RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15191
(312 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 78.2 bits (191), Expect = 5e-17
Identities = 43/305 (14%), Positives = 77/305 (25%), Gaps = 39/305 (12%)
Query: 15 KVLYTLTNHKSKVMAVKWNGEG-------------------GKVLYTLTNHKSKVMAVKW 55
+ TL H +K+ A+ W + ++ + S VM +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 56 VLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWA 115
+ + CS + + +
Sbjct: 106 APSGNYVACGGLDNICS--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLP 174
+ G+T P ++ S L DV QT
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 175 CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAW 234
H+ I + F P+ + S D L+ ++ ++ I V++
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-----LMTYSHDNIICGITSVSF 278
Query: 235 SHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL 294
S R L D C VW + L GH + L + DG
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALK------------ADRAGVLAGHDNRVSCLGVTDDGMA 326
Query: 295 LASAC 299
+A+
Sbjct: 327 VATGS 331
Score = 60.5 bits (145), Expect = 5e-11
Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 17/166 (10%)
Query: 91 YHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDY 150
+ +S + D S +W D G+ +T G+ F P G+
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLW--DVREGMCRQTFT-----GHESDINAICFFPNGNA 240
Query: 151 IIAHGFQGSLHLDVTTWKQIQTLPCHQL---TITQLAFSPDDTHLVSVSRDRRWGLYKRQ 207
+ L Q H IT ++FS L++ D ++
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 208 SSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
+ R H + + + D T S D +W
Sbjct: 301 KADRA-------GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 58.6 bits (140), Expect = 2e-10
Identities = 24/170 (14%), Positives = 46/170 (27%), Gaps = 46/170 (27%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
W+ G T T H+S + A+ + P + S D T L+ ++ + Y
Sbjct: 211 WDVREGMCRQTFTGHESDINAICF------FPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 92 HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
+ G F G +
Sbjct: 265 SHDNIIC---------------------------------------GITSVSFSKSGRLL 285
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRR 200
+A + ++ D + L H ++ L + D + + S D
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Score = 41.6 bits (96), Expect = 7e-05
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 149 DYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208
D ++ + + +TL H I + + D LVS S+D + ++ +
Sbjct: 27 DATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT 86
Query: 209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
+ ++ + + A++ Y D +C ++
Sbjct: 87 TNKV-------HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 72.1 bits (175), Expect = 5e-15
Identities = 47/318 (14%), Positives = 94/318 (29%), Gaps = 56/318 (17%)
Query: 18 YTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTNHKSKVMAVKW--V 56
Y L+ H+S V V W+ E G TL H V + +
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 57 LNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAP 116
+ + + + ++ + H++S S DK+I +W
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 117 DPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPC 175
+ G+ + G I + ++ + V T + L
Sbjct: 131 QTGYCVK-------TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183
Query: 176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGV----------- 224
H+ + ++++P+ ++ S+S K G L DKT +
Sbjct: 184 HRHVVECISWAPESSYS-SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242
Query: 225 ---HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY 281
H + GV + ++ L+ + D VW ++ L H +
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN------------KRCMKTLNAHEH 290
Query: 282 EIYSLAASHDGTLLASAC 299
+ SL + +
Sbjct: 291 FVTSLDFHKTAPYVVTGS 308
Score = 66.3 bits (160), Expect = 5e-13
Identities = 44/279 (15%), Positives = 92/279 (32%), Gaps = 42/279 (15%)
Query: 10 NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTS--------- 60
+ E G TL H V + ++ G + + K+ +
Sbjct: 45 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 104
Query: 61 ----LDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH--------LLSCSMD 108
+ P +VS S DKT +W+ + + + ++ + SCS D
Sbjct: 105 SSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 164
Query: 109 KSIIVWA-------------PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155
+++ VW + G K G G ++++
Sbjct: 165 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 224
Query: 156 FQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSL 214
++ + DV+T + TL H + + F ++S + D+ ++ ++ +
Sbjct: 225 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM-- 282
Query: 215 VACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
KT H+ + + + + Y +T S D VW
Sbjct: 283 -----KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 63.6 bits (153), Expect = 4e-12
Identities = 41/270 (15%), Positives = 84/270 (31%), Gaps = 23/270 (8%)
Query: 41 YTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDS-KQ 99
Y L+ H+S V V + P +VS S D T +W Y + DS +
Sbjct: 11 YALSGHRSPVTRVIF------HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 100 LHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159
+ + + + + G+ P GD+I++ +
Sbjct: 65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124
Query: 160 LHLD-VTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACS 218
+ + V T ++T H+ + + + D T + S S D+ ++ +
Sbjct: 125 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------EC 177
Query: 219 DKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE--------DLVQNTLW 270
H+ ++ ++W+ +S Y G P + +
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237
Query: 271 PEVQKLYGHGYEIYSLAASHDGTLLASACK 300
+ L GH + + G + S
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCAD 267
Score = 61.7 bits (148), Expect = 2e-11
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 9/192 (4%)
Query: 15 KVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLD 74
+ T T H+ V V+ N +G + + +V V + EH+ +V C
Sbjct: 134 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193
Query: 75 KTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG 134
+ +SE LLS S DK+I +W D +TG+ L T G
Sbjct: 194 APESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMW--DVSTGMCLMTLV-----G 245
Query: 135 NTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLV 193
+ G F G +I++ +L + D + ++TL H+ +T L F ++V
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 305
Query: 194 SVSRDRRWGLYK 205
+ S D+ +++
Sbjct: 306 TGSVDQTVKVWE 317
Score = 36.3 bits (82), Expect = 0.003
Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 47/167 (28%)
Query: 168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVH- 225
+ L H+ +T++ F P + +VS S D ++ ++ +L +D +
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 67
Query: 226 ---------------------------------KRIIWGVAWSHDSRYFLTISRDGVCVV 252
+ V+ + + ++ SRD +
Sbjct: 68 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 127
Query: 253 WGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
W + V+ GH + + + DGTL+AS
Sbjct: 128 WEVQT------------GYCVKTFTGHREWVRMVRPNQDGTLIASCS 162
Score = 32.4 bits (72), Expect = 0.066
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 271 PEVQKLYGHGYEIYSLAASHDGTLLASACK 300
PE L GH + + +++ SA +
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASE 37
Score = 25.9 bits (55), Expect = 7.9
Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 29/74 (39%)
Query: 8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67
V + + + + TL H+ V ++ ++
Sbjct: 273 VWDYKNKRCMKTLNAHEHFVTSLDFH-----------------------------KTAPY 303
Query: 68 LVSCSLDKTAILWK 81
+V+ S+D+T +W+
Sbjct: 304 VVTGSVDQTVKVWE 317
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 58.7 bits (140), Expect = 2e-10
Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 10/284 (3%)
Query: 17 LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76
L+ +H S V VK++ +G + L T N ++V V + SL D + + D
Sbjct: 55 LHKSLDHTSVVCCVKFSNDG-EYLATGCNKTTQVY---RVSDGSLVARLSDDSAANKDPE 110
Query: 77 AILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNT 136
+ + + L + + D+ I +W + + +
Sbjct: 111 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH------EQ 164
Query: 137 LGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
+ F + G + D+ T + TL T D ++ + S
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 224
Query: 197 RDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLG 256
DR ++ ++ + + +++ HK ++ V ++ D + ++ S D +W L
Sbjct: 225 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
Query: 257 EPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACK 300
+ D GH + S+A + + + S K
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 328
Score = 56.3 bits (134), Expect = 1e-09
Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 16/188 (8%)
Query: 80 WKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF 139
+S + + ++ + S+D+++ VW + + + G+
Sbjct: 198 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257
Query: 140 YGCKFGPRGDYIIAHGFQGSLHL-------------DVTTWKQIQTLPCHQLTITQLAFS 186
Y F G +++ S+ L + T H+ + +A +
Sbjct: 258 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317
Query: 187 PDDTHLVSVSRDRRWGLYKRQSSGRL-SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTIS 245
+D +++S S+DR + ++S L L + V + G + + F T S
Sbjct: 318 QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA--VANGSSLGPEYNVFATGS 375
Query: 246 RDGVCVVW 253
D +W
Sbjct: 376 GDCKARIW 383
Score = 46.7 bits (109), Expect = 2e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY 82
W+ + G L L H++ V++V +SL PE+ + S D A +WKY
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 45.6 bits (106), Expect = 4e-06
Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 27/178 (15%)
Query: 55 WVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH------------- 101
+ K + + SLD+ +W + ++S H
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 266
Query: 102 --LLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFY-----GCKFGPRGDYIIAH 154
++S S+D+S+ +W T + +YI++
Sbjct: 267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 326
Query: 155 GFQGSLHL-DVTTWKQIQTLPCHQLTITQLA------FSPDDTHLVSVSRDRRWGLYK 205
+ D + + L H+ ++ +A P+ + S D + ++K
Sbjct: 327 SKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 27.8 bits (60), Expect = 1.7
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 19 TLTNHKSKVMAVKWNGEGGKVL-------------------------YTLTNHKSKVMAV 53
+ T HK V +V + +G V+ + T + +
Sbjct: 249 SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 308
Query: 54 KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE--------------GNYLPYHMRDDSKQ 99
+VL+ + + ++S S D+ + W S + +
Sbjct: 309 DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY 368
Query: 100 LHLLSCSMDKSIIVW 114
+ S D +W
Sbjct: 369 NVFATGSGDCKARIW 383
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 54.8 bits (130), Expect = 3e-09
Identities = 25/252 (9%), Positives = 58/252 (23%), Gaps = 23/252 (9%)
Query: 17 LYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKT 76
N + + + K +G ++ + + +C
Sbjct: 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149
Query: 77 AILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR-------- 128
+ K D L+ + D +
Sbjct: 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209
Query: 129 -------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTIT 181
+ T + + P G+++ ++ + L H+ +
Sbjct: 210 WDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL 269
Query: 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF 241
L F+ VS +D ++ + + S D +Y
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--------ESSSVLSCDISVDDKYI 321
Query: 242 LTISRDGVCVVW 253
+T S D V+
Sbjct: 322 VTGSGDKKATVY 333
Score = 48.3 bits (113), Expect = 5e-07
Identities = 31/290 (10%), Positives = 72/290 (24%), Gaps = 31/290 (10%)
Query: 14 GKVLYTLTNHKSKVMAVKWNGEGGKV-LYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCS 72
+ +YT KV + G V N + + + K P+ L+
Sbjct: 63 TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL------LPDGCTLIVGG 116
Query: 73 LDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEV 132
T +W + + + + + L+ S D + + V
Sbjct: 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176
Query: 133 GGNTLGFYGCK---FGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDD 189
G G + G ++ + I L + P
Sbjct: 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG 236
Query: 190 THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV 249
L + + +H+ + + +++ ++F++ +D +
Sbjct: 237 EWLAVGMESSNVEVLH--------VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 250 CVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
W T + + S S D + +
Sbjct: 289 LNAW-------------RTPYGASIFQSKESSSVLSCDISVDDKYIVTGS 325
Score = 43.3 bits (100), Expect = 2e-05
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 139 FYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSR 197
KF G + ++ G L+ I ++ S DD ++V+ S
Sbjct: 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSG 326
Query: 198 DRRWGLYK 205
D++ +Y+
Sbjct: 327 DKKATVYE 334
Score = 38.6 bits (88), Expect = 6e-04
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 8/88 (9%)
Query: 225 HKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIY 284
H ++ V S+ +R+ T G VW + P + + Q I
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLD-------CLNRDNYIR 101
Query: 285 SLAASHDGTLLASACKATKPEHAAIIIW 312
S DG L +A+ +
Sbjct: 102 SCKLLPDGCTLIVGGEASTLSIWDLAAP 129
Score = 30.5 bits (67), Expect = 0.21
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV 83
W G ++ S V++ + K +V+ S DK A +++ +
Sbjct: 292 WRTPYGASIFQS-KESSSVLSCDI------SVDDKYIVTGSGDKKATVYEVI 336
Score = 28.2 bits (61), Expect = 1.4
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 12/75 (16%)
Query: 240 YFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLY--GHGYEIYSLAASHDGTLLAS 297
Y ++ DG L+ + +++ HG + ++ S+ + +
Sbjct: 13 YSFHVTADGQMQPVPFPPDA----LIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYT 68
Query: 298 ACKATKPEHAAIIIW 312
K + +W
Sbjct: 69 GGKGC------VKVW 77
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 52.2 bits (123), Expect = 3e-08
Identities = 26/222 (11%), Positives = 53/222 (23%), Gaps = 19/222 (8%)
Query: 51 MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKS 110
+A + L + D + N Y D+ +L S
Sbjct: 142 IAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL 201
Query: 111 IIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS--------LHL 162
+ ++ + K PR A + + +++
Sbjct: 202 DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV 261
Query: 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTN 222
D ++ I L L + + G L +
Sbjct: 262 DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK-----------GVLLKYDVKTRKV 310
Query: 223 GVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
K + + S D + + DG + L +P E +
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 44.5 bits (103), Expect = 9e-06
Identities = 25/297 (8%), Positives = 55/297 (18%), Gaps = 30/297 (10%)
Query: 14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73
KV + + + + ++ GK + V A+ N D
Sbjct: 54 TKVAFIHGTREGDFLGI-YDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMT 111
Query: 74 DKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW----LETARV 129
V E + +E ++
Sbjct: 112 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 171
Query: 130 GEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWK-------QIQTLPCHQLTIT 181
Y F + ++ D + +P +
Sbjct: 172 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 231
Query: 182 QLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYF 241
P + D + I + Y+
Sbjct: 232 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYY 291
Query: 242 LTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASA 298
GV + + + + +K+ + L S D +
Sbjct: 292 QGAPEKGVLLKYDV----------------KTRKVTEVKNNLTDLRLSADRKTVMVR 332
Score = 30.2 bits (66), Expect = 0.29
Identities = 12/109 (11%), Positives = 31/109 (28%), Gaps = 22/109 (20%)
Query: 184 AFSPDD-THLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242
FSP D + VSR + + + + L + I V D++
Sbjct: 9 DFSPLDGDLIAFVSRGQAF-IQDVSGTYVLKVP---------EPLRIRYVRRGGDTKVAF 58
Query: 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHD 291
+ + + + +K + ++++ +
Sbjct: 59 IHGTREGDFLG-----------IYDYRTGKAEKFEENLGNVFAMGVDRN 96
Score = 29.1 bits (63), Expect = 0.70
Identities = 11/111 (9%), Positives = 30/111 (27%), Gaps = 9/111 (8%)
Query: 144 FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWG 202
F P +IA +G + DV+ ++ L I + D
Sbjct: 10 FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP--EPLRIRYVRRGGDTKVAFIHGTREGDF 67
Query: 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
L + + + ++ + + ++ + + +
Sbjct: 68 LGIYDYRTGKA------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 112
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 50.7 bits (120), Expect = 9e-08
Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 3/141 (2%)
Query: 162 LDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221
+D + K ++ + + S +L+ + RD R + + + VA
Sbjct: 47 VDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMID-LWAKEPTKVAEIKIG 104
Query: 222 NGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGY 281
+ + ++ RY + + GE + +V + Y
Sbjct: 105 IE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 163
Query: 282 EIYSLAASHDGTLLASACKAT 302
+ ++ ASH+ K T
Sbjct: 164 RVAAIIASHEHPEFIVNVKET 184
Score = 27.2 bits (59), Expect = 3.1
Identities = 24/188 (12%), Positives = 45/188 (23%), Gaps = 22/188 (11%)
Query: 28 MAVKWNGEGGKVLYTLTNHKSKVMAVK-----WVLNTSLDPEHKDLVSCSLDKTAILWKY 82
+GE + ++ V V EH + + + +L
Sbjct: 132 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 191
Query: 83 VSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDP---------TTGLWLETARVGEVG 133
+ + L + L + A + VG+
Sbjct: 192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP 251
Query: 134 GNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVT--------TWKQIQTLPCHQLTITQLAF 185
G + +H GS+ L T WK++ L +
Sbjct: 252 HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 311
Query: 186 SPDDTHLV 193
P +HL
Sbjct: 312 HPKSSHLY 319
Score = 26.5 bits (57), Expect = 5.7
Identities = 26/327 (7%), Positives = 79/327 (24%), Gaps = 34/327 (10%)
Query: 14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSL 73
G+ L +++ + + + + +V+ + + +
Sbjct: 73 GRYLLV-IGRDARIDMIDLWAKEPTKVAEIKIGIEA-RSVESSKFKGYEDRYT-IAGAYW 129
Query: 74 DKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLW--LETARVGE 131
+ + R + + I+ + + + ET +V
Sbjct: 130 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 189
Query: 132 VGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTH 191
V + ++ G+ S +T + +L+ D
Sbjct: 190 VNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 249
Query: 192 LVSVSR-----DRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW--------------GV 232
R ++G S ++ H + W +
Sbjct: 250 TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI 309
Query: 233 AWSHDSRYFL-------TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYS 285
S + V+ L + ++ W ++ + +
Sbjct: 310 KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE---GAKRVVQ 366
Query: 286 LAASHDGTLLASACKATKPEHAAIIIW 312
+ G + + K + +A+++
Sbjct: 367 PEYNKRGDEVWFSVWNGKNDSSALVVV 393
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 49.4 bits (117), Expect = 2e-07
Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 19/210 (9%)
Query: 60 SLDPEHKDLVSCSLDKTAILW-----KYVS--EGNYLPYHMRDDSKQLHLLSCSMDKSII 112
D E+ V+ L + + + Y + R + +L D +
Sbjct: 27 DWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVN 86
Query: 113 VWAPDPTTGLWLETARVGEVGGNTLGF-YGCKFGPRGDYIIAHGFQGSLH--LDVTTWKQ 169
+ D A + ++G G Y IA + + +D T +
Sbjct: 87 MI--DLWMKEPTTVAEI-KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 143
Query: 170 IQTLPCHQLTITQLAFSPD-DTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI 228
+ +T + + P+ + S R + + +G++ LV +D N I
Sbjct: 144 KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 203
Query: 229 -----IWGVAWSHDSRYFLTISRDGVCVVW 253
+ RYF+T + +V
Sbjct: 204 SAERFLHDGGLDGSHRYFITAANARNKLVV 233
Score = 48.3 bits (114), Expect = 6e-07
Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 5/142 (3%)
Query: 162 LDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKT 221
+D +T++ L + S +L + RD + + + VA K
Sbjct: 47 IDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDL-WMKEPTTVA-EIKI 103
Query: 222 NGVHKRIIWGVAWSHDSRY-FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHG 280
+ I + +Y V+ ++ + + Q+ Y
Sbjct: 104 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE-YHPE 162
Query: 281 YEIYSLAASHDGTLLASACKAT 302
+ ++ ASH K T
Sbjct: 163 PRVAAILASHYRPEFIVNVKET 184
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 49.5 bits (116), Expect = 2e-07
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 180 ITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSR 239
I+ A++ D T + + +Y++ + + + + H + GV W+ DS
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-----HNGQVTGVDWAPDSN 64
Query: 240 YFLTISRDGVCVVW 253
+T D VW
Sbjct: 65 RIVTCGTDRNAYVW 78
Score = 44.8 bits (104), Expect = 7e-06
Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 10/70 (14%)
Query: 229 IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAA 288
I AW+ D + ++ W +V +L H ++ +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYE----------KSGNKWVQVHELKEHNGQVTGVDW 59
Query: 289 SHDGTLLASA 298
+ D + +
Sbjct: 60 APDSNRIVTC 69
Score = 42.2 bits (97), Expect = 5e-05
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 140 YGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
+ I +H+ W Q+ L H +T + ++PD +V+
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70
Query: 197 RDRRWGLYKRQ 207
DR ++ +
Sbjct: 71 TDRNAYVWTLK 81
Score = 34.1 bits (76), Expect = 0.017
Identities = 28/269 (10%), Positives = 61/269 (22%), Gaps = 43/269 (15%)
Query: 32 WNGEGGK--VLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYL 89
+ G K ++ L H +V V W P+ +V+C D+ A +W
Sbjct: 34 YEKSGNKWVQVHELKEHNGQVTGVDW------APDSNRIVTCGTDRNAYVW------TLK 81
Query: 90 PYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGD 149
+ L + + G + +
Sbjct: 82 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 141
Query: 150 YIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSS 209
+ + + I ++ P T S
Sbjct: 142 STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL-------- 193
Query: 210 GRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTL 269
+ + GV +S + +S D + +
Sbjct: 194 ---------MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK------------ 232
Query: 270 WPEVQKLYGHGYEIYSLAASHDGTLLASA 298
V L + ++ + +L+A+
Sbjct: 233 KMAVATLASETLPLLAVTFITESSLVAAG 261
Score = 32.1 bits (71), Expect = 0.083
Identities = 22/236 (9%), Positives = 52/236 (22%), Gaps = 19/236 (8%)
Query: 22 NHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK 81
K V + + ++ S L
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF 195
Query: 82 YVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYG 141
S + + + + S D ++ + D + + TL
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA-------TLASETLPLLA 248
Query: 142 CKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW 201
F + A + + + Q + + D++
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 202 GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRY----FLTISRDGVCVVW 253
++G + +HK + ++ + F T DG +W
Sbjct: 309 SSEGSAAAGA--------GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 31.4 bits (69), Expect = 0.12
Identities = 13/153 (8%), Positives = 42/153 (27%), Gaps = 5/153 (3%)
Query: 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL 160
+ C + + ++ + + W +V E+ + G + P + I+ G +
Sbjct: 21 QIAICPNNHEVHIY--EKSGNKW---VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 75
Query: 161 HLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220
++ + + + + + + +
Sbjct: 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 135
Query: 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
+ + + W +S S D C ++
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 168
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 47.1 bits (110), Expect = 1e-06
Identities = 46/310 (14%), Positives = 86/310 (27%), Gaps = 23/310 (7%)
Query: 10 NGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLV 69
+ GK L TL H V + + T K ++T
Sbjct: 43 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 102
Query: 70 SCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH------LLSCSMDKSIIVWAPDPTTGLW 123
+K + + L + ++ A D +W
Sbjct: 103 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 162
Query: 124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182
G ++++ S+ + DV T I TL HQ +
Sbjct: 163 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 222
Query: 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242
+ + LVS + D ++ + C G +K + + +
Sbjct: 223 MELKDN--ILVSGNADSTVKIWD------IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274
Query: 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASACKAT 302
T S DG +W L +LV + G G ++ + AS+ + A
Sbjct: 275 TSSDDGTVKLWDLKTGEFIRNLV-------TLESGGSGGVVWRIRASNTKLVCAVGS-RN 326
Query: 303 KPEHAAIIIW 312
E +++
Sbjct: 327 GTEETKLLVL 336
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 46.1 bits (108), Expect = 2e-06
Identities = 15/244 (6%), Positives = 38/244 (15%), Gaps = 24/244 (9%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVK-WVLNTSLDPEHKDL-VSCSLDKTAILW-----KYVS 84
++ + + + +V V L A
Sbjct: 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160
Query: 85 EGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
S S+ N
Sbjct: 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQAN 220
Query: 145 GPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRD------ 198
P + + ++ F +V+ ++
Sbjct: 221 YPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280
Query: 199 --RRWGLYKRQSSGRLSLVACSDKTNGVHKRI-----IWGVAWSHDSRYFLTIS--RDGV 249
++ S V + I + + D + V
Sbjct: 281 LTVEHSRSCLAAAENTSSV--TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338
Query: 250 CVVW 253
++
Sbjct: 339 LDIY 342
Score = 35.0 bits (79), Expect = 0.010
Identities = 15/214 (7%), Positives = 40/214 (18%), Gaps = 21/214 (9%)
Query: 1 MKSEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSK-VMAVKWVLNT 59
+ + N L S A + G + + +
Sbjct: 122 VGPRVHIIGNCASSACLLF-FLFGSSAAAG-LSVPGASDDQLTKSASCFHIHPGAAATHY 179
Query: 60 SLDPEHKDLVSCSLDKTAILWKYVSE----GNYLPYHMRDDSKQLHLLSCSMDKSIIVWA 115
S A ++ N + + + + + +
Sbjct: 180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIP 239
Query: 116 PDPTTGLWLETARVG---EVGGNTLGFYGCKFGPRGDYIIAHGFQGSL----------HL 162
T + GF D I+ + S +
Sbjct: 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299
Query: 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
+ + + + + + D +
Sbjct: 300 TASVGQTSGPIS-NGHDSDAIIAAQDGASDNYAN 332
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 44.1 bits (102), Expect = 1e-05
Identities = 9/86 (10%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 168 KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKR 227
+ +Q + I+ + P + L+ S D +YK + + + +K
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL----LQSLRYKH 57
Query: 228 IIWGVAWSHDSRYFLTISRDGVCVVW 253
+ + ++ + + ++
Sbjct: 58 PLLCCNFIDNTDLQIYVGTVQGEILK 83
Score = 43.3 bits (100), Expect = 2e-05
Identities = 18/170 (10%), Positives = 45/170 (26%), Gaps = 13/170 (7%)
Query: 62 DPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTG 121
+ + + + + + +Q S+D + V D
Sbjct: 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228
Query: 122 LWLETAR--------VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQT 172
+ + R + +F PR ++ G G + ++ T K+I+
Sbjct: 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288
Query: 173 LPCHQLTITQLAFSPDDTHLVSVSRD---RRWGLYKRQSSGRLSLVACSD 219
+ + + D L + D + + S +
Sbjct: 289 FAKFN-EDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIF 337
Score = 39.8 bits (91), Expect = 3e-04
Identities = 23/293 (7%), Positives = 63/293 (21%), Gaps = 20/293 (6%)
Query: 7 DVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHK 66
L +K ++ + +Y T + + +
Sbjct: 39 KFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98
Query: 67 DLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLET 126
+ + G+ D + + +I + ++
Sbjct: 99 EANLGI-------CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151
Query: 127 ARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFS 186
++ G + + + ++ + K +
Sbjct: 152 KIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC 211
Query: 187 PDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISR 246
V+V G S + + + + +S ++ T
Sbjct: 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271
Query: 247 DGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
DG+ W N + K + E + + +L A
Sbjct: 272 DGIISCW-------------NLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
Score = 33.3 bits (74), Expect = 0.034
Identities = 11/106 (10%), Positives = 25/106 (23%), Gaps = 8/106 (7%)
Query: 156 FQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV 215
+ S + + + FSP L + D + Q+ ++
Sbjct: 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289
Query: 216 ACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTE 261
A ++ V + + D + E
Sbjct: 290 AKFNE--------DSVVKIACSDNILCLATSDDTFKTNAAIDQTIE 327
Score = 26.7 bits (57), Expect = 4.4
Identities = 6/54 (11%), Positives = 13/54 (24%), Gaps = 7/54 (12%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSE 85
WN + K + + + L + D T + +
Sbjct: 278 WNLQTRKKIKNFAKFNEDSV-------VKIACSDNILCLATSDDTFKTNAAIDQ 324
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 43.3 bits (100), Expect = 2e-05
Identities = 42/269 (15%), Positives = 87/269 (32%), Gaps = 25/269 (9%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
W+ + LT H V+ +++ + + + + + ++
Sbjct: 40 WDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA 97
Query: 92 HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI 151
+ +++CS D+SI VW T + L VG YI
Sbjct: 98 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------AVNVVDFDDKYI 151
Query: 152 IAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSG 210
++ ++ + + +T + ++TL H+ I D +VS S D L+ +
Sbjct: 152 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLWDIECGA 209
Query: 211 RLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLW 270
L + D++ ++ + DG VW L D
Sbjct: 210 CL---------RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL---VAALDPRAPAGT 257
Query: 271 PEVQKLYGHGYEIYSLAASHDGTLLASAC 299
++ L H ++ L D + S+
Sbjct: 258 LCLRTLVEHSGRVFRLQ--FDEFQIVSSS 284
Score = 29.8 bits (65), Expect = 0.35
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Query: 31 KWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILW 80
G L TL H +V +++ D +VS S D T ++W
Sbjct: 251 PRAPAGTLCLRTLVEHSGRVFRLQF------DEFQ--IVSSSHDDTILIW 292
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 42.5 bits (98), Expect = 3e-05
Identities = 32/225 (14%), Positives = 62/225 (27%), Gaps = 12/225 (5%)
Query: 11 GEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVS 70
E + + +V + G T + + + + + S
Sbjct: 171 LELQGTVESPMTPSQFATSVDISERG----LIATGFNNGTVQISELSTLRPLYNFESQHS 226
Query: 71 CSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVG 130
+ +I S L D + + + + + T
Sbjct: 227 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS---QASL 283
Query: 131 EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCH----QLTITQLAF 185
++ F G+ + + G+ G L DV T ++I TL H ++ LA
Sbjct: 284 GEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAV 343
Query: 186 SPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW 230
L L K SG + + S + + I W
Sbjct: 344 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 388
Score = 42.5 bits (98), Expect = 4e-05
Identities = 26/243 (10%), Positives = 58/243 (23%), Gaps = 50/243 (20%)
Query: 59 TSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYH---------------------MRDDS 97
S+ + VSCS D +W N P RD
Sbjct: 18 FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 77
Query: 98 KQLHLLSCSMDKSIIVW---APDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAH 154
+ + + S ++ + D T + E + + F+ K+G D +++H
Sbjct: 78 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 137
Query: 155 ------------------------GFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDT 190
+ + +++ T + S
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL 197
Query: 191 HLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVC 250
+ + + + + + S + + I V +S
Sbjct: 198 -IATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 251 VVW 253
Sbjct: 256 GCI 258
Score = 30.2 bits (66), Expect = 0.31
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
W+ + + + TL H + + +L ++D L + L K G
Sbjct: 316 WDVKTKERITTLNMHCDDIEIEEDIL--AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADL 373
Query: 92 HMRDDSKQLHLLSCSMDKSIIVW 114
+ L +D+SI +
Sbjct: 374 NE-------SLCCVCLDRSIRWF 389
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 41.3 bits (95), Expect = 1e-04
Identities = 32/285 (11%), Positives = 61/285 (21%), Gaps = 36/285 (12%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAV-KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLP 90
++ + + V + TSL P+ K L+ + EG
Sbjct: 83 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 142
Query: 91 YHMRDDSKQL-------HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCK 143
+ D S+ A + V L +
Sbjct: 143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 202
Query: 144 FGPRGDYII--AHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW 201
G + G + L K + + + P V+ R
Sbjct: 203 SQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 262
Query: 202 GLYKRQSSGRLSLVACSD-------KTNGVHKRI-----IWGVAWSHDSRYFL--TISRD 247
S KT + I + S D + L + D
Sbjct: 263 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGD 322
Query: 248 GVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDG 292
+ D ++ + G+ + + G
Sbjct: 323 KTLYIH---------DAESGEE---LRSVNQLGHGPQVITTADMG 355
Score = 33.2 bits (74), Expect = 0.030
Identities = 19/214 (8%), Positives = 40/214 (18%), Gaps = 21/214 (9%)
Query: 3 SEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLD 62
+ P GK L + + V +
Sbjct: 106 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHC 165
Query: 63 PEHKDLVSCSLDKTAILWKYVSEGNYLPY----HMRDDSKQLHLLSCSMDKSIIVWAP-- 116
+ + + + H K L+ + I
Sbjct: 166 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS 225
Query: 117 ------DPTTGLWLETARVG-------EVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL- 162
L G +V + + D + +
Sbjct: 226 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 285
Query: 163 DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVS 196
D T +++ I + S D+ L+
Sbjct: 286 DAKTGERLAKFE-MGHEIDSINVSQDEKPLLYAL 318
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 40.7 bits (94), Expect = 1e-04
Identities = 21/249 (8%), Positives = 47/249 (18%), Gaps = 28/249 (11%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY-------VS 84
+ + V NT+ + K L ++ A + +S
Sbjct: 53 IDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLS 112
Query: 85 EGNY-LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGE-VGGNTLGFYGC 142
E + C K++ V + V +
Sbjct: 113 EIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNAS 172
Query: 143 KFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW- 201
++ + G S + + P +V +
Sbjct: 173 RYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRY 232
Query: 202 ---------------GLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL--TI 244
G + + + S D +
Sbjct: 233 YVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLT 292
Query: 245 SRDGVCVVW 253
+ + VV
Sbjct: 293 ATSDL-VVM 300
Score = 31.5 bits (70), Expect = 0.12
Identities = 22/194 (11%), Positives = 40/194 (20%), Gaps = 21/194 (10%)
Query: 5 PGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPE 64
V+ G +T +S GK T + + K +
Sbjct: 117 AACVLAYPAGDDRFT-ALCESGKALTVTLDANGKEA-KRTMSDAFIDVDKDPAFVNASRY 174
Query: 65 HKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIV-WAPDPTTGLW 123
D + + + D S D W P
Sbjct: 175 KGDYLFTTYGGNVRSADFSG----------DKPAFGKPWSLLTDAERAEGWRPGGMQQTA 224
Query: 124 LETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQ 182
++ + G G P + ++++ L
Sbjct: 225 VQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVS------- 277
Query: 183 LAFSPDDTHLVSVS 196
+ S DD L
Sbjct: 278 IQVSEDDKPLFYGL 291
Score = 31.1 bits (69), Expect = 0.17
Identities = 24/296 (8%), Positives = 56/296 (18%), Gaps = 35/296 (11%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAV----KWVLNTSLDPEHKDLVSCSLDKTAILWKYVS--- 84
++ + K+L + A+ K + + + + +
Sbjct: 3 YDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTY--FSRGSHGTRTDVVEIIDNTTLDH 60
Query: 85 EGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGF--YGC 142
G + + ++ + T + +
Sbjct: 61 AGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACV 120
Query: 143 KFGPRGDYIIAHGFQGSLHLDVTTW-----KQIQTLPCHQLTITQLAFSPDD---THLVS 194
P GD + L VT + AF +
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 195 VSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW- 253
+ S T+ W +
Sbjct: 181 TTYGGNVRSADFSGDKPAFGKPWSLLTDAE-----RAEGWRPGGMQQTAVQAKQNRYYVL 235
Query: 254 ------GLGEPPTEEDLVQNTLWPEVQKLYGHGYE----IYSLAASHDGTLLASAC 299
G + P + V + + + + + S+ S D L
Sbjct: 236 MHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQVSEDDKPLFYGL 291
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 39.9 bits (91), Expect = 3e-04
Identities = 34/275 (12%), Positives = 61/275 (22%), Gaps = 24/275 (8%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPY 91
T H + K P S + +W + L
Sbjct: 43 VPVGSLTDTEIYTEHSHQTTVAKT------SPSGYYCASGDVHGNVRIWDTTQTTHILKT 96
Query: 92 -------HMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKF 144
++D S + + + K
Sbjct: 97 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP 156
Query: 145 GPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLY 204
I + +K T H + + ++PD + S D LY
Sbjct: 157 SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 216
Query: 205 KRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDL 264
+ + N H ++G+ WS D + S D +W ++
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW---------NV 267
Query: 265 VQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
+ + G E L L S
Sbjct: 268 ATLKVEKTIP--VGTRIEDQQLGIIWTKQALVSIS 300
Score = 35.6 bits (80), Expect = 0.006
Identities = 10/58 (17%), Positives = 14/58 (24%)
Query: 144 FGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRW 201
P GD I + V + + H T SP + S
Sbjct: 25 NTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNV 82
Score = 30.6 bits (67), Expect = 0.22
Identities = 28/273 (10%), Positives = 52/273 (19%), Gaps = 33/273 (12%)
Query: 8 VVNGEGGKVLYTLTNHKSKVMAVKWN---------GEGGKVLYTLTNHKSKVMA------ 52
V T H + K + G V T + ++
Sbjct: 42 TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF 101
Query: 53 ------------VKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQL 100
K + E V T+ +
Sbjct: 102 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFR 161
Query: 101 HLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSL 160
+ + I P GD I
Sbjct: 162 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 221
Query: 161 HLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDK 220
H ++ L +SPD T + S S D+ ++ +
Sbjct: 222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL------KVEKT 275
Query: 221 TNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
+ + + ++IS +G
Sbjct: 276 IPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 30.3 bits (66), Expect = 0.30
Identities = 8/77 (10%), Positives = 16/77 (20%), Gaps = 12/77 (15%)
Query: 179 TITQLAFSPDDTHLVSVSRD--RRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSH 236
T L +P + + + + + H S
Sbjct: 19 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYT----------EHSHQTTVAKTSP 68
Query: 237 DSRYFLTISRDGVCVVW 253
Y + G +W
Sbjct: 69 SGYYCASGDVHGNVRIW 85
Score = 30.3 bits (66), Expect = 0.33
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 51 MAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVS--EGNYLPYHMRDDSKQL-------H 101
V + P+ + S S DKT +W + +P R + +QL
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 295
Query: 102 LLSCSMDKSIIVWAPD 117
L+S S + I P+
Sbjct: 296 LVSISANGFINFVNPE 311
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 39.1 bits (89), Expect = 5e-04
Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 7/148 (4%)
Query: 144 FGPRGDYIIAHGFQGSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWG 202
+Y+I + + D K + L H + L ++ LVS S DR
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVR 77
Query: 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEE 262
++ + + + +Y +T SRD VW L + +
Sbjct: 78 VWDIKKGCC-----THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 132
Query: 263 DLVQNTLWPEVQKLYGHGYEIYSLAASH 290
D + +P V + H
Sbjct: 133 DHGEEHDYPLVFHTPEENPYFVGVLRGH 160
Score = 36.4 bits (82), Expect = 0.003
Identities = 25/246 (10%), Positives = 59/246 (23%), Gaps = 17/246 (6%)
Query: 8 VVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKD 67
V + + E + L H + V V N + + +
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 68 LVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETA 127
+ +S Y D ++ +S SMD +I +W + ++
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 128 RVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSP 187
D + + H ++ +
Sbjct: 242 H----------TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD 247
+++ + ++ +Y +S IW V + + +D
Sbjct: 292 VSDNILVSGSENQFNIYNLRSG------KLVHANILKDADQIWSVNFKGK-TLVAAVEKD 344
Query: 248 GVCVVW 253
G +
Sbjct: 345 GQSFLE 350
Score = 32.6 bits (72), Expect = 0.052
Identities = 33/314 (10%), Positives = 78/314 (24%), Gaps = 37/314 (11%)
Query: 10 NGEGGKVLYTLTNHKSKVMAVKWNGEG--------------GKVLYTLTNHKSKVMAVKW 55
+ K L L+ H V A+K+ G T+ +
Sbjct: 39 DSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Query: 56 VLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWA 115
L+ K +V+ S D T +WK E + + D + + V
Sbjct: 99 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158
Query: 116 PDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPC 175
+ + V G+ + + + +
Sbjct: 159 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS 218
Query: 176 HQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRI------- 228
+ T + ++ L+ + + + S + + A +D +
Sbjct: 219 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 278
Query: 229 -----IWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEI 283
+ + + S L + ++ L + + +I
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGSENQFNIYNL-----------RSGKLVHANILKDADQI 327
Query: 284 YSLAASHDGTLLAS 297
+S+ + A
Sbjct: 328 WSVNFKGKTLVAAV 341
Score = 32.2 bits (71), Expect = 0.073
Identities = 26/270 (9%), Positives = 60/270 (22%), Gaps = 10/270 (3%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSL---DPEHKDLVSCSLDKTAILWKYVSEGNY 88
++ K L L+ H V A+K+ L + V
Sbjct: 38 YDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV 97
Query: 89 LPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRG 148
+ + ++++ S D ++ VW + + V + G
Sbjct: 98 RCLDIVEYKNIKYIVTGSRDNTLHVWKLP-------KESSVPDHGEEHDYPLVFHTPEEN 150
Query: 149 DYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQS 208
Y + + + + + L +S
Sbjct: 151 PYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 210
Query: 209 SGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNT 268
R ++ S T + G + + + + + +
Sbjct: 211 HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDA 270
Query: 269 LWPEVQKLYGHGYEIYSLAASHDGTLLASA 298
+ Y H +L S
Sbjct: 271 NDYSRKFSYHHTNLSAITTFYVSDNILVSG 300
Score = 26.8 bits (57), Expect = 3.9
Identities = 25/219 (11%), Positives = 54/219 (24%), Gaps = 14/219 (6%)
Query: 42 TLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLH 101
TL H + V+ T L E +++ + DK ++ ++ + +
Sbjct: 7 TLRGHMTSVI-------TCLQFEDNYVITGADDKMIRVYDSIN--KKFLLQLSGHDGGVW 57
Query: 102 LLSCSMDKSIIV----WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQ 157
L + ++ V E +T+ YI+
Sbjct: 58 ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 117
Query: 158 GSLHL-DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA 216
+LH+ + + ++ + V V R + G + +
Sbjct: 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG 177
Query: 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGL 255
D T V + S
Sbjct: 178 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC 216
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 39.0 bits (89), Expect = 5e-04
Identities = 28/283 (9%), Positives = 63/283 (22%), Gaps = 36/283 (12%)
Query: 3 SEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLD 62
PG + + Y L NH + + + K + + + + ++
Sbjct: 40 FGPGTAMMAPDNRTAYVLNNHYGDI--YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS 97
Query: 63 PEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKS-----------I 111
P+ K++ + + YV + L D + +
Sbjct: 98 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 157
Query: 112 IVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTW---- 167
+ A + ++T + P Y H + T
Sbjct: 158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 217
Query: 168 ------------KQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV 215
++ F+ + R + RL+
Sbjct: 218 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY 277
Query: 216 ACSDKTNGVHKRI-----IWGVAWSHDSRYFLTISRDGVCVVW 253
K + K + VA+ V+
Sbjct: 278 --DLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 33.9 bits (76), Expect = 0.020
Identities = 16/126 (12%), Positives = 30/126 (23%), Gaps = 23/126 (18%)
Query: 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV-----ACSDKTNGVHKRIIWGVAWSHD 237
A +++ + L +V K + D
Sbjct: 2 PALKAGHEYMIVTNYP-----------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPD 50
Query: 238 SRY-FLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA 296
+R ++ + G L + G +YS A S DG +
Sbjct: 51 NRTAYVLNNHYGDIYGIDL------DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVY 104
Query: 297 SACKAT 302
+ T
Sbjct: 105 ATVNPT 110
Score = 33.6 bits (75), Expect = 0.027
Identities = 7/69 (10%), Positives = 16/69 (23%), Gaps = 11/69 (15%)
Query: 231 GVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASH 290
G A Y + + V D+ +T++ + + +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVV---------DVASDTVYKSCV--MPDKFGPGTAMMAP 49
Query: 291 DGTLLASAC 299
D
Sbjct: 50 DNRTAYVLN 58
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 36.5 bits (82), Expect = 0.003
Identities = 37/294 (12%), Positives = 76/294 (25%), Gaps = 54/294 (18%)
Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY-------------- 82
+VL T++ H + A+ L+S S D + W
Sbjct: 3 DEVLKTISGHNKGITALTV----------NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 52
Query: 83 -VSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETAR------------- 128
S+ DD+ +++ ++ S A G
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 129 -VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSP 187
+ V N+ G + G + + + ++ SP
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 172
Query: 188 DDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIW----GVAWSHDSRYFLT 243
+T++ + + LY QS + + + T
Sbjct: 173 SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 232
Query: 244 ISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLAS 297
S D ++ + P ++ L H + +L TL++S
Sbjct: 233 GSLDTNIFIYSVKRP-----------MKIIKALNAHKDGVNNLLWETPSTLVSS 275
Score = 29.9 bits (65), Expect = 0.33
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Query: 138 GFYGCKFGPRGDYIIAHGFQGSLHL-DVTTWKQ-IQTLPCHQLTITQLAFSPDDTHLVSV 195
+ D + ++ + V + I+ L H+ + L + T LVS
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 275
Query: 196 SRDR 199
D
Sbjct: 276 GADA 279
Score = 29.9 bits (65), Expect = 0.34
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 7/49 (14%)
Query: 35 EGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYV 83
K++ L HK V + W + LVS D W V
Sbjct: 246 RPMKIIKALNAHKDGVNNLLW------ETPST-LVSSGADACIKRWNVV 287
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 35.9 bits (81), Expect = 0.004
Identities = 21/215 (9%), Positives = 51/215 (23%), Gaps = 11/215 (5%)
Query: 23 HKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKY 82
++ + W +G K+ + ++ + D A+ ++
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192
Query: 83 VSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGC 142
S G + ++ D TG V + ++
Sbjct: 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTM--DLETGEMAMRE----VRIMDVFYFST 246
Query: 143 KFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWG 202
P D+ I+ +P + + S D + +
Sbjct: 247 AVNPAKTRAFGAYNVLESF-DLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLA 304
Query: 203 LYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHD 237
Y ++ L D + ++ D
Sbjct: 305 AYDAET---LEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 35.6 bits (80), Expect = 0.007
Identities = 31/297 (10%), Positives = 71/297 (23%), Gaps = 32/297 (10%)
Query: 3 SEPGDVVNGEGGKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSKVMAVKWVLNTSLD 62
P + GG++ Y N + VK + G+ L + + VK + +L
Sbjct: 34 PTPMVPMVAPGGRIAYATVNKSESL--VKIDLVTGETLGRIDLS-TPEERVKSLFGAALS 90
Query: 63 PEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIVWAPDPTTGL 122
P+ K L L + + + + + + +++ WA D +
Sbjct: 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS--- 147
Query: 123 WLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQ 182
++ +G + D I + Q +
Sbjct: 148 -----KLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202
Query: 183 LAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFL 242
D + + + ++
Sbjct: 203 YTARKDIDPADPTAYRTGLLTMD------------------LETGEMAMREVRIMDVFYF 244
Query: 243 TISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLASAC 299
+ + + E + K + YS+ S DG+ +
Sbjct: 245 STAVNPAKTRAFGAYNVLE---SFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG 298
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 34.9 bits (78), Expect = 0.009
Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 9/123 (7%)
Query: 179 TITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWS--H 236
T L++ P + + ++ V + G ++ V +S
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVV---QFTGHGSSVVTTVKFSPIK 75
Query: 237 DSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTLLA 296
S+Y + G +VWG + N I ++ +G L
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF----QVLAGPISDISWDFEGRRLC 131
Query: 297 SAC 299
Sbjct: 132 VVG 134
Score = 27.2 bits (58), Expect = 2.7
Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 4/89 (4%)
Query: 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHK 226
K I+ D +V D ++ +S + + G
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQ- 299
Query: 227 RIIWGVAWSHDSRYFLTISRDGVCVVWGL 255
GV + + +++S DG + L
Sbjct: 300 --QVGVVATGNG-RIISLSLDGTLNFYEL 325
Score = 27.2 bits (58), Expect = 3.1
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 32 WNGEGGKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWK 81
W+ K + T K ++ + + + + ++S SLD T ++
Sbjct: 278 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGN---GRIISLSLDGTLNFYE 324
Score = 26.4 bits (56), Expect = 5.1
Identities = 36/297 (12%), Positives = 74/297 (24%), Gaps = 21/297 (7%)
Query: 14 GKVLYTLTNHKSKVMAVKWNGEGGKVLYTLTNHKSK-VMAVKWVLNTSLDPEHKDLVSCS 72
+ + V + + T H S V VK+ S + L S
Sbjct: 29 TNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKF----SPIKGSQYLCSGD 84
Query: 73 LDKTAILWKYVSEGNYLPYHMRDDSKQL----HLLSCSMDKSIIVWAPDPTTGLWLETAR 128
I+W + + + S+ + S D
Sbjct: 85 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFI 144
Query: 129 VGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPD 188
+ G + G ++ S+ + P + + +
Sbjct: 145 SWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ 204
Query: 189 DTHLVSVSRDRRWGLYKRQSSGRLSL---------VACSDKTNGVHKRIIWGVAWSHDSR 239
+ + V G + + + + + DS+
Sbjct: 205 GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQ 264
Query: 240 YFLTISRDGVCVVWGL--GEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGTL 294
F T+ D VW + + + L + L + + G ++ S DGTL
Sbjct: 265 KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG-NGRIISLSLDGTL 320
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 34.6 bits (77), Expect = 0.011
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 6/84 (7%)
Query: 170 IQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRII 229
Q H IT L+ S D L S + + + + VH +I
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG------ISNRVFPDVHATMI 58
Query: 230 WGVAWSHDSRYFLTISRDGVCVVW 253
G+ + F D + VV
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVP 82
Score = 33.4 bits (74), Expect = 0.027
Identities = 27/258 (10%), Positives = 55/258 (21%), Gaps = 11/258 (4%)
Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD 96
G + H + A+ + K L S + W + + +
Sbjct: 2 GSIDQVRYGHNKAITALSS------SADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 55
Query: 97 SKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGF 156
+ + + S V D + + V G
Sbjct: 56 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 115
Query: 157 QGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA 216
T + +A S D + +D + +YK +
Sbjct: 116 AACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV----- 170
Query: 217 CSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKL 276
KT I ++ + T V +V +
Sbjct: 171 SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV 230
Query: 277 YGHGYEIYSLAASHDGTL 294
+ S D ++
Sbjct: 231 SWSPDNVRLATGSLDNSV 248
Score = 31.9 bits (70), Expect = 0.080
Identities = 42/306 (13%), Positives = 78/306 (25%), Gaps = 40/306 (13%)
Query: 14 GKVLYTLTNHKSKVMAVK-------------------WNGEGGKVLYTLTN-HKSKVMAV 53
G + H + A+ W+ G + H + + +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 54 KWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMDKSIIV 113
K L D ++ S + S Q L+ S D I V
Sbjct: 62 KTTSKGDLFTV------SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 115
Query: 114 WAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTL 173
A ++ + + + ++
Sbjct: 116 AACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 175
Query: 174 PCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVA 233
H IT +AFS + LV+ + R+ Y ++ + H + V+
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE----LAHTNSWTFHTAKVACVS 231
Query: 234 WSHDSRYFLTISRDGVCVVWGLGEPPTEEDLVQNTLWPEVQKLYGHGYEIYSLAASHDGT 293
WS D+ T S D +VW + + H + + T
Sbjct: 232 WSPDNVRLATGSLDNSVIVWN----------MNKPSDHPIIIKGAHAMSSVNSVIWLNET 281
Query: 294 LLASAC 299
+ SA
Sbjct: 282 TIVSAG 287
Score = 30.0 bits (65), Expect = 0.38
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 273 VQKLYGHGYEIYSLAASHDGTLLASACK 300
Q YGH I +L++S DG L SA
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADA 32
Score = 28.8 bits (62), Expect = 0.74
Identities = 11/87 (12%), Positives = 26/87 (29%), Gaps = 5/87 (5%)
Query: 167 WKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVACSDKTNGVHK 226
+ H + +++SPD+ L + S D ++ ++ G H
Sbjct: 214 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII-----IKGAHA 268
Query: 227 RIIWGVAWSHDSRYFLTISRDGVCVVW 253
+ ++ +D W
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 27.3 bits (58), Expect = 2.4
Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 139 FYGCKFGPRGDYIIAHGFQGSLHL---DVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSV 195
+ P + S+ + + + I H ++ ++T +VS
Sbjct: 227 VACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSA 286
Query: 196 SRDR 199
+D
Sbjct: 287 GQDS 290
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 34.9 bits (80), Expect = 0.011
Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 23/179 (12%)
Query: 140 YGCKFGPRGDYIIAHGFQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHL------- 192
G++ + + + + +P + L SPD +
Sbjct: 221 RIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPH-GLNTSPDGKYFIANGKLS 279
Query: 193 --VSV-SRDRRWGLYKRQSSGRLSLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGV 249
VSV + D+ L++ + R ++VA + + T+ D
Sbjct: 280 PTVSVIAIDKLDDLFEDKIELRDTIVA-----EPELGLGPLHTTFDGRGNAYTTLFIDSQ 334
Query: 250 CVVWGLGEPPTEEDLVQNTLWPEVQKL---Y--GHGYEIYSLAASHDGTLLASACKATK 303
W + + + + + QKL Y GH + + + DG L K +K
Sbjct: 335 VCKWNIADAIKHYN--GDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSK 391
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 27.5 bits (59), Expect = 2.3
Identities = 20/217 (9%), Positives = 51/217 (23%), Gaps = 14/217 (6%)
Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDD 96
G + + +M+ W P+ L + + + N +
Sbjct: 28 GYNQFVVHRSPQPLMSPAW------SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF 81
Query: 97 SKQLHLLSCSMD-KSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHG 155
+ + S D + + P +
Sbjct: 82 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNL 141
Query: 156 FQGSLHLDVTTWKQIQTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLV 215
S Q+ + + ++ + VS D ++ + + G+ +
Sbjct: 142 AFTSDQ---AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 198
Query: 216 ACSDKTNGV----HKRIIWGVAWSHDSRYFLTISRDG 248
T GV + + + + + S G
Sbjct: 199 KQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 235
>d1zcba1 a.66.1.1 (A:76-201) Transducin (alpha subunit), insertion
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 26.5 bits (58), Expect = 2.3
Identities = 7/59 (11%), Positives = 12/59 (20%), Gaps = 4/59 (6%)
Query: 236 HDSRYFLTISRDGVCVVWGLGEPPTEEDLVQ--NTLW--PEVQKLYGHGYEIYSLAASH 290
+ G+ E + LW +Q Y E +
Sbjct: 42 LHGDKLMAFDTRAPMAAQGMVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVK 100
>d1ti8a1 b.19.1.2 (A:13-325) Hemagglutinin {Influenza A virus,
different strains [TaxId: 11320]}
Length = 314
Score = 27.0 bits (60), Expect = 3.1
Identities = 10/61 (16%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 216 ACSDKTNGVHKRIIWGVAWSHDSRY-FLTIS-----RDGVCVVWGLGEPPTEEDLVQNTL 269
AC + + + W ++ + ++ + +T S +D ++WG+ + + Q L
Sbjct: 126 ACRRSGSSFYAEMKWLLSNTDNAAFPQMTKSYKNTRKDPALIIWGIHHSGSTTE--QTKL 183
Query: 270 W 270
+
Sbjct: 184 Y 184
>d1qz8a_ b.140.1.1 (A:) Replicase NSP9 {SARS coronavirus [TaxId:
227859]}
Length = 111
Score = 25.9 bits (57), Expect = 3.2
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 9 VNGEGGKVLYTLTNHKSKVMAVKWNGEGGK 38
N +GG+ + L + + ++ G
Sbjct: 31 NNSKGGRFVLALLSDHQDLKWARFPKSDGT 60
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 26.7 bits (58), Expect = 3.5
Identities = 11/100 (11%), Positives = 32/100 (32%), Gaps = 10/100 (10%)
Query: 37 GKVLYTLTNHKSKVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHM--R 94
GK ++ ++ +K ++ L ++K L + G + +
Sbjct: 266 GKYMFA-SSRANKFELQGYIAGFKLRDCGS------IEKQLFLSPTPTSGGH-SNAVSPC 317
Query: 95 DDSKQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGG 134
S + ++ + + ++ + R+ E G
Sbjct: 318 PWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGF 357
Score = 25.6 bits (55), Expect = 8.5
Identities = 6/46 (13%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 171 QTLPCHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRLSLVA 216
+T I+ + F + ++ + +W + +S + A
Sbjct: 33 RTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA 77
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 26.3 bits (56), Expect = 4.9
Identities = 19/161 (11%), Positives = 39/161 (24%), Gaps = 14/161 (8%)
Query: 98 KQLHLLSCSMDKSIIVWAPDPTTGLWLETARVGEVGGNTLGFYGCKFGPRGDYI-IAHGF 156
KQ ++ + I VW + L +V +V G P Y+ +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGA--LTLTQVVDVPGQV---QPMVVSPDKRYLYVGVRP 57
Query: 157 QGSLHL-DVTTWKQIQTLP---CHQLTITQLAFSPDDTHLVSVSRDRRWGLYKRQSSGRL 212
+ + + T ++T ++ + S + R G
Sbjct: 58 EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL- 116
Query: 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRDGVCVVW 253
S D+R + +
Sbjct: 117 ---PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICL 154
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 26.1 bits (56), Expect = 6.9
Identities = 31/234 (13%), Positives = 69/234 (29%), Gaps = 20/234 (8%)
Query: 49 KVMAVKWVLNTSLDPEHKDLVSCSLDKTAILWKYVSEGNYLPYHMRDDSKQLHLLSCSMD 108
K + + + P+ D+ D+T + + + +++ ++ +
Sbjct: 140 KPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYE 199
Query: 109 KSIIVWAPDPT---------TGLWLETARVGEVGGNTLGFYGCKFGPRGDYIIAHGFQGS 159
+I G + V + G + ++ G R Y+ +
Sbjct: 200 IPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFAT--GWRLGYMYFVDPENK 257
Query: 160 LHLDVTTWKQIQTLPCHQLTITQLA----FSPDDTHLVSVS---RDRRWGLYKRQSSGRL 212
L ++ + T Q A + +L ++RR +YKR +
Sbjct: 258 LSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPG 317
Query: 213 SLVACSDKTNGVHKRIIWGVAWSHDSRYFLTISRD-GVCVVWGLGEPPTEEDLV 265
+ +I G W +D + L + + V V G G
Sbjct: 318 ISTTKPQGAFYIFPKIEVG-PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHF 370
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.436
Gapped
Lambda K H
0.267 0.0403 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,188,402
Number of extensions: 53776
Number of successful extensions: 399
Number of sequences better than 10.0: 1
Number of HSP's gapped: 236
Number of HSP's successfully gapped: 125
Length of query: 312
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 227
Effective length of database: 1,240,546
Effective search space: 281603942
Effective search space used: 281603942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)