 (312)
..+...+..++|+|+|++|++++.+ ..|++||+.+.+... +.. +. .+.+++|+|+|++|++++.++
T Consensus 307 ~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~-------~~-~~~~~~~spdg~~l~~~s~~~~~ 377 (415)
T 2hqs_A 307 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSS-------TF-LDETPSLAPNGTMVIYSSSQGMG 377 (415)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCC-------SS-SCEEEEECTTSSEEEEEEEETTE
T ss_pred ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecC-------CC-CcCCeEEcCCCCEEEEEEcCCCc
Confidence 4567789999999999999988765 589999999776532 221 32 688999999999999988777
Q ss_pred -eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191 249 -VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293 (312)
Q Consensus 249 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 293 (312)
.|++||+... ....+.+|.+.|.+++|+|.-.
T Consensus 378 ~~l~~~d~~g~-------------~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 378 SVLNLVSTDGR-------------FKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEETTSC-------------CEEECCCSSSEEEEEEECCCCC
T ss_pred cEEEEEECCCC-------------cEEEeeCCCCCCcCCccccccc
Confidence 8999998754 5778889999999999999754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.7e-25 Score=186.69 Aligned_cols=251 Identities=11% Similarity=0.029 Sum_probs=182.1
Q ss_pred EEEEeC--CCCceE--EEEccccCcEEEEEEecCc--------CcCCCCceEEEecCC------CcEEEeeecCCccc--
Q psy15191 29 AVKWNG--EGGKVL--YTLTNHKSKVMAVKWVLNT--------SLDPEHKDLVSCSLD------KTAILWKYVSEGNY-- 88 (312)
Q Consensus 29 ~~~w~~--~~~~~~--~~~~~h~~~v~~~~~~~~~--------~~~~~~~~l~s~~~d------g~i~vw~~~~~~~~-- 88 (312)
...||. .+++++ ..+.+|...+..+++.+.. .-...+..++.++.+ +.|++||+......
T Consensus 95 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l 174 (415)
T 2hqs_A 95 YQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVV 174 (415)
T ss_dssp EEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEE
T ss_pred EEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEE
Confidence 345999 888887 5588998888888776510 000113456665554 79999999765431
Q ss_pred -----ccccccCCCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCe
Q psy15191 89 -----LPYHMRDDSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGS 159 (312)
Q Consensus 89 -----~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~ 159 (312)
.+....++|++..|++++.++ .|++||+.+++... . ..+...+.+++|+|+|+.|+ +++.++.
T Consensus 175 ~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~---l-----~~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 175 HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ---V-----ASFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE---E-----ECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE---e-----ecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 344456788999999999875 99999999854321 1 24556789999999999888 5555554
Q ss_pred --EEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CC--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191 160 --LHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DR--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA 233 (312)
Q Consensus 160 --i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 233 (312)
|++ |+.+.+. ..+..|...+.+++|+|||++|++++. ++ .|++||+.+.+... +.. +...+.+++
T Consensus 247 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~-------~~~~~~~~~ 317 (415)
T 2hqs_A 247 LNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITW-------EGSQNQDAD 317 (415)
T ss_dssp CEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCC-------SSSEEEEEE
T ss_pred ceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Eec-------CCCcccCeE
Confidence 776 7777665 455568889999999999999988876 44 68888988765432 221 556788999
Q ss_pred EcCCCceEEEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEE
Q psy15191 234 WSHDSRYFLTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAII 310 (312)
Q Consensus 234 ~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~ 310 (312)
|+|+|++|++++.+ ..|++||+.++ ....+..+. .+.+++|+|+|++|++++.++. ...|+
T Consensus 318 ~spdG~~l~~~~~~~g~~~i~~~d~~~~-------------~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~--~~~l~ 381 (415)
T 2hqs_A 318 VSSDGKFMVMVSSNGGQQHIAKQDLATG-------------GVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM--GSVLN 381 (415)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTC-------------CEEECCCSS-SCEEEEECTTSSEEEEEEEETT--EEEEE
T ss_pred ECCCCCEEEEEECcCCceEEEEEECCCC-------------CEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC--ccEEE
Confidence 99999999988764 58999999876 234455554 8899999999999999976542 22466
Q ss_pred eC
Q psy15191 311 IW 312 (312)
Q Consensus 311 iW 312 (312)
+|
T Consensus 382 ~~ 383 (415)
T 2hqs_A 382 LV 383 (415)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.2e-24 Score=173.08 Aligned_cols=240 Identities=13% Similarity=0.041 Sum_probs=175.5
Q ss_pred EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-Cccc---------ccccccCCCCC
Q psy15191 30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-EGNY---------LPYHMRDDSKQ 99 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-~~~~---------~~~~~~~~~~~ 99 (312)
..|+..+++.. .+..|...|.+++|+|+ +++|++++ ++.|++||+.+ ++.. .+....+++++
T Consensus 25 ~~~d~~~~~~~-~~~~~~~~v~~~~~spd------g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 25 EIFNIRTRKMR-VVWQTPELFEAPNWSPD------GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp EEEETTTTEEE-EEEEESSCCEEEEECTT------SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred EEEeCCCCcee-eeccCCcceEeeEECCC------CCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 34898888766 55568999999999999 99999886 78999999988 6542 22335567888
Q ss_pred ceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE---ecccCceeeee
Q psy15191 100 LHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL---DVTTWKQIQTL 173 (312)
Q Consensus 100 ~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~---d~~~~~~~~~~ 173 (312)
..+++++ .++...+|.++...... ... .....+..++|+|+++.++ ++..++.+.+ +..+... ..+
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~------~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~ 168 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGTP-RLM------TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRL 168 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCCC-EEC------CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EEC
T ss_pred CEEEEEEeCCCCcceEEEEECCCCce-EEe------ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEc
Confidence 8999988 33555555543221211 111 1222478899999999887 6778888877 3433333 344
Q ss_pred cccCCceeEEEECCCCCEEEEEe-cCCeEEEEEcc-CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC----
Q psy15191 174 PCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQ-SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD---- 247 (312)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---- 247 (312)
..+...+.+++|+|++++|+.++ .++.+++|++. .......+.. +...+..++|+|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-------SAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-------CSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-------CCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 46778899999999999888766 58999999987 3444443332 56778899999999999988765
Q ss_pred -------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 248 -------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 248 -------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
+.|++||+..+.. ..+..+.+|...+..++|+|+|++|++++.+.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNV----------ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSC----------EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccCceEEEEEecCCCCc----------eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999977632 13455567888999999999999999997654
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=3.1e-23 Score=178.21 Aligned_cols=281 Identities=7% Similarity=0.028 Sum_probs=197.0
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEE-------------------EeC--CCCceEEEEccccCcEEEEEEec----CcCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVK-------------------WNG--EGGKVLYTLTNHKSKVMAVKWVL----NTSL 61 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~-------------------w~~--~~~~~~~~~~~h~~~v~~~~~~~----~~~~ 61 (312)
.+|+..+++.+.++..+.. +..++ |+. .+++++.++. +...+..++|+| +
T Consensus 162 ~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~d--- 236 (543)
T 1nir_A 162 ALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYE--- 236 (543)
T ss_dssp EEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCT---
T ss_pred EEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCC---
Confidence 4677777777777763222 55554 666 5677777777 445688999998 8
Q ss_pred CCCCceEEEec-CCCcEEEeeecCCcccccc-------------------cccCCC-CCceEEEEeCCCcEEEEcCCCCc
Q psy15191 62 DPEHKDLVSCS-LDKTAILWKYVSEGNYLPY-------------------HMRDDS-KQLHLLSCSMDKSIIVWAPDPTT 120 (312)
Q Consensus 62 ~~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~-------------------~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~ 120 (312)
|++|++++ .+++|.+||..+.+..... ....++ ...++++...++.|.+||+.+.+
T Consensus 237 ---g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 237 ---DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp ---TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred ---CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 89998887 4899999998887653221 112233 33456777888999999998754
Q ss_pred ceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecc----cCCceeEEEECCC-CCEEE
Q psy15191 121 GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPD-DTHLV 193 (312)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~ 193 (312)
........ +...+.++.|+|+++++++++ .++.|.+ |..+.++...+.. |.+....+ ++|+ +..++
T Consensus 314 ~l~~~~i~------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~ 386 (543)
T 1nir_A 314 NLTVTSIG------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWS 386 (543)
T ss_dssp SCEEEEEE------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEE
T ss_pred cceeEEec------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEE
Confidence 33222222 234577899999999877655 5788888 9999888877663 55444443 4677 66666
Q ss_pred EEe-cCCeEEEEEccC-------CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-------cCCeEEEEecCCC
Q psy15191 194 SVS-RDRRWGLYKRQS-------SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-------RDGVCVVWGLGEP 258 (312)
Q Consensus 194 ~~~-~d~~i~~wd~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~ 258 (312)
++. .|++|.+||+.+ .+.+..+.. +...+..++++|++++|++++ .++.|.+||+.+.
T Consensus 387 s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~-------~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 387 TSHLGDGSISLIGTDPKNHPQYAWKKVAELQG-------QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp EEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-------SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred eccCCCceEEEEEeCCCCCchhcCeEEEEEEc-------CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 665 589999999988 677777775 556677899999999999987 3679999999987
Q ss_pred CCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 259 PTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...........| ..+..+...+..++|+|+|+.|.++...++++|+.|.||
T Consensus 460 ~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~ 510 (543)
T 1nir_A 460 DAKYQVLPIAEW---ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVV 510 (543)
T ss_dssp TSCCEEECHHHH---HCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEE
T ss_pred CCCeEEeechhh---cccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEE
Confidence 532110000000 012356778999999999999998866555567889887
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.2e-22 Score=165.20 Aligned_cols=269 Identities=11% Similarity=0.116 Sum_probs=174.7
Q ss_pred eEEEEeccCCCceEEEEEeCC-CC--ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC-CcEEEeeec--CCccc
Q psy15191 15 KVLYTLTNHKSKVMAVKWNGE-GG--KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD-KTAILWKYV--SEGNY 88 (312)
Q Consensus 15 ~~~~~~~~h~~~v~~~~w~~~-~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-g~i~vw~~~--~~~~~ 88 (312)
+.++......+.|.. |+.+ ++ +.+..+ .|...+.+++|+|+ +++|++++.+ +.|++|++. ++...
T Consensus 5 ~~l~~~~~~~~~v~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~spd------g~~l~~~~~~~~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 5 QTVYIASPESQQIHV--WNLNHEGALTLTQVV-DVPGQVQPMVVSPD------KRYLYVGVRPEFRVLAYRIAPDDGALT 75 (343)
T ss_dssp EEEEEEEGGGTEEEE--EEECTTSCEEEEEEE-ECSSCCCCEEECTT------SSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEEeCCCCCeEEE--EEECCCCcEEEeeeE-ecCCCCceEEECCC------CCEEEEeecCCCeEEEEEecCCCCcee
Confidence 445554444555533 5543 33 333333 47778999999999 8888888776 999999997 44421
Q ss_pred ---------ccccccCCCCCceEEEEe-CCCcEEEEcCCCCcc-eeeeeeeecccCCCccceeEEEECCCCCeEEEee-c
Q psy15191 89 ---------LPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTG-LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-F 156 (312)
Q Consensus 89 ---------~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 156 (312)
.+..+.+++++.++++++ .++.|.+||+..+.. ...... .....+.+++|+|+++++++++ .
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 76 FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV------EGLDGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp EEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE------CCCTTBCCCEECTTSSEEEEEEGG
T ss_pred eccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc------cCCCCceEEEECCCCCEEEEecCC
Confidence 233344577887776665 488899999852211 111111 1233578899999999888877 8
Q ss_pred CCeEEE-eccc-Cceee----eec-ccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccC--CCe--EEEEeccCCCCcc
Q psy15191 157 QGSLHL-DVTT-WKQIQ----TLP-CHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQS--SGR--LSLVACSDKTNGV 224 (312)
Q Consensus 157 ~~~i~~-d~~~-~~~~~----~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~ 224 (312)
++.+.+ |+.+ .++.. ... .....+..++|+|+++++++++ .++.|.+||+.. ... ........ ....
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~-~~~~ 228 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP-ENFS 228 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC-TTCC
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC-cccc
Confidence 899998 6665 43332 122 2345788999999999776554 789999999964 222 12222111 0001
Q ss_pred cceeeEEEEEcCCCceEE-EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 225 HKRIIWGVAWSHDSRYFL-TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 225 ~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
....+..++|+|++++|+ ++..++.|.+||+...... .+.+..+..+.. +.+++|+|+|++|++++
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~--------~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~---- 295 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV--------LSKEGFQPTETQ-PRGFNVDHSGKYLIAAG---- 295 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC--------EEEEEEEECSSS-CCCEEECTTSSEEEEEC----
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc--------eEEeeeecCCCc-cceEEECCCCCEEEEec----
Confidence 234567899999998777 5557999999999742111 113444544444 88999999999888885
Q ss_pred cccceEEeC
Q psy15191 304 PEHAAIIIW 312 (312)
Q Consensus 304 ~~dg~i~iW 312 (312)
..++.|.+|
T Consensus 296 ~~~~~v~v~ 304 (343)
T 1ri6_A 296 QKSHHISVY 304 (343)
T ss_dssp TTTCEEEEE
T ss_pred CCCCeEEEE
Confidence 245568887
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=5.3e-23 Score=176.77 Aligned_cols=275 Identities=8% Similarity=0.067 Sum_probs=193.4
Q ss_pred EEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee--cCCccc------
Q psy15191 17 LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY--VSEGNY------ 88 (312)
Q Consensus 17 ~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~--~~~~~~------ 88 (312)
++......+.| ..||..+++++.++..+.. +..++|+|+ |++|++++.|++|++||+ .+++..
T Consensus 151 ~~vs~~~d~~V--~v~D~~t~~~~~~i~~g~~-~~~v~~spd------g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g 221 (543)
T 1nir_A 151 FSVTLRDAGQI--ALVDGDSKKIVKVIDTGYA-VHISRMSAS------GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG 221 (543)
T ss_dssp EEEEEGGGTEE--EEEETTTCCEEEEEECSTT-EEEEEECTT------SCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred EEEEEcCCCeE--EEEECCCceEEEEEecCcc-cceEEECCC------CCEEEEECCCCeEEEEECcCCCCcEEEEEecC
Confidence 33444444444 3389999999999984333 899999999 999999999999999999 666542
Q ss_pred -ccccccCCC----CCceEEEEe-CCCcEEEEcCCCCcceeeeeeeecc--cC----CCccceeEEEECCCCCe-EEEee
Q psy15191 89 -LPYHMRDDS----KQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGE--VG----GNTLGFYGCKFGPRGDY-IIAHG 155 (312)
Q Consensus 89 -~~~~~~~~~----~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~--~~----~~~~~v~~~~~~~~~~~-l~~~~ 155 (312)
.+..+.+++ ++.++++++ .+++|.+||..+.+. +....... .. .....+.++.++|++.. +++..
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 233445577 888888887 489999999987543 33332211 00 11236889999997765 45566
Q ss_pred cCCeEEE-ecccCceee--eecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191 156 FQGSLHL-DVTTWKQIQ--TLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG 231 (312)
Q Consensus 156 ~~~~i~~-d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~ 231 (312)
.++.|.+ |..+.+... .+ .+...+..+.|+|+|++|++++ .+++|.+||+.+++....+...... |......
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p---h~g~g~~ 375 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP---HPGRGAN 375 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB---CCTTCEE
T ss_pred CCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCC---CCCCCcc
Confidence 7888988 766654433 33 3566788999999999877654 5899999999998877766642211 3322222
Q ss_pred EEEcCC-CceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc--ccc
Q psy15191 232 VAWSHD-SRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP--EHA 307 (312)
Q Consensus 232 ~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~--~dg 307 (312)
+ ++|+ +.+++++. .|++|.+||+...... ...|+.++++.+|...+..++|+|+|++|.+++.-+.. .++
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~-----~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP-----QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQ 449 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHT
T ss_pred c-CCCCCccEEEeccCCCceEEEEEeCCCCCc-----hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCc
Confidence 3 4677 66777775 6899999999874221 22356899999999999999999999999998632110 255
Q ss_pred eEEeC
Q psy15191 308 AIIIW 312 (312)
Q Consensus 308 ~i~iW 312 (312)
+|.||
T Consensus 450 ~v~v~ 454 (543)
T 1nir_A 450 SVAVF 454 (543)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 68887
No 133
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=5.6e-22 Score=161.75 Aligned_cols=269 Identities=9% Similarity=0.058 Sum_probs=174.6
Q ss_pred CCceEEEEEeCCCCceEE-EEccccCcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecCCcc----------cc
Q psy15191 24 KSKVMAVKWNGEGGKVLY-TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVSEGN----------YL 89 (312)
Q Consensus 24 ~~~v~~~~w~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~~~~----------~~ 89 (312)
...|..+.|+..+++... ....+...+..++|+|+ |+ |++++. ++.|.+|++.++.. ..
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spd------g~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAK------DC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTT------CE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccC------Ce-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC
Confidence 445777778888887654 34456677888999998 88 555443 68999999976653 12
Q ss_pred cccccCCCCCceEEEEe-CCCcEEEEcCCCC-cceeeeeeeeccc----CCCccceeEEEECCCCCeEEEeecCCeEEE-
Q psy15191 90 PYHMRDDSKQLHLLSCS-MDKSIIVWAPDPT-TGLWLETARVGEV----GGNTLGFYGCKFGPRGDYIIAHGFQGSLHL- 162 (312)
Q Consensus 90 ~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~-~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~- 162 (312)
+..+.+++++.+|++++ .++.|.+|++... ....+........ ......+.+++|+|+++.+++...++.+.+
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 33445577888788777 7789999999632 2222222211000 012235788999999996666666888888
Q ss_pred ecc-cCceeee--ecc-cCCceeEEEECCCCCEEEE-EecCCeEEEEEccCC-CeEEEEec-cC-CCCcccceeeEEEEE
Q psy15191 163 DVT-TWKQIQT--LPC-HQLTITQLAFSPDDTHLVS-VSRDRRWGLYKRQSS-GRLSLVAC-SD-KTNGVHKRIIWGVAW 234 (312)
Q Consensus 163 d~~-~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~-~~~~~~~~-~~-~~~~~~~~~v~~~~~ 234 (312)
++. +..+... +.. ....+..++|+|||+++++ ...++.|.+|++... ..+..... .. .........+..++|
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL 247 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE
Confidence 555 3332211 121 2336788999999996666 456789999998852 22221111 10 000012245889999
Q ss_pred cCCCceEE-EeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 235 SHDSRYFL-TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 235 ~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+|+|++|+ +...++.|.+|++..... .+.+..+..+...+..++|+|+|++|++++. .++.|.+|
T Consensus 248 spdG~~l~v~~~~~~~v~v~~~~~~g~---------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~----~~~~v~v~ 313 (347)
T 3hfq_A 248 SHDGHFLYVSNRGYNTLAVFAVTADGH---------LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ----NTDNATLY 313 (347)
T ss_dssp CTTSCEEEEEEETTTEEEEEEECGGGC---------EEEEEEEECSSSCCCEEEECTTSSEEEEEET----TTTEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEECCCCc---------EEEeEEEecCCCCcCeEEECCCCCEEEEEEc----CCCcEEEE
Confidence 99999874 555689999999874211 1245566666777899999999998888863 33557776
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=5.3e-22 Score=160.73 Aligned_cols=260 Identities=10% Similarity=0.055 Sum_probs=174.5
Q ss_pred CeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCcc-c---
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGN-Y--- 88 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~-~--- 88 (312)
+..++......+.| ..|+..+++.+..+..+...+ .++|+|+ ++++++++ .++.|.+||..+++. .
T Consensus 9 ~~~~~v~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~-~~~~s~d------g~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 9 SNFGIVVEQHLRRI--SFFSTDTLEILNQITLGYDFV-DTAITSD------CSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCEEEEEEGGGTEE--EEEETTTCCEEEEEECCCCEE-EEEECSS------SCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred CCEEEEEecCCCeE--EEEeCcccceeeeEEccCCcc-eEEEcCC------CCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 34444444344444 338999999998888777777 9999998 87665554 488999999988775 2
Q ss_pred ----cccc-ccCCCCCceEEEEeCCC---cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCe
Q psy15191 89 ----LPYH-MRDDSKQLHLLSCSMDK---SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGS 159 (312)
Q Consensus 89 ----~~~~-~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~ 159 (312)
.... ..+++++.+++++..++ .|.+||+.+.+. ..... ....+.+++|+|+|+++++++ .++.
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~~------~~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--ISTIP------IPYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EEEEE------CCTTEEEEEECTTSSCEEEEEETTTT
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EEEEE------CCCCccceEECCCCCEEEEEecCCCc
Confidence 2233 45678888888555553 899999987443 22222 123468999999998766654 4466
Q ss_pred -EEE-ecccCcee----eeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCe---EEEEeccCCCCcccceee
Q psy15191 160 -LHL-DVTTWKQI----QTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGR---LSLVACSDKTNGVHKRII 229 (312)
Q Consensus 160 -i~~-d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~v 229 (312)
+.+ ++...... ............++|+|+|++++.+ ..++.|++||+.+.+. +..+. ....+
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~ 223 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--------TNNLP 223 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--------CSSCC
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--------CCCCC
Confidence 877 33221111 1111344567899999999966555 4689999999998877 55555 33456
Q ss_pred EEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeecc----Ccc---eeEEEeccCCCeEEEEecC
Q psy15191 230 WGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYE---IYSLAASHDGTLLASACKA 301 (312)
Q Consensus 230 ~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---v~~~~~s~~~~~l~s~s~d 301 (312)
..++|+|+|++|+.++ .++.|.+||+.++... .+..+..+ ... ...++|+|+|++|++++
T Consensus 224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-- 291 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS----------FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISA-- 291 (331)
T ss_dssp CCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----------EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE--
T ss_pred ceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----------eecccccccccCCCCcccccceEECCCCCEEEEec--
Confidence 7899999999776554 5778999999876321 12222211 222 35689999999887665
Q ss_pred CCcccceEEeC
Q psy15191 302 TKPEHAAIIIW 312 (312)
Q Consensus 302 ~~~~dg~i~iW 312 (312)
..++.|.+|
T Consensus 292 --~~~~~v~v~ 300 (331)
T 3u4y_A 292 --NISRELKVF 300 (331)
T ss_dssp --TTTTEEEEE
T ss_pred --CCCCcEEEE
Confidence 345568887
No 135
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=4.7e-21 Score=157.16 Aligned_cols=267 Identities=13% Similarity=0.142 Sum_probs=170.5
Q ss_pred CCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC----CcEEEeeecCC--ccc--------
Q psy15191 23 HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD----KTAILWKYVSE--GNY-------- 88 (312)
Q Consensus 23 h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d----g~i~vw~~~~~--~~~-------- 88 (312)
....|....++..+++.......+...+..++|+|+ +++|++++.+ +.|.+|++... ...
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spd------g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~ 98 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSAD------GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM 98 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTT------SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCC------CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC
Confidence 345788888888888765443337778889999999 8999888875 79999998763 221
Q ss_pred --ccccccCCCCCceEEEEe-CCCcEEEEcCCCCccee-eeee-eec-----ccCCCccceeEEEECCCCCeEEEee-cC
Q psy15191 89 --LPYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTGLW-LETA-RVG-----EVGGNTLGFYGCKFGPRGDYIIAHG-FQ 157 (312)
Q Consensus 89 --~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~-~~~~-~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~-~~ 157 (312)
....... ++.++++++ .++.|.+|++....... .... ... ....+...+.+++|+|++++++++. .+
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence 1111222 455555554 67899999987532211 1000 000 0011233468899999999776655 47
Q ss_pred CeEEE-ecccCc-------ee------eeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191 158 GSLHL-DVTTWK-------QI------QTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTN 222 (312)
Q Consensus 158 ~~i~~-d~~~~~-------~~------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~ 222 (312)
+.+.+ ++.... +. .....+......++|+|||+++++++ .++.|.+||+.++............
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~- 255 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT- 255 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS-
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC-
Confidence 78887 443222 11 11123455678999999999887777 6899999999855332221111110
Q ss_pred cccceeeEEEEEcCCCceEEEecc--CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 223 GVHKRIIWGVAWSHDSRYFLTISR--DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
.+...+..++|+|+|++|+++.. ++.|.+|++...... .+.+..+.. ...+.+++|+|+|++|++++.
T Consensus 256 -~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~--------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 256 -VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT--------LTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp -SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC--------EEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred -CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc--------EEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 13344679999999999876665 489999999632110 113344444 557889999999999988862
Q ss_pred CCCcccceEEeC
Q psy15191 301 ATKPEHAAIIIW 312 (312)
Q Consensus 301 d~~~~dg~i~iW 312 (312)
.++.|.+|
T Consensus 326 ----~~~~v~v~ 333 (361)
T 3scy_A 326 ----DTNVIQIF 333 (361)
T ss_dssp ----TTTEEEEE
T ss_pred ----CCCCEEEE
Confidence 34557775
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.8e-22 Score=179.81 Aligned_cols=236 Identities=8% Similarity=0.038 Sum_probs=163.8
Q ss_pred EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC-----Ccccc----------------------cccccC
Q psy15191 43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS-----EGNYL----------------------PYHMRD 95 (312)
Q Consensus 43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~-----~~~~~----------------------~~~~~~ 95 (312)
+..+...+.+++|+|+ |+.|+++ .|+.|++|++.+ ++... +....+
T Consensus 116 l~~~~~~~~~~~~Spd------G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 116 LFDTNEETASLDFSPV------GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW 188 (706)
T ss_dssp EECCTTCCTTCEECTT------SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE
T ss_pred ccCCcccccCCcCCCC------CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE
Confidence 3445667778888888 9999885 689999999988 65421 234557
Q ss_pred CCCCceEEEEe---------------------------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEE
Q psy15191 96 DSKQLHLLSCS---------------------------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC 142 (312)
Q Consensus 96 ~~~~~~l~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~ 142 (312)
+|++.+|++++ .+..|++||+.+++...+. ....+...+.++
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~-----~~~~~~~~~~~~ 263 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ-----TGEPKEKFLTNL 263 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-----CCSCTTCEEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-----cCCCCceeEeeE
Confidence 88999999887 4467999999875422111 112456678999
Q ss_pred EECCCCCeEEEeecCC-----eEEE-ecccC-ceeeeec-ccCC---ceeEEEECC--CCCEEEEEecCCeEEEEEcc-C
Q psy15191 143 KFGPRGDYIIAHGFQG-----SLHL-DVTTW-KQIQTLP-CHQL---TITQLAFSP--DDTHLVSVSRDRRWGLYKRQ-S 208 (312)
Q Consensus 143 ~~~~~~~~l~~~~~~~-----~i~~-d~~~~-~~~~~~~-~~~~---~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~-~ 208 (312)
+|+|+|+.|++++.++ .+.+ |..+. ....... .+.. .+..++|+| ||+++++++.|+.+++|++. +
T Consensus 264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~ 343 (706)
T 2z3z_A 264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT 343 (706)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT
T ss_pred EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC
Confidence 9999999999887665 6777 77777 3332222 1222 246789999 99999999999999999887 4
Q ss_pred CCeEEEEeccCCCCcccceeeEE-EEEcCCCceEEEec-cCC----eEEEEecCCCCCCcccccccccceeEEeeccCcc
Q psy15191 209 SGRLSLVACSDKTNGVHKRIIWG-VAWSHDSRYFLTIS-RDG----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE 282 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~-~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (312)
.+....+.. +...+.. ++|+|+++.|+.++ .++ .|+.||+..+. ...+. |...
T Consensus 344 ~~~~~~l~~-------~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-------------~~~l~-~~~~ 402 (706)
T 2z3z_A 344 GRLIRQVTK-------GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-------------TKDLT-PESG 402 (706)
T ss_dssp SCEEEECCC-------SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-------------CEESC-CSSS
T ss_pred CCEEEecCC-------CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-------------ceecc-CCCc
Confidence 454444433 4455666 79999998776554 444 66666766542 22232 5667
Q ss_pred eeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 283 IYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 283 v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+.+++|+|+|++|+..+.+.. ..+.|++|
T Consensus 403 ~~~~~~spdg~~l~~~~~~~~-~p~~i~l~ 431 (706)
T 2z3z_A 403 MHRTQLSPDGSAIIDIFQSPT-VPRKVTVT 431 (706)
T ss_dssp EEEEEECTTSSEEEEEEECSS-CSCEEEEE
T ss_pred eEEEEECCCCCEEEEEecCCC-CCcEEEEE
Confidence 899999999999887754321 23557765
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=3.6e-22 Score=178.32 Aligned_cols=277 Identities=12% Similarity=0.057 Sum_probs=180.1
Q ss_pred eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccC---cEEEEEEecCcCcCCCCceEEEecCC---------C
Q psy15191 8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKS---KVMAVKWVLNTSLDPEHKDLVSCSLD---------K 75 (312)
Q Consensus 8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~l~s~~~d---------g 75 (312)
+.-..+|+.+++ +..+.| ..|+..+++....+.+|.. .|.+++|+|+ |++|++++.+ +
T Consensus 22 ~~~spdg~~~~~--~~dg~i--~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpD------g~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 22 AKWISDTEFIYR--EQKGTV--RLWNVETNTSTVLIEGKKIESLRAIRYEISPD------REYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCBSSSSCBCCC--CSSSCE--EEBCGGGCCCEEEECTTTTTTTTCSEEEECTT------SSEEEEEESCCCCSSSCCCS
T ss_pred cEEcCCCcEEEE--eCCCCE--EEEECCCCcEEEEeccccccccccceEEECCC------CCEEEEEecCccceeeccee
Confidence 333445675543 344433 4599999999888888765 4999999999 9999998764 7
Q ss_pred cEEEeeecCCccc----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeeccc--CCC--------
Q psy15191 76 TAILWKYVSEGNY----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV--GGN-------- 135 (312)
Q Consensus 76 ~i~vw~~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~-------- 135 (312)
.+.+||+.+++.. .+....++|++..|+.++. +.|++||+.+++...+........ .++
T Consensus 92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 8889999887651 1345667899999998886 789999998754332221100000 000
Q ss_pred -ccceeEEEECCCCCeEEEeecCC----------------------------------eEEE-ecccCceeeeeccc---
Q psy15191 136 -TLGFYGCKFGPRGDYIIAHGFQG----------------------------------SLHL-DVTTWKQIQTLPCH--- 176 (312)
Q Consensus 136 -~~~v~~~~~~~~~~~l~~~~~~~----------------------------------~i~~-d~~~~~~~~~~~~~--- 176 (312)
...+.+++|+|||+.|++++.++ .+++ |+.+.+....+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP 250 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC
Confidence 11337899999999999887553 5666 66666544444433
Q ss_pred ---CCceeEEEECCCCCEEEEEec----CCeEEEEEccCCCeEEEEeccCCCCcccceee----EEEEEcCCCceEEE--
Q psy15191 177 ---QLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRII----WGVAWSHDSRYFLT-- 243 (312)
Q Consensus 177 ---~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~s-- 243 (312)
...+..++|+|||+++++.+. +..|++||+.+++....+... +...+ ..++|+|||+.|+.
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~------~~~~~~~~~~~~~~spdg~~l~~~~ 324 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE------SEAWLHRQNEEPVFSKDGRKFFFIR 324 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE------CSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec------cCCEEeccCCCceEcCCCCeEEEEE
Confidence 567899999999998877653 357999999988766554432 22222 26899999998775
Q ss_pred eccCC------eEEEEecCCCCCCcccccccccceeEEeeccCcceeE-EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 244 ISRDG------VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS-LAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 244 ~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+..++ .|++||+..+.... +...+..+...+.. ++|+|||+.|+..+.+.. .+.++||
T Consensus 325 ~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~l~ 389 (723)
T 1xfd_A 325 AIPQGGRGKFYHITVSSSQPNSSND---------NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDL--PRRRQLY 389 (723)
T ss_dssp EECCSSSSCEEEEEEECSSCCSSSC---------CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSC--TTCCEEE
T ss_pred ecccCCCcceeEEEEEeccCCCCcc---------ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCC--CcceEEE
Confidence 44666 56666632222100 02223333333444 699999999987754410 1446665
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=2.1e-22 Score=186.42 Aligned_cols=257 Identities=10% Similarity=-0.024 Sum_probs=190.6
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCC-------------------CceEEEEccccCcEEEEEEecCcCcCCCCce
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 67 (312)
.+|....+.....+.+|...+.++.|+++. +.....+..|. .+...+|+|+ |+.
T Consensus 186 ~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpD------G~~ 258 (1045)
T 1k32_A 186 KIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTD------GRR 258 (1045)
T ss_dssp EEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEES------SSC
T ss_pred CEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCC------CCE
Confidence 344433334445557788888888877641 11122333333 3567788888 888
Q ss_pred EEEecCCCcEEEeeecCCccc------------------ccccccCC-CCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191 68 LVSCSLDKTAILWKYVSEGNY------------------LPYHMRDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR 128 (312)
Q Consensus 68 l~s~~~dg~i~vw~~~~~~~~------------------~~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 128 (312)
|+.+ .++.|.+|++...... .+....++ |++..+++++ ++.|.+|++...+...
T Consensus 259 la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~----- 331 (1045)
T 1k32_A 259 ILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----- 331 (1045)
T ss_dssp EEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-----
T ss_pred EEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-----
Confidence 8887 5899999998433221 23445567 8888888887 7899999988643211
Q ss_pred ecccCCCcc-ceeEEEECCCCCeEEEeecCCeEE-E-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEE
Q psy15191 129 VGEVGGNTL-GFYGCKFGPRGDYIIAHGFQGSLH-L-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYK 205 (312)
Q Consensus 129 ~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~i~-~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 205 (312)
+..+.. .+..++|+ +++.++.++.++.+. + +..+....... .|...+..++|+|||++|++++.++.|++||
T Consensus 332 ---~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 332 ---VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp ---CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ---ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 124445 78899999 999999988888888 7 66655544333 6778899999999999999999999999999
Q ss_pred ccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC----------eEEEEecCCCCCCcccccccccceeEE
Q psy15191 206 RQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG----------VCVVWGLGEPPTEEDLVQNTLWPEVQK 275 (312)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~ 275 (312)
+.+++....... |...+..++|+|||++|++++.++ .|++||+..+ ....
T Consensus 407 ~~tg~~~~~~~~-------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g-------------~~~~ 466 (1045)
T 1k32_A 407 LETGKPTVIERS-------REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR-------------KIFA 466 (1045)
T ss_dssp TTTCCEEEEEEC-------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT-------------EEEE
T ss_pred CCCCceEEeccC-------CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC-------------cEEE
Confidence 998877666544 666788999999999999887654 8999999876 4566
Q ss_pred eeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 276 LYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 276 ~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
+..|...+..++|+|||++|++++.++
T Consensus 467 l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred eeCCCcccCCceEcCCCCEEEEEeccc
Confidence 777888899999999999999987644
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=6e-22 Score=177.37 Aligned_cols=280 Identities=11% Similarity=0.076 Sum_probs=188.9
Q ss_pred ceEeCCCCeEEEEeccCCC---ceEEEEEeCCCCceEEEEccccCc------------------------EEEEEEecCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKS---KVMAVKWNGEGGKVLYTLTNHKSK------------------------VMAVKWVLNT 59 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~---~v~~~~w~~~~~~~~~~~~~h~~~------------------------v~~~~~~~~~ 59 (312)
.+.-..+|+.+.......+ ......|+.++++....+..+... |.+++|+|+
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD- 119 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD- 119 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT-
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC-
Confidence 3444566887776654232 233355999999888888765433 788999998
Q ss_pred CcCCCCceEEEecCCCcEEEeeecCC---ccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee
Q psy15191 60 SLDPEHKDLVSCSLDKTAILWKYVSE---GNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV 129 (312)
Q Consensus 60 ~~~~~~~~l~s~~~dg~i~vw~~~~~---~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 129 (312)
|++|++++. +.|++||+.++ ... .+....++|++..|+.++ ++.|++||+.+++...+.....
T Consensus 120 -----g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 120 -----AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp -----SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred -----CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 999998886 89999999887 432 234455688998888887 4689999998744221111000
Q ss_pred ccc-CC--------CccceeEEEECCCCCeEEEeecCC---------------------------------eEEE-eccc
Q psy15191 130 GEV-GG--------NTLGFYGCKFGPRGDYIIAHGFQG---------------------------------SLHL-DVTT 166 (312)
Q Consensus 130 ~~~-~~--------~~~~v~~~~~~~~~~~l~~~~~~~---------------------------------~i~~-d~~~ 166 (312)
... .+ ....+..++|+|||++|++++.++ .|.+ |+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 000 00 001247799999999999987765 5666 6666
Q ss_pred -Cceeeeec--ccCCceeEEEECCCCCEEEEEec-----CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 167 -WKQIQTLP--CHQLTITQLAFSPDDTHLVSVSR-----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 167 -~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
.+...... .|...+..++| |||++|++++. +..|++||+.+.+....+...... ....+..++|+|||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~---~~~~~~~~~~spdg 348 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT---WVPLHNSLRFLDDG 348 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS---CCCCCSCCEECTTS
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC---cCCcCCceEECCCC
Confidence 55443332 36788999999 99999997764 567999999988776655542110 00134578999999
Q ss_pred ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-EeccCCCeEEEEecCCCcccceEEeC
Q psy15191 239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-AASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+++++++.||.++||.+.... ....+..|...|..+ +|+|+|+.|+..+.+.. ...++||
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~------------~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~--~~~~~l~ 409 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKG------------KAAALTHGNWSVDELLAVDEKAGLAYFRAGIES--ARESQIY 409 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSS------------CEEESCCSSSCEEEEEEEETTTTEEEEEECSSC--TTCBEEE
T ss_pred eEEEEecCCCccEEEEEcCCC------------CeeeeeecceEEEeEeEEeCCCCEEEEEEeCCC--CceEEEE
Confidence 999999999988888775321 134556677778887 59999987765543210 1146666
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=7.6e-21 Score=155.21 Aligned_cols=255 Identities=12% Similarity=0.043 Sum_probs=182.5
Q ss_pred CCCCeEEEEeccCCC----ceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCC
Q psy15191 11 GEGGKVLYTLTNHKS----KVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSE 85 (312)
Q Consensus 11 ~~~~~~~~~~~~h~~----~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~ 85 (312)
..+++.++....... .-.-..|+..+++.+..+... ..+..++|+|+ ++ ++++...++.|.+||..++
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d------g~~l~v~~~~~~~v~~~d~~~~ 121 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNT------TQTLWFGNTVNSAVTAIDAKTG 121 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETT------TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCC------CCEEEEEecCCCEEEEEeCCCC
Confidence 345665655543210 112244899999988888753 45788999998 77 4556667899999999887
Q ss_pred cccc-----------------cccccCCCCCceEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC
Q psy15191 86 GNYL-----------------PYHMRDDSKQLHLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP 146 (312)
Q Consensus 86 ~~~~-----------------~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 146 (312)
+... +....+++++..+++++ .++.|.+||..+.+. ..... .+...+.+++|+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~-----~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 122 EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQ-----NTGKMSTGLALDS 194 (353)
T ss_dssp CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEEC-----CCCTTCCCCEEET
T ss_pred eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEec-----CCCCccceEEECC
Confidence 7521 12234566777666665 478899999987442 22221 2334477899999
Q ss_pred CCCeEEEeecCCeEEE-ecccCceeeeecc----cCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCC
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDK 220 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~ 220 (312)
+++.++++..++.+.+ |..+.+....+.. +...+..++|+|+++++++++. ++.|.+||..+.+....+...
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-- 272 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-- 272 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--
Confidence 9999999999999988 8888887766653 4556888999999998777665 499999999988877766642
Q ss_pred CCcccceeeEEEEEcCCCceEEE-eccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
. ...++|+|++++++. ...++.|.+||+.++. .+..+.. ...+.+++|+|+|++|+.+.
T Consensus 273 ----~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~------------~~~~~~~-~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 273 ----E---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK------------VVKTFDT-PTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp ----S---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE------------EEEEEEC-CSEEEEEEECTTSCEEEEEE
T ss_pred ----C---CceEEECCCCCEEEEEECCCCeEEEEECCCCe------------EEEEEec-CCCCCeEEEcCCCCEEEEEE
Confidence 1 146899999996554 4578999999988762 3444443 34678999999999777776
Q ss_pred cC
Q psy15191 300 KA 301 (312)
Q Consensus 300 ~d 301 (312)
.+
T Consensus 333 ~~ 334 (353)
T 3vgz_A 333 KQ 334 (353)
T ss_dssp EC
T ss_pred cc
Confidence 55
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=6.7e-23 Score=171.63 Aligned_cols=145 Identities=10% Similarity=0.084 Sum_probs=115.0
Q ss_pred CccceeEEEECCCCCeEE----EeecCCeEEE-ecccC-----ce------eeeecccCCceeEEEECCC-CCEEEEEec
Q psy15191 135 NTLGFYGCKFGPRGDYII----AHGFQGSLHL-DVTTW-----KQ------IQTLPCHQLTITQLAFSPD-DTHLVSVSR 197 (312)
Q Consensus 135 ~~~~v~~~~~~~~~~~l~----~~~~~~~i~~-d~~~~-----~~------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 197 (312)
+...|.+++|+|++++|+ +++.|+.|++ |+.+. +. ...+.+|...|.+++|+|+ +.+|++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 456799999999999999 7888999999 55443 11 2334468999999999997 889999999
Q ss_pred CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee
Q psy15191 198 DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY 277 (312)
Q Consensus 198 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 277 (312)
||.|++||+++......... |...|++++|+|+|++|++|+.||.|++||++ +. ....+.
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~-------~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~------------~~~~~~ 230 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLP-------STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ------------EKKVIP 230 (434)
T ss_dssp TSCEEEEEESSSEEEEEEEC-------GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC------------EEEEEC
T ss_pred CCeEEEEEcCCCcceeeccC-------CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc------------cccccc
Confidence 99999999998754433332 77889999999999999999999999999987 31 222222
Q ss_pred c-------cCcceeEEEeccCCCeEEEEe
Q psy15191 278 G-------HGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 278 ~-------~~~~v~~~~~s~~~~~l~s~s 299 (312)
. |...|.+++|++++.++++.+
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred CCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 2 344899999999988886544
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.9e-22 Score=168.83 Aligned_cols=205 Identities=13% Similarity=0.077 Sum_probs=150.6
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----------------------cccccccCCCCCceEE
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----------------------YLPYHMRDDSKQLHLL 103 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----------------------~~~~~~~~~~~~~~l~ 103 (312)
...++.++++++ +.++++++.|+ +++|+...... ..+..+.+++++.+|+
T Consensus 36 ~~~~n~lavs~~------~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~la 108 (434)
T 2oit_A 36 KERSSLLAVSNK------YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLS 108 (434)
T ss_dssp CSCCBCEEEETT------TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEE
T ss_pred CCCccEEEEecC------CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEE
Confidence 346889999998 88999999888 89987532100 1255567788888998
Q ss_pred ----EEeCCCcEEEEcCCCCcc---ee-eeeeeecccCCCccceeEEEECCC-CCeEEEeecCCeEEE-ecccCceeeee
Q psy15191 104 ----SCSMDKSIIVWAPDPTTG---LW-LETARVGEVGGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL-DVTTWKQIQTL 173 (312)
Q Consensus 104 ----~~~~d~~i~i~d~~~~~~---~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~-d~~~~~~~~~~ 173 (312)
+++.|+.|++||+.+... .. ........+.+|...|.+++|+|+ +.+|++++.||.|++ |+++.......
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 788999999999865300 00 000112234568899999999998 889999999999999 66666554455
Q ss_pred cccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCC----
Q psy15191 174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDG---- 248 (312)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg---- 248 (312)
.+|...|.+++|+|+|++|++|+.||.|++||++ .+....+.........|...|.+++|++++.++++. +.||
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 5788999999999999999999999999999998 555544443322211245689999999998887653 3443
Q ss_pred --eEEEEecCCCC
Q psy15191 249 --VCVVWGLGEPP 259 (312)
Q Consensus 249 --~i~iwd~~~~~ 259 (312)
.+++|++....
T Consensus 268 ~~~v~i~~l~~~~ 280 (434)
T 2oit_A 268 SPDVVMALLPKKE 280 (434)
T ss_dssp CCEEEEEECCCTT
T ss_pred CCceEEEEeccCC
Confidence 49999998653
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=4e-22 Score=178.51 Aligned_cols=230 Identities=14% Similarity=0.062 Sum_probs=167.7
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecC-CC-----cEEEeeecCCcccc-------------------------------
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSL-DK-----TAILWKYVSEGNYL------------------------------- 89 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg-----~i~vw~~~~~~~~~------------------------------- 89 (312)
...|.+++|+|+ |++|++++. |+ .|++||+.+++...
T Consensus 36 ~~~~~~~~~Spd------G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPD------GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCCEEEEECTT------SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCE
T ss_pred CCCCCCceEecC------CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhcccc
Confidence 457999999999 999999998 88 89999998876421
Q ss_pred -cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccC
Q psy15191 90 -PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTW 167 (312)
Q Consensus 90 -~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~ 167 (312)
+....+++++.+|++++. +.|++||+.++.... ...+..+...+..++|+|||++|+.++. +.|++ |+.+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~-----~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g 182 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA-----VRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG 182 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS-----CCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce-----EEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC
Confidence 345567899999998887 999999998751000 1122345677999999999999998874 57777 77766
Q ss_pred ceeeeecccCCc----------------eeEEEECCCCCEEEEEecCC--------------------------------
Q psy15191 168 KQIQTLPCHQLT----------------ITQLAFSPDDTHLVSVSRDR-------------------------------- 199 (312)
Q Consensus 168 ~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~d~-------------------------------- 199 (312)
+.......+... +..++|+|||++|++++.|+
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 555443333322 47899999999999988775
Q ss_pred -eEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-----CCeEEEEecCCCCCCcccccccccce
Q psy15191 200 -RWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-----DGVCVVWGLGEPPTEEDLVQNTLWPE 272 (312)
Q Consensus 200 -~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~ 272 (312)
.|++||+.+ .+....... ..+...+..++| |||++|+.++. +..|++||+.++. .
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~------------~ 324 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLG-----KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ------------Q 324 (741)
T ss_dssp EEEEEECSSTTCCCEEECCC-----SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC------------E
T ss_pred eEEEEEECCCCCceEEecCC-----CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc------------e
Confidence 788999887 665433221 016678999999 99999987654 5689999998763 2
Q ss_pred eEEeeccCc----ceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 273 VQKLYGHGY----EIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 273 ~~~~~~~~~----~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...+..+.. .+.+++|+|||+++++++.|+ .++||
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~ 363 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG-----FQHLY 363 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS-----SCEEE
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC-----ccEEE
Confidence 333333332 456899999999888885544 36665
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=9.2e-21 Score=153.60 Aligned_cols=238 Identities=9% Similarity=0.035 Sum_probs=169.1
Q ss_pred EeCCCCceEEEEccccC--cEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCccc-------------ccccccC
Q psy15191 32 WNGEGGKVLYTLTNHKS--KVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNY-------------LPYHMRD 95 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~ 95 (312)
|+..+++.+..+..... .+..++|+|+ ++.+ ++++.++.|.+||+.+++.. .+....+
T Consensus 16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAGPTPMVPMVAPG------GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL 89 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECTT------SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE
T ss_pred EECCCCcEEEEEEcCCCCCCccceEEcCC------CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE
Confidence 88989998888864322 5889999998 7654 66677899999999887653 2223445
Q ss_pred CCCCceEEEEe------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-
Q psy15191 96 DSKQLHLLSCS------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL- 162 (312)
Q Consensus 96 ~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~- 162 (312)
++++.+++++. .++.|.+||+.+.+. ..... ....+.+++|+|++++++++ ++.+.+
T Consensus 90 s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--~~~~~------~~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFE------APRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEE------CCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred CCCCCEEEEEecccccccccccccCceEEEEECCCCcE--EEEEe------CCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 77887888876 579999999987432 22222 12346788999999988887 577877
Q ss_pred ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC------------------------eEEEEEccCCCeEEEEecc
Q psy15191 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR------------------------RWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------~i~~wd~~~~~~~~~~~~~ 218 (312)
|+.+.+....+..+.. ...+.|+|++..++..+..+ .|.+||+.+.+.. .....
T Consensus 160 d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~ 237 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR 237 (337)
T ss_dssp ETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE
T ss_pred ECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC
Confidence 8888877766653321 11337899988776554332 4689999887664 22221
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
. +...+.+++|+|++++|+++ ++.|++||+.++. .+..+. ....+.+++|+|+|++|+++
T Consensus 238 ~-----~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~------------~~~~~~-~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 238 I-----MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA------------SIKRVP-LPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp E-----CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE------------EEEEEE-CSSCCCEEEECTTSCEEEEE
T ss_pred C-----CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc------------Ccceec-CCCceeeEEECCCCCEEEEE
Confidence 1 44567789999999999888 7899999987752 334443 33567899999999999998
Q ss_pred ecCCCcccceEEeC
Q psy15191 299 CKATKPEHAAIIIW 312 (312)
Q Consensus 299 s~d~~~~dg~i~iW 312 (312)
+. ++.|++|
T Consensus 298 ~~-----~~~i~v~ 306 (337)
T 1pby_B 298 GA-----LGDLAAY 306 (337)
T ss_dssp SB-----SSEEEEE
T ss_pred cC-----CCcEEEE
Confidence 44 4558887
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=6e-21 Score=170.03 Aligned_cols=249 Identities=10% Similarity=0.064 Sum_probs=167.1
Q ss_pred EEeCCCCceE-EEEcccc-----------------CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc----
Q psy15191 31 KWNGEGGKVL-YTLTNHK-----------------SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---- 88 (312)
Q Consensus 31 ~w~~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---- 88 (312)
.||..+++.+ ..+..|. ..|.+++|+|+ +.++++. ++.|++||+.+++..
T Consensus 47 ~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd------~~~~~~~--~~~i~~~d~~~~~~~~l~~ 118 (706)
T 2z3z_A 47 VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR------GLVVLFT--QGGLVGFDMLARKVTYLFD 118 (706)
T ss_dssp EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT------TEEEEEE--TTEEEEEETTTTEEEEEEC
T ss_pred EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC------CeEEEEE--CCEEEEEECCCCceEEccC
Confidence 5999998874 4444443 56999999988 6555553 599999999887652
Q ss_pred ---ccccccCCCCCceEEEEeCCCcEEEEcCCC-----Ccceeeeeeeecc-------cCCCccceeEEEECCCCCeEEE
Q psy15191 89 ---LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP-----TTGLWLETARVGE-------VGGNTLGFYGCKFGPRGDYIIA 153 (312)
Q Consensus 89 ---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~ 153 (312)
.+....++|++..++++ .++.|++||+.+ ++...+....... ...+...+.+++|+|||++|++
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 23445568899888884 789999999987 5432211110000 0001122578999999999998
Q ss_pred ee---------------------------------cCCeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEEec
Q psy15191 154 HG---------------------------------FQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSVSR 197 (312)
Q Consensus 154 ~~---------------------------------~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 197 (312)
++ .+..+.+ |+.+.+...... .|...+..++|+|||++|++++.
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 87 3355666 777666544332 46678999999999999999887
Q ss_pred CC-----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC--CCceEEEeccCCeEEEEecCCCCCCccccccccc
Q psy15191 198 DR-----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH--DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW 270 (312)
Q Consensus 198 d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 270 (312)
++ .|++||+.+++....+....... ....+..++|+| +|+++++++.|+.++||++.....
T Consensus 278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~--~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---------- 345 (706)
T 2z3z_A 278 NRAQNECKVNAYDAETGRFVRTLFVETDKH--YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---------- 345 (706)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEECSS--CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC----------
T ss_pred CCCCCeeEEEEEECCCCceeeEEEEccCCC--eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC----------
Confidence 76 89999999874443333211100 111245789999 999999999999999998763211
Q ss_pred ceeEEeeccCcceeE-EEeccCCCeEEEEecC
Q psy15191 271 PEVQKLYGHGYEIYS-LAASHDGTLLASACKA 301 (312)
Q Consensus 271 ~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d 301 (312)
.+..+..|...+.. ++|+|+|+.|+.++.+
T Consensus 346 -~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 346 -LIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp -EEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred -EEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 45666777777877 7999999988776543
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.8e-20 Score=152.94 Aligned_cols=238 Identities=8% Similarity=0.001 Sum_probs=169.5
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecC-------CCcEEEeeecCCcccc-------cccccCCCCCceE-EEEeCCCc
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSL-------DKTAILWKYVSEGNYL-------PYHMRDDSKQLHL-LSCSMDKS 110 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~-------dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l-~~~~~d~~ 110 (312)
....+..++|+|+ ++++++++. ++.|.+||..+++... +....+++++..+ ++...++.
T Consensus 39 ~~~~~~~~~~s~d------g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 39 VGKGAYEMAYSQQ------ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp EESSEEEEEEETT------TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTE
T ss_pred hccCccceEECCC------CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCE
Confidence 3467889999999 888777763 5689999998876532 2233345666644 55566799
Q ss_pred EEEEcCCCCcceeeeeeeecccC----CCccceeEEEECCCCCeEEEee--cCCeEEE-ecccCceeeeecccCCceeEE
Q psy15191 111 IIVWAPDPTTGLWLETARVGEVG----GNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTWKQIQTLPCHQLTITQL 183 (312)
Q Consensus 111 i~i~d~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~~~~~v~~~ 183 (312)
|.+||..+.+.. ......... .....+.+++|+|++++++++. .++.|.+ |..+.+....+..+...+..+
T Consensus 113 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 113 VTAIDAKTGEVK--GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEEETTTCCEE--EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred EEEEeCCCCeeE--EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceE
Confidence 999999885432 222211100 0112368899999999888776 4777888 988888887776566668899
Q ss_pred EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCCCc
Q psy15191 184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPTEE 262 (312)
Q Consensus 184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~ 262 (312)
+|+|+++++++++.++.|.+||..+.+....+...... +...+..++|+|++++++.++. ++.|.+||+.++.
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--- 264 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDG---KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--- 264 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS---SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC---
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC---CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc---
Confidence 99999999999999999999999988777666542211 3445788999999997766654 5899999997763
Q ss_pred ccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+.... ...++|+|+|++++.++ ..++.|.+|
T Consensus 265 ---------~~~~~~~~~--~~~~~~s~dg~~l~v~~----~~~~~v~~~ 299 (353)
T 3vgz_A 265 ---------ILAKVAAPE--SLAVLFNPARNEAYVTH----RQAGKVSVI 299 (353)
T ss_dssp ---------EEEEEECSS--CCCEEEETTTTEEEEEE----TTTTEEEEE
T ss_pred ---------EEEEEEcCC--CceEEECCCCCEEEEEE----CCCCeEEEE
Confidence 334443322 25799999999666554 345558876
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=3.8e-20 Score=149.80 Aligned_cols=240 Identities=8% Similarity=0.015 Sum_probs=155.9
Q ss_pred eEeCCCCeEEEEeccCCCceEEEEE--------------------eCCCCce-EEEEccccCcEEEEEEecCcCcCCCCc
Q psy15191 8 VVNGEGGKVLYTLTNHKSKVMAVKW--------------------NGEGGKV-LYTLTNHKSKVMAVKWVLNTSLDPEHK 66 (312)
Q Consensus 8 v~~~~~~~~~~~~~~h~~~v~~~~w--------------------~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~ 66 (312)
+|+..+++.+..+..+...+ .++| +..+++. ...+..+..+..+++|+|+ ++
T Consensus 24 ~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d------g~ 96 (331)
T 3u4y_A 24 FFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD------DQ 96 (331)
T ss_dssp EEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT------SS
T ss_pred EEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC------CC
Confidence 56666666666555444444 5554 4444555 5555555555555888888 89
Q ss_pred eEEEecCCC---cEEEeeecCCcccc-------cccccCCCCCceEEEE-eCCCc-EEEEcCCCCcceeeeeeeecccCC
Q psy15191 67 DLVSCSLDK---TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSC-SMDKS-IIVWAPDPTTGLWLETARVGEVGG 134 (312)
Q Consensus 67 ~l~s~~~dg---~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~ 134 (312)
+|+++..++ .|.+||+.+++... .....+++++.+++++ ..++. |.+|++.......... .... .
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~--~~~~-~ 173 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG--QEFI-S 173 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE--EEEE-C
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC--Cccc-c
Confidence 888665553 89999998876532 2334557787755554 55588 9999988533221111 1111 2
Q ss_pred CccceeEEEECCCCCeEEEee-cCCeEEE-ecccCce---eeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccC
Q psy15191 135 NTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQ---IQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQS 208 (312)
Q Consensus 135 ~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~ 208 (312)
....+..++|+|+++++++++ .++.+.+ |+.+.+. ...+. ....+..++|+|||+++++++ .++.|.+||+.+
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 334578999999999765554 6788988 8888877 65555 446778999999999776654 578899999987
Q ss_pred CCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCC
Q psy15191 209 SGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEP 258 (312)
Q Consensus 209 ~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~ 258 (312)
.+. +..+................++|+|++++|+.+ ..++.|.+||+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 253 GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 665 222222100101111223568999999988655 45679999999775
No 148
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=1.6e-19 Score=148.13 Aligned_cols=266 Identities=12% Similarity=0.053 Sum_probs=171.4
Q ss_pred CceEEEEEeCCCCceEEE--Ec-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec-CCcccc---------cc
Q psy15191 25 SKVMAVKWNGEGGKVLYT--LT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV-SEGNYL---------PY 91 (312)
Q Consensus 25 ~~v~~~~w~~~~~~~~~~--~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~-~~~~~~---------~~ 91 (312)
+.|..+.++++++++... .. +....+..++|+|+ +++|++++.+ .|.+|++. +++... ..
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spd------g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~ 86 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE------RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR 86 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT------SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCC------CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc
Confidence 468888888888865332 21 23346888999999 8999988887 99999997 554321 22
Q ss_pred cccCCCCCce--EEEEe-------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec
Q psy15191 92 HMRDDSKQLH--LLSCS-------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF 156 (312)
Q Consensus 92 ~~~~~~~~~~--l~~~~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 156 (312)
...+++++.+ ++++. .++.+.+|++... +.......... ..+...+.+++|+|+|++++++..
T Consensus 87 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 87 ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYE-YQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEET
T ss_pred cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC-CcCcceEeeEE-eCCCCcceEEEECCCCCEEEEEcC
Confidence 3455778874 44553 6899999998742 11111111110 123456889999999998887654
Q ss_pred -CCeEEE-ecc-cCceee--eec--ccCCceeEEEECCCCCEEEEEec-CCeEEEEEccC--CCeE---EEEeccCCCCc
Q psy15191 157 -QGSLHL-DVT-TWKQIQ--TLP--CHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQS--SGRL---SLVACSDKTNG 223 (312)
Q Consensus 157 -~~~i~~-d~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~--~~~~---~~~~~~~~~~~ 223 (312)
++.|.+ ++. +.++.. .+. .+...+..++|+|||+++++++. ++.|.+|++.. ++.. ..+........
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 578888 665 454432 222 23567899999999999888775 68999998763 3322 11221111000
Q ss_pred ccce------eeEEEE-EcCCCceEEEeccC-C-----eEEEEecCCCCCCcccccccccceeE-EeeccCcceeEEEec
Q psy15191 224 VHKR------IIWGVA-WSHDSRYFLTISRD-G-----VCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYGHGYEIYSLAAS 289 (312)
Q Consensus 224 ~~~~------~v~~~~-~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s 289 (312)
.+.. .+..++ |+|||++|++++.+ + .|.+|++...... ..+. ....+...+..++|+
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~---------~~~~~~~~~~~~~~~~~a~s 315 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI---------EKQLFLSPTPTSGGHSNAVS 315 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE---------EEEEEEEECSSCCTTCCCEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE---------EEeeeeeecCCCCcccceec
Confidence 1222 578999 99999988876643 2 8999999632110 0111 133355567889999
Q ss_pred c---CCCeEEEEecCCCcccceEEeC
Q psy15191 290 H---DGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 290 ~---~~~~l~s~s~d~~~~dg~i~iW 312 (312)
| +|++|++++.+ ++.|.+|
T Consensus 316 p~~~dg~~l~v~~~~----~~~v~v~ 337 (365)
T 1jof_A 316 PCPWSDEWMAITDDQ----EGWLEIY 337 (365)
T ss_dssp ECTTCTTEEEEECSS----SCEEEEE
T ss_pred CCCcCCCEEEEEEcC----CCeEEEE
Confidence 9 89999999632 3558876
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3.7e-20 Score=150.43 Aligned_cols=227 Identities=10% Similarity=0.116 Sum_probs=147.7
Q ss_pred ceEEEecCCCcEEEeeecC-Ccc---------cccccccCCCCCceEEEEeCC-CcEEEEcCC--CCcceeeeeeeeccc
Q psy15191 66 KDLVSCSLDKTAILWKYVS-EGN---------YLPYHMRDDSKQLHLLSCSMD-KSIIVWAPD--PTTGLWLETARVGEV 132 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~-~~~---------~~~~~~~~~~~~~~l~~~~~d-~~i~i~d~~--~~~~~~~~~~~~~~~ 132 (312)
.++++++.|+.|++|++.. +.. ..+..+.+++++.++++++.+ +.|.+|++. +++...+....
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---- 81 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA---- 81 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE----
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc----
Confidence 3455558899999999963 221 133445567888888888876 899999998 33322222222
Q ss_pred CCCccceeEEEECCCCCeEEEeec-CCeEEE-ec---ccCceeeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEc
Q psy15191 133 GGNTLGFYGCKFGPRGDYIIAHGF-QGSLHL-DV---TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKR 206 (312)
Q Consensus 133 ~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~ 206 (312)
.+. .+..++|+|+++++++++. ++.+.+ |+ .+.+....+. ....+.+++|+|+++++++++ .++.|++||+
T Consensus 82 -~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 82 -LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp -CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred -cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 222 6788999999998877665 788888 55 3333333333 334688999999999888877 8999999999
Q ss_pred cCCCeEEEEe---ccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeecc---
Q psy15191 207 QSSGRLSLVA---CSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH--- 279 (312)
Q Consensus 207 ~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--- 279 (312)
.+...+.... .... ....+..++|+|++++|+.+ ..++.|.+|++......... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-----~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTV----EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-----VQTLDMMPENFSD 229 (343)
T ss_dssp CTTSCEEEEEEEEEECS----TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-----EEEEECSCTTCCS
T ss_pred cCCCceeeecccccccC----CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-----EeeccccCccccc
Confidence 8733332211 1100 33457789999999977554 58899999999642211000 0011111111
Q ss_pred CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 280 GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 280 ~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
...+.+++|+|+|++|+.+. ..++.|++|
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~----~~~~~i~v~ 258 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACD----RTASLITVF 258 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEE----TTTTEEEEE
T ss_pred cCCccceEECCCCCEEEEEe----cCCCEEEEE
Confidence 23567899999998887553 345568887
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=8.1e-22 Score=176.07 Aligned_cols=224 Identities=11% Similarity=0.031 Sum_probs=158.2
Q ss_pred cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCC---------
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMD--------- 108 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d--------- 108 (312)
.+.+++|+|+ |+++++ +.||+|++||+.+++.. .+....++|++.+|++++.+
T Consensus 18 ~~~~~~~spd------g~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 18 HDPEAKWISD------TEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCBSSS------SCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred cccccEEcCC------CcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 4667788888 887766 78999999999887652 14456678999999998775
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc--------
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT-------- 179 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~-------- 179 (312)
+.+.+||+.+++... +.....+...+..++|+|||+.|+.++. +.|++ |..+.+.......+...
T Consensus 91 ~~i~~~d~~~~~~~~-----l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQS-----LDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp SEEEEEESSSCCCEE-----CCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred eeEEEEECCCCceEe-----ccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence 778899998855311 1122344555888999999999998876 67887 66666555444433332
Q ss_pred ----------eeEEEECCCCCEEEEEecCC----------------------------------eEEEEEccCCCeEEEE
Q psy15191 180 ----------ITQLAFSPDDTHLVSVSRDR----------------------------------RWGLYKRQSSGRLSLV 215 (312)
Q Consensus 180 ----------v~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~ 215 (312)
+..++|+|||++|++++.|+ .|++||+.+.+....+
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 37899999999999987653 7899999877654444
Q ss_pred eccCCCCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEeec-cCcce----eEE
Q psy15191 216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEI----YSL 286 (312)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v----~~~ 286 (312)
..... ...+...+..++|+|||++|++.+. +..|++||+.++. ....+.. +...+ ..+
T Consensus 245 ~~~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~------------~~~~~~~~~~~~~~~~~~~~ 311 (723)
T 1xfd_A 245 MPPDD-PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------------CTKKHEDESEAWLHRQNEEP 311 (723)
T ss_dssp CCCCC-GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------------EEEEEEEECSSCCCCCCCCC
T ss_pred eCCcc-CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc------------ceEEEEeccCCEEeccCCCc
Confidence 32111 1113667899999999999877653 3579999998763 2233322 33444 378
Q ss_pred EeccCCCeEEEE
Q psy15191 287 AASHDGTLLASA 298 (312)
Q Consensus 287 ~~s~~~~~l~s~ 298 (312)
+|+|||+.|+..
T Consensus 312 ~~spdg~~l~~~ 323 (723)
T 1xfd_A 312 VFSKDGRKFFFI 323 (723)
T ss_dssp EECTTSCSEEEE
T ss_pred eEcCCCCeEEEE
Confidence 999999988865
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=8.4e-21 Score=150.82 Aligned_cols=206 Identities=16% Similarity=0.146 Sum_probs=147.6
Q ss_pred EecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCC-CcceeeeeeeecccCCCccceeE
Q psy15191 70 SCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDP-TTGLWLETARVGEVGGNTLGFYG 141 (312)
Q Consensus 70 s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~~ 141 (312)
+++.|+.|++||+.+++.. .+....+++++.++++++ ++.|++||+.+ .+...+.. ..+...+.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT------GFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC------TTCCCBCSC
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc------ccccccccc
Confidence 4567899999999887652 344556688888888876 78999999987 54322111 122466888
Q ss_pred EEECCCCCeEEEeec--CC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEE-EEecCCeEEEEEccCC-CeEEE
Q psy15191 142 CKFGPRGDYIIAHGF--QG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSS-GRLSL 214 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~--~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~-~~~~~ 214 (312)
++|+|+++++++++. ++ .+.. +..+... ..+. +...+..++|+|++++|+ +++.++.+++|++... .....
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 999999999999883 33 3444 5554442 2333 333588999999999887 7788999999997532 22222
Q ss_pred EeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293 (312)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 293 (312)
+.. +...+.+++|+|++++|+.++ .++.+++|++..... .+..+..|...+..++|+|+|+
T Consensus 168 ~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~s~dg~ 229 (297)
T 2ojh_A 168 LTH-------GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----------SVERITDSAYGDWFPHPSPSGD 229 (297)
T ss_dssp CCC-------SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----------CEEECCCCSEEEEEEEECTTSS
T ss_pred ccc-------CCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----------CcEEEecCCcccCCeEECCCCC
Confidence 222 566789999999999887665 588999998863321 4566777888899999999999
Q ss_pred eEEEEecCC
Q psy15191 294 LLASACKAT 302 (312)
Q Consensus 294 ~l~s~s~d~ 302 (312)
+|++++.++
T Consensus 230 ~l~~~~~~~ 238 (297)
T 2ojh_A 230 KVVFVSYDA 238 (297)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEcCC
Confidence 999987653
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=6.3e-21 Score=166.14 Aligned_cols=222 Identities=7% Similarity=-0.072 Sum_probs=154.8
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecC-CCcEEEeeecCCccc--------ccccccCCCCCceEEEEeC---CCcEEEE
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSM---DKSIIVW 114 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~---d~~i~i~ 114 (312)
..+|++++|+|+ |+.||+++. ||+++||++..++.. .+....++|+ ..+++++. +....+|
T Consensus 21 ~~~~~~~~~~~D------G~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVD------GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEET------TTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCC------CCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 568999999999 999999887 999999999766542 2233345666 56666664 4555665
Q ss_pred cCCC--CcceeeeeeeecccCCCccceeEEEECCCCCe--EEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCC
Q psy15191 115 APDP--TTGLWLETARVGEVGGNTLGFYGCKFGPRGDY--IIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDT 190 (312)
Q Consensus 115 d~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (312)
.+.. ..... .... ...+...+|+|+++. ++++..++...+|+.+.+...... +.. .+++|+|||+
T Consensus 94 ~~~~~~~g~~~----~l~~----~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~ 162 (582)
T 3o4h_A 94 KVNTSRPGEEQ----RLEA----VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGD 162 (582)
T ss_dssp EEETTSTTCCE----ECTT----SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETT
T ss_pred EEeccCCCccc----cccC----CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCC
Confidence 5433 21111 1111 112335678887764 444445555533777666554443 333 8899999999
Q ss_pred EEEEEecC----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--eEEEEecCCCCCCccc
Q psy15191 191 HLVSVSRD----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--VCVVWGLGEPPTEEDL 264 (312)
Q Consensus 191 ~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~ 264 (312)
+|++++.+ +.|++||+.+++... +.. +...+..++|+|||++|+++..++ .|++||+.++.
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~-------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~----- 229 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLRV-FDS-------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS----- 229 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCEE-ECC-------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC-----
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCceE-eec-------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc-----
Confidence 99988877 789999998776543 332 667789999999999999888888 89999998763
Q ss_pred ccccccceeEEeeccCcceeEEE--------eccCCCeEEEEecCCCcccceEEeC
Q psy15191 265 VQNTLWPEVQKLYGHGYEIYSLA--------ASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.. .+.+|...+..++ |+|||.++++++.| |.+++|
T Consensus 230 -------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-----g~~~l~ 272 (582)
T 3o4h_A 230 -------VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE-----GRSAVF 272 (582)
T ss_dssp -------EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET-----TEEEEE
T ss_pred -------EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC-----CcEEEE
Confidence 23 5667777777777 99999888888554 448887
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=8.1e-20 Score=148.82 Aligned_cols=225 Identities=11% Similarity=0.056 Sum_probs=152.7
Q ss_pred CCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceE-EEEeCCCcEEEEcCCCCcceeeeeeeecc
Q psy15191 62 DPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHL-LSCSMDKSIIVWAPDPTTGLWLETARVGE 131 (312)
Q Consensus 62 ~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 131 (312)
++++.++++++.+++|.+||..+++.. .+....+++++..+ ++...++.|.+||+.+.+.. .......
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~--~~~~~~~ 85 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT--FHANLSS 85 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEESCC
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE--EEEEccc
Confidence 344889999999999999999887652 12333446777655 45567899999999875432 2222110
Q ss_pred cC-CCccceeEEEECCCCCeEEEeecC------------CeEEE-ecccCceee---eecccCCceeEEEECCCCCEEEE
Q psy15191 132 VG-GNTLGFYGCKFGPRGDYIIAHGFQ------------GSLHL-DVTTWKQIQ---TLPCHQLTITQLAFSPDDTHLVS 194 (312)
Q Consensus 132 ~~-~~~~~v~~~~~~~~~~~l~~~~~~------------~~i~~-d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~ 194 (312)
.. .....+..++|+|+++++++++.+ +.+.+ |+.+.+... ... +...+.+++|+|+|+ +++
T Consensus 86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE
T ss_pred ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE
Confidence 00 002346789999999999998865 88888 777644332 232 445688999999999 555
Q ss_pred EecCCeEEEEEccCCCeEEEEeccCCCCc---------------------------------------------------
Q psy15191 195 VSRDRRWGLYKRQSSGRLSLVACSDKTNG--------------------------------------------------- 223 (312)
Q Consensus 195 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--------------------------------------------------- 223 (312)
++. .|++||+.+.+....+........
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 543 499999988877665543210000
Q ss_pred ----------ccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCC
Q psy15191 224 ----------VHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG 292 (312)
Q Consensus 224 ----------~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 292 (312)
.+...+..++|+| ++++++++ ++.|.+||+.++. .+..+. ....+.+++|+|+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~------------~~~~~~-~~~~~~~~~~s~dg 306 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK------------LIKAAN-LDHTYYCVAFDKKG 306 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE------------EEEEEE-CSSCCCEEEECSSS
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe------------EEEEEc-CCCCccceEECCCC
Confidence 0011355778889 99999888 8899999998762 333443 33457899999999
Q ss_pred CeEEEEecCCCcccceEEeC
Q psy15191 293 TLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 293 ~~l~s~s~d~~~~dg~i~iW 312 (312)
++|++++ .++.|++|
T Consensus 307 ~~l~~~~-----~~~~v~v~ 321 (349)
T 1jmx_B 307 DKLYLGG-----TFNDLAVF 321 (349)
T ss_dssp SCEEEES-----BSSEEEEE
T ss_pred CEEEEec-----CCCeEEEE
Confidence 9999884 44559887
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=3.7e-20 Score=171.42 Aligned_cols=241 Identities=11% Similarity=0.109 Sum_probs=175.7
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC--ccc------ccccccCCCCCceEEEEeCCC
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--GNY------LPYHMRDDSKQLHLLSCSMDK 109 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~--~~~------~~~~~~~~~~~~~l~~~~~d~ 109 (312)
.....+.+|...+.++.|+++ .++++++.|+.++||.+... ... ......+++++..++.+ .++
T Consensus 194 ~~~~~l~~~~~~v~~~~~s~d-------~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~-~~~ 265 (1045)
T 1k32_A 194 GAFKKIVDMSTHVSSPVIVGH-------RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFS-KGG 265 (1045)
T ss_dssp TEEEEEECCSSCCEEEEEETT-------EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEE-ETT
T ss_pred CCeEECcCCCCcccceEEeCC-------EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEE-eCC
Confidence 344556889999999999876 57778888999999987642 211 11223456777778777 589
Q ss_pred cEEEEcCCCCcceeeeeeeec------ccCCCccceeEEEEC-CCCCeEEEeecCCeEEE-ecccCceeeeecccCC-ce
Q psy15191 110 SIIVWAPDPTTGLWLETARVG------EVGGNTLGFYGCKFG-PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQL-TI 180 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~-~v 180 (312)
.|.+|++.... +...... ....+...+.+++|+ |+|+.+++++ ++.+.+ +..+..... +..|.. .+
T Consensus 266 ~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~ 340 (1045)
T 1k32_A 266 SIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRY 340 (1045)
T ss_dssp EEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEE
T ss_pred EEEEecCCceE---eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceE
Confidence 99999984322 1111100 000133468899999 9999999887 677777 655554433 445666 89
Q ss_pred eEEEECCCCCEEEEEecCCeEE-EEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 181 TQLAFSPDDTHLVSVSRDRRWG-LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 181 ~~~~~~~~~~~l~~~~~d~~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
..++|+ ||+.|++++.++.+. +||+......... . +...+..++|+|+|++|++++.++.|++||+.++.
T Consensus 341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~-------~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-E-------NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp EEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-C-------CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-C-------CccceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence 999999 999999999888888 9998866543322 2 66678999999999999999999999999998763
Q ss_pred CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC-----CcccceEEeC
Q psy15191 260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT-----KPEHAAIIIW 312 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~-----~~~dg~i~iW 312 (312)
....+.+|...+.+++|||||++|++++.++ ...++.|++|
T Consensus 412 ------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 412 ------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp ------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred ------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 3444557889999999999999999987643 1134578887
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=2.6e-20 Score=166.29 Aligned_cols=266 Identities=11% Similarity=0.032 Sum_probs=169.6
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccC---cEEEEEEecCcCcCCCCceEEEecC---------C
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKS---KVMAVKWVLNTSLDPEHKDLVSCSL---------D 74 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~l~s~~~---------d 74 (312)
.-|.+ +|+.+..- ..+.| ..|+..+++....+.+|.. .+.+++|+|+ |++|++++. |
T Consensus 21 ~~~s~-dg~~~~~~--~d~~i--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpD------g~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 21 PNWIS-GQEYLHQS--ADNNI--VLYNIETGQSYTILSNRTMKSVNASNYGLSPD------RQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CEESS-SSEEEEEC--TTSCE--EEEESSSCCEEEEECHHHHHTTTCSEEEECTT------SSEEEEEEEEEECSSSCEE
T ss_pred cEECC-CCeEEEEc--CCCCE--EEEEcCCCcEEEEEccccccccceeeEEECCC------CCeEEEEecCceeEEeecc
Confidence 34544 45655443 23343 3499999998888877654 4899999999 999998876 7
Q ss_pred CcEEEeeecCCcc---c----ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec--ccCCCc---------
Q psy15191 75 KTAILWKYVSEGN---Y----LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG--EVGGNT--------- 136 (312)
Q Consensus 75 g~i~vw~~~~~~~---~----~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~--------- 136 (312)
+.|++||+.+++. . .+....++|++..|+.+. ++.|++|++.+++...+...... .+.++.
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp EEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred eEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence 8999999988776 2 234456789999988885 78999999987543221110000 000111
Q ss_pred cceeEEEECCCCCeEEEeecCC----------------------------------eEEE-ecccCcee--------eee
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQG----------------------------------SLHL-DVTTWKQI--------QTL 173 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~----------------------------------~i~~-d~~~~~~~--------~~~ 173 (312)
....+++|+|||+.|+.++.+. .+++ |+.+.+.. ..+
T Consensus 169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence 1124799999999999887652 5556 66555432 112
Q ss_pred cccCCceeEEEECCCCCEEEEEecC----CeEEEEE----ccCCCeEEEEeccCCCCcccceeeE-----EEEEcCCCce
Q psy15191 174 PCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYK----RQSSGRLSLVACSDKTNGVHKRIIW-----GVAWSHDSRY 240 (312)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~ 240 (312)
.+|...+..++|+||++++++.... ..|.+|| +.+++....+... ...+...+. .++|+|||+.
T Consensus 249 ~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI---EESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE---EECSSSCSSSSSCCCCEECTTSSC
T ss_pred CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc---cccCCceEccccCCccEECCCCCe
Confidence 3577889999999998777764432 2488888 6554332222100 001344444 6899999996
Q ss_pred EEE--eccCC--eEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191 241 FLT--ISRDG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 241 l~s--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d 301 (312)
|+. +..+| .|++||+..+ ....+..+...+..+.++ +++.|+..+.+
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~-------------~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVE-------------NAIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCST-------------TCEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred EEEEEEccCCceEEEEEECCCC-------------ceEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 654 44555 5666776554 233444555667777777 88777776543
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=8.1e-20 Score=151.15 Aligned_cols=258 Identities=9% Similarity=-0.040 Sum_probs=161.3
Q ss_pred CCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc
Q psy15191 13 GGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH 92 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 92 (312)
+|+.+.......+...-..|+.++++......++...+..+.|+|+ ++.|+.++.++.|++||+.+++...+..
T Consensus 46 Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spd------g~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 46 DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPD------DDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCC------CCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 3444444433233322233566666666555556555556778888 9999999999999999999887532211
Q ss_pred c----------cCCCCCceEEEE----------------------eCCCcEEEEcCCCCcceeeeeeeecccCCCcccee
Q psy15191 93 M----------RDDSKQLHLLSC----------------------SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY 140 (312)
Q Consensus 93 ~----------~~~~~~~~l~~~----------------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~ 140 (312)
. ..++++..++.. ..+..|.+||+.+++...+. .+...+.
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~--------~~~~~~~ 191 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL--------QENQWLG 191 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE--------EESSCEE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee--------cCCcccc
Confidence 1 124566565532 23467899999875433221 2334578
Q ss_pred EEEECC-CCCeEEEeecC------CeEEE-ecccCceeeeecccC-CceeEEEECCCCCEEEEEec-CC----eEEEEEc
Q psy15191 141 GCKFGP-RGDYIIAHGFQ------GSLHL-DVTTWKQIQTLPCHQ-LTITQLAFSPDDTHLVSVSR-DR----RWGLYKR 206 (312)
Q Consensus 141 ~~~~~~-~~~~l~~~~~~------~~i~~-d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d~----~i~~wd~ 206 (312)
.++|+| +++.|+....+ ..+.+ |....+......... ..+..++|+|||+.|+..+. ++ .|++||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 899999 99988877653 25666 655444333222222 35788999999998766543 22 3999999
Q ss_pred cCCCeEEEEeccCCCCcccc-eeeEEEEEcCCCceEEEe---------ccCCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191 207 QSSGRLSLVACSDKTNGVHK-RIIWGVAWSHDSRYFLTI---------SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL 276 (312)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 276 (312)
.+++........... +. .....++|+|||+.|+.. ..+..|++||+..+ .+..+
T Consensus 272 ~~g~~~~l~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~-------------~~~~l 335 (388)
T 3pe7_A 272 ETLENRQLTSMPACS---HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG-------------TQHRV 335 (388)
T ss_dssp TTCCEEEEEEECCEE---EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT-------------EEEEE
T ss_pred CCCceEEEEcCCCce---eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC-------------ceEEe
Confidence 987754433321100 00 001123799999988754 44568999999876 34555
Q ss_pred eccCc-----------ceeEEEeccCCCeEEEEec
Q psy15191 277 YGHGY-----------EIYSLAASHDGTLLASACK 300 (312)
Q Consensus 277 ~~~~~-----------~v~~~~~s~~~~~l~s~s~ 300 (312)
..+.. .+.+++|+|||+.|+..+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 55555 5788999999999888764
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=6.6e-20 Score=159.75 Aligned_cols=246 Identities=14% Similarity=0.118 Sum_probs=164.6
Q ss_pred CCCCeEEEEeccCCCceEEEEEeCCCCceEEEEcccc-CcEEEEEEecCcCcCCCCceEEEecC---CCcEEEeeecC--
Q psy15191 11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHK-SKVMAVKWVLNTSLDPEHKDLVSCSL---DKTAILWKYVS-- 84 (312)
Q Consensus 11 ~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~---dg~i~vw~~~~-- 84 (312)
..+|+.+.......+.+ .+ |+.++++. ..+..|. ..+..++|+|+ +++++++. +...++|.+..
T Consensus 30 ~~DG~~la~~s~~~g~~-~l-w~~~~g~~-~~lt~~~~~~~~~~~~spd-------~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSV-NA-YLYDGGET-VKLNREPINSVLDPHYGVG-------RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp EETTTEEEEEEEETTEE-EE-EEEETTEE-EECCSSCCSEECEECTTCS-------EEEEEEECSTTSCCEEEEEEETTS
T ss_pred CCCCCeEEEEEccCCce-eE-EEEcCCCc-EeeecccccccccccCCCC-------eEEEEeccCCCCcceEEEEEeccC
Confidence 34677776554323322 22 77766655 4455555 68999998876 57776664 55667766644
Q ss_pred C-ccc------ccccccCCCCCc-eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec
Q psy15191 85 E-GNY------LPYHMRDDSKQL-HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF 156 (312)
Q Consensus 85 ~-~~~------~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 156 (312)
. ... ......+++++. .+++.+.++.+.+||+.+++...+.. +.. .+++|+|||+++++++.
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--------~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--------LPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--------ESS--CEEEEEEETTEEEEEEE
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--------CCC--ceEEECCCCCEEEEEEE
Confidence 2 111 111223344443 23344444556699998754332221 111 78899999999998877
Q ss_pred C----CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCeEEEEeccCCCCcccceee
Q psy15191 157 Q----GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGRLSLVACSDKTNGVHKRII 229 (312)
Q Consensus 157 ~----~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v 229 (312)
+ +.|++ |+.+.+.. .+..|...+..++|+|||+.|+++..++ .|++||+.+++.. .+.. +...+
T Consensus 170 ~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-------~~~~~ 240 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-------PSKDF 240 (582)
T ss_dssp EETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC-------SCSHH
T ss_pred cCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC-------CCcCh
Confidence 6 66777 77776655 5567888899999999999999888888 8999999887765 3332 33334
Q ss_pred EEEE--------EcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecC
Q psy15191 230 WGVA--------WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 230 ~~~~--------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d 301 (312)
..++ |+|||.++++++.|+.+++|++ +. ... .+.+.|.+++|+ +++++++++.+
T Consensus 241 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~------------~~~---~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE------------RVE---APQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp HHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE------------EEC---CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred hhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC------------eec---cCCCceEEEEec-CCEEEEEEcCC
Confidence 4445 9999998999999999999998 31 222 234678899999 99999998766
Q ss_pred CC
Q psy15191 302 TK 303 (312)
Q Consensus 302 ~~ 303 (312)
..
T Consensus 303 ~~ 304 (582)
T 3o4h_A 303 ST 304 (582)
T ss_dssp TE
T ss_pred CC
Confidence 43
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=3.9e-18 Score=138.94 Aligned_cols=211 Identities=11% Similarity=0.073 Sum_probs=137.6
Q ss_pred EeCCCCc--eEEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEEEeeecCCcc---cc----------------
Q psy15191 32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAILWKYVSEGN---YL---------------- 89 (312)
Q Consensus 32 w~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~vw~~~~~~~---~~---------------- 89 (312)
|+.++++ .+..+..+...+..++|+|+ +++|++++ .++.|.+|++..... ..
T Consensus 68 ~~~~~g~~~~~~~~~~~~~~p~~~a~spd------g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 68 WQIDGQTAHKLNTVVAPGTPPAYVAVDEA------RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEETTEEEEEEEEEEESCCCSEEEEETT------TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred EEecCCcEEEeeeeecCCCCCEEEEECCC------CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 5555444 44555567788899999999 88888777 789999999963221 10
Q ss_pred -cccccCCCCCceEEEEeCCCcEEEEcCC-CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecc
Q psy15191 90 -PYHMRDDSKQLHLLSCSMDKSIIVWAPD-PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVT 165 (312)
Q Consensus 90 -~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~ 165 (312)
+....+++++.++++...++.|.+|++. +++........ ......+..++|+|+|++++++ ..++.+.+ +..
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~----~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT----MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE----CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE----cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 2224567788766666778899999998 32222111111 1122356789999999976664 56778887 433
Q ss_pred --cCce--eeeecccC------CceeEEEECCCCCEEE-EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191 166 --TWKQ--IQTLPCHQ------LTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW 234 (312)
Q Consensus 166 --~~~~--~~~~~~~~------~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (312)
+.++ ........ ..+..++|+|||++|+ +...++.|.+|++........+..... +...+..++|
T Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~----~~~~~~~~~~ 293 (347)
T 3hfq_A 218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST----EGDFPRDFDL 293 (347)
T ss_dssp TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC----SSSCCCEEEE
T ss_pred CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec----CCCCcCeEEE
Confidence 2332 12222111 4588999999999875 455689999999974322222211100 3445778999
Q ss_pred cCCCceEEEecc-CCeEEEEecC
Q psy15191 235 SHDSRYFLTISR-DGVCVVWGLG 256 (312)
Q Consensus 235 ~~~~~~l~s~~~-dg~i~iwd~~ 256 (312)
+|+|++|++++. ++.|.+|++.
T Consensus 294 spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 294 DPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEEcCCCcEEEEEEe
Confidence 999998887765 5899999664
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=2.8e-17 Score=134.68 Aligned_cols=237 Identities=15% Similarity=0.172 Sum_probs=150.5
Q ss_pred CCceEeCCCCeEEEEecc---CCCceEEEEEeCCCCce--EEEEccccCcEEEEEEecCcCcCCCCceEEEec-CCCcEE
Q psy15191 5 PGDVVNGEGGKVLYTLTN---HKSKVMAVKWNGEGGKV--LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS-LDKTAI 78 (312)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~---h~~~v~~~~w~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~dg~i~ 78 (312)
|..+....+|+.++.... ..+.|....++.++++. +.....+......+++ + +++|++++ .++.|.
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d------g~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N------GKNIVTANYSGGSIT 123 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C------SSEEEEEETTTTEEE
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C------CCEEEEEECCCCEEE
Confidence 444555566777776665 34566555566655543 3344445566777777 5 56666554 688999
Q ss_pred EeeecCCcccc----------------------cccccCCCCCceEEEEe-CCCcEEEEcCCCCcc----e-eeee--ee
Q psy15191 79 LWKYVSEGNYL----------------------PYHMRDDSKQLHLLSCS-MDKSIIVWAPDPTTG----L-WLET--AR 128 (312)
Q Consensus 79 vw~~~~~~~~~----------------------~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~----~-~~~~--~~ 128 (312)
+|++....... +....+++++.++++++ .++.|.+|++..... . .... ..
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 99997543311 02255678887665554 578999998876443 1 1110 01
Q ss_pred ecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCcee--eeec---ccCCceeEEEECCCCCEEEEEecC--C
Q psy15191 129 VGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQI--QTLP---CHQLTITQLAFSPDDTHLVSVSRD--R 199 (312)
Q Consensus 129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~--~~~~---~~~~~v~~~~~~~~~~~l~~~~~d--~ 199 (312)
... ......+..++|+|+|++++++. .++.|.+ ++.+..+. .... .+......++|+|||++|+++..+ +
T Consensus 204 ~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 204 AFK-VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEE-CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cee-cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 111 12344578899999999888777 5888888 65544332 2221 233456799999999998776654 8
Q ss_pred eEEEEEcc--CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecC
Q psy15191 200 RWGLYKRQ--SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLG 256 (312)
Q Consensus 200 ~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~ 256 (312)
.|.+|++. +++........ ....+..++|+|+|++|++++ .++.|.+|++.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~------~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQL------TGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEE------CSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEEcCCCCcEEEeeEec------CCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 99999996 23321111111 123467899999999888877 67899997665
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=3e-18 Score=138.75 Aligned_cols=202 Identities=11% Similarity=0.023 Sum_probs=142.5
Q ss_pred EeCCCCceEEEEcc-c----cCcEEEEEEecCcCcCCCCceEEEec------------CCCcEEEeeecCCccc------
Q psy15191 32 WNGEGGKVLYTLTN-H----KSKVMAVKWVLNTSLDPEHKDLVSCS------------LDKTAILWKYVSEGNY------ 88 (312)
Q Consensus 32 w~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~~~~~~l~s~~------------~dg~i~vw~~~~~~~~------ 88 (312)
|+..+++.+..+.. + ...+..++|+|+ +++|++++ .++.|.+||+.+++..
T Consensus 61 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 134 (337)
T 1pby_B 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPD------GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP 134 (337)
T ss_dssp EETTTCCEEEEEECCBTTEEEECTTCEEECTT------SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC
T ss_pred EECCCCCeEeeEEcCCcccccccccceEECCC------CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC
Confidence 66666777666653 1 225667888888 88888875 5799999999876652
Q ss_pred -ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC---------
Q psy15191 89 -LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG--------- 158 (312)
Q Consensus 89 -~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--------- 158 (312)
.+....+++++.+++++ ++.|.+||+.+.+. ....... .... .+.|+|+++.++..+..+
T Consensus 135 ~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~--~~~~~~~---~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 135 RQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL--VEDKPIQ---SWEA---ETYAQPDVLAVWNQHESSGVMATPFYT 204 (337)
T ss_dssp SSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE--EEEECST---TTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred CCcceeEECCCCCEEEEe--CCeEEEEECCCCcE--eeeeecc---ccCC---CceeCCCccEEeeeccCCCceeeeeec
Confidence 22334457788777777 68999999987542 2222211 1112 237889988766554332
Q ss_pred ---------------eEEE-ecccCcee-eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC
Q psy15191 159 ---------------SLHL-DVTTWKQI-QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221 (312)
Q Consensus 159 ---------------~i~~-d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 221 (312)
.+.+ |..+.+.. ..+..+...+.+++|+|++++++++ ++.|++||+.+.+....+..
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---- 278 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---- 278 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC----
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC----
Confidence 2344 77776654 1223456678899999999999888 79999999998777666553
Q ss_pred CcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
...+.+++|+|++++|++++.++.|++||+.++.
T Consensus 279 ----~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 279 ----PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ----SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ----CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 2346789999999999999999999999998763
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=8.3e-18 Score=136.90 Aligned_cols=215 Identities=12% Similarity=0.013 Sum_probs=152.3
Q ss_pred EEeccCCCceEEEEEeCCCCceEEEEcccc-CcEEEEEEecCcCcCCCCceE-EEecCCCcEEEeeecCCcccc------
Q psy15191 18 YTLTNHKSKVMAVKWNGEGGKVLYTLTNHK-SKVMAVKWVLNTSLDPEHKDL-VSCSLDKTAILWKYVSEGNYL------ 89 (312)
Q Consensus 18 ~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~l-~s~~~dg~i~vw~~~~~~~~~------ 89 (312)
+......+.| ..|+..+++.+..+..+. ..+..++|+|+ ++++ +++..++.|.+||+.+++...
T Consensus 14 ~v~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d------g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~ 85 (349)
T 1jmx_B 14 MIVTNYPNNL--HVVDVASDTVYKSCVMPDKFGPGTAMMAPD------NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS 85 (349)
T ss_dssp EEEEETTTEE--EEEETTTTEEEEEEECSSCCSSCEEEECTT------SSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred EEEeCCCCeE--EEEECCCCcEEEEEecCCCCCCceeEECCC------CCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc
Confidence 3333344444 348999999988887553 25788999998 7754 566678999999998776521
Q ss_pred --------cccccCCCCCceEEEEeCC------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCC
Q psy15191 90 --------PYHMRDDSKQLHLLSCSMD------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD 149 (312)
Q Consensus 90 --------~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 149 (312)
+....+++++.++++++.+ +.|.+||+.+.+.... .... .+...+.+++|+|+++
T Consensus 86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~---~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP--VRTF---PMPRQVYLMRAADDGS 160 (349)
T ss_dssp STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC--SEEE---ECCSSCCCEEECTTSC
T ss_pred ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce--eeec---cCCCcccceeECCCCc
Confidence 2334567888888888865 8999999986332111 1111 1223578899999999
Q ss_pred eEEEeecCCeEEE-ecccCceeeeecccC---------------------------------------------------
Q psy15191 150 YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ--------------------------------------------------- 177 (312)
Q Consensus 150 ~l~~~~~~~~i~~-d~~~~~~~~~~~~~~--------------------------------------------------- 177 (312)
+++++.+ +.+ |..+.+....+..+.
T Consensus 161 -l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 -LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp -EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred -EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 5555433 666 777776655443211
Q ss_pred -----------------CceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191 178 -----------------LTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR 239 (312)
Q Consensus 178 -----------------~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (312)
..+..++|+| ++++++++ ++.|.+||+.+.+....+.. ...+.+++|+|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL--------DHTYYCVAFDKKGD 307 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC--------SSCCCEEEECSSSS
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC--------CCCccceEECCCCC
Confidence 1345678889 99999888 88999999998777666652 23366899999999
Q ss_pred eEEEeccCCeEEEEecCCC
Q psy15191 240 YFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 240 ~l~s~~~dg~i~iwd~~~~ 258 (312)
+|++++.++.|++||+.+.
T Consensus 308 ~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp CEEEESBSSEEEEEETTTT
T ss_pred EEEEecCCCeEEEEecccc
Confidence 9998888999999999776
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=161.90 Aligned_cols=221 Identities=11% Similarity=0.041 Sum_probs=146.7
Q ss_pred EEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------cccccCCCCCceEEEEeC---------CCcE
Q psy15191 52 AVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYHMRDDSKQLHLLSCSM---------DKSI 111 (312)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~---------d~~i 111 (312)
.++|+|+ +++++++ .|+.|++||+.+++... +....++|++.+|+.++. ++.|
T Consensus 20 ~~~~s~d------g~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 20 FPNWISG------QEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCEESSS------SEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccEECCC------CeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence 6678887 8655554 69999999999887521 445667899999998876 7899
Q ss_pred EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cccCCce---------
Q psy15191 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PCHQLTI--------- 180 (312)
Q Consensus 112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~~~~~v--------- 180 (312)
++||+.+++.. .... + ...+..++|+|||+.|+.+. ++.|++ ++.+.+..... .++...+
T Consensus 93 ~~~d~~~g~~~--~~~~---l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 93 YIYDLSNGEFV--RGNE---L---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEETTTTEEC--CSSC---C---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred EEEECCCCccc--ccee---c---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 99999885431 0011 1 13478899999999999875 678888 66555543322 1222212
Q ss_pred --------eEEEECCCCCEEEEEecCC----------------------------------eEEEEEccCCCeE--EEEe
Q psy15191 181 --------TQLAFSPDDTHLVSVSRDR----------------------------------RWGLYKRQSSGRL--SLVA 216 (312)
Q Consensus 181 --------~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~~~~ 216 (312)
..++|+|||++|++++.|. .|++||+.+.+.. ..+.
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 4899999999999988652 7889998865432 1111
Q ss_pred ccCCCCcccceeeEEEEEcCCCceEEEeccC----CeEEEEe----cCCCCCCcccccccccceeE-EeeccCccee---
Q psy15191 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----GVCVVWG----LGEPPTEEDLVQNTLWPEVQ-KLYGHGYEIY--- 284 (312)
Q Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~--- 284 (312)
.+ .....+...+..++|+||++++++.... ..|++|| +.++.... ... ...+|...+.
T Consensus 244 ~~-~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~ 313 (719)
T 1z68_A 244 VP-AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK---------TQEHIEESRTGWAGGFF 313 (719)
T ss_dssp CC-HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG---------GGEEEEECSSSCSSSSS
T ss_pred CC-ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE---------EEecccccCCceEcccc
Confidence 00 0001167789999999998887774432 2588888 55542110 110 0135666666
Q ss_pred --EEEeccCCCeEEEE
Q psy15191 285 --SLAASHDGTLLASA 298 (312)
Q Consensus 285 --~~~~s~~~~~l~s~ 298 (312)
.++|+|||+.|+..
T Consensus 314 ~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 314 VSTPVFSYDAISYYKI 329 (719)
T ss_dssp CCCCEECTTSSCEEEE
T ss_pred CCccEECCCCCeEEEE
Confidence 88999999976653
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=2.5e-18 Score=153.79 Aligned_cols=229 Identities=10% Similarity=0.080 Sum_probs=149.9
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------ccc--ccCCCCCceEEEEeCC------
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYH--MRDDSKQLHLLSCSMD------ 108 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~--~~~~~~~~~l~~~~~d------ 108 (312)
....+++|+|+ +++++++ |++|++||+.+++... +.+ ..++|++.+++.++.+
T Consensus 17 ~~~~~~~w~~d------g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISD------HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSS------SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccccccEECCC------CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 34568899999 8888886 8999999998887521 111 3448899999998876
Q ss_pred ---CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cccCCce---
Q psy15191 109 ---KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PCHQLTI--- 180 (312)
Q Consensus 109 ---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~~~~~v--- 180 (312)
+.+.+||+.+++.. .+..+...+...+|||||+.|+.+ .++.|++ +..+.+..+.. .++...+
T Consensus 89 ~~~~~~~~~d~~~~~~~--------~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp CEEEEEEEEETTTTEEC--------CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEES
T ss_pred ccceEEEEEECCCCcEE--------EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecC
Confidence 56679999985422 123455678999999999999887 4678888 66555543321 1222222
Q ss_pred --------------eEEEECCCCCEEEEEecCC------------------------------------eEEEEEccC--
Q psy15191 181 --------------TQLAFSPDDTHLVSVSRDR------------------------------------RWGLYKRQS-- 208 (312)
Q Consensus 181 --------------~~~~~~~~~~~l~~~~~d~------------------------------------~i~~wd~~~-- 208 (312)
..+.|||||++|+..+.|. .|++||+.+
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 3589999999999876432 477778776
Q ss_pred -CC--eEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEe--ecc
Q psy15191 209 -SG--RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YGH 279 (312)
Q Consensus 209 -~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~ 279 (312)
++ ....+..+.. ...+...+..++|+|||+.++.... +..|++||+.++...... ..+..+ .+|
T Consensus 240 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~------~~~~~l~~~~~ 312 (740)
T 4a5s_A 240 SVTNATSIQITAPAS-MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC------LVARQHIEMST 312 (740)
T ss_dssp SSSCCCEEEECCCHH-HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE------CGGGCEEEECS
T ss_pred CCCcceEEEecCCcc-CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce------eEEEEeeeccC
Confidence 52 2222221100 0015667899999999997665533 337999999887410000 001111 345
Q ss_pred Cccee-----EEEeccCCCeEE-EEec
Q psy15191 280 GYEIY-----SLAASHDGTLLA-SACK 300 (312)
Q Consensus 280 ~~~v~-----~~~~s~~~~~l~-s~s~ 300 (312)
...|. .++|+|||+.|+ ..+.
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~~~~s~ 339 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFYKIISN 339 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEEEEEEC
T ss_pred CceEccCcCCCceEcCCCCEEEEEEEc
Confidence 55554 789999999887 6653
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1.7e-16 Score=125.75 Aligned_cols=229 Identities=9% Similarity=0.092 Sum_probs=155.5
Q ss_pred cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-------------ccccccC-CCCCceEEEEeC-CC
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-------------LPYHMRD-DSKQLHLLSCSM-DK 109 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-------------~~~~~~~-~~~~~~l~~~~~-d~ 109 (312)
++-..+.+++++++ ++++++...++.|.+||....... .+..+.. .+++.++++... ++
T Consensus 27 g~~~~p~~v~~~~~------g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQ------NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TCBSCEEEEEECTT------CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CccCCCceEEECCC------CCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 45577999999988 888888888999999997643221 1111222 345545555533 78
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec--ccCCceeEEEEC
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP--CHQLTITQLAFS 186 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~ 186 (312)
.|.+||... ....... ..+...+.+++++|+++++++...++.|.+ |.. .+....+. .+...+..++++
T Consensus 101 ~i~~~d~~g---~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 101 QIQIYNQYG---QFVRKFG----ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp EEEEECTTS---CEEEEEC----TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEEC
T ss_pred EEEEECCCC---cEEEEec----CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEEC
Confidence 999999432 2222221 123346789999999997777777888887 533 33443332 344568999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-eEEEEecCCCCCCcccc
Q psy15191 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-VCVVWGLGEPPTEEDLV 265 (312)
Q Consensus 187 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~ 265 (312)
|+++++++...++.|++||.. .+.+..+.... +...+..++++|+|+++++...++ .|.+||....
T Consensus 173 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g-----~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~------- 239 (286)
T 1q7f_A 173 DKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEG-----ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ------- 239 (286)
T ss_dssp SSSEEEEEEGGGTEEEEEETT-CCEEEEESCTT-----TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-------
T ss_pred CCCCEEEEECCCCEEEEEcCC-CCEEEEEccCC-----ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-------
Confidence 999988887889999999975 44444443211 224578999999999999888886 9999985432
Q ss_pred cccccceeEEeeccC--cceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 266 QNTLWPEVQKLYGHG--YEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 266 ~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.+..+..+. ..+.+++++|+|+++++ +.|+ .|++|
T Consensus 240 ------~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~-----~v~v~ 276 (286)
T 1q7f_A 240 ------LISALESKVKHAQCFDVALMDDGSVVLA-SKDY-----RLYIY 276 (286)
T ss_dssp ------EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT-----EEEEE
T ss_pred ------EEEEEcccCCCCcceeEEECCCCcEEEE-CCCC-----eEEEE
Confidence 344444433 34779999999987777 4444 49887
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=6.6e-18 Score=139.68 Aligned_cols=251 Identities=9% Similarity=-0.000 Sum_probs=159.4
Q ss_pred EeCCCCceEEEEccccCcEEE-----EEEecCcCcCCCCceEEEecC-CCc--EEEeeecCCccccc--------ccccC
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMA-----VKWVLNTSLDPEHKDLVSCSL-DKT--AILWKYVSEGNYLP--------YHMRD 95 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~-----~~~~~~~~~~~~~~~l~s~~~-dg~--i~vw~~~~~~~~~~--------~~~~~ 95 (312)
+++.++..+..+..|...... .+|+|+ |++|+.++. ++. |.+||+.+++...+ ....+
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpD------g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~ 88 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRD------GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL 88 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCC------CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE
Confidence 577788888888888766666 677777 998888877 674 78888877765221 13456
Q ss_pred CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcccee--EEEECCCCCeEEEee------------------
Q psy15191 96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY--GCKFGPRGDYIIAHG------------------ 155 (312)
Q Consensus 96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~------------------ 155 (312)
++++..|+.++.++.|++||+.+++...+... +...+. ...++|+++.++...
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQV-------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeec-------hhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence 88999999999999999999998654433221 122222 234589999887432
Q ss_pred ----cCCeEEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 156 ----FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 156 ----~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
.+..|.+ |+.+.+..... .+...+..++|+| ||+.|+.+..+ ..|.++|.............
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~----- 235 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA----- 235 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC-----
T ss_pred hccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC-----
Confidence 2345666 87777654433 4667789999999 99998887753 36888887655433322210
Q ss_pred ccceeeEEEEEcCCCceEEEecc-CC----eEEEEecCCCCCCcccccccccceeEEeeccCc---ceeEEEeccCCCeE
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISR-DG----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY---EIYSLAASHDGTLL 295 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l 295 (312)
....+..++|+|||+.|+..+. ++ .|++||+.++... .+..+.++.. ....++|+|||+.|
T Consensus 236 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----------~l~~~~~~~~~~~~~~~~~~spdg~~l 304 (388)
T 3pe7_A 236 -EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR----------QLTSMPACSHLMSNYDGSLMVGDGSDA 304 (388)
T ss_dssp -TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE----------EEEEECCEEEEEECTTSSEEEEEECCC
T ss_pred -CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE----------EEEcCCCceeeeecCCCCeEccCCCcc
Confidence 1245778899999998866543 22 3999999877321 2222222111 12234799999988
Q ss_pred EEEecCCC----cccceEEeC
Q psy15191 296 ASACKATK----PEHAAIIIW 312 (312)
Q Consensus 296 ~s~s~d~~----~~dg~i~iW 312 (312)
+....++. ..+..|++|
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 305 PVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp ------------CCCCEEEEE
T ss_pred eeEeeeccccccCCCCEEEEE
Confidence 87643310 224457665
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=8.5e-18 Score=139.30 Aligned_cols=233 Identities=10% Similarity=-0.065 Sum_probs=145.8
Q ss_pred EEeCCCCceEEEEccccCcE-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc-----------------
Q psy15191 31 KWNGEGGKVLYTLTNHKSKV-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH----------------- 92 (312)
Q Consensus 31 ~w~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----------------- 92 (312)
.|+..+++.... ..+...+ ..+.|+|+ |++|+.++.++.|.+||+.+++...+..
T Consensus 64 ~~d~~~~~~~~l-~~~~~~~~~~~~~spd------g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 136 (396)
T 3c5m_A 64 LLNLETQQAVQL-TEGKGDNTFGGFISTD------ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDC 136 (396)
T ss_dssp EEETTTTEEEEC-CCSSCBCTTTCEECTT------SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS
T ss_pred EEECCCCcEEEe-ecCCCCccccceECCC------CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccC
Confidence 356655554333 3232332 23677777 9999999999999999998876532221
Q ss_pred ----------ccCCCCCceEEEE-----eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeec
Q psy15191 93 ----------MRDDSKQLHLLSC-----SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGF 156 (312)
Q Consensus 93 ----------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 156 (312)
..+++++..++.. ..+..|.+||+.+++...+. .+...+..+.|+| +++.|+..+.
T Consensus 137 ~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 137 TKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--------QDTAWLGHPIYRPFDDSTVGFCHE 208 (396)
T ss_dssp SEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--------EESSCEEEEEEETTEEEEEEEEEC
T ss_pred CccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--------cCCcccccceECCCCCCEEEEEec
Confidence 1123333333222 34567899998875432221 2334578899999 7887776654
Q ss_pred C------CeEEE-ecccCceeeeeccc-CCceeEEEECCCCCEEEEEecC-----CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 157 Q------GSLHL-DVTTWKQIQTLPCH-QLTITQLAFSPDDTHLVSVSRD-----RRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 157 ~------~~i~~-d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
+ ..|.+ |....+........ ...+..++|+|||++|+.++.+ +.|++||+.+++.......
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~------ 282 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM------ 282 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC------
T ss_pred CCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC------
Confidence 3 24555 65544433222211 2357889999999988777554 4599999987765443321
Q ss_pred ccceeeEEEEEcC-CCceEEEec----------------cCCeEEEEecCCCCCCcccccccccceeEEeeccCc-----
Q psy15191 224 VHKRIIWGVAWSH-DSRYFLTIS----------------RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY----- 281 (312)
Q Consensus 224 ~~~~~v~~~~~~~-~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 281 (312)
. . .. +.|+| +|+++++++ .++.|++||+..+. ...+..+..
T Consensus 283 -~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~-------------~~~l~~~~~~~~~~ 345 (396)
T 3c5m_A 283 -P-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS-------------AQKLCKHSTSWDVL 345 (396)
T ss_dssp -C-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB-------------CCEEEECCCCCCCB
T ss_pred -C-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc-------------eEEccCCCCccccc
Confidence 1 1 22 88999 999888754 34689999987762 223333433
Q ss_pred ------ceeEEEeccCCCeEEEEecC
Q psy15191 282 ------EIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 282 ------~v~~~~~s~~~~~l~s~s~d 301 (312)
.+..++|+|+|+.|+.++.+
T Consensus 346 ~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 346 DGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp TTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred cccccCCCCCceEccCCCeEEEEecC
Confidence 25678999999999888643
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=7.7e-17 Score=130.28 Aligned_cols=236 Identities=12% Similarity=0.101 Sum_probs=163.2
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecCC------------------------CcEEEeeecCCccc---------ccccc
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSLD------------------------KTAILWKYVSEGNY---------LPYHM 93 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d------------------------g~i~vw~~~~~~~~---------~~~~~ 93 (312)
-+.+.+++++|+ |+++++...+ ++|.+||..+++.. .+..+
T Consensus 23 l~~v~~va~d~~------G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSK------NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTT------CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEE
T ss_pred cCCceEEEECCC------CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEE
Confidence 367899999988 8888888777 47999998876642 22234
Q ss_pred cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec----ccCCCccceeEEEECC-CCCeEEEee-cCCeEEE-eccc
Q psy15191 94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG----EVGGNTLGFYGCKFGP-RGDYIIAHG-FQGSLHL-DVTT 166 (312)
Q Consensus 94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~~i~~-d~~~ 166 (312)
..++++.++++...++.|++|+...... .+...... ....+...+..++++| ++.++++.+ .++.|++ + .+
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 4567788888888889999999865311 11111100 0023344688999999 788777775 5888888 5 34
Q ss_pred Cceeeeecc----------cCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc
Q psy15191 167 WKQIQTLPC----------HQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS 235 (312)
Q Consensus 167 ~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (312)
......+.. +-.....++++|+ +.++++...++.|++||..+++.+..+.... +...+.+++++
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~ 249 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-----FGRNVFAISYI 249 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-----TTTCEEEEEEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-----cCCCcceeeec
Confidence 555544431 2234789999998 7777777788999999998777776664321 44567789999
Q ss_pred C------CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe---eccCcceeEEEeccCCCeEEEEecCCCccc
Q psy15191 236 H------DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL---YGHGYEIYSLAASHDGTLLASACKATKPEH 306 (312)
Q Consensus 236 ~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~s~d~~~~d 306 (312)
| +++.+++...+..|++|++.++. .+..+ .++...+.+++++|+|.++++...++.
T Consensus 250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~------------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~--- 314 (329)
T 3fvz_A 250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGE------------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT--- 314 (329)
T ss_dssp TTEEEEEECCCCTTCSCCCCEEEEETTTCC------------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC---
T ss_pred CCEEEEeCCCEEeccCCCcEEEEEEcCCCe------------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE---
Confidence 9 33333333445589999988763 34444 356677899999999988888854444
Q ss_pred ceEEeC
Q psy15191 307 AAIIIW 312 (312)
Q Consensus 307 g~i~iW 312 (312)
|++|
T Consensus 315 --I~~~ 318 (329)
T 3fvz_A 315 --VWKF 318 (329)
T ss_dssp --EEEE
T ss_pred --EEEE
Confidence 8876
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=1.7e-15 Score=120.60 Aligned_cols=230 Identities=10% Similarity=-0.032 Sum_probs=156.7
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d 108 (312)
+..+..+..+.....+++|+|+ ++ +++++..++.|..|+..++ .. .+..+..++++.++++...+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~------g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPA------RSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGG------GTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CCcEEEEecCCccccCCeEeCC------CCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCC
Confidence 3444556666777899999999 77 7888888999999998876 21 12334446777777776677
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE----eec-------------CCeEEE-ecccCcee
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA----HGF-------------QGSLHL-DVTTWKQI 170 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~~-d~~~~~~~ 170 (312)
+.|.+||..+++........ .......+..++++|+|+++++ +.. .+.|.. +.. .+..
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~---~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSF---EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS 165 (296)
T ss_dssp TEEEEECSTTCCEEEEECEE---TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred CeEEEEcCCCCcEEEEeecc---CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence 89999998765432221111 0111234678999999998886 321 234444 444 3332
Q ss_pred eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE----EEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191 171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL----SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
.+..+......++|+|+++.+++.+.++.|++||+.....+ ..+ .. +...+.+++++++|+++++.
T Consensus 166 -~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~------~~~~p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 166 -APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV------EPGKTDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp -EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC------SSSCCCSEEEBTTSCEEEEE--
T ss_pred -EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC------CCCCCCeEEECCCCCEEEEc--
Confidence 23345566789999999998877778899999999732222 222 11 33446679999999977776
Q ss_pred CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe-ccCCCeEEEEecC
Q psy15191 247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA-SHDGTLLASACKA 301 (312)
Q Consensus 247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~s~d 301 (312)
++.|.+||.... .+..+..+.. +.+++| +|+++.|..++.+
T Consensus 236 ~~~v~~~~~~g~-------------~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 236 GDGVHVLTPDGD-------------ELGRVLTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp TTEEEEECTTSC-------------EEEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CCeEEEECCCCC-------------EEEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 788999997532 5566666666 899999 6899888888543
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=5.3e-15 Score=119.69 Aligned_cols=240 Identities=7% Similarity=-0.012 Sum_probs=156.1
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCC
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMD 108 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d 108 (312)
++....+..+...+.+++|+++ +++++++..++.|.+||..+++... +..+..++++.++++...+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~------g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~ 107 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQ------GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGD 107 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTT
T ss_pred cceeEEEeccCccccCcEECCC------CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCC
Confidence 4556677777778899999988 8888888889999999988765422 2233446677767766665
Q ss_pred ----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec------CCeEEE-ecccCceeeeecccC
Q psy15191 109 ----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCHQ 177 (312)
Q Consensus 109 ----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~~ 177 (312)
+.|.+||..+........ . ......+.+++++|+++++++... .+.+.. +..+.+..... ...
T Consensus 108 ~~~~~~i~~~d~~~~~~~~~~~----~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 181 (333)
T 2dg1_A 108 FKSTGGIFAATENGDNLQDIIE----D-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNI 181 (333)
T ss_dssp SSSCCEEEEECTTSCSCEEEEC----S-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEE
T ss_pred CCCCceEEEEeCCCCEEEEEEc----c-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCC
Confidence 689999988754321111 0 123456889999999987776553 244444 55443333222 233
Q ss_pred CceeEEEECCCCCEEEE-EecCCeEEEEEccC-CCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 178 LTITQLAFSPDDTHLVS-VSRDRRWGLYKRQS-SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~-~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
..+..++|+|+++.|+. .+.++.|.+||+.+ ......+.............+..++++++|+++++...++.|.+||.
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 45788999999986654 45678999999964 23222211000000001135778999999998888878899999987
Q ss_pred CCCCCCcccccccccceeEEeeccCc------ceeEEEeccCCCeEEEEecC
Q psy15191 256 GEPPTEEDLVQNTLWPEVQKLYGHGY------EIYSLAASHDGTLLASACKA 301 (312)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~s~s~d 301 (312)
... .+..+..+.. .+.+++|+|+++.|..++.+
T Consensus 262 ~g~-------------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 262 RGY-------------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TSC-------------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCC-------------EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 422 3444443332 68999999998766655443
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=1.8e-15 Score=123.66 Aligned_cols=251 Identities=9% Similarity=0.045 Sum_probs=156.1
Q ss_pred CCeEEEEeccCCCce---EEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEE
Q psy15191 13 GGKVLYTLTNHKSKV---MAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAIL 79 (312)
Q Consensus 13 ~~~~~~~~~~h~~~v---~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~v 79 (312)
.++.++........+ ....||..+++.+.++..+..+ .++|+|+ +++++++. .++.|.+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spd------g~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSND------GKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTT------SSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCC------CCEEEEEEecccccccCCCCCEEEE
Confidence 456666655332222 2344799999999999877655 8999998 99888875 3678999
Q ss_pred eeecCCcccc--------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeee-eeeccc----CCCccc
Q psy15191 80 WKYVSEGNYL--------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLET-ARVGEV----GGNTLG 138 (312)
Q Consensus 80 w~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~----~~~~~~ 138 (312)
||..+.+... ...+..++++.+|+++.. ++.|.+||+.+.+. +.. ...... ......
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~~~~~~v~~~p~~~ 163 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAAAGCWSVIPQPNRP 163 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGGTTEEEEEECTTSS
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecCCCcceeEEcCCCC
Confidence 9998766521 223455788888888764 58899999998532 222 211000 000000
Q ss_pred eeEEEECCCCCeE--------------------------------------EEeecCCeEEE-ecccCce--eeeec---
Q psy15191 139 FYGCKFGPRGDYI--------------------------------------IAHGFQGSLHL-DVTTWKQ--IQTLP--- 174 (312)
Q Consensus 139 v~~~~~~~~~~~l--------------------------------------~~~~~~~~i~~-d~~~~~~--~~~~~--- 174 (312)
..-++++++|+.+ +..+.++.+.+ |...... ...+.
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 243 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN 243 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence 0112222333322 22222333333 3221110 00000
Q ss_pred ---cc----CCceeEEEECCCCCEEEEEec-----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC
Q psy15191 175 ---CH----QLTITQLAFSPDDTHLVSVSR-----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH 236 (312)
Q Consensus 175 ---~~----~~~v~~~~~~~~~~~l~~~~~-----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (312)
.+ ......++++|+++.++++.. .+.|.+||+.+.+.+..+.. +. +.+++|+|
T Consensus 244 ~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-------~~--p~~ia~sp 314 (361)
T 2oiz_A 244 DEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-------RD--ALSMTIDQ 314 (361)
T ss_dssp HHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-------TT--CCEEEEET
T ss_pred ccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-------CC--eeEEEECC
Confidence 00 011123789999888877643 34899999999888887775 33 78999999
Q ss_pred CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191 237 DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293 (312)
Q Consensus 237 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 293 (312)
+|++|++++. +.|.+||..++.. +.+..+..+......++++|+|.
T Consensus 315 dg~~l~v~n~-~~v~v~D~~t~~l----------~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 315 QRNLMLTLDG-GNVNVYDISQPEP----------KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTEEEEECS-SCEEEEECSSSSC----------EEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCEEEEeCC-CeEEEEECCCCcc----------eeeEEeccCCCCcEEEEecCCCC
Confidence 9999998887 9999999887621 15666666777788999999986
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=3.3e-16 Score=138.51 Aligned_cols=236 Identities=14% Similarity=0.059 Sum_probs=152.4
Q ss_pred EEccccCcEEEEEEecCcCcCCCCceEEEe--cCCCcEEEeeecCCcc-c-------ccc----------c-ccCCCCCc
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSC--SLDKTAILWKYVSEGN-Y-------LPY----------H-MRDDSKQL 100 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~--~~dg~i~vw~~~~~~~-~-------~~~----------~-~~~~~~~~ 100 (312)
.+.+|...+..++|+++ ..++++. +.++...||....+.. . .+. + ...+|++.
T Consensus 18 ~~~~~~~~~~~~~~s~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 18 LVASRSGRPACVGAVGD------EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHHTCSCCEEEEEETT------EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HHhhcCCccceeEEcCC------eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCC
Confidence 45678889999999887 6666776 6688899998643322 1 111 1 11137777
Q ss_pred e-EEEEeC-CCcEEEEcCC--C-CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----------CeEEE-ec
Q psy15191 101 H-LLSCSM-DKSIIVWAPD--P-TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----------GSLHL-DV 164 (312)
Q Consensus 101 ~-l~~~~~-d~~i~i~d~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~-d~ 164 (312)
. |+..+. +..|.++++. . ++...+... ....+...+..++|+|||+.|+.++.+ ..|++ |+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~---~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV---SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCEECSCC---CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCEeccCC---ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 7 665543 5667777765 2 221111100 000145678899999999999988876 45666 77
Q ss_pred cc------Cceeeeec-ccCCceeEEEECCCCCEEEEEecCC--------eEEEEEcc-CCC--eEEEEeccCCCCcccc
Q psy15191 165 TT------WKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDR--------RWGLYKRQ-SSG--RLSLVACSDKTNGVHK 226 (312)
Q Consensus 165 ~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~~wd~~-~~~--~~~~~~~~~~~~~~~~ 226 (312)
.+ .+.. .+. .+...+..++|+|||++|+.++.++ .|++||+. ++. ....+... +.
T Consensus 169 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------~~ 241 (662)
T 3azo_A 169 DGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------PE 241 (662)
T ss_dssp TSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------TT
T ss_pred CCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------CC
Confidence 66 4433 333 4556788899999999999887553 79999998 441 33333321 35
Q ss_pred eeeEEEEEcCCCceEEEeccCC--eEEEEecCCCCCCcccccccccceeEEee-ccCcc--------eeEEEeccCCCeE
Q psy15191 227 RIIWGVAWSHDSRYFLTISRDG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYE--------IYSLAASHDGTLL 295 (312)
Q Consensus 227 ~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------v~~~~~s~~~~~l 295 (312)
..+..++|+|||++++++..++ .|++||+..+. ...+. .+... +..++|+|+++++
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA-------------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC-------------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc-------------eeecccccccccCccccccCceEeEeCCCEEE
Confidence 6788999999999888888888 56666654442 12222 22211 5678999999999
Q ss_pred EEEecCCCcccceEEeC
Q psy15191 296 ASACKATKPEHAAIIIW 312 (312)
Q Consensus 296 ~s~s~d~~~~dg~i~iW 312 (312)
++++. + .++||
T Consensus 309 ~~~~~-~-----~~~l~ 319 (662)
T 3azo_A 309 VVHGK-G-----AAVLG 319 (662)
T ss_dssp EEEBS-S-----SCEEE
T ss_pred EEEEc-C-----ccEEE
Confidence 99854 3 36665
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.5e-16 Score=130.45 Aligned_cols=234 Identities=10% Similarity=-0.040 Sum_probs=152.2
Q ss_pred EeCCCCceEEEEccccCc-----EEEEEEecCcCcCCCCceEEEecCC---CcEEEeeecCCcccc-------ccc-ccC
Q psy15191 32 WNGEGGKVLYTLTNHKSK-----VMAVKWVLNTSLDPEHKDLVSCSLD---KTAILWKYVSEGNYL-------PYH-MRD 95 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~~~~~l~s~~~d---g~i~vw~~~~~~~~~-------~~~-~~~ 95 (312)
.++.+++.+..+..+... +..++|+|+ |++|+....+ ..|.+||+.+++... ... ..+
T Consensus 15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~Spd------G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 88 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQD------GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI 88 (396)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTT------SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE
T ss_pred ecCCCCcceEEEecCCCCccceeeecCcCCCC------CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE
Confidence 577888888888766444 566677777 9887766432 468888887765421 112 335
Q ss_pred CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeE-------------------EEECCCCCeEEEe--
Q psy15191 96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG-------------------CKFGPRGDYIIAH-- 154 (312)
Q Consensus 96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-- 154 (312)
++++..|+..+.++.|++||+.+++...+.... ...... +.++|+++.++..
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 89 STDERAFFYVKNELNLMKVDLETLEEQVIYTVD-------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc-------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 888999999999999999999875543322211 111111 3567888876654
Q ss_pred ---ecCCeEEE-ecccCceeeeecccCCceeEEEECC-CCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 155 ---GFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 155 ---~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
..+..|.+ |+.+.+..... .+...+..+.|+| +++.|+..+.+ ..|.+||+.......... . .
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~-~--- 235 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-H-A--- 235 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-C-C---
T ss_pred ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-c-C---
Confidence 34456666 77776655444 4667789999999 78877776543 358888887544322211 0 0
Q ss_pred ccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEE
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLAS 297 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s 297 (312)
....+..++|+|+|++|+.++.+ +.|++||+.++. ...+..... .. ++|+| +|++|++
T Consensus 236 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-------------~~~l~~~~~-~~-~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 236 -EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE-------------NEEVMVMPP-CS-HLMSNFDGSLMVG 299 (396)
T ss_dssp -TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC-------------EEEEEECCS-EE-EEEECSSSSEEEE
T ss_pred -CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC-------------eEEeeeCCC-CC-CCccCCCCceEEE
Confidence 13457889999999988877554 459999987763 111211111 22 89999 9998888
Q ss_pred Eec
Q psy15191 298 ACK 300 (312)
Q Consensus 298 ~s~ 300 (312)
++.
T Consensus 300 ~~~ 302 (396)
T 3c5m_A 300 DGC 302 (396)
T ss_dssp EEC
T ss_pred ecC
Confidence 653
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=1.4e-15 Score=134.51 Aligned_cols=241 Identities=12% Similarity=-0.010 Sum_probs=149.9
Q ss_pred EeCCCCceEEEEccccCcEE---------EEEEe--cCcCcCCCCce-EEEec-CCCcEEEeeec--C-Ccccc------
Q psy15191 32 WNGEGGKVLYTLTNHKSKVM---------AVKWV--LNTSLDPEHKD-LVSCS-LDKTAILWKYV--S-EGNYL------ 89 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~~~~~~~-l~s~~-~dg~i~vw~~~--~-~~~~~------ 89 (312)
|....+.....+..|...+. ...|+ |+ |+. |+.++ .+..|.++++. . +....
T Consensus 52 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD------g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~ 125 (662)
T 3azo_A 52 VRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPA------GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA 125 (662)
T ss_dssp EEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSS------SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC
T ss_pred EEECCCCCcceeCCCCccccccccccCCccceeeeecC------CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc
Confidence 44333445666777766666 66666 66 887 66554 35667777765 2 33211
Q ss_pred ------cccccCCCCCceEEEEeCC----------CcEEEEcCCC------CcceeeeeeeecccC-CCccceeEEEECC
Q psy15191 90 ------PYHMRDDSKQLHLLSCSMD----------KSIIVWAPDP------TTGLWLETARVGEVG-GNTLGFYGCKFGP 146 (312)
Q Consensus 90 ------~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~------~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 146 (312)
.....+++++..|++++.+ ..|++||+.+ ++... +. .+...+..++|+|
T Consensus 126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~Sp 197 (662)
T 3azo_A 126 VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE--------LSDDAHRFVTGPRLSP 197 (662)
T ss_dssp STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE--------SSCSCSSEECCCEECT
T ss_pred CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE--------EEecCCCcccCceECC
Confidence 2233457888899988876 5899999986 33211 11 2335677889999
Q ss_pred CCCeEEEeecCC--------eEEE-ecc-cC---ceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCe
Q psy15191 147 RGDYIIAHGFQG--------SLHL-DVT-TW---KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGR 211 (312)
Q Consensus 147 ~~~~l~~~~~~~--------~i~~-d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~ 211 (312)
||++|+.++.++ .|.+ |+. +. +.......+...+..+.|+|||++++++..++ .|.+||+.+.+.
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 999999877553 6777 776 45 33333334578899999999999888888888 566666655544
Q ss_pred EEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-Eec
Q psy15191 212 LSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-AAS 289 (312)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s 289 (312)
............. -...+..++|+|+++++++++. +.++||.+..... .+..+..|...+..+ +++
T Consensus 278 ~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~-----------~~~~l~~~~~~~~~~~s~~ 345 (662)
T 3azo_A 278 TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG-----------ELVDAAGPWTEWAATLTVS 345 (662)
T ss_dssp EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT-----------EEEECCSSCCEEEEEEEEE
T ss_pred eecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC-----------cEEEecCCCCeEEEEEecC
Confidence 3322211110000 0011456899999999999998 9999995432211 456667777777776 444
Q ss_pred cCCCeEEEE
Q psy15191 290 HDGTLLASA 298 (312)
Q Consensus 290 ~~~~~l~s~ 298 (312)
++.-+++++
T Consensus 346 ~~~~~~~~~ 354 (662)
T 3azo_A 346 GTRAVGVAA 354 (662)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEc
Confidence 333333334
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=9.9e-15 Score=130.01 Aligned_cols=239 Identities=8% Similarity=-0.058 Sum_probs=159.5
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecCCC-----cEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCc---
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLDK-----TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKS--- 110 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg-----~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~--- 110 (312)
|...+..++|+|+ |++||.++.++ .|++||+.+++... .....+++++..|+.++.++.
T Consensus 123 ~~~~~~~~~~SPD------g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 123 GTVALRGYAFSED------GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp SCEEEEEEEECTT------SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCEEEEEEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccc
Confidence 4346889999999 99988765543 89999999887632 233567889989998887766
Q ss_pred -------------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-----CCeEEE-eccc-----
Q psy15191 111 -------------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-----QGSLHL-DVTT----- 166 (312)
Q Consensus 111 -------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~i~~-d~~~----- 166 (312)
|++|++.++....... .....+...+..+.|+|+|++|+..+. +..+.+ |+.+
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILC---AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEE---ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEE---eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 9999998754321111 111234455778999999999888765 457777 7765
Q ss_pred -Cc-eeeeecccCCceeEEEECCCCCEEEEEecC----CeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 167 -WK-QIQTLPCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 167 -~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
.. ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.+... ...+.... ....+..++|++++
T Consensus 274 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 274 TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-----EKDVLEWVACVRSN 347 (710)
T ss_dssp CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-----SSCEEEEEEEETTT
T ss_pred CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-----CCCeEEEEEEEcCC
Confidence 32 23344445555544 488899888776653 3699999987642 23333211 11357789999888
Q ss_pred ceEEEeccCCe--EEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 239 RYFLTISRDGV--CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 239 ~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.++++...|+. |++|++..+. .+..+..+.+.+..++++|+++.|+...... ...+.|++|
T Consensus 348 ~lv~~~~~~g~~~l~~~~~~~g~------------~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~ 410 (710)
T 2xdw_A 348 FLVLCYLHDVKNTLQLHDLATGA------------LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSF-LSPGIIYHC 410 (710)
T ss_dssp EEEEEEEETTEEEEEEEETTTCC------------EEEEECCCSSEEEEEECCTTCSEEEEEEECS-SCCCEEEEE
T ss_pred EEEEEEEECCEEEEEEEECCCCC------------EEEecCCCCceEEEEecCCCCCEEEEEEeCC-CCCCEEEEE
Confidence 88899988985 5556664442 4556666777889999999987665442222 234556554
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=1e-15 Score=137.01 Aligned_cols=231 Identities=10% Similarity=0.068 Sum_probs=147.4
Q ss_pred eCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcE-----EEEEEecCcCcCCCCceEEEecCC---------C
Q psy15191 10 NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKV-----MAVKWVLNTSLDPEHKDLVSCSLD---------K 75 (312)
Q Consensus 10 ~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~~~~~~l~s~~~d---------g 75 (312)
-..+|+.++.- .+.| ..|+..+++....+.+|.... ..++|+|+ |++|+.++.+ +
T Consensus 24 w~~dg~~~~~~---~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd------g~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 24 WISDHEYLYKQ---ENNI--LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD------GQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp ECSSSEEEEEE---TTEE--EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT------SSEEEEEEEEEECSSSCEEE
T ss_pred ECCCCcEEEEc---CCcE--EEEECCCCceEEEEechhhhhhcccccceEECCC------CCEEEEEECCeeeEEEccce
Confidence 34456766653 3333 459999999988888886432 34677888 9999998876 5
Q ss_pred cEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec--ccCCCc---------c
Q psy15191 76 TAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG--EVGGNT---------L 137 (312)
Q Consensus 76 ~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~---------~ 137 (312)
.+.+||+.+++... .....++|++..|+.+ .++.|++|++.+++...+...... .+.++. .
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 66799999887532 3445668999999887 468999999987543221110000 000111 1
Q ss_pred ceeEEEECCCCCeEEEeecCC------------------------------------eEEE-eccc---Cc--eeeeec-
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQG------------------------------------SLHL-DVTT---WK--QIQTLP- 174 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~------------------------------------~i~~-d~~~---~~--~~~~~~- 174 (312)
....+.|||||+.|+.+..|. .+.+ |+.+ .+ ....+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 223589999999998875321 3444 6665 42 111222
Q ss_pred -----ccCCceeEEEECCCCCEEEEEec----CCeEEEEEccCCC-------eEEEEeccCCCCcccceeeE-----EEE
Q psy15191 175 -----CHQLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSG-------RLSLVACSDKTNGVHKRIIW-----GVA 233 (312)
Q Consensus 175 -----~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~v~-----~~~ 233 (312)
+|...+..++|+|||+.++.... +..|++||+.+++ ....+... +...+. .++
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~------~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS------TTGWVGRFRPSEPH 325 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC------SSSCSSSSSCCCCE
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc------CCceEccCcCCCce
Confidence 37778999999999997665533 2369999998876 11111111 232332 678
Q ss_pred EcCCCceEE-Eecc-CC--eEEEEecCCC
Q psy15191 234 WSHDSRYFL-TISR-DG--VCVVWGLGEP 258 (312)
Q Consensus 234 ~~~~~~~l~-s~~~-dg--~i~iwd~~~~ 258 (312)
|+|||+.|+ ..+. +| .|++||+..+
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 999999877 6653 44 6888888765
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=1.6e-14 Score=113.19 Aligned_cols=226 Identities=12% Similarity=0.024 Sum_probs=148.9
Q ss_pred cEEEEEEecCcCcCCCCceEE-EecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCC
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLV-SCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPT 119 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~-s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 119 (312)
...++++.++ +++++ +...++.|.+|+..+.... .+..+...+++.++++.. ++.|.+||....
T Consensus 25 ~p~~i~~~~~------g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSA------GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTT------CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCC------CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 6788999888 88777 5577889999987654321 222233455666555555 889999998763
Q ss_pred cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191 120 TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD 198 (312)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 198 (312)
... ... ......+..++++++++.+++...++.|.. +..+.............+..++++|+|+.+++...+
T Consensus 98 ~~~---~~~----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 170 (270)
T 1rwi_B 98 NQT---VLP----FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDN 170 (270)
T ss_dssp CCE---ECC----CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGG
T ss_pred eEe---eee----cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCC
Confidence 321 111 122246789999999997777667777777 544433322222233467889999999977777778
Q ss_pred CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191 199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG 278 (312)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (312)
+.|.+||............ ....+.+++++++|.++++...++.|.+|+...... ......
T Consensus 171 ~~i~~~~~~~~~~~~~~~~-------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~------------~~~~~~ 231 (270)
T 1rwi_B 171 NRVVKLEAESNNQVVLPFT-------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS------------TVLPFT 231 (270)
T ss_dssp TEEEEECTTTCCEEECCCS-------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC------------EECCCC
T ss_pred CEEEEEecCCCceEeeccc-------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc------------eeeccC
Confidence 8999999876554322111 224578899999998888888888999999765421 111112
Q ss_pred cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 279 HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 279 ~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
+...+.+++++++|+++++.. .++.|+++
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~-----~~~~v~~~ 260 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADR-----GNDRVVKL 260 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEG-----GGTEEEEE
T ss_pred CCCCceeEEECCCCCEEEEEC-----CCCEEEEE
Confidence 335688999999999888884 44458764
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=4.4e-15 Score=121.75 Aligned_cols=178 Identities=9% Similarity=-0.017 Sum_probs=115.0
Q ss_pred CCCcEEEeeecC-Cccc------------ccccccCCCCCceEEEEeC-CCcEEEEcCC-CCcceeeeeeeecccCCCcc
Q psy15191 73 LDKTAILWKYVS-EGNY------------LPYHMRDDSKQLHLLSCSM-DKSIIVWAPD-PTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 73 ~dg~i~vw~~~~-~~~~------------~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~ 137 (312)
.++.+.+|++.. ++.. .+....+++++.+++++.. ++.|.+|++. +++........ ...+..
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~---~~~~g~ 193 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD---APDPGD 193 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE---CSSTTC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe---cCCCCC
Confidence 689999999974 4321 1223445788887777654 6789999998 54322221111 112345
Q ss_pred ceeEEEECCCCCeEEEeec-CCeEEE-e--cccCceee---eec-------ccCC------ceeEEE-ECCCCCEEEEEe
Q psy15191 138 GFYGCKFGPRGDYIIAHGF-QGSLHL-D--VTTWKQIQ---TLP-------CHQL------TITQLA-FSPDDTHLVSVS 196 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~-~~~i~~-d--~~~~~~~~---~~~-------~~~~------~v~~~~-~~~~~~~l~~~~ 196 (312)
.+..++|+|+|++++++.. ++.+.+ + ..+.++.. .+. +|.. .+..++ |+|||++|+++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 6889999999999888775 677777 3 33444321 111 1222 588999 999999988776
Q ss_pred cCC------eEEEEEcc-CCCeEEEEe-ccCCCCcccceeeEEEEEcC---CCceEEEeccC-CeEEEEecCCC
Q psy15191 197 RDR------RWGLYKRQ-SSGRLSLVA-CSDKTNGVHKRIIWGVAWSH---DSRYFLTISRD-GVCVVWGLGEP 258 (312)
Q Consensus 197 ~d~------~i~~wd~~-~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~d-g~i~iwd~~~~ 258 (312)
.+. .|.+|++. +++...... ... +...+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-----~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPT-----PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEEEEEEEEEC-----SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCeEEEEEECCCCCEEEeeeeeec-----CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 432 89999996 343322111 100 223355689999 89999988864 89999998764
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=1.4e-14 Score=128.63 Aligned_cols=239 Identities=10% Similarity=-0.062 Sum_probs=157.1
Q ss_pred cccCcEEEEEEecCcCcCCCCceEE-----EecCCCcEEEeeecCCccc---cc-----ccccCCCCCceEEEEeCCCc-
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLV-----SCSLDKTAILWKYVSEGNY---LP-----YHMRDDSKQLHLLSCSMDKS- 110 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~-----s~~~dg~i~vw~~~~~~~~---~~-----~~~~~~~~~~~l~~~~~d~~- 110 (312)
+|...+..++|+|+ |++|| .|+.+..|++||+.+++.. .+ ....+++++..|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPD------G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVSWD------GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEECTT------SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCT
T ss_pred CCCEEEEEEEECCC------CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCC
Confidence 35557899999999 99998 5566678999999988754 11 33456888889999988776
Q ss_pred ------------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC----eEEE-ecccCceeeee
Q psy15191 111 ------------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG----SLHL-DVTTWKQIQTL 173 (312)
Q Consensus 111 ------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~-d~~~~~~~~~~ 173 (312)
|++|++.+....... +.....+...+..+.|+|+|++|+..+.++ .+.+ +..+.+.. .+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~l---v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l 267 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTV---VHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LL 267 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEE---EECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EE
T ss_pred CCccccCCCCCEEEEEECCCCchhceE---EEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Ee
Confidence 999999876532111 111223445678999999999998877665 5666 44433332 33
Q ss_pred cccCCceeEEEECCCCCEEEEEe---cCCeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191 174 PCHQLTITQLAFSPDDTHLVSVS---RDRRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG 248 (312)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 248 (312)
..+...+....+ ++|.+++... .++.|.+||+.+... ...+.... ....+..++|+ ++.++++...|+
T Consensus 268 ~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~l~~~~~~-~~~lv~~~~~dg 340 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-----SSASLLSVSIV-GGHLSLEYLKDA 340 (695)
T ss_dssp EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-----SSCEEEEEEEE-TTEEEEEEEETT
T ss_pred ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-----CCCeEEEEEEE-CCEEEEEEEECC
Confidence 345555566666 5666444433 257899999987653 22222210 24457788888 778889999999
Q ss_pred eEEEEecCCCCCCcccccccccceeEEeecc-CcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH-GYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
..+||.+..... ....+..+ ...+..++++|+++.|+...... ...+.|++|
T Consensus 341 ~~~l~~~~~~g~-----------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~v~~~ 393 (695)
T 2bkl_A 341 TSEVRVATLKGK-----------PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSF-TTPRQIYKT 393 (695)
T ss_dssp EEEEEEEETTCC-----------EEEECCCSSSSEECCCBSCTTCSEEEEEEEET-TEEEEEEEE
T ss_pred EEEEEEEeCCCC-----------eeEEecCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEE
Confidence 888886653211 34445444 66788899999997666443222 245667665
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=3.1e-13 Score=106.87 Aligned_cols=205 Identities=10% Similarity=0.078 Sum_probs=139.1
Q ss_pred EeCCCCceEEEEc------cccCcEEEEEEe-cCcCcCCCCceEEEecC-CCcEEEeeecCCccc---------cccccc
Q psy15191 32 WNGEGGKVLYTLT------NHKSKVMAVKWV-LNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNY---------LPYHMR 94 (312)
Q Consensus 32 w~~~~~~~~~~~~------~h~~~v~~~~~~-~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~---------~~~~~~ 94 (312)
|+++ ++.+..+. +|...+..+++. ++ +.++++... ++.|.+||. +++.. .+..+.
T Consensus 56 ~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~------g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~ 127 (286)
T 1q7f_A 56 FDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNS------GDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVT 127 (286)
T ss_dssp ECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTT------TEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEE
T ss_pred ECCC-CcEEEEecccCCCcccccCceEEEEEcCC------CeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCceEEE
Confidence 7776 56666664 344678999995 55 666666643 889999994 33321 122233
Q ss_pred CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee
Q psy15191 95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL 173 (312)
Q Consensus 95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~ 173 (312)
..+++.++++...++.|.+||... ....... ...+...+..++++|+++++++...++.|.+ |.. .+....+
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 200 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQNG---NVLHKFG---CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQI 200 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS---CEEEEEE---CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEEcCCC---CEEEEeC---CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEE
Confidence 456777777777788999999653 2222221 1123346889999999997777777888888 543 3344444
Q ss_pred cc--cCCceeEEEECCCCCEEEEEecCC-eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeE
Q psy15191 174 PC--HQLTITQLAFSPDDTHLVSVSRDR-RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC 250 (312)
Q Consensus 174 ~~--~~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 250 (312)
.. +...+..++++|+|+++++...++ .|.+||.. .+.+..+.... ....+.+++++|+|+++++ +.|+.|
T Consensus 201 ~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~-----~~~~~~~i~~~~~g~l~vs-~~~~~v 273 (286)
T 1q7f_A 201 GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKV-----KHAQCFDVALMDDGSVVLA-SKDYRL 273 (286)
T ss_dssp SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESS-----CCSCEEEEEEETTTEEEEE-ETTTEE
T ss_pred ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccC-----CCCcceeEEECCCCcEEEE-CCCCeE
Confidence 32 235788999999999888887776 99999964 55555554321 2224678999999997777 568999
Q ss_pred EEEecCCC
Q psy15191 251 VVWGLGEP 258 (312)
Q Consensus 251 ~iwd~~~~ 258 (312)
++|++...
T Consensus 274 ~v~~~~~~ 281 (286)
T 1q7f_A 274 YIYRYVQL 281 (286)
T ss_dssp EEEECSCC
T ss_pred EEEEcccc
Confidence 99997653
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=3e-14 Score=115.91 Aligned_cols=218 Identities=8% Similarity=0.063 Sum_probs=141.7
Q ss_pred EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---C--cEEEeeecCCcccc------cccccCCCCC
Q psy15191 31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---K--TAILWKYVSEGNYL------PYHMRDDSKQ 99 (312)
Q Consensus 31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g--~i~vw~~~~~~~~~------~~~~~~~~~~ 99 (312)
.|+.++++.. .+ ..+..++|+|+ |++|+.++.+ + .|.+|++.+++... +....++|++
T Consensus 47 ~~d~~~~~~~-~l----~~~~~~~~SpD------g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg 115 (347)
T 2gop_A 47 IENLKNNARR-FI----ENATMPRISPD------GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDS 115 (347)
T ss_dssp EEETTTCCEE-EE----ESCEEEEECTT------SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTS
T ss_pred EEeCCCCceE-Ec----ccCCCeEECCC------CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCC
Confidence 3677777643 33 46888999999 9998887654 3 37777877665422 3345568888
Q ss_pred ceEEEEeCC---------------------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE
Q psy15191 100 LHLLSCSMD---------------------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII 152 (312)
Q Consensus 100 ~~l~~~~~d---------------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 152 (312)
..|+.++.+ ..|.+||+.+++. ..... . . .+..+.|+|+| +++
T Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~-----~-~-~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 116 RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFE-----K-P-RFSSGIWHRDK-IVV 185 (347)
T ss_dssp SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEE-----E-E-TTCEEEEETTE-EEE
T ss_pred CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--Eeeec-----C-C-CcccccCCCCe-EEE
Confidence 888877642 5688999887542 11111 1 1 56789999999 777
Q ss_pred EeecCC---------eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC--------CeEEEEEccCCCeEEE
Q psy15191 153 AHGFQG---------SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD--------RRWGLYKRQSSGRLSL 214 (312)
Q Consensus 153 ~~~~~~---------~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~ 214 (312)
++..++ .+.+ | +.+... +..+ ..+..+ +|||++|+.++.+ ..|.+|| +.+.. .
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~ 256 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEK-MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-G 256 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEE-EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-E
T ss_pred EEecccccccccccccEEEeC--CCceEE-eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceE-e
Confidence 765432 3333 5 343332 2223 444444 8999998887754 3677777 33332 2
Q ss_pred EeccCCCCcccceeeEE-EEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC
Q psy15191 215 VACSDKTNGVHKRIIWG-VAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293 (312)
Q Consensus 215 ~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 293 (312)
+... +...+.. +.|+ ++ ++++++.++.++|| +..+ ....+..+...|.+++|+| .
T Consensus 257 l~~~------~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-------------~~~~~~~~~~~v~~~~~s~--~ 312 (347)
T 2gop_A 257 ILDE------VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-------------EIKPIAKGRHWIMGFDVDE--I 312 (347)
T ss_dssp SSTT------CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-------------SEEEEECSSSEEEEEEESS--S
T ss_pred cccc------CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-------------ceEEEecCCCeEEeeeeeC--c
Confidence 2211 4556776 8999 88 88999999999999 8732 1233444577899999999 6
Q ss_pred eEEEEecCC
Q psy15191 294 LLASACKAT 302 (312)
Q Consensus 294 ~l~s~s~d~ 302 (312)
++++++.++
T Consensus 313 ~~~~~~~~~ 321 (347)
T 2gop_A 313 VVYLKETAT 321 (347)
T ss_dssp EEEEEECSS
T ss_pred EEEEEcCCC
Confidence 777776544
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=7.2e-14 Score=112.73 Aligned_cols=250 Identities=8% Similarity=-0.023 Sum_probs=158.2
Q ss_pred EeCCCCceEEEEc------cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCC
Q psy15191 32 WNGEGGKVLYTLT------NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSK 98 (312)
Q Consensus 32 w~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~ 98 (312)
+|+++++....+. ........+.+.. ++++++...++.|.+||..+++... +..+..+++
T Consensus 22 ~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-------~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~ 94 (328)
T 3dsm_A 22 YDPATCEVENEVFYRANGFKLGDVAQSMVIRD-------GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD 94 (328)
T ss_dssp EETTTTEEECSHHHHHHSSCCBSCEEEEEEET-------TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET
T ss_pred EECCCCEEhhhhHhhhcCcccCccceEEEEEC-------CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC
Confidence 6888887765442 1224467777743 4667777778999999999887632 112222345
Q ss_pred CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee--cCCeEEE-ecccCceeeeecc
Q psy15191 99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG--FQGSLHL-DVTTWKQIQTLPC 175 (312)
Q Consensus 99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~-d~~~~~~~~~~~~ 175 (312)
+..+++...++.|.+||..+.+ ...........+....+..+++ ++..++++. .++.|.+ |..+.+....+..
T Consensus 95 g~lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 95 EKAYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TEEEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 5444444478999999998744 3333332221111224556777 445555554 3778877 9998888777663
Q ss_pred cCCceeEEEECCCCCEEEEEecC----------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191 176 HQLTITQLAFSPDDTHLVSVSRD----------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
......++++|+|++++++..+ +.|.++|..+.+....+... ....+..++++|++++|+.+.
T Consensus 171 -g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~------~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 171 -GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK------LGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp -SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC------TTCCCEEEEECTTSCEEEEES
T ss_pred -CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC------CCCCceeEEEecCCCEEEEEc
Confidence 3445789999999977776654 78999999887766555432 123578899999999888776
Q ss_pred cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEEEecCCCcccceEEeC
Q psy15191 246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s~d~~~~dg~i~iW 312 (312)
. .|.+||..++..... ..+.........++++| ++.++++...|- ..++.|.+|
T Consensus 244 ~--~v~~~d~~t~~~~~~----------~~~~~~~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~ 298 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVR----------PFLEFRDTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRY 298 (328)
T ss_dssp S--SEEEEETTCSSCCSS----------CSBCCCSSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEE
T ss_pred c--EEEEEECCCCceeee----------eeecCCCCceEEEEEcCCCCeEEEEccccc-ccCCEEEEE
Confidence 5 899999877642110 01111245678999999 556666652222 134557664
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=1.3e-13 Score=111.37 Aligned_cols=216 Identities=10% Similarity=0.053 Sum_probs=151.7
Q ss_pred EEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc--cc----------------cc
Q psy15191 30 VKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG--NY----------------LP 90 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~--~~----------------~~ 90 (312)
+.|++++++.+..+. ++-..+..+++.|+ |+++++...++.|++|+..... .. .+
T Consensus 72 ~~~d~~~g~~~~~~~~~~~~~p~gia~d~~------g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P 145 (329)
T 3fvz_A 72 LVIDPNNAEILQSSGKNLFYLPHGLSIDTD------GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQP 145 (329)
T ss_dssp EEECTTTCCEEEEECTTTCSSEEEEEECTT------SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred EEEECCCCeEEeccCCCccCCceEEEECCC------CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCC
Confidence 558998888887765 45568999999988 8889998889999999986542 11 12
Q ss_pred ccccCCC-CCceEEEEe-CCCcEEEEcCCCCcceeeeeeeeccc-----CCCccceeEEEECCC-CCeEEEeecCCeEEE
Q psy15191 91 YHMRDDS-KQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEV-----GGNTLGFYGCKFGPR-GDYIIAHGFQGSLHL 162 (312)
Q Consensus 91 ~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~ 162 (312)
..+..++ ++.++++.+ .++.|++|+... ..+........ ..+...+..++++|+ +.++++...++.|++
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 2334466 666777775 689999999542 22222211100 122345789999998 676777777888888
Q ss_pred -ecccCceeeeec--ccCCceeEEEECC------CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191 163 -DVTTWKQIQTLP--CHQLTITQLAFSP------DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA 233 (312)
Q Consensus 163 -d~~~~~~~~~~~--~~~~~v~~~~~~~------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 233 (312)
+..+++.+..+. .+...+..++++| +++.+++...+..|++||..+.+.+..+..... +...+.+++
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~----~~~~p~~ia 298 (329)
T 3fvz_A 223 FKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK----HFDMPHDIV 298 (329)
T ss_dssp EETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS----CCSSEEEEE
T ss_pred EECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC----ccCCeeEEE
Confidence 777777776663 4566788999999 333333333455899999998887776642111 455688999
Q ss_pred EcCCCceEEEeccCCeEEEEecCCC
Q psy15191 234 WSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 234 ~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
++|+|.++++...++.|++|++...
T Consensus 299 ~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCcc
Confidence 9999998899999999999997643
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=4e-13 Score=105.38 Aligned_cols=204 Identities=12% Similarity=0.060 Sum_probs=145.7
Q ss_pred CceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN 135 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 135 (312)
+++|++++.|+.|.+||.++++.. ........+++.+++ +.++.|..||. +++..+. ... +.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~--~~~----~~ 75 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN--IAA----PA 75 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE--EEC----CT
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE--EcC----CC
Confidence 589999999999999999787752 123334467777777 45778999998 5443333 221 12
Q ss_pred ccceeEEEECCCCCeEEEeec-CCeEEE-ecccCceeeeec------ccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGF-QGSLHL-DVTTWKQIQTLP------CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 207 (312)
...+.++.+.++|+.+++.+. ++.+.. |. +.+.+..+. .+......+++.++|+++++...++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 345788999999999998876 666655 54 455544433 122345567789999999999999999999998
Q ss_pred CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC------c
Q psy15191 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG------Y 281 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 281 (312)
++.+..+... ..+.++...++|+++++++.++.|..+|..++. .+.++..+. .
T Consensus 155 -G~~~w~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~------------~~w~~~~~~~~~~~l~ 213 (276)
T 3no2_A 155 -GQLLNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR------------IVRRVNANDIEGVQLF 213 (276)
T ss_dssp -SCEEEEEECS--------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC------------EEEEEEGGGSBSCCCS
T ss_pred -CCEEEEEECC--------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc------------EEEEecCCCCCCcccc
Confidence 7777776642 234567788999999999988899999988763 344443221 2
Q ss_pred ceeEEEeccCCCeEEEEe
Q psy15191 282 EIYSLAASHDGTLLASAC 299 (312)
Q Consensus 282 ~v~~~~~s~~~~~l~s~s 299 (312)
.+.+++..++|.++++..
T Consensus 214 ~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 214 FVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred ccccceEcCCCCEEEEec
Confidence 367888889998888874
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=1.9e-13 Score=111.18 Aligned_cols=195 Identities=10% Similarity=0.133 Sum_probs=125.5
Q ss_pred CCcEEEeeecCCcccc---cccccCCCCCceEEEEeCC---C--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191 74 DKTAILWKYVSEGNYL---PYHMRDDSKQLHLLSCSMD---K--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG 145 (312)
Q Consensus 74 dg~i~vw~~~~~~~~~---~~~~~~~~~~~~l~~~~~d---~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (312)
++.|.+||+.+++... +....++|++..|+..+.+ + .|.+|++.+++...+.. ... +..++|+
T Consensus 42 ~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~--------~~~-~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE--------AKN-IRSLEWN 112 (347)
T ss_dssp EEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE--------ESE-EEEEEEC
T ss_pred cceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc--------CCC-ccceeEC
Confidence 5678999988776532 3335668889888877654 2 37788887644322211 112 8899999
Q ss_pred CCCCeEEEeecC---------------------------CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec
Q psy15191 146 PRGDYIIAHGFQ---------------------------GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR 197 (312)
Q Consensus 146 ~~~~~l~~~~~~---------------------------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (312)
|+++.|+.++.+ ..+.+ |+.+.+....+.. . .+..++|+||| +++++..
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEEC
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEec
Confidence 999998887642 34655 7777665344443 3 78899999999 7777765
Q ss_pred CC-------eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC--------CeEEEEecCCCCCCc
Q psy15191 198 DR-------RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD--------GVCVVWGLGEPPTEE 262 (312)
Q Consensus 198 d~-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~ 262 (312)
++ ...+|.+. ......+.. + ..+..+ +|+|++|+.++.+ ..|++|| .+.
T Consensus 190 ~~~~~~~~~~~~l~~~d-~~~~~~l~~-------~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~--- 253 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWE-DGKEEKMFE-------K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE--- 253 (347)
T ss_dssp CCSSCCSSCCEEEEEEE-TTEEEEEEE-------E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---
T ss_pred ccccccccccccEEEeC-CCceEEecc-------C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc---
Confidence 42 44555554 333333332 2 334333 9999998877644 3688887 321
Q ss_pred ccccccccceeEEeeccCcceeE-EEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYS-LAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
......++...+.. +.|+ ++ ++++++.+ +.++||
T Consensus 254 ---------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~-----~~~~l~ 288 (347)
T 2gop_A 254 ---------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEE-----GSVNLY 288 (347)
T ss_dssp ---------EEESSTTCCSEEEEEEEET-TE-EEEEEEET-----TEEEEE
T ss_pred ---------eEeccccCCcccCCccEEc-Cc-EEEEEecC-----CcEEEE
Confidence 22223455677886 9999 88 88888544 448876
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.62 E-value=1.2e-13 Score=111.73 Aligned_cols=235 Identities=9% Similarity=-0.001 Sum_probs=144.5
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-----cccccccCCCCCceEEEEeCCCcEEEEcCCCCcce
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-----YLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL 122 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 122 (312)
..|.+++|+++ +..++..+.++.++.|.-..-.. ..+....+++++.+++++..++.|.+||..+.+..
T Consensus 6 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGK------SNSAVPIISESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGG------GGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCC------ccceeEEeecccCcccccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 34667777777 66666667788888883221110 11223334567777778888999999998875432
Q ss_pred eeeeeeecccCCCccceeEEEECCCCCeEEEeecC----CeEEE-ecccCceeeeec--ccCCceeEEEECCCCCEEEEE
Q psy15191 123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----GSLHL-DVTTWKQIQTLP--CHQLTITQLAFSPDDTHLVSV 195 (312)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~-d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 195 (312)
... . .+...+.+++++|+++++++...+ +.|.+ |..+......+. .+...+..++++|+|+++++.
T Consensus 80 ~~~--~-----~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 80 RPF--V-----SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp EEE--E-----CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred EEe--e-----CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 211 1 234568999999999977776665 46666 766655442222 234578999999999877766
Q ss_pred ec------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCCCCCCccccccc
Q psy15191 196 SR------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGEPPTEEDLVQNT 268 (312)
Q Consensus 196 ~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~ 268 (312)
.. .+.|..+|..+.+...... ....+..++|+|++++| ++.+.++.|++||+............
T Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~- 223 (333)
T 2dg1_A 153 FRGYSTNPLGGVYYVSPDFRTVTPIIQ--------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA- 223 (333)
T ss_dssp CCCBTTBCCEEEEEECTTSCCEEEEEE--------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE-
T ss_pred ccccccCCCceEEEEeCCCCEEEEeec--------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc-
Confidence 53 2456666655433332222 22346789999999855 45566889999998643211000000
Q ss_pred ccceeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
.....+.++ ..+..++++++|+++++...++ .|.+|
T Consensus 224 --~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~-----~v~~~ 259 (333)
T 2dg1_A 224 --TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQG-----RVLVF 259 (333)
T ss_dssp --EEEEECCSS-SEEEEEEEBTTCCEEEEEETTT-----EEEEE
T ss_pred --eEEEecCCC-CCCCceEECCCCCEEEEEcCCC-----EEEEE
Confidence 011112222 4678899999999888874433 37664
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.62 E-value=4.5e-13 Score=104.90 Aligned_cols=232 Identities=11% Similarity=-0.017 Sum_probs=146.2
Q ss_pred CCCceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec
Q psy15191 4 EPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV 83 (312)
Q Consensus 4 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~ 83 (312)
.|..+.....|+...+.....+.|. .|++.++........+...+.++++.++ ++++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~p~~i~~~~~------g~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVV--KLATGSTGTTVLPFNGLYQPQGLAVDGA------GTVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEE--EECC-----EECCCCSCCSCCCEEECTT------CCEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEE--EecCCCcccceEeeCCcCCcceeEECCC------CCEEEEcC-CCEEEEEeCC
Confidence 4444544455653321333444553 2566544432222233456788999887 88777766 8899999977
Q ss_pred CCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee
Q psy15191 84 SEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155 (312)
Q Consensus 84 ~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 155 (312)
..... .+..+...+++.++++...++.|.+|+..+..... . .......+.+++++++++.+++..
T Consensus 96 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~--~-----~~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 96 SNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV--L-----PFTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE--C-----CCCSCCSCCCEEECTTCCEEEEEG
T ss_pred CceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe--e-----ccccCCCceeEEEeCCCCEEEEEC
Confidence 65432 12222335566667776778889999765432111 1 112223578899999998777666
Q ss_pred cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE
Q psy15191 156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW 234 (312)
Q Consensus 156 ~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (312)
.++.|.+ |............+...+..++++++|..+++...++.|.+||........ ... .+...+.++++
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~------~~~~~p~~i~~ 241 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF------TGLNTPLAVAV 241 (270)
T ss_dssp GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC------CSCSCEEEEEE
T ss_pred CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc------CCCCCceeEEE
Confidence 6777777 665544433322333668899999999877777778899999987544332 111 02345789999
Q ss_pred cCCCceEEEeccCCeEEEEecCCC
Q psy15191 235 SHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 235 ~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
+|+|+++++...++.|+++++...
T Consensus 242 ~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 242 DSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCCEEEEECCCCEEEEEcCCCc
Confidence 999998899999999999988665
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=8.1e-12 Score=99.13 Aligned_cols=222 Identities=10% Similarity=-0.016 Sum_probs=149.2
Q ss_pred EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCceEEEEeCCCcEEE
Q psy15191 43 LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQLHLLSCSMDKSIIV 113 (312)
Q Consensus 43 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i 113 (312)
+..+...+.++++.++ |+++++...++.|.+||.. +.... +..+...+++..+++...++.|..
T Consensus 10 ~~~~~~~~~~i~~d~~------g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDK------GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTT------SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCC------CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 4445678999999888 8888777778899999877 43311 122233456666666666788999
Q ss_pred EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEECCCCCE
Q psy15191 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFSPDDTH 191 (312)
Q Consensus 114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 191 (312)
|+... + . .... .......+..+++.++++.+++...++.+.. |. +...... .......+..++++++++.
T Consensus 83 ~~~~g-~-~--~~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 83 ITKKG-I-I--KEYT---LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL 154 (299)
T ss_dssp ECTTS-C-E--EEEE---CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred ECCCC-c-E--EEEe---CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE
Confidence 98762 1 1 1111 1123456889999999988777666777776 55 3333322 1223456899999999988
Q ss_pred EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191 192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271 (312)
Q Consensus 192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 271 (312)
+++...++.|..||. +.+... +.... ....+.+++++++++++++...++.|.+||. ++..
T Consensus 155 ~v~~~~~~~i~~~~~-~g~~~~-~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~----------- 215 (299)
T 2z2n_A 155 WFTENQNNAIGRITE-SGDITE-FKIPT-----PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI----------- 215 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEE-EECSS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-----------
T ss_pred EEEeCCCCEEEEEcC-CCcEEE-eeCCC-----CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-----------
Confidence 777777789999998 444332 22211 2345778999999998888777889999998 4421
Q ss_pred eeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 272 EVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
....+..+...+.+++++++|+++++.
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEEECCCCCCCceeEEECCCCCEEEec
Confidence 111223345678899999999977776
No 188
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.60 E-value=9.3e-12 Score=103.26 Aligned_cols=230 Identities=10% Similarity=-0.010 Sum_probs=147.8
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCC--cEEEEcCCC
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDK--SIIVWAPDP 118 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~ 118 (312)
.....|+|.++ ++++++...++.|++||..++.... .. ..+.+++..++++..++ .|.+++...
T Consensus 131 ~~P~~la~d~~------g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGN------NTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECST------TEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCC------CCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 46788999888 8888888888999999998765421 12 44466777788887765 688887764
Q ss_pred CcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee----ecccCCce--eEEEECCC-C
Q psy15191 119 TTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT----LPCHQLTI--TQLAFSPD-D 189 (312)
Q Consensus 119 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~----~~~~~~~v--~~~~~~~~-~ 189 (312)
.... ... ..... ....+.+++++|++..|+++..++.|+. |..+...... ..++...- ..++|+|+ +
T Consensus 204 ~~~~--~~~--g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 204 GWAP--TRI--GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp TTCE--EEE--EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred Ccee--EEe--eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 3221 111 01111 3455788999995555666777787776 6665543222 11222222 39999995 6
Q ss_pred CEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc--------ccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCC
Q psy15191 190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG--------VHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPT 260 (312)
Q Consensus 190 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~ 260 (312)
.++++-..++.|+.|+.... ...+.+...... ..-.....++++|+|+++++-+ .++.|+.|++..+
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G-- 355 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG-- 355 (409)
T ss_dssp EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--
T ss_pred EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--
Confidence 66666667889999987643 333322210000 0123478899999999888888 8899999997665
Q ss_pred CcccccccccceeEEeecc---------------CcceeEEEeccCCCeEEEEecCCC
Q psy15191 261 EEDLVQNTLWPEVQKLYGH---------------GYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
.+..+.++ -.....++++++|.++++-..++.
T Consensus 356 -----------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 356 -----------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp -----------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred -----------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 34444443 245789999999988888844433
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=4.1e-11 Score=95.04 Aligned_cols=231 Identities=9% Similarity=-0.055 Sum_probs=152.0
Q ss_pred EeCCCCceEEE-EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-c-------ccccccCCCCCceE
Q psy15191 32 WNGEGGKVLYT-LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-Y-------LPYHMRDDSKQLHL 102 (312)
Q Consensus 32 w~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-~-------~~~~~~~~~~~~~l 102 (312)
|+++ ++.... +..+...+.++++.++ +.++++...++.|..|+...... . .+..+...+++.++
T Consensus 41 ~d~~-~~~~~~~~~~~~~~~~~i~~~~~------g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 113 (299)
T 2z2n_A 41 INLD-GKITEYPLPTPDAKVMCLTISSD------GEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIW 113 (299)
T ss_dssp ECTT-CCEEEEECSSTTCCEEEEEECTT------SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred EcCC-CCeEEecCCcccCceeeEEECCC------CCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEE
Confidence 6666 443322 2234567899999888 88888877788899998752211 0 11222234566666
Q ss_pred EEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCce
Q psy15191 103 LSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTI 180 (312)
Q Consensus 103 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v 180 (312)
++...++.|..||. +.+... .. .......+..+++.++++.+++...++.+.. |. +.+.... .......+
T Consensus 114 v~~~~~~~i~~~d~-~g~~~~---~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 114 FTEMNGNRIGRITD-DGKIRE---YE---LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEE---EE---CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEecCCceEEEECC-CCCEEE---ec---CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 66667788999988 322111 11 1123456889999999987776666677766 66 4444432 22334568
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191 181 TQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 181 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
..++++++++.+++...++.|.+||. +.... .+.... ....+.+++++++|+++++...++.|..||.. +
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g-- 255 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT-----PNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N-- 255 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-----TTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T--
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCC-----CCCCceeEEECCCCCEEEeccCCceEEEECCC-C--
Confidence 89999999997777667889999998 55432 232211 34568899999999988877778899999973 2
Q ss_pred CcccccccccceeEE--eeccCcceeEEEeccCCCeEEEEe
Q psy15191 261 EEDLVQNTLWPEVQK--LYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
.+.. +..+...+.++++ ++|+++++.+
T Consensus 256 -----------~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 256 -----------IIEEYPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp -----------EEEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred -----------ceEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence 1222 2344567899999 9998888763
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=2.1e-11 Score=104.91 Aligned_cols=271 Identities=6% Similarity=0.018 Sum_probs=174.2
Q ss_pred eEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeec--CC
Q psy15191 8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV--SE 85 (312)
Q Consensus 8 v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~--~~ 85 (312)
+|..+.+..++......+.| ..+|..+++.+.++... ..+..+.|+|+ |+++++++.|+.|.+||+. +.
T Consensus 160 ~~~~d~~~~~~V~~~~~~~V--~viD~~t~~v~~~i~~g-~~p~~v~~SpD------Gr~lyv~~~dg~V~viD~~~~t~ 230 (567)
T 1qks_A 160 MNDWDLENLFSVTLRDAGQI--ALIDGSTYEIKTVLDTG-YAVHISRLSAS------GRYLFVIGRDGKVNMIDLWMKEP 230 (567)
T ss_dssp CSCCCGGGEEEEEETTTTEE--EEEETTTCCEEEEEECS-SCEEEEEECTT------SCEEEEEETTSEEEEEETTSSSC
T ss_pred ccccCCCceEEEEeCCCCeE--EEEECCCCeEEEEEeCC-CCccceEECCC------CCEEEEEcCCCeEEEEECCCCCC
Confidence 34444455555555444544 33789999999998743 46779999999 9999999999999999995 54
Q ss_pred ccc-------ccccccCC----CCCceEEEEe-CCCcEEEEcCCCCcceeeeeeeeccc--CC---C-ccceeEEEECCC
Q psy15191 86 GNY-------LPYHMRDD----SKQLHLLSCS-MDKSIIVWAPDPTTGLWLETARVGEV--GG---N-TLGFYGCKFGPR 147 (312)
Q Consensus 86 ~~~-------~~~~~~~~----~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~--~~---~-~~~v~~~~~~~~ 147 (312)
+.. ....+.++ +++.+++++. .+++|.++|..+.+. +........ .. | ...+..+..+++
T Consensus 231 ~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 231 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred cEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE--EEEEeccccccccccccCCCceEEEEEcCC
Confidence 431 12223345 4777766655 558999999887443 333332211 11 1 225778888888
Q ss_pred CCeEE-EeecCCeEEE-ecccCcee--eeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEec-cCCC
Q psy15191 148 GDYII-AHGFQGSLHL-DVTTWKQI--QTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVAC-SDKT 221 (312)
Q Consensus 148 ~~~l~-~~~~~~~i~~-d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~-~~~~ 221 (312)
+..++ ....+|.|.+ |..+-+.. ..+ ........+.|+|++++++++. .++.|.++|+.+.+....+.. ....
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred CCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 66544 4456688887 65543321 122 2334567889999999887765 578999999998877666553 2111
Q ss_pred CcccceeeEEEEEcCCC-ceEEEec-cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 222 NGVHKRIIWGVAWSHDS-RYFLTIS-RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 222 ~~~~~~~v~~~~~~~~~-~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
|.+.-..+ ++|++ ..++++. .++.|.++|....... ...|+.++.+......-..+..+|++++|....
T Consensus 388 ---hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~-----~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 388 ---HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHP-----DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp ---CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred ---CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc-----cccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 33211112 57874 4445543 4689999998764321 223567787776544445678999999888764
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=3e-12 Score=114.59 Aligned_cols=237 Identities=12% Similarity=0.006 Sum_probs=149.9
Q ss_pred ccCcEEEEEEecCcCcCCCCceEEEecCC-----CcEEEeeecCCccccc-------ccccCCCCCceEEEEeCCCc---
Q psy15191 46 HKSKVMAVKWVLNTSLDPEHKDLVSCSLD-----KTAILWKYVSEGNYLP-------YHMRDDSKQLHLLSCSMDKS--- 110 (312)
Q Consensus 46 h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----g~i~vw~~~~~~~~~~-------~~~~~~~~~~~l~~~~~d~~--- 110 (312)
|...+..++|+|+ |++||.++.+ ..|++||+.+++.... ....++++ ..|+.++.++.
T Consensus 161 ~~~~~~~~~~SPD------G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 161 GATALDAWAASDD------GRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp --EEEEEEEECTT------SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred CCEEEEeEEECCC------CCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 3346888999998 9998877544 4699999998876321 23456777 77877776554
Q ss_pred -----------EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ecccC--ceee
Q psy15191 111 -----------IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DVTTW--KQIQ 171 (312)
Q Consensus 111 -----------i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~~~~--~~~~ 171 (312)
|++|++.+........ .....+...+..+.|+|+|++|+..+.++ .+.+ |+.+. +...
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv---~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPV---FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEE---ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEE---eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 8899987654221111 11122333578899999999988877544 6777 76655 3123
Q ss_pred eecccCCceeEEEECCCCCEEEEEecC----CeEEEEEccCC-CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191 172 TLPCHQLTITQLAFSPDDTHLVSVSRD----RRWGLYKRQSS-GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
.+..+...+.... +|+|+.|+..+.+ +.|.+||+.+. .....+... +...+..++++ ++.++++...
T Consensus 311 ~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~------~~~~l~~~~~~-~~~lv~~~~~ 382 (741)
T 1yr2_A 311 ALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE------SKDNLESVGIA-GNRLFASYIH 382 (741)
T ss_dssp EEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC------CSSEEEEEEEE-BTEEEEEEEE
T ss_pred EecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC------CCCeEEEEEEE-CCEEEEEEEE
Confidence 3333444444443 4889988877653 45999998875 233333322 33346678887 6678888889
Q ss_pred CCeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 247 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|+..+||.+..... ....+.. +...+..++++|+++.|+...... ...+.|++|
T Consensus 383 dg~~~l~~~~~~g~-----------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~ 437 (741)
T 1yr2_A 383 DAKSQVLAFDLDGK-----------PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF-TQPATVLAL 437 (741)
T ss_dssp TTEEEEEEEETTSC-----------EEEECBCSSSCEEEEEECCBTCSCEEEEEEET-TEEEEEEEE
T ss_pred CCEEEEEEEeCCCC-----------ceeeccCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEE
Confidence 99877776542211 3444443 356788999999987665432211 235566654
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=5.1e-12 Score=101.12 Aligned_cols=227 Identities=12% Similarity=0.059 Sum_probs=141.5
Q ss_pred ccccCcEEEEEEecCcCcCCCCceEEE-------ecCCCcEEEeeecCCcccc------------cccccCCCC-CceEE
Q psy15191 44 TNHKSKVMAVKWVLNTSLDPEHKDLVS-------CSLDKTAILWKYVSEGNYL------------PYHMRDDSK-QLHLL 103 (312)
Q Consensus 44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s-------~~~dg~i~vw~~~~~~~~~------------~~~~~~~~~-~~~l~ 103 (312)
...-....+++|.++ +.++++ +..++.|.+||..+++... +..+...++ +. +.
T Consensus 14 ~~~~~~~~~~~~~~~------g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~ 86 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKN------GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LF 86 (314)
T ss_dssp ECCCTTCEEEEECTT------SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EE
T ss_pred hccCCCccCceECCC------CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EE
Confidence 333456778899877 777777 6778899999977665421 122233455 54 44
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC---------------CeEEE-ecccC
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ---------------GSLHL-DVTTW 167 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------~~i~~-d~~~~ 167 (312)
.++..+.|.+||.. ++..... .. .........+.+++++++++++++...+ +.+.. +.. .
T Consensus 87 v~~~~~~l~~~d~~-g~~~~~~-~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-GTFEEIA-KK-DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp EEETTTEEEEEETT-SCEEECC-SB-CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred EEECCCCEEEEeCC-CCEEEEE-ec-cCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 44444578889887 4322110 00 0001123457899999999887776554 34544 544 3
Q ss_pred ceeeeecccCCceeEEEEC----CCCCEEEEE-ecCCeEEEEEccCCCeEE---EEeccCCCCcccc-eeeEEEEEcCCC
Q psy15191 168 KQIQTLPCHQLTITQLAFS----PDDTHLVSV-SRDRRWGLYKRQSSGRLS---LVACSDKTNGVHK-RIIWGVAWSHDS 238 (312)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~~wd~~~~~~~~---~~~~~~~~~~~~~-~~v~~~~~~~~~ 238 (312)
+..... .+......++++ |+++.++.+ ..++.|.+||......+. .+.... .+. ..+..++++++|
T Consensus 163 ~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 163 QMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP----GTHEGGADGMDFDEDN 237 (314)
T ss_dssp CEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC----CCSSCEEEEEEEBTTC
T ss_pred CEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC----CCCCCCCCceEECCCC
Confidence 333222 233456889999 999766554 567899999986322211 111100 022 457789999999
Q ss_pred ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 239 RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 239 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
+++++...++.|.+||..++. .+..+..+...+.+++|+|+|+.|..+
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~------------~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQ------------PKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBS------------CSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCc------------EeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 998888788899999976442 234444556778999999999955444
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=4.2e-12 Score=102.37 Aligned_cols=203 Identities=7% Similarity=-0.020 Sum_probs=139.2
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------CC-----CCc
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------DS-----KQL 100 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~-----~~~ 100 (312)
||+.+++.+.++.. ......++++++ ++.+++...++.|.+||..+++......... .+ ++.
T Consensus 69 iD~~t~~~~~~i~~-~~~p~~i~~~~~------g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~ 141 (328)
T 3dsm_A 69 IDINTFKEVGRITG-FTSPRYIHFLSD------EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGK 141 (328)
T ss_dssp EETTTCCEEEEEEC-CSSEEEEEEEET------TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETT
T ss_pred EECcccEEEEEcCC-CCCCcEEEEeCC------CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECC
Confidence 78999999998863 467899999988 7666666578999999998876532111111 11 223
Q ss_pred eEEEEe--CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC----------CeEEE-ecccC
Q psy15191 101 HLLSCS--MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ----------GSLHL-DVTTW 167 (312)
Q Consensus 101 ~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~-d~~~~ 167 (312)
.++++. .++.|.++|+.+.+ ....... ...+..++++|+|++++++..+ +.|.+ |..+.
T Consensus 142 ~lyv~~~~~~~~v~viD~~t~~--~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTETDK--VVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp EEEEEECTTCCEEEEEETTTTE--EEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred EEEEEcCCCCCEEEEEECCCCe--EEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence 444444 48899999998844 3333321 1234678999999977776554 67777 98888
Q ss_pred ceeeeeccc-CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEe-
Q psy15191 168 KQIQTLPCH-QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTI- 244 (312)
Q Consensus 168 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~- 244 (312)
++...+... ......++++|++++|+++.. .|.+||..+.+........ ........++++| ++.++++.
T Consensus 214 ~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~-----~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 214 TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLE-----FRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBC-----CCSSCEEEEEECTTTCCEEEEEC
T ss_pred eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeec-----CCCCceEEEEEcCCCCeEEEEcc
Confidence 877665422 246889999999998888755 8999999876542100000 0134578899999 56666666
Q ss_pred ---ccCCeEEEEecC
Q psy15191 245 ---SRDGVCVVWGLG 256 (312)
Q Consensus 245 ---~~dg~i~iwd~~ 256 (312)
..++.|.+||..
T Consensus 287 ~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 287 IDYQQQGIVYRYSPQ 301 (328)
T ss_dssp TTSSSEEEEEEECTT
T ss_pred cccccCCEEEEECCC
Confidence 578899999987
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=3.7e-12 Score=101.22 Aligned_cols=199 Identities=10% Similarity=0.000 Sum_probs=132.0
Q ss_pred EEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc------------cccccCCCC
Q psy15191 31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL------------PYHMRDDSK 98 (312)
Q Consensus 31 ~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~------------~~~~~~~~~ 98 (312)
.|+++++ ...+..+...+.+++++|+ |+++++...++.|.+||..+++... +......++
T Consensus 54 ~~~~~~~--~~~~~~~~~~~~~l~~~~d------g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 54 AWSDDGQ--LSPEMHPSHHQNGHCLNKQ------GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp EEETTSC--EEEEESSCSSEEEEEECTT------CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred EEECCCC--eEEEECCCCCcceeeECCC------CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 3677666 5667677788999999998 8888888778899999987765421 112334567
Q ss_pred CceEEE----Ee-------------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEE
Q psy15191 99 QLHLLS----CS-------------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH 161 (312)
Q Consensus 99 ~~~l~~----~~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 161 (312)
+.++++ ++ ..+.|..++.. ++. ... ..+...+..++|+|+++.+++...++.|.
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~~~-----~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL---SAP-----IRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE---EEE-----ECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCE---EEe-----ecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 766666 22 12345555544 211 111 13344568899999999986667778888
Q ss_pred E-ecc-cCce---eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEE-c
Q psy15191 162 L-DVT-TWKQ---IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW-S 235 (312)
Q Consensus 162 ~-d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 235 (312)
+ ++. +..+ ...+..+...+..++++++|+++++. ++.|.+||.. ++.+..+.. +.. +++++| +
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~-------~~~-~~~~~f~~ 265 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT-------PQT-TSNLCFGG 265 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC-------SSC-CCEEEEES
T ss_pred EEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC-------CCC-ceeEEEEC
Confidence 7 554 3333 22222345567789999999866655 8899999987 556555554 334 788999 5
Q ss_pred CCCceEEEeccCCeEEEEecCCC
Q psy15191 236 HDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 236 ~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
|+++.|+.++.++ +.-++..+.
T Consensus 266 ~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 266 PEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp TTSCEEEEEETTE-EEEEECSCC
T ss_pred CCCCEEEEEcCCe-EEEEEcccc
Confidence 8998888887764 545555443
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=7.3e-11 Score=93.75 Aligned_cols=228 Identities=11% Similarity=0.001 Sum_probs=143.5
Q ss_pred ccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCC
Q psy15191 44 TNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPD 117 (312)
Q Consensus 44 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 117 (312)
..+..-..+..|+|+ ++.++++...++.|..||..++... .+......+++.+++ +. ++.|.+||..
T Consensus 9 ~~~~~~~Egp~w~~~-----~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 9 PENCRCGESPVWEEV-----SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVA-TI-GTKFCALNWK 81 (297)
T ss_dssp CCCCSBEEEEEEETT-----TTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETT
T ss_pred ccCCccccCCeEECC-----CCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEE-EE-CCeEEEEECC
Confidence 334445667888885 2566777777889999998776541 122333456666444 44 5679999988
Q ss_pred CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-----------CeEEE-ecccCceeeeecccCCceeEEEE
Q psy15191 118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-----------GSLHL-DVTTWKQIQTLPCHQLTITQLAF 185 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~ 185 (312)
+++...+... ........+..++++|+|+++++.... +.+.. +.. .+... ........+.++|
T Consensus 82 ~g~~~~~~~~---~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~ 156 (297)
T 3g4e_A 82 EQSAVVLATV---DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDW 156 (297)
T ss_dssp TTEEEEEEEC---CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEE
T ss_pred CCcEEEEEec---CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEE
Confidence 7543322211 111123457899999999976654321 23333 432 22222 2223345688999
Q ss_pred CCCCCEEEE-EecCCeEEEEEcc--CCCeE--EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191 186 SPDDTHLVS-VSRDRRWGLYKRQ--SSGRL--SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 186 ~~~~~~l~~-~~~d~~i~~wd~~--~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
+|+++.|+. .+.++.|.+||+. ++... ..+.... .....+..++++++|++.++...++.|..||..++.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~- 231 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK- 231 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-
Confidence 999987654 4567899999974 33321 1111100 033467889999999988888888899999987653
Q ss_pred CcccccccccceeEEeeccCcceeEEEec-cCCCeEEEEe
Q psy15191 261 EEDLVQNTLWPEVQKLYGHGYEIYSLAAS-HDGTLLASAC 299 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~s 299 (312)
.+..+..+...+++++|. |+++.|..++
T Consensus 232 -----------~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 232 -----------RLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp -----------EEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred -----------EEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 566666676789999998 8887665444
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=5.8e-13 Score=108.30 Aligned_cols=185 Identities=12% Similarity=0.091 Sum_probs=130.2
Q ss_pred cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeee
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR 128 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 128 (312)
+++.+++++. ..++++|+.++ +++|++...+... ..... . .. ... ..
T Consensus 39 ~~nlLais~~------~gll~a~~~~~-l~v~~~~~l~~~~----~~~~~-~---------------~~---~~~--~~- 85 (388)
T 1xip_A 39 SLQNLDISNS------KSLFVAASGSK-AVVGELQLLRDHI----TSDST-P---------------LT---FKW--EK- 85 (388)
T ss_dssp CCBCEEEETT------TTEEEEEETTE-EEEEEHHHHHHHH----HSSSC-C---------------CC---CSE--EE-
T ss_pred cccEEEEcCC------CCEEEEeCCCE-EEEEEhhHhhhhh----ccccc-c---------------cc---ceE--Ee-
Confidence 6888888888 77888888774 5668875443211 00000 0 00 000 01
Q ss_pred ecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191 129 VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207 (312)
Q Consensus 129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 207 (312)
.... |+.++| ++++|+++ .++.|++ |+.+.........|...+.++.+.+.. +++++.||.|.+||+.
T Consensus 86 -----~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 86 -----EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLR 154 (388)
T ss_dssp -----ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETT
T ss_pred -----eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEcc
Confidence 1234 899999 99999998 8899999 766665555566677888888877543 8889999999999999
Q ss_pred CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe------e---c
Q psy15191 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL------Y---G 278 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~---~ 278 (312)
+..... +...|++++|+|+| ++.|..||.+++|+....... ...++ . +
T Consensus 155 ~~~~~~-----------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~----------~k~~I~~Pp~~~~~~~ 211 (388)
T 1xip_A 155 TKSTKQ-----------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME----------KQFEFSLPSELEELPV 211 (388)
T ss_dssp TCCEEE-----------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE----------EEEEECCCHHHHTSCT
T ss_pred CCcccc-----------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc----------ccceecCCcccccccC
Confidence 766542 34469999999999 778899999999987665210 02233 2 3
Q ss_pred cCcceeEEEeccCCCeEEEEec
Q psy15191 279 HGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 279 ~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
|...|.++.|.+++.++++-..
T Consensus 212 ~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 212 EEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp TTSEEEEEEESSSSEEEEEEEC
T ss_pred CCeeEEEEEEecCCeEEEEEcC
Confidence 7788999999999999987654
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=3.6e-11 Score=103.39 Aligned_cols=183 Identities=14% Similarity=0.030 Sum_probs=131.3
Q ss_pred CceEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 137 (312)
+.++++...+++|.++|..+++.. .+.....++++.++++++.++.|.+||+.+.+...+...+. ..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~------G~ 240 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI------GS 240 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC------CS
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec------CC
Confidence 567888888999999999887663 22344568899999999999999999996222333333331 22
Q ss_pred ceeEEEEC----CCCCeEEEeec-CCeEEE-ecccCceeeeecc----------c-CCceeEEEECCCCCEE-EEEecCC
Q psy15191 138 GFYGCKFG----PRGDYIIAHGF-QGSLHL-DVTTWKQIQTLPC----------H-QLTITQLAFSPDDTHL-VSVSRDR 199 (312)
Q Consensus 138 ~v~~~~~~----~~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~----------~-~~~v~~~~~~~~~~~l-~~~~~d~ 199 (312)
....++|+ |+|++++++.. ++.+.+ |..+.+.+..+.. | ...+..+..++++..+ +....+|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 35789999 69999887765 478888 9999888776541 1 1267788888876654 4455679
Q ss_pred eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCC
Q psy15191 200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPP 259 (312)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~ 259 (312)
.|.++|......+...... .......+.|+|++++++++. .++.|.++|+.++.
T Consensus 321 ~v~~vd~~~~~~~~v~~i~------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEIS------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEEETTCSSEEEEEEEE------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred eEEEEecCCCccceeeeee------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 9999999876544333321 223456789999999876654 67899999998763
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=1.8e-10 Score=91.29 Aligned_cols=221 Identities=8% Similarity=-0.061 Sum_probs=146.2
Q ss_pred cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCceEEEEeCCCcEEEEc
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQLHLLSCSMDKSIIVWA 115 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~~l~~~~~d~~i~i~d 115 (312)
.....+.++++.++ ++++++...++.|.+||.. ++... +..+...+++.++++...++.|..+|
T Consensus 17 ~~~~~p~~i~~d~~------g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 17 IPDSGPYGITSSED------GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS 89 (300)
T ss_dssp STTCCEEEEEECTT------SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCCCcceeeECCC------CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence 34567889999888 8888887778899999877 43211 12222345666666666678899998
Q ss_pred CCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCceeEEEECCCCCEEE
Q psy15191 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLTITQLAFSPDDTHLV 193 (312)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~ 193 (312)
.. ++.. ... .......+.++++.++++++++...++.+.. +.. .+.... .......+..++++++++.++
T Consensus 90 ~~-g~~~---~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v 161 (300)
T 2qc5_A 90 KK-GGFT---EYP---LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWF 161 (300)
T ss_dssp TT-SCEE---EEE---CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred CC-CCeE---Eec---CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEE
Confidence 77 3221 111 1123356889999999987777666677766 655 443322 222345788999999999777
Q ss_pred EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCccccccccccee
Q psy15191 194 SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEV 273 (312)
Q Consensus 194 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 273 (312)
+...++.|..+|. +.+... +.... ....+.+++++++++++++....+.|.+|+. .+.. ..
T Consensus 162 ~~~~~~~i~~~~~-~g~~~~-~~~~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-----------~~ 222 (300)
T 2qc5_A 162 TENQNNSIGRITN-TGKLEE-YPLPT-----NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI-----------SE 222 (300)
T ss_dssp EETTTTEEEEECT-TCCEEE-EECSS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-----------EE
T ss_pred EecCCCeEEEECC-CCcEEE-eeCCC-----CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE-----------EE
Confidence 6666789999998 444332 32211 3345789999999988887777888999987 3210 11
Q ss_pred EEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 274 QKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 274 ~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
..+..+...+.+++++++|+++++..
T Consensus 223 ~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 223 YDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EECCCCCCCceEEEECCCCCEEEecc
Confidence 12223456688999999998777763
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.5e-11 Score=96.49 Aligned_cols=180 Identities=11% Similarity=0.053 Sum_probs=127.6
Q ss_pred CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc
Q psy15191 98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH 176 (312)
Q Consensus 98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~ 176 (312)
.+..|++++.++.|.+||.++++..+.... +....+.++.+.|+|+++++ .++.+.. |. +.+.+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~------~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL------EKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC------CTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC------CccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC
Confidence 346899999999999999988654443321 11135788999999998883 3555666 77 67777777654
Q ss_pred -CCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 177 -QLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 177 -~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
...+.++.+.|+|+++++.+. ++.+..+|. +++.+..+........ +......+++.++|+++++...++.|..||
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~-~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIER-PHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSS-GGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCc-ccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 357889999999999999887 778888886 4666555543221111 222345667899999999999999999999
Q ss_pred cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
.. +. .+.++..+ ..+.++...++|+++++++.++
T Consensus 153 ~~-G~------------~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 153 PN-GQ------------LLNSVKLS-GTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp TT-SC------------EEEEEECS-SCCCEEEECTTSCEEEECBTTS
T ss_pred CC-CC------------EEEEEECC-CCccceeEcCCCCEEEEeCCCC
Confidence 87 52 44444433 3456778889999888885443
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=2.3e-11 Score=99.32 Aligned_cols=216 Identities=7% Similarity=-0.017 Sum_probs=138.2
Q ss_pred CCceEeCCCCeEEEEeccC-CCceEEEEEeCCCCceEEE-EccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeee
Q psy15191 5 PGDVVNGEGGKVLYTLTNH-KSKVMAVKWNGEGGKVLYT-LTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY 82 (312)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~h-~~~v~~~~w~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~ 82 (312)
|..+.-..+|+.++..... .+.| ..|+..+++.+.. +.. . ....+.+.|+ + ...+++.+.||.+.+|++
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v--~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~----~-~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSI--GIVDVAKGDYVEDVTAA-A-GCWSVIPQPN----R-PRSFMTICGDGGLLTINL 180 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEE--EEEETTTTEEEEEEGGG-T-TEEEEEECTT----S-SSEEEEEETTSSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeE--EEEECCCCcEEEEEecC-C-CcceeEEcCC----C-CeeEEEECCCCcEEEEEE
Confidence 4455555566666665432 2333 2267777777766 542 2 2233456665 1 257788888999999988
Q ss_pred cC-Cccc-------------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecc-----cCCCccceeEEE
Q psy15191 83 VS-EGNY-------------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGE-----VGGNTLGFYGCK 143 (312)
Q Consensus 83 ~~-~~~~-------------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~ 143 (312)
.. ++.. ...+....+++..++..+.++.|.++|+............... ..........++
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 65 3222 0011112234456666778899999998764433222211100 000011122378
Q ss_pred ECCCCCeEEEeec-----------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCC--
Q psy15191 144 FGPRGDYIIAHGF-----------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS-- 209 (312)
Q Consensus 144 ~~~~~~~l~~~~~-----------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~-- 209 (312)
|+|+++.++++.. .+.|.+ |..+.+.+..+..+. +..++|+|||++|++++. +.|.+||..+.
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 9999888887654 346777 999999998888665 999999999999998886 99999999988
Q ss_pred CeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191 210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSR 239 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (312)
+.+..+.. .......++++|+|+
T Consensus 338 ~~~~~i~~-------~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 KLLRTIEG-------AAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEEETT-------SCSSEEEEEECCCSC
T ss_pred eeeEEecc-------CCCCcEEEEecCCCC
Confidence 66665532 445567899999985
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.49 E-value=3.7e-10 Score=92.42 Aligned_cols=263 Identities=11% Similarity=0.013 Sum_probs=157.6
Q ss_pred CCCeEEEEecc-CCCce-EEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEE
Q psy15191 12 EGGKVLYTLTN-HKSKV-MAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAIL 79 (312)
Q Consensus 12 ~~~~~~~~~~~-h~~~v-~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~v 79 (312)
..++.++.... ....+ ....+|+.+++.+.++.....+ .++++|+ +++++.+. .++.|.+
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spD------g~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHS------GSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCC------CCEEEEEeccccccccCCCCCeEEE
Confidence 45667777664 33322 3344888999999888765444 8899988 88888775 3678999
Q ss_pred eeecCCcccc---------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeee-eeecccCCCccceeE
Q psy15191 80 WKYVSEGNYL---------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLET-ARVGEVGGNTLGFYG 141 (312)
Q Consensus 80 w~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~v~~ 141 (312)
+|..+.+... ......++++.+|+++.. ++.|.++| .+.+. ... ... . .+
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~---~------~~ 169 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS---P------TC 169 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC---C------ce
Confidence 9998765432 112345788888888764 47899999 87442 222 221 1 11
Q ss_pred EEECCCC-CeEEEeecCCeEEE-ecccCceeeeec-----ccCCc-eeEEEECCCCCEEEEEecCCeEEEEEccCCCeE-
Q psy15191 142 CKFGPRG-DYIIAHGFQGSLHL-DVTTWKQIQTLP-----CHQLT-ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL- 212 (312)
Q Consensus 142 ~~~~~~~-~~l~~~~~~~~i~~-d~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~- 212 (312)
+.+.|++ +.+++.+.||.+.+ |. +.+...... ....+ .....+.+++..++..+..+.+.+.|+......
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence 3344544 33455556666665 66 555542211 11111 123456666665555557889999998754322
Q ss_pred -EEEeccCC---CCcccceeeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeec
Q psy15191 213 -SLVACSDK---TNGVHKRIIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG 278 (312)
Q Consensus 213 -~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 278 (312)
..+..... ...........++++|+++.++.+.. .+.|.++|+.+.. .+..+..
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~------------vv~~i~~ 316 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ------------TSSQISL 316 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE------------EEEEEEC
Confidence 11111000 00001222344788999987776543 3579999988763 4455543
Q ss_pred cCcceeEEEeccCCC-eEEEEecCCCcccceEEeC
Q psy15191 279 HGYEIYSLAASHDGT-LLASACKATKPEHAAIIIW 312 (312)
Q Consensus 279 ~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~iW 312 (312)
.....+++|+|||+ +++++.. .++.|.++
T Consensus 317 -g~~p~~i~~s~Dg~~~l~v~~~----~~~~V~Vi 346 (373)
T 2mad_H 317 -GHDVDAISVAQDGGPDLYALSA----GTEVLHIY 346 (373)
T ss_pred -CCCcCeEEECCCCCeEEEEEcC----CCCeEEEE
Confidence 33578999999999 6777642 24447654
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.49 E-value=9.6e-10 Score=87.10 Aligned_cols=232 Identities=10% Similarity=-0.030 Sum_probs=148.4
Q ss_pred EeCCCCceEE-EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---------ccccccCCCCCce
Q psy15191 32 WNGEGGKVLY-TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---------LPYHMRDDSKQLH 101 (312)
Q Consensus 32 w~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---------~~~~~~~~~~~~~ 101 (312)
|++. ++... .+..+...+..+++.++ +.++++...++.|..+|.. ++.. .+..+...+++.+
T Consensus 46 ~~~~-~~~~~~~~~~~~~~~~~i~~~~~------g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l 117 (300)
T 2qc5_A 46 LDQS-GRIKEFEVPTPDAKVMCLIVSSL------GDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDI 117 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTT------SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred ECCC-CceEEEECCCCCCcceeEEECCC------CCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCE
Confidence 5665 44332 22333467889998887 8888877777889999876 4321 1112223456666
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee-ecccCCc
Q psy15191 102 LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT-LPCHQLT 179 (312)
Q Consensus 102 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~-~~~~~~~ 179 (312)
+++...++.|..++.. .+.. ... .......+..+++.++++.+++...++.|.. +. +.+.... ...+...
T Consensus 118 ~v~~~~~~~i~~~~~~-g~~~---~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 189 (300)
T 2qc5_A 118 WFTQLNGDRIGKLTAD-GTIY---EYD---LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAA 189 (300)
T ss_dssp EEEETTTTEEEEECTT-SCEE---EEE---CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCC
T ss_pred EEEccCCCeEEEECCC-CCEE---Ecc---CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCC
Confidence 6666667888888876 3221 111 1223456789999999996666555666766 55 3333321 1233456
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+..++++++++.+++....+.|.+||. +.... .+.... ....+.+++++++|+++++...++.|..||.. +.
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~ 261 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-EYDIPT-----PNARPHAITAGKNSEIWFTEWGANQIGRITND-NT 261 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-----TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred cceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-EEECCC-----CCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc
Confidence 889999999987777666788999998 33332 222211 33457899999999988877778899999873 21
Q ss_pred CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
. ....+......+.++++.++|+++++.
T Consensus 262 ~-----------~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 262 I-----------QEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp E-----------EEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred E-----------EEEECCccCCccceeEeCCCCCEEEEc
Confidence 0 111223334568899999999977766
No 203
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=1.1e-11 Score=110.50 Aligned_cols=187 Identities=10% Similarity=-0.026 Sum_probs=122.1
Q ss_pred ccccCCCCCceEEEEeCCC-----cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe------
Q psy15191 91 YHMRDDSKQLHLLSCSMDK-----SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS------ 159 (312)
Q Consensus 91 ~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------ 159 (312)
....++|++.+|+.+..++ .|++||+.+++..... .. ...+..++|+|||+.|+.+..++.
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~-------~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LE-------RVKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EE-------EECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-cc-------CcccceEEEEeCCCEEEEEEECCccccccc
Confidence 3445688888888766543 8999999985533211 11 112567999999999998887654
Q ss_pred ----------EEE-ecccCcee----eeecccCCceeEEEECCCCCEEEEEec-----CCeEEEEEccC------CC-eE
Q psy15191 160 ----------LHL-DVTTWKQI----QTLPCHQLTITQLAFSPDDTHLVSVSR-----DRRWGLYKRQS------SG-RL 212 (312)
Q Consensus 160 ----------i~~-d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~------~~-~~ 212 (312)
|++ ++.+.... .....+...+..+.|+|||++|+..+. +..|++||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 777 66554421 122234556789999999999988765 56899999986 32 34
Q ss_pred EEEeccCCCCcccceeeEEEEEcCCCceEEEeccC----CeEEEEecCCCCCCcccccccccceeEEeeccCc--ceeEE
Q psy15191 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY--EIYSL 286 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~ 286 (312)
..+.. +...+.. .|+|+|+.|+..+.+ +.|.+||+..+... ....+..|.. .+.++
T Consensus 280 ~~l~~-------~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----------~~~~l~~~~~~~~~~~~ 341 (710)
T 2xdw_A 280 VKLID-------NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES----------KWKVLVPEHEKDVLEWV 341 (710)
T ss_dssp EEEEC-------SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEEEECCCSSCEEEEE
T ss_pred EEeeC-------CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------cceeccCCCCCCeEEEE
Confidence 44443 2222333 478888877765543 36999998765310 1233444433 68889
Q ss_pred EeccCCCeEEEEecCCC
Q psy15191 287 AASHDGTLLASACKATK 303 (312)
Q Consensus 287 ~~s~~~~~l~s~s~d~~ 303 (312)
+|++++.++++...|+.
T Consensus 342 ~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 342 ACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EEETTTEEEEEEEETTE
T ss_pred EEEcCCEEEEEEEECCE
Confidence 99988888888855543
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=6e-11 Score=94.61 Aligned_cols=230 Identities=11% Similarity=-0.007 Sum_probs=142.3
Q ss_pred ceEEEEccccCcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeecCCccc-------ccccccCCCCCceEEEEeCCC
Q psy15191 38 KVLYTLTNHKSKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCSMDK 109 (312)
Q Consensus 38 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~ 109 (312)
..+..+...........|+|+ ++ ++++...++.|..|+.. ++.. .+.....++++.++++...++
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~------g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEA------QRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRR 107 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGG------GTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTT
T ss_pred CceEEEecCCcCccCCeEeCC------CCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCC
Confidence 344555555667889999998 77 67787788999999874 3321 122233456776555555567
Q ss_pred cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE----eec-------------CCeEEE-ecccCceee
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA----HGF-------------QGSLHL-DVTTWKQIQ 171 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~~-d~~~~~~~~ 171 (312)
.|.+|+.. ++...+.... .......+..++++|+|+++++ |.. .+.|.. |..+.+...
T Consensus 108 ~v~~~~~~-g~~~~~~~~~---~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRY---AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp EEEEECTT-SCEEEEECEE---TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred EEEEECCC-CCEEEEEecc---CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 89999875 3222111111 0011234678999999998876 321 234444 665555443
Q ss_pred eecccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec
Q psy15191 172 TLPCHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
.. .......++|+||++.|+.+... +.|.+|++.... +......... ....+..++++++|++.++.
T Consensus 184 ~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~---~~~~pdgi~~d~~G~lwv~~- 256 (305)
T 3dr2_A 184 MA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV---PDGLPDGFCVDRGGWLWSSS- 256 (305)
T ss_dssp EE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC---SSSCCCSEEECTTSCEEECC-
T ss_pred Ee--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC---CCCCCCeEEECCCCCEEEec-
Confidence 32 33456789999999988777665 789999987543 2111110000 12234568999999965544
Q ss_pred cCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 246 RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 246 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
.+ .|.+|+.... .+..+..+. .+.+++|+|+++.|..++.
T Consensus 257 ~~-gv~~~~~~g~-------------~~~~~~~~~-~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 257 GT-GVCVFDSDGQ-------------LLGHIPTPG-TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp SS-EEEEECTTSC-------------EEEEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred CC-cEEEECCCCC-------------EEEEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence 44 4999987432 445554444 5889999999987877743
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=2.9e-10 Score=91.51 Aligned_cols=221 Identities=13% Similarity=0.008 Sum_probs=136.4
Q ss_pred cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcce
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL 122 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 122 (312)
-..+..|+|+ ++.++++...++.|..||..+++.. .+......+++.++++ +.+ .|.+||..+++..
T Consensus 50 ~~egp~~~~~-----~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPA-----SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETT-----TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE
T ss_pred CCcCCeEeCC-----CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEE
Confidence 4567889886 2456677777889999998776532 1222333455655554 444 4899998775432
Q ss_pred eeeeeeecccCCCccceeEEEECCCCCeEEEeec------CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191 123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF------QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV 195 (312)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (312)
.+... ........+.+++++|+|+++++... .+.+.. + +.+... +.........++|+|+++.++.+
T Consensus 123 ~~~~~---~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 123 LHAEL---ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEECS---STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEE
T ss_pred EEeeC---CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEE
Confidence 22111 00112346889999999997665432 234444 5 333322 22233456789999999876554
Q ss_pred -ecCCeEEEEEcc--CC-Ce--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccc
Q psy15191 196 -SRDRRWGLYKRQ--SS-GR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL 269 (312)
Q Consensus 196 -~~d~~i~~wd~~--~~-~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 269 (312)
+.++.|.+||+. ++ .. ...+..... ....+..++++++|.++++...++.|.+||.. +.
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~----~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~---------- 261 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTG----IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN---------- 261 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTT----SSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC----------
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCC----CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC----------
Confidence 457899999986 33 21 111211100 23346789999999988877677889999873 31
Q ss_pred cceeEEeeccCcceeEEEec-cCCCeEEEEe
Q psy15191 270 WPEVQKLYGHGYEIYSLAAS-HDGTLLASAC 299 (312)
Q Consensus 270 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~s 299 (312)
.+..+..+...+++++|+ ++++.|..++
T Consensus 262 --~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 262 --HIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp --EEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred --EEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 455555666679999998 8887665444
No 206
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.42 E-value=2.3e-11 Score=108.09 Aligned_cols=191 Identities=10% Similarity=0.001 Sum_probs=119.1
Q ss_pred cccccCCCCCceEE-----EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe-----
Q psy15191 90 PYHMRDDSKQLHLL-----SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS----- 159 (312)
Q Consensus 90 ~~~~~~~~~~~~l~-----~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----- 159 (312)
+....++|++.+|+ .|+.+..|++||+.+++... . . ..... ....++|+|||+.|+.++.+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~-~---~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-V-D---VIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-S-C---CBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-C-c---ccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence 33456688998888 34445689999999855320 0 0 11111 1257899999999998887664
Q ss_pred --------EEE-ecccCc----eeeeecccCCceeEEEECCCCCEEEEEecCC----eEEEEEccCCCeEEEEeccCCCC
Q psy15191 160 --------LHL-DVTTWK----QIQTLPCHQLTITQLAFSPDDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSDKTN 222 (312)
Q Consensus 160 --------i~~-d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~ 222 (312)
|++ ++.+.. ++.....+...+..+.|+|||++|+..+.++ .|+++|..+.... .+..
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~----- 269 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVK----- 269 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEE-----
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eeec-----
Confidence 777 665544 2222234556788999999999998887666 6777765544333 3332
Q ss_pred cccceeeEEEEEcCCCceEEEec---cCCeEEEEecCCCCCCcccccccccceeEEeecc--CcceeEEEeccCCCeEEE
Q psy15191 223 GVHKRIIWGVAWSHDSRYFLTIS---RDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH--GYEIYSLAASHDGTLLAS 297 (312)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s 297 (312)
+...+....+ ++|.+++.+. .++.|.+||+..+... . ...+..+ ...+.+++|+ ++.++++
T Consensus 270 --~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-------~---~~~l~~~~~~~~l~~~~~~-~~~lv~~ 335 (695)
T 2bkl_A 270 --GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA-------S---WKEIVPEDSSASLLSVSIV-GGHLSLE 335 (695)
T ss_dssp --CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG-------G---CEEEECCCSSCEEEEEEEE-TTEEEEE
T ss_pred --CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc-------C---CeEEecCCCCCeEEEEEEE-CCEEEEE
Confidence 2333445556 5666444444 2578999998765210 1 1233333 4567888988 7778888
Q ss_pred EecCCCcccceEEeC
Q psy15191 298 ACKATKPEHAAIIIW 312 (312)
Q Consensus 298 ~s~d~~~~dg~i~iW 312 (312)
...|+ ..+||
T Consensus 336 ~~~dg-----~~~l~ 345 (695)
T 2bkl_A 336 YLKDA-----TSEVR 345 (695)
T ss_dssp EEETT-----EEEEE
T ss_pred EEECC-----EEEEE
Confidence 85444 46665
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=9.2e-12 Score=101.29 Aligned_cols=139 Identities=6% Similarity=0.026 Sum_probs=103.2
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEEecccCc---------eee-eecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWK---------QIQ-TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 207 (312)
++..+++++...++++|+.++.+..++.+.+ ... ....+.. |+.++| |+++|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 5888999999999999999876666333222 111 1223566 999999 99999998 88999999998
Q ss_pred CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEE
Q psy15191 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLA 287 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 287 (312)
+......... +...+.++.+.+.. +++++.||.|.+||+..+. .. . +...|++++
T Consensus 115 sl~~~~~~~~-------~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~------------~~-~---~~~~Vs~v~ 169 (388)
T 1xip_A 115 ELSEFRTVTS-------FEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKS------------TK-Q---LAQNVTSFD 169 (388)
T ss_dssp STTCEEEEEE-------CSSCEEEEEECSSE--EEEEETTSEEEEEETTTCC------------EE-E---EEESEEEEE
T ss_pred hhhccCccce-------eecceeeEEecCCC--EEEEECCCCEEEEEccCCc------------cc-c---ccCCceEEE
Confidence 8775554443 55567777776543 8888999999999998763 11 1 456899999
Q ss_pred eccCCCeEEEEecCCCcccceEEeC
Q psy15191 288 ASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 288 ~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
|||+| ++.|..|++ |++|
T Consensus 170 WSpkG--~~vg~~dg~-----i~~~ 187 (388)
T 1xip_A 170 VTNSQ--LAVLLKDRS-----FQSF 187 (388)
T ss_dssp ECSSE--EEEEETTSC-----EEEE
T ss_pred EcCCc--eEEEEcCCc-----EEEE
Confidence 99999 677865555 8765
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=3.4e-10 Score=91.83 Aligned_cols=225 Identities=10% Similarity=0.041 Sum_probs=136.4
Q ss_pred CcEEEEEEecCcCcCCCCceEEEec--CCCcEEEeeecCCccc--------------ccccccCCCCCceEEEEeC----
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCS--LDKTAILWKYVSEGNY--------------LPYHMRDDSKQLHLLSCSM---- 107 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~--~dg~i~vw~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~---- 107 (312)
..+..++++++ |+++++.. .++.++||.+.++... .+..+..++++.++++-..
T Consensus 17 ~~p~~va~~~~------g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPD------GRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTT------SCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT
T ss_pred CCcceEEECCC------CCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC
Confidence 67889999888 88888864 2343566665433221 1222233455554444333
Q ss_pred -CCcEEEEcCCCCcceeeeeeeec-ccCCCccceeEEEECCCCCeE-EEee---cCCeEEE-ecccCceeeeeccc----
Q psy15191 108 -DKSIIVWAPDPTTGLWLETARVG-EVGGNTLGFYGCKFGPRGDYI-IAHG---FQGSLHL-DVTTWKQIQTLPCH---- 176 (312)
Q Consensus 108 -d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~---~~~~i~~-d~~~~~~~~~~~~~---- 176 (312)
++.|.+||+.+++ .+...... ....+...+..+++++++..+ ++.. .++.|.+ |..+.+....+..|
T Consensus 91 ~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp SCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 5789999998744 22222221 111233456889999865554 4433 4667766 77666554433221
Q ss_pred -------------------------CCceeEEEECCCCCEEEEEecCC-eEEEEEccCCC--e---------EEEEeccC
Q psy15191 177 -------------------------QLTITQLAFSPDDTHLVSVSRDR-RWGLYKRQSSG--R---------LSLVACSD 219 (312)
Q Consensus 177 -------------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~--~---------~~~~~~~~ 219 (312)
...+..|+|+|+++.|+.+..++ .+..++..... . +....
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--- 245 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS--- 245 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE---
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc---
Confidence 12368899999999888887665 55555542110 0 01110
Q ss_pred CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEE
Q psy15191 220 KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLAS 297 (312)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s 297 (312)
+......++++++|.++++...++.|.+||...+ .+..+.. +...+.+++|.++|+++++
T Consensus 246 -----~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-------------~~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 246 -----EKPICDGISIDKDHNIYVGDLAHSAIGVITSADR-------------AYKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp -----ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-------------EEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred -----cCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-------------CEEEEEECCceecCCeeEECCCCcEEEE
Confidence 2224557999999999999999999999998443 1222221 2456889999999998888
Q ss_pred EecC
Q psy15191 298 ACKA 301 (312)
Q Consensus 298 ~s~d 301 (312)
.+..
T Consensus 308 ~~~~ 311 (343)
T 2qe8_A 308 CNQL 311 (343)
T ss_dssp ECCG
T ss_pred eCcc
Confidence 8643
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.41 E-value=3.5e-09 Score=86.65 Aligned_cols=211 Identities=7% Similarity=-0.043 Sum_probs=130.8
Q ss_pred EeCCCCceEEEEccc-------cCcEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCccccc-ccccC-----C
Q psy15191 32 WNGEGGKVLYTLTNH-------KSKVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLP-YHMRD-----D 96 (312)
Q Consensus 32 w~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~-~~~~~-----~ 96 (312)
||+.+++.+.++.-. ......+.|+|+ |++|+.+.. ++.|.++| .+++.... .-.+. .
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD------G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~ 174 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN------NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHP 174 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCC------CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEe
Confidence 566666666665421 123446788887 999988764 47899999 88776433 22211 1
Q ss_pred CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc--eeeee
Q psy15191 97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTL 173 (312)
Q Consensus 97 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~ 173 (312)
.....+++.+.||.+.++|. +.+........ ....+.........+.+++..++..+..+.+.+ |..+.. ....+
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVG-AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEecc-ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 12235667778999999999 64433111100 000111111223456666655554456777776 664332 11221
Q ss_pred cc----------cCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEE
Q psy15191 174 PC----------HQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA 233 (312)
Q Consensus 174 ~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 233 (312)
.- .......+.++|+++.++.+.. ++.|.++|+.+.+.+..+.. .....+++
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--------g~~p~~i~ 324 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--------GHDVDAIS 324 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--------CCCcCeEE
Confidence 10 1223445789999998887653 35799999999888877763 33467899
Q ss_pred EcCCCc-eEEEec-cCCeEEEEecCCCC
Q psy15191 234 WSHDSR-YFLTIS-RDGVCVVWGLGEPP 259 (312)
Q Consensus 234 ~~~~~~-~l~s~~-~dg~i~iwd~~~~~ 259 (312)
|+|||+ +++++. .++.|.++|+.+..
T Consensus 325 ~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 325 VAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 999999 777777 58999999998874
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.40 E-value=1.3e-10 Score=103.08 Aligned_cols=222 Identities=11% Similarity=0.039 Sum_probs=138.1
Q ss_pred cccCcEEEEEEecCcCcCCCCceEE-----EecCCCcEEEeeecCCcccc-------cccccCCCCCceEEEEeCCCc--
Q psy15191 45 NHKSKVMAVKWVLNTSLDPEHKDLV-----SCSLDKTAILWKYVSEGNYL-------PYHMRDDSKQLHLLSCSMDKS-- 110 (312)
Q Consensus 45 ~h~~~v~~~~~~~~~~~~~~~~~l~-----s~~~dg~i~vw~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~-- 110 (312)
+|...+..++|+|+ |++|| .|+.+..|++||+.+++... .....++ ++..|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpD------g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSRD------GRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECTT------SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCcEEEEEEEECCC------CCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccc
Confidence 35567888999998 99888 34444689999999987532 1233456 7777888777643
Q ss_pred -----------EEEEcCCCCcceeeeeeeecccCC-CccceeEEEECCCCCeEEEeec----CCeEEE-ecccCc-eeee
Q psy15191 111 -----------IIVWAPDPTTGLWLETARVGEVGG-NTLGFYGCKFGPRGDYIIAHGF----QGSLHL-DVTTWK-QIQT 172 (312)
Q Consensus 111 -----------i~i~d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----~~~i~~-d~~~~~-~~~~ 172 (312)
|++|++.+......... .... +...+..+.|+|+|++|+.... ...+.+ |+.+.+ ....
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred ccccccCCCcEEEEEECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 89999887543211111 1112 3344678899999998865443 246777 765543 2233
Q ss_pred ecccCCceeEEEECCCCCEEEEEe-cC---CeEEEEEccCCCe--EEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191 173 LPCHQLTITQLAFSPDDTHLVSVS-RD---RRWGLYKRQSSGR--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~-~d---~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
+..+....... +++++..|+..+ .+ +.|..+|+.+... ...+.. +...+. .|++++++|+....
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-------~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-------ERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-------CCSSCE--EEEEETTEEEEEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-------CCCCEE--EEEEECCEEEEEEE
Confidence 44454544444 566666555444 33 6799999987654 233332 323333 78899988877664
Q ss_pred -CC--eEEEEecCCCCCCcccccccccceeEEee-ccCcceeEEEeccCCCeEEEEe
Q psy15191 247 -DG--VCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 247 -dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~s 299 (312)
++ .|++|++... ....+. ...+.+..+.++++++.|+...
T Consensus 346 ~~g~~~l~~~d~~g~-------------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 346 VDATARVEQFDYEGK-------------RVREVALPGLGSVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp ETTEEEEEEECTTSC-------------EEEEECCSSSSEEEECCCCTTCSCEEEEE
T ss_pred ECCeeEEEEEECCCC-------------eeEEeecCCCceEEeeecCCCCCEEEEEe
Confidence 44 6888887643 233332 2345677788888887666553
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.40 E-value=1.5e-09 Score=86.72 Aligned_cols=205 Identities=10% Similarity=0.010 Sum_probs=127.4
Q ss_pred EEeCCCCceEEEEc----cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc-------------ccc
Q psy15191 31 KWNGEGGKVLYTLT----NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP-------------YHM 93 (312)
Q Consensus 31 ~w~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~-------------~~~ 93 (312)
.|++.+++...... ++...+.++++.++ +++++++.. .+.|.+||.+ ++.... ..+
T Consensus 50 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~-----~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i 122 (314)
T 1pjx_A 50 RIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD-----ANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC 122 (314)
T ss_dssp EECTTTCCEEEEECCEETTEECCEEEEEECSS-----SSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEE
T ss_pred EEeCCCCcEEEEEecccCCCCCCCceEEEecC-----CCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCE
Confidence 37777776543322 25567889988775 134444443 4478889876 443211 122
Q ss_pred cCCCCCceEEEEeCC---------------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC----CCCCeEEEe
Q psy15191 94 RDDSKQLHLLSCSMD---------------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG----PRGDYIIAH 154 (312)
Q Consensus 94 ~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~ 154 (312)
...+++.++++...+ +.|..++.. ++.... . ........++++ |+++.++++
T Consensus 123 ~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~--~------~~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 123 AFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV--D------TAFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp EECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE--E------EEESSEEEEEEEECTTSCEEEEEEE
T ss_pred EECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe--c------cCCCCcceEEEecccCCCCCEEEEE
Confidence 234566666665544 456667654 221111 1 112345788999 999766555
Q ss_pred -ecCCeEEE-ecc-cCce-----eeeecccC-CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCccc
Q psy15191 155 -GFQGSLHL-DVT-TWKQ-----IQTLPCHQ-LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVH 225 (312)
Q Consensus 155 -~~~~~i~~-d~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 225 (312)
..++.|.+ +.. +... ...+..+. ..+..++++++|+++++...++.|.+||..+.+....+.. +
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-------~ 266 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-------P 266 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-------S
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-------C
Confidence 45677777 544 2221 11222333 5678899999999888877889999999885555544443 3
Q ss_pred ceeeEEEEEcCCCc-eEEEeccCCeEEEEecCCC
Q psy15191 226 KRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 226 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~ 258 (312)
...+.+++++|+++ ++++...++.|..|++...
T Consensus 267 ~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 35688999999999 4555566789999998654
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.39 E-value=4.3e-10 Score=91.18 Aligned_cols=229 Identities=10% Similarity=0.011 Sum_probs=144.8
Q ss_pred EeCCCCceEEEEcccc-------CcEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCccccccccc-----CCC
Q psy15191 32 WNGEGGKVLYTLTNHK-------SKVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLPYHMR-----DDS 97 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~~~-----~~~ 97 (312)
||+.+++.+.++.-.. .....++|+|+ |++++.+.. ++.|.++|+.+.+.....-.+ ...
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD------Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~ 187 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD------GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT 187 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT------SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCC------CCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecC
Confidence 6777777777664221 23456778887 998877753 689999999998864332211 122
Q ss_pred CCceEEEEeCCCcEEEEcCCC-CcceeeeeeeecccCCCcccee-EEEEC-CCCCeEEEeecCCeEEE-ecccCc--eee
Q psy15191 98 KQLHLLSCSMDKSIIVWAPDP-TTGLWLETARVGEVGGNTLGFY-GCKFG-PRGDYIIAHGFQGSLHL-DVTTWK--QIQ 171 (312)
Q Consensus 98 ~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~~~~~~~~i~~-d~~~~~--~~~ 171 (312)
....+++.+.||.+.+.++.+ ++.. .... ..+.....++. ...|. ++|++++ .+.+|.+.+ |..+.. ...
T Consensus 188 g~~~~~~~~~DG~~~~v~~~~~g~v~--~~~~-~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 188 APDTFFMHCRDGSLAKVAFGTEGTPE--ITHT-EVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp ETTEEEEEETTSCEEEEECCSSSCCE--EEEC-CCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred CCceeEEECCCCCEEEEECCCCCeEE--Eeec-ceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence 334677888999999999876 3321 1111 11111112222 23553 6776555 555788888 775543 222
Q ss_pred eec----------ccCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEE
Q psy15191 172 TLP----------CHQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWG 231 (312)
Q Consensus 172 ~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~ 231 (312)
... -.......++++|+++.++.... .+.|.+.|+.+.+.+..+. -...+.+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~--------vg~~~~~ 335 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--------MGHEIDS 335 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--------EEEEECE
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE--------CCCCcce
Confidence 221 01233445788999998887653 2579999999999988887 3456889
Q ss_pred EEEcCCCc-eEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191 232 VAWSHDSR-YFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD 291 (312)
Q Consensus 232 ~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 291 (312)
++++||++ +|+++ ..++.|.++|..++. .+.++..- +..+.|.+++|
T Consensus 336 lavs~D~~~~ly~tn~~~~~VsViD~~t~k------------~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 336 INVSQDEKPLLYALSTGDKTLYIHDAESGE------------ELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEECSSSSCEEEEEETTTTEEEEEETTTCC------------EEEEECCC-CSSCCEEEECC
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEECCCCc------------EEEEecCC-CCCceeEECCc
Confidence 99999997 66654 568999999998874 45555432 33355666665
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.37 E-value=1.5e-09 Score=89.52 Aligned_cols=228 Identities=11% Similarity=0.046 Sum_probs=146.0
Q ss_pred CCCeEEEEeccCC----CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcE
Q psy15191 12 EGGKVLYTLTNHK----SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTA 77 (312)
Q Consensus 12 ~~~~~~~~~~~h~----~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i 77 (312)
..++.++...... +.| ..+|+.+++.+.++..-..+ .+.++|+ +++|+.+. .++.|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~V--sVID~~t~~vv~~I~vG~~P--gia~SpD------gk~lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQ--FVIDGSTGRILGMTDGGFLP--HPVAAED------GSFFAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEE--EEEETTTTEEEEEEEECSSC--EEEECTT------SSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeE--EEEECCCCEEEEEEECCCCC--ceEECCC------CCEEEEEeccccccccCCCCCEE
Confidence 3456666665432 233 23789999999999865555 8999998 88877765 46789
Q ss_pred EEeeecCCccccc---------------ccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeeccc----C-C-
Q psy15191 78 ILWKYVSEGNYLP---------------YHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEV----G-G- 134 (312)
Q Consensus 78 ~vw~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~----~-~- 134 (312)
.++|..+.+.... .....++++.+++++.. ++.|.+.|+.+.+. +..++.... + +
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv--v~~I~v~g~~~~~p~g~ 229 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF--DRMLDVPDCYHIFPASP 229 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECCSEEEEEEEET
T ss_pred EEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE--EEEEEcCCceeeccCCC
Confidence 9999988776321 22345788888888764 57899999998543 222322100 0 0
Q ss_pred -----------------Cccce----------------eEEEECCCCCeEEEeecCCeEEE-ecccCcee--eeec----
Q psy15191 135 -----------------NTLGF----------------YGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI--QTLP---- 174 (312)
Q Consensus 135 -----------------~~~~v----------------~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~---- 174 (312)
....+ ..+.+.+++..++.....+.+.+ |....... ..+.
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE 309 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence 00000 01234555555555555566665 54322211 1100
Q ss_pred ------ccCCceeEEEECCCCCEEEEEec----------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 175 ------CHQLTITQLAFSPDDTHLVSVSR----------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 175 ------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
........++++|+++++++... ++.|.+.|+.+.+.+..+.. ......++|+||+
T Consensus 310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--------g~~P~gia~spDg 381 (426)
T 3c75_H 310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--------GHEIDSINVSQDA 381 (426)
T ss_dssp TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--------EEEECEEEECCSS
T ss_pred cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--------CCCcCeEEEccCC
Confidence 01112223789999888777643 35799999999999888873 3457889999999
Q ss_pred c-eEEEec-cCCeEEEEecCCCC
Q psy15191 239 R-YFLTIS-RDGVCVVWGLGEPP 259 (312)
Q Consensus 239 ~-~l~s~~-~dg~i~iwd~~~~~ 259 (312)
+ +++++. .++.|.++|+.+..
T Consensus 382 ~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 382 EPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp SCEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEEcCCCCeEEEEECCCCC
Confidence 9 888777 58999999998874
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.35 E-value=2.2e-09 Score=87.10 Aligned_cols=263 Identities=15% Similarity=0.065 Sum_probs=152.5
Q ss_pred CCCCeEEEEeccC----CCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCc
Q psy15191 11 GEGGKVLYTLTNH----KSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKT 76 (312)
Q Consensus 11 ~~~~~~~~~~~~h----~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~ 76 (312)
...++.++..... .+.| ...|..+++.+.++.....+ . ++++|+ |++++.+. .++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V--~ViD~~t~~v~~~I~vG~~P-~-va~spD------G~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQ--FVIDGEAGRVIGMIDGGFLP-N-PVVADD------GSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEE--EEEETTTTEEEEEEEECSSC-E-EEECTT------SSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEE--EEEECCCCeEEEEEECCCCC-c-EEECCC------CCEEEEEcccccccccCCCCCE
Confidence 3456667666542 3334 23689999999999865555 4 999999 88887665 3678
Q ss_pred EEEeeecCCcccc---------------cccccCCCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccce
Q psy15191 77 AILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGF 139 (312)
Q Consensus 77 i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v 139 (312)
|.+||..+.+... ......++++.+++++.. ++.|.++|+.+.+ .+.+++.. +.
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~--vv~tI~v~---g~---- 181 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA--FKRMLDVP---DC---- 181 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE--EEEEEECC---SE----
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc--EEEEEECC---Cc----
Confidence 9999999887632 222445788888887764 6889999999844 33333321 10
Q ss_pred eEEEECCCCCeEEEeecCCeEEE-eccc-Cceeeeec----ccCCce-eEEEEC-CCCCEEEEEecCCeEEEEEccCCCe
Q psy15191 140 YGCKFGPRGDYIIAHGFQGSLHL-DVTT-WKQIQTLP----CHQLTI-TQLAFS-PDDTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 140 ~~~~~~~~~~~l~~~~~~~~i~~-d~~~-~~~~~~~~----~~~~~v-~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
...+....+.+++.+.||.+.+ ++.+ .+...... .-..++ ....|. ++|++++ .+.+|.+++.|+.+...
T Consensus 182 -~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 182 -YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA 259 (386)
T ss_dssp -EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC
T ss_pred -ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc
Confidence 1112112333444445555444 4433 33211111 111122 123553 6776555 55689999999976543
Q ss_pred E--EEEeccCC---CCcccceeeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEe
Q psy15191 212 L--SLVACSDK---TNGVHKRIIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL 276 (312)
Q Consensus 212 ~--~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 276 (312)
. ..+..... ...........++++|+++.++.... .+.|.++|+.+.. .+..+
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k------------v~~~i 327 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE------------RLAKF 327 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC------------EEEEE
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe------------EEEEE
Confidence 2 11110000 00001222334778999888777643 2479999998874 44444
Q ss_pred eccCcceeEEEeccCCC-eEEEEecCCCcccceEEe
Q psy15191 277 YGHGYEIYSLAASHDGT-LLASACKATKPEHAAIII 311 (312)
Q Consensus 277 ~~~~~~v~~~~~s~~~~-~l~s~s~d~~~~dg~i~i 311 (312)
.. ...+.+|++++|++ +|.++. ..++.|.+
T Consensus 328 ~v-g~~~~~lavs~D~~~~ly~tn----~~~~~VsV 358 (386)
T 3sjl_D 328 EM-GHEIDSINVSQDEKPLLYALS----TGDKTLYI 358 (386)
T ss_dssp EE-EEEECEEEECSSSSCEEEEEE----TTTTEEEE
T ss_pred EC-CCCcceEEECCCCCeEEEEEc----CCCCeEEE
Confidence 32 23688999999997 666553 33444654
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.31 E-value=8.8e-09 Score=85.42 Aligned_cols=227 Identities=7% Similarity=-0.010 Sum_probs=134.9
Q ss_pred CCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCccc-
Q psy15191 12 EGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNY- 88 (312)
Q Consensus 12 ~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~- 88 (312)
..++ ++........| ..|++++++........ .... ++|+++ ++.|+.+..++ .|.+++...+...
T Consensus 140 ~~g~-lyv~d~~~~~I--~~id~~~g~~~~~~~~~-~~~~-ia~~~~------g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 140 GNNT-VLAYQRDDPRV--RLISVDDNKVTTVHPGF-KGGK-PAVTKD------KQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp STTE-EEEEETTTTEE--EEEETTTTEEEEEEETC-CBCB-CEECTT------SSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCCC-EEEEecCCCcE--EEEECCCCEEEEeeccC-CCCc-eeEecC------CCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4455 44443333444 23677766665555442 3333 888888 88888887766 6888887654331
Q ss_pred -----------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc-cee-EEEECCC-CCeEEEe
Q psy15191 89 -----------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL-GFY-GCKFGPR-GDYIIAH 154 (312)
Q Consensus 89 -----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~-~~~l~~~ 154 (312)
.+.....+++...|+.+..++.|+.||..+.......... ..+... ... .++|+|+ +.++++-
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~---~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE---LSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC---CCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc---ccCCCCCCccccEEEeCCCCEEEEEe
Confidence 1122233553345555777889999999875432221111 111111 123 8999995 5555555
Q ss_pred ecCCeEEE-ecccCceeeeeccc---------------CCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEec
Q psy15191 155 GFQGSLHL-DVTTWKQIQTLPCH---------------QLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 155 ~~~~~i~~-d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~ 217 (312)
..++.|+. +... .. ..+.++ -.....++++|+|+++++-. .++.|+.||+.++. +..+.+
T Consensus 286 ~~~~~I~~~~~~g-~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g 362 (409)
T 3hrp_A 286 QNLSSVYKITPDG-EC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAG 362 (409)
T ss_dssp TTTTEEEEECTTC-CE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEE
T ss_pred CCCCEEEEEecCC-CE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeC
Confidence 56677776 4332 11 112111 23478999999999777777 78999999976554 333333
Q ss_pred c-CCCC-------cccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 218 S-DKTN-------GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 218 ~-~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
. .... ...-.....++++|++.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 2 0000 001245789999999988888888899988865
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.30 E-value=9.2e-10 Score=98.56 Aligned_cols=188 Identities=12% Similarity=0.046 Sum_probs=116.0
Q ss_pred cccCCCCCceEEEEeCC-----CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe-------
Q psy15191 92 HMRDDSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS------- 159 (312)
Q Consensus 92 ~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------- 159 (312)
...++|++.+|+.++.+ ..|++||+.+++.... .. +...+..++|+|| +.|+.+..++.
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~---~~-----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD---EL-----KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE---EE-----EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc---cC-----CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 34568899888876654 4699999998654221 10 1112357899999 98888776543
Q ss_pred -------EEE-ecccCce----eeeecccCCceeEEEECCCCCEEEEEecCC-----eEEEEEccCC--CeEEEEeccCC
Q psy15191 160 -------LHL-DVTTWKQ----IQTLPCHQLTITQLAFSPDDTHLVSVSRDR-----RWGLYKRQSS--GRLSLVACSDK 220 (312)
Q Consensus 160 -------i~~-d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~ 220 (312)
|++ ++.+... +.....+...+..+.|+|||++|+..+.++ .|++||+.++ .....+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--- 314 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP--- 314 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---
Confidence 555 5544332 111223334588999999999988877554 8999999876 31333332
Q ss_pred CCcccceeeEEEEEcCCCceEEEecc----CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEE
Q psy15191 221 TNGVHKRIIWGVAWSHDSRYFLTISR----DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA 296 (312)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 296 (312)
+...+... ++|+|+.|+..+. ++.|.+||+..+. . . ....+..+...+.+++|+ ++.+++
T Consensus 315 ----~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~-------~--~~~l~~~~~~~l~~~~~~-~~~lv~ 378 (741)
T 1yr2_A 315 ----DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-P-------R--FDTVVPESKDNLESVGIA-GNRLFA 378 (741)
T ss_dssp ----SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-C-------E--EEEEECCCSSEEEEEEEE-BTEEEE
T ss_pred ----CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-c-------c--cEEEecCCCCeEEEEEEE-CCEEEE
Confidence 22223333 3488888877665 3469999987642 0 0 122233445567778887 667778
Q ss_pred EEecCCCcccceEEeC
Q psy15191 297 SACKATKPEHAAIIIW 312 (312)
Q Consensus 297 s~s~d~~~~dg~i~iW 312 (312)
+...|+ ..+||
T Consensus 379 ~~~~dg-----~~~l~ 389 (741)
T 1yr2_A 379 SYIHDA-----KSQVL 389 (741)
T ss_dssp EEEETT-----EEEEE
T ss_pred EEEECC-----EEEEE
Confidence 885444 36654
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.30 E-value=8.9e-09 Score=81.66 Aligned_cols=213 Identities=10% Similarity=0.023 Sum_probs=130.2
Q ss_pred CceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191 6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE 85 (312)
Q Consensus 6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 85 (312)
..+|+...+..+.. ......| ..|++++++. ..+. ....+.++++.++ ++++++. ++.|.+||..++
T Consensus 17 gp~w~~~~~~l~~~-d~~~~~i--~~~d~~~~~~-~~~~-~~~~~~~i~~~~d------G~l~v~~--~~~l~~~d~~~g 83 (297)
T 3g4e_A 17 SPVWEEVSNSLLFV-DIPAKKV--CRWDSFTKQV-QRVT-MDAPVSSVALRQS------GGYVATI--GTKFCALNWKEQ 83 (297)
T ss_dssp EEEEETTTTEEEEE-ETTTTEE--EEEETTTCCE-EEEE-CSSCEEEEEEBTT------SSEEEEE--TTEEEEEETTTT
T ss_pred CCeEECCCCEEEEE-ECCCCEE--EEEECCCCcE-EEEe-CCCceEEEEECCC------CCEEEEE--CCeEEEEECCCC
Confidence 45788766655543 3344555 3478877665 3333 4568999999988 8855553 567999998776
Q ss_pred ccccc------------ccccCCCCCceEEEEeCC---------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE
Q psy15191 86 GNYLP------------YHMRDDSKQLHLLSCSMD---------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144 (312)
Q Consensus 86 ~~~~~------------~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (312)
+...+ ......+++.++++.... ..-.+|.+..... ..... ........++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~------~~~~~pngi~~ 156 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF------DQVDISNGLDW 156 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE------EEESBEEEEEE
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe------eccccccceEE
Confidence 54211 112235566554443221 2223443332111 11111 11234578999
Q ss_pred CCCCCeEEEe-ecCCeEEE-ec--ccCcee-----eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEE
Q psy15191 145 GPRGDYIIAH-GFQGSLHL-DV--TTWKQI-----QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV 215 (312)
Q Consensus 145 ~~~~~~l~~~-~~~~~i~~-d~--~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 215 (312)
+|+++.|+.+ +.++.|.. +. .+..+. ..+..+......++++++|++.++...++.|..||..+++.+..+
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 9999977554 45677776 54 444332 112233456789999999988887777889999999888877777
Q ss_pred eccCCCCcccceeeEEEEEc-CCCceEEEec
Q psy15191 216 ACSDKTNGVHKRIIWGVAWS-HDSRYFLTIS 245 (312)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~-~~~~~l~s~~ 245 (312)
.. +...+++++|. |+++.|+.++
T Consensus 237 ~~-------p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 237 KL-------PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EC-------SSSBEEEEEEESGGGCEEEEEE
T ss_pred EC-------CCCCceEEEEeCCCCCEEEEEc
Confidence 64 33568999998 8877665444
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=1.5e-08 Score=82.24 Aligned_cols=224 Identities=7% Similarity=-0.079 Sum_probs=136.0
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEec----------CCCcEEEeeecCCccccc-----------
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS----------LDKTAILWKYVSEGNYLP----------- 90 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----------~dg~i~vw~~~~~~~~~~----------- 90 (312)
.|+++++.+.++.....+ .+.++|+ +++++.+. .++.|.+||..+.+....
T Consensus 51 ID~~t~~v~~~i~vG~~P--~i~~spD------g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 51 SCAGCGVTLGHSLGAFLS--LAVAGHS------GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECTT------SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred EECCCCeEEEEEeCCCCC--ceEECCC------CCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence 689999999999865566 7999998 88887775 478899999998876322
Q ss_pred ----ccccCCCCCceEEEEeC--CCcEEE--EcCCCCcceeeeeeeecc----cCC---------CccceeEEE------
Q psy15191 91 ----YHMRDDSKQLHLLSCSM--DKSIIV--WAPDPTTGLWLETARVGE----VGG---------NTLGFYGCK------ 143 (312)
Q Consensus 91 ----~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~~----~~~---------~~~~v~~~~------ 143 (312)
.....++++.+++++.. +..+.+ +|..+ ....+... .+. ..+.+..+.
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 23345778888888764 456888 88865 11111100 000 000000000
Q ss_pred --------------------ECCCCCeEEEeecCCeEEE-ecccCc--eeeeec-------c---cCCceeEEEECCCCC
Q psy15191 144 --------------------FGPRGDYIIAHGFQGSLHL-DVTTWK--QIQTLP-------C---HQLTITQLAFSPDDT 190 (312)
Q Consensus 144 --------------------~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~~~-------~---~~~~v~~~~~~~~~~ 190 (312)
..+++..++..+. +.+.+ |..+.. ....+. . .......++++||++
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred cCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 0233333333333 55555 553211 111111 0 011122278999999
Q ss_pred EEEEEec-C--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEec-cCCeEEEEecCCCC
Q psy15191 191 HLVSVSR-D--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS-RDGVCVVWGLGEPP 259 (312)
Q Consensus 191 ~l~~~~~-d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~ 259 (312)
.++.+.. + +.+.++|+.+.+.+..+.. .....+++|+|||++ +++.. .++.|.++|+.+..
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--------g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--------GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--------EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--------CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 8887643 2 3566999999988877663 335789999999984 55555 58999999998873
Q ss_pred CCcccccccccceeEEeeccCcceeEEEecc
Q psy15191 260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASH 290 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 290 (312)
.+..+.... ....+++.+
T Consensus 349 ------------vv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 349 ------------DQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp ------------EEEECCCCS-CCCEEECCC
T ss_pred ------------EEEEEECCC-CCCEEEeec
Confidence 455555433 335566554
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.20 E-value=2.1e-08 Score=79.88 Aligned_cols=211 Identities=8% Similarity=-0.015 Sum_probs=125.5
Q ss_pred CceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCC
Q psy15191 6 GDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE 85 (312)
Q Consensus 6 ~~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~ 85 (312)
..+|+.+ |+.++......+.|. .|++. ++ ...+..+...+..+++.++ |+++++...++.|.+|+.+ +
T Consensus 49 gp~~~~~-g~~l~~~d~~~~~i~--~~~~~-g~-~~~~~~~~~~~~gl~~d~d------G~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 49 GPAWWEA-QRTLVWSDLVGRRVL--GWRED-GT-VDVLLDATAFTNGNAVDAQ------QRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EEEEEGG-GTEEEEEETTTTEEE--EEETT-SC-EEEEEESCSCEEEEEECTT------SCEEEEETTTTEEEEECTT-S
T ss_pred CCeEeCC-CCEEEEEECCCCEEE--EEeCC-CC-EEEEeCCCCccceeeECCC------CCEEEEECCCCEEEEECCC-C
Confidence 3456654 333333333445553 35663 43 4455556678899999888 8877776666789999875 3
Q ss_pred ccc------------ccccccCCCCCceEEE----EeC-------------CCcEEEEcCCCCcceeeeeeeecccCCCc
Q psy15191 86 GNY------------LPYHMRDDSKQLHLLS----CSM-------------DKSIIVWAPDPTTGLWLETARVGEVGGNT 136 (312)
Q Consensus 86 ~~~------------~~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 136 (312)
... .+......+++.++++ +.. .+.|..+|..+++...+. ..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---------~~ 187 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---------DL 187 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---------EE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---------cC
Confidence 321 1112334566666665 322 245666776554322221 11
Q ss_pred cceeEEEECCCCCeEEEeecC------CeEEE-ecccCceee--ee-cccCCceeEEEECCCCCEEEEEecCCeEEEEEc
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQ------GSLHL-DVTTWKQIQ--TL-PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKR 206 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 206 (312)
.....++|+|+++.|+.+... +.|.. ++....+.. .+ .........++++++|++. +++.+ .|.+|+.
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~ 265 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS 265 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC
Confidence 235789999999988777654 56766 544322111 11 1123445678999999944 44444 5999998
Q ss_pred cCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191 207 QSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG 248 (312)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 248 (312)
. ++.+..+..+ . .+..++|+|+++.|..++.++
T Consensus 266 ~-g~~~~~~~~~-------~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 266 D-GQLLGHIPTP-------G-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp T-SCEEEEEECS-------S-CCCEEEECTTSCEEEEEETTE
T ss_pred C-CCEEEEEECC-------C-ceeEEEEeCCCCEEEEEcCCe
Confidence 4 5555555532 2 477899999998888777664
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=1e-10 Score=95.77 Aligned_cols=175 Identities=13% Similarity=0.010 Sum_probs=93.6
Q ss_pred CceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccc
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLG 138 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 138 (312)
+..+++++.||.|..||..+++.. .+...+...++..+++++.|+.|+.||..+++..+.......... ...+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~-~~sp 87 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV-QASP 87 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH-TTCS
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc-ccCc
Confidence 568999999999999999888763 122233344555777788999999999988665443322211000 0011
Q ss_pred eeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
+ +. .+..+++++.++.++. |.++++.+..+..+. ...++|++..+++++.|+.|+.||.++++....+..
T Consensus 88 ~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 88 C----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp C----C------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred e----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1 11 3456777888888887 888887776665332 234567888999999999999999998876544432
Q ss_pred cCCCCcccceeeEEEEEcCCC---ceEEEeccCCeEEEEecCCC
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDS---RYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~ 258 (312)
. .....++.++. ..++.++.||.|+.||..++
T Consensus 159 ~---------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 159 F---------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp E---------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred c---------cccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 1 01123333332 45777889999999999887
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=1.1e-08 Score=84.41 Aligned_cols=228 Identities=12% Similarity=0.042 Sum_probs=130.1
Q ss_pred CCceEEEe-cCC----CcEEEeeecCCccc-------ccccccCCCCCceEEEEe----------CCCcEEEEcCCCCcc
Q psy15191 64 EHKDLVSC-SLD----KTAILWKYVSEGNY-------LPYHMRDDSKQLHLLSCS----------MDKSIIVWAPDPTTG 121 (312)
Q Consensus 64 ~~~~l~s~-~~d----g~i~vw~~~~~~~~-------~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~ 121 (312)
+++.++.. ..+ +.|.+.|..+.+.. .. ....++++..++++. .++.|.++|..+.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~- 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL- 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc-
Confidence 35544444 333 79999999887762 23 455577888777775 46789999999854
Q ss_pred eeeeeeeecccCC--CccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCC-------ceeEEEE----
Q psy15191 122 LWLETARVGEVGG--NTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQL-------TITQLAF---- 185 (312)
Q Consensus 122 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~-------~v~~~~~---- 185 (312)
....+....... .......+.++|+|++++++.. ++.|.+ |..+.+.+..+.-... .-.-+.+
T Consensus 161 -vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 161 -PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp -EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred -EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 333333210000 1123567899999999998874 567877 9999988776652110 0001223
Q ss_pred ---------------------------------CCCCCEEEEEecCCeEEEEEccCCCeEEE--EeccCCCCcc---cce
Q psy15191 186 ---------------------------------SPDDTHLVSVSRDRRWGLYKRQSSGRLSL--VACSDKTNGV---HKR 227 (312)
Q Consensus 186 ---------------------------------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~---~~~ 227 (312)
.+++..++..+..+.+.+.|+........ +......... ...
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 33333333333444455555543221110 0000000000 011
Q ss_pred eeEEEEEcCCCceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCC-eEE
Q psy15191 228 IIWGVAWSHDSRYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT-LLA 296 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 296 (312)
....++++|+++.++.... ++.|.++|+.+.. .+..+... ....+++|+|||+ +++
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k------------vv~~I~vg-~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE------------RINKIELG-HEIDSINVSQDAEPLLY 386 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC------------EEEEEEEE-EEECEEEECCSSSCEEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe------------EEEEEECC-CCcCeEEEccCCCEEEE
Confidence 1223689999887666542 3579999998874 45555432 2578999999999 888
Q ss_pred EEecCCCcccceEEe
Q psy15191 297 SACKATKPEHAAIII 311 (312)
Q Consensus 297 s~s~d~~~~dg~i~i 311 (312)
++.. .++.|.+
T Consensus 387 v~n~----~s~~VsV 397 (426)
T 3c75_H 387 ALSA----GTQTLHI 397 (426)
T ss_dssp EEET----TTTEEEE
T ss_pred EEcC----CCCeEEE
Confidence 7752 2444655
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=4.3e-08 Score=80.32 Aligned_cols=261 Identities=11% Similarity=0.066 Sum_probs=153.4
Q ss_pred CCceEEEEEeCCC---CceEEEEcc--ccCcEEEEEEecC-----cCcC--CCCce-EEEecCCCcEEEeeecCC----c
Q psy15191 24 KSKVMAVKWNGEG---GKVLYTLTN--HKSKVMAVKWVLN-----TSLD--PEHKD-LVSCSLDKTAILWKYVSE----G 86 (312)
Q Consensus 24 ~~~v~~~~w~~~~---~~~~~~~~~--h~~~v~~~~~~~~-----~~~~--~~~~~-l~s~~~dg~i~vw~~~~~----~ 86 (312)
.+.+..+.-++++ ++.+..+.- -.++...+.|+.+ ..++ .+.++ ++++..+++|.+.|+.+. +
T Consensus 42 ~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~ 121 (462)
T 2ece_A 42 ADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPK 121 (462)
T ss_dssp CCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCE
T ss_pred CCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCce
Confidence 3445444444433 667766542 1234445555111 0122 33555 566778899999998754 1
Q ss_pred ccccc---------------cccCCCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191 87 NYLPY---------------HMRDDSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG 145 (312)
Q Consensus 87 ~~~~~---------------~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (312)
...+. .....+++ .++++..+ +.|.++|.++.+. +.+.+.. .....-.+.+-|+
T Consensus 122 ~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v--~~~~~~~--~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 122 IIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP--LGKWEID--RGDQYLAYDFWWN 196 (462)
T ss_dssp EEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE--EEECCSB--CTTCCCCCCEEEE
T ss_pred eeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE--EEEEccC--CCCccccceEEEC
Confidence 11111 11235677 66666555 7899999988543 2232211 1122234568889
Q ss_pred CCCCeEEEee-------------------cCCeEEE-ecccCceeeeeccc--CCceeEEEE--CCCCCEEEEEec----
Q psy15191 146 PRGDYIIAHG-------------------FQGSLHL-DVTTWKQIQTLPCH--QLTITQLAF--SPDDTHLVSVSR---- 197 (312)
Q Consensus 146 ~~~~~l~~~~-------------------~~~~i~~-d~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~~~---- 197 (312)
|+++.+++.. ....|.+ |..+.+....+... ......+.| +|++++++++++
T Consensus 197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~ 276 (462)
T 2ece_A 197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK 276 (462)
T ss_dssp TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT
T ss_pred CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc
Confidence 9999888874 3577888 88877777666532 123445555 999998887774
Q ss_pred --CCeEEEEEccCCCeEEEEe---ccCCCC---c----c----cceeeEEEEEcCCCceEEEecc-CCeEEEEecCCCCC
Q psy15191 198 --DRRWGLYKRQSSGRLSLVA---CSDKTN---G----V----HKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEPPT 260 (312)
Q Consensus 198 --d~~i~~wd~~~~~~~~~~~---~~~~~~---~----~----~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~ 260 (312)
+++|.+|.... ....... ...... . . ....+..+.++|||++|..+.. .+.|.+||+.....
T Consensus 277 ~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~ 355 (462)
T 2ece_A 277 DLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK 355 (462)
T ss_dssp TCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 56888877664 3222211 111000 0 0 0244778999999999887764 67999999974422
Q ss_pred CcccccccccceeEEeecc--------------CcceeEEEeccCCCeEEEEe
Q psy15191 261 EEDLVQNTLWPEVQKLYGH--------------GYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~s~s 299 (312)
.. .+..+.-. .+....++++|||++|.++.
T Consensus 356 ~~---------lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 356 PV---------LTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CE---------EEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cE---------EEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11 23333211 01358899999999999886
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=3e-07 Score=73.89 Aligned_cols=208 Identities=11% Similarity=-0.039 Sum_probs=122.2
Q ss_pred ceEeCCCCeEEEEeccCCCceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc
Q psy15191 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG 86 (312)
Q Consensus 7 ~v~~~~~~~~~~~~~~h~~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~ 86 (312)
..|++..+..+.. ......| ..|++++++.. .+. ....+.+++|.++ ++++++. .+ .|.+||..+++
T Consensus 54 p~~~~~~~~l~~~-d~~~~~i--~~~d~~~~~~~-~~~-~~~~v~~i~~~~d------g~l~v~~-~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 54 PTFDPASGTAWWF-NILEREL--HELHLASGRKT-VHA-LPFMGSALAKISD------SKQLIAS-DD-GLFLRDTATGV 120 (326)
T ss_dssp EEEETTTTEEEEE-EGGGTEE--EEEETTTTEEE-EEE-CSSCEEEEEEEET------TEEEEEE-TT-EEEEEETTTCC
T ss_pred CeEeCCCCEEEEE-ECCCCEE--EEEECCCCcEE-EEE-CCCcceEEEEeCC------CeEEEEE-CC-CEEEEECCCCc
Confidence 3566554444433 2223344 23667666543 333 3467999999998 8777765 34 48999987665
Q ss_pred ccc------------cccccCCCCCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCC
Q psy15191 87 NYL------------PYHMRDDSKQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG 148 (312)
Q Consensus 87 ~~~------------~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 148 (312)
... +.....++++.++++... .+.|..++ +++ ... .. ........++|+|++
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~-~~-----~~~~~~~~i~~s~dg 190 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--VTK-LF-----ADISIPNSICFSPDG 190 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--EEE-EE-----EEESSEEEEEECTTS
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--EEE-ee-----CCCcccCCeEEcCCC
Confidence 421 112223556655554432 23455555 222 111 11 112235789999999
Q ss_pred CeEEEee-cCCeEEE-ecc--cC-cee-----eeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191 149 DYIIAHG-FQGSLHL-DVT--TW-KQI-----QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 149 ~~l~~~~-~~~~i~~-d~~--~~-~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 218 (312)
+.++.+. .++.|.+ +.. +. .+. ..+.........++++++|++.++...++.|..||. +.+.+..+..
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~- 268 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV- 268 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-
T ss_pred CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-
Confidence 8776554 4567777 654 44 221 112223456788999999987777666789999998 4555555543
Q ss_pred CCCCcccceeeEEEEEc-CCCceEEEec
Q psy15191 219 DKTNGVHKRIIWGVAWS-HDSRYFLTIS 245 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~-~~~~~l~s~~ 245 (312)
....+++++|+ |+++.|+.++
T Consensus 269 ------~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 269 ------PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ------SCSBEEEEEEESTTSCEEEEEE
T ss_pred ------CCCCcEEEEEecCCCCEEEEEe
Confidence 34458899998 8877665443
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.08 E-value=3.3e-08 Score=87.47 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=111.4
Q ss_pred CCCceEEEEeCCCc-------------------EEEEcCCCCcceeeeeeeecccCC--CccceeEEEECCCCC---eEE
Q psy15191 97 SKQLHLLSCSMDKS-------------------IIVWAPDPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGD---YII 152 (312)
Q Consensus 97 ~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~---~l~ 152 (312)
+...+++.+..++. |..+|.++++..+........... ...++.......+|+ .++
T Consensus 244 ~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~ 323 (689)
T 1yiq_A 244 PELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLM 323 (689)
T ss_dssp TTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEE
Confidence 34457777777653 999999997766654432111000 111121122223554 688
Q ss_pred EeecCCeEEE-ecccCceeeeecccC---------------------------------------CceeEEEECCCCCEE
Q psy15191 153 AHGFQGSLHL-DVTTWKQIQTLPCHQ---------------------------------------LTITQLAFSPDDTHL 192 (312)
Q Consensus 153 ~~~~~~~i~~-d~~~~~~~~~~~~~~---------------------------------------~~v~~~~~~~~~~~l 192 (312)
.++.+|.+++ |.++++++....-.. ..-..++++|+..++
T Consensus 324 ~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~ 403 (689)
T 1yiq_A 324 QAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLV 403 (689)
T ss_dssp ECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEE
Confidence 8899999998 988888763221000 001237888888777
Q ss_pred EEEec---------------------------------------------CCeEEEEEccCCCeEEEEeccCCCCcccce
Q psy15191 193 VSVSR---------------------------------------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKR 227 (312)
Q Consensus 193 ~~~~~---------------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 227 (312)
++... +|.|+.||+.+++..-..... .
T Consensus 404 yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--------~ 475 (689)
T 1yiq_A 404 YIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--------T 475 (689)
T ss_dssp EEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--------S
T ss_pred EEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--------C
Confidence 76532 377999999988877666532 2
Q ss_pred eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccC-cceeEEEeccCCCeEEE
Q psy15191 228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG-YEIYSLAASHDGTLLAS 297 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s 297 (312)
++....+...+.+++.++.||.|+.||.+++. .+.++.... ....-+.|..+|+.+++
T Consensus 476 ~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~------------~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE------------KLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCC------------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CccCccceECCCEEEEECCCCcEEEEECCCCc------------cceeeeCCCCcccCceEEEECCEEEEE
Confidence 22223455577889999999999999999984 444444332 22244677888874443
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.07 E-value=4.5e-08 Score=86.60 Aligned_cols=179 Identities=10% Similarity=0.121 Sum_probs=109.0
Q ss_pred EEEeCCCCceEEEEccccCc----------E-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---c-----
Q psy15191 30 VKWNGEGGKVLYTLTNHKSK----------V-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---P----- 90 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---~----- 90 (312)
.++|..+|+.+.++..+... + ..+.+ . +..++.++.|+.|..+|..+++..- .
T Consensus 83 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~------~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~ 154 (689)
T 1yiq_A 83 YALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--W------KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHK 154 (689)
T ss_dssp EEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTT
T ss_pred EEEECCCCceeEEEcCCCCccccccccccCCCCccEE--E------CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCC
Confidence 34788899999888654321 0 01111 1 4578888889999999998887631 1
Q ss_pred --ccccCCC--CCceEEEEe------CCCcEEEEcCCCCcceeeeeeeecccC------------------------CCc
Q psy15191 91 --YHMRDDS--KQLHLLSCS------MDKSIIVWAPDPTTGLWLETARVGEVG------------------------GNT 136 (312)
Q Consensus 91 --~~~~~~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~~~ 136 (312)
......+ .+..++.+. .++.|..||.++++..+.......... +..
T Consensus 155 ~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~ 234 (689)
T 1yiq_A 155 RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGG 234 (689)
T ss_dssp SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEEC
T ss_pred CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCC
Confidence 0111122 122444443 368999999999876665432100000 001
Q ss_pred cceeEEEECCCCCeEEEeecCCe-------------------EEE-ecccCceeeeecc--cC-------CceeEEEECC
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGS-------------------LHL-DVTTWKQIQTLPC--HQ-------LTITQLAFSP 187 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~-------------------i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~~ 187 (312)
.....++++|+...++.+..++. |.- |.++++.+-.++. |. ..+.-.....
T Consensus 235 ~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~ 314 (689)
T 1yiq_A 235 TAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI 314 (689)
T ss_dssp CCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence 11135788898888888887753 444 9999888876652 21 1111122222
Q ss_pred CCC---EEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191 188 DDT---HLVSVSRDRRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 188 ~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~ 216 (312)
+|+ .++.++.+|.++++|.++++.+....
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 554 78889999999999999988875443
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=5.7e-08 Score=85.75 Aligned_cols=179 Identities=10% Similarity=0.039 Sum_probs=110.8
Q ss_pred EEEeCCCCceEEEEccccCc----------E-EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccccc----
Q psy15191 30 VKWNGEGGKVLYTLTNHKSK----------V-MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMR---- 94 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~---- 94 (312)
.++|..+|+.+.++...... + ..+.+ . +..++.++.|+.|..+|..+++..-.....
T Consensus 90 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~------~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~ 161 (677)
T 1kb0_A 90 HAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--W------KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK 161 (677)
T ss_dssp EEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--E------CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC
Confidence 34688899999888754221 0 11222 1 457888888999999999888763111110
Q ss_pred ------CCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeeccc----------------C---------CC
Q psy15191 95 ------DDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEV----------------G---------GN 135 (312)
Q Consensus 95 ------~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~----------------~---------~~ 135 (312)
..+ .+..++.++. ++.|+.+|..+++..+......... . +.
T Consensus 162 ~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g 241 (677)
T 1kb0_A 162 GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGG 241 (677)
T ss_dssp SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEE
T ss_pred cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCC
Confidence 011 2235555553 6899999999977665443221110 0 01
Q ss_pred ccceeEEEECCCCCeEEEeecCC-------------------eEEE-ecccCceeeeecc--cC-------CceeEEEEC
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGFQG-------------------SLHL-DVTTWKQIQTLPC--HQ-------LTITQLAFS 186 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~~~-------------------~i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~ 186 (312)
......++++|++..++.+..++ .|.. |.++++.+-.++. |. ....-+...
T Consensus 242 ~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~ 321 (677)
T 1kb0_A 242 GTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIK 321 (677)
T ss_dssp CCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEE
T ss_pred cccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecc
Confidence 11123578889888888877664 2444 8888888776552 21 112222333
Q ss_pred CCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191 187 PDD---THLVSVSRDRRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 187 ~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~ 216 (312)
.+| ..++.++.+|.++++|..+++.+....
T Consensus 322 ~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 322 IAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 367 678999999999999999998876655
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=4.5e-08 Score=86.43 Aligned_cols=168 Identities=16% Similarity=0.103 Sum_probs=106.5
Q ss_pred cEEEEcCCCCcceeeeeeeecccC--CCccceeEEEECCCC---CeEEEeecCCeEEE-ecccCceeeeecccC------
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVG--GNTLGFYGCKFGPRG---DYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ------ 177 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~---~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~------ 177 (312)
.|..+|.++++..+.........- .......-+....+| ..++.++.+|.+++ |..+++++.......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 499999999776665443211000 001122223333467 67888999999999 999888775543110
Q ss_pred ----C-ce------------------------eEEEECCCCCEEEEEecC------------------------------
Q psy15191 178 ----L-TI------------------------TQLAFSPDDTHLVSVSRD------------------------------ 198 (312)
Q Consensus 178 ----~-~v------------------------~~~~~~~~~~~l~~~~~d------------------------------ 198 (312)
+ .+ ..++++|+..++++...+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0 01 257889988888775432
Q ss_pred -------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccc
Q psy15191 199 -------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLV 265 (312)
Q Consensus 199 -------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 265 (312)
|.|..||+.+++..-.+.. ..++....+...+.+++.++.||.+++||..++.
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--------~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~------ 509 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH--------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE------ 509 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEE--------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC------
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCC--------CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc------
Confidence 7799999998887766653 2223344566677888889999999999999884
Q ss_pred cccccceeEEeec-cCcceeEEEeccCCCeEEE
Q psy15191 266 QNTLWPEVQKLYG-HGYEIYSLAASHDGTLLAS 297 (312)
Q Consensus 266 ~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 297 (312)
.+..+.. +.....-+.|.++|+.++.
T Consensus 510 ------~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 510 ------KLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp ------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ------eeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 4444442 2223344667788875544
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.05 E-value=6.4e-08 Score=79.32 Aligned_cols=188 Identities=11% Similarity=0.106 Sum_probs=119.4
Q ss_pred CCCce-EEEEeCCCcEEEEcCCCCc--ceeeeeeeecccC--CCccceeEEEECCCCCeEEEeecC------CeEEE-ec
Q psy15191 97 SKQLH-LLSCSMDKSIIVWAPDPTT--GLWLETARVGEVG--GNTLGFYGCKFGPRGDYIIAHGFQ------GSLHL-DV 164 (312)
Q Consensus 97 ~~~~~-l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~ 164 (312)
.+..+ ++.+..++.|.++|+.+.. ......+...++. ........+...|+| .++++..+ +.+.+ |.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 44444 5567778899999997542 2333333111110 012245678889999 76666555 56666 99
Q ss_pred ccCceeeeecccC---CceeEEEECCCCCEEEEEe-------------------cCCeEEEEEccCCCeEEEEeccCCCC
Q psy15191 165 TTWKQIQTLPCHQ---LTITQLAFSPDDTHLVSVS-------------------RDRRWGLYKRQSSGRLSLVACSDKTN 222 (312)
Q Consensus 165 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~~~~~~ 222 (312)
++.+++....... .--..+-|+|+++.+++.. .+.+|.+||+.+.+....+....
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~--- 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE--- 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---
Confidence 9999988876221 2234688899999888874 36899999999876666655421
Q ss_pred cccceeeEEEEE--cCCCceEEEecc------CCeEEEEecCCCCCCcccccccccceeEEe--ec--------------
Q psy15191 223 GVHKRIIWGVAW--SHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKL--YG-------------- 278 (312)
Q Consensus 223 ~~~~~~v~~~~~--~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~-------------- 278 (312)
.......+.| +|++++++.+++ ++.|.+|....+. |+..+.+ ..
T Consensus 249 --~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~----------~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 249 --ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK----------WNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp --TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE----------EEEEEEEEECCEECCSSCCGGGGGG
T ss_pred --CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc----------eeEEEEEeCCCcccccccccccccc
Confidence 1123344555 999998887774 5688887765421 1111111 00
Q ss_pred --cCcceeEEEeccCCCeEEEEec
Q psy15191 279 --HGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 279 --~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
-......+.+||||++|.++..
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEET
T ss_pred ccCCCceeEEEECCCCCEEEEEeC
Confidence 0245788999999999988764
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.04 E-value=3.6e-07 Score=70.25 Aligned_cols=204 Identities=11% Similarity=0.064 Sum_probs=134.9
Q ss_pred ceEEEEccccC--cEEEEEEecCcCcCCCCceEEEecC--CCcEEEeeecCCcccccccccCCC--------CCceEEEE
Q psy15191 38 KVLYTLTNHKS--KVMAVKWVLNTSLDPEHKDLVSCSL--DKTAILWKYVSEGNYLPYHMRDDS--------KQLHLLSC 105 (312)
Q Consensus 38 ~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~~~~~~--------~~~~l~~~ 105 (312)
+.+.++. |.. ....+.|+++ +.++++.+. ++.|.+.|+.+++..........+ .+...++.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~d------g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAEN------DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECST------TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred eEEEEEE-CCCCCCcccEEEeCC------CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE
Confidence 4556664 443 3689999887 666666553 579999999998874332221111 22344555
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccC-----Cc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-----LT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-----~~ 179 (312)
-.++.+.++|..+. ..+.+++.. .+ ....++++++.++++..++.+.+ |..+.+....+.-.. ..
T Consensus 83 ~~~~~v~viD~~t~--~v~~~i~~g--~~-----~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 83 WLKNIGFIYDRRTL--SNIKNFTHQ--MK-----DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp TTCSEEEEEETTTT--EEEEEEECC--SS-----SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred ecCCEEEEEECCCC--cEEEEEECC--CC-----CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccc
Confidence 67889999999874 334444422 01 12335568888887777888888 999988887766211 23
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCc-eEEEeccCCeEEE
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSR-YFLTISRDGVCVV 252 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~i 252 (312)
++.+.|. ++..++....++.|.+.|..+++....+...... ........+.++|+|+++ +++++...+.+.+
T Consensus 154 ~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 154 LNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred ceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 6788887 7755555556789999999999988888753100 000123568999999986 5566667889999
Q ss_pred EecCCC
Q psy15191 253 WGLGEP 258 (312)
Q Consensus 253 wd~~~~ 258 (312)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 888665
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=9.3e-08 Score=81.11 Aligned_cols=192 Identities=13% Similarity=0.103 Sum_probs=117.8
Q ss_pred CCceEEEEeC-CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE-C-CCCCeEEEee------------------c
Q psy15191 98 KQLHLLSCSM-DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF-G-PRGDYIIAHG------------------F 156 (312)
Q Consensus 98 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~ 156 (312)
++.+++.+.. ++.|.+.|+.+.+...+...+ ....+..+++ + |+++++++++ .
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip------~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC------CCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 4555555554 556999999985433222222 2234678887 5 9999998885 2
Q ss_pred CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCC------------------------------------
Q psy15191 157 QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR------------------------------------ 199 (312)
Q Consensus 157 ~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------------------ 199 (312)
++.+.+ |..+.+......-. +....++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 345555 88888887776622 2456788999999999888653
Q ss_pred --eEEEEEccC--CCe-EEEEeccCCCCcccceeeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCC--cccccccccc
Q psy15191 200 --RWGLYKRQS--SGR-LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTE--EDLVQNTLWP 271 (312)
Q Consensus 200 --~i~~wd~~~--~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~ 271 (312)
.|.+.|.++ .+. ...+. -.....++.++|||++++.++ .+..|.++|+.+.... ..+. ....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ip--------vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~--~~~~ 322 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIP--------IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD--PRSA 322 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEE--------EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC--GGGG
T ss_pred ECcEEEEeCcccCCceeEEEEe--------cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC--cccc
Confidence 255555554 222 22333 222355789999999877665 6789999999853100 0000 0000
Q ss_pred eeEEeeccCcceeEEEeccCCCeEEEEecCCCcccceEEeC
Q psy15191 272 EVQKLYGHGYEIYSLAASHDGTLLASACKATKPEHAAIIIW 312 (312)
Q Consensus 272 ~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~~dg~i~iW 312 (312)
....+. -......++|+|+|...++. --|++|.+|
T Consensus 323 v~~~v~-vG~gP~h~aF~~dG~aY~t~-----~ldsqV~kw 357 (595)
T 1fwx_A 323 VVAEPE-LGLGPLHTAFDGRGNAYTSL-----FLDSQVVKW 357 (595)
T ss_dssp EEECCB-CCSCEEEEEECTTSEEEEEE-----TTTTEEEEE
T ss_pred eEEEcC-CCCCcceEEECCCCeEEEEE-----ecCCcEEEE
Confidence 222222 23457899999999555555 345558776
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.02 E-value=7.8e-07 Score=72.89 Aligned_cols=181 Identities=7% Similarity=-0.007 Sum_probs=99.3
Q ss_pred eEEEecCCCcEEEeeecCCccccccc-----------ccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCC
Q psy15191 67 DLVSCSLDKTAILWKYVSEGNYLPYH-----------MRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGN 135 (312)
Q Consensus 67 ~l~s~~~dg~i~vw~~~~~~~~~~~~-----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 135 (312)
.++.++.++.|..+|..+++..-... ......+..++.+..++.+..+|..+++..+............
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC------
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcc
Confidence 45556666777777766665410000 0000112356667777788888877765544333211000000
Q ss_pred ccceeEEEECC--CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE
Q psy15191 136 TLGFYGCKFGP--RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL 212 (312)
Q Consensus 136 ~~~v~~~~~~~--~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 212 (312)
...+..+...| .+..+++++.++.+.. |.++.+.+-.... .....+.. ++..++.++.++.+..+|..+++..
T Consensus 225 ~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 225 IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp -----CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred cccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 00000000111 2456677777777766 8888777655442 22344444 3567888888999999999988876
Q ss_pred EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
........ ..+..... .+..|+.++.+|.|+++|..++.
T Consensus 301 w~~~~~~~------~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 301 WTQSDLLH------RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEECTTTT------SCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred EeecccCC------CcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 55442111 11111222 24578888889999999998873
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=1.5e-07 Score=76.18 Aligned_cols=233 Identities=10% Similarity=0.073 Sum_probs=134.8
Q ss_pred CCceEeCCCCeEEEEecc-CCC--ceEEEEEeCCCCceEEEE-------ccccCcEEEEEEecCcCcCCCCceEEEecC-
Q psy15191 5 PGDVVNGEGGKVLYTLTN-HKS--KVMAVKWNGEGGKVLYTL-------TNHKSKVMAVKWVLNTSLDPEHKDLVSCSL- 73 (312)
Q Consensus 5 ~~~v~~~~~~~~~~~~~~-h~~--~v~~~~w~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~- 73 (312)
|..|.-..+|+.+.+... +.+ .|..+. +++. ..+ .+|...+..+++.++ ++++++-..
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~----~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~------g~L~v~D~g~ 87 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELT----QDGL-IPFPPQSGNAIITFDTVLGIKSDGN------GIVWMLDNGN 87 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEE----TTEE-EESCCCCSSCCCCCSCEEEEEECSS------SEEEEEECHH
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEEC----CCCe-ecCCCcccCcccceeEeeEEEEcCC------CcEEEEcCCC
Confidence 444555556776666432 222 454332 3433 222 235568999999988 776665443
Q ss_pred ----CCcEEEeeecCCcccccccc--------------cCCCC-CceEEEEe---CCCcEEEEcCCCCcceeeeee--ee
Q psy15191 74 ----DKTAILWKYVSEGNYLPYHM--------------RDDSK-QLHLLSCS---MDKSIIVWAPDPTTGLWLETA--RV 129 (312)
Q Consensus 74 ----dg~i~vw~~~~~~~~~~~~~--------------~~~~~-~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~--~~ 129 (312)
++.|.+||+.+++....... ..+++ +..+++.. .++.|.+||+.+++....... ..
T Consensus 88 ~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 57899999987764221111 11222 33345544 578899999876442221100 00
Q ss_pred ------cccCC--------------CccceeEEEECCCCCeEEEeecCC-eEEE-eccc---Cce-----ee--eecccC
Q psy15191 130 ------GEVGG--------------NTLGFYGCKFGPRGDYIIAHGFQG-SLHL-DVTT---WKQ-----IQ--TLPCHQ 177 (312)
Q Consensus 130 ------~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~~~-~i~~-d~~~---~~~-----~~--~~~~~~ 177 (312)
....+ ....+..++++|+++.|+.+...+ .+.. +... ..+ .. ...++.
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK 247 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence 00000 012368899999999888877665 4433 3221 100 00 111234
Q ss_pred CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
.....++++++|+++++...++.|.+||..+++.......+ ....+.+++|.++++++++.+..+.+.+|.
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 45678999999999999888999999998444332222211 234578999999999888877655554443
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.00 E-value=2.1e-08 Score=84.97 Aligned_cols=219 Identities=10% Similarity=0.059 Sum_probs=134.7
Q ss_pred CCceEEEecC-CCcEEEeeecCCccccccccc----------CC-CCCceEEEEe------------------CCCcEEE
Q psy15191 64 EHKDLVSCSL-DKTAILWKYVSEGNYLPYHMR----------DD-SKQLHLLSCS------------------MDKSIIV 113 (312)
Q Consensus 64 ~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~~----------~~-~~~~~l~~~~------------------~d~~i~i 113 (312)
||++++.+.. +.+|.+-|+.+.++..+.-.+ .. |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 3777666554 567999999987753322221 13 6677777774 3457888
Q ss_pred EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----------------------------------
Q psy15191 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG----------------------------------- 158 (312)
Q Consensus 114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----------------------------------- 158 (312)
.|..+. ....+.... + ....++++|+|+++++.+.+.
T Consensus 180 ID~~t~--~v~~qI~Vg---g---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 180 VDADKW--EVAWQVLVS---G---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EETTTT--EEEEEEEES---S---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred EECCCC--eEEEEEEeC---C---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 888873 333333321 1 235578999999998887553
Q ss_pred ---eEEE-eccc--Cce-eeeecccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCe------------EEEEecc
Q psy15191 159 ---SLHL-DVTT--WKQ-IQTLPCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGR------------LSLVACS 218 (312)
Q Consensus 159 ---~i~~-d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~------------~~~~~~~ 218 (312)
.+.+ |.++ ... ...+. -.....++.++|||+++++++ .+.+|.++|+.+.+. ...+.
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-- 328 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-- 328 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--
T ss_pred EECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--
Confidence 1333 5544 322 22222 123456789999999887765 578999999986421 11111
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcc-----eeEEEeccCCC
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE-----IYSLAASHDGT 293 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~ 293 (312)
.......++|+|+|...++.-.|+.|.+||+..... .+...+..+.+.++..|-.+ -.++.++|||+
T Consensus 329 ------vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~--~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 329 ------LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIR--AYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp ------CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHH--HHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred ------CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhh--hhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 334577899999995555667899999999876210 00000112255566554332 23446789999
Q ss_pred eEEEEecC
Q psy15191 294 LLASACKA 301 (312)
Q Consensus 294 ~l~s~s~d 301 (312)
+|+++..-
T Consensus 401 ~l~~~Nk~ 408 (595)
T 1fwx_A 401 WLVCLSKF 408 (595)
T ss_dssp EEEEEESC
T ss_pred EEEEcCCC
Confidence 99998654
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=1.8e-09 Score=88.33 Aligned_cols=166 Identities=10% Similarity=-0.049 Sum_probs=92.6
Q ss_pred EEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------cccccCCCCCc
Q psy15191 30 VKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------PYHMRDDSKQL 100 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------~~~~~~~~~~~ 100 (312)
.+||..+|+.+.++.. +.+.+..+..+ +..+++++.||.|+.||..+++..- ....+.-..+.
T Consensus 22 ~a~d~~tG~~~W~~~~--~~~~s~p~~~~------g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~ 93 (369)
T 2hz6_A 22 HAVSKRTGSIKWTLKE--DPVLQVPTHVE------EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDG 93 (369)
T ss_dssp EEEETTTCCEEEEEEC--CCSCCCC-----------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC----
T ss_pred EEEECCCCCEEEEecC--CCceecceEcC------CCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCC
Confidence 4589999999998876 45555444444 7788888999999999998776521 01111111344
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCc
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLT 179 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~ 179 (312)
.+++++.++.|+.||..+++..+..... . ...++|++..+++++.++.++. |.++++.+-.+..+ .
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~-------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~ 160 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEKQQTLSSA-------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--D 160 (369)
T ss_dssp -CCCCEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--E
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEecCC-------C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--c
Confidence 6788889999999999986654433211 1 1345668888999999999888 77777665544321 1
Q ss_pred eeEEEECCCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191 180 ITQLAFSPDD---THLVSVSRDRRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 180 v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~ 216 (312)
.....+.++. ..+++++.||.++.||.++++.+....
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 2223344332 457778899999999999888766554
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.93 E-value=4.3e-07 Score=69.07 Aligned_cols=190 Identities=11% Similarity=0.134 Sum_probs=123.2
Q ss_pred ceEEEEccccCc--EEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCcccccccccCC-------CCC-ceEEEE
Q psy15191 38 KVLYTLTNHKSK--VMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNYLPYHMRDD-------SKQ-LHLLSC 105 (312)
Q Consensus 38 ~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~~-------~~~-~~l~~~ 105 (312)
+.++++. |... ...+.|+ + +.++.+.+.+| .|+++|+.+++.......+.. ..+ ...+..
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~------~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-N------GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-T------TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred EEEEEec-CCCCcccceEEEE-C------CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEE
Confidence 3456663 5433 4788887 6 67778888776 899999999887432222211 122 234445
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeeccc--C---Cc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH--Q---LT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~--~---~~ 179 (312)
-.++.+.+||..+.+ .+.+++.. + ....+.++++.|+....++.+.+ |..+.+....+.-. . ..
T Consensus 104 w~~~~v~v~D~~t~~--~~~ti~~~---~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 104 WKNGLGFVWNIRNLR--QVRSFNYD---G-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp SSSSEEEEEETTTCC--EEEEEECS---S-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred eeCCEEEEEECccCc--EEEEEECC---C-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 568899999998844 33344321 1 11233356777777766778888 99999888876621 1 33
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-----cccceeeEEEEEcCCCceEEEecc
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-----GVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
++.+.|. +|+.++..-.++.|.+.|.++++....+....... .....-.+.+||+|+++.|+..+.
T Consensus 174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5567776 77655555568899999999999888887642211 012345789999998876665553
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=1.1e-07 Score=84.52 Aligned_cols=179 Identities=11% Similarity=0.056 Sum_probs=108.1
Q ss_pred ccCCCCCceEEEE-----eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCe--------
Q psy15191 93 MRDDSKQLHLLSC-----SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-------- 159 (312)
Q Consensus 93 ~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------- 159 (312)
..++|++.+++.+ +....|+++|+.+++.... ... ......++|+ |++.|+.+..+..
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~-------~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK-------DVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE-------EEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC-------CceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 3567888877743 2335799999998653221 111 1113467899 9999988877632
Q ss_pred -----EEE-ecccCce----eeeecc-cCCceeEEEECCCCCEEEEEec----CCeEEEEEccCCC-eEEEEeccCCCCc
Q psy15191 160 -----LHL-DVTTWKQ----IQTLPC-HQLTITQLAFSPDDTHLVSVSR----DRRWGLYKRQSSG-RLSLVACSDKTNG 223 (312)
Q Consensus 160 -----i~~-d~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~-~~~~~~~~~~~~~ 223 (312)
|++ ++.+... +..... |...+..+.|+|||++|+.... +..|+++|+.+.. ....+..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~------ 278 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG------ 278 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC------
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC------
Confidence 666 4443322 222223 4445788999999998865432 2589999997653 3334433
Q ss_pred ccceeeEEEEEcCCCceE-EEeccC---CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 224 VHKRIIWGVAWSHDSRYF-LTISRD---GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l-~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
+....... +++++..| +.+..+ +.|..+|+..+... ....+..|...+. .|+++++.|+...
T Consensus 279 -~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 279 -DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----------HWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp -SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred -CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------ccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 22223333 55565544 444443 58999998875321 1234555655554 8999999888775
Q ss_pred c
Q psy15191 300 K 300 (312)
Q Consensus 300 ~ 300 (312)
.
T Consensus 345 ~ 345 (693)
T 3iuj_A 345 M 345 (693)
T ss_dssp E
T ss_pred E
Confidence 4
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=1.6e-06 Score=66.66 Aligned_cols=179 Identities=6% Similarity=-0.050 Sum_probs=113.0
Q ss_pred CCCCceEEEEeC--CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceee
Q psy15191 96 DSKQLHLLSCSM--DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQ 171 (312)
Q Consensus 96 ~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~ 171 (312)
++++.++++.+. ++.|.++|+.+++. +...... . ......+++. +..|+.+. .++.+.+ |..+.+.+.
T Consensus 29 ~~dg~Lyvstg~~~~s~v~~iD~~tg~v--~~~i~l~---~-~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 29 AENDTLFESTGLYGRSSVRQVALQTGKV--ENIHKMD---D-SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CSTTEEEEEECSTTTCEEEEEETTTCCE--EEEEECC---T-TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred eCCCeEEEECCCCCCCEEEEEECCCCCE--EEEEecC---C-CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 343434444443 57899999998553 3333321 1 1122345554 45555544 5677777 999999888
Q ss_pred eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191 172 TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV 251 (312)
Q Consensus 172 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 251 (312)
.+...... ...+++||+.++++..++.|.++|..+.+....+....... .-..++.+.|. +++..+....++.|.
T Consensus 101 ~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~--p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 101 NFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH--RVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc--ccccceeEEEE-CCEEEEecCCCCeEE
Confidence 87632122 23455678878777778999999999988877776432100 11236678888 777666666788999
Q ss_pred EEecCCCCCCcccccccccceeEEeecc-------------CcceeEEEeccCCCeEEEEe
Q psy15191 252 VWGLGEPPTEEDLVQNTLWPEVQKLYGH-------------GYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 252 iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~s~s 299 (312)
+.|..++. .+..+.-. ....+.++|+|+++.|..++
T Consensus 176 vID~~tg~------------V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 176 RISAKDGT------------LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEETTTCC------------EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCc------------EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 99998874 33333311 13568999999987555554
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.87 E-value=1.2e-05 Score=62.45 Aligned_cols=212 Identities=11% Similarity=0.021 Sum_probs=122.0
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------ccccCCCC-CceEEEEeCCCcEEEEcCCC
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------YHMRDDSK-QLHLLSCSMDKSIIVWAPDP 118 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------~~~~~~~~-~~~l~~~~~d~~i~i~d~~~ 118 (312)
..+..++|.++ ++.++++-...+.|..++........+ ..+...+. +..+++....+.|.+++++.
T Consensus 36 ~~~~gi~~d~~-----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCV-----DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETT-----TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecC-----CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 45789999886 144556666678999999876543211 11122333 33444445567788888764
Q ss_pred CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec---CCeEEE-ecccCceeeee-cccCCceeEEEECCCCCEEE
Q psy15191 119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF---QGSLHL-DVTTWKQIQTL-PCHQLTITQLAFSPDDTHLV 193 (312)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~i~~-d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~ 193 (312)
.....+ . .........++++|++..|+.+.. .+.|.. +... .....+ .........++++|++..|+
T Consensus 111 ~~~~~~---~----~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 111 TQRRVL---F----DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLC 182 (267)
T ss_dssp CSCEEE---E----CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred CCEEEE---E----ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEE
Confidence 321111 1 111235688999997666655553 356655 4432 222222 12234578899999876665
Q ss_pred EE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccce
Q psy15191 194 SV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPE 272 (312)
Q Consensus 194 ~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 272 (312)
.+ ...+.|..+|............ ......++.. .+.++++....+.|.++|..++. .
T Consensus 183 v~d~~~~~I~~~~~~g~~~~~~~~~--------~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~------------~ 241 (267)
T 1npe_A 183 WVDAGTHRAECLNPAQPGRRKVLEG--------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK------------E 241 (267)
T ss_dssp EEETTTTEEEEEETTEEEEEEEEEC--------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE------------E
T ss_pred EEECCCCEEEEEecCCCceEEEecC--------CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC------------c
Confidence 54 4568899999875433333221 1123456654 45555555567899999987763 3
Q ss_pred eEEeeccC-cceeEEEeccCCC
Q psy15191 273 VQKLYGHG-YEIYSLAASHDGT 293 (312)
Q Consensus 273 ~~~~~~~~-~~v~~~~~s~~~~ 293 (312)
+..+.... .....+++.|++.
T Consensus 242 ~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 242 MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEECCSSCCCCCCEEEECSCC
T ss_pred eEEEccccccccceeeecCccC
Confidence 44443322 2467888888764
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=6.3e-06 Score=67.48 Aligned_cols=207 Identities=6% Similarity=-0.024 Sum_probs=121.7
Q ss_pred EEEeCCCCceEEEEcccc---------CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-------cccc
Q psy15191 30 VKWNGEGGKVLYTLTNHK---------SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-------PYHM 93 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~ 93 (312)
.++|.++|+.+..+.... ..+.+.-. .. +..++.++.++.|..+|..+++..- +...
T Consensus 66 ~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~ 138 (376)
T 3q7m_A 66 KALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VS------GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSR 138 (376)
T ss_dssp EEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EE------TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred EEEEccCCceeeeecCccccccccccCcccccCce-Ee------CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcC
Confidence 347888888887766421 22322211 12 3467778889999999998887521 1111
Q ss_pred cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeee
Q psy15191 94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT 172 (312)
Q Consensus 94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~ 172 (312)
+. ..+..++.++.++.|..+|..+++..+............. ...... .+..++++..++.+.. |..+.+.+-.
T Consensus 139 p~-~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~--~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 139 PV-VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG--ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp CE-EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC--CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred CE-EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC--CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 11 1234788888999999999998766554433211100000 011111 1456777888887776 8888777655
Q ss_pred ecccCC-------ceeEEEECC--CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE
Q psy15191 173 LPCHQL-------TITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT 243 (312)
Q Consensus 173 ~~~~~~-------~v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 243 (312)
...... .+..+.-.| .+..++.++.++.+..+|..+++........ ....+.. ++..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~---------~~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 214 QRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG---------SVNDFIV--DGNRIYL 282 (376)
T ss_dssp EECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC---------CEEEEEE--ETTEEEE
T ss_pred EecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC---------CCCCceE--ECCEEEE
Confidence 442110 000011122 3456778888999999999988776544321 1223333 3556777
Q ss_pred eccCCeEEEEecCCCC
Q psy15191 244 ISRDGVCVVWGLGEPP 259 (312)
Q Consensus 244 ~~~dg~i~iwd~~~~~ 259 (312)
++.++.|..+|..++.
T Consensus 283 ~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 283 VDQNDRVMALTIDGGV 298 (376)
T ss_dssp EETTCCEEEEETTTCC
T ss_pred EcCCCeEEEEECCCCc
Confidence 7788899999988773
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=9.7e-07 Score=67.19 Aligned_cols=188 Identities=10% Similarity=0.057 Sum_probs=123.1
Q ss_pred ceEEEEccccCc--EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccCC-------C-CCceEEEEeC
Q psy15191 38 KVLYTLTNHKSK--VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD-------S-KQLHLLSCSM 107 (312)
Q Consensus 38 ~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~-------~-~~~~l~~~~~ 107 (312)
+.+.++. |... ...+.|+. +.++.+.+.+|.|+++|+++++..... .+.. . .+...+....
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-------~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~ 114 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-------GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT 114 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-------TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS
T ss_pred EEEEEEc-CCCccccceEEEEC-------CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc
Confidence 3455553 4333 46788863 578888899999999999998875443 3221 1 2234455567
Q ss_pred CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecc--cC---Ccee
Q psy15191 108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC--HQ---LTIT 181 (312)
Q Consensus 108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~--~~---~~v~ 181 (312)
++.+.+||..+.+ .+.+++.. +. -..++ ++++.|+.+..++.+.+ |..+.+....+.- +. ..++
T Consensus 115 ~~~v~V~D~~Tl~--~~~ti~~~---~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 115 EGLLFTWSGMPPQ--RERTTRYS---GE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp SCEEEEEETTTTE--EEEEEECS---SC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CCEEEEEECCcCc--EEEEEeCC---Cc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence 8899999998843 34444421 11 13344 56788887777888888 9999988887662 11 2456
Q ss_pred EEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCC------CcccceeeEEEEEcCCCceEEEec
Q psy15191 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT------NGVHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
.+.|. +|..++..-.+..|.+.|.++++.+..+...... ......-.+.+|++|+++.|+..+
T Consensus 185 eLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 185 ELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 77876 7765555556889999999999988887754110 011224578999999876555443
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.84 E-value=4.2e-06 Score=66.98 Aligned_cols=219 Identities=13% Similarity=0.067 Sum_probs=123.8
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------------------cccccCCCCCc
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------------------PYHMRDDSKQL 100 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------------------~~~~~~~~~~~ 100 (312)
....+++|.++ ++++.++..++.|..|+..++.... +..+...++..
T Consensus 19 ~~p~~i~~d~~------g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 19 YAPNSFTFDST------NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp SCCCCEECCTT------CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred CCceEEEEcCC------CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 34566777776 7777788888889988876543211 11112233122
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC-CCCeEEEeec-----------------CCeEEE
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP-RGDYIIAHGF-----------------QGSLHL 162 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-----------------~~~i~~ 162 (312)
.|+.+...+.|..+|..+.....+.... .......+..+++.+ +|+..++-.. ++.+..
T Consensus 93 ~l~v~d~~~~i~~~d~~~g~~~~~~~~~---~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 93 QLYIVDCYYHLSVVGSEGGHATQLATSV---DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp EEEEEETTTEEEEECTTCEECEEEESEE---TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred cEEEEECCCCEEEEeCCCCEEEEecccC---CCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 4555544455778876643221111110 001123467899999 8987665432 244554
Q ss_pred -ecccCceeeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 163 -DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 163 -d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
|..+.+...... .......++++|+++.|+.+ +.++.|..|++.... ....+.. ... ...+++.++|
T Consensus 170 ~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-------~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 170 YDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-------IPN-PGNIKRNADG 240 (322)
T ss_dssp EETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-------CSS-EEEEEECTTS
T ss_pred EeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-------CCC-CCCeEECCCC
Confidence 665544332222 12345679999999866555 556899999987532 1222221 112 6679999999
Q ss_pred ceEEEecc----------CCeEEEEecCCCCCCcccccccccceeEEeecc----CcceeEEEeccCCCeEEEE
Q psy15191 239 RYFLTISR----------DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGH----GYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 239 ~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~ 298 (312)
++.++... .+.|..+|.... .+..+... ...+..+++ .+++++++.
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~G~-------------~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~ 300 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEFGN-------------ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGT 300 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTTSC-------------EEEEEECCTTTTTSCCCEEEE-ETTEEEEEC
T ss_pred CEEEEecCcccccccCCCccEEEEECCCCC-------------EEEEEECCCCCccccceEEEE-eCCEEEEee
Confidence 87776654 456777765321 33334332 234666766 466666665
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=1.2e-06 Score=70.32 Aligned_cols=201 Identities=15% Similarity=0.057 Sum_probs=118.8
Q ss_pred ceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCcc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTL 137 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 137 (312)
..+..++.++.|..+|.. ++..- .......+++ .+..++.++.|..+|.. ++..+... ....
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~-------~~~~ 177 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFK-------TNDA 177 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEE-------CSSC
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEe-------cCCC
Confidence 356677778888888877 44310 0111112233 57778888999999987 44332222 1223
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.+.++...+++..++. + .+...+| .+.+...........+.++...+++. |..++.++.+..+|. +.+....+..
T Consensus 178 ~~~~~~~d~~g~l~v~-t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFG-S-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp CCSCCEECTTCCEEEE-S-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred ceeeeEEcCCCEEEEE-e-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC
Confidence 4566777777775554 4 5555557 55555555544456688888888875 555677888888874 3455444432
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEE
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS 297 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 297 (312)
. ...+..+...+++. |..++.+|.|..+|. ++. .+..+......+.++...++|++++
T Consensus 253 ~-------~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~------------~~~~~~~~~~~~~~~~~d~~g~l~~- 310 (330)
T 3hxj_A 253 G-------KRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGT------------EKWNFETGSWIIATPVIDENGTIYF- 310 (330)
T ss_dssp S-------SCCCSCCEECTTSC-EEEECTTCEEEEECT-TSC------------EEEEEECSSCCCSCCEECTTCCEEE-
T ss_pred C-------CCccccceEcCCCe-EEEecCCCCEEEECC-CCc------------EEEEEEcCCccccceEEcCCCEEEE-
Confidence 1 11223345555554 556777888999985 331 2333333455677788878887554
Q ss_pred EecCCC
Q psy15191 298 ACKATK 303 (312)
Q Consensus 298 ~s~d~~ 303 (312)
++.+|.
T Consensus 311 gt~~G~ 316 (330)
T 3hxj_A 311 GTRNGK 316 (330)
T ss_dssp ECTTSC
T ss_pred EcCCCe
Confidence 644433
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=2.5e-07 Score=75.06 Aligned_cols=75 Identities=11% Similarity=0.008 Sum_probs=58.0
Q ss_pred EEECCCCCeEEEeec----------CCeEEEecccCceeeeecccCCceeEEEECCCCCE-EEEEe-cCCeEEEEEccCC
Q psy15191 142 CKFGPRGDYIIAHGF----------QGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTH-LVSVS-RDRRWGLYKRQSS 209 (312)
Q Consensus 142 ~~~~~~~~~l~~~~~----------~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-~d~~i~~wd~~~~ 209 (312)
++++|+++.++++.. ++...+|..+.+.+..+... .....|+|+|||++ +++.. .++.|.++|+.+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 689999998887543 24443499999988887633 36889999999984 55555 5899999999998
Q ss_pred CeEEEEec
Q psy15191 210 GRLSLVAC 217 (312)
Q Consensus 210 ~~~~~~~~ 217 (312)
+.+..+..
T Consensus 348 kvv~~I~v 355 (368)
T 1mda_H 348 QDQSSVEL 355 (368)
T ss_dssp EEEEECCC
T ss_pred cEEEEEEC
Confidence 88877763
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.81 E-value=5.8e-07 Score=68.37 Aligned_cols=188 Identities=12% Similarity=0.114 Sum_probs=113.5
Q ss_pred CceEEEEeCCC--cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeec
Q psy15191 99 QLHLLSCSMDK--SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLP 174 (312)
Q Consensus 99 ~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~ 174 (312)
+.++.+.+.+| .|+.+|+.+++.. ...... .........+++..|+... .++.+.+ |..+.+.+..+.
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~--~~~~l~------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTL--QQIELG------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEE--EEEECC------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCCCceEEEEECCCCcEE--EEEecC------CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 44666777665 8999999985533 333321 1222222333455555554 5677777 999999998887
Q ss_pred ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
.. . ....+++|++.|+.+..++.|.++|..+.+....+....... .-..++.+.|. +|++.+..-.++.|.+.|
T Consensus 125 ~~-~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~--~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 125 YD-G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE--ELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp CS-S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred CC-C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc--cccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 32 2 223334577777777778889999999988887776532110 11234567776 787777666788999999
Q ss_pred cCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
..++..........+.+............+.+||+|+++.|...++
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9887532211110000000000011235689999998877766654
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=2.2e-05 Score=62.31 Aligned_cols=230 Identities=10% Similarity=-0.029 Sum_probs=125.1
Q ss_pred CceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc------ccccccCCCCCceEEEEeCCC-
Q psy15191 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY------LPYHMRDDSKQLHLLSCSMDK- 109 (312)
Q Consensus 37 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~- 109 (312)
.+.+..+... .....++|.++ ++++++-..++.|..+|....... .+..+...+++.++++.....
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~------g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPD------GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADS 94 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTT------SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred ceEeEeCCCC-CCcceEEECCC------CCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCc
Confidence 3455555432 45778888887 777777667788888876543221 112223355665554443322
Q ss_pred -cEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCc--eeee-------e-cccC
Q psy15191 110 -SIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK--QIQT-------L-PCHQ 177 (312)
Q Consensus 110 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~--~~~~-------~-~~~~ 177 (312)
.|..++..+++...+... . .......++..+++..+++-..++.|.. |..+.+ .... . ...-
T Consensus 95 ~~v~~~d~~~g~~~~~~~~-----~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 95 IPVVSLVKSDGTVETLLTL-----P-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp CEEEEEECTTSCEEEEEEC-----T-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred ceEEEEcCCCCeEEEEEeC-----C-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 366666655432211111 1 1122344555555544444445777776 655321 1100 0 0111
Q ss_pred CceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCe---EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191 178 LTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGR---LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 253 (312)
...+.+ +|+++.|+.+ ...+.|..+|+..... ...+. .......++++++|+++++....+.|.++
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--------~~~~P~gi~vd~dG~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--------EQTNIDDFAFDVEGNLYGATHIYNSVVRI 238 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--------ESCCCSSEEEBTTCCEEEECBTTCCEEEE
T ss_pred CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--------ccCCCCCeEECCCCCEEEEeCCCCeEEEE
Confidence 234455 7888766555 4568899999874211 11111 11234568999999988877778889999
Q ss_pred ecCCCCCCcccccccccceeEEeeccCcceeEEEec---cCCCeEEEEec
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAAS---HDGTLLASACK 300 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~s~ 300 (312)
|.. +.. ..+..+.......++++|. |+++.|..++.
T Consensus 239 ~~~-G~~----------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 239 APD-RST----------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTT-CCE----------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCC-CCE----------EEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 864 210 0121222233567899998 88766665544
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=5.4e-06 Score=62.50 Aligned_cols=189 Identities=8% Similarity=0.041 Sum_probs=121.4
Q ss_pred ceEEEEcccc--CcEEEEEEecCcCcCCCCceEEEecCCC--cEEEeeecCCcccccccccCC-------C-CCceEEEE
Q psy15191 38 KVLYTLTNHK--SKVMAVKWVLNTSLDPEHKDLVSCSLDK--TAILWKYVSEGNYLPYHMRDD-------S-KQLHLLSC 105 (312)
Q Consensus 38 ~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~dg--~i~vw~~~~~~~~~~~~~~~~-------~-~~~~l~~~ 105 (312)
+.+.++ .|. .-...+.|+++ .++.+.+.+| .|+.+|+.+++.......+.. . .+...+..
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~~-------~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLRG-------HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEETT-------EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred EEEEEc-CCCCccccccEEEECC-------EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE
Confidence 345566 354 33668888754 6677777754 899999999887433222211 1 22344556
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccC-----Cc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQ-----LT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~-----~~ 179 (312)
..++.+.+||..+. ..+.+++.. + .-..++ +++..|+.+..++.+.+ |..+.+....+.-.. ..
T Consensus 82 w~~~~v~v~D~~tl--~~~~ti~~~---~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 82 WRNHEGFVYDLATL--TPRARFRYP---G---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp SSSSEEEEEETTTT--EEEEEEECS---S---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred eeCCEEEEEECCcC--cEEEEEeCC---C---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 67899999999884 334444421 1 123444 56777777667888888 999998887776221 34
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc------ccceeeEEEEEcCCCceEEEec
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG------VHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
++.+.+. +|+.++..-.+..|.+.|.++++.+..+........ ....-.+.+|++|+++.|+..+
T Consensus 152 lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 152 LNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5667775 676555555678999999999998888775422110 1234578999999876555444
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=3.5e-06 Score=64.14 Aligned_cols=186 Identities=10% Similarity=0.006 Sum_probs=114.1
Q ss_pred CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeeccc
Q psy15191 99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLPCH 176 (312)
Q Consensus 99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~~~ 176 (312)
+.++.+.+.+|.|+++|+++++..... .. . ..-...+++ +++.|+. .-.++.+.+ |..+.+.+..+...
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-----~-~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RL-----G-NIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-EC-----T-TCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-----C-CcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 457778888889999999986543322 11 1 111123444 3444444 445677777 99999999888732
Q ss_pred CCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 177 QLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
..-..++ +|++.|+.+..++.|.++|..+.+....+....... .-..++.+.|. +|++.+..-.++.|.+.|..
T Consensus 136 -~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~--~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 136 -GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ--PVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp -SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred -CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc--ccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 2223444 577888887778999999999988887776533111 11235677777 77777766678899999998
Q ss_pred CCCCCcccccccccceeEE-eeccCcceeEEEeccCCCeEEEEe
Q psy15191 257 EPPTEEDLVQNTLWPEVQK-LYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
++.....+.-..+.+.... ........+.||++|+++.|...+
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 8753221110000000000 001124578999999876555553
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.73 E-value=1.4e-06 Score=69.79 Aligned_cols=191 Identities=12% Similarity=-0.004 Sum_probs=111.6
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccccccC------CCCCceEEEE
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRD------DSKQLHLLSC 105 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~------~~~~~~l~~~ 105 (312)
|+ .+++.+..+..+...+.++...++ +. |..++.+ |..+|. +++..-...... .-.+..+..+
T Consensus 45 ~d-~~g~~~~~~~~~~~~~~~~~~~~~------g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~ 113 (330)
T 3hxj_A 45 IN-TDGSVKWFFKSGEIIECRPSIGKD------GT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVT 113 (330)
T ss_dssp EC-TTSCEEESSCGGGEEEECCEETTT------TE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEE
T ss_pred EC-CCCcEEEEEecCCCcccceEEecC------Cc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEE
Confidence 55 566666655544445566665544 54 5555544 777875 333211000000 0013467788
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
+.++.|..+|.. ++..+... .....+.++...+++. ++.++.++.+.. |.. .+...........+.++.
T Consensus 114 t~~~~l~~~d~~-g~~~~~~~-------~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKWRFK-------TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEE-------CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred ecCCEEEEEcCC-CCEEEEEc-------CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 888999999987 44333222 1222355566777776 555666666666 666 555555554455677788
Q ss_pred ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
..+++..++ ++ +.|..+| .+.+....... ....+.++...++|.+.+ ++.++.|..+|.
T Consensus 184 ~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~-------~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~ 242 (330)
T 3hxj_A 184 IGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYA-------GYWTVTRPAISEDGTIYV-TSLDGHLYAINP 242 (330)
T ss_dssp ECTTCCEEE-ES--SSEEEEC-TTSCEEEEECC-------SSCCCSCCEECTTSCEEE-EETTTEEEEECT
T ss_pred EcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEcc-------CCcceeceEECCCCeEEE-EcCCCeEEEECC
Confidence 878887554 44 8899999 55555544432 224466778888876544 556777888863
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.72 E-value=4.9e-06 Score=73.45 Aligned_cols=179 Identities=14% Similarity=0.115 Sum_probs=108.1
Q ss_pred EEEeCCCCceEEEEccccCcE-----------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc-------
Q psy15191 30 VKWNGEGGKVLYTLTNHKSKV-----------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY------- 91 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~v-----------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------- 91 (312)
.++|..+|+.+.++....... ..+.+. +..++.++.|+.|..+|..+++..-..
T Consensus 79 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~ 150 (668)
T 1kv9_A 79 IAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--------GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK 150 (668)
T ss_dssp EEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--------BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS
T ss_pred EEEECCCChhceEECCCCCccccccccccCCccceEEE--------CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC
Confidence 347888999988886432210 111221 346778888999999999888762110
Q ss_pred --cccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccC------------------------CCcc
Q psy15191 92 --HMRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVG------------------------GNTL 137 (312)
Q Consensus 92 --~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~~~~ 137 (312)
.....+ .+..++.+.. ++.|..+|.++++..+.......... ....
T Consensus 151 ~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~ 230 (668)
T 1kv9_A 151 PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGT 230 (668)
T ss_dssp SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECC
T ss_pred cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCc
Confidence 111111 1234555543 58899999999777665432110000 0011
Q ss_pred ceeEEEECCCCCeEEEeecCCe-------------------EEE-ecccCceeeeecc--cC-------CceeEEEECCC
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGS-------------------LHL-DVTTWKQIQTLPC--HQ-------LTITQLAFSPD 188 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~-------------------i~~-d~~~~~~~~~~~~--~~-------~~v~~~~~~~~ 188 (312)
....+++.|+...++.+..++. |.- |.++++.+-.++. |. .+.....+..+
T Consensus 231 ~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~ 310 (668)
T 1kv9_A 231 VWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNID 310 (668)
T ss_dssp CCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccC
Confidence 1224688888888888876653 444 8888888776652 21 22222222235
Q ss_pred CC---EEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191 189 DT---HLVSVSRDRRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 189 ~~---~l~~~~~d~~i~~wd~~~~~~~~~~~ 216 (312)
|+ .++.++.+|.++++|..+++.+....
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 65 68889999999999999988775443
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.64 E-value=6.7e-06 Score=72.59 Aligned_cols=142 Identities=13% Similarity=0.079 Sum_probs=86.0
Q ss_pred cEEEEcCCCCcceeeeeeeecccCC--CccceeEEEECCCCC---eEEEeecCCeEEE-ecccCceeeeecccC------
Q psy15191 110 SIIVWAPDPTTGLWLETARVGEVGG--NTLGFYGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ------ 177 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~------ 177 (312)
.|..+|.++++..+........... ...++....+..+|+ .++.++.+|.+++ |..+++++.......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 3899999997766655432110000 012222222233564 6888889999998 888888763322100
Q ss_pred ------C------------------------ceeEEEECCCCCEEEEEe-------------------------------
Q psy15191 178 ------L------------------------TITQLAFSPDDTHLVSVS------------------------------- 196 (312)
Q Consensus 178 ------~------------------------~v~~~~~~~~~~~l~~~~------------------------------- 196 (312)
. .-..++++|+...++...
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 0 011267777766655421
Q ss_pred -----cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 197 -----RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 197 -----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.+|.|..||+.+++..-..... .+.....+...+.+++.++.||.|+.||..++.
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~--------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYP--------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEES--------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCC--------CCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 2378999999988876655532 112223344467788889999999999998874
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.62 E-value=2.1e-05 Score=59.34 Aligned_cols=188 Identities=12% Similarity=-0.007 Sum_probs=111.3
Q ss_pred CceEEEEeCC--CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeec
Q psy15191 99 QLHLLSCSMD--KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLP 174 (312)
Q Consensus 99 ~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~ 174 (312)
+.++.+.+.+ ..|+.+|+.+++.. ...... .. .--..+++ .+..|+. .-.++.+.+ |..+.+.+..+.
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~--~~~~l~---~~-~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRIL--QRAEVP---PP-YFGAGIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEE--EEEECC---TT-CCEEEEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred CEEEEECCCCCCceEEEEECCCCCEE--EEEeCC---CC-cceeEEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEe
Confidence 3355666665 48999999985533 333211 11 11122333 3444444 446777777 999999999887
Q ss_pred ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
.. ..-..++ +++..|+.+..++.|.++|..+.+....+....... .-..++.+.+. +|+.++..-.+..|.+.|
T Consensus 103 ~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~--~~~~lNeLe~~-~G~lyanvw~s~~I~vID 176 (243)
T 3mbr_X 103 YP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR--PLDNLNELEWV-NGELLANVWLTSRIARID 176 (243)
T ss_dssp CS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTTTEEEEEC
T ss_pred CC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc--ccccceeeEEe-CCEEEEEECCCCeEEEEE
Confidence 32 2223444 567777777778999999999988887776532111 11235667766 777776666788999999
Q ss_pred cCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEEec
Q psy15191 255 LGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
..++..........+.+..... .......+.+|++|+++.|...++
T Consensus 177 p~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 177 PASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9888532221111000000000 011235789999998766665543
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=9.6e-05 Score=57.29 Aligned_cols=145 Identities=8% Similarity=-0.062 Sum_probs=86.1
Q ss_pred CceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeeccc
Q psy15191 99 QLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCH 176 (312)
Q Consensus 99 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~ 176 (312)
+..+++-..++.|..+++....... .. ......+..+++++++..++.+. ..+.|.+ +.............
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~~~---~~----~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~ 120 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEPTT---II----RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG 120 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEE---EE----CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred CEEEEEECCCCEEEEEecCCCCcEE---EE----ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence 3344555567789999887533211 11 11224578899999766655544 4567766 55432222222212
Q ss_pred CCceeEEEECCCCCEEEEEec---CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEE
Q psy15191 177 QLTITQLAFSPDDTHLVSVSR---DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVV 252 (312)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~i 252 (312)
......++++|++..|+.+.. .+.|..+++........... .......++++|++..| ++-...+.|.+
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-------~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-------NLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-------TCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC-------CCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 245789999997665555543 46888888864433222211 22346789999987655 45556789999
Q ss_pred EecCC
Q psy15191 253 WGLGE 257 (312)
Q Consensus 253 wd~~~ 257 (312)
+|+..
T Consensus 194 ~~~~g 198 (267)
T 1npe_A 194 LNPAQ 198 (267)
T ss_dssp EETTE
T ss_pred EecCC
Confidence 99864
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.56 E-value=6.1e-06 Score=72.84 Aligned_cols=247 Identities=12% Similarity=0.011 Sum_probs=127.7
Q ss_pred EEEEeCCCCce--EEEEc-cccCcEEEEEEecCcCcCCCCceEEEecC-CCcEEEeeecCCcccccccc---------cC
Q psy15191 29 AVKWNGEGGKV--LYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSL-DKTAILWKYVSEGNYLPYHM---------RD 95 (312)
Q Consensus 29 ~~~w~~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~---------~~ 95 (312)
...||+.+++- +..+. .+.....++++..+ +++++.|+. +..+.+||..+.....+..+ ..
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~------g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN------GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTT------SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCCCC------CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 34588877642 22232 12223334566666 889999984 45799999887653211111 11
Q ss_pred CCCCceEEEEe-CC-----CcEEEEcCCCCcceeeeee--eecccCCCccceeEEEECCCCCeEEEeecCCeEE------
Q psy15191 96 DSKQLHLLSCS-MD-----KSIIVWAPDPTTGLWLETA--RVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH------ 161 (312)
Q Consensus 96 ~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~------ 161 (312)
-+++..++.|+ .+ ..+.+||..+.+ +.... ....+..... ...+..++..++.++.+|.+.
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred ecCCeEEEEeCcccCCcccccceEeCCCCCc--ceeCCCccccccccccc---cceeecCCceEEEECCCCcEEEecCcc
Confidence 23566777777 34 568899988743 32210 0011111110 012334566666666665543
Q ss_pred ---E-ecccCceeeeecccC---------CceeEEEEC-CCCCEEEEEecCC-----------eEEEEEccCCCeEEEEe
Q psy15191 162 ---L-DVTTWKQIQTLPCHQ---------LTITQLAFS-PDDTHLVSVSRDR-----------RWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 162 ---~-d~~~~~~~~~~~~~~---------~~v~~~~~~-~~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~~ 216 (312)
. |..+..-......+. ..-..+.|. .+++.++.|+.++ .+.+||..+..-.....
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 449 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS 449 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc
Confidence 2 333222111111111 122334443 3677888887543 67788877655333220
Q ss_pred ccCCCCcccceeeEEEEEcCCCceEEEeccC-----------CeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285 (312)
Q Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (312)
.... ....-.+++..|++++++.|+.+ ..+.+||..+. .|..+..+.........
T Consensus 450 ~~mp----~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~----------~W~~~~~~~~~R~~hs~ 515 (656)
T 1k3i_A 450 NGLY----FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD----------TFYKQNPNSIVRVYHSI 515 (656)
T ss_dssp TCCS----SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT----------EEEECCCCSSCCCTTEE
T ss_pred CCCC----CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC----------ceeecCCCCCccccccH
Confidence 1110 11112345667899999999864 46888987653 23333322222222234
Q ss_pred EEeccCCCeEEEEec
Q psy15191 286 LAASHDGTLLASACK 300 (312)
Q Consensus 286 ~~~s~~~~~l~s~s~ 300 (312)
..+.|+|++++.||.
T Consensus 516 a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 516 SLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEECTTSCEEEEECC
T ss_pred hhcCCCcEEEecCCC
Confidence 456799999999974
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.56 E-value=4.9e-05 Score=60.75 Aligned_cols=186 Identities=13% Similarity=0.025 Sum_probs=104.1
Q ss_pred CCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeec------------ccCCCccceeEEEECC-CCCeEEEeecCCeEE
Q psy15191 95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG------------EVGGNTLGFYGCKFGP-RGDYIIAHGFQGSLH 161 (312)
Q Consensus 95 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~ 161 (312)
..+++.+++++..++.|..|+..+.+.......... ........+..+++.+ +++++++....+..+
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~ 105 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSV 105 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEE
Confidence 345666678888889999998876332111100000 0000113478899998 565444433444334
Q ss_pred EecccCceeeee---cc-cCCceeEEEECC-CCCEEEEEec-----------------CCeEEEEEccCCCeEEEEeccC
Q psy15191 162 LDVTTWKQIQTL---PC-HQLTITQLAFSP-DDTHLVSVSR-----------------DRRWGLYKRQSSGRLSLVACSD 219 (312)
Q Consensus 162 ~d~~~~~~~~~~---~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~ 219 (312)
+|..+....... .+ .......+++.+ +|+..++-.. ++.|..+|..+.+......
T Consensus 106 ~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--- 182 (322)
T 2fp8_A 106 VGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--- 182 (322)
T ss_dssp ECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE---
T ss_pred EeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc---
Confidence 465543322111 11 123468899999 9987766432 3678888876544322222
Q ss_pred CCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 220 KTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
.......++++|++++|+.+ ...+.|.+|++....... .+.+..+ .+ ...+++.++|+++++.
T Consensus 183 -----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-------~~~~~~~---~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 183 -----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-------AEVLVKI---PN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp -----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-------EEEEEEC---SS-EEEEEECTTSCEEEEE
T ss_pred -----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-------cceEEeC---CC-CCCeEECCCCCEEEEe
Confidence 11234579999999865544 667899999987532110 0111111 22 6778899998877765
Q ss_pred e
Q psy15191 299 C 299 (312)
Q Consensus 299 s 299 (312)
.
T Consensus 247 ~ 247 (322)
T 2fp8_A 247 S 247 (322)
T ss_dssp E
T ss_pred c
Confidence 3
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.52 E-value=0.00052 Score=62.03 Aligned_cols=227 Identities=10% Similarity=0.043 Sum_probs=127.7
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------cccccCCCCCceEEEEeCCCcE
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSMDKSI 111 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~d~~i 111 (312)
...|.++...++ +.+.+ |..++-+..||..+++... +..+...+++ .+..|+.+ -|
T Consensus 214 ~~~i~~i~~d~~------g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~-Gl 284 (795)
T 4a2l_A 214 TKQIQAILQQSP------TRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQN-RLWIGTFN-DL 284 (795)
T ss_dssp CCCEEEEEEEET------TEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTS-CEEEEESS-CE
T ss_pred CCeeEEEEEcCC------CCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCC-CEEEEeCC-hh
Confidence 456788877666 65544 4444348888876543211 1112223334 34455555 58
Q ss_pred EEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CCeEEEecccCceeeeec------ccCCceeEEE
Q psy15191 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QGSLHLDVTTWKQIQTLP------CHQLTITQLA 184 (312)
Q Consensus 112 ~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~d~~~~~~~~~~~------~~~~~v~~~~ 184 (312)
.+|+..+.+.............-....|.++...++|..- .|+. .|..+++..+.....-.. -....|.++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV 363 (795)
T ss_dssp EEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred heEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence 8888776432211111000111134569999999988754 4555 555555544333221111 1245689999
Q ss_pred ECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccC-CCC-cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191 185 FSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSD-KTN-GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 185 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
..++|+ |..|+.++-|..||..+..... +.... ... ......|.+++..+++++|..|+.++-|..||..++.
T Consensus 364 ~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--- 438 (795)
T 4a2l_A 364 EDKDKN-LWIGTNDGGLNLYNPITQRFTS-YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--- 438 (795)
T ss_dssp ECTTSC-EEEEESSSCEEEECTTTCCEEE-ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC---
T ss_pred ECCCCC-EEEEECCCCeEEEcCCCCcEEE-EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc---
Confidence 988887 5567778789999987654332 22111 000 0123568899998888845556666679999977652
Q ss_pred ccccccccceeEEee-----ccCcceeEEEeccCCCeEEEE
Q psy15191 263 DLVQNTLWPEVQKLY-----GHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~ 298 (312)
...+. .+...|.++...++|.+.+..
T Consensus 439 ----------~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 439 ----------VENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp ----------EEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred ----------EEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 22221 124568888888888766654
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.50 E-value=0.00017 Score=62.36 Aligned_cols=183 Identities=9% Similarity=0.052 Sum_probs=104.2
Q ss_pred CCceEEEEEeC-CCCceEEEEccccCc-E----------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--
Q psy15191 24 KSKVMAVKWNG-EGGKVLYTLTNHKSK-V----------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-- 89 (312)
Q Consensus 24 ~~~v~~~~w~~-~~~~~~~~~~~h~~~-v----------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-- 89 (312)
.+.|.+ +|. .+|+.+.++...... + ..+.. . +..++.++.|+.+..+|..+++..-
T Consensus 72 ~~~v~A--lD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 72 PNNTYA--LNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--G------AGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTCEEE--EETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--E------TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEE--EeCCCCccEEEEEcCCCCccccccccccccccccEE--E------CCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 345544 578 789888887533210 0 11122 1 3467777889999999998887621
Q ss_pred -cc------cccCCC--CCceEEEEeC------CCcEEEEcCCCCcceeeeeeeecccC---------------------
Q psy15191 90 -PY------HMRDDS--KQLHLLSCSM------DKSIIVWAPDPTTGLWLETARVGEVG--------------------- 133 (312)
Q Consensus 90 -~~------~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~--------------------- 133 (312)
.. .....+ .+..++.++. ++.|..+|.++++..+..........
T Consensus 142 ~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~ 221 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGT 221 (571)
T ss_dssp ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHH
T ss_pred cCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccccc
Confidence 00 111111 1235566554 78999999999776664432211000
Q ss_pred ----------CCccceeEEEECCCCCeEEEeecC----------------CeEEE-ecccCceeeeecc--cC-------
Q psy15191 134 ----------GNTLGFYGCKFGPRGDYIIAHGFQ----------------GSLHL-DVTTWKQIQTLPC--HQ------- 177 (312)
Q Consensus 134 ----------~~~~~v~~~~~~~~~~~l~~~~~~----------------~~i~~-d~~~~~~~~~~~~--~~------- 177 (312)
+.......+++.++...++.+..+ +.+.- |.++++.+-.++. |.
T Consensus 222 ~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~ 301 (571)
T 2ad6_A 222 KTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGV 301 (571)
T ss_dssp HTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCC
T ss_pred ccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccC
Confidence 000001235666766666665532 13443 8888887766652 11
Q ss_pred -CceeEEEECCCCC---EEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 178 -LTITQLAFSPDDT---HLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 178 -~~v~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.++ -+...++|+ .++.++.+|.++++|..+++.+.....
T Consensus 302 ~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 302 NQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 111 122224674 577788999999999999888766553
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.48 E-value=6.7e-05 Score=64.94 Aligned_cols=141 Identities=10% Similarity=0.011 Sum_probs=85.0
Q ss_pred cEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEECCCCC---eEEEeecCCeEEE-ecccCceeeeecccC-----
Q psy15191 110 SIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFGPRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ----- 177 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~----- 177 (312)
.|..+|.++++..+........ ......++. +...++|+ .++.++.+|.+.. |..+++++-...-..
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 5889999987766554432110 001112221 22224674 5677888898888 888887765543111
Q ss_pred --------Cce--------------------------eEEEECCCCCEEEEEe---------------------------
Q psy15191 178 --------LTI--------------------------TQLAFSPDDTHLVSVS--------------------------- 196 (312)
Q Consensus 178 --------~~v--------------------------~~~~~~~~~~~l~~~~--------------------------- 196 (312)
.++ ..++++|+..+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 011 2467888777776653
Q ss_pred ----------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 197 ----------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 197 ----------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.+|.|..||+.+++..-...... .+....+...+..++.++.||.|+.+|..++.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--------CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCC--------CccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 24789999998888766655321 11112222245667778999999999998874
No 258
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.47 E-value=0.00021 Score=54.63 Aligned_cols=204 Identities=10% Similarity=0.111 Sum_probs=118.5
Q ss_pred EEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc---------ccCCCCCceEEEEeCCCcEE
Q psy15191 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH---------MRDDSKQLHLLSCSMDKSII 112 (312)
Q Consensus 42 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---------~~~~~~~~~l~~~~~d~~i~ 112 (312)
.+.+-.+.+..++|.|+ . +.+++....++.|...|.. ++...... .....++.++++.-.++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~----~-~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ----S-NTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp ECTTCCSCEEEEEEETT----T-TEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred ECCCcccCcceeEEeCC----C-CEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 45566678999999987 1 3445556667788888876 44322111 11134454556655677888
Q ss_pred EEcCCCCccee-eeeeeecc-cCCCccceeEEEECCCCCeEEEeecCCeEEE---e--cccCceeeeec-------ccCC
Q psy15191 113 VWAPDPTTGLW-LETARVGE-VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL---D--VTTWKQIQTLP-------CHQL 178 (312)
Q Consensus 113 i~d~~~~~~~~-~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---d--~~~~~~~~~~~-------~~~~ 178 (312)
++++....... ........ ....+.....++|+|.++.|+++.......+ + ....++ .... .+..
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l-~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL-HISKDKALQRQFTLD 173 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC-EEEECHHHHHTCCSS
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce-eeecchhhccccccC
Confidence 88876644211 12222111 1234556899999999988887776655444 2 011111 1110 1234
Q ss_pred ceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCc--ccceeeEEEEEcCCCceEEEeccCCeEEEEe
Q psy15191 179 TITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNG--VHKRIIWGVAWSHDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 179 ~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 254 (312)
.+..++++|. +.+++....++.+..+|.. ++....+........ ..-.....|+|.++|++.++ ++-+.++++.
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 5789999995 4555666677889999977 445555443321100 01235678999999985555 7777666664
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.46 E-value=0.00077 Score=60.95 Aligned_cols=222 Identities=6% Similarity=-0.053 Sum_probs=129.3
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc---------------cccccCCCCCceEEEEeCCCcEE
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL---------------PYHMRDDSKQLHLLSCSMDKSII 112 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~d~~i~ 112 (312)
..|.++...++ |.+.+ |..+ -|.+||..++.... +..+....++ .+..|+.++-|.
T Consensus 263 ~~i~~i~~d~~------g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~lWigt~~~Gl~ 333 (795)
T 4a2l_A 263 NYIRSLAMDSQ------NRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-GMWLGTYFGGLN 333 (795)
T ss_dssp SBEEEEEECTT------SCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-CEEEEESSSCEE
T ss_pred CeEEEEEEcCC------CCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-CEEEEECCCCeE
Confidence 56888877666 65444 4444 48888876544311 1111122333 466677777788
Q ss_pred EEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-CeEEEecccCceeeeec--------ccCCceeEE
Q psy15191 113 VWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-GSLHLDVTTWKQIQTLP--------CHQLTITQL 183 (312)
Q Consensus 113 i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~d~~~~~~~~~~~--------~~~~~v~~~ 183 (312)
.++..+........... .-.-....|.++...++|.+ .+|+.+ |..+++..+.....-.. .....|.++
T Consensus 334 ~~~~~~~~~~~~~~~~~-~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 411 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPY-KNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV 411 (795)
T ss_dssp EECGGGGSSEEECCCTT-SSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEE
T ss_pred EeCCCcccceEEcCCCC-CCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE
Confidence 88765432111111000 00112346889998888874 456655 55555655444332211 123578999
Q ss_pred EECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcc
Q psy15191 184 AFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEED 263 (312)
Q Consensus 184 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 263 (312)
...++++.|..|+.++-|..+|..+.+.. .+...... .....|.++...++|.+.+... +| |.+||..++.
T Consensus 412 ~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~--l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~---- 482 (795)
T 4a2l_A 412 YVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQ--LVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRS---- 482 (795)
T ss_dssp EEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSC--CSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTE----
T ss_pred EEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCC--cCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCe----
Confidence 99888885677788788999998865533 33221111 1345689999998888776554 55 8888876541
Q ss_pred cccccccceeEEee-------ccCcceeEEEeccCCCeEEEE
Q psy15191 264 LVQNTLWPEVQKLY-------GHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 264 ~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~ 298 (312)
...+. -....|.++...++|.+.+..
T Consensus 483 ---------~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 483 ---------FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp ---------EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred ---------EEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 11111 123568888888888876655
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.43 E-value=8.5e-05 Score=64.42 Aligned_cols=142 Identities=9% Similarity=0.018 Sum_probs=82.7
Q ss_pred CcEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEEC-CCC---CeEEEeecCCeEEE-ecccCceeeeeccc----
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFG-PRG---DYIIAHGFQGSLHL-DVTTWKQIQTLPCH---- 176 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-~~~---~~l~~~~~~~~i~~-d~~~~~~~~~~~~~---- 176 (312)
+.|..+|.++++..+..+..... +.....++. +... .+| +.++.++.+|.+.. |.++++++-.....
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 356 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN 356 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence 37899999987766654432110 001112221 2222 467 45777889999888 88888876544311
Q ss_pred --------C-Cce--------------------------eEEEECCCCCEEEEEe-------------------------
Q psy15191 177 --------Q-LTI--------------------------TQLAFSPDDTHLVSVS------------------------- 196 (312)
Q Consensus 177 --------~-~~v--------------------------~~~~~~~~~~~l~~~~------------------------- 196 (312)
. .++ ..++++|+..++++..
T Consensus 357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 436 (599)
T 1w6s_A 357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATL 436 (599)
T ss_dssp SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccc
Confidence 0 011 2456777666555432
Q ss_pred --------------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 197 --------------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 197 --------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.+|.|..||+.+++..-...... +...-.+.-.+.+++.++.||.|+.||.+++.
T Consensus 437 ~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~--------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 437 NMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF--------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp EEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS--------CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC--------CccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 34678888888877665554211 11111112245677779999999999999984
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.39 E-value=0.00048 Score=59.77 Aligned_cols=184 Identities=9% Similarity=0.031 Sum_probs=107.2
Q ss_pred CCceEEEEEeC-CCCceEEEEccccCc-----------EEEEEEecCcCcCCCCce----EEEecCCCcEEEeeecCCcc
Q psy15191 24 KSKVMAVKWNG-EGGKVLYTLTNHKSK-----------VMAVKWVLNTSLDPEHKD----LVSCSLDKTAILWKYVSEGN 87 (312)
Q Consensus 24 ~~~v~~~~w~~-~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~~~~~~~----l~s~~~dg~i~vw~~~~~~~ 87 (312)
.+.|. ++|. .+|+.+.++...... ...+++.|. +.. ++.++.|+.+.-+|..+++.
T Consensus 72 ~~~v~--AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~------~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 72 PNNTF--ALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG------DGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp TTCEE--EEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC------CSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEE--EEeCCCCCcEEEEECCCCCccccccccccccccceEEEec------CCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 34554 4678 889998887643221 122344332 233 77788899999999888876
Q ss_pred cc---cc------cccCCC--CCceEEEEe------CCCcEEEEcCCCCcceeeeeeeecccC-----C-----------
Q psy15191 88 YL---PY------HMRDDS--KQLHLLSCS------MDKSIIVWAPDPTTGLWLETARVGEVG-----G----------- 134 (312)
Q Consensus 88 ~~---~~------~~~~~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~-----~----------- 134 (312)
.- .. .....| .+..+++++ .++.|+.+|.++++..+.......... .
T Consensus 144 ~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~ 223 (599)
T 1w6s_A 144 VWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQK 223 (599)
T ss_dssp EEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCT
T ss_pred EEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccc
Confidence 21 00 011111 123555555 378999999999777665443211100 0
Q ss_pred --------------Cccce-eEEEECCCCCeEEEeecCC----------------eEEE-ecccCceeeeecc--cC---
Q psy15191 135 --------------NTLGF-YGCKFGPRGDYIIAHGFQG----------------SLHL-DVTTWKQIQTLPC--HQ--- 177 (312)
Q Consensus 135 --------------~~~~v-~~~~~~~~~~~l~~~~~~~----------------~i~~-d~~~~~~~~~~~~--~~--- 177 (312)
....+ ..+++.++...++.+..++ .+.- |.++++.+-.++. |.
T Consensus 224 ~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd 303 (599)
T 1w6s_A 224 GLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWD 303 (599)
T ss_dssp THHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcccc
Confidence 00001 1356667777777766542 4433 9888888776652 21
Q ss_pred -----CceeEEEEC-CCC---CEEEEEecCCeEEEEEccCCCeEEEEe
Q psy15191 178 -----LTITQLAFS-PDD---THLVSVSRDRRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 178 -----~~v~~~~~~-~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~ 216 (312)
.++. +... .+| ..++.++.+|.++++|.++++.+....
T Consensus 304 ~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 304 YAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1111 2222 467 467778899999999999988876655
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.36 E-value=0.00029 Score=61.09 Aligned_cols=168 Identities=13% Similarity=0.086 Sum_probs=96.8
Q ss_pred CcEEEEcCCCCcceeeeeeeecc---cCCCccceeEEEEC-CCCC---eEEEeecCCeEEE-ecccCceeeeecccC---
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGE---VGGNTLGFYGCKFG-PRGD---YIIAHGFQGSLHL-DVTTWKQIQTLPCHQ--- 177 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-~~~~---~l~~~~~~~~i~~-d~~~~~~~~~~~~~~--- 177 (312)
+.|..+|.++++..+........ +.....++. +... .+|+ .++.++.+|.++. |.++++++-......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 57999999997776654432110 001112221 2221 4664 6778889999988 888887765443111
Q ss_pred ----------Cc--------------------------------eeEEEECCCCCEEEEEe-------------------
Q psy15191 178 ----------LT--------------------------------ITQLAFSPDDTHLVSVS------------------- 196 (312)
Q Consensus 178 ----------~~--------------------------------v~~~~~~~~~~~l~~~~------------------- 196 (312)
.+ -..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 01356677655555432
Q ss_pred --------------cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCc
Q psy15191 197 --------------RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262 (312)
Q Consensus 197 --------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 262 (312)
.+|.|..||+.+++..-...... ++..-.....+.+++.++.||.++.||.+++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~--- 518 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK--- 518 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--------CCCSCCEEETTTEEEEECTTSEEEEEETTTCC---
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--------CCcccceEeCCCEEEEECCCCcEEEEECCCCC---
Confidence 25789999999888766555321 11111111245677779999999999999884
Q ss_pred ccccccccceeEEeeccCcc-eeEEEeccCCCeEEE
Q psy15191 263 DLVQNTLWPEVQKLYGHGYE-IYSLAASHDGTLLAS 297 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s 297 (312)
.+-++...... -.-+.+..+|+..++
T Consensus 519 ---------~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 519 ---------ELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ---------EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ---------EEEEecCCCCcccCceEEEECCEEEEE
Confidence 34444432221 122667788874443
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=0.00031 Score=62.97 Aligned_cols=190 Identities=12% Similarity=-0.012 Sum_probs=103.4
Q ss_pred cEEEEEEe-cCcCcCCCCceEEEecC-C----CcEEEeeecCC-cccc------cccccCCCCCceEEEEeCC-----Cc
Q psy15191 49 KVMAVKWV-LNTSLDPEHKDLVSCSL-D----KTAILWKYVSE-GNYL------PYHMRDDSKQLHLLSCSMD-----KS 110 (312)
Q Consensus 49 ~v~~~~~~-~~~~~~~~~~~l~s~~~-d----g~i~vw~~~~~-~~~~------~~~~~~~~~~~~l~~~~~d-----~~ 110 (312)
.+...+|+ |+ |++||-+.. + .+|+++|+.++ +.+. .....+++++..|+....+ ..
T Consensus 175 ~~~~~~~S~PD------G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPE------HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTT------TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCC------CCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 67888999 88 888774432 2 35999999988 5311 1234457787777766654 35
Q ss_pred EEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC---CeEEE-ecccC--ce--eeeecccCCceeE
Q psy15191 111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ---GSLHL-DVTTW--KQ--IQTLPCHQLTITQ 182 (312)
Q Consensus 111 i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~i~~-d~~~~--~~--~~~~~~~~~~v~~ 182 (312)
|..+++.+.......... .........+.|+|||++|+....+ ..+.+ |+.+. .. ............+
T Consensus 249 v~~~~lgt~~~~~~lv~~----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYE----EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp EEEEETTSCGGGCEEEEE----CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred EEEEECCCCchhcEEEEe----cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 777888764322111111 0112235678999999998876532 34555 66654 22 2222223344555
Q ss_pred EEECCCCCEEEEEecC----CeEEEEEccCCCeEE--EEeccCCCCcccceeeEEEEEcCCCceEEEeccCCe--EEEEe
Q psy15191 183 LAFSPDDTHLVSVSRD----RRWGLYKRQSSGRLS--LVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV--CVVWG 254 (312)
Q Consensus 183 ~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--i~iwd 254 (312)
+.|+.++.+++....+ ..|..+|+.+..... .+... ....+..+.+. .+.++++...++. |++++
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~------~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS------EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC------SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC------CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 6654444444444443 256666765422211 12211 12245556665 3455666677785 44555
Q ss_pred c
Q psy15191 255 L 255 (312)
Q Consensus 255 ~ 255 (312)
+
T Consensus 398 l 398 (751)
T 2xe4_A 398 A 398 (751)
T ss_dssp C
T ss_pred c
Confidence 4
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.23 E-value=0.0011 Score=57.42 Aligned_cols=179 Identities=12% Similarity=0.117 Sum_probs=103.6
Q ss_pred EEEeCCCCceEEEEccccCcE---------EEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc---ccc------
Q psy15191 30 VKWNGEGGKVLYTLTNHKSKV---------MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY---LPY------ 91 (312)
Q Consensus 30 ~~w~~~~~~~~~~~~~h~~~v---------~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~---~~~------ 91 (312)
.++|..+|+.+.++......- ..+.+. +..++.++.|+.|.-+|..+++.. ...
T Consensus 81 ~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--------~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~ 152 (582)
T 1flg_A 81 FALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--------GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGY 152 (582)
T ss_dssp EEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--------TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTC
T ss_pred EEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--------CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCc
Confidence 446888899888876442210 111221 346777778899999998888762 000
Q ss_pred cccCCC---C----Cc-eEEEEe------CCCcEEEEcCCCCcceeeeeeeeccc-------------C-----------
Q psy15191 92 HMRDDS---K----QL-HLLSCS------MDKSIIVWAPDPTTGLWLETARVGEV-------------G----------- 133 (312)
Q Consensus 92 ~~~~~~---~----~~-~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~----------- 133 (312)
.....| + +. .+++++ .++.|..+|..+++..+........+ .
T Consensus 153 ~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~ 232 (582)
T 1flg_A 153 TMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNS 232 (582)
T ss_dssp BCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTS
T ss_pred ccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCcccc
Confidence 000111 1 11 455554 37899999999987776432210000 0
Q ss_pred ----------CCccceeEEEECCCCCeEEEeec--------------------C----CeEEE-ecccCceeeeecc--c
Q psy15191 134 ----------GNTLGFYGCKFGPRGDYIIAHGF--------------------Q----GSLHL-DVTTWKQIQTLPC--H 176 (312)
Q Consensus 134 ----------~~~~~v~~~~~~~~~~~l~~~~~--------------------~----~~i~~-d~~~~~~~~~~~~--~ 176 (312)
+....-..+++.|+...++.+.. | +.|.- |.++++.+-.++. |
T Consensus 233 ~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~ 312 (582)
T 1flg_A 233 PTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPN 312 (582)
T ss_dssp TTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTT
T ss_pred ccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCC
Confidence 00001123567777777776653 1 34544 8888888777652 2
Q ss_pred C--------CceeEEEEC-CCCC---EEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 177 Q--------LTITQLAFS-PDDT---HLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 177 ~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
. .++. +... .+|+ .++.++.+|.++++|..+++.+.....
T Consensus 313 d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 313 DAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp CCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 1 1111 1221 4664 788899999999999999888766554
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.19 E-value=0.00035 Score=62.68 Aligned_cols=151 Identities=9% Similarity=-0.007 Sum_probs=85.3
Q ss_pred cccCC-CCCceEEEEeC-CC----cEEEEcCCCC-cceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----e
Q psy15191 92 HMRDD-SKQLHLLSCSM-DK----SIIVWAPDPT-TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----S 159 (312)
Q Consensus 92 ~~~~~-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~ 159 (312)
...++ |++.+++.... +| .|+++|+.++ +... ... ......++|+||++.|+....+. .
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~--------~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV--------SGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE--------EEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc--------cCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 34557 88877765433 22 4999999885 4110 001 11134689999999888776542 3
Q ss_pred EEE-ecccCcee--eeec-ccCCceeEEEECCCCCEEEEEec---CCeEEEEEccCCC-eE--EEEeccCCCCcccceee
Q psy15191 160 LHL-DVTTWKQI--QTLP-CHQLTITQLAFSPDDTHLVSVSR---DRRWGLYKRQSSG-RL--SLVACSDKTNGVHKRII 229 (312)
Q Consensus 160 i~~-d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~-~~--~~~~~~~~~~~~~~~~v 229 (312)
|.+ ++.+.... ..+. ........+.|+|||++|+..+. ...|+++|+.+.. .. ..+... .....
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~------~~~~~ 322 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR------EKGVR 322 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC------CTTCC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC------CCCce
Confidence 555 65554321 1111 22334567899999998887653 3468888887652 22 222211 22334
Q ss_pred EEEEEcCCCceEEEeccC----CeEEEEecCC
Q psy15191 230 WGVAWSHDSRYFLTISRD----GVCVVWGLGE 257 (312)
Q Consensus 230 ~~~~~~~~~~~l~s~~~d----g~i~iwd~~~ 257 (312)
..+.|+.++.+++....+ ..|..+++..
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 455555555555555444 2666677654
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.18 E-value=0.00097 Score=55.56 Aligned_cols=142 Identities=10% Similarity=0.028 Sum_probs=82.0
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC------CeEEEecc-cCceeeee
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ------GSLHLDVT-TWKQIQTL 173 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~d~~-~~~~~~~~ 173 (312)
.|+.+...+.|+.+|..+...... ......+..++++++++ |+++... +.+.++.. .+.....+
T Consensus 154 ~Lyv~D~~~~I~~id~~~g~v~~~--------~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~ 224 (433)
T 4hw6_A 154 DLYWVGQRDAFRHVDFVNQYVDIK--------TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL 224 (433)
T ss_dssp EEEEECBTSCEEEEETTTTEEEEE--------CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE
T ss_pred EEEEEeCCCCEEEEECCCCEEEEe--------ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc
Confidence 444444447888888765332111 12334578999999999 4444431 23444222 12111111
Q ss_pred cccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce-EEEeccCCeEE
Q psy15191 174 PCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY-FLTISRDGVCV 251 (312)
Q Consensus 174 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~ 251 (312)
. .......++++| ++.++++-..++.|+.+|..+......+.... .......++|+|++++ +++-...+.|+
T Consensus 225 ~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-----~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 225 C-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-----TKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp E-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-----CCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred c-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-----CCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 1 234456789999 67766666677889999987665422222111 1112346999999984 45555678999
Q ss_pred EEecCC
Q psy15191 252 VWGLGE 257 (312)
Q Consensus 252 iwd~~~ 257 (312)
.+++..
T Consensus 299 ~~~~d~ 304 (433)
T 4hw6_A 299 RVDYNR 304 (433)
T ss_dssp EEEBCT
T ss_pred EEeCCC
Confidence 988753
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.0015 Score=58.98 Aligned_cols=218 Identities=12% Similarity=0.025 Sum_probs=123.2
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc-----------ccccccCCCCCceEEEEeCCCcEEEEcC
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY-----------LPYHMRDDSKQLHLLSCSMDKSIIVWAP 116 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 116 (312)
..|.++...++ +. |..|..++-|..++..++... .+..+...+++ .|..|+.++-|..++.
T Consensus 363 ~~v~~i~~d~~------g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~ 434 (781)
T 3v9f_A 363 KVVSSVCDDGQ------GK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNT 434 (781)
T ss_dssp SCEEEEEECTT------SC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEECS
T ss_pred cceEEEEEcCC------CC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEEcC
Confidence 45777776655 54 455555556888876543221 11112222333 4555666667888887
Q ss_pred CCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEecccCceeeeeccc-----CCceeEEEECCCCCE
Q psy15191 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCH-----QLTITQLAFSPDDTH 191 (312)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~ 191 (312)
.+.+... .... ......|.++...+++.. ..|+..|..++|..+.+........ ...|.++...++|.+
T Consensus 435 ~~~~~~~---~~~~--~~~~~~v~~i~~d~~g~l-wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 508 (781)
T 3v9f_A 435 RLKKFQI---IELE--KNELLDVRVFYEDKNKKI-WIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF 508 (781)
T ss_dssp SSCEEEE---CCST--TTCCCCEEEEEECTTSEE-EEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE
T ss_pred CCCcEEE---eccC--CCCCCeEEEEEECCCCCE-EEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE
Confidence 6533211 1100 123456888888888764 4455566666666654443322211 467899999998875
Q ss_pred EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191 192 LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271 (312)
Q Consensus 192 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 271 (312)
. .|+.++-+..+|..+.+ ...+.... ......|.++...++|.+.++.. +|.|..||..+..
T Consensus 509 W-igt~~~Gl~~~~~~~~~-~~~~~~~~---~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~------------ 570 (781)
T 3v9f_A 509 W-IGTFGGGVGIYTPDMQL-VRKFNQYE---GFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD------------ 570 (781)
T ss_dssp E-EEESSSCEEEECTTCCE-EEEECTTT---TCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC------------
T ss_pred E-EEEcCCCEEEEeCCCCe-EEEccCCC---CCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc------------
Confidence 5 45554457778876543 33333211 11345688999999998777655 6654888776542
Q ss_pred eeEEeec----cCcceeEEEeccCCCeEEEE
Q psy15191 272 EVQKLYG----HGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 272 ~~~~~~~----~~~~v~~~~~s~~~~~l~s~ 298 (312)
...+.. ....|.++...++|++.+++
T Consensus 571 -~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 571 -YQVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp -CEEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred -EEEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 111111 12346677777777665554
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.12 E-value=0.00044 Score=61.03 Aligned_cols=221 Identities=9% Similarity=0.040 Sum_probs=112.0
Q ss_pred CceEEEecCCC-----------cEEEeeecCCcccccc--------cc---cCCCCCceEEEEeC-CCcEEEEcCCCCcc
Q psy15191 65 HKDLVSCSLDK-----------TAILWKYVSEGNYLPY--------HM---RDDSKQLHLLSCSM-DKSIIVWAPDPTTG 121 (312)
Q Consensus 65 ~~~l~s~~~dg-----------~i~vw~~~~~~~~~~~--------~~---~~~~~~~~l~~~~~-d~~i~i~d~~~~~~ 121 (312)
+++++.|+.+. .+.+||..+++...+. ++ ....++..++.|+. +..+.+||..+.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~-- 275 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD-- 275 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC--
Confidence 78888887543 5888998877642211 11 11245667788774 457999998873
Q ss_pred eeeeeeeecccCCCccceeEEEECCCCCeEEEee-cC-----CeEEE-ecc--cCceeeee--cccCCceeEEEECCCCC
Q psy15191 122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQ-----GSLHL-DVT--TWKQIQTL--PCHQLTITQLAFSPDDT 190 (312)
Q Consensus 122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----~~i~~-d~~--~~~~~~~~--~~~~~~v~~~~~~~~~~ 190 (312)
.+.... .+..... -.+++..++++.++.|+ .+ ..+.+ |.. +|...... ......-....+..++.
T Consensus 276 ~W~~~~---~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~ 351 (656)
T 1k3i_A 276 SWIPGP---DMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNH 351 (656)
T ss_dssp EEEECC---CCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCS
T ss_pred ceeECC---CCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCc
Confidence 333221 1111111 23456668999999988 34 33555 554 34443110 00000000012234455
Q ss_pred EEEEEecC---------CeEEEEEccCCCeEEEEeccCCCC--cccceeeEEEEEc-CCCceEEEeccCC----------
Q psy15191 191 HLVSVSRD---------RRWGLYKRQSSGRLSLVACSDKTN--GVHKRIIWGVAWS-HDSRYFLTISRDG---------- 248 (312)
Q Consensus 191 ~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~-~~~~~l~s~~~dg---------- 248 (312)
.++.++.+ ..+..||..+.............. ......-.++.|. .++++++.|+.++
T Consensus 352 iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~ 431 (656)
T 1k3i_A 352 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNA 431 (656)
T ss_dssp CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCE
T ss_pred eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcc
Confidence 55555444 356788887765443222110000 0000112344443 3788888888543
Q ss_pred -eEEEEecCCCCCCcccccccccceeEEeeccCcc-eeEEEeccCCCeEEEEecC
Q psy15191 249 -VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE-IYSLAASHDGTLLASACKA 301 (312)
Q Consensus 249 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~s~d 301 (312)
.|.+||..+.. |..+..-..+... -.+++..|++++++.|+.+
T Consensus 432 ~~v~~yd~~~~~----------W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 432 HIITLGEPGTSP----------NTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp EEEECCSTTSCC----------EEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred eEEEcCCCCCCC----------eeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 56677665431 2222100111222 2344567899999999754
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.00041 Score=57.80 Aligned_cols=141 Identities=9% Similarity=0.098 Sum_probs=84.7
Q ss_pred ceeEEEECC-CCCeEEEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEecC-C----eEEEEEccCCC
Q psy15191 138 GFYGCKFGP-RGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-R----RWGLYKRQSSG 210 (312)
Q Consensus 138 ~v~~~~~~~-~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~~wd~~~~~ 210 (312)
....++++| ++..|+++...+.|+. |+....+..... .......+++++++++|+.+... + .+..++.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 467889998 4566666665455655 776655444333 44568899999999966665542 2 34444443221
Q ss_pred e-EEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEe
Q psy15191 211 R-LSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA 288 (312)
Q Consensus 211 ~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 288 (312)
. ...+. .......++++| ++.++++-..++.|+.++....... .+... +.....+.++|
T Consensus 217 ~~~~~l~--------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~----------~~~~~-~~~~~P~gia~ 277 (430)
T 3tc9_A 217 KVITELT--------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT----------PLFTI-QDSGWEFHIQF 277 (430)
T ss_dssp CSEEEEE--------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE----------EEEEC-SSSSCCEEEEE
T ss_pred eeeeeec--------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE----------EEEEc-CCCCcceeEEE
Confidence 1 11222 112245788999 7777777777889999998754110 11111 11234678999
Q ss_pred ccCCCeEEEE
Q psy15191 289 SHDGTLLASA 298 (312)
Q Consensus 289 s~~~~~l~s~ 298 (312)
+|+|++|..+
T Consensus 278 ~pdG~~lyv~ 287 (430)
T 3tc9_A 278 HPSGNYAYIV 287 (430)
T ss_dssp CTTSSEEEEE
T ss_pred cCCCCEEEEE
Confidence 9999955444
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.0006 Score=56.80 Aligned_cols=153 Identities=8% Similarity=0.022 Sum_probs=90.4
Q ss_pred cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC-C----eEEE-
Q psy15191 90 PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ-G----SLHL- 162 (312)
Q Consensus 90 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~----~i~~- 162 (312)
+..+..++ +...|+.+...+.|+.+|+.......+ . ........++++++++.|+++... + .+.+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~-----~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV---Y-----SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE---E-----CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE---e-----cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 33444454 234555555557888888876332211 1 133457889999999966666542 1 2333
Q ss_pred ecc-cCceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCce
Q psy15191 163 DVT-TWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY 240 (312)
Q Consensus 163 d~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (312)
+.. .+.....+. .......++++| ++.++++-..++.|..++............. .......++|+|++++
T Consensus 211 ~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~------~~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 211 TRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ------DSGWEFHIQFHPSGNY 283 (430)
T ss_dssp EGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS------SSSCCEEEEECTTSSE
T ss_pred eCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC------CCCcceeEEEcCCCCE
Confidence 322 122112222 223457789999 6776666667789999998755432222221 1234668999999994
Q ss_pred -EEEeccCCeEEEEecCC
Q psy15191 241 -FLTISRDGVCVVWGLGE 257 (312)
Q Consensus 241 -l~s~~~dg~i~iwd~~~ 257 (312)
+++-...+.|..++...
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 45555678899987653
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.95 E-value=0.0041 Score=49.10 Aligned_cols=183 Identities=11% Similarity=0.029 Sum_probs=97.0
Q ss_pred CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-CC-eE-EEecccCceeee
Q psy15191 96 DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-QG-SL-HLDVTTWKQIQT 172 (312)
Q Consensus 96 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~-~i-~~d~~~~~~~~~ 172 (312)
.+++.++++-..++.|..+|..... ..... ....+..+++.++++++++... ++ .+ ++|..+.++...
T Consensus 40 ~~~g~lyv~d~~~~~I~~~d~~g~~---~~~~~------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 40 APDGTIFVTNHEVGEIVSITPDGNQ---QIHAT------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCCE---EEEEE------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCCCCEEEEeCCCCeEEEECCCCce---EEEEe------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 4455556665677888888876521 11111 1235788999999996555433 23 23 336666655432
Q ss_pred ec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC-eEEEEeccCC--CCcccceeeEEEEEcCCCceEE-EeccC
Q psy15191 173 LP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG-RLSLVACSDK--TNGVHKRIIWGVAWSHDSRYFL-TISRD 247 (312)
Q Consensus 173 ~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~-s~~~d 247 (312)
.. ........++..+++..+++-..++.|+.+|..... .+........ .........+.+ +|++++|+ +-...
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 22 112233455555655545554468889999876432 1211111000 000011234455 78887554 45567
Q ss_pred CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 248 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
+.|..|++....... ....+. .......++++++|+++++..
T Consensus 189 ~~I~~~~~~~~g~~~---------~~~~~~-~~~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPG---------EPEIFV-EQTNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp TEEEEEEBCTTSCBC---------CCEEEE-ESCCCSSEEEBTTCCEEEECB
T ss_pred CEEEEEEeCCCCCCC---------ccEEEe-ccCCCCCeEECCCCCEEEEeC
Confidence 899999987521100 011111 113456788888888766653
No 272
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.92 E-value=0.005 Score=49.17 Aligned_cols=144 Identities=11% Similarity=0.157 Sum_probs=84.2
Q ss_pred ccceeEEEECCCCCeEEEeecCCeEEE--e--cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGFQGSLHL--D--VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~--d--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
...+..+.+.+++.+++++. +|.+.. | -.+|+.... .....+..+.+.+++..+ .++.+|.+++.+...++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN 237 (327)
T ss_dssp CCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred CcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence 34688899999888776654 455555 4 467877643 345678899999988755 455688877764221222
Q ss_pred EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191 212 LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD 291 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 291 (312)
...+..+. ......+.++++.+++.+++++. +|.| .+....+ +.|+.+.........+.++.|.++
T Consensus 238 W~~~~~~~---~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG---------~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 238 WGELLSPL---RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG---------QTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp ECCCBCTT---SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT---------SSCEECGGGTTSSSCCCEEEEEET
T ss_pred eEeccCCc---ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC---------cccEEcCccCCCCCCeEEEEEECC
Confidence 22111110 00223478899998887777655 5655 2333322 334333222123456788999766
Q ss_pred CCeEEEE
Q psy15191 292 GTLLASA 298 (312)
Q Consensus 292 ~~~l~s~ 298 (312)
+. ++.+
T Consensus 304 ~~-~~~~ 309 (327)
T 2xbg_A 304 DQ-GFIL 309 (327)
T ss_dssp TE-EEEE
T ss_pred Cc-eEEE
Confidence 65 5555
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.91 E-value=0.0062 Score=49.89 Aligned_cols=206 Identities=9% Similarity=-0.091 Sum_probs=116.8
Q ss_pred eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc--------ccCCC-CCceEE
Q psy15191 33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH--------MRDDS-KQLHLL 103 (312)
Q Consensus 33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--------~~~~~-~~~~l~ 103 (312)
++++......+.+ ...+..++|.+. ++.++++-...+.|..+++.......+.. +...+ .+.+++
T Consensus 102 ~~~~~~~~~~~~~-~~~~~gl~~d~~-----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 102 LPHRSEYTLLLNN-LENAIALDFHHR-----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp CTTSCCCEEEECS-CSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ccCCCcEEEEecC-CCccEEEEEecC-----CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 4554444444443 345789999875 24556666677889999887654321111 11121 233344
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC--CeEEE-ecccCceeeeecccCCce
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--GSLHL-DVTTWKQIQTLPCHQLTI 180 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~-d~~~~~~~~~~~~~~~~v 180 (312)
+-...+.|.+.+++......+. .........++++|.+..|+.+... +.|.. ++..-.........-...
T Consensus 176 ~d~~~~~I~~~~~dg~~~~~l~-------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 248 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHRKVLL-------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 248 (386)
T ss_dssp EETTTTEEEECBTTSCSCEEEE-------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred EcCCCCeEEEEeCCCCceEEee-------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe
Confidence 4445566777776542211111 1223456889999977766665433 45655 554322222222223456
Q ss_pred eEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 181 TQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 181 ~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+.|+++|++..|+.+ +..+.|..+|+........+.. ......++++ ..+.++++-...+.|..++..++.
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC-------CCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCc
Confidence 899999866655554 4567899999875444333332 1223567777 355666677778889888855553
No 274
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.013 Score=52.93 Aligned_cols=224 Identities=9% Similarity=-0.040 Sum_probs=123.4
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc----------------------cccccCCCCCceEEEE
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL----------------------PYHMRDDSKQLHLLSC 105 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~----------------------~~~~~~~~~~~~l~~~ 105 (312)
..|.++...++ |. |..|...+-|.++|..+..... +..+....++ .+-.|
T Consensus 258 ~~i~~i~~d~~------g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~lWig 329 (781)
T 3v9f_A 258 SYIFSIKQLKD------NK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-NIWIG 329 (781)
T ss_dssp CCEEEEEECTT------SE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC-CEEEE
T ss_pred ceEEEEEECCC------CC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-CEEEE
Confidence 45777776665 55 4445554557788876543211 1111112233 46667
Q ss_pred eCCCcEEEEcCCCCcceeeeeeee--cccCCCccceeEEEECCCCCeEEEee-cCCeEEEecccCceeeee---cccCCc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARV--GEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHLDVTTWKQIQTL---PCHQLT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~d~~~~~~~~~~---~~~~~~ 179 (312)
+.++-|..++.............. ....-....|.++...+++.+. .|+ ..|..+++..+.....-. ......
T Consensus 330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 408 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNS 408 (781)
T ss_dssp EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSB
T ss_pred ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcc
Confidence 767778888876543222111000 0011123568899988887754 455 455555555543322211 123467
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
|.++...+++.+ ..|+.++.+..+|..+.+ ...+... ......|.++...+++.+.+... +-|..||..+..
T Consensus 409 v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~-~~~~~~~----~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 409 VLCSLKDSEGNL-WFGTYLGNISYYNTRLKK-FQIIELE----KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKK 480 (781)
T ss_dssp EEEEEECTTSCE-EEEETTEEEEEECSSSCE-EEECCST----TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSS
T ss_pred eEEEEECCCCCE-EEEeccCCEEEEcCCCCc-EEEeccC----CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCe
Confidence 899998888764 456777778888876543 2222211 11345688999988888766544 458889876542
Q ss_pred CCcccccccccceeEEee---ccCcceeEEEeccCCCeEEEE
Q psy15191 260 TEEDLVQNTLWPEVQKLY---GHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~ 298 (312)
.. ...... .....|.++...++|.+.+..
T Consensus 481 ~~----------~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 481 VI----------HHYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp CC----------EEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred EE----------ecccCcccccccceeEEEEEcCCCCEEEEE
Confidence 11 111000 113568888888888766655
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.89 E-value=0.0037 Score=49.32 Aligned_cols=118 Identities=11% Similarity=0.108 Sum_probs=78.4
Q ss_pred ceeEEEE---CCCCCeEEEeec-------------CCeEEE-ecc---cCceeeeec--c-----------cCCceeEEE
Q psy15191 138 GFYGCKF---GPRGDYIIAHGF-------------QGSLHL-DVT---TWKQIQTLP--C-----------HQLTITQLA 184 (312)
Q Consensus 138 ~v~~~~~---~~~~~~l~~~~~-------------~~~i~~-d~~---~~~~~~~~~--~-----------~~~~v~~~~ 184 (312)
.+..+.+ .|+++++++... +..+.. |+. +++...... . .......|+
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4578888 578666665331 344444 877 676654432 1 113588999
Q ss_pred ECCCCCEEEEEecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191 185 FSPDDTHLVSVSRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 185 ~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 257 (312)
..++|+..++++.. +.|...+............. .........+.++++|+|..|+.....|.|..+|+..
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~--~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES--GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC--CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC--CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 99999999999888 88887777644322222111 1111334477899999999888887799999999884
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.87 E-value=0.0066 Score=48.99 Aligned_cols=144 Identities=11% Similarity=-0.053 Sum_probs=82.2
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCceeeeecccCC
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQL 178 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~ 178 (312)
++++-...+.|..+++.......+. .........+++.+.+..|+ +-...+.|.+ ++..............
T Consensus 87 ly~~D~~~~~I~r~~~~g~~~~~~~-------~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~ 159 (349)
T 3v64_C 87 VFWSDVTLDRILRANLNGSNVEEVV-------STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE 159 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEE-------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS
T ss_pred EEEEeccCCceEEEecCCCCceEEE-------eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC
Confidence 3444445567777777653321111 11123456789987655554 4445567776 5543322222223335
Q ss_pred ceeEEEECCCCCEEEEE-ecC-CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEE-eccCCeEEEEec
Q psy15191 179 TITQLAFSPDDTHLVSV-SRD-RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLT-ISRDGVCVVWGL 255 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~-~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~ 255 (312)
....++++|.+..|+.. ... +.|..+++........... .....+.++++|++..|+. -...+.|..+|+
T Consensus 160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT-------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC-------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 57899999965555444 344 7888888875443322221 2334678999986665554 456678999997
Q ss_pred CCC
Q psy15191 256 GEP 258 (312)
Q Consensus 256 ~~~ 258 (312)
...
T Consensus 233 dG~ 235 (349)
T 3v64_C 233 DGS 235 (349)
T ss_dssp TSC
T ss_pred CCC
Confidence 643
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.86 E-value=0.0062 Score=48.37 Aligned_cols=162 Identities=9% Similarity=-0.125 Sum_probs=91.9
Q ss_pred CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-eccc----CceeeeecccCCceeE
Q psy15191 109 KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTT----WKQIQTLPCHQLTITQ 182 (312)
Q Consensus 109 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~----~~~~~~~~~~~~~v~~ 182 (312)
..|+..|+...+...+ . .....+..++|++.+..|+.+. ..+.|.. ++.. ................
T Consensus 10 ~~I~~i~~~~~~~~~~--~------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSL--I------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEE--E------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceEeh--h------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 5588888876432211 1 1234568899998766555544 4567766 5553 1112222222245678
Q ss_pred EEECCCCC-EEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-C-CeEEEEecCCCC
Q psy15191 183 LAFSPDDT-HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-D-GVCVVWGLGEPP 259 (312)
Q Consensus 183 ~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~iwd~~~~~ 259 (312)
+++++.+. .+++-...+.|.++++........+.. .......++++|.+..|+.+.. . +.|...++....
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 99987544 445556678999999875544333332 2234678999986665544433 3 678888775431
Q ss_pred CCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191 260 TEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
...+ ...-...+.++++|++..|..+
T Consensus 155 -------------~~~~~~~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 155 -------------IYSLVTENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp -------------EEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred -------------eEEEEECCCCCceEEEEeccCCEEEEE
Confidence 1122 1223456788898876655544
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.84 E-value=0.0053 Score=46.85 Aligned_cols=125 Identities=12% Similarity=0.163 Sum_probs=83.0
Q ss_pred ccCCCccceeEEEECCCCCeEEE-eecCCeEEE-ecccCceeeeec-ccCCceeEEEECCCCCEEEEEecCCeEEEEEcc
Q psy15191 131 EVGGNTLGFYGCKFGPRGDYIIA-HGFQGSLHL-DVTTWKQIQTLP-CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207 (312)
Q Consensus 131 ~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 207 (312)
.+++-...+..++++|++..|++ ...++.|.. |.. .++...+. ........+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34455567999999998776665 555555555 877 77776664 223567889999998877776677899999987
Q ss_pred CCCeEEEEeccC--CCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 208 SSGRLSLVACSD--KTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 208 ~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
....+....... ............++|+|.++.|.++.+.....+|.+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 665422211111 0011144557899999999877777766555666554
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.83 E-value=0.0037 Score=49.38 Aligned_cols=161 Identities=6% Similarity=0.032 Sum_probs=94.9
Q ss_pred CccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeee-ecc----c--CCceeEEEE---CCCCCEEEEEec-----
Q psy15191 135 NTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQT-LPC----H--QLTITQLAF---SPDDTHLVSVSR----- 197 (312)
Q Consensus 135 ~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~~----- 197 (312)
......+++|++....++.++ ..+.|.. +......... +.. . ...+..|.| .|+++++++...
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 344456789988655555555 7888877 5553322222 221 1 124689999 688777775432
Q ss_pred --------CCeEEEEEcc---CCCeEEEEeccCCCCc------ccceeeEEEEEcCCCceEEEeccC-CeEEEEecCCCC
Q psy15191 198 --------DRRWGLYKRQ---SSGRLSLVACSDKTNG------VHKRIIWGVAWSHDSRYFLTISRD-GVCVVWGLGEPP 259 (312)
Q Consensus 198 --------d~~i~~wd~~---~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~ 259 (312)
+..+..||+. +.+............. ........++..++|+..++++.. +.|...+.....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence 6779999998 6666555442110000 011347899999999999988888 876666544321
Q ss_pred CCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 260 TEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
. ..|-............+.|+++|+|++|+.....+
T Consensus 171 ~-------~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 171 V-------STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp E-------EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred E-------eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence 0 00000000011122367999999999888885333
No 280
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.82 E-value=0.0092 Score=48.88 Aligned_cols=170 Identities=11% Similarity=-0.054 Sum_probs=94.8
Q ss_pred CCcEEEeeecCCcccc-------cccccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC
Q psy15191 74 DKTAILWKYVSEGNYL-------PYHMRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG 145 (312)
Q Consensus 74 dg~i~vw~~~~~~~~~-------~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (312)
...|+..++....... +.-+.+.+ .+.++++-...+.|..+++.......+ . .........+++.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~---~----~~~~~~p~glavd 167 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV---V----STGLESPGGLAVD 167 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE---E----CSSCSCCCCEEEE
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE---E----eCCCCCccEEEEE
Confidence 3567777776554321 11122232 233444445566777777765321111 1 1112245678888
Q ss_pred CCCCeEE-EeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe-cC-CeEEEEEccCCCeEEEEeccCCC
Q psy15191 146 PRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS-RD-RRWGLYKRQSSGRLSLVACSDKT 221 (312)
Q Consensus 146 ~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~wd~~~~~~~~~~~~~~~~ 221 (312)
+.+..|+ +-...+.|.+ ++..................++++|.+..|+... .. +.|..+++...........
T Consensus 168 ~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---- 243 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---- 243 (386)
T ss_dssp TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS----
T ss_pred eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC----
Confidence 7655554 4445667777 5543322222223335678999998666555443 34 6788888875544433322
Q ss_pred CcccceeeEEEEEcCCCceEE-EeccCCeEEEEecCC
Q psy15191 222 NGVHKRIIWGVAWSHDSRYFL-TISRDGVCVVWGLGE 257 (312)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~ 257 (312)
.....+.++++|++..|+ +-+..+.|..+|+..
T Consensus 244 ---~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 244 ---HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp ---SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred ---CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 223467899998666554 445667899998764
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.77 E-value=0.011 Score=48.56 Aligned_cols=166 Identities=8% Similarity=-0.134 Sum_probs=96.9
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-eccc----CceeeeecccCCc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTT----WKQIQTLPCHQLT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~----~~~~~~~~~~~~~ 179 (312)
+....|+..++.......+. .....+..++|++.+..|+.+. ..+.|+. ++.. .............
T Consensus 89 ~~~~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 89 TNRHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp EETTEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred eccceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 34477888888764322211 2334578999998766665554 4566655 5443 1122222223446
Q ss_pred eeEEEECC-CCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEEecC
Q psy15191 180 ITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVWGLG 256 (312)
Q Consensus 180 v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~ 256 (312)
...+++.+ .++++++-...+.|.+.++........+.. .......++++|.+.+|+.+. ..+.|...++.
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 77899988 455555556678899999886554444432 223467899999666555443 24678888876
Q ss_pred CCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
.... ...+...-...+.|++++++..|..+
T Consensus 234 G~~~------------~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 234 GVDI------------YSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SCSC------------EEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCcc------------EEEEECCCCceEEEEEEeCCCEEEEE
Confidence 4321 11112222456788888776655555
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.77 E-value=0.0094 Score=47.52 Aligned_cols=187 Identities=13% Similarity=0.240 Sum_probs=102.9
Q ss_pred CceEEEecCCCcEEEeeecCCcccccccc-cC-----CC----CCc---eEEEEe-C--CCcEEEEcCCCCcceeeeeee
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNYLPYHM-RD-----DS----KQL---HLLSCS-M--DKSIIVWAPDPTTGLWLETAR 128 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~-----~~----~~~---~l~~~~-~--d~~i~i~d~~~~~~~~~~~~~ 128 (312)
..+++.....+-+.+||+ .++.+...-. .. -+ .+. ++++.. . +++|.+|++...... +....
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc
Confidence 455666667788999999 4443211100 00 00 011 223333 3 578999976432222 11111
Q ss_pred ec--ccCCCccceeEEEE--CCC-CC-eEEEeecCCeEEE-ec-------ccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191 129 VG--EVGGNTLGFYGCKF--GPR-GD-YIIAHGFQGSLHL-DV-------TTWKQIQTLPCHQLTITQLAFSPDDTHLVS 194 (312)
Q Consensus 129 ~~--~~~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~-d~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (312)
.. .+......++.+++ +|. ++ ++++...+|.+.. ++ .+.++++.+. ..+.+..+...+....|+.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEE
Confidence 00 00011255677888 774 44 5777788888766 32 2334455555 3467888999998889999
Q ss_pred EecCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEE--cCCCc-eEEEec-cCCeEEEEecC
Q psy15191 195 VSRDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAW--SHDSR-YFLTIS-RDGVCVVWGLG 256 (312)
Q Consensus 195 ~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~s~~-~dg~i~iwd~~ 256 (312)
+-++..|..++.+... ....+...... .....+..|++ .++++ ||++++ .++...+||..
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g--~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGR--HLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSS--SBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCC--ccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999777777755221 11112111000 02234777777 45555 555555 67799999986
No 283
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.74 E-value=0.0031 Score=46.49 Aligned_cols=146 Identities=12% Similarity=-0.001 Sum_probs=78.0
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee------eeec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI------QTLP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 208 (312)
.+..++|+|+|.+.++ .+|.+.- +..+.... ..+- +-. ....+.|.|+|.+.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5679999999986666 7777666 43321110 1110 111 1478999999987776 669888776532
Q ss_pred CCeEEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeec--cCcceeE
Q psy15191 209 SGRLSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG--HGYEIYS 285 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 285 (312)
...-.-+... ..... --..+..|.+.|+|.+.+.. |+.++-....... ...|.......+ .-..-+.
T Consensus 117 ~~~~~Wl~~a-~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~-------~~~wl~~~~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 117 SDTDNWIARA-TEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN-------QDNWLARATKIGQGGWDTFKF 186 (236)
T ss_dssp STTCCHHHHS-EEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST-------TCCHHHHCEEEESSSGGGEEE
T ss_pred CCCCceeccc-cEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC-------CcccccccceeccCCcceEEE
Confidence 2111000000 00000 11357899999999988776 7775433222111 111211222222 2223445
Q ss_pred EEeccCCCeEEEE
Q psy15191 286 LAASHDGTLLASA 298 (312)
Q Consensus 286 ~~~s~~~~~l~s~ 298 (312)
+.|.++|.+.+..
T Consensus 187 l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ 199 (236)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEECCCCcEEEEe
Confidence 6788988776665
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.64 E-value=0.0013 Score=58.41 Aligned_cols=207 Identities=8% Similarity=-0.065 Sum_probs=107.8
Q ss_pred eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Ccccc--------cccccCC-CCC
Q psy15191 33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGNYL--------PYHMRDD-SKQ 99 (312)
Q Consensus 33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~~~--------~~~~~~~-~~~ 99 (312)
+.++.+....+.. ...+..++|.+. ++.++++-...+.|+.+++.. ..... +.-+... ..+
T Consensus 392 d~~~~~~~~~~~~-~~~p~gla~d~~-----~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g 465 (699)
T 1n7d_A 392 TLDRSEYTSLIPN-LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 465 (699)
T ss_dssp CTTSCCEECCSCC-CTTCCCCEEETT-----TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSS
T ss_pred eCCCCcceeeecc-CcceEEEccccc-----cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCC
Confidence 3444433333332 345668888875 134445545567899988875 12111 1111222 233
Q ss_pred ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-CeEEE-ecccCceeeeeccc
Q psy15191 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-GSLHL-DVTTWKQIQTLPCH 176 (312)
Q Consensus 100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-~~i~~-d~~~~~~~~~~~~~ 176 (312)
.++++-...+.|.++++.......+. .........++++|.+.+|+.+.. . +.|.. ++..-.........
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~-------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~ 538 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLF-------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 538 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEEC-------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS
T ss_pred cEEEEeccCCeEEEEecCCCceEEEE-------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC
Confidence 34444455677888887653221111 111234577899997665555443 2 56665 43321111111112
Q ss_pred CCceeEEEECCCCCEEE-EEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 177 QLTITQLAFSPDDTHLV-SVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 177 ~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
-...+.|+|+|++..|+ +-+..+.|..+++........+.... ......+|++..+ .++++....+.|..++.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~-----~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS-----SCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCC-----cCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 23457899998755554 44566789999987544433332111 1112334555543 45556666778999986
Q ss_pred CCC
Q psy15191 256 GEP 258 (312)
Q Consensus 256 ~~~ 258 (312)
.++
T Consensus 613 ~~G 615 (699)
T 1n7d_A 613 LTG 615 (699)
T ss_dssp TTE
T ss_pred cCC
Confidence 554
No 285
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.63 E-value=0.017 Score=46.57 Aligned_cols=206 Identities=9% Similarity=-0.090 Sum_probs=116.5
Q ss_pred eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc--------cccCCC-CCceEE
Q psy15191 33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY--------HMRDDS-KQLHLL 103 (312)
Q Consensus 33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--------~~~~~~-~~~~l~ 103 (312)
++++......+.+ ...+..++|.+. ++.++++-...+.|..+++.......+. -+...+ .+.+++
T Consensus 59 ~~~g~~~~~~~~~-~~~~~~l~~d~~-----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 59 LPHRSEYTLLLNN-LENAIALDFHHR-----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp CTTSCCEEEEECS-CSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred eCCCCeeEEeecC-CCceEEEEEecc-----ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE
Confidence 4544444444443 345789999875 2455566666788999988765432211 111122 233444
Q ss_pred EEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-CeEEE-ecccCceeeeecccCCce
Q psy15191 104 SCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-GSLHL-DVTTWKQIQTLPCHQLTI 180 (312)
Q Consensus 104 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-~~i~~-d~~~~~~~~~~~~~~~~v 180 (312)
+-...+.|.+.+++......+. .........++++|.+..|+.... . +.|.. ++..-.........-...
T Consensus 133 ~d~~~~~I~~~~~dG~~~~~l~-------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 133 TDSGTSRIEVANLDGAHRKVLL-------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEE-------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred EcCCCCeEEEEcCCCCceEEEE-------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc
Confidence 4455667777777643211111 122345688999997666665543 3 55655 544322222122223456
Q ss_pred eEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 181 TQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 181 ~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+.|+++|++..|+.+ ...+.|..+|+........+.. ......++++ ..+.++++-...+.|..++..++.
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC-------CCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 899999866666555 4567899999876444333332 1223556777 355666666677888888855543
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.019 Score=46.36 Aligned_cols=65 Identities=11% Similarity=0.043 Sum_probs=40.2
Q ss_pred eeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
....++| .+|.++++.-..+.|...++......... .....+......+.++++.|||.++++..
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~------~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRV------LRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEE------EEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceee------cchheecccCCCeeEEEECCCCcEEEEEe
Confidence 4567777 46777777777788888877643210000 00112222235789999999998887764
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.56 E-value=0.019 Score=45.57 Aligned_cols=193 Identities=8% Similarity=-0.052 Sum_probs=110.5
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc-c--------ccccCC-CCCceEEEEeCCCcEEEEcCC
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-P--------YHMRDD-SKQLHLLSCSMDKSIIVWAPD 117 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-~--------~~~~~~-~~~~~l~~~~~d~~i~i~d~~ 117 (312)
..+..+.|.+. ++.++.+-...+.|..+++....... + .-+... ..+.++++-...+.|.+++++
T Consensus 35 ~~~~~ld~d~~-----~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 35 EDAAAVDFVFS-----HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp EEEEEEEEEGG-----GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEEeC-----CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence 35678899885 24556666677889888887653211 1 111112 133344444556677788776
Q ss_pred CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191 118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVS 194 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (312)
......+. .........+++.|.+..|+.+.. .+.|.. ++..-.........-...+.|+++|++..|+.
T Consensus 110 G~~~~~l~-------~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 110 GSLRKVLF-------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp SCSCEEEE-------CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCcEEEEE-------eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence 43221111 122345688999987666666552 456665 54422211112222345689999997666655
Q ss_pred E-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191 195 V-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 195 ~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
+ +..+.|..+|+........... ......++++. .+.++.+-...+.|..++..++..
T Consensus 183 aD~~~~~I~~~d~dG~~~~~~~~~-------~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 183 ADAKLNFIHKSNLDGTNRQAVVKG-------SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EETTTTEEEEEETTSCSCEEEECS-------CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EECCCCEEEEEcCCCCceEEEecC-------CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence 5 4568899999875444333321 12234567775 345556666778899998866643
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.55 E-value=0.02 Score=45.60 Aligned_cols=180 Identities=11% Similarity=0.152 Sum_probs=100.9
Q ss_pred cCCCCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECC----CCCe--EEEee-c---CCeEEE-
Q psy15191 94 RDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGP----RGDY--IIAHG-F---QGSLHL- 162 (312)
Q Consensus 94 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~~-~---~~~i~~- 162 (312)
+..+...+++.....+-+.+||+.. ..+.... . ..++.+..-| .++. ++.++ . ++.+.+
T Consensus 35 ~~dp~~s~ii~t~k~~gL~Vydl~G---~~l~~~~-----~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf 104 (355)
T 3amr_A 35 PKTPQNSKLITTNKKSGLVVYSLDG---KMLHSYN-----T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY 104 (355)
T ss_dssp SSCGGGCEEEEEETTTEEEEEETTS---CEEEEEC-----C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred CCCCCccEEEEEcCCCCEEEEcCCC---cEEEEcc-----C--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence 3345555777777888999999943 3333322 1 2344444433 2222 33333 3 456777
Q ss_pred ec--ccCceeeeecc------cC-CceeEEEE--CCC-CC-EEEEEecCCeEEEEEccC-------CCeEEEEeccCCCC
Q psy15191 163 DV--TTWKQIQTLPC------HQ-LTITQLAF--SPD-DT-HLVSVSRDRRWGLYKRQS-------SGRLSLVACSDKTN 222 (312)
Q Consensus 163 d~--~~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~~wd~~~-------~~~~~~~~~~~~~~ 222 (312)
++ .+.. ...... .. ..+..+++ +|. +. ++++...+|.+..|++.. .+.+..+.
T Consensus 105 ~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~------ 177 (355)
T 3amr_A 105 AIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK------ 177 (355)
T ss_dssp EECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE------
T ss_pred EECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec------
Confidence 33 3332 222211 11 56677888 774 43 677888899999999843 22333443
Q ss_pred cccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-cc-CcceeEEEe--ccCCC-eEEE
Q psy15191 223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY-GH-GYEIYSLAA--SHDGT-LLAS 297 (312)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--s~~~~-~l~s 297 (312)
....+..++..+....|+.+-++.-|..++.+...... .+.+..+. ++ ...+..|++ .++++ +|++
T Consensus 178 --lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~-------~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 178 --MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSN-------GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp --CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSC-------CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred --CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCC-------ceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 33457788899988899999988766666644322110 01233331 22 235777777 56665 6666
Q ss_pred Ee
Q psy15191 298 AC 299 (312)
Q Consensus 298 ~s 299 (312)
++
T Consensus 249 Ss 250 (355)
T 3amr_A 249 SS 250 (355)
T ss_dssp EE
T ss_pred Ec
Confidence 65
No 289
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.54 E-value=0.0069 Score=49.44 Aligned_cols=116 Identities=12% Similarity=0.149 Sum_probs=74.2
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEEecc--cCcee----------eeec-c-----cCCceeEEEECC---CCCEEEEEe
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHLDVT--TWKQI----------QTLP-C-----HQLTITQLAFSP---DDTHLVSVS 196 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~--~~~~~----------~~~~-~-----~~~~v~~~~~~~---~~~~l~~~~ 196 (312)
.+..+..+|+|++|+..+..+...+.+. .+... ..+. + ...+|..+.|+| .+..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 4677999999999998876654433333 11111 0111 1 256799999999 456899999
Q ss_pred cCCeEEEEEccCCCe-EEEEeccCCC--CcccceeeEEEEEcCCCceEEE--eccCCeEEEE
Q psy15191 197 RDRRWGLYKRQSSGR-LSLVACSDKT--NGVHKRIIWGVAWSHDSRYFLT--ISRDGVCVVW 253 (312)
Q Consensus 197 ~d~~i~~wd~~~~~~-~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iw 253 (312)
.|+.|++||+..... ...+...... .......|.+++|.+++-.|.. .+..|.|+-.
T Consensus 147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999999986221 1122211100 0012366889999998876666 4488888755
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.54 E-value=0.025 Score=46.23 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=85.9
Q ss_pred CCCCeEEEeecCCeEEE-ecccCceeeeecc----cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCC----------
Q psy15191 146 PRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC----HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG---------- 210 (312)
Q Consensus 146 ~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---------- 210 (312)
.++..++.+ .++.||+ ++.....-+.+.. .-..+..+..+|+|++|+..+ +..|.|-.+....
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 445444443 3467777 4442211222221 123678899999999998875 5678888887321
Q ss_pred --eEEEEeccCCCCcccceeeEEEEEcCCC---ceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191 211 --RLSLVACSDKTNGVHKRIIWGVAWSHDS---RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285 (312)
Q Consensus 211 --~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (312)
....+..... ......+|..+.|+|-+ ..|++-..|+.|++||+.......... .+.. ....+......|.+
T Consensus 108 ~~q~~ty~l~~~-~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L-~k~~-~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 108 AFQIFHYSIDEE-EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVL-NKPN-NSFGLDARVNDITD 184 (452)
T ss_dssp TTEEEEEEGGGC-C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEE-SCCC-SEEESCSSCCCEEE
T ss_pred ccceeEEEcCCc-ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcch-hccc-cccCCCcccceEEE
Confidence 1112222111 11135679999999954 579999999999999998743211100 0000 11122233467889
Q ss_pred EEeccCCCeEEEE
Q psy15191 286 LAASHDGTLLASA 298 (312)
Q Consensus 286 ~~~s~~~~~l~s~ 298 (312)
++|.+++-.|-..
T Consensus 185 ~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 185 LEFSKDGLTLYCL 197 (452)
T ss_dssp EEECTTSSCEEEE
T ss_pred EEEcCCCcEEEEE
Confidence 9999988666554
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.53 E-value=0.015 Score=49.03 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=85.9
Q ss_pred ceeEEEECC-CCCeEEEeec-CCeEEE-ecccCceeeeecc---cCCceeEEEE-------CCCCCEEEEEecCC-----
Q psy15191 138 GFYGCKFGP-RGDYIIAHGF-QGSLHL-DVTTWKQIQTLPC---HQLTITQLAF-------SPDDTHLVSVSRDR----- 199 (312)
Q Consensus 138 ~v~~~~~~~-~~~~l~~~~~-~~~i~~-d~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~----- 199 (312)
....|+|+| +...|+++.. .+.|++ |.++..+...... .......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 3555555544 355665 8887666654432 2235889999 99999666665543
Q ss_pred --eEEEEEccCCCeE------EEEeccCCCCcccceeeEEEEEcCC-CceEEEeccCCeEEEEecC-------CCCCCcc
Q psy15191 200 --RWGLYKRQSSGRL------SLVACSDKTNGVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLG-------EPPTEED 263 (312)
Q Consensus 200 --~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~~~~ 263 (312)
.|.+++....... ..+. .......++++|+ +.++++-..++.|+.+|+. ++.....
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~--------~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA--------AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE--------EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CceEEEEecCCCCceeecccceeec--------cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 2666664331111 1221 1112456889995 5555666788899999987 4321000
Q ss_pred ccccc--ccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 264 LVQNT--LWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 264 ~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
..... ..+.+..+ +.....+.++|+|+|++|..+
T Consensus 292 ~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 292 IVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp BGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEE
T ss_pred cccccccccceeEec-CCCCCceEEEEcCCCCEEEEE
Confidence 00000 00012222 223456789999999954444
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.48 E-value=0.031 Score=45.95 Aligned_cols=209 Identities=7% Similarity=-0.082 Sum_probs=115.7
Q ss_pred eCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----cccc--------ccccCCC-CC
Q psy15191 33 NGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----NYLP--------YHMRDDS-KQ 99 (312)
Q Consensus 33 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~~~~--------~~~~~~~-~~ 99 (312)
+.++......+. ....+..++|.+. ++.++++-...+.|+.+++.... ...+ .-+.... .+
T Consensus 98 ~l~~~~~~~~~~-~~~~~~~l~~d~~-----~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~ 171 (400)
T 3p5b_L 98 TLDRSEYTSLIP-NLRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 171 (400)
T ss_dssp CTTSCSCEEEEC-SCSCEEEEEEETT-----TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT
T ss_pred ccCCcceeEecc-ccCcceEEeeeec-----cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC
Confidence 344443333333 3467889999985 24555665667888888886522 1111 1111122 23
Q ss_pred ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeeccc
Q psy15191 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCH 176 (312)
Q Consensus 100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~ 176 (312)
.++++-...+.|.+.+++......+.. .....+..++++|.+..|+.... .+.|.. ++..-.........
T Consensus 172 ~lY~~d~~~~~I~~~~~~g~~~~~l~~-------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~ 244 (400)
T 3p5b_L 172 NIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 244 (400)
T ss_dssp EEEEEETTTTEEEEECTTTCSEEEEEE-------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS
T ss_pred ceEEEECCCCeEEEEeCCCCceEEEEe-------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC
Confidence 344444556677777776532211111 12334688999997766665542 355665 55432222222223
Q ss_pred CCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEec
Q psy15191 177 QLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255 (312)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 255 (312)
-...+.|++++++..|+.+. ..+.|..+|+............. ......++++. .+.++.+-...+.|..+|.
T Consensus 245 l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~-----~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 245 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS-----TTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC-----CCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 35678999998777666654 56789999988655444443211 11224466663 4455666667778988886
Q ss_pred CCCCC
Q psy15191 256 GEPPT 260 (312)
Q Consensus 256 ~~~~~ 260 (312)
.++..
T Consensus 319 ~~G~~ 323 (400)
T 3p5b_L 319 LTGSD 323 (400)
T ss_dssp SSCCC
T ss_pred CCCCc
Confidence 66543
No 293
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.48 E-value=0.024 Score=44.48 Aligned_cols=212 Identities=10% Similarity=0.047 Sum_probs=102.8
Q ss_pred CceEEEec-CC-----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcc-eee
Q psy15191 65 HKDLVSCS-LD-----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTG-LWL 124 (312)
Q Consensus 65 ~~~l~s~~-~d-----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~ 124 (312)
+.+++.|+ .+ ..+.+||..+.+...+...+. ..++..++.|+.+ ..+.+||+.+.+. .+.
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCE
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeE
Confidence 45666666 33 357778876655322111111 1134456666654 4588888887541 022
Q ss_pred eeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191 125 ETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196 (312)
Q Consensus 125 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (312)
... .++........+.+ +++.++.|+.++ .+.+ |+ .+|...............+.+ +++.++.|+
T Consensus 95 ~~~---~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 95 SVA---PMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp EEC---CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred ECC---CCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 221 11122222222222 567777776543 3444 54 446555444322222222222 677777777
Q ss_pred cC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCccccc
Q psy15191 197 RD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQ 266 (312)
Q Consensus 197 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~ 266 (312)
.+ ..+.+||+.+.+-. .+..... .......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~-------- 232 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWT-NVTPMAT----KRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD-------- 232 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEE-EECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--------
T ss_pred CCCCcccceEEEEeCCCCcEE-eCCCCCc----ccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC--------
Confidence 55 45889998765432 2221111 1111122222 67777888764 36888988654
Q ss_pred ccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 267 NTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 267 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
.|..+..+.........+ ..++++++.|+.++
T Consensus 233 --~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 233 --SWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDG 264 (301)
T ss_dssp --EEEEECCCSSCCBSCEEE--EETTEEEEECCBCS
T ss_pred --cEEECCCCCCcccceeEE--EECCEEEEEcCcCC
Confidence 233333222211111222 23677888887654
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.43 E-value=0.013 Score=47.35 Aligned_cols=105 Identities=13% Similarity=0.161 Sum_probs=58.8
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeec---ccCCceeEEEECCC---CCEEEEEec-C-----CeEEEE
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP---CHQLTITQLAFSPD---DTHLVSVSR-D-----RRWGLY 204 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~~w 204 (312)
....++|.|+|+++ ++...|.|.+ +..+.+....+. ........|+++|+ +..|+.+.. . +.|..+
T Consensus 32 ~P~~ia~~pdG~l~-V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 32 VPWALAFLPDGGML-IAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp CEEEEEECTTSCEE-EEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred CceEEEEcCCCeEE-EEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 46789999999854 4556688877 511111111111 12356789999998 445554433 2 678888
Q ss_pred EccCCCe---EEEEeccCC-CCcccceeeEEEEEcCCCceEEEec
Q psy15191 205 KRQSSGR---LSLVACSDK-TNGVHKRIIWGVAWSHDSRYFLTIS 245 (312)
Q Consensus 205 d~~~~~~---~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~ 245 (312)
+...... ...+..... ....|. ...++|.|+|.+.++.+
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEECC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEEC
Confidence 8764321 111221110 011122 35799999998777654
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.42 E-value=0.064 Score=48.22 Aligned_cols=165 Identities=8% Similarity=-0.131 Sum_probs=92.8
Q ss_pred eCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEe-ecCCeEEE-ecccC----ceeeeecccCCc
Q psy15191 106 SMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH-GFQGSLHL-DVTTW----KQIQTLPCHQLT 179 (312)
Q Consensus 106 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~-d~~~~----~~~~~~~~~~~~ 179 (312)
+....|+..++.......+. .....+..++|++....|+.. ...+.|+. ++... .....+......
T Consensus 401 an~~~Ir~i~l~~~~~~~l~--------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEE--------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred ccccceeEeeccCCcceeee--------cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 34456777777653321111 123456789999865555544 44566655 44431 112222223345
Q ss_pred eeEEEECCCCCE-EEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec-c-CCeEEEEecC
Q psy15191 180 ITQLAFSPDDTH-LVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS-R-DGVCVVWGLG 256 (312)
Q Consensus 180 v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~-dg~i~iwd~~ 256 (312)
...|++.+.++. +++-...+.|.+.++........+.. ......+|+++|.+.+|+.+. . .+.|.+.++.
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~-------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC-------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 678999886654 44555678999999986555444432 223477899999765555443 2 3678888876
Q ss_pred CCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191 257 EPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
... ...+ ...-...+.|++++.+..|..+
T Consensus 546 G~~-------------~~~lv~~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 546 GVD-------------IYSLVTENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp SCC-------------EEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCc-------------eEEEEeCCCCCceEEEEecCCCeEEEE
Confidence 432 1222 2222456778887665555444
No 296
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.42 E-value=0.032 Score=44.69 Aligned_cols=243 Identities=12% Similarity=-0.009 Sum_probs=117.0
Q ss_pred EEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccc--------------ccccCCCC---CceEE
Q psy15191 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP--------------YHMRDDSK---QLHLL 103 (312)
Q Consensus 41 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~--------------~~~~~~~~---~~~l~ 103 (312)
..+...-...+.|+|.|+ |.++++--..|.|++++...+....+ .-+..+|+ +..|.
T Consensus 25 ~~va~gL~~P~~ia~~pd------G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG------GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp EEEECCCSSEEEEEECTT------SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred EEeecCCCCceEEEEcCC------CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEE
Confidence 344444567889999998 88777766588998887654432111 11122331 12232
Q ss_pred EE---eCCCcEEEEcCCCCc-----ceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--------------CCeEE
Q psy15191 104 SC---SMDKSIIVWAPDPTT-----GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--------------QGSLH 161 (312)
Q Consensus 104 ~~---~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~~i~ 161 (312)
.. ..++.|.-|.+.... ......+..............|+|.|+|.++++.+. .+.++
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence 22 133445555444311 000000000000112223467999999987777542 23455
Q ss_pred EecccC--------ceeeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEE--EEecc----C--CCC--
Q psy15191 162 LDVTTW--------KQIQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLS--LVACS----D--KTN-- 222 (312)
Q Consensus 162 ~d~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~--~~~~~----~--~~~-- 222 (312)
++...- +...-..+|. ....++|+|+|.++++= +.|+.=.|--+..+...- ..... . ...
T Consensus 179 i~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred EeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence 533211 0111111443 35678999988755543 223322222222211100 00000 0 000
Q ss_pred cccc-eeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEe
Q psy15191 223 GVHK-RIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299 (312)
Q Consensus 223 ~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s 299 (312)
..+. .....++|. ++.+++..-..+.|....+....... +....+.+....+.+|+..|||.++++..
T Consensus 258 ~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~--------~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 258 WSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAA--------DPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp ECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESS--------CCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceec--------ceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 0011 245677776 46666666666667666665432100 01222334456899999999998877754
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.38 E-value=0.037 Score=44.49 Aligned_cols=172 Identities=8% Similarity=0.030 Sum_probs=93.1
Q ss_pred CCCcEEEEcCCCCcceeeeeeeecc--cCCCccceeEEEECC--CCC-eEEEeec---CCeEEE---ecccC--ceeeee
Q psy15191 107 MDKSIIVWAPDPTTGLWLETARVGE--VGGNTLGFYGCKFGP--RGD-YIIAHGF---QGSLHL---DVTTW--KQIQTL 173 (312)
Q Consensus 107 ~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~--~~~-~l~~~~~---~~~i~~---d~~~~--~~~~~~ 173 (312)
.+|.|.++|+++...... ...... +.........+.+.+ ++. +|+++.. +..+.+ +.... .....+
T Consensus 81 ~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 567788888874322211 122111 122334566777755 344 3444432 334444 33222 222223
Q ss_pred cc-cCCceeEEEECCCCCEEEEEec-----------------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEc
Q psy15191 174 PC-HQLTITQLAFSPDDTHLVSVSR-----------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS 235 (312)
Q Consensus 174 ~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (312)
.+ .-...+.+.+.++|.+.++... .|.|+.+|. .+...... .-...+.++|+
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~--------~l~~pNGia~s 229 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE--------GFDFANGINIS 229 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE--------EESSEEEEEEC
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec--------CCcccCcceEC
Confidence 22 2345789999999987776541 244555544 22222222 22346789999
Q ss_pred CCCceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc-CCCeEEEEe
Q psy15191 236 HDSRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASAC 299 (312)
Q Consensus 236 ~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~s 299 (312)
||++.|+.+ +..+.|+.|++....... ....+ ...+..-.++..+ +|++.+++.
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~~g~l~---------~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHANWTLT---------PLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEE---------EEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEECCCCcEe---------cCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 999877655 467899999987432110 11122 2245567888998 599888764
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.37 E-value=0.046 Score=45.47 Aligned_cols=216 Identities=11% Similarity=-0.017 Sum_probs=116.5
Q ss_pred CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCC---Cc-EEEeeecCCcc--------ccccc
Q psy15191 25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD---KT-AILWKYVSEGN--------YLPYH 92 (312)
Q Consensus 25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d---g~-i~vw~~~~~~~--------~~~~~ 92 (312)
..|.. +++.+++.... .........+++.++ ++++++.... .. +...+...... .....
T Consensus 162 ~~I~~--id~~~g~v~~~-~~~~~~P~giavd~d------G~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~g 232 (433)
T 4hw6_A 162 DAFRH--VDFVNQYVDIK-TTNIGQCADVNFTLN------GDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKT 232 (433)
T ss_dssp SCEEE--EETTTTEEEEE-CCCCSCEEEEEECTT------CCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCC
T ss_pred CCEEE--EECCCCEEEEe-ecCCCCccEEEECCC------CCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCE
Confidence 44533 56666655444 334566889999988 7755554321 11 22233222111 01112
Q ss_pred ccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecc--cC
Q psy15191 93 MRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVT--TW 167 (312)
Q Consensus 93 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~--~~ 167 (312)
...++ ++.++++-..++.|+.++..++.... ..... +.......++++|+++.|+.+. ..+.|.. +.. +.
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~----~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMM----DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEEC----SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred EEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEecc----CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 22344 45455555567789999887543211 11111 1112234699999999666554 4556665 432 22
Q ss_pred cee--eeecc---------------cCCceeEEEE---------CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCC-
Q psy15191 168 KQI--QTLPC---------------HQLTITQLAF---------SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK- 220 (312)
Q Consensus 168 ~~~--~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~- 220 (312)
.+. ..+.+ .-.....+++ .++++++++-..++.|+.++.. + .+..+.+...
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-~v~t~~G~g~~ 385 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-RVTTYAGRGNS 385 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-EEEEEECCCTT
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-CEEEEEeCCCC
Confidence 211 11111 1123567899 7788777776777889999853 3 4444433211
Q ss_pred --C--------CcccceeeEEEEEc-CCCceEEEeccCCeEEEEecC
Q psy15191 221 --T--------NGVHKRIIWGVAWS-HDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 221 --~--------~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~ 256 (312)
. ....-.....++++ +++.++++=...+.|+.++++
T Consensus 386 ~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 386 REWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 0 00012346789999 677777777777888888764
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.36 E-value=0.051 Score=45.76 Aligned_cols=196 Identities=7% Similarity=-0.032 Sum_probs=100.2
Q ss_pred cEEEEEEec-CcCcCCCCceEEEecCCCcEEEeeecCCcccc-----------cccccC-------CCCCceEEEEeCCC
Q psy15191 49 KVMAVKWVL-NTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL-----------PYHMRD-------DSKQLHLLSCSMDK 109 (312)
Q Consensus 49 ~v~~~~~~~-~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~-----------~~~~~~-------~~~~~~l~~~~~d~ 109 (312)
....|+|.| + +++++++....+.|++.|+..+.... +..+.+ ++++..|+++...+
T Consensus 140 ~p~~la~dp~~-----~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLN-----KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTE-----EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCCEEEEccCC-----CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 356788887 3 13444444444678888877655421 222223 55565455554433
Q ss_pred -------cEEEEcCCCCcceeee-e--eeecccCCCccceeEEEECCCCCe-EEEeecCCeEEE-ecc-------cCce-
Q psy15191 110 -------SIIVWAPDPTTGLWLE-T--ARVGEVGGNTLGFYGCKFGPRGDY-IIAHGFQGSLHL-DVT-------TWKQ- 169 (312)
Q Consensus 110 -------~i~i~d~~~~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~-d~~-------~~~~- 169 (312)
.|.+++... .+.... . ..... -.....++++|++.. +++-..++.|.. |+. +...
T Consensus 215 ~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 215 GKGDESPSVYIIKRNA-DGTFDDRSDIQLIAA----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp TTGGGEEEEEEEECCT-TSCCSTTSCEEEEEE----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred CCcccCceEEEEecCC-CCceeecccceeecc----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence 255554322 011110 0 01111 123467889995554 445556676666 766 3332
Q ss_pred ----------eee-ec-ccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCC-eE---EEEecc-CCCC-------cc
Q psy15191 170 ----------IQT-LP-CHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSG-RL---SLVACS-DKTN-------GV 224 (312)
Q Consensus 170 ----------~~~-~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~-~~---~~~~~~-~~~~-------~~ 224 (312)
... +. +.......|+|+|+|++|+.+ +....|+.++..... .+ ..+.+. ...- ..
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a 369 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEA 369 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGC
T ss_pred cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccc
Confidence 111 11 223446789999999964444 567889987765432 11 222221 0000 00
Q ss_pred cceeeE-EEEEc-------CCCceEEEeccCCeEEEEe
Q psy15191 225 HKRIIW-GVAWS-------HDSRYFLTISRDGVCVVWG 254 (312)
Q Consensus 225 ~~~~v~-~~~~~-------~~~~~l~s~~~dg~i~iwd 254 (312)
.-.... .++.. +++.++++=...+.|+.++
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~ 407 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT 407 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC
T ss_pred ccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe
Confidence 111233 45554 5677777777888999998
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.35 E-value=0.023 Score=45.89 Aligned_cols=156 Identities=13% Similarity=0.099 Sum_probs=79.2
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee---eee----cccCCceeEEEECCC---CCEEEEE-ec-------C
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI---QTL----PCHQLTITQLAFSPD---DTHLVSV-SR-------D 198 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~-------d 198 (312)
....|+|.|+|+.|+++...|.|++ +.. .... ..+ .........|+++|+ +..|+.+ +. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4678999999994555667788887 532 2211 111 112345789999995 4444443 22 2
Q ss_pred CeEEEEEccCCC----eEE-EEeccCC-CCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCC
Q psy15191 199 RRWGLYKRQSSG----RLS-LVACSDK-TNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPP 259 (312)
Q Consensus 199 ~~i~~wd~~~~~----~~~-~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~ 259 (312)
..|..|+..... ... .+..... ....|. ...++|.|||.++++.+. .|.|.-++.....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 356666665321 111 1221111 011122 356999999977766543 2456666654321
Q ss_pred CCccccccc-c-cceeEEeeccCcceeEEEecc-CCCeEEEE
Q psy15191 260 TEEDLVQNT-L-WPEVQKLYGHGYEIYSLAASH-DGTLLASA 298 (312)
Q Consensus 260 ~~~~~~~~~-~-~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~ 298 (312)
......... . ...+. -.++. ....++|+| +|+++++-
T Consensus 176 p~~npf~~~~~~~~~i~-a~G~r-np~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIW-SYGIR-NPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTCTTTTSTTSCTTEE-EECCS-EEEEEEEETTTTEEEEEE
T ss_pred CCCCCCcCCCCCCccEE-EEcCc-CccceEEECCCCCEEEEe
Confidence 110000000 0 00111 12333 467899999 67766653
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.33 E-value=0.04 Score=43.88 Aligned_cols=142 Identities=12% Similarity=0.095 Sum_probs=81.7
Q ss_pred cceeEEEECCCCCeEEEeecCCeEEE--e-cccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEE-EEccCCCeE
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGSLHL--D-VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGL-YKRQSSGRL 212 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~i~~--d-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~-wd~~~~~~~ 212 (312)
..+..+.+.+++..++++ .++.+.. | -++|+.... .....+..+.+.|++.+++.+. +|.+.. .|- .+...
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~--~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQ--EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAW 196 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEEC--SCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSC
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeec--CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCce
Confidence 346777777766655554 4565555 4 457776543 3456788999999988776654 454433 332 12223
Q ss_pred EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccC
Q psy15191 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHD 291 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~ 291 (312)
..+... ....+..+++.+++++++. +.+|.+++.+... ...|..+..- ..+...+.++++.++
T Consensus 197 ~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~---------G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 197 EPHNRT------TSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN---------SENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp EEEECC------SSSCEEEEEECTTSCEEEE-ETTTEEEEEETTE---------EEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred eECCCC------CCCccceeEECCCCCEEEE-eCCceEEEecCCC---------CCeeEeccCCcccCCcceEEEEecCC
Confidence 322221 3345778899998876654 4578777663211 1223222111 012235788899888
Q ss_pred CCeEEEEe
Q psy15191 292 GTLLASAC 299 (312)
Q Consensus 292 ~~~l~s~s 299 (312)
+.+++.+.
T Consensus 261 ~~~~~~g~ 268 (327)
T 2xbg_A 261 NEVWLAGG 268 (327)
T ss_dssp SCEEEEES
T ss_pred CEEEEEeC
Confidence 87777663
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.32 E-value=0.039 Score=43.38 Aligned_cols=210 Identities=8% Similarity=0.009 Sum_probs=101.7
Q ss_pred ceEEEecCC--CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC----CcEEEEcCCCCcceeeeeeeecc
Q psy15191 66 KDLVSCSLD--KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD----KSIIVWAPDPTTGLWLETARVGE 131 (312)
Q Consensus 66 ~~l~s~~~d--g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~ 131 (312)
.+++.|+.+ ..+.+||..+.+-..+...+. ..++..++.|+.+ ..+.+||+.+.+ +.....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~--- 87 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDS--WYSKLG--- 87 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTE--EEEEEC---
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCe--EEECCC---
Confidence 455666543 467788877665422211111 1133456666644 567788888743 322211
Q ss_pred cCCCccceeEEEECCCCCeEEEeecC------CeEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEec-----
Q psy15191 132 VGGNTLGFYGCKFGPRGDYIIAHGFQ------GSLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR----- 197 (312)
Q Consensus 132 ~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 197 (312)
++........+.+ +++.++.|+.+ ..+.. |.. +|.....+.........+.+ +++.++.|+.
T Consensus 88 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNV 163 (306)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred CCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCC
Confidence 1112222222222 66777777765 22444 544 45554443322222222222 5666666654
Q ss_pred ----CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCccccccc
Q psy15191 198 ----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLVQNT 268 (312)
Q Consensus 198 ----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~ 268 (312)
-..+.+||..+.+- ..+..... .......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 164 ~~~~~~~~~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~---------- 226 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETW-TELCPMIE----ARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN---------- 226 (306)
T ss_dssp TCEECCCEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT----------
T ss_pred cccccceEEEeCCCCCeE-EECCCccc----hhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC----------
Confidence 34588999886532 22221111 1111112222 67777777654 35788887654
Q ss_pred ccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
.|..+..+.........+.+ ++++++.|+.++.
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 259 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGV 259 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSS
T ss_pred cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCC
Confidence 24333333222222222222 6788888876543
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.26 E-value=0.0082 Score=44.32 Aligned_cols=109 Identities=10% Similarity=-0.040 Sum_probs=60.8
Q ss_pred CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcc-cceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV-HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
..+..++|+|+|.+.+. .+|.++-.+..+.....-+.. ...... --..-.++.|.|+|.+.++ .||.|+-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46789999999986655 777766655433111100000 000000 0001357899999988887 66988777643
Q ss_pred CCCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEEE
Q psy15191 257 EPPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 298 (312)
+.. ...|--.....+ --..+..|.|.|+|.+.+..
T Consensus 116 ~~~-------~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 116 QSD-------TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CST-------TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred cCC-------CCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 322 122211111111 11457889999999887776
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.25 E-value=0.054 Score=43.59 Aligned_cols=111 Identities=5% Similarity=0.031 Sum_probs=67.1
Q ss_pred ccceeEEEECCCCCeEEEee-----------------cCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe-
Q psy15191 136 TLGFYGCKFGPRGDYIIAHG-----------------FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS- 196 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~-----------------~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 196 (312)
-...+.+++.++|.++++.. ..|.+.. |.. +.. .....-...+.++|+||++.|+.+.
T Consensus 164 ~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~-~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR-VVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE-EEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE-EeecCCcccCcceECCCCCEEEEEeC
Confidence 34678899999998777643 1233433 442 111 1112234568999999998777664
Q ss_pred cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcC-CCceEEEeccCC-eEEEEe
Q psy15191 197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH-DSRYFLTISRDG-VCVVWG 254 (312)
Q Consensus 197 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg-~i~iwd 254 (312)
..+.|..|++.....+...... . .....-.+++.+ +|++.+++..++ .|..|+
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~-~----~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVL-S----FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEE-E----CSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred CCCeEEEEEECCCCcEecCEEE-e----CCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 5689999998754333221111 0 234567889999 599888665443 344343
No 305
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.19 E-value=0.057 Score=42.85 Aligned_cols=144 Identities=9% Similarity=-0.015 Sum_probs=82.4
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEE-EeecCCeEEE-ecccCceeeeecccCC
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYII-AHGFQGSLHL-DVTTWKQIQTLPCHQL 178 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~-d~~~~~~~~~~~~~~~ 178 (312)
++.+-...+.|..+++....... .... ..-..+..+++.+.+..|+ +-...+.|.+ ++..............
T Consensus 49 lyw~D~~~~~I~r~~~~g~~~~~--~~~~----~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~ 122 (318)
T 3sov_A 49 IYWSDVSEEAIKRTEFNKTESVQ--NVVV----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 122 (318)
T ss_dssp EEEEETTTTEEEEEETTSSSCCC--EEEE----ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEECCCCcEEEEEccCCCceE--EEEc----CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence 44444556677777776532110 0000 1112456788887555444 4445567776 5543222222223345
Q ss_pred ceeEEEECCCCCEEEEEe--cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe-ccCCeEEEEec
Q psy15191 179 TITQLAFSPDDTHLVSVS--RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI-SRDGVCVVWGL 255 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~ 255 (312)
....++++|.+..|+.+. ..+.|...++........... .-...+.++++|++..|+.+ +..+.|..+|+
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS-------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC-------CCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 678999998655555554 357888888875443333221 22346789999966655544 56778999998
Q ss_pred CC
Q psy15191 256 GE 257 (312)
Q Consensus 256 ~~ 257 (312)
..
T Consensus 196 dG 197 (318)
T 3sov_A 196 DG 197 (318)
T ss_dssp TS
T ss_pred CC
Confidence 64
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.18 E-value=0.1 Score=45.63 Aligned_cols=166 Identities=8% Similarity=-0.106 Sum_probs=96.8
Q ss_pred CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCceeEEE
Q psy15191 107 MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLTITQLA 184 (312)
Q Consensus 107 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~ 184 (312)
....|+..++...... ...+. ..-..+..++|++.+..++.+. .++.|.. ++..................|+
T Consensus 13 ~~~~I~~i~l~~~~~~--~~~~~----~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 13 RRADIRRISLETNNNN--VAIPL----TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp ETTEEEEEESSCTTCE--EECCC----CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred eCCcEEEEECCCCCcc--eEEEc----CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 5677888888764321 11111 1224578899999766666544 5666766 5544333333332224567899
Q ss_pred ECCCCCEE-EEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEec--cCCeEEEEecCCCCCC
Q psy15191 185 FSPDDTHL-VSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS--RDGVCVVWGLGEPPTE 261 (312)
Q Consensus 185 ~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~ 261 (312)
+++.+..| ++-...+.|.+.++........+.. .-....+++++|...+|+.+. ..+.|...++....
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~-------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-- 157 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK-------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-- 157 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECS-------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC-------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--
Confidence 98755544 5555678899999876554333322 223467899998655554443 35677777765442
Q ss_pred cccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 262 EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
...+...-...+.|++++++..|..+
T Consensus 158 -----------~~~l~~~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 158 -----------RTTLVPNVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp -----------CEEEECSCSSEEEEEEETTTTEEEEE
T ss_pred -----------eEEEECCCCCcceEEEccccCEEEEE
Confidence 12222233456788888876655554
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.16 E-value=0.057 Score=42.30 Aligned_cols=210 Identities=10% Similarity=0.130 Sum_probs=98.3
Q ss_pred ceEEEecCC----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcceeeeeee
Q psy15191 66 KDLVSCSLD----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGLWLETAR 128 (312)
Q Consensus 66 ~~l~s~~~d----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~ 128 (312)
.+++.|+.+ ..+..||+.+.....+...+. ..++..++.|+.+ ..+.+||..+.+ +.....
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTE--EEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCc--eeeCCC
Confidence 455555543 346677766654321111111 1133455666644 357788887743 322211
Q ss_pred ecccCCCccceeEEEECCCCCeEEEeecCCe-----EEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecC--
Q psy15191 129 VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS-----LHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-- 198 (312)
Q Consensus 129 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 198 (312)
++........+.+ +++.++.|+.++. +.. |+ .+|.....+.........+.+ +++.++.|+.+
T Consensus 95 ---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 95 ---MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVA 167 (302)
T ss_dssp ---CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred ---CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCC
Confidence 1112222222222 5677777776542 333 43 345544433322222222222 56667776643
Q ss_pred -----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCCCCCccccccc
Q psy15191 199 -----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEPPTEEDLVQNT 268 (312)
Q Consensus 199 -----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~ 268 (312)
..+.+||+.+.+-.. +..... .......+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~-~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~---------- 230 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTY-IAEMST----RRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN---------- 230 (302)
T ss_dssp TTEECCCEEEEETTTTEEEE-ECCCSS----CCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT----------
T ss_pred CCccccEEEEEeCCCCcEEE-CCCCcc----ccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC----------
Confidence 348889987654322 221111 1111122222 677888887643 6888887654
Q ss_pred ccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 269 LWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 269 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
.|..+..+......- + +...++++++.|+.++.
T Consensus 231 ~W~~~~~~~~~r~~~-~-~~~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 231 AWRQVADMNMCRRNA-G-VCAVNGLLYVVGGDDGS 263 (302)
T ss_dssp EEEEECCCSSCCBSC-E-EEEETTEEEEECCBCSS
T ss_pred CEeeCCCCCCccccC-e-EEEECCEEEEECCcCCC
Confidence 233333222111111 1 22236788888876543
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.16 E-value=0.045 Score=44.17 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=79.3
Q ss_pred cceeEEEECCCCCeEEEeecCCeEEE-ecccCc-eeeeec---ccCCceeEEEECCC---CCEEEEEec----C----Ce
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-QIQTLP---CHQLTITQLAFSPD---DTHLVSVSR----D----RR 200 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~~ 200 (312)
.....++|.|+|+ |+++..+|.|++ +. +.+ ....+. ........|+++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4468899999998 455566688877 42 222 222111 12356889999997 444544433 3 56
Q ss_pred EEEEEccCCC-----eEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCCCCc
Q psy15191 201 WGLYKRQSSG-----RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPPTEE 262 (312)
Q Consensus 201 i~~wd~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~ 262 (312)
|..|+..... ....+..... ...| ....++|.|+|.++++.+. .|.|.-++........
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~-~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPG-AYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEEC-CSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCC-CCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 7777766431 1111111110 1112 2457999999987776543 2455555543211000
Q ss_pred ccccccccceeEEeeccCcceeEEEecc-CCCeEEEE
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASH-DGTLLASA 298 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~ 298 (312)
.... . ..+. ..++. ....++|+| +|+++++-
T Consensus 184 npf~-~--~~i~-a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 184 NPFP-N--SPIW-SYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp SSST-T--CCEE-EECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCC-C--CcEE-EEccC-CcceEEEeCCCCCEEEEe
Confidence 0000 0 0111 12343 357899999 67766654
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.15 E-value=0.071 Score=43.03 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=42.2
Q ss_pred eeeEEEEEc-------CCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEe-eccCcceeEEEeccCCCeEEEE
Q psy15191 227 RIIWGVAWS-------HDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL-YGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 227 ~~v~~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
..+..++|. .+|.++++....+.|...++....... ....+ .+....+..+++.|||.++++.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~---------~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVR---------KISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEE---------EEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCccc---------ceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 346778883 577888877778888888876432100 11122 2234578999999999887776
Q ss_pred e
Q psy15191 299 C 299 (312)
Q Consensus 299 s 299 (312)
.
T Consensus 330 ~ 330 (354)
T 3a9g_A 330 S 330 (354)
T ss_dssp C
T ss_pred e
Confidence 4
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.13 E-value=0.14 Score=46.13 Aligned_cols=195 Identities=9% Similarity=-0.074 Sum_probs=109.7
Q ss_pred cCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCc----ccc--------cccccCCCC-CceEEEEeCCCcEEE
Q psy15191 47 KSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEG----NYL--------PYHMRDDSK-QLHLLSCSMDKSIIV 113 (312)
Q Consensus 47 ~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~----~~~--------~~~~~~~~~-~~~l~~~~~d~~i~i 113 (312)
...+..|+|.+. ++.++++-...+.|+.+++.... ... +.-++.... +.++++-...+.|.+
T Consensus 423 ~~~~~gl~~d~~-----~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 423 LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp CSSEEEEEEETT-----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceEEEeeccc-----CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEE
Confidence 456788999875 24566666667888888886531 111 111111222 234445555677777
Q ss_pred EcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCC
Q psy15191 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDT 190 (312)
Q Consensus 114 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (312)
.++.......+.. ........|+++|.+..|+.+.. .+.|.. ++..-.........-.....|++++.+.
T Consensus 498 ~~ldG~~~~~l~~-------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 498 ADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 570 (791)
T ss_dssp EETTSSSEEEEEE-------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTT
T ss_pred EeCCCCeEEEEEe-------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCC
Confidence 7776432211111 22334789999998666666543 256666 5543333333333335678999998666
Q ss_pred EEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 191 HLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 191 ~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.|+.+ ...+.|...++........+.... .-....+|++.. +.++++-...+.|...+..++.
T Consensus 571 ~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~-----~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 571 RLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEeCCCCcEEEEecCCCceEEEecCCC-----ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 66655 455789999998665555444311 111234566643 3455555667788888866654
No 311
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.11 E-value=0.07 Score=42.27 Aligned_cols=213 Identities=9% Similarity=-0.053 Sum_probs=117.4
Q ss_pred CceEEEEEeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecC----Cccccc--------cc
Q psy15191 25 SKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS----EGNYLP--------YH 92 (312)
Q Consensus 25 ~~v~~~~w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~----~~~~~~--------~~ 92 (312)
..|..+ +.++.+....+.. ...+..++|.+. ++.++++-...+.|..+++.. .....+ ..
T Consensus 10 ~~I~~i--~~~~~~~~~~~~~-~~~p~g~~~d~~-----~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKM--TLDRSEYTSLIPN-LRNVVALDTEVA-----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEE--ETTSCCCEEEECS-CSSEEEEEEETT-----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEE--ECCCcceEehhcC-CCceEEEEEEeC-----CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 345443 4555544444443 456789999875 145556666678899998875 121111 11
Q ss_pred ccCCC-CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecC--CeEEE-ecccCc
Q psy15191 93 MRDDS-KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ--GSLHL-DVTTWK 168 (312)
Q Consensus 93 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~-d~~~~~ 168 (312)
+.... .+.++++-...+.|.+.++.......+. .........++++|.+..|+.+... +.|.. ++.. .
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~ 153 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 153 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-C
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-------ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-C
Confidence 11111 2233344455667777776642211111 1122456889999977666655443 56665 5432 2
Q ss_pred eeeee-cccCCceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191 169 QIQTL-PCHQLTITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 169 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
....+ ...-...+.|+++|++..|+.+. ..+.|..+|+............. ......++++. .+.++++-..
T Consensus 154 ~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~-----~~~~P~giav~-~~~ly~~d~~ 227 (316)
T 1ijq_A 154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVF-EDKVFWTDII 227 (316)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEE-TTEEEEEETT
T ss_pred CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC-----ccCCcEEEEEE-CCEEEEEECC
Confidence 22222 12234578999998776666554 56789999998544333333211 11234567775 4666667777
Q ss_pred CCeEEEEecCCCC
Q psy15191 247 DGVCVVWGLGEPP 259 (312)
Q Consensus 247 dg~i~iwd~~~~~ 259 (312)
.+.|..++..++.
T Consensus 228 ~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 228 NEAIFSANRLTGS 240 (316)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEeCCCCc
Confidence 8899999876554
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.08 E-value=0.0092 Score=52.99 Aligned_cols=113 Identities=11% Similarity=-0.039 Sum_probs=64.6
Q ss_pred ceeEEEECCCCCeE-EEeecCCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec--CCeEEEEEccCCCeEE
Q psy15191 138 GFYGCKFGPRGDYI-IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR--DRRWGLYKRQSSGRLS 213 (312)
Q Consensus 138 ~v~~~~~~~~~~~l-~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~~~~~ 213 (312)
.+..+++.+.+..| ++-...+.|.+ ++........+.........|+++|.+.+|+.+.. .+.|..+++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 35668888654444 44345566766 55433322222222345678899996555554432 2678888776433322
Q ss_pred EEeccCCCCcccceeeEEEEEcCCCceE-EEeccCCeEEEEecCC
Q psy15191 214 LVACSDKTNGVHKRIIWGVAWSHDSRYF-LTISRDGVCVVWGLGE 257 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~ 257 (312)
.+.. .....+.|+|+|++..| ++-+..+.|.++++..
T Consensus 534 l~~~-------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 534 LVTE-------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp ESCS-------SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEeC-------CCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 2211 12235679999876554 4445677899999864
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.98 E-value=0.12 Score=43.37 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=58.0
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEE-ecccCcee--eeec------ccCCceeEEEECCC---CCEEEEEe-c-------
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI--QTLP------CHQLTITQLAFSPD---DTHLVSVS-R------- 197 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~--~~~~------~~~~~v~~~~~~~~---~~~l~~~~-~------- 197 (312)
....|+|.|+|+++++-...+.|++ +..+.... ..+. .....+..|+|+|+ +..|+.+. .
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4678999999986666444445665 44333322 2222 12456779999995 44444443 2
Q ss_pred -----CCeEEEEEccCCC-e----EEEEeccCCCCcccceeeEEEEEcCCCceEEEecc
Q psy15191 198 -----DRRWGLYKRQSSG-R----LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246 (312)
Q Consensus 198 -----d~~i~~wd~~~~~-~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 246 (312)
...|.-++..... . ...+..... . .......++|.|||.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~--~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-S--KDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-C--SSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCC-C--CCCCCCeEeECCCCeEEEEECC
Confidence 2346666654321 1 112211111 1 1223678999999997776553
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.90 E-value=0.12 Score=41.47 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=81.3
Q ss_pred cceeEEEECCCCCeEEEeecCCeEEE-ecccCce--eeee----cccCCceeEEEECCC---CCEEEEE---ecCCeEEE
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ--IQTL----PCHQLTITQLAFSPD---DTHLVSV---SRDRRWGL 203 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~~ 203 (312)
.....|+|.|+|+.+++--..|.|++ +..+.+. +..+ .........|+++|+ +..|+.. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45689999999986666544788877 5433332 1111 123456889999995 3334332 23455666
Q ss_pred EEccCC--------CeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-------------CCeEEEEecCCCCCCc
Q psy15191 204 YKRQSS--------GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-------------DGVCVVWGLGEPPTEE 262 (312)
Q Consensus 204 wd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~ 262 (312)
|..... .....+..... ...|. ...++|.|||.+.++.+. .|.|.-.+........
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~--g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPK-GVIHN--GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECC-CSSCC--CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEeCCCCcccccCCCcEEEEEcCCC-CCCcc--CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 665541 11122221111 11132 457999999988777543 2444444433211100
Q ss_pred ccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 263 DLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
..... ..+. -.+|. ....++|+|+|.+.++-
T Consensus 189 nPf~~---~~i~-a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 189 NPFPG---SPVY-SYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CSSTT---CCEE-EBCCS-BCCEEEECTTCCEEEEE
T ss_pred CCCCC---CeEE-eeCCC-CcceEEECCCCCEEEEe
Confidence 00000 0111 22454 45689999998877654
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.87 E-value=0.11 Score=40.81 Aligned_cols=211 Identities=8% Similarity=0.048 Sum_probs=101.3
Q ss_pred CceEEEecCC----CcEEEeeecCCcccccccccC--------CCCCceEEEEeC----C-----CcEEEEcCCCCccee
Q psy15191 65 HKDLVSCSLD----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSM----D-----KSIIVWAPDPTTGLW 123 (312)
Q Consensus 65 ~~~l~s~~~d----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~----d-----~~i~i~d~~~~~~~~ 123 (312)
+.+++.|+.+ ..+.+||..+.+...+...+. ..++..++.|+. + ..+.+||+.+.+ +
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W 102 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--W 102 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE--E
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe--E
Confidence 4566666632 357788877655422211111 113345555554 2 457888887743 3
Q ss_pred eeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191 124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSV 195 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (312)
..... ++........+.+ +++.++.|+.++ .+.. |+. +|.....+......-..+.+ ++..++.|
T Consensus 103 ~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 103 SPCAP---MSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp EECCC---CSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred eECCC---CCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 22211 1112222222232 667777776543 2333 443 45544433322222222333 56777777
Q ss_pred ecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCCCCCcccc
Q psy15191 196 SRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEPPTEEDLV 265 (312)
Q Consensus 196 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~ 265 (312)
+.+ ..+.+||+.+.+-. .+..... .......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~------- 241 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWR-MITAMNT----IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE------- 241 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEE-ECCCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT-------
T ss_pred CCCCCCcCceEEEEeCCCCeEe-eCCCCCC----ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC-------
Confidence 654 45888998765322 2221111 1111122333 67778888764 46888888654
Q ss_pred cccccceeEEeeccCcceeEEEeccCCCeEEEEecCCC
Q psy15191 266 QNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATK 303 (312)
Q Consensus 266 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~ 303 (312)
.|..+..+....... +++ .-++++++.|+.++.
T Consensus 242 ---~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~ 274 (308)
T 1zgk_A 242 ---TWTFVAPMKHRRSAL-GIT-VHQGRIYVLGGYDGH 274 (308)
T ss_dssp ---EEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSS
T ss_pred ---cEEECCCCCCCccce-EEE-EECCEEEEEcCcCCC
Confidence 233333222111111 122 236788888876543
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.83 E-value=0.12 Score=40.51 Aligned_cols=221 Identities=10% Similarity=0.030 Sum_probs=105.9
Q ss_pred CeEEEEeccCCCceEEEEEeCCCCceEE--EEccccCcEEEEEEecCcCcCCCCceEEEecCC----CcEEEeeecCCcc
Q psy15191 14 GKVLYTLTNHKSKVMAVKWNGEGGKVLY--TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD----KTAILWKYVSEGN 87 (312)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~w~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d----g~i~vw~~~~~~~ 87 (312)
.+.++.+.|....-....||+.+.+-.. .+......-..+. -+ +.+++.|+.+ ..+.+||..+..-
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~------~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WD------NVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ET------TEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--EC------CEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 3566777665432223446776654221 1111111111111 23 5677788755 5678888877653
Q ss_pred cccccccC--------CCCCceEEEEeCC------CcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEE
Q psy15191 88 YLPYHMRD--------DSKQLHLLSCSMD------KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIA 153 (312)
Q Consensus 88 ~~~~~~~~--------~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 153 (312)
..+...+. ..++..++.|+.+ ..+.+||+.+.+ +..... ++........+. -+++.++.
T Consensus 83 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~---~p~~r~~~~~~~--~~~~iyv~ 155 (306)
T 3ii7_A 83 YSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKPS---MLTQRCSHGMVE--ANGLIYVC 155 (306)
T ss_dssp EEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEECC---CSSCCBSCEEEE--ETTEEEEE
T ss_pred EECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCC---CcCCcceeEEEE--ECCEEEEE
Confidence 21111111 1133456666654 457888888743 322211 111112222222 25667777
Q ss_pred eecCC---------eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEEecC-----CeEEEEEccCCCeEEEEe
Q psy15191 154 HGFQG---------SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-----RRWGLYKRQSSGRLSLVA 216 (312)
Q Consensus 154 ~~~~~---------~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~ 216 (312)
|+.++ .+.. |+ .+|.....+......-..+.+ +++.++.|+.+ ..+.+||+.+.+- ..+.
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W-~~~~ 232 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEW-KMVS 232 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEE-EECC
T ss_pred CCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcE-EECC
Confidence 76432 2333 44 345555433322222222222 56677777654 4588999876532 2222
Q ss_pred ccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCC
Q psy15191 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEP 258 (312)
Q Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~ 258 (312)
.... .......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 233 ~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 233 PMPW----KGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CCSC----CBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCC----CccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 1111 1111222333 67788888754 46888887654
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.60 E-value=0.21 Score=40.25 Aligned_cols=63 Identities=17% Similarity=0.280 Sum_probs=40.7
Q ss_pred eeeEEEEEcC-------CCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEE
Q psy15191 227 RIIWGVAWSH-------DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 227 ~~v~~~~~~~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 298 (312)
..+..++|.. +|.++++.-..+.|...++..+... .....+......+.++++.|||.++++.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~---------~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT---------EDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE---------EEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe---------eeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 3567788863 5778887777888888887643100 0111122334578999999999977764
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.45 E-value=0.22 Score=38.84 Aligned_cols=178 Identities=13% Similarity=0.135 Sum_probs=89.9
Q ss_pred CceEEEecCC-----CcEEEeeecCCc---ccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCccee
Q psy15191 65 HKDLVSCSLD-----KTAILWKYVSEG---NYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGLW 123 (312)
Q Consensus 65 ~~~l~s~~~d-----g~i~vw~~~~~~---~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 123 (312)
+.+++.|+.+ ..+.+||..+.. ...+...+. ..++..++.|+.+ ..+.+||+.+.+ +
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W 140 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--W 140 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--E
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe--E
Confidence 5677778765 358889988776 321111111 1133455566543 357788887743 3
Q ss_pred eeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191 124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVSV 195 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (312)
..... ++........+.+ +++.++.|+.++ .+.. |+ .+|.....+.........+.+ +++.++.|
T Consensus 141 ~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 213 (301)
T 2vpj_A 141 SMLGD---MQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVG 213 (301)
T ss_dssp EEEEE---CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred EECCC---CCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEe
Confidence 22221 1111122222222 667777777543 2444 54 455555433322222222233 56777777
Q ss_pred ecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccC-----CeEEEEecCCC
Q psy15191 196 SRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-----GVCVVWGLGEP 258 (312)
Q Consensus 196 ~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~ 258 (312)
+.+ ..+.+||+.+.+-. .+..... .......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWT-TVTSMTT----PRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEE-EECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCCcEE-ECCCCCC----cccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 764 46899999865433 2221111 1111122223 67788888765 35778887654
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.45 E-value=0.23 Score=38.85 Aligned_cols=178 Identities=13% Similarity=0.111 Sum_probs=88.7
Q ss_pred CceEEEecCCC-----cEEEeeecCCcccccccccC--------CCCCceEEEEeCCC-----cEEEEcCCCCcceeeee
Q psy15191 65 HKDLVSCSLDK-----TAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMDK-----SIIVWAPDPTTGLWLET 126 (312)
Q Consensus 65 ~~~l~s~~~dg-----~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~ 126 (312)
+.+++.|+.++ .+.+||..+..-..+...+. ..++..++.|+.++ .+.+||+.+.+ +...
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~ 139 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE--WFHV 139 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE--EEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe--Eeec
Confidence 56777887553 47788877655322111111 11334566666543 46778887643 3222
Q ss_pred eeecccCCCccceeEEEECCCCCeEEEeecCC-------eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEe
Q psy15191 127 ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-------SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196 (312)
Q Consensus 127 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (312)
.. ++........+.+ +++.++.|+.++ .+.. |+. +|.....+.........+.+ +++.++.|+
T Consensus 140 ~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 212 (302)
T 2xn4_A 140 AP---MNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGG 212 (302)
T ss_dssp CC---CSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CC---CCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECC
Confidence 11 1111222222222 566777776432 2333 543 45555444322222222232 567777777
Q ss_pred cC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCC
Q psy15191 197 RD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEP 258 (312)
Q Consensus 197 ~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~ 258 (312)
.+ ..+.+||+.+.+- ..+..... .......+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 213 ~~~~~~~~~~~~yd~~~~~W-~~~~~~~~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDPTTNAW-RQVADMNM----CRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp BSSSSBCCCEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCcccceEEEEeCCCCCE-eeCCCCCC----ccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 64 3688999876533 22221111 1111112222 677888887654 4888887664
No 320
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.42 E-value=0.65 Score=43.82 Aligned_cols=90 Identities=13% Similarity=0.235 Sum_probs=54.8
Q ss_pred EEE-ecccCceeeeec-ccCCceeEEE---ECCC-CCEEEEEe----------cCCeEEEEEccCCCeEEEEeccCCCCc
Q psy15191 160 LHL-DVTTWKQIQTLP-CHQLTITQLA---FSPD-DTHLVSVS----------RDRRWGLYKRQSSGRLSLVACSDKTNG 223 (312)
Q Consensus 160 i~~-d~~~~~~~~~~~-~~~~~v~~~~---~~~~-~~~l~~~~----------~d~~i~~wd~~~~~~~~~~~~~~~~~~ 223 (312)
+++ |..+|+....+. .....+.+++ |..+ ..+|+.|+ ..|.|++|++... .+..+....
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~---- 883 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKE---- 883 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEE----
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEE----
Confidence 555 888888776554 2334455544 4332 46788776 2478999999743 333332211
Q ss_pred ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 224 VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
.+++|++++-- +|++|++. ..+|++|++...
T Consensus 884 -v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 884 -VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTE 914 (1158)
T ss_dssp -ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTT
T ss_pred -cCCcCEEEeee-CCEEEEEc--CCEEEEEECCCC
Confidence 55678887643 46555543 468999999765
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.37 E-value=0.27 Score=38.85 Aligned_cols=185 Identities=11% Similarity=0.146 Sum_probs=106.2
Q ss_pred CceEEEecCCCcEEEeeecCCccccc-------ccccC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee-cccCCC
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNYLP-------YHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV-GEVGGN 135 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~~~-------~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~ 135 (312)
.+.+|.=. ..+++++|+++...+.. .+-.| +++ .|+-.+ +..|+-|++.... ...+.+.. ..+ .
T Consensus 78 ~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s-~P~kvFdR~~~L--~ 150 (365)
T 2xzh_A 78 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSL--A 150 (365)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTC-CCEEEEECCGGG--T
T ss_pred ccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCC--eEEEEc-CCcEEEEcccCCC-CCceeeecchhc--c
Confidence 66666554 67899999999876432 22222 333 232222 3569999987532 22222221 222 2
Q ss_pred ccceeEEEECCCCCeEEEeec---C----CeEEEecccCceeeeecccCCceeEEEECCC---CCEEEEEecC---CeEE
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGF---Q----GSLHLDVTTWKQIQTLPCHQLTITQLAFSPD---DTHLVSVSRD---RRWG 202 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~---~----~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d---~~i~ 202 (312)
...|..-..+++.++++..+- + |.+.+-....+..+.+++|......+.+..+ ...|+.+... +.++
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 456777888999999776542 3 3444423334445556677665555444321 1233433332 5788
Q ss_pred EEEccCC---C-----eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 203 LYKRQSS---G-----RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 203 ~wd~~~~---~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+-++... . ....+..+.+ .......++..++....+..-+.-|.|++||++++.
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppe---a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTT---CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEcCCCCCCCCCcccccceeeCCcc---ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 8888543 1 1111111111 134445678888888888888999999999999985
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.06 E-value=0.31 Score=40.74 Aligned_cols=118 Identities=11% Similarity=0.092 Sum_probs=63.3
Q ss_pred CceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCC-cccceeeEEEEEcCC---CceE-EEecc------
Q psy15191 178 LTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN-GVHKRIIWGVAWSHD---SRYF-LTISR------ 246 (312)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l-~s~~~------ 246 (312)
.....|+|.|+|+++++-...+.|++++..+.............. ......+..|+|+|+ +.+| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 345799999999977765444578888765444322222211110 012456789999995 4444 43332
Q ss_pred ------CCeEEEEecCCCCCCcccccccccceeE-Eeec-cCcceeEEEeccCCCeEEEEec
Q psy15191 247 ------DGVCVVWGLGEPPTEEDLVQNTLWPEVQ-KLYG-HGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 247 ------dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
...|.-|++...... +. ..+.+. .+.. .......|+|.|||.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~--~~---~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDT--LE---KPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTE--EE---EEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCC--cC---CcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555655432110 00 001111 1221 1224688999999998888654
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.04 E-value=0.39 Score=37.64 Aligned_cols=178 Identities=11% Similarity=0.064 Sum_probs=87.4
Q ss_pred CceEEEecC----C-----CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC-----CcEEEEcCCCCcce
Q psy15191 65 HKDLVSCSL----D-----KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD-----KSIIVWAPDPTTGL 122 (312)
Q Consensus 65 ~~~l~s~~~----d-----g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 122 (312)
+.+++.|+. + ..+.+||..+..-..+...+. ..++..++.|+.+ ..+.+||+.+.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 148 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE-- 148 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE--
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe--
Confidence 567777776 2 357788877665322211111 1133355555533 357788887633
Q ss_pred eeeeeeecccCCCccceeEEEECCCCCeEEEeecCC-----eEEE-ec--ccCceeeeecccCCceeEEEECCCCCEEEE
Q psy15191 123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG-----SLHL-DV--TTWKQIQTLPCHQLTITQLAFSPDDTHLVS 194 (312)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~-d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (312)
+..... ++........+.+ +++.++.|+.++ .+.. |+ .+|.....+.........+.+ +++.++.
T Consensus 149 W~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 221 (308)
T 1zgk_A 149 WHLVAP---MLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAA 221 (308)
T ss_dssp EEECCC---CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred EeECCC---CCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEE
Confidence 322211 1112222222233 567777776543 2333 44 345554443322222222333 6677777
Q ss_pred EecC-----CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCC
Q psy15191 195 VSRD-----RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEP 258 (312)
Q Consensus 195 ~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~ 258 (312)
|+.+ ..+.+||+.+.+- ..+..... .......+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 222 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 222 GGYDGQDQLNSVERYDVETETW-TFVAPMKH----RRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CCBCSSSBCCCEEEEETTTTEE-EECCCCSS----CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred eCCCCCCccceEEEEeCCCCcE-EECCCCCC----CccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 7765 4589999886532 22221111 1111122222 677788877543 5777877654
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.00 E-value=0.78 Score=40.76 Aligned_cols=195 Identities=10% Similarity=0.036 Sum_probs=92.3
Q ss_pred eEEEEeCC----CcEEEEcCCCCcceeee-eeeecccCCCccceeEEEECCCCCeEEEeecCC------eEEE-eccc--
Q psy15191 101 HLLSCSMD----KSIIVWAPDPTTGLWLE-TARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG------SLHL-DVTT-- 166 (312)
Q Consensus 101 ~l~~~~~d----~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------~i~~-d~~~-- 166 (312)
.++.|+.+ ..+.+||..+.+-..+. ..+....+........+.+..+++.++.|+.++ .+.+ |..+
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE 479 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence 45555532 45777887764322221 100011112222222333332777778877543 2333 5544
Q ss_pred CceeeeecccCCceeEEEECCCCCEEEEEecCC--eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCC-CceEEE
Q psy15191 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDR--RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD-SRYFLT 243 (312)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s 243 (312)
|.....+...... .+++.-.++..++.|+.++ .+.+||..+.. ...+........ ......++.+..+ +++++.
T Consensus 480 W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~-~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 480 WSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQ-NSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp EEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGG-SCCBSCEEEEETTTTEEEEE
T ss_pred EEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCC-cccceeEEEEeCCCCEEEEE
Confidence 6666544422222 2233324788888887654 68999988654 222221100000 1112233555555 677777
Q ss_pred ecc--C-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 244 ISR--D-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 244 ~~~--d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
|+. + +.+.+||+.+..- . ..-.|..+.........-.+++...++++++.||.++
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w-~---~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENA-T---EPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCS-S---CCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCS
T ss_pred CCcCCCCCeeeCcEEEEEccCCcc-c---cceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccC
Confidence 765 2 3688999877631 0 0111333333211111111233334478888887643
No 325
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.81 E-value=0.26 Score=41.30 Aligned_cols=121 Identities=11% Similarity=0.047 Sum_probs=62.8
Q ss_pred ceeEEEECCCCC-EEEEEecCCeEEEEEccCCC---eEEEEeccCCCC--cccceeeEEEEEcCC----CceEEEecc--
Q psy15191 179 TITQLAFSPDDT-HLVSVSRDRRWGLYKRQSSG---RLSLVACSDKTN--GVHKRIIWGVAWSHD----SRYFLTISR-- 246 (312)
Q Consensus 179 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~--~~~~~~v~~~~~~~~----~~~l~s~~~-- 246 (312)
....|+|.|||. .|+.+...|.|++++..... .+..+....... ......+..|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 457899999996 45556788999999754221 111111100000 002456789999996 444443322
Q ss_pred C----------CeEEEEecCCCCCC-cccccccccceeEEee--ccCcceeEEEeccCCCeEEEEecCC
Q psy15191 247 D----------GVCVVWGLGEPPTE-EDLVQNTLWPEVQKLY--GHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 247 d----------g~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
+ ..|.-|.+...... ..... .+.+..+. ........|+|.|||.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~---~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRT---ARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGG---CEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCC---ceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444665432111 00000 01222222 1122357899999999888876543
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.46 E-value=0.7 Score=36.30 Aligned_cols=173 Identities=12% Similarity=0.079 Sum_probs=80.7
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-----C--C----eEEE-ecc--c
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-----Q--G----SLHL-DVT--T 166 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~--~----~i~~-d~~--~ 166 (312)
+++.|+ ..+.+||..+.+ +.. .. ++.............++..++.|+. . . .+.. |.. +
T Consensus 7 l~~~GG--~~~~~yd~~~~~--W~~-~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE--CYC-AS---LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE 78 (315)
T ss_dssp EEEEET--TEEEEEETTTTE--EEE-EE---CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred EEEEcC--CceEEECCCCCe--Eec-CC---CCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence 344455 568888888743 432 11 1111112223333457777777774 1 1 1333 544 3
Q ss_pred CceeeeecccCCceeEEEECCCCCEEEEEecC--------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD--------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
|.....+.........+.+ ++..++.|+.+ ..+.+||..+.+- ..+..... .......+. .++
T Consensus 79 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~----~r~~~~~~~--~~~ 149 (315)
T 4asc_A 79 WLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPY----VVYGHTVLS--HMD 149 (315)
T ss_dssp EEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSS----CCBSCEEEE--ETT
T ss_pred EEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCC----cccceeEEE--ECC
Confidence 5444333311111122222 56667777642 4588899876532 22221111 111111222 366
Q ss_pred ceEEEecc-C-----CeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 239 RYFLTISR-D-----GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 239 ~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
++++.|+. + ..+.+||..+. .|..+..+......-..+ .-++++++.|+.++
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~----------~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKF----------EWKELAPMQTARSLFGAT--VHDGRIIVAAGVTD 207 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTT----------EEEECCCCSSCCBSCEEE--EETTEEEEEEEECS
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCC----------eEEECCCCCCchhceEEE--EECCEEEEEeccCC
Confidence 77777776 2 36888887654 233333222111111112 23677888887654
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.38 E-value=0.3 Score=39.22 Aligned_cols=52 Identities=4% Similarity=-0.085 Sum_probs=24.7
Q ss_pred eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC------eEEEEecCCC
Q psy15191 200 RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG------VCVVWGLGEP 258 (312)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~ 258 (312)
.+.+||+.+.+-...-..+.. .....++. .++++++.|+.++ .|.++++...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~-----r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~ 343 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQG-----RAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDN 343 (357)
T ss_dssp CCEEEECC---CEEEEECSSC-----CBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CC
T ss_pred eEEEEecCCCceeeCCCCCCC-----cccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCc
Confidence 477899886543332221111 11111222 3678888887543 4556677665
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.13 E-value=0.9 Score=35.65 Aligned_cols=178 Identities=9% Similarity=0.057 Sum_probs=85.2
Q ss_pred CceEEEecC----C-------CcEEEeeecCCcccccccccC--------CCCCceEEEEeCC--------CcEEEEcCC
Q psy15191 65 HKDLVSCSL----D-------KTAILWKYVSEGNYLPYHMRD--------DSKQLHLLSCSMD--------KSIIVWAPD 117 (312)
Q Consensus 65 ~~~l~s~~~----d-------g~i~vw~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d--------~~i~i~d~~ 117 (312)
+.+++.|+. + ..+.+||..+.+-..+...+. .-++..++.|+.+ ..+.+||+.
T Consensus 46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~ 125 (315)
T 4asc_A 46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL 125 (315)
T ss_dssp CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT
T ss_pred CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC
Confidence 677777773 1 126677776654321111111 1133355555532 457888887
Q ss_pred CCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec-C-----CeEEE-ecc--cCceeeeecccCCceeEEEECCC
Q psy15191 118 PTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF-Q-----GSLHL-DVT--TWKQIQTLPCHQLTITQLAFSPD 188 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-----~~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~ 188 (312)
+.+ +..... ++........+. .+++.++.|+. + ..+.. |+. +|.....+.........+.+ +
T Consensus 126 ~~~--W~~~~~---~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 196 (315)
T 4asc_A 126 SFK--WGESDP---LPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--D 196 (315)
T ss_dssp TTE--EEECCC---CSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T
T ss_pred CCc--EeECCC---CCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--C
Confidence 743 322211 111222222222 35667777775 2 23444 544 45555443322222222223 6
Q ss_pred CCEEEEEecCC-----eEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC--------------e
Q psy15191 189 DTHLVSVSRDR-----RWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--------------V 249 (312)
Q Consensus 189 ~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------~ 249 (312)
++.++.|+.++ .+.+||+.+.+- ..+..... .......+.+ ++++++.|+.++ .
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~----~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~ 269 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKW-APFEAFPQ----ERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELND 269 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEE-EEECCCSS----CCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeE-EECCCCCC----cccceeEEEE--CCEEEEECCccccCcCCccccccccCc
Confidence 67777777654 488889876532 22222111 1111122223 667777777532 4
Q ss_pred EEEEecCCC
Q psy15191 250 CVVWGLGEP 258 (312)
Q Consensus 250 i~iwd~~~~ 258 (312)
+.+||+.+.
T Consensus 270 v~~yd~~~~ 278 (315)
T 4asc_A 270 IWRYNEEEK 278 (315)
T ss_dssp EEEEETTTT
T ss_pred EEEecCCCC
Confidence 667777554
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.14 Score=40.77 Aligned_cols=106 Identities=6% Similarity=-0.051 Sum_probs=58.6
Q ss_pred ceEEEecCCCcEEEeeecCCccc-----c----ccccc--CC-CCCceEEEE-eCCCcEEEEcCCCCcceeeeeeeeccc
Q psy15191 66 KDLVSCSLDKTAILWKYVSEGNY-----L----PYHMR--DD-SKQLHLLSC-SMDKSIIVWAPDPTTGLWLETARVGEV 132 (312)
Q Consensus 66 ~~l~s~~~dg~i~vw~~~~~~~~-----~----~~~~~--~~-~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~ 132 (312)
..++.++.||.|.-.|..+++.. . +.... .. .++..++.. +.||.|..++..++... .......+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~--~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK--LPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE--EEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE--eeeccccc
Confidence 46677777777777776666541 0 11100 01 122333343 68999999998874332 22222111
Q ss_pred CCCccceeE---EEE-C----CCCCeEEEeecCCeEEE-ecccCceeeeec
Q psy15191 133 GGNTLGFYG---CKF-G----PRGDYIIAHGFQGSLHL-DVTTWKQIQTLP 174 (312)
Q Consensus 133 ~~~~~~v~~---~~~-~----~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~ 174 (312)
. ...++.. ... . ..+..+++|+.+|.+.- |.++++.+..+.
T Consensus 89 v-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 V-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp H-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred e-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1 1111111 000 0 14567888999998887 999999988876
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.95 E-value=1.5 Score=37.39 Aligned_cols=78 Identities=15% Similarity=0.232 Sum_probs=45.3
Q ss_pred eeEEEEEcCCCceEEEec-cCCeEEEEecCCCCCC--cccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCCCc
Q psy15191 228 IIWGVAWSHDSRYFLTIS-RDGVCVVWGLGEPPTE--EDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKATKP 304 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~~~ 304 (312)
....+..+|||++++.++ .+.++.++|+..-... ..+...+. ..+.... -.......+|.++|....|---|++
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq- 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ- 400 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECCB-CCSCEEEEEECSSSEEEEEETTTTE-
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeecc-CCCcccEEEECCCCceEeeeeecce-
Confidence 345688999999988766 5779999998742110 00000000 0122222 2345678899999965555534444
Q ss_pred ccceEEeC
Q psy15191 305 EHAAIIIW 312 (312)
Q Consensus 305 ~dg~i~iW 312 (312)
|.-|
T Consensus 401 ----vvkW 404 (638)
T 3sbq_A 401 ----VVKW 404 (638)
T ss_dssp ----EEEE
T ss_pred ----EEEE
Confidence 7666
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.87 E-value=1.4 Score=36.45 Aligned_cols=187 Identities=11% Similarity=0.132 Sum_probs=108.5
Q ss_pred CceEEEecCCCcEEEeeecCCcccccccc-------cC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee-cccCCC
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNYLPYHM-------RD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV-GEVGGN 135 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-------~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~ 135 (312)
.+.+|.=. ..+++|+|+++...+....+ .| +++ .|+-. .+..|+-|++.... ...+.+.. ..+ .
T Consensus 77 ~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~--~l~lV-T~taVyHWsi~~~s-~P~kvFdR~~~L--~ 149 (494)
T 1bpo_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALV-TDNAVYHWSMEGES-QPVKMFDRHSSL--A 149 (494)
T ss_dssp SSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETT--EEEEE-CSSEEEEEESSSSC-CCEEEEECCGGG--T
T ss_pred CcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCC--eEEEE-cCCeeEEecccCCC-Cchhheecchhc--c
Confidence 66666554 67899999998876432222 22 222 23322 34579999997522 22222221 222 2
Q ss_pred ccceeEEEECCCCCeEEEee---cC----CeEEEecccCceeeeecccCCceeEEEECCCC---CEEEEEecC---CeEE
Q psy15191 136 TLGFYGCKFGPRGDYIIAHG---FQ----GSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD---THLVSVSRD---RRWG 202 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~---~~----~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d---~~i~ 202 (312)
...|..-..+++.++++..+ .+ |.+.+-....+..+.+.+|......+.+..+. ..++.+... +.++
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 45677888899999987544 23 34444223344455566787766666554321 234444432 7889
Q ss_pred EEEccCC---C-e--EEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 203 LYKRQSS---G-R--LSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 203 ~wd~~~~---~-~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
+-++... . . .......-... .......++..++....+..-+.-|.|++||++++.
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe-~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTT-STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEcCCCccCCCCccceeeeeeCCcc-cccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 9888543 0 0 11111111111 134455678888888888888999999999999985
No 332
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.87 E-value=1.8 Score=37.85 Aligned_cols=214 Identities=8% Similarity=-0.075 Sum_probs=120.7
Q ss_pred CCCceEEEEEeCCCCceEEEEc-cccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccccccc--------c
Q psy15191 23 HKSKVMAVKWNGEGGKVLYTLT-NHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH--------M 93 (312)
Q Consensus 23 h~~~v~~~~w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--------~ 93 (312)
+...|..+. .++......+. ..-..+..++|.+. ++.++++-..++.|..++++......+.. +
T Consensus 13 ~~~~I~~i~--l~~~~~~~~~~~~~~~~~~~l~~d~~-----~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 13 RRADIRRIS--LETNNNNVAIPLTGVKEASALDFDVT-----DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp ETTEEEEEE--SSCTTCEEECCCCSCSCEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred eCCcEEEEE--CCCCCcceEEEcCCCCceEEEEEECC-----CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 445565553 33333333322 12356789999986 24556666677889888876543321111 1
Q ss_pred cCC-CCCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCce
Q psy15191 94 RDD-SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQ 169 (312)
Q Consensus 94 ~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~ 169 (312)
+.. ..+.++++-...+.|.+.+++......+.. ..-.....+++.|....|+.... .+.|.. ++.....
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 111 122334444556677777776532221111 22244689999996666665542 445555 5443332
Q ss_pred eeeecccCCceeEEEECCCCCEEEEE-ecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191 170 IQTLPCHQLTITQLAFSPDDTHLVSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG 248 (312)
Q Consensus 170 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 248 (312)
.... ..-.....|++++++..|+.+ ...+.|..+|+..... ..+.. ......++++.. +.++++-...+
T Consensus 159 ~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~-------~l~~P~glav~~-~~ly~tD~~~~ 228 (628)
T 4a0p_A 159 TTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD-------DLPHPFGLTQYQ-DYIYWTDWSRR 228 (628)
T ss_dssp EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE-------CCSCEEEEEEET-TEEEEEETTTT
T ss_pred EEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec-------cCCCceEEEEEC-CEEEEecCCCC
Confidence 2222 234567899999976666655 4567899999976554 33322 122345777765 45556666678
Q ss_pred eEEEEecCCCCC
Q psy15191 249 VCVVWGLGEPPT 260 (312)
Q Consensus 249 ~i~iwd~~~~~~ 260 (312)
.|...|..++..
T Consensus 229 ~I~~~dk~tg~~ 240 (628)
T 4a0p_A 229 SIERANKTSGQN 240 (628)
T ss_dssp EEEEEETTTCCS
T ss_pred EEEEEECCCCCc
Confidence 899888766643
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.56 E-value=1.3 Score=34.76 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=65.8
Q ss_pred eEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec----CCe-------EEE-ec--cc
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF----QGS-------LHL-DV--TT 166 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~~-------i~~-d~--~~ 166 (312)
.++.|+. .+..||..+.+ +.. .... .............++..++.|+. ++. +.. |. .+
T Consensus 18 i~~~GG~--~~~~yd~~~~~--W~~-~~~~---~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENE--CYL-TALA---EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEECSS--EEEEEETTTTE--EEE-EEEC---TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred hhhcccc--ceEEECCCCCc--eec-ccCC---ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 3444443 37888887743 333 1111 11111122334456777777773 111 333 44 34
Q ss_pred CceeeeecccCCceeEEEECCCCCEEEEEecC-------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCc
Q psy15191 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD-------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR 239 (312)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (312)
|.....+.........+.+ ++..++.|+.+ ..+.+||..+.+-. .+..... ..... +++. .+++
T Consensus 90 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~----~r~~~-~~~~-~~~~ 160 (318)
T 2woz_A 90 WVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI----KVYGH-NVIS-HNGM 160 (318)
T ss_dssp EEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS----CEESC-EEEE-ETTE
T ss_pred EEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC----ccccc-EEEE-ECCE
Confidence 5544433322222222222 56677777754 34788888765332 2221111 11111 1222 3677
Q ss_pred eEEEeccC------CeEEEEecCCC
Q psy15191 240 YFLTISRD------GVCVVWGLGEP 258 (312)
Q Consensus 240 ~l~s~~~d------g~i~iwd~~~~ 258 (312)
+++.|+.+ ..+.+||+.+.
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEcCCCCCCCccceEEEEcCCCC
Confidence 77777642 35888887654
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.44 E-value=2.3 Score=37.14 Aligned_cols=143 Identities=9% Similarity=-0.096 Sum_probs=79.1
Q ss_pred cceeEEEECCCCCeEEEee-cCCeEEE-ecccCceeeeecccCCceeEEEECCC-CCEEEEEecCCeEEEEEccCCCeEE
Q psy15191 137 LGFYGCKFGPRGDYIIAHG-FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLS 213 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~-~~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~ 213 (312)
..+.+++|.+.+..|+.+. ..+.|.. ++............-.....+++.+. ++.+++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 3467889988655555544 4556655 44432222222222345678999874 4455555567899999988654433
Q ss_pred EEeccCCCCcccceeeEEEEEcCC-CceEEEe-ccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEeccC
Q psy15191 214 LVACSDKTNGVHKRIIWGVAWSHD-SRYFLTI-SRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD 291 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 291 (312)
.... .-....++++.|. |.++.+- +..+.|...++..... .......-...+.|+++++
T Consensus 429 l~~~-------~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~------------~~l~~~~l~~P~GlalD~~ 489 (619)
T 3s94_A 429 LISE-------DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR------------VVLVNTSLGWPNGLALDYD 489 (619)
T ss_dssp EECT-------TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------------EEEECSSCSCEEEEEEETT
T ss_pred EEEC-------CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc------------EEEEeCCCCCCeeeEEccc
Confidence 3321 2234678999997 4444443 2235666666543211 1111122345567777775
Q ss_pred CCeEEEE
Q psy15191 292 GTLLASA 298 (312)
Q Consensus 292 ~~~l~s~ 298 (312)
+..|..+
T Consensus 490 ~~~LY~a 496 (619)
T 3s94_A 490 EGKIYWG 496 (619)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 5444444
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.09 E-value=1.7 Score=34.13 Aligned_cols=135 Identities=14% Similarity=0.154 Sum_probs=64.6
Q ss_pred CCCeEEEeecC--C-----eEEE-ecc--cCceeeeecccCCceeEEEECCCCCEEEEEecC------CeEEEEEccCCC
Q psy15191 147 RGDYIIAHGFQ--G-----SLHL-DVT--TWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD------RRWGLYKRQSSG 210 (312)
Q Consensus 147 ~~~~l~~~~~~--~-----~i~~-d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~ 210 (312)
+++.++.|+.+ + .+.. |.. +|.....+......- +++. .+++.++.|+.+ ..+.+||..+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56777777754 1 2333 444 455444333111111 1222 366677777642 358899988654
Q ss_pred eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC-----eEEEEecCCCCCCcccccccccceeEEeeccCcceeE
Q psy15191 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG-----VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (312)
- ..+..... .......+.+ ++++++.|+.++ .+.+||+.+. .|..+..+....... +
T Consensus 187 W-~~~~~~p~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~----------~W~~~~~~p~~r~~~-~ 248 (318)
T 2woz_A 187 W-KDLAPMKT----PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN----------KWEVMTEFPQERSSI-S 248 (318)
T ss_dssp E-EEECCCSS----CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC----------CEEECCCCSSCCBSC-E
T ss_pred E-EECCCCCC----CcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC----------eEEECCCCCCcccce-E
Confidence 2 22221111 1111122222 667777776532 5778887654 243333332211111 1
Q ss_pred EEeccCCCeEEEEecCC
Q psy15191 286 LAASHDGTLLASACKAT 302 (312)
Q Consensus 286 ~~~s~~~~~l~s~s~d~ 302 (312)
+ ...++++++.|+.+.
T Consensus 249 ~-~~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 249 L-VSLAGSLYAIGGFAM 264 (318)
T ss_dssp E-EEETTEEEEECCBCC
T ss_pred E-EEECCEEEEECCeec
Confidence 2 224678888887654
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.88 E-value=2 Score=34.30 Aligned_cols=88 Identities=7% Similarity=-0.034 Sum_probs=40.5
Q ss_pred CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc------CCeEEEEecCCCCCCcccccccccce
Q psy15191 199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR------DGVCVVWGLGEPPTEEDLVQNTLWPE 272 (312)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~ 272 (312)
..+.+||..+.+-...-..+.. .... .+++.. ++++++.|+. ...+.+||+... ...|..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~----~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~--------~~~W~~ 233 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWY----GTAG-AAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGN--------NLKWNK 233 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSC----CCBS-CEEEEE-TTEEEEECCEEETTEECCCEEEEECC-----------CEEEE
T ss_pred ccEEEEeCCCCcEEECCCCCCC----Cccc-ccEEEE-CCEEEEEeeecCCCcccCceEEEEecCC--------CCcEEe
Confidence 5788999886543332221111 0110 122222 6677777764 235677776322 223444
Q ss_pred eEEeeccCcceeEEEeccCCCeEEEEec
Q psy15191 273 VQKLYGHGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 273 ~~~~~~~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
+..+..........+...++++++.|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~iyv~GG~ 261 (357)
T 2uvk_A 234 LAPVSSPDGVAGGFAGISNDSLIFAGGA 261 (357)
T ss_dssp CCCSSTTTCCBSCEEEEETTEEEEECCE
T ss_pred cCCCCCCcccccceEEEECCEEEEEcCc
Confidence 4333222211122233456788888864
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.57 E-value=3.8 Score=36.43 Aligned_cols=183 Identities=9% Similarity=0.067 Sum_probs=93.5
Q ss_pred CceEEEecCC----CcEEEeeecCCcccccc-c-----ccC--------CC--CCceEEEEeCC------CcEEEEcCCC
Q psy15191 65 HKDLVSCSLD----KTAILWKYVSEGNYLPY-H-----MRD--------DS--KQLHLLSCSMD------KSIIVWAPDP 118 (312)
Q Consensus 65 ~~~l~s~~~d----g~i~vw~~~~~~~~~~~-~-----~~~--------~~--~~~~l~~~~~d------~~i~i~d~~~ 118 (312)
+.+++.|+.+ ..+.+||..+.....+. . .+. .- ++..++.|+.+ ..+.+||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 5677777754 35778888776542222 1 111 01 44455666543 3467788776
Q ss_pred CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCC--eEEE-ecc--cCceeee---ecccCCceeEEEECCC-C
Q psy15191 119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQG--SLHL-DVT--TWKQIQT---LPCHQLTITQLAFSPD-D 189 (312)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~-d~~--~~~~~~~---~~~~~~~v~~~~~~~~-~ 189 (312)
. .+..... ++.... -.+++.-.+++.++.|+.++ .+.+ |.. +|..... ..........+.+..+ +
T Consensus 478 ~--~W~~~~~---~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 478 R--EWSMIKS---LSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp T--EEEECCC---CSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred C--cEEECCC---CCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 3 3322211 111111 12233334788888887654 3444 544 4555443 2212222333555554 6
Q ss_pred CEEEEEec--C-----CeEEEEEccCCCe-----EEEEec-cCCCCcccceeeEEEEEcCCCceEEEeccC--------C
Q psy15191 190 THLVSVSR--D-----RRWGLYKRQSSGR-----LSLVAC-SDKTNGVHKRIIWGVAWSHDSRYFLTISRD--------G 248 (312)
Q Consensus 190 ~~l~~~~~--d-----~~i~~wd~~~~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g 248 (312)
..++.|+. + ..+.+||+.+..- ...+.. +.. ...... ++...++++++.|+.+ .
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~----~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~ 626 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF----QRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTN 626 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG----CCBSCE-EEEEETTEEEEECCBCSSCCCCTTT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC----Ccccce-EEEeCCCEEEEECCccCCCCCCCCC
Confidence 67777765 2 4589999987761 222222 101 111112 2233337777777743 4
Q ss_pred eEEEEecCCC
Q psy15191 249 VCVVWGLGEP 258 (312)
Q Consensus 249 ~i~iwd~~~~ 258 (312)
.|.+||+.+.
T Consensus 627 ~v~~yd~~t~ 636 (695)
T 2zwa_A 627 SIISLDPLSE 636 (695)
T ss_dssp SEEEEETTTT
T ss_pred eEEEEECCCC
Confidence 5888988765
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.24 E-value=2 Score=36.70 Aligned_cols=117 Identities=14% Similarity=0.053 Sum_probs=69.8
Q ss_pred ceeEEEECCCCCEEEEEe-cCCeEEEEEccCCCe-----E----EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCC
Q psy15191 179 TITQLAFSPDDTHLVSVS-RDRRWGLYKRQSSGR-----L----SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG 248 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~-----~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 248 (312)
....+..+|||++++.++ .+.++.++|++.... + ..+..... ..-.....+|.++|....+.--|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e----~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE----LGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB----CCSCEEEEEECSSSEEEEEETTTT
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc----CCCcccEEEECCCCceEeeeeecc
Confidence 345688999999988765 578899999985211 0 00000000 233456789999996666777899
Q ss_pred eEEEEecCCCCCCcccccccccceeEEeeccCcceeEE-----EeccCCCeEEEEecC
Q psy15191 249 VCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSL-----AASHDGTLLASACKA 301 (312)
Q Consensus 249 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~s~~~~~l~s~s~d 301 (312)
.|.-|++...... ....+.++.+.++.-|-.+-.-. .-.|+|++|++...=
T Consensus 400 qvvkWni~~a~~~--~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 400 QVVKWNMEEAVRA--YKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp EEEEEEHHHHHHH--HTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred eEEEEeccHHHHH--hcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 9999998653100 00011123555555444332211 225889999988654
No 339
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.63 E-value=8 Score=35.82 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=32.9
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.+.+++..++..++++-+.|+++|+|++.+++.+.....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 466777888888999999999999999999887776543
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.62 E-value=4 Score=31.92 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=55.6
Q ss_pred EEECCCCCeEEEee--cCC--eEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEec-CCeEEEEEccCCCeEEEE
Q psy15191 142 CKFGPRGDYIIAHG--FQG--SLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR-DRRWGLYKRQSSGRLSLV 215 (312)
Q Consensus 142 ~~~~~~~~~l~~~~--~~~--~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~ 215 (312)
..++++++.|+-.. .++ .|.. ++..-+ ...+..+.. ..++|+++.|+-.+. ...|..-++........+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 36778888888765 233 3433 554322 223332322 456778888776554 567888887755444332
Q ss_pred eccCCCCcccceeeEEEEEcCCCceEEEeccC--CeEEEEecCCC
Q psy15191 216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD--GVCVVWGLGEP 258 (312)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~ 258 (312)
.. . .. ..+.|++.+|+-...+ ..|..-++...
T Consensus 184 ~~--------~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 184 DC--------N--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp CS--------C--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred CC--------C--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 21 1 11 2355888888765433 35555555443
No 341
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.24 E-value=7.1 Score=34.11 Aligned_cols=191 Identities=12% Similarity=-0.012 Sum_probs=103.0
Q ss_pred CcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccccc--------cccCCC-CCceEEEEeCCCcEEEEcCCC
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY--------HMRDDS-KQLHLLSCSMDKSIIVWAPDP 118 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--------~~~~~~-~~~~l~~~~~d~~i~i~d~~~ 118 (312)
..+..++|.+. ++.++++-...+.|+.++++......+. -++... .+.++++-+..+.|.+.++..
T Consensus 349 ~~~~~ld~d~~-----~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPV-----EGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETT-----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcC-----CCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 45778899875 2455556556788888887754331111 111121 233444445566777777664
Q ss_pred CcceeeeeeeecccCCCccceeEEEECCCCCeEEEeec--CCeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEE
Q psy15191 119 TTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF--QGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV 195 (312)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (312)
.....+. ...-....++++.|....|+.+.. ...|.. ++.--.........-...+.|++++++..|+.+
T Consensus 424 ~~~~~l~-------~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 424 TMRKILI-------SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp CSCEEEE-------CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CeEEEEE-------ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEE
Confidence 3221111 122345789999997555554432 345544 333222211122234567889999877666666
Q ss_pred e-cCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 196 S-RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 196 ~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
. ..+.|..+++.............. | ..+++...+ .++.+-...+.|...|..++
T Consensus 497 D~~~~~I~~~~~dG~~~~~~~~~~l~----~---P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 497 DAKTDKIEVMNTDGTGRRVLVEDKIP----H---IFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp ETTTTEEEEEESSSCCCEEEEECCCC----S---SCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred ECCCCEEEEEecCCCceEEEeccCCC----C---cEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 4 457899999876554433332111 2 234555433 44444445566777776665
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.67 E-value=9 Score=34.31 Aligned_cols=112 Identities=13% Similarity=0.088 Sum_probs=64.6
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEEecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.|.++...+++..|..|+..|..+++..+.+...........|.++...++|.+.+ |+. +-+.+++..+.........
T Consensus 192 ~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~ 269 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHD 269 (758)
T ss_dssp CEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCC
T ss_pred eeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcC
Confidence 47788877777766666665655556655443322111234688888888887554 454 4588888765443222111
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 253 (312)
...........|.++....+|.+.+.. ..| +.++
T Consensus 270 ~~~~~~l~~~~i~~i~~D~~g~lWiGT-~~G-l~~~ 303 (758)
T 3ott_A 270 SRNIQSLTNNIIWNIFADQEHNIWLGT-DYG-ISLS 303 (758)
T ss_dssp TTCTTSCSCSCEEEEEECTTCCEEEEE-SSS-EEEE
T ss_pred CCCcCcCCcCeEEEEEEcCCCCEEEEe-CCc-cccc
Confidence 111111134568899888888766644 456 5444
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.64 E-value=13 Score=36.08 Aligned_cols=189 Identities=10% Similarity=0.098 Sum_probs=100.7
Q ss_pred CceEEEecCCCcEEEeeecCCcccc-------cccccC-CCCCceEEEEeCCCcEEEEcCCCCcceeeeeeee-cccCCC
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGNYL-------PYHMRD-DSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARV-GEVGGN 135 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~~~-------~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~ 135 (312)
.+.+|.=+ ..+++|+|+++...+. +.+-.| ++. .|+-. .+..|.-|++.... .....+.. ..+ .
T Consensus 77 ~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~--~l~lV-T~~aVyHW~~~~~s-~P~k~fdR~~~L--~ 149 (1630)
T 1xi4_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALV-TDNAVYHWSMEGES-QPVKMFDRHSSL--A 149 (1630)
T ss_pred cceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCC--eeEEE-cCCeEEEeccCCCC-ccHHHHhcchhc--c
Confidence 56665544 6789999998876632 222222 333 22222 24569999996421 11111111 111 1
Q ss_pred ccceeEEEECCCCCeEEEeec-------CCeEEEecccCceeeeecccCCceeEEEECC--C-CCEEEEEec---CCeEE
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGF-------QGSLHLDVTTWKQIQTLPCHQLTITQLAFSP--D-DTHLVSVSR---DRRWG 202 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~-------~~~i~~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---d~~i~ 202 (312)
...|..-..+++.++++..+- .|.+.+-....+..+.+.+|......+.... . ...++.+.. .+.++
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 456777788899999775442 3555551111223333446666555444431 2 223333322 26888
Q ss_pred EEEccCC-CeEEEEec-cCCCCc---ccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCC
Q psy15191 203 LYKRQSS-GRLSLVAC-SDKTNG---VHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPT 260 (312)
Q Consensus 203 ~wd~~~~-~~~~~~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 260 (312)
|-++... .....+.. .....+ .......++..++.-..+..-+.-|.|++||+.++..
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh
Confidence 8888543 10000000 000000 0233455677788778888888999999999999853
No 344
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.61 E-value=7.3 Score=31.60 Aligned_cols=190 Identities=7% Similarity=0.021 Sum_probs=101.1
Q ss_pred EEEEEeCCCC--ceEEEEccc------cCcEEEEEEe-cCcC-cCCCCceEEEecCCCcEEEeeecCCcccccccccCCC
Q psy15191 28 MAVKWNGEGG--KVLYTLTNH------KSKVMAVKWV-LNTS-LDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS 97 (312)
Q Consensus 28 ~~~~w~~~~~--~~~~~~~~h------~~~v~~~~~~-~~~~-~~~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~~ 97 (312)
.-+.||..+. ++++++.-. ..-+..+++. .... -..++...++=+...-|.|+|+.+++...+....+.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4466898888 888877532 2346777776 1100 0011223344445677888998888876655433333
Q ss_pred CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCC----CCeEEEeecCC-eE-EE---ecccCc
Q psy15191 98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPR----GDYIIAHGFQG-SL-HL---DVTTWK 168 (312)
Q Consensus 98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~-~i-~~---d~~~~~ 168 (312)
+....+ .-+|.-..| ...+..++++|+ ++.|+-..-.+ .+ .+ .+++..
T Consensus 204 d~~~~~--~i~G~~~~~---------------------~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~ 260 (381)
T 3q6k_A 204 ERPTKF--DYGGKEYEF---------------------KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG 260 (381)
T ss_dssp CSCEEE--EETTEEEEE---------------------CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT
T ss_pred ccCcce--EECCEEeEe---------------------ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc
Confidence 311111 111211111 234788999997 77777665444 22 23 222222
Q ss_pred eeeeec--ccC---CceeEEEEC-CCCCEEEEEecCCeEEEEEccC-C---CeEEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 169 QIQTLP--CHQ---LTITQLAFS-PDDTHLVSVSRDRRWGLYKRQS-S---GRLSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 169 ~~~~~~--~~~---~~v~~~~~~-~~~~~l~~~~~d~~i~~wd~~~-~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
....++ +.. ..-..+++. .+|..+++--....|..|+..+ . +....+.... .-..+..+.+.++|
T Consensus 261 ~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-----~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 261 GKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-----RFVFGTDISVDSKG 335 (381)
T ss_dssp CCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-----TCCSEEEEEECTTS
T ss_pred hhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-----CccccCeEEECCCC
Confidence 222111 222 334456775 6788788777889999999875 1 1223322211 11235667777777
Q ss_pred ceEEEec
Q psy15191 239 RYFLTIS 245 (312)
Q Consensus 239 ~~l~s~~ 245 (312)
.+.+..+
T Consensus 336 ~Lwv~sn 342 (381)
T 3q6k_A 336 GLWFMSN 342 (381)
T ss_dssp CEEEEEC
T ss_pred eEEEEEC
Confidence 6555543
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.38 E-value=7.6 Score=31.50 Aligned_cols=115 Identities=7% Similarity=-0.043 Sum_probs=58.6
Q ss_pred ccceeEEEECC-CCCeEEEeecCC----eEEE--e-cccCceeeee---cc--------cCCceeEEEECC-C-CCEEEE
Q psy15191 136 TLGFYGCKFGP-RGDYIIAHGFQG----SLHL--D-VTTWKQIQTL---PC--------HQLTITQLAFSP-D-DTHLVS 194 (312)
Q Consensus 136 ~~~v~~~~~~~-~~~~l~~~~~~~----~i~~--d-~~~~~~~~~~---~~--------~~~~v~~~~~~~-~-~~~l~~ 194 (312)
...+.++++.| +...+.+++..| .|.. | -.+|+..... .. ....|.++++.| + ...+..
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 34689999998 344455555555 4444 3 4567665421 11 113577899987 2 456666
Q ss_pred EecCCeEEEEEccCCCeEEEEeccCC-CC-----------cccceeeEEEEEcCC-CceEEEeccCCeEE
Q psy15191 195 VSRDRRWGLYKRQSSGRLSLVACSDK-TN-----------GVHKRIIWGVAWSHD-SRYFLTISRDGVCV 251 (312)
Q Consensus 195 ~~~d~~i~~wd~~~~~~~~~~~~~~~-~~-----------~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~ 251 (312)
++..+.|...+ ..++....+..... .. ......+.++.++|. ...|..+..++.|.
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~ 202 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVF 202 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEE
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEE
Confidence 66666554432 12233333221100 00 002345788999883 34444454444443
No 346
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.70 E-value=9.9 Score=30.80 Aligned_cols=102 Identities=12% Similarity=0.107 Sum_probs=52.0
Q ss_pred CeEEEeecCCeEEE--ec--ccCceeeeecccCCceeEEEECC-CCCEEEEEecCC----eEEEEEccCCCeEEEEeccC
Q psy15191 149 DYIIAHGFQGSLHL--DV--TTWKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDR----RWGLYKRQSSGRLSLVACSD 219 (312)
Q Consensus 149 ~~l~~~~~~~~i~~--d~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~ 219 (312)
..|.++...|.+++ +. .+|....... ....|.+|+++| +...|..++..| .|... ...++....+....
T Consensus 23 g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~-~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKGAWFLASDPARRTWELRGPVF-LGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTEEEEEEECTTSCSEEEEEEES-TTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCceEEEECCCCCCCceECCccC-CCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 45777777776655 23 4676653222 345799999998 334455555554 34332 22233333332110
Q ss_pred CCCcc-------cceeeEEEEEcCC--CceEEEeccCCeEEE
Q psy15191 220 KTNGV-------HKRIIWGVAWSHD--SRYFLTISRDGVCVV 252 (312)
Q Consensus 220 ~~~~~-------~~~~v~~~~~~~~--~~~l~s~~~dg~i~i 252 (312)
..... ....|.++++.|. ...|..+...+.|..
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~ 142 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFR 142 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEE
Confidence 00000 1135778999872 455655655665443
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.21 E-value=2.6 Score=33.60 Aligned_cols=113 Identities=8% Similarity=-0.015 Sum_probs=62.9
Q ss_pred ceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEE--CC-CCCeEEEe-ecCCeEEE-ecccCceeeeec
Q psy15191 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF--GP-RGDYIIAH-GFQGSLHL-DVTTWKQIQTLP 174 (312)
Q Consensus 100 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~~~l~~~-~~~~~i~~-d~~~~~~~~~~~ 174 (312)
..++.++.||.|.-+|..+++..+..... . ..++....- .+ ++..++.. +.||.+.. +..++.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--N----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--G----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--c----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence 47899999999999999997776655432 0 001111000 01 22223332 46777766 554442222221
Q ss_pred ----ccCCceeE---EEE-C----CCCCEEEEEecCCeEEEEEccCCCeEEEEecc
Q psy15191 175 ----CHQLTITQ---LAF-S----PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218 (312)
Q Consensus 175 ----~~~~~v~~---~~~-~----~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 218 (312)
....++.. ... . ..+..+++++.+|.+...|+++++.+..+...
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 11112211 000 0 13557889999999999999998888777643
No 348
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=85.89 E-value=12 Score=29.83 Aligned_cols=203 Identities=17% Similarity=0.194 Sum_probs=109.3
Q ss_pred EeCCCCceEEEEccccCcEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcc-c------------ccccccCCCC
Q psy15191 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGN-Y------------LPYHMRDDSK 98 (312)
Q Consensus 32 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~-~------------~~~~~~~~~~ 98 (312)
||.++.+.+..+.-. ..|.-=.|... +.|+-.. +..|.-|+++.... . .+.-...+++
T Consensus 92 FnletK~klks~~~~-e~VvfWkWis~-------~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 162 (365)
T 2xzh_A 92 FNIEMKSKMKAHTMT-DDVTFWKWISL-------NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 162 (365)
T ss_dssp EETTTTEEEEEEECS-SCEEEEEECSS-------SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred echHHhhhhcceecC-CccEEEEecCC-------CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCC
Confidence 888888777777653 56777778665 3444443 45799999875322 1 1111111333
Q ss_pred CceEEEEe-------CCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEEC--CCCC-eEEEeec---CCeEEE-ec
Q psy15191 99 QLHLLSCS-------MDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFG--PRGD-YIIAHGF---QGSLHL-DV 164 (312)
Q Consensus 99 ~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~~---~~~i~~-d~ 164 (312)
...++..+ -.|.+.+|..+....+.+ .+|......+.+. +... .++.+.. .+.+++ ++
T Consensus 163 ~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i--------eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi 234 (365)
T 2xzh_A 163 QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 234 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE--------CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeEeccCCccceeEEEEeeccccccee--------eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEc
Confidence 33332222 236777888776432222 2444333222221 1111 2222222 256777 44
Q ss_pred ccC---cee--ee-----ec--ccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEE
Q psy15191 165 TTW---KQI--QT-----LP--CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGV 232 (312)
Q Consensus 165 ~~~---~~~--~~-----~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 232 (312)
..- ... +. +. ...+-.-+|..++.-..++.-+.-|.|++||+.++..+..-+.. ...|..-
T Consensus 235 ~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS-------~d~iF~t 307 (365)
T 2xzh_A 235 GTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-------GETIFVT 307 (365)
T ss_dssp SSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEE
T ss_pred CCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC-------CCceEEe
Confidence 221 110 00 00 12334456777777778888899999999999999988877653 3334444
Q ss_pred EEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 233 AWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 233 ~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
+-+....-++.....|.|.--.+...
T Consensus 308 a~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 308 APHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred cccCCCCcEEEEcCCCEEEEEEECcc
Confidence 44444344555557776666555543
No 349
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=84.49 E-value=23 Score=32.01 Aligned_cols=154 Identities=12% Similarity=0.130 Sum_probs=78.9
Q ss_pred ccceeEEEECCC-CCeEEEeecCCeEEE---ecccCceeeeecc----cCCceeEEEECCC-CCEEEEEecCCe----EE
Q psy15191 136 TLGFYGCKFGPR-GDYIIAHGFQGSLHL---DVTTWKQIQTLPC----HQLTITQLAFSPD-DTHLVSVSRDRR----WG 202 (312)
Q Consensus 136 ~~~v~~~~~~~~-~~~l~~~~~~~~i~~---d~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~d~~----i~ 202 (312)
...|.+++++|. ...++++...+.|.. .-++|+.+..... ....+..|+++|. .+.++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 457999999995 456677776666655 3457876543211 2346999999984 344444432211 33
Q ss_pred EEEc-cCCCeEEEEeccCCCC--cccceeeEEEEEcCC-CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEee-
Q psy15191 203 LYKR-QSSGRLSLVACSDKTN--GVHKRIIWGVAWSHD-SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY- 277 (312)
Q Consensus 203 ~wd~-~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~- 277 (312)
||.. ..++....+....... ......+..++++|. ...++.+...+. ||....+ .+.|+.+..+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~Dg--------G~TW~~~~~~~~ 163 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDR--------AKTWTNVTSIPD 163 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESST--------TSSCEEETTSCC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCC--------CcccCCCccCcc
Confidence 4433 3344444443221100 001112456777774 345555553333 4544444 44555443221
Q ss_pred --ccCcceeEEEeccC-CCeEEEEe
Q psy15191 278 --GHGYEIYSLAASHD-GTLLASAC 299 (312)
Q Consensus 278 --~~~~~v~~~~~s~~-~~~l~s~s 299 (312)
.....+..+.++|. +..|..+.
T Consensus 164 ~~~~~~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 164 AFTNGIGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp CCSTTTCEEEEEECTTSTTCEEEEE
T ss_pred ccCCCCCeEEEEECCCCCCEEEEEE
Confidence 11245778888874 34454443
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=83.62 E-value=6.5 Score=34.05 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=40.7
Q ss_pred eeEEEECCCCCEEEEEecC------------CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191 180 ITQLAFSPDDTHLVSVSRD------------RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI 244 (312)
Q Consensus 180 v~~~~~~~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 244 (312)
.-.|+|+|.|++++.-..+ ..+.+.+..+++....+..+ ....++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P------~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC------TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC------CCccCcCeeECCCCCEEEEE
Confidence 4678999999866553221 23555666666666666654 55679999999999887654
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.08 E-value=25 Score=31.41 Aligned_cols=222 Identities=9% Similarity=-0.036 Sum_probs=110.0
Q ss_pred EEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCccc--------ccccccCCCCCceEEEEeCCCcEEEEcCCCCcc
Q psy15191 50 VMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNY--------LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG 121 (312)
Q Consensus 50 v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 121 (312)
|.++...++ +..|..|.. +-+..+|..+++.. .+..+....++ .|..|+.+ -+.+++..+.+.
T Consensus 193 i~~i~~d~~------~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigT~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 193 VNSLLEDTT------RQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG-DLLAGTDN-GLYVYHNDTTPL 263 (758)
T ss_dssp EEEEEEETT------TTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC-CEEEEETT-EEEEECCTTSCC
T ss_pred eEEEEEECC------CCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC-CEEEEeCC-ceeEEecCCCcE
Confidence 677766554 554444443 34777776655321 11222223344 34445544 477888765332
Q ss_pred eeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEEec-ccCceeeee----cccCCceeEEEECCCCCEEEEEe
Q psy15191 122 LWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDV-TTWKQIQTL----PCHQLTITQLAFSPDDTHLVSVS 196 (312)
Q Consensus 122 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~-~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~ 196 (312)
............-....|.++....+|. |..|+..|...+.. ...+..... ......|.++.-.++|.+.+ |+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt 341 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYGISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GG 341 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCcccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-ee
Confidence 2111100000011234588888887776 44555567433311 111111100 01234688888888887544 45
Q ss_pred cCCeEEEEEccCCC--eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeE
Q psy15191 197 RDRRWGLYKRQSSG--RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQ 274 (312)
Q Consensus 197 ~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 274 (312)
.+| +..++..+.. ....+.............|.++.-.++|++.+.. ++-|..||..++. ..
T Consensus 342 ~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt--~~GL~~~~~~~~~-------------~~ 405 (758)
T 3ott_A 342 ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT--DGSINRYDYATRQ-------------FI 405 (758)
T ss_dssp TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTE-------------EE
T ss_pred CCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe--CCcHhhcCcCCCc-------------EE
Confidence 554 6666654321 2222221111111123458888888888866643 3468889876541 11
Q ss_pred Eee--c-----cCcceeEEEeccCCCeEEEE
Q psy15191 275 KLY--G-----HGYEIYSLAASHDGTLLASA 298 (312)
Q Consensus 275 ~~~--~-----~~~~v~~~~~s~~~~~l~s~ 298 (312)
.+. . ....|.++.-.++|.+.+..
T Consensus 406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT 436 (758)
T 3ott_A 406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWIST 436 (758)
T ss_dssp EEEEECCC--CBSSSEEEEEECTTSEEEEEE
T ss_pred EeecCCCcCCCCCceEEEEEEcCCCCEEEEE
Confidence 111 0 23457788877777766543
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.00 E-value=20 Score=30.05 Aligned_cols=30 Identities=3% Similarity=-0.133 Sum_probs=22.0
Q ss_pred CcEEEEEEecCcCcCCCCc-eEEEecCCCcEEEeeec
Q psy15191 48 SKVMAVKWVLNTSLDPEHK-DLVSCSLDKTAILWKYV 83 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~-~l~s~~~dg~i~vw~~~ 83 (312)
...+.|+|.|+ +. .|+.+...|.|++++..
T Consensus 14 ~~P~~~a~~pd------G~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGD------GSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSS------SSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCC------CCeEEEEEeCCceEEEEeCC
Confidence 46788999998 64 35555678999999753
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.11 E-value=40 Score=32.97 Aligned_cols=158 Identities=13% Similarity=0.017 Sum_probs=85.3
Q ss_pred CcEEEEEEecCcCcCCCCceEEEec-------CCCcEEEeeecCCccc-----cccc----ccCCCCCceEEE-EeC---
Q psy15191 48 SKVMAVKWVLNTSLDPEHKDLVSCS-------LDKTAILWKYVSEGNY-----LPYH----MRDDSKQLHLLS-CSM--- 107 (312)
Q Consensus 48 ~~v~~~~~~~~~~~~~~~~~l~s~~-------~dg~i~vw~~~~~~~~-----~~~~----~~~~~~~~~l~~-~~~--- 107 (312)
..|..-+.+++ .++++..| ..|.+++|..+.+... ...| .+..+....+++ +..
T Consensus 151 ~QIinY~~d~~------~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 151 CQIINYRTDAK------QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred CeeEEeeeCCC------CCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34444444444 77766433 4588999998876541 1111 111222222333 222
Q ss_pred CCcEEEEcCCCC-cceeeeeee---ec-ccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeeecccCCcee
Q psy15191 108 DKSIIVWAPDPT-TGLWLETAR---VG-EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTIT 181 (312)
Q Consensus 108 d~~i~i~d~~~~-~~~~~~~~~---~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~~~~~~~v~ 181 (312)
.+.++|.++... .+......+ +. +......-..++..++.-..+..-+.-|.+++ |+.|...+..-+-....|.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF 304 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceE
Confidence 378999988653 111111101 00 00112333456778888788888899999999 8888776655444445555
Q ss_pred EEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 182 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
..+-++...-++.....|.|.--.+.....
T Consensus 305 ~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred EeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 554444434455555666666555554433
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.05 E-value=12 Score=32.26 Aligned_cols=60 Identities=8% Similarity=0.067 Sum_probs=40.3
Q ss_pred ceeEEEECCCCCEEEEEec------------CCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEe
Q psy15191 179 TITQLAFSPDDTHLVSVSR------------DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTI 244 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 244 (312)
....|.|+++|.+.+.... ...+..++..+++....+..+ ....++.++|+||++.|+.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P------~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC------TTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC------CCccccCCEECCCCCEEEEE
Confidence 4568999999987763221 125666666656655554432 34568999999999988765
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.95 E-value=18 Score=28.20 Aligned_cols=99 Identities=10% Similarity=0.059 Sum_probs=52.4
Q ss_pred EECCCCCeEEEeecC--------------CeEEE-ecccCceeeeecccCCceeEEEECCCCCEEEEEe--cC--CeEEE
Q psy15191 143 KFGPRGDYIIAHGFQ--------------GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS--RD--RRWGL 203 (312)
Q Consensus 143 ~~~~~~~~l~~~~~~--------------~~i~~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d--~~i~~ 203 (312)
-+++++.+|+-+... ..|+. ++...+.. .+. ... ...|++++++|+-.. .+ ..|+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLD--PDP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEE--CSC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eee--cCC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 456788887766543 23444 44433322 121 111 236777888888765 33 44555
Q ss_pred EEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEecc-CCeEEEEecCCC
Q psy15191 204 YKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR-DGVCVVWGLGEP 258 (312)
Q Consensus 204 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~ 258 (312)
-++.......... +. + .+++|+++.|+-.+. ...|.+-++...
T Consensus 134 ~~~dGs~~~~lt~--------~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 134 IRIDGEEKKKIKN--------HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EETTSCCCEEEES--------SC--C--CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred EECCCCCeEEEeC--------CC--c--eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 5665433333222 11 1 346777877775554 456777766544
No 356
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=75.85 E-value=56 Score=31.13 Aligned_cols=113 Identities=15% Similarity=0.082 Sum_probs=66.7
Q ss_pred cceeEEEECCCCCeEEEeecCCeEEE-ecccCceeeee-cccCCceeEEEECCC------CCEEEEEec-CCeEEEEEcc
Q psy15191 137 LGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTL-PCHQLTITQLAFSPD------DTHLVSVSR-DRRWGLYKRQ 207 (312)
Q Consensus 137 ~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~~~~-~~~~~~v~~~~~~~~------~~~l~~~~~-d~~i~~wd~~ 207 (312)
..|...+.+. .+++.+. ++.+.+ .+...++.... ..-...|.++++.|. +++++.|.. |++++|+++.
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 3465555543 3555554 555555 44333222111 124567999999863 468999986 9999999998
Q ss_pred CCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecC
Q psy15191 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
+.+.+......... ....+.-+.+ ....+|..|-.||.+.-+.+.
T Consensus 591 ~l~~~~~~~L~~~~---~p~si~l~~~-~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 591 SFELLHKEMLGGEI---IPRSILMTTF-ESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TCCEEEEEECCSSC---CEEEEEEEEE-TTEEEEEEEETTSEEEEEEEC
T ss_pred CCCeEEEEECCCCC---CCcEEEEEEe-CCCcEEEEEeCCCeEEEEEEc
Confidence 76665444322110 1222333333 244688889999988766654
No 357
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=75.62 E-value=34 Score=28.52 Aligned_cols=174 Identities=13% Similarity=0.047 Sum_probs=101.0
Q ss_pred EeCCC-CceEEEEcccc----CcEEEEEEecCcCcCCCCceEEEec-------CCCcEEEeeecCCccc-----cccc--
Q psy15191 32 WNGEG-GKVLYTLTNHK----SKVMAVKWVLNTSLDPEHKDLVSCS-------LDKTAILWKYVSEGNY-----LPYH-- 92 (312)
Q Consensus 32 w~~~~-~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~l~s~~-------~dg~i~vw~~~~~~~~-----~~~~-- 92 (312)
|+.++ ..+...|.-|. ..|..-+.+++ .++++..+ ..|.+++|..+.+... ...|
T Consensus 130 Wsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~------~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 130 WSMEGESQPVKMFDRHSSLAGCQIINYRTDAK------QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ 203 (494)
T ss_dssp EESSSSCCCEEEEECCGGGTTCEEEEEEECTT------SSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEE
T ss_pred ecccCCCCchhheecchhcccceEEEEEECCC------CCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEE
Confidence 66643 34555665543 33444444444 78876443 3578999998876541 1111
Q ss_pred --ccCCCC-CceEEEEeC---CCcEEEEcCCCC-cceeee---eeeec-ccCCCccceeEEEECCCCCeEEEeecCCeEE
Q psy15191 93 --MRDDSK-QLHLLSCSM---DKSIIVWAPDPT-TGLWLE---TARVG-EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLH 161 (312)
Q Consensus 93 --~~~~~~-~~~l~~~~~---d~~i~i~d~~~~-~~~~~~---~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 161 (312)
.+..+. ...+..+.. .+.+++.++... .+.... ...+. .......-..++..++.-..++.-+.-|.++
T Consensus 204 ~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~ 283 (494)
T 1bpo_A 204 FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (494)
T ss_dssp EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEE
Confidence 111222 223333333 278999998653 111111 11111 1112234456788888888899999999999
Q ss_pred E-ecccCceeeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe
Q psy15191 162 L-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR 211 (312)
Q Consensus 162 ~-d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 211 (312)
+ |+.+...+..-+-....|...+.+....-++.....|.|.--.+.....
T Consensus 284 lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 284 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 9 9998888776665566666666555555666667777776666665443
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.16 E-value=21 Score=33.94 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=31.5
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.+.+++..++..++++-+.|+++|+|++.+++.+.....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 344556667888999999999999999999888776554
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.92 E-value=57 Score=30.29 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=27.9
Q ss_pred eeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.+.+++..++..++++-+.|+++|+|++.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 46677888888999999999999999998874
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.76 E-value=27 Score=31.07 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=29.9
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEEEec
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVAC 217 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 217 (312)
.|.++.+ +..++++-+.|.++|+|++.+.+.+.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 477999999999999999999887777666
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=71.34 E-value=28 Score=29.99 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=39.2
Q ss_pred eeeEEEEEcCCCceEEEecc------------CCeEEEEecCCCCCCcccccccccceeEE-eecc-CcceeEEEeccCC
Q psy15191 227 RIIWGVAWSHDSRYFLTISR------------DGVCVVWGLGEPPTEEDLVQNTLWPEVQK-LYGH-GYEIYSLAASHDG 292 (312)
Q Consensus 227 ~~v~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~v~~~~~s~~~ 292 (312)
.....|+|.++|.+.+.... .+.|..++..++ .+.. +.+. ...++.++|+||+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-------------el~~fl~~P~~aEpnGiafSPD~ 542 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-------------EIRRFMVGPIGCEVTGISFSPDQ 542 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC-------------CEEEEEECCTTCEEEEEEECTTS
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC-------------eEEEEEeCCCCccccCCEECCCC
Confidence 45678999999988774321 114555554443 2222 2222 3578999999999
Q ss_pred CeEEEEec
Q psy15191 293 TLLASACK 300 (312)
Q Consensus 293 ~~l~s~s~ 300 (312)
+.|..+-.
T Consensus 543 ktLfV~vQ 550 (592)
T 4a9v_A 543 KTLFVGIQ 550 (592)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEe
Confidence 98888754
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=70.34 E-value=38 Score=26.75 Aligned_cols=111 Identities=10% Similarity=0.094 Sum_probs=67.7
Q ss_pred CCCeEEEeecCCeEEE-ecccCceee-------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEcc--CCCeEEE-E
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQIQ-------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQ--SSGRLSL-V 215 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~--~~~~~~~-~ 215 (312)
+..+++..+.+|.++. .+..+.... .+.. .+.+..+........++..+..|.+..+... .-..... .
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 5788999999999988 555544322 1222 3445555554555678888899998888776 3111000 0
Q ss_pred eccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
.+...........|.++...+++.+|+..+..|.++.-.+..-
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 229 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY 229 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence 0000001113445666666666778999999999988876543
No 363
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=69.61 E-value=43 Score=27.06 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=41.2
Q ss_pred ceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE-------EEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEE
Q psy15191 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-------SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCV 251 (312)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 251 (312)
.+..++++.-....+.-..||.|+.|-.....++ ...+.... ......|..++.. ....+.-..||.|+
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~--~l~~~~i~~va~G--~~hs~alt~~G~v~ 181 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIEVVDVAAG--GAHSACVTAAGDLY 181 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG--GGTTSCEEEEEEC--SSEEEEEETTSCEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEec--ccCCCeEEEEEeC--cCeEEEEeCCCeEE
Confidence 3455666666677777788999999965432111 00000000 0022245566553 34455556789999
Q ss_pred EEecC
Q psy15191 252 VWGLG 256 (312)
Q Consensus 252 iwd~~ 256 (312)
.|-..
T Consensus 182 ~wG~n 186 (389)
T 3kci_A 182 TWGKG 186 (389)
T ss_dssp EEECC
T ss_pred EeCCC
Confidence 99654
No 364
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=68.15 E-value=41 Score=26.25 Aligned_cols=110 Identities=10% Similarity=0.100 Sum_probs=64.5
Q ss_pred CCCeEEEeecCCeEEE-ecccCceee-------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE-Eec
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQIQ-------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL-VAC 217 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~ 217 (312)
++.+++..+.+|.++- .+..+.... .+... +.+-.+....+...++..+.+|.+..++...-..... ..+
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~G 186 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG 186 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCC
Confidence 5667889999999988 554443321 12223 4555555444555677888899988888754221100 000
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCC
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 257 (312)
...........|.++...+++..++..+..|.++-.++..
T Consensus 187 v~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 187 VRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp EECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred eEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 0000111334566665555566788889999998887744
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.66 E-value=27 Score=30.32 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=37.4
Q ss_pred eeEEEEEcCCCceEEEeccC------------CeEEEEecCCCCCCcccccccccceeEEeec-cCcceeEEEeccCCCe
Q psy15191 228 IIWGVAWSHDSRYFLTISRD------------GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYG-HGYEIYSLAASHDGTL 294 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 294 (312)
..-.|+|+|.|.+++.-..+ +.+.+.+...+. ...-+.+ -...++.++|+||++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~------------~~rf~~~P~gaE~TG~~fspDg~t 544 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE------------IRRFMVGPIGCEVTGISFSPDQKT 544 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC------------EEEEEECCTTCEEEEEEECTTSSE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe------------EEEEEeCCCCccCcCeeECCCCCE
Confidence 34578999999977754322 234444433331 2222233 3468999999999998
Q ss_pred EEEEe
Q psy15191 295 LASAC 299 (312)
Q Consensus 295 l~s~s 299 (312)
|...-
T Consensus 545 lfvni 549 (592)
T 3zwu_A 545 LFVGI 549 (592)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.18 E-value=14 Score=35.03 Aligned_cols=23 Identities=22% Similarity=0.089 Sum_probs=13.2
Q ss_pred CceEEEecCCCcEEEeeecCCcc
Q psy15191 65 HKDLVSCSLDKTAILWKYVSEGN 87 (312)
Q Consensus 65 ~~~l~s~~~dg~i~vw~~~~~~~ 87 (312)
..++++-+.|+++|+|++.++.+
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTEE
T ss_pred ccEEEEEeCCCEEEEEECCCCCe
Confidence 44555556666666666555544
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=62.97 E-value=49 Score=25.32 Aligned_cols=157 Identities=10% Similarity=-0.025 Sum_probs=81.7
Q ss_pred ceeEEEECCCCCeEEEeecCCeEEE----eccc--CceeeeecccCCceeEEEECC-CCCEEEEEecCCeEEEEEccCCC
Q psy15191 138 GFYGCKFGPRGDYIIAHGFQGSLHL----DVTT--WKQIQTLPCHQLTITQLAFSP-DDTHLVSVSRDRRWGLYKRQSSG 210 (312)
Q Consensus 138 ~v~~~~~~~~~~~l~~~~~~~~i~~----d~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 210 (312)
.+..+........|+..+..|.++. ++.. +.-. +. ....|..+.... +..+++..+.+|.++-..+....
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 3444444444556666777777766 2221 1111 22 345566664421 46789999999999999876543
Q ss_pred eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcceeEEEecc
Q psy15191 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH 290 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 290 (312)
.. -.+...........+..+........++..+..|.+..++...-+...... + ......+.. ...|.++...+
T Consensus 102 -~~-~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a--~-Gv~~i~L~~-~d~vv~~~~~~ 175 (276)
T 3no0_A 102 -YK-AQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGA--R-GVQGIKLEK-NDETSGLRIWN 175 (276)
T ss_dssp -TC-STTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTC--C-CEECCCCCT-TCCEEEEEEES
T ss_pred -hh-cCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCC--C-CEEEEccCC-CCEEEEEEEeC
Confidence 10 001000011133445555555566678888899988888765432211000 0 001122322 34555555445
Q ss_pred CCCeEEEEecCCC
Q psy15191 291 DGTLLASACKATK 303 (312)
Q Consensus 291 ~~~~l~s~s~d~~ 303 (312)
++..|+..+..|.
T Consensus 176 ~~~~ll~~T~~G~ 188 (276)
T 3no0_A 176 GEPYLLVITAKGR 188 (276)
T ss_dssp SCSEEEEEETTSC
T ss_pred CCCEEEEEeCCCc
Confidence 5667777755443
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=61.08 E-value=59 Score=25.65 Aligned_cols=153 Identities=8% Similarity=0.001 Sum_probs=81.4
Q ss_pred CCceEEEEeCCCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE-ecc--cCceee---
Q psy15191 98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVT--TWKQIQ--- 171 (312)
Q Consensus 98 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-d~~--~~~~~~--- 171 (312)
+...++..+.+|.++.-.+..-............+.. ...+..+........++..+..|.+.. ... .-....
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 4568999999999998776542111101111112222 233444444444556777777777655 333 111110
Q ss_pred ------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCe-------EEEEeccCCCCcccceeeEEEEEcCCC
Q psy15191 172 ------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGR-------LSLVACSDKTNGVHKRIIWGVAWSHDS 238 (312)
Q Consensus 172 ------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (312)
.+ .....|..+...+++.+++..+..|.++.-.+..... ...+.... ....+..+....+.
T Consensus 187 ~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~-----~~d~lv~~~~~~~~ 260 (327)
T 3uc1_A 187 SGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDR-----RRGRLVGALIVDDD 260 (327)
T ss_dssp BCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCT-----TTCSEEEEEEECTT
T ss_pred CCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecC-----CCCeEEEEEEeCCC
Confidence 11 2345577766666667889999999998887654322 11111100 12234444443344
Q ss_pred ceEEEeccCCeEEEEecCC
Q psy15191 239 RYFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 239 ~~l~s~~~dg~i~iwd~~~ 257 (312)
..++..+.+|.+.-++...
T Consensus 261 ~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 261 SELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEEEEEEGGGCEEEEEGGG
T ss_pred ccEEEEcCCCeEEEEehhh
Confidence 5566667777777776644
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=57.12 E-value=68 Score=25.06 Aligned_cols=111 Identities=12% Similarity=0.154 Sum_probs=65.4
Q ss_pred CCCeEEEeecCCeEEE-ecccCceee-------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE-Eec
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQIQ-------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL-VAC 217 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~ 217 (312)
+..+++..+..|.++. .+..+...+ .+. ..+.+-.+....+...++..+.+|.+..+....-..... -.+
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~-~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN-DKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-TTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 4667888899999888 554443221 122 245565555555556788889999999998765211100 000
Q ss_pred cCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
...........|.++..-+++..+++.+..|..+..++..-
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred eEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 00000112344556555555667888899999998887544
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=55.78 E-value=71 Score=24.93 Aligned_cols=158 Identities=13% Similarity=0.063 Sum_probs=76.7
Q ss_pred eeEEEECCCCCeEEEeecCCeEEE-ecccCcee------------eeecccCCceeEEEECC---CCCEEEEEecCCeEE
Q psy15191 139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQI------------QTLPCHQLTITQLAFSP---DDTHLVSVSRDRRWG 202 (312)
Q Consensus 139 v~~~~~~~~~~~l~~~~~~~~i~~-d~~~~~~~------------~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~ 202 (312)
+..+........++..+..|.++. ........ -.+. ....|..+..-+ +..+++..+.+|.++
T Consensus 49 l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 49 IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 333333344556666777777655 22211110 0111 223444443322 456788889999999
Q ss_pred EEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCcc
Q psy15191 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYE 282 (312)
Q Consensus 203 ~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (312)
.-.+....... -.+...........+..+....+...++..+.+|.+..+....-....... .......+.. ...
T Consensus 128 r~~l~~~~~~r-~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~---~Gv~~i~L~~-~d~ 202 (312)
T 1suu_A 128 RFESTDFKAVK-SRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGT---QGVCGMKLKE-GDL 202 (312)
T ss_dssp EEEGGGGCC-----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTB---CCEECCCCCT-TCC
T ss_pred EEEHHHhhccC-CCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCC---CCeEeEEeCC-CCE
Confidence 88876532221 000000011123445555555555678888999999888876521111000 0012222322 344
Q ss_pred eeEEEeccCCCeEEEEecCC
Q psy15191 283 IYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 283 v~~~~~s~~~~~l~s~s~d~ 302 (312)
|.++..-.++..|++.+..|
T Consensus 203 vv~~~~v~~~~~l~~vt~~G 222 (312)
T 1suu_A 203 FVKVLSVKENPYLLIVSENG 222 (312)
T ss_dssp EEEEEECTTCSEEEEEETTS
T ss_pred EEEEEEECCCCeEEEEECCC
Confidence 55555444555666664433
No 371
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.43 E-value=1.3e+02 Score=27.10 Aligned_cols=60 Identities=13% Similarity=0.269 Sum_probs=36.5
Q ss_pred eeEEEECCC-CCeEEEeecCCeEEE--e-cccCceeeeec---ccCCceeEEEECC-CCCEEEEEecC
Q psy15191 139 FYGCKFGPR-GDYIIAHGFQGSLHL--D-VTTWKQIQTLP---CHQLTITQLAFSP-DDTHLVSVSRD 198 (312)
Q Consensus 139 v~~~~~~~~-~~~l~~~~~~~~i~~--d-~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d 198 (312)
+..++++|. ...++++...+.|.. | -++|+...... .....+..+.++| ++..++.+..+
T Consensus 123 ~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 123 GERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred eeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 556888874 455666664555555 4 46788765432 1124578899988 44566666554
No 372
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.17 E-value=1.2e+02 Score=27.07 Aligned_cols=30 Identities=17% Similarity=0.423 Sum_probs=24.2
Q ss_pred eeEEEEEcCCCceEEEeccCCeEEEEecCCCC
Q psy15191 228 IIWGVAWSHDSRYFLTISRDGVCVVWGLGEPP 259 (312)
Q Consensus 228 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 259 (312)
.|.++.+ +..++++-+.|.++|+|++.++.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 4555544 47899999999999999998875
No 373
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.88 E-value=1.4e+02 Score=26.64 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=60.7
Q ss_pred ceeEEEECCCC-CeEEEeecCCeEEE---ecccCceeeeecc----cCCceeEEEECC-CCCEEEEEecC-------CeE
Q psy15191 138 GFYGCKFGPRG-DYIIAHGFQGSLHL---DVTTWKQIQTLPC----HQLTITQLAFSP-DDTHLVSVSRD-------RRW 201 (312)
Q Consensus 138 ~v~~~~~~~~~-~~l~~~~~~~~i~~---d~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~d-------~~i 201 (312)
.|..++++|.. ..++++...+.+.. .-++|+.+..... ....|.+|+++| +.+.++.+... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 78999999963 55666665555555 2456776543211 124589999998 43444444321 124
Q ss_pred EEEEccC-CCeEEEEeccCCCC--cccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCC
Q psy15191 202 GLYKRQS-SGRLSLVACSDKTN--GVHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 202 ~~wd~~~-~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~ 258 (312)
.||.... ++....+....... ......+..++++|.. ..|+.+...| --||.-..+
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g-~gl~~S~Dg 163 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG-NGLWRSTDY 163 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT-CCEEEESST
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC-CcEEEeCCC
Confidence 4555443 34433333221100 0001123568888853 4555555332 124544443
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.81 E-value=1.1e+02 Score=24.87 Aligned_cols=177 Identities=10% Similarity=0.104 Sum_probs=90.4
Q ss_pred cEEEEcCCCCcceeeeeeeec-ccCCCccceeEEEEC---CC----CCeEEEee-cCCeEEE-ecccCceeeeec-----
Q psy15191 110 SIIVWAPDPTTGLWLETARVG-EVGGNTLGFYGCKFG---PR----GDYIIAHG-FQGSLHL-DVTTWKQIQTLP----- 174 (312)
Q Consensus 110 ~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~---~~----~~~l~~~~-~~~~i~~-d~~~~~~~~~~~----- 174 (312)
+|.+||+.+.....+.+.... ........+..+++. |. +.+++.+. ....+.+ |+.+.+..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 577788887511233333321 112234567788877 22 23444433 2334444 766543332221
Q ss_pred ---------c----cCCceeEEEECCC----CCEEEEEecCC-eEEEEE---ccCCC---eEEEEeccCCCCcccceeeE
Q psy15191 175 ---------C----HQLTITQLAFSPD----DTHLVSVSRDR-RWGLYK---RQSSG---RLSLVACSDKTNGVHKRIIW 230 (312)
Q Consensus 175 ---------~----~~~~v~~~~~~~~----~~~l~~~~~d~-~i~~wd---~~~~~---~~~~~~~~~~~~~~~~~~v~ 230 (312)
+ -...+..|+++|+ ++.|+-....+ .++--. ++... .+..+... . ....-.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~k-g----~~s~~~ 278 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNR-G----KYNDAI 278 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEEC-C----TTCCEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeec-C----CCCCcc
Confidence 1 0246888999997 67776665544 233222 11111 11111110 0 112234
Q ss_pred EEEEc-CCCceEEEeccCCeEEEEecCC-CCCCcccccccccceeEEeec--cCcceeEEEeccCCCeEEEEec
Q psy15191 231 GVAWS-HDSRYFLTISRDGVCVVWGLGE-PPTEEDLVQNTLWPEVQKLYG--HGYEIYSLAASHDGTLLASACK 300 (312)
Q Consensus 231 ~~~~~-~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~s~ 300 (312)
.+++. .+|.++++--..+.|..|+... .-... .+..+.. .-..+.++++.++|.+.+..+.
T Consensus 279 ~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~---------n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMK---------NTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGG---------GEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccC---------ceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 56775 6788888888889999999865 21111 1222221 1234678888888887777643
No 375
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.83 E-value=98 Score=23.62 Aligned_cols=174 Identities=15% Similarity=0.100 Sum_probs=84.5
Q ss_pred cEEEEEEecCcCcCCCCceEEEecCCCcEEEeeecCCcccc--------cccccCCCCCceEEEEeCCCcEEEEcCCCCc
Q psy15191 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL--------PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTT 120 (312)
Q Consensus 49 ~v~~~~~~~~~~~~~~~~~l~s~~~dg~i~vw~~~~~~~~~--------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 120 (312)
.|..++--.. ..++. . ||.|..|-......+. +........ ..+.-. ||.|..|-.....
T Consensus 25 ~i~~ia~G~~-------h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYF-------HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSS-------EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTS
T ss_pred CCcEEEeCCC-------eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCC
Confidence 5666665332 23333 4 8899988755433221 111111111 222224 8888888655422
Q ss_pred ceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCceeeeecccCCceeEEEECCCCCEEEEEecC
Q psy15191 121 GLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD 198 (312)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 198 (312)
..-+ +. .-...|..++..... .++-. +|.+.. .....++-... .....|..++...+- .+.-. |
T Consensus 93 qlg~---P~----~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~--~~~l~-~ 158 (282)
T 3qhy_B 93 QTTV---PA----EARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYT--ALAVK-N 158 (282)
T ss_dssp TTCC---CG----GGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE--EEEEE-T
T ss_pred CCCC---Cc----ccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCE--EEEEE-C
Confidence 1111 10 012346666654332 33334 777777 22222221111 123457777664332 23333 7
Q ss_pred CeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 199 RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
|.++.|-.....++.. +. .....|..++...+. .++. .||.|+.|-....
T Consensus 159 G~v~~wG~n~~gqlg~-p~------~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 159 GGVIAWGDNYFGQTTV-PA------EAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp TEEEEEECCTTSTTSC-CG------GGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTT
T ss_pred CEEEEecCCCCCCCCC-ce------ecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCC
Confidence 9999998765443311 00 023457777765433 3333 5999999976544
No 376
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=44.45 E-value=1e+02 Score=23.49 Aligned_cols=127 Identities=9% Similarity=0.098 Sum_probs=64.3
Q ss_pred CCcEEEEcCCCCcceeeeeeeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCceeeeecccCCceeEEEE
Q psy15191 108 DKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQIQTLPCHQLTITQLAF 185 (312)
Q Consensus 108 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~~~~~~~~~~~v~~~~~ 185 (312)
||.|..|-.......-+ +. .....|..++...... ++. . +|.+.. +....++-... .-...|..++.
T Consensus 41 ~G~v~~wG~n~~Gqlg~---p~----~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~-~~~~~v~~ia~ 109 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTM---PA----ATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPA-EARSGVDAIAA 109 (282)
T ss_dssp TTEEEEEECCSSSTTSC---CG----GGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCG-GGSSSEEEEEE
T ss_pred CCEEEEEeCCCCCCCCC---Cc----cCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCc-ccCCCeEEEEC
Confidence 89999886554221111 10 1123466666554332 222 3 787776 22222221111 12346777776
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 186 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
..+ ..+.-. ||.|+.|-.....++.. . ......|..++...+.. ++. . ||.|+.|-....
T Consensus 110 G~~--hs~al~-~G~v~~wG~n~~gqlg~-~------~~~~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 110 GAW--ASYALK-DGKVIAWGDDSDGQTTV-P------AEAQSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYF 169 (282)
T ss_dssp ETT--EEEEEE-TTEEEEEECCTTSTTSC-C------GGGGSSEEEEEECSSEE-EEE-E-TTEEEEEECCTT
T ss_pred cCC--EEEEEe-CCeEEEecCCCCCcCCC-C------ccCCCCeEEEEcccCEE-EEE-E-CCEEEEecCCCC
Confidence 543 334445 99999998765443311 0 00334576776654332 222 3 799999976543
No 377
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=41.16 E-value=2e+02 Score=25.85 Aligned_cols=154 Identities=15% Similarity=0.100 Sum_probs=76.5
Q ss_pred CccceeEEEECCCC-CeEEEeecCCeEEE---ecccCceeee-ec----c----cCCceeEEEECC-CCCEEEEEecC--
Q psy15191 135 NTLGFYGCKFGPRG-DYIIAHGFQGSLHL---DVTTWKQIQT-LP----C----HQLTITQLAFSP-DDTHLVSVSRD-- 198 (312)
Q Consensus 135 ~~~~v~~~~~~~~~-~~l~~~~~~~~i~~---d~~~~~~~~~-~~----~----~~~~v~~~~~~~-~~~~l~~~~~d-- 198 (312)
....|.+++++|.. ..++++...|.|.. .-++|+.+.. .. + ....+..|+++| +.+.++.+...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 45689999999965 56666665565555 3456776554 20 1 224589999998 33444443321
Q ss_pred ---CeEEEEEcc-CCCeEEEEeccCCCCc--ccceeeEEEEEcCCC-ceEEEeccCCeEEEEecCCCCCCcccccccccc
Q psy15191 199 ---RRWGLYKRQ-SSGRLSLVACSDKTNG--VHKRIIWGVAWSHDS-RYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWP 271 (312)
Q Consensus 199 ---~~i~~wd~~-~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 271 (312)
....||... .++....+..+..... ........++++|.. ..+..+...+ .||.-..+ .+.|+
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~--~l~~S~Dg--------G~TW~ 168 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQ--GLWRSTDR--------AQTWS 168 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSS--CEEEESST--------TSSCE
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCC--cEEEECCC--------CcCcc
Confidence 123444433 3444444432211000 001111357787753 4444455443 24444444 34455
Q ss_pred eeEEeec---cCcceeEEEeccCC-CeEEEE
Q psy15191 272 EVQKLYG---HGYEIYSLAASHDG-TLLASA 298 (312)
Q Consensus 272 ~~~~~~~---~~~~v~~~~~s~~~-~~l~s~ 298 (312)
.+..+.. ....+..|+++|.. ..+..+
T Consensus 169 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 199 (763)
T 3a0f_A 169 RMNQLPDSSTYGIGIISVIFDPKNVGTAYVA 199 (763)
T ss_dssp ECTTSCCCSCTTTCEEEEEECSSSTTCEEEE
T ss_pred ccccCcccCCCccceEEEEECCCCCCEEEEE
Confidence 4442221 11346778888753 334444
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=38.03 E-value=1.4e+02 Score=23.18 Aligned_cols=121 Identities=13% Similarity=0.049 Sum_probs=59.7
Q ss_pred CCceeEEEEC---CCCCEEEEEecCCeEEEEEccCCCeEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEEE
Q psy15191 177 QLTITQLAFS---PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253 (312)
Q Consensus 177 ~~~v~~~~~~---~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 253 (312)
...|..+..- .++.+++..+.+|.++--.+........ .+...........+..+........++..+.+|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r-~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 94 DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT-AGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRF 172 (307)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT-TCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc-CCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEE
Confidence 3445555432 3456788899999999887753222110 00000000022444455444455567778888888888
Q ss_pred ecCCCCCCcccccccccceeEEeeccCcceeEEEeccCCCeEEEEecCC
Q psy15191 254 GLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302 (312)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~s~d~ 302 (312)
+...-......... .....+. ....|.++...+++..|++.+..|
T Consensus 173 ~~~~v~~~gr~a~G---v~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G 217 (307)
T 1zi0_A 173 KESSVRAMGCNTTG---VRGIRLG-EGDKVVSLIVPRGDGAILTATQNG 217 (307)
T ss_dssp EGGGSCBCCTTCCC---EECCCCC-TTCCEEEEECCCSSCEEEEEETTS
T ss_pred EHHHcCccCCCCCC---eEeEEeC-CCCEEEEEEEecCCCEEEEEEcCC
Confidence 76543211110000 0111222 234566665545555677774433
No 379
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=36.76 E-value=1.4e+02 Score=22.77 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=66.5
Q ss_pred CCCeEEEeecCCeEEE-ecccCce------eeeecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE-Eecc
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQ------IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL-VACS 218 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~ 218 (312)
+...++..+.+|.++. ....+.. ...+. ..+.+..+........++..+..|.+..+....-..... -.+.
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 4678889999999888 5555430 01111 234566665555666788889999988887654221100 0000
Q ss_pred CCCCcccceeeEEEEEcCCCceEEEeccCCeEEEEecCCC
Q psy15191 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEP 258 (312)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 258 (312)
..........|.++...+++.+++..+..|.++...+..-
T Consensus 158 ~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~ 197 (276)
T 3no0_A 158 QGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEI 197 (276)
T ss_dssp ECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGS
T ss_pred EEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHc
Confidence 0001113345666655556778888999999988877543
No 380
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=36.60 E-value=1.5e+02 Score=23.21 Aligned_cols=109 Identities=11% Similarity=0.108 Sum_probs=63.1
Q ss_pred CCeEEEeecCCeEEE-ecccCceee--------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeEEE-Eec
Q psy15191 148 GDYIIAHGFQGSLHL-DVTTWKQIQ--------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL-VAC 217 (312)
Q Consensus 148 ~~~l~~~~~~~~i~~-d~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~ 217 (312)
+.+++.++.+|.++. .+..+.... .+. ..+.+-.+........++..+.+|.+..+....-..... ..+
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~-e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G 184 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG 184 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC
Confidence 567889999999998 554443322 122 224555555545556788888999998888764221110 000
Q ss_pred cCCCCcccceeeEEEEEcCCCc-eEEEeccCCeEEEEecCC
Q psy15191 218 SDKTNGVHKRIIWGVAWSHDSR-YFLTISRDGVCVVWGLGE 257 (312)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~ 257 (312)
...........|.++..-+++. .|+..+..|..+..++..
T Consensus 185 V~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 185 VKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 0000011334455554434444 788888899888887765
No 381
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.87 E-value=1.9e+02 Score=24.50 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=24.3
Q ss_pred ccceeEEEECCCCCeEEEeecCCeEEE
Q psy15191 136 TLGFYGCKFGPRGDYIIAHGFQGSLHL 162 (312)
Q Consensus 136 ~~~v~~~~~~~~~~~l~~~~~~~~i~~ 162 (312)
..+|..|.++++...|++++.++.+++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467899999999999999999998888
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=30.69 E-value=1.3e+02 Score=25.41 Aligned_cols=28 Identities=18% Similarity=0.155 Sum_probs=23.1
Q ss_pred cceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191 225 HKRIIWGVAWSHDSRYFLTISRDGVCVV 252 (312)
Q Consensus 225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~i 252 (312)
...+|..+.++++..+|..++.++.++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 3467899999999999999998886554
No 383
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=29.24 E-value=2.2e+02 Score=22.81 Aligned_cols=150 Identities=13% Similarity=0.165 Sum_probs=72.0
Q ss_pred eEEEEeCCCcEEEEcCCCCcc------eeeee-eeecccCCCccceeEEEECCCCCeEEEeecCCeEEE--ecccCce--
Q psy15191 101 HLLSCSMDKSIIVWAPDPTTG------LWLET-ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL--DVTTWKQ-- 169 (312)
Q Consensus 101 ~l~~~~~d~~i~i~d~~~~~~------~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--d~~~~~~-- 169 (312)
..+.-..||.|..|-....-. ..... ..+..+ ....+..++.+.-..+.++-..+|.|.. .....++
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~--~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGG--TTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccc--cCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 455667889999995432100 00111 111111 1122344555555555556666777666 1111111
Q ss_pred --------eeeecc-cCCceeEEEECCCCCEEEEEecCCeEEEEEccCCCeE-------EEEeccCCCCcccceeeEEEE
Q psy15191 170 --------IQTLPC-HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-------SLVACSDKTNGVHKRIIWGVA 233 (312)
Q Consensus 170 --------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~~~~~~v~~~~ 233 (312)
...+.. ....|..++.. ....+....+|.|+.|-.....++ ...+.. ........|..++
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~--v~~~~~~~v~~ia 217 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKL--VEALQGHRVVDIA 217 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEE--CGGGTTSCEEEEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceE--ecccCCCeEEEEE
Confidence 011111 12246666653 345566678999999975432110 000000 0000233466666
Q ss_pred EcCCCceEEEeccCCeEEEEecC
Q psy15191 234 WSHDSRYFLTISRDGVCVVWGLG 256 (312)
Q Consensus 234 ~~~~~~~l~s~~~dg~i~iwd~~ 256 (312)
........+.-..||.|+.|-..
T Consensus 218 ~G~g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 218 CGSGDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp ECCSSCEEEEEETTTEEEEEECC
T ss_pred EcCCCcEEEEEccCCEEEEEeCC
Confidence 65433555666789999999654
No 384
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.10 E-value=1.3e+02 Score=26.52 Aligned_cols=28 Identities=18% Similarity=0.155 Sum_probs=23.2
Q ss_pred cceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191 225 HKRIIWGVAWSHDSRYFLTISRDGVCVV 252 (312)
Q Consensus 225 ~~~~v~~~~~~~~~~~l~s~~~dg~i~i 252 (312)
...+|..+.++++.++|+.++.++.++|
T Consensus 468 ~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4567889999999999999998886554
No 385
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=28.66 E-value=2.5e+02 Score=24.87 Aligned_cols=29 Identities=7% Similarity=0.099 Sum_probs=25.8
Q ss_pred CCccceeEEEECCCCCeEEEeecCCeEEE
Q psy15191 134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHL 162 (312)
Q Consensus 134 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 162 (312)
....+|..|.++++...|++++.++.+++
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 34567889999999999999999999998
No 386
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.10 E-value=1.7e+02 Score=25.11 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=39.9
Q ss_pred eEEEEEcCC--CceEEEeccCCeEEEEecCCCCCCcccccccccceeEEeeccCccee-EEEeccCCCeEEEEecCCCcc
Q psy15191 229 IWGVAWSHD--SRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY-SLAASHDGTLLASACKATKPE 305 (312)
Q Consensus 229 v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~s~d~~~~ 305 (312)
.++++.... ...+..|..+|.|.-..+....... ...+.+ .+.....+|. .|.+++++.+|..+ ++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~-----~~~e~~-~v~~~~~pv~~~l~~~~~~~~Lyv~-----s~ 470 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGG-----VQYEMV-SVFKDGSPILRDMAFSINQLYLYVM-----SE 470 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEE-----EEEEEE-ECCTTCCCCCSCCEECTTSSEEEEE-----CS
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccc-----eeEEEE-EeecCCCccccceEEccCCCeEEEE-----ec
Confidence 444544432 3356778889977655443321100 011111 1222356785 89999999999998 44
Q ss_pred cceEEe
Q psy15191 306 HAAIII 311 (312)
Q Consensus 306 dg~i~i 311 (312)
++.++|
T Consensus 471 ~~V~kv 476 (539)
T 3al9_A 471 RQVTRV 476 (539)
T ss_dssp SEEEEE
T ss_pred ccccee
Confidence 444554
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=26.60 E-value=2.5e+02 Score=22.56 Aligned_cols=61 Identities=8% Similarity=0.172 Sum_probs=39.2
Q ss_pred CCCeEEEeecCCeEEE-ecccCceee-------eecccCCceeEEEECCCCCEEEEEecCCeEEEEEccC
Q psy15191 147 RGDYIIAHGFQGSLHL-DVTTWKQIQ-------TLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208 (312)
Q Consensus 147 ~~~~l~~~~~~~~i~~-d~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 208 (312)
++.+++.++..|.++. .+..+.... .+. -.+.+-.+........++..+.+|.+..++...
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~-~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD-EGDALVGVALTDGDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC-TTCCEEEEEEECSCCEEEEEETTSEEEEEEGGG
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC-CCCEEEEEEEeCCCceEEEEeCCCeEEEEEccc
Confidence 4568999999999988 554443321 122 234454555444555777888899888887654
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.22 E-value=2e+02 Score=24.67 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=40.0
Q ss_pred eeEEEECC--CCCEEEEEecCCeEEEEEccCCCe----EEEEeccCCCCcccceeeE-EEEEcCCCceEEEeccCCeEEE
Q psy15191 180 ITQLAFSP--DDTHLVSVSRDRRWGLYKRQSSGR----LSLVACSDKTNGVHKRIIW-GVAWSHDSRYFLTISRDGVCVV 252 (312)
Q Consensus 180 v~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~dg~i~i 252 (312)
+++|+... +-..++.|+.+|.|.-..+..... +..+... ....+|. .+.+++++.+|+.++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~-----~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVF-----KDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECC-----TTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEee-----cCCCccccceEEccCCCeEEEEecccccee
Confidence 44455443 233566788899875554543221 1111111 1245674 7899999999999888775554
No 389
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=23.93 E-value=3.8e+02 Score=23.71 Aligned_cols=58 Identities=9% Similarity=-0.049 Sum_probs=34.8
Q ss_pred EEEEEecCCeEEEE-EccCCCeEEEEeccCCCCcccceeeEEEEEcCCC--ceEEEeccCCeEEE
Q psy15191 191 HLVSVSRDRRWGLY-KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDS--RYFLTISRDGVCVV 252 (312)
Q Consensus 191 ~l~~~~~d~~i~~w-d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~i 252 (312)
.++.|+.+|.|.-. .... ........ .......+|..+.++++. .+|+.++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~-~~~~~ee~---~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEH-AVHIIEET---QLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSS-SEEEEEEE---ECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCC-CceEEEEe---cccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 57778888886433 3332 21111111 011145678889999988 88988888875554
No 390
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.45 E-value=3.6e+02 Score=23.45 Aligned_cols=30 Identities=0% Similarity=-0.061 Sum_probs=25.3
Q ss_pred CccceeEEEECCCCCeEEEeecCCeEEEec
Q psy15191 135 NTLGFYGCKFGPRGDYIIAHGFQGSLHLDV 164 (312)
Q Consensus 135 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~d~ 164 (312)
...+|..+.++++...|++++.++.+++.+
T Consensus 417 ~~~pi~~L~ls~~~~~LyV~s~~~V~qVPl 446 (590)
T 3nvq_A 417 RAAAIQTMSLDAERRKLYVSSQWEVSQVPL 446 (590)
T ss_dssp SCCCCCEEEEETTTTEEEEECSSEEEEEET
T ss_pred CCCceeeEEEcCCCCEEEEEecceEEEcch
Confidence 446789999999999999999999988833
No 391
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=22.87 E-value=3.8e+02 Score=23.32 Aligned_cols=59 Identities=10% Similarity=-0.014 Sum_probs=34.6
Q ss_pred EEEEEecCCeEEEEEccCCC----eEEEEeccCCCCcccceeeEEEEEcCCCceEEEeccCCeEEE
Q psy15191 191 HLVSVSRDRRWGLYKRQSSG----RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVV 252 (312)
Q Consensus 191 ~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 252 (312)
.+..|+.+|.|.-.-..... ........ ......+|..+.++++...|+.++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~---~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQ---PFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEEC---CCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEee---ccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 56678888887533332211 11111110 0113457889999999999988888775555
No 392
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.54 E-value=4.1e+02 Score=23.67 Aligned_cols=55 Identities=13% Similarity=0.116 Sum_probs=33.6
Q ss_pred cCCeEEEEEccCC-------CeEEE-EeccCCCCcccceeeEEEEEcCCCceEEEeccCC--eEEEEecCCC
Q psy15191 197 RDRRWGLYKRQSS-------GRLSL-VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDG--VCVVWGLGEP 258 (312)
Q Consensus 197 ~d~~i~~wd~~~~-------~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~ 258 (312)
..+.|...|+.+. ..... +... ....+..+.|..+ .++++...++ .|.++++..+
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPT------ANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCC------TTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETT
T ss_pred CCCeEEEEECCcccccccccccceEEECCC------CCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCC
Confidence 3567888888753 12222 2221 4456788899865 5677777777 4666776544
Done!