RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15197
(902 letters)
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 532 bits (1372), Expect = 0.0
Identities = 253/389 (65%), Positives = 305/389 (78%), Gaps = 1/389 (0%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
VTHDIT +KA +F IGK+TP+A RFSTV GE GSADT RDPRGFA+KFYTEDGNWDLV
Sbjct: 83 VTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLV 142
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNNTPIFF+RDP F FIHSQKRNP THL+D D WDF SL PE+ HQV LFSDRGIP
Sbjct: 143 GNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIP 202
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
DG RHM+GYGSHTFKLVN + E VYCKFH++TDQGIKN+S + A +L+ DPDY IRDL+
Sbjct: 203 DGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLF 262
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
+ IA G +PSWTFYIQVMTF +A+T+ +NPFD+TK+WP D+PL+PVG +VL++NP NY+
Sbjct: 263 NAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYF 322
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
AE+EQ+AF+P+N+ PGIE +PDKMLQGRL +Y DTH HRLG N+ IPVNCPYR RVANY
Sbjct: 323 AEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANY 382
Query: 813 QRDAPMAID-NQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRIL 871
QRD PM + NQ GAPNYYPNSF PE P + +G+V+R+ T ++DN +Q R
Sbjct: 383 QRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAF 442
Query: 872 WSNVLDDAARDRMTTNIASVLKLAAPFIQ 900
+ NVL++ R R+ NIA LK A FIQ
Sbjct: 443 YVNVLNEEQRKRLCENIAGHLKDAQIFIQ 471
Score = 92.3 bits (229), Expect = 4e-20
Identities = 47/120 (39%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 91 PVDTTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGY 150
V TT AGNPV + + T+GP GP+ ++D + D++ HF ER PERVVHAKG GAFGY
Sbjct: 21 DVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGY 80
Query: 151 FEDRETIIKTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEVRKLPAG 210
FE I K Y K+F G++ P V + G G + + P G
Sbjct: 81 FEVTHDITK-------------YSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRG 127
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId:
1351]}
Length = 474
Score = 516 bits (1330), Expect = e-176
Identities = 197/390 (50%), Positives = 266/390 (68%), Gaps = 5/390 (1%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
V+ + TKA SE+GK+TP+ ARFSTV GE GS+DT RDPRGFALKFYT++GN+DLV
Sbjct: 63 VSQSMAQYTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRGFALKFYTDEGNYDLV 122
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNNTPIFF+RD +F FIHSQKRNP THL+ +A WDF S PE+ HQV IL SDRGIP
Sbjct: 123 GNNTPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSDRGIP 182
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
FRHMHG+GSHTFK VN E + K+HF+T+QGIKN+ Q A ++A +PD+ I DL+
Sbjct: 183 LSFRHMHGFGSHTFKWVNAAGEVFFVKYHFKTNQGIKNLESQLAEEIAGKNPDFHIEDLH 242
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
+ I FPSWT +Q++ + +A T + FDVTK Q ++PL+ VG M L++NP NY+
Sbjct: 243 NAIENQEFPSWTLSVQIIPYADALTMKETLFDVTKTVSQKEYPLIEVGTMTLNRNPENYF 302
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
AE+EQ+ F+P N +PGIE +PDK+LQGRL +Y D H HR+GAN +Q+P+N + V NY
Sbjct: 303 AEVEQVTFSPGNFVPGIEASPDKLLQGRLFAYGDAHRHRVGANSHQLPINQA-KAPVNNY 361
Query: 813 QRDAPMAIDNQNGAPNYYPNSFK-GPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRIL 871
Q+D M +N N NY PNS+ P+ P S++ G+V Y ++D+F+Q L
Sbjct: 362 QKDGNMRFNNGNSEINYEPNSYTETPKEDPTAKISSFEVEGNVGNYSY-NQDHFTQANAL 420
Query: 872 WSNVLDDAARDRMTTNIASVL-KLAAPFIQ 900
+ N+L ++ + NIA+ L ++ I
Sbjct: 421 Y-NLLPSEEKENLINNIAASLGQVKNQEII 449
Score = 93.4 bits (232), Expect = 2e-20
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFED 153
TTS G+PV T G GPV ++D + L+KL HF ER PERVVHAKG GA G F+
Sbjct: 4 TTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGIFKV 63
Query: 154 RETIIKTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEVRKLPAG 210
+++ + Y G+ P + G G + + P G
Sbjct: 64 SQSMAQ-------------YTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRG 107
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
Length = 476
Score = 512 bits (1319), Expect = e-174
Identities = 196/390 (50%), Positives = 256/390 (65%), Gaps = 4/390 (1%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
VTHDIT T+A IFSE+GK+T + ARFSTV GERG+AD RD RGFALKFYTE+GNWD+V
Sbjct: 63 VTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMV 122
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNNTP+F++RDP +F H KR+P T++R+ WDF S LPE+ HQ+ I SDRG+P
Sbjct: 123 GNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLP 182
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
+R +HG+GSHT+ +NKDNE + KFHFR QGIKN+ A L D + S RDL+
Sbjct: 183 LSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDLF 242
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
+ I +G++P W IQ+M +EA T +NPFD+TK+WP +D+PL+ VG+ L++NP NY+
Sbjct: 243 EAIKRGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNYF 302
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
+++EQ AF+P N++PGI +PDKMLQGRL SY D H +RLG N +QIPVN P + NY
Sbjct: 303 SDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAP-KCPFHNY 361
Query: 813 QRDAPMAID-NQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYK-TEDEDNFSQPRI 870
RD M +D N Y PNS + P + G + EDED FSQPR
Sbjct: 362 HRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRA 421
Query: 871 LWSNVLDDAARDRMTTNIASVLKLAAPFIQ 900
L+ +L D RM IA L A+ Q
Sbjct: 422 LY-ELLSDDEHQRMFARIAGELSQASKETQ 450
Score = 93.0 bits (231), Expect = 2e-20
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFED 153
TT+AG PV + T GP GP+ L+D ++L+KL HF E PER +HAKG GAFG F
Sbjct: 4 TTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAFGTFTV 63
Query: 154 RETIIKTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEVRKLPAGV-V 212
I K Y K+F G++ + G G + + G +
Sbjct: 64 THDITK-------------YTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFAL 110
Query: 213 KIEFACLVMRIV 224
K +V
Sbjct: 111 KFYTEEGNWDMV 122
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId: 210]}
Length = 491
Score = 503 bits (1297), Expect = e-171
Identities = 194/396 (48%), Positives = 253/396 (63%), Gaps = 10/396 (2%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
VT DIT TKA IFS++GK+T RFSTV GERGSAD RDPRGFA+K+YTE+GNWDLV
Sbjct: 68 VTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLV 127
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNNTP+FF+RD +F FIH+QKR+P T+L + D WDF S +PE+ +QV + SDRGIP
Sbjct: 128 GNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIP 187
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
FRHM G+GSHTF L+N E + KFHF T QG+K+++ + A ++ DPD + RDL+
Sbjct: 188 KSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPDSNQRDLF 247
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
D IA+G++P W IQVM E+AK YR++PFDVTKIW D+PL+ VG + L+KNP NY+
Sbjct: 248 DAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYF 307
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
AE+EQ AF P N++PGI +PD+MLQGRL SY DTH +RLG N+ QIPVN P R +
Sbjct: 308 AEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSS 366
Query: 813 QRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVK-------RYKTEDEDNF 865
RD M NY P+S G + +N K Y+ +D D +
Sbjct: 367 SRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
Query: 866 SQPRILWSNVLDDAARDRMTTNIASVLKLAA-PFIQ 900
+QP + L ++R+ I L I
Sbjct: 427 TQPGDYY-RSLPADEKERLHDTIGESLAHVTHKEIV 461
Score = 92.3 bits (229), Expect = 4e-20
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFE 152
TT+ G PV + + T GP GPV L+ T++L+KL F ER PERVVHAKG GA+G F
Sbjct: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFT 67
Score = 81.9 bits (202), Expect = 8e-17
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 159 KTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEV 204
T GP GPV L+ T++L+KL F ER PERVVHAKG GA+G F V
Sbjct: 23 ITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus [TaxId:
1270]}
Length = 498
Score = 499 bits (1286), Expect = e-169
Identities = 179/392 (45%), Positives = 241/392 (61%), Gaps = 6/392 (1%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
VT D++ TKA +F + G +T RFSTV GE GS DT RD RGFAL+FYTE+GN+DLV
Sbjct: 68 VTEDVSKYTKALVF-QPGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLV 126
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNNTPIFF+RDP +F HFI SQKR P + LRD WDF + PE+ HQV L RG+P
Sbjct: 127 GNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLP 186
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
+R M+GYGSHT+ VN E + K+HF + QG+ N+S ATK+A + D+ +DL+
Sbjct: 187 RTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLF 246
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
++IAKG+ P W YIQ + +EE KTYR+NPFD+TK Q D+P + VG + L++NP N++
Sbjct: 247 ESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHF 306
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
A+IE AF+P+N +PGI +PD+ML GR +Y D ++R+GA+ NQ+PVN P + V NY
Sbjct: 307 AQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRP-KNAVHNY 365
Query: 813 QRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAW-STYNATGDVKRY---KTEDEDNFSQP 868
+ M D+ Y PNS G + A G + R D+D+F Q
Sbjct: 366 AFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQA 425
Query: 869 RILWSNVLDDAARDRMTTNIASVLKLAAPFIQ 900
L V D RD +A LK +Q
Sbjct: 426 GTLVREVFSDQERDDFVETVAGALKGVRQDVQ 457
Score = 90.4 bits (224), Expect = 2e-19
Identities = 27/59 (45%), Positives = 32/59 (54%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFE 152
T G P S+ T+G GP+ L DT+ L+ HF PER HAKG GAFG FE
Sbjct: 9 TRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFE 67
Score = 81.1 bits (200), Expect = 2e-16
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 159 KTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEV 204
T+G GP+ L DT+ L+ HF+ PER HAKG GAFG FEV
Sbjct: 23 LTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEV 68
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 488
Score = 494 bits (1272), Expect = e-167
Identities = 188/398 (47%), Positives = 249/398 (62%), Gaps = 10/398 (2%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
VT DIT + +A+FS+IGK+T RFSTV G++GSADT RDPRGFA KFYTE+GN D V
Sbjct: 68 VTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWV 127
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLL--PETTHQVMILFSDRG 630
NNTP+FF+RDP +F HFIH+QKRNP T+LRD D FWDF++ HQVMILFSDRG
Sbjct: 128 YNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQVMILFSDRG 187
Query: 631 IPDGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRD 690
P +R MHGY HT+K NK+ + Y + H +TDQGIKN++ + ATK+A ++PDY +D
Sbjct: 188 TPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLTIEEATKIAGSNPDYCQQD 247
Query: 691 LYDNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGN 750
L++ I GN+PSWT YIQ MT +AK ++ FD+TK+WPQ FPL VG +VL++NP N
Sbjct: 248 LFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLN 307
Query: 751 YYAEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYR-VRV 809
++A++EQ AF P+ +P E + D +LQ RL SY D H +RLG NF+QIPVNCPY
Sbjct: 308 FFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYADAHRYRLGPNFHQIPVNCPYASKFF 367
Query: 810 ANYQRDAPMAID-NQNGAPNYYPNSFKGPEPTPRGAWSTYNAT--GDVKRYK---TEDED 863
RD PM ++ N P Y N + G Y + +
Sbjct: 368 NPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPIQQHQEVWNGPAIPYHWATSPGDV 427
Query: 864 NFSQPRILWSNVLDDAA-RDRMTTNIASVLKLAAPFIQ 900
+F Q R L+ + + + NI ++ A P IQ
Sbjct: 428 DFVQARNLYRVLGKQPGQQKNLAYNIGIHVEGACPQIQ 465
Score = 93.5 bits (232), Expect = 2e-20
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFED 153
T S GNP++ + + IG HGP+ L+D +D L HF E P+R HA G GAFGYFE
Sbjct: 9 TNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEV 68
Query: 154 RETIIKTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEVRKLPAGV 211
+ I +F G+R + GG G + + P G
Sbjct: 69 TDDITD-------------ICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGF 113
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId: 317]}
Length = 484
Score = 488 bits (1258), Expect = e-165
Identities = 154/388 (39%), Positives = 220/388 (56%), Gaps = 5/388 (1%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
+ DI+ L+KA +F G++TPV RFS+V S +T RDP GFA KFYT DGNWDLV
Sbjct: 64 ASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLV 122
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIP 632
GNN P FF+RD +F +H+ K +P T+L + +DF S +PE T + +L+S+ G P
Sbjct: 123 GNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTP 182
Query: 633 DGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSIRDLY 692
G+R M G G H +KLVN E Y KFH+++ QGIKN+ P+ ++ + D + DL
Sbjct: 183 AGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNLDPKEVAQVQSKDYSHLTNDLV 242
Query: 693 DNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNPGNYY 752
I KG+FP W Y+QV+ EE + ++P D TKIWP D P +G MVL+KN N++
Sbjct: 243 GAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDATKIWP--DVPEKKIGQMVLNKNVDNFF 300
Query: 753 AEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGANFNQIPVNCPYRVRVANY 812
E EQ+A P NL+PGIEP+ D++LQGR+ SY DT ++RLGAN +PVN P +V V N
Sbjct: 301 QETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGANGLSLPVNQP-KVAVNNG 359
Query: 813 QRDAPMAIDNQNGAPNYYPNSFKGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILW 872
+D + + NY P+ + + +S +G ++ K E NF Q L+
Sbjct: 360 NQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLY 419
Query: 873 SNVLDDAARDRMTTNIASVLKLAAPFIQ 900
+ + L +
Sbjct: 420 -RSYSAKEKTDLVQKFGESLADTLTESK 446
Score = 91.1 bits (226), Expect = 9e-20
Identities = 27/59 (45%), Positives = 30/59 (50%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFE 152
T G V +T G GPV L+D L KL F ER PERVVHA+G G G F
Sbjct: 5 TRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFT 63
Score = 81.1 bits (200), Expect = 1e-16
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 159 KTIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEV 204
+T G GPV L+D L KL F ER PERVVHA+G G G F
Sbjct: 19 QTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTA 64
>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII
[TaxId: 562]}
Length = 571
Score = 487 bits (1256), Expect = e-164
Identities = 156/403 (38%), Positives = 228/403 (56%), Gaps = 17/403 (4%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFYTEDGNWDLV 572
++ +TKA S+ K TPV RFSTV G GSADT R RGFA KFYTE+G +DLV
Sbjct: 114 PYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRQIRGFATKFYTEEGIFDLV 173
Query: 573 GNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRD----WDAFWDFISLLPETTHQVMILFSD 628
GNNTPIFF++D +F F+H+ K P + D FWD++SL PET H VM SD
Sbjct: 174 GNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSD 233
Query: 629 RGIPDGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPDYSI 688
RGIP +R M G+G HTF+L+N + + + +FH++ G ++ A KL DPD+
Sbjct: 234 RGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHR 293
Query: 689 RDLYDNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFPLLPVGHMVLDKNP 748
R+L++ I G+FP + Q++ E+ + ++ D TK+ P+ P+ VG MVL++NP
Sbjct: 294 RELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNP 353
Query: 749 GNYYAEIEQLAFNPNNLIPGIEPTPDKMLQGRLHSYIDTHIHRLGA-NFNQIPVNCPYRV 807
N++AE EQ AF+P +++PG++ T D +LQGRL SY DT I RLG NF++IP+N P
Sbjct: 354 DNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRP-TC 412
Query: 808 RVANYQRDAPMAIDNQNGAPNYYPNSFKGPEPTP------RGAWSTYNA--TGDVKRYKT 859
N+QRD + NY PNS P RG + +Y G+ R ++
Sbjct: 413 PYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERS 472
Query: 860 E-DEDNFSQPRILWSNVLDDAARDRMTTNIA-SVLKLAAPFIQ 900
+ +S PR+ W + + + + K+ P+I+
Sbjct: 473 PSFGEYYSHPRLFW-LSQTPFEQRHIVDGFSFELSKVVRPYIR 514
Score = 90.0 bits (223), Expect = 4e-19
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 94 TTSAGNPVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFE 152
TT+ G + + G GP LED +K+ HF ER PER+VHA+G A GYF+
Sbjct: 55 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQ 113
Score = 80.4 bits (198), Expect = 3e-16
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 160 TIGPHGPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEV 204
G GP LED +K+ HF ER PER+VHA+G A GYF+
Sbjct: 70 RAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 114
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein,
N-terminal domain {Black sea rod (Plexaura homomalla)
[TaxId: 47982]}
Length = 366
Score = 321 bits (825), Expect = e-103
Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 45/304 (14%)
Query: 513 VTHDITHLTKAAIFSEIGKQTPVAARFSTVWGERGSADTNRDPRGFALKFY--TEDGNWD 570
+ +D + F+ G+ P R + + + D D R F++KF DG D
Sbjct: 77 IVNDPKF-PEHEFFTA-GRTFPARLRHANL---KYPDDAGADARSFSIKFADSDSDGPLD 131
Query: 571 LVGNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMILFSDRG 630
+V N + F+ ++ + +++ P + ++ + R
Sbjct: 132 IVMNTGEANIFWNSPSLEDFVPVEEGDAA---------EEYVYKNPYYYYNLV--EALRR 180
Query: 631 IPDGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATK------------ 678
PD F H++ Y T KD + YC++ ++
Sbjct: 181 APDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFS 240
Query: 679 ---LAATDPDYSIRDLYDNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSDFP 735
DY ++ + + KG ++ IQ+ T F +W + P
Sbjct: 241 RHENEKRPDDYLRKEYVERLQKGP-VNYRLQIQIHEASPDDTA--TIFHAGILWDKETHP 297
Query: 736 LLPVGHMVLDKNPGNYYAEIEQLAFNPNNLIPGIEPTPDKM-------LQGRLHSYIDTH 788
+ + + +E+ AFN N + K + R+ Y
Sbjct: 298 WFDLAKVSIKTPLSP--DVLEKTAFNIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQ 355
Query: 789 IHRL 792
R
Sbjct: 356 HLRK 359
Score = 50.7 bits (121), Expect = 4e-07
Identities = 6/40 (15%), Positives = 12/40 (30%)
Query: 165 GPVPLEDTYYLDKLFHFSGERNPERVVHAKGGGAFGYFEV 204
+ L+ + + + R H G G G +
Sbjct: 38 LKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITI 77
Score = 50.0 bits (119), Expect = 7e-07
Identities = 13/85 (15%), Positives = 22/85 (25%), Gaps = 15/85 (17%)
Query: 114 GPVPLEDTYYLDKLFHFAGERNPERVVHAKGGGAFGYFEDRETIIKTIGPHGPVPLEDTY 173
+ L+ + + R H G G G + D
Sbjct: 38 LKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEIT---------------IVNDPK 82
Query: 174 YLDKLFHFSGERNPERVVHAKGGGA 198
+ + F +G P R+ HA
Sbjct: 83 FPEHEFFTAGRTFPARLRHANLKYP 107
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 182 bits (463), Expect = 6e-53
Identities = 78/175 (44%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 234 NRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGF 293
RGIT+D+ +FET +T++DAPGH+DFI NMITG +QAD A+L++ GEFE G
Sbjct: 67 ERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGI 126
Query: 294 ESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIE 353
GQTREHALL +LGV QL V +NK+D+V W + RFQEIV + F+K+ G+ +
Sbjct: 127 SKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYNPKTVP 186
Query: 354 YVPCSGLTGENLTTPSQVPALTSWY------------SGPCLLDVIDNFKTPSRP 396
+VP SG G+N+ + WY G LL+ ID + PSRP
Sbjct: 187 FVPISGWNGDNMIEAT---TNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRP 238
Score = 73.9 bits (181), Expect = 4e-15
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETG 83
K +++VVIGHVD+GKST GHL+Y G + R I K E E+ +LGK SF YAW+LD+
Sbjct: 4 KSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLK 63
Query: 84 EESSCEIPVDTT 95
E I +D
Sbjct: 64 AERERGITIDIA 75
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 143 bits (362), Expect = 2e-39
Identities = 67/164 (40%), Positives = 108/164 (65%), Gaps = 5/164 (3%)
Query: 234 NRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGF 293
RG+T+++ +FETK + T++DAPGH+DF+ NMITGA+QAD A+LVV A +GE+E G
Sbjct: 64 ERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGM 123
Query: 294 ESGGQTREHALLVRSLGVNQLGVVINKLDTVS--WSQDRFQEIVTKLGAFLKQAGFRDSD 351
GQTREH +L +++G++QL V +NK+D + + R++EIV ++ F++ GF +
Sbjct: 124 SVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNK 183
Query: 352 IEYVPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDNFKTPSR 395
+ +VP +G+N+T S WY+GP L + +D + P +
Sbjct: 184 VRFVPVVAPSGDNITHKS---ENMKWYNGPTLEEYLDQLELPPK 224
Score = 64.8 bits (157), Expect = 3e-12
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETG 83
K L+L+VIGHVD GKSTL+G LL G + + + + E +KKLGK+S +A++LD
Sbjct: 1 KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLK 60
Query: 84 EESSCEIPVDT 94
EE + ++
Sbjct: 61 EERERGVTINL 71
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 134 bits (339), Expect = 2e-36
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 235 RGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFE 294
RGIT++ ++ET ++ + +D PGH D+I NMITGA Q D A+LVV A G
Sbjct: 51 RGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP---- 106
Query: 295 SGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEY 354
QTREH LL R +GV + V +NK+D V + + ++ L Q F ++
Sbjct: 107 ---QTREHILLARQVGVPYIVVFMNKVDMVD-DPELLDLVEMEVRDLLNQYEFPGDEVPV 162
Query: 355 VPCSGLTGENLTTPSQVP--ALTSWY-SGPCLLDVIDNF 390
+ S L + W LLD ID +
Sbjct: 163 IRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEY 201
Score = 46.1 bits (109), Expect = 5e-06
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 16/90 (17%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETG 83
K +++ IGHVD GK+TL L Y+ + +D+
Sbjct: 1 KPHVNVGTIGHVDHGKTTLTAALTYVAAAEN--------------PNVEVKDYGDIDKAP 46
Query: 84 EESSCEIPVDTTSAGNPVDSE--TIIKTIG 111
EE + I ++T + + G
Sbjct: 47 EERARGITINTAHVEYETAKRHYSHVDCPG 76
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 121 bits (305), Expect = 3e-32
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 235 RGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFE 294
RGIT++ ++ T ++ D PGH D++ NMITG D +LVV A G
Sbjct: 50 RGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP---- 105
Query: 295 SGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEY 354
QTREH LL R +GV + V +NK D V S + + + ++ L + G++ +
Sbjct: 106 ---QTREHLLLARQIGVEHVVVYVNKADAVQDS-EMVELVELEIRELLTEFGYKGEETPI 161
Query: 355 VPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDNF 390
+ S L P S LLD +D +
Sbjct: 162 IVGSALCALEQRDPE-----LGLKSVQKLLDAVDTY 192
Score = 46.2 bits (109), Expect = 4e-06
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHE 62
K +++ IGHVD GK+TL + ++ + K+E
Sbjct: 1 KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYE 39
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 119 bits (300), Expect = 6e-31
Identities = 78/160 (48%), Positives = 113/160 (70%), Gaps = 5/160 (3%)
Query: 234 NRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGF 293
+G T++VG++ FET+ + +LLDAPGHK ++ NMI GA+QAD+ +LV+ A RGEFE GF
Sbjct: 85 EKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGF 144
Query: 294 ESGGQTREHALLVRSLGVNQLGVVINKLDTVS--WSQDRFQEIVTKLGAFLKQAGFRDS- 350
E GGQTREHA+L R+ G+N L VVINK+D S WS++R++E V KL FL++ +S
Sbjct: 145 ERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSK 204
Query: 351 -DIEYVPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDN 389
D++Y+P S TG+N+ ++ WY GP LL+ +D+
Sbjct: 205 TDVKYMPVSAYTGQNVKDRVD-SSVCPWYQGPSLLEYLDS 243
Score = 66.8 bits (162), Expect = 9e-13
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Query: 1 MEGKVNKDKLKKIEEYTREQAGGKGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHK 60
++ +V+++ LK + GK +++V IGHVDAGKSTL G++L+L G V R + K
Sbjct: 7 LQNEVDQELLKDMY--------GKEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEK 58
Query: 61 HETESKKLGKQSFMYAWILDETGEESSCEIPVD 93
E E+K+ GK+S+ +W LD T EE V+
Sbjct: 59 IEREAKEAGKESWYLSWALDSTSEEREKGKTVE 91
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 109 bits (274), Expect = 1e-27
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 235 RGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFE 294
+GIT+DV F T + + D PGH+ + NM TGA+ D+A+++VDA G
Sbjct: 73 QGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQT---- 128
Query: 295 SGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEY 354
QTR H+ + LG+ + V INK+D + + F+ I F + F+ + + +
Sbjct: 129 ---QTRRHSYIASLLGIKHIVVAINKMDLNGFDERVFESIKADYLKFAEGIAFKPTTMAF 185
Query: 355 VPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDNFKTPS 394
VP S L G+N+ S + WY+G L+++++ + S
Sbjct: 186 VPMSALKGDNVVNKS---ERSPWYAGQSLMEILETVEIAS 222
Score = 66.0 bits (160), Expect = 1e-12
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQ--SFMYAWILDE 81
K L + G+VD GKSTL+G LL+ + + +SKK G A ++D
Sbjct: 7 KEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDG 66
Query: 82 TGEESSCEIPVDTT 95
E I +D
Sbjct: 67 LQAEREQGITIDVA 80
>d2c78a1 b.43.3.1 (A:213-312) Elongation factor Tu (EF-Tu), domain 2
{Thermus thermophilus [TaxId: 274]}
Length = 100
Score = 87.6 bits (217), Expect = 2e-21
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 393 PSRPLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEK---VMVQPQNEVTTVKAVYV 449
P R + KP M V D++ TG G GR+E G + G++ V + P+ T V V +
Sbjct: 1 PVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEM 60
Query: 450 DEMSVSAAYAGDNVSVTLLNYDQQNVSVGFLLS 482
++ AGDNV V L ++ V G +L+
Sbjct: 61 HRKTLQEGIAGDNVGVLLRGVSREEVERGQVLA 93
>d1jnya1 b.43.3.1 (A:228-322) Elongation factor eEF-1alpha, domain 2
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 95
Score = 81.9 bits (202), Expect = 2e-19
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 396 PLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSVS 455
P+ KPLR+ + D+Y +G G GRVE+GV+ G+K++ P +V V+++ +
Sbjct: 1 PVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFMPAGKVGEVRSIETHHTKMD 60
Query: 456 AAYAGDNVSVTLLNYDQQNVSVGFLLSELSHPCPV 490
A GDN+ + +++++ G ++ ++P V
Sbjct: 61 KAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTV 95
>d1f60a1 b.43.3.1 (A:241-334) Elongation factor eEF-1alpha, domain 2
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 94
Score = 81.4 bits (201), Expect = 3e-19
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 399 KPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSVSAAY 458
KPLR+ + D+YK G G GRVETGVI G V P T VK+V + +
Sbjct: 2 KPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGV 61
Query: 459 AGDNVSVTLLNYDQQNVSVGFLLSELSHPCPV 490
GDNV + N + + G + + + P
Sbjct: 62 PGDNVGFNVKNVSVKEIRRGNVCGDAKNDPPK 93
>d1efca1 b.43.3.1 (A:205-296) Elongation factor Tu (EF-Tu), domain 2
{Escherichia coli [TaxId: 562]}
Length = 92
Score = 79.8 bits (197), Expect = 9e-19
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 397 LTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEV--TTVKAVYVDEMSV 454
+ KP + + D++ +G G + GRVE G+I GE+V + E +T V + +
Sbjct: 2 IDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLL 61
Query: 455 SAAYAGDNVSVTLLNYDQQNVSVGFLLS 482
AG+NV V L ++ + G +L+
Sbjct: 62 DEGRAGENVGVLLRGIKREEIERGQVLA 89
>d1d2ea1 b.43.3.1 (A:251-348) Elongation factor Tu (EF-Tu), domain 2
{Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Length = 98
Score = 79.1 bits (195), Expect = 2e-18
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 394 SRPLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMV--QPQNEVTTVKAVYVDE 451
+R L KP + V +Y G G + G +E G++ G++ +N T V + +
Sbjct: 1 TRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLGHSKNIRTVVTGIEMFH 60
Query: 452 MSVSAAYAGDNVSVTLLNYDQQNVSVGFLLS 482
S+ A AGDN+ + ++++ G +++
Sbjct: 61 KSLDRAEAGDNLGALVRGLKREDLRRGLVMA 91
>d1r5ba1 b.43.3.1 (A:460-554) Eukaryotic peptide chain release
factor ERF2, post-G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 95
Score = 75.6 bits (186), Expect = 2e-17
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 395 RPLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEM-S 453
R + P M ++ YK G + G++E G I V+V P N+ V A+Y +
Sbjct: 4 RKVNAPFIMPIASKYK--DLGTILEGKIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEE 61
Query: 454 VSAAYAGDNVSVTLLNYDQQNVSVGFLLSELSHP 487
+S++ GD V + + D +V G++L+ +P
Sbjct: 62 ISSSICGDQVRLRVRG-DDSDVQTGYVLTSTKNP 94
>d1wb1a1 b.43.3.1 (A:180-271) Elongation factor SelB, domains 2 and
4 {Methanococcus maripaludis [TaxId: 39152]}
Length = 92
Score = 73.1 bits (179), Expect = 2e-16
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 395 RPLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSV 454
R +M + + G+G + G + G++ G+++ V P N T V+++ + SV
Sbjct: 1 RNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQYFKESV 60
Query: 455 SAAYAGDNVSVTLLNYDQQNVSVGFLLS 482
A AGD V + + D + + G +L+
Sbjct: 61 MEAKAGDRVGMAIQGVDAKQIYRGCILT 88
>d1xe1a_ b.43.3.1 (A:) Hypothetical protein PF0907 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 91
Score = 55.2 bits (133), Expect = 3e-10
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 399 KPL-RMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSVSAA 457
KP ++ V ++ G I G VE+G+I G KV + + + + V A
Sbjct: 7 KPAGKVVVEEVVNIMG-KDVIIGTVESGMIGVGFKVKGPSG--IGGIVRIERNREKVEFA 63
Query: 458 YAGDNVSVTLLNYDQQNVSVGFLLS 482
AGD + +++ V G +L
Sbjct: 64 IAGDRIGISIEG-KIGKVKKGDVLE 87
>d1zunb1 b.43.3.1 (B:238-329) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain 2-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 92
Score = 53.4 bits (128), Expect = 1e-09
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 400 PLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSVSAAYA 459
LR V + + + AG + +G++ G++++V P + + VK++ E + A
Sbjct: 6 DLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGP 65
Query: 460 GDNVSVTLLNYDQQNVSVGFLLSELSHP 487
G V++T+ D+ ++S G LL +
Sbjct: 66 GQAVTLTM--EDEIDISRGDLLVHADNV 91
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 55.7 bits (133), Expect = 3e-09
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 236 GITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFES 295
G + I+ +DAPGH+ + M++GA D A+LVV A +
Sbjct: 71 PSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQP---- 126
Query: 296 GGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYV 355
QTREH + + +GV L +V NK+D VS + ++ F K G ++ +
Sbjct: 127 --QTREHFVALGIIGVKNLIIVQNKVDVVSK--EEALSQYRQIKQFTK--GTWAENVPII 180
Query: 356 PCSGLTGENL 365
P S L N+
Sbjct: 181 PVSALHKINI 190
Score = 48.8 bits (115), Expect = 6e-07
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 27 LHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETGEE 85
+++ V+GHVD GK+TL+ + + + E+ + T + + +
Sbjct: 9 VNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCESCKKPEAY 67
>d1kk1a1 b.43.3.1 (A:201-321) Initiation factor eIF2 gamma subunit,
domain II {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Length = 121
Score = 51.6 bits (123), Expect = 2e-08
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 23/121 (19%)
Query: 393 PSRPLTKPLRMSVSDIYK--------STGSGYCIAGRVETGVILAGEKVMVQPQNEV--- 441
P R KP +M V + G + G + G + G+++ ++P
Sbjct: 1 PKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEH 60
Query: 442 ---------TTVKAVYVDEMSVSAAYAGDNVSVTL---LNYDQQNVSVGFLLSELSHPCP 489
T + ++ V AY G V V + ++ G ++ + P
Sbjct: 61 GRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 120
Query: 490 V 490
V
Sbjct: 121 V 121
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 53.9 bits (129), Expect = 3e-08
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 235 RGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFE 294
RGIT+ + K I ++DAPGH DF + D A++V D+++G
Sbjct: 55 RGITITAAVTTCFWKDHRINIIDAPGHVDFTIEVERSMRVLDGAIVVFDSSQG------- 107
Query: 295 SGGQTREHALLVRSLGVNQLGVVINKLDTVSWS-QDRFQEIVTKLGA 340
Q+ V ++ NK+D + + +LGA
Sbjct: 108 VEPQSETVWRQAEKYKVPRI-AFANKMDKTGADLWLVIRTMQERLGA 153
Score = 43.2 bits (101), Expect = 8e-05
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGRVS-AREIHKHET 63
+ H+DAGK+T +LY GR+ E+H+
Sbjct: 10 GIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAA 44
>d1g7sa2 b.43.3.1 (A:460-587) Initiation factor IF2/eIF5b, domains 2
and 4 {Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]}
Length = 128
Score = 48.6 bits (116), Expect = 2e-07
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 397 LTKP--LRMSVSDIYKSTGSGYCIAGRVETGVILAGEKVMVQPQNEVTTVKAVYVDEMSV 454
+ KP +R+ +++ + V TGVI G +M V TV+++ ++
Sbjct: 1 IIKPASIRLIPKLVFRQSK-PAIGGVEVLTGVIRQGYPLMNDDGETVGTVESMQDKGENL 59
Query: 455 SAAYAGDNVSVTLLNYDQQNVSVG 478
+A G V++ + ++ G
Sbjct: 60 KSASRGQKVAMAI-----KDAVYG 78
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 50.0 bits (118), Expect = 2e-07
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETGEESSC 88
+ ++GHVD GK+TL L + + H E K F A I
Sbjct: 8 IGMVGHVDHGKTTLTKALTGVWT-----DTHSEELRRGITIKIGFADAEIRRCPNCGRYS 62
Query: 89 EIPVDT 94
PV
Sbjct: 63 TSPVCP 68
Score = 41.5 bits (96), Expect = 2e-04
Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 235 RGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFE 294
+ + ++ +DAPGH+ + M+ GA+ D A+LV+ A
Sbjct: 62 STSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRP--- 118
Query: 295 SGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEY 354
QTREH + ++ +G + + NK++ V ++ E ++ F++ G +
Sbjct: 119 ---QTREHLMALQIIGQKNIIIAQNKIELVDK--EKALENYRQIKEFIE--GTVAENAPI 171
Query: 355 VPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDNF 390
+P S L G N+ L+ I++F
Sbjct: 172 IPISALHGANIDV---------------LVKAIEDF 192
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 50.0 bits (118), Expect = 4e-07
Identities = 20/156 (12%), Positives = 37/156 (23%), Gaps = 25/156 (16%)
Query: 233 LNRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETG 292
L + + K L+D PG + G + + + E
Sbjct: 77 LMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEIL 136
Query: 293 FESGGQTREHALLVRSLGVNQLGV----VINKLDTVSWSQDRFQEIVTKLGAFLKQAGFR 348
+ L +LG +NK+D +S + + +L
Sbjct: 137 KK--PNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKL 194
Query: 349 D-------------------SDIEYVPCSGLTGENL 365
D + + S T E
Sbjct: 195 DPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGF 230
Score = 39.6 bits (91), Expect = 0.001
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGR 52
V +G +GK+TL G +
Sbjct: 4 VFVGTAGSGKTTLTGEFGRYLED 26
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 49.7 bits (118), Expect = 8e-07
Identities = 38/193 (19%), Positives = 58/193 (30%), Gaps = 33/193 (17%)
Query: 235 RGITMDVGQSQFETKTK----------------YITLLDAPGHKDFIPNMITGATQADVA 278
RGIT+ ++ I L+D+PGH DF + D A
Sbjct: 64 RGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGA 123
Query: 279 LLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTV-SWSQDRFQEIVTK 337
L+VVD G QT + + VVINK+D Q +++
Sbjct: 124 LVVVDTIEG-------VCVQTETVLRQALGERIKPV-VVINKVDRALLELQVSKEDLYQT 175
Query: 338 LGAFLKQAGFRDSDIEYVPCSGLTGENLTTPSQVPALTSWYSGPCLLDVIDNFKTPSRPL 397
R + V S E L PA + G L + +
Sbjct: 176 FA--------RTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRY 227
Query: 398 TKPLRMSVSDIYK 410
K + + +
Sbjct: 228 AKKFGVDKAKMMD 240
Score = 44.3 bits (104), Expect = 4e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHET 63
VI HVD GKSTL L+ G +SA + +
Sbjct: 21 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARF 54
>d1s0ua1 b.43.3.1 (A:230-347) Initiation factor eIF2 gamma subunit,
domain II {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 118
Score = 44.3 bits (104), Expect = 5e-06
Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 23/112 (20%)
Query: 395 RPLTKPLRMSVSDIYKSTG--------SGYCIAGRVETGVILAGEKVMVQPQNEV----- 441
R RM V+ + G + G + GV G+++ ++P +V
Sbjct: 1 RDPDATPRMYVARSFDINKPGTEIKDLKGGVLGGAIIQGVFKVGDEIEIRPGIKVTEGNK 60
Query: 442 -------TTVKAVYVDEMSVSAAYAGDNVSVTL---LNYDQQNVSVGFLLSE 483
T + ++ + A+ G + V + + G ++
Sbjct: 61 TFWKPLTTKIVSLAAGNTILRKAHPGGLIGVGTTLDPYLTKSDALTGSVVGL 112
>d1r5ba2 b.44.1.1 (A:555-622) Eukaryotic peptide chain release
factor ERF2, C-terminal domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 68
Score = 40.5 bits (95), Expect = 3e-05
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 490 VSSKFEARIVVFNITTPITIGYPVTHDITHLTKAAIFSEIGKQ 532
+++F A+I + + + +T GY I + F+++ +
Sbjct: 2 ATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHK 44
>d2qn6a1 b.43.3.1 (A:207-320) Initiation factor eIF2 gamma subunit,
domain II {Sulfolobus solfataricus [TaxId: 2287]}
Length = 114
Score = 41.5 bits (97), Expect = 4e-05
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 20/93 (21%)
Query: 395 RPLTKPLRMSVSDIYKSTG--------SGYCIAGRVETGVILAGEKVMVQPQNEV----- 441
R L++ M V + G I G + G+ +++ V P V
Sbjct: 1 RDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGK 60
Query: 442 -------TTVKAVYVDEMSVSAAYAGDNVSVTL 467
T + ++ + A G V++
Sbjct: 61 VSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGT 93
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 43.3 bits (101), Expect = 7e-05
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGRVSARE 57
++GH +GK+TL LLY G R
Sbjct: 6 ALVGHAGSGKTTLTEALLYKTGAKERRG 33
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 41.2 bits (95), Expect = 1e-04
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 27 LHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILD 80
++L + GH+D GK+TL L + SA + + F + +
Sbjct: 6 INLGIFGHIDHGKTTLSKVLTE-IASTSAHDKLPESQKRGITIDIGFSAFKLEN 58
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b,
N-terminal (G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 42.0 bits (97), Expect = 2e-04
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 31 VIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAW 77
V+GHVD GK+TL+ H+ + ++ +G
Sbjct: 10 VLGHVDHGKTTLLDHIRGSAVA-----SREAGGITQHIGATEIPMDV 51
Score = 34.7 bits (78), Expect = 0.029
Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 37/138 (26%)
Query: 257 DAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGV 316
D PGH+ F G AD+A+L+VD G E+ R + V
Sbjct: 76 DTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRT--------PFVV 127
Query: 317 VINKLDTVSWS-------------------QDRFQEIVTKLGAFLKQAGFRD-------- 349
NK+D + Q + V +L L + GF
Sbjct: 128 AANKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTD 187
Query: 350 --SDIEYVPCSGLTGENL 365
S + +P S +TGE +
Sbjct: 188 FASQVSIIPISAITGEGI 205
>d1f60a2 b.44.1.1 (A:335-441) Elongation factor eEF-1alpha,
C-terminal domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 107
Score = 39.8 bits (93), Expect = 2e-04
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 494 FEARIVVFNITTPITIGYPVTHDITHLTKAAIFSEI 529
F A ++V N I+ GY D A F E+
Sbjct: 4 FNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDEL 39
>d1jnya2 b.44.1.1 (A:323-429) Elongation factor eEF-1alpha,
C-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 107
Score = 36.9 bits (85), Expect = 0.001
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 494 FEARIVVFNITTPITIGYPVTHDITHLTKAAIFSEI 529
F ARI+V T + GY + + A SE+
Sbjct: 4 FTARIIVVWHPTALANGYTPVLHVHTASVACRVSEL 39
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 37.0 bits (84), Expect = 0.004
Identities = 9/68 (13%), Positives = 19/68 (27%)
Query: 24 KGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETG 83
+ + ++G + GKSTL +L + + +D G
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAG 65
Query: 84 EESSCEIP 91
+
Sbjct: 66 LRRKSRVE 73
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 35.9 bits (82), Expect = 0.009
Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 218 CLVMRIVPLEGIASALNRGITMDVGQSQFETKTKYITL--LDAPGHKDFIPNMITGATQA 275
C++ R + S I +D E K I L D G + F A
Sbjct: 21 CVLFRFS-EDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGA 79
Query: 276 DVALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIV 335
+LV D T + F++ + S V ++ ++ NK D Q +
Sbjct: 80 MGIMLVYDITNEKS---FDNIRNWIRNIEEHASADVEKM-ILGNKCDVNDKRQVSKERG- 134
Query: 336 TKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ D I+++ S N+
Sbjct: 135 --------EKLALDYGIKFMETSAKANINV 156
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 146
Score = 32.2 bits (73), Expect = 0.10
Identities = 19/133 (14%), Positives = 37/133 (27%), Gaps = 25/133 (18%)
Query: 100 PVDSETIIKTIGPHGPVPLEDTYYLDKLFHFAGERNPE---RVVHAKGGGAFGYFEDRET 156
P D + + + + G R+ + + G +F +
Sbjct: 20 PKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPS 79
Query: 157 IIKTIGPHGPVPLEDTYYLDKLFHFSGERN---PERVVHAKGGGAFGYFEV--RKLPAGV 211
+ + E+N + A GGGAF + E +
Sbjct: 80 C----------------AMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQL 123
Query: 212 VKI-EFACLVMRI 223
K+ E CL+ +
Sbjct: 124 HKLDELDCLIQGL 136
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 31.8 bits (71), Expect = 0.21
Identities = 21/149 (14%), Positives = 37/149 (24%), Gaps = 14/149 (9%)
Query: 218 CLVMRIVPLEGIAS-ALNRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQAD 276
+ R + GI V K + + D G + + A
Sbjct: 20 SFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAM 79
Query: 277 VALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVT 336
+L+ D T E + + S Q+ +V NK D +
Sbjct: 80 GFILMYDITNEESFNAVQDWSTQIKT----YSWDNAQVLLVGNKCDMEDERVVSSERG-- 133
Query: 337 KLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ E+ S N+
Sbjct: 134 -------RQLADHLGFEFFEASAKDNINV 155
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 31.7 bits (71), Expect = 0.21
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 17/150 (11%)
Query: 218 CLVMRIVPLEGIASALNRGITMDVGQSQFETKTKYITL--LDAPGHKDFIPNMITGATQA 275
CL++R V + + I +D + K + L D G + F A
Sbjct: 17 CLLVRFV-EDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGA 75
Query: 276 DVALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIV 335
+LV D T + VN+ +L V D +V
Sbjct: 76 MGIILVYDITDER-----------TFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVV 124
Query: 336 TKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
T +A ++ I ++ S +N+
Sbjct: 125 TADQG---EALAKELGIPFIESSAKNDDNV 151
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.6 bits (70), Expect = 0.27
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 30 VVIGHVDAGKSTLMGHLL 47
++G + GKSTL+ +LL
Sbjct: 9 AIVGKPNVGKSTLLNNLL 26
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 31.6 bits (70), Expect = 0.30
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 298 QTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPC 357
E +R L + + V +NKLD + Q+ + K + D ++P
Sbjct: 109 IDVEFYQFLRELDIPTI-VAVNKLDKIKNVQEVINFLAEKFEV-----PLSEIDKVFIPI 162
Query: 358 SGLTGENL 365
S G+N+
Sbjct: 163 SAKFGDNI 170
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 30.9 bits (68), Expect = 0.41
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 30 VVIGHVDAGKSTLMGHLL 47
+++G + GKSTL L+
Sbjct: 4 LIVGRPNVGKSTLFNKLV 21
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 30.9 bits (68), Expect = 0.45
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Query: 9 KLKKIEEYT----REQAGGKGRLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETE 64
K+ K E EQ G + + G + GKS+ + L ++ +T+
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINS-LINRKNLARTSSKPGKTQ 60
Query: 65 SKKLGKQSFMYAWI 78
+ + ++
Sbjct: 61 TLNFYIINDELHFV 74
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 30.3 bits (67), Expect = 0.51
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 27 LHLVVIGHVDAGKSTLMGHLL 47
L +V++G + GKSTL+ LL
Sbjct: 1 LRMVIVGKPNVGKSTLLNRLL 21
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 30.4 bits (67), Expect = 0.61
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 27 LHLVVIGHVDAGKSTLMGHLLY 48
+ L ++G +GK+T + +
Sbjct: 3 MELTLVGLQYSGKTTFVNVIAS 24
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 30.9 bits (69), Expect = 0.69
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 9/41 (21%)
Query: 7 KDKLKKIEEYTREQAGGKGRLHLVVIGHVDAGKSTLMGHLL 47
D LK+I+ L++ V G +GKS+ + L
Sbjct: 46 SDALKEID---------SSVLNVAVTGETGSGKSSFINTLR 77
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 30.1 bits (66), Expect = 0.87
Identities = 8/63 (12%), Positives = 14/63 (22%)
Query: 26 RLHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILDETGEE 85
+ + G +AGKS+ + L + L G
Sbjct: 16 GIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYA 75
Query: 86 SSC 88
Sbjct: 76 EVP 78
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 30.0 bits (66), Expect = 0.94
Identities = 12/48 (25%), Positives = 17/48 (35%)
Query: 318 INKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
L + + V ++ FLK +D C LTGE L
Sbjct: 117 AGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGL 164
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 30.0 bits (66), Expect = 1.0
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 29 LVVIGHVDAGKSTLMGHLL 47
+++ G ++GK++L+ L
Sbjct: 6 IIIAGPQNSGKTSLLTLLT 24
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.3 bits (64), Expect = 1.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 27 LHLVVIGHVDAGKSTLMGHLL 47
+ +V+ G +AGKS+L+ L
Sbjct: 2 MKVVIAGRPNAGKSSLLNALA 22
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 29.8 bits (66), Expect = 1.2
Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 7 KDKLKKIEEYTREQAGGKGRLHLVVIGHVDAGKSTLMGHLL 47
+ KL ++ +++ L ++V+G GKS+ + ++
Sbjct: 15 QTKLLELLGNLKQE--DVNSLTILVMGKGGVGKSSTVNSII 53
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.3 bits (64), Expect = 1.2
Identities = 16/130 (12%), Positives = 31/130 (23%), Gaps = 2/130 (1%)
Query: 236 GITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFES 295
T + T D GH + + + +VDA E
Sbjct: 29 QPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARV 88
Query: 296 GGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYV 355
+ + V + + + S+ + + L Q +E
Sbjct: 89 --ELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVF 146
Query: 356 PCSGLTGENL 365
CS +
Sbjct: 147 MCSVVMRNGY 156
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 190
Score = 29.6 bits (66), Expect = 1.3
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 274 QADVALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTV-SWSQDRFQ 332
+ ++ ++ ++ EF+ E ++ + I L T + +
Sbjct: 120 ENELLNIMDRMSQKEFDATVRISKYIEEKEDALKDFSNEDIIHAIEWLSTAELARDEEYL 179
Query: 333 EIVTKLGAFLK 343
E++ +LG+ LK
Sbjct: 180 ELLKRLGSILK 190
>d2dy1a1 b.43.3.1 (A:275-377) Elongation factor G (EF-G), domain II
{Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 103
Score = 28.1 bits (62), Expect = 1.5
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 6/99 (6%)
Query: 393 PSRPLTKPLRMSVSDIYKSTGSGYCIAGRVETGVILAGEKV--MVQPQNEVTTVKAVYVD 450
R P V + G R+ G + G+ + + D
Sbjct: 2 TERFGDGPPLAKVFKVQVDPFMGQVAYLRLYRGRLKPGDSLQSEAGQVRLPHLYVPMGKD 61
Query: 451 EMSVSAAYAGDNVSVTLLNYDQQNVSVGFLLSELSHPCP 489
+ V A AG + V + + G +L + P
Sbjct: 62 LLEVEEAEAGFVLGVPKA----EGLHRGMVLWQGEKPES 96
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.9 bits (63), Expect = 1.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 30 VVIGHVDAGKSTLMGHLL 47
++G + GKSTL+ LL
Sbjct: 9 AIVGRPNVGKSTLLNKLL 26
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 265
Score = 29.2 bits (65), Expect = 2.1
Identities = 29/145 (20%), Positives = 44/145 (30%), Gaps = 26/145 (17%)
Query: 579 FFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWD---FISLLPET-------------THQV 622
F V++ + + N V +R+ I + E T V
Sbjct: 100 FGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGV 159
Query: 623 MILFSDRGIPDGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAAT 682
M+ D GI + N +PV C + N P T+ +
Sbjct: 160 MVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQM-LESMTYNPRP---TRAEVS 215
Query: 683 DPDYSIRD------LYDNIAKGNFP 701
D +I D L AKGN+P
Sbjct: 216 DVGNAILDGADCVMLSGETAKGNYP 240
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 28.4 bits (62), Expect = 2.8
Identities = 19/148 (12%), Positives = 40/148 (27%), Gaps = 13/148 (8%)
Query: 218 CLVMRIVPLEGIASALNRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQADV 277
++ ++ + + + G ++ K + D G P T
Sbjct: 27 TILYKLKLGQSVTTIPTVGFNVET----VTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQG 82
Query: 278 ALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTK 337
+ VVD + Q + R + + + NK +
Sbjct: 83 LIFVVDCA---DRDRIDEARQELHRIINDREMRDAIILIFANK------QDLPDAMKPHE 133
Query: 338 LGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ L RD + P +G+ L
Sbjct: 134 IQEKLGLTRIRDRNWYVQPSCATSGDGL 161
Score = 27.2 bits (59), Expect = 7.1
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 23 GKGRLHLVVIGHVDAGKSTLMGHL 46
G + ++++G AGK+T++ L
Sbjct: 9 GNKEMRILMLGLDAAGKTTILYKL 32
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE
{Enterococcus faecalis [TaxId: 1351]}
Length = 127
Score = 27.8 bits (61), Expect = 3.1
Identities = 9/59 (15%), Positives = 19/59 (32%)
Query: 598 PVTHLRDWDAFWDFISLLPETTHQVMILFSDRGIPDGFRHMHGYGSHTFKLVNKDNEPV 656
V LRD D + +V+ + D + + Y + + D+ +
Sbjct: 51 GVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLL 109
>d1h80a_ b.80.1.8 (A:) iota-carrageenase {Alteromonas sp., atcc
43554 [TaxId: 232]}
Length = 464
Score = 28.8 bits (64), Expect = 3.1
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 345 AGFRDSDIEYVPCSGLTGEN--LTTPSQVPALTSWYSGPCLLDVIDNFKTPSR 395
A + ++Y S + L T Q Y GP L VID S+
Sbjct: 364 ADLKQDQLDYFSTSNPMCKRVCLPTKEQWSKQGQIYIGPSLAAVIDTTPETSK 416
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 28.6 bits (62), Expect = 3.4
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 30 VVIGHVDAGKSTLMGHLLY-LMGRVSAREIHKHETESKKLGKQSFMYAW 77
++IG +GKS+L+ +L L + ++I K E +
Sbjct: 27 LIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIF 75
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 3.4
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 316 VVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ NK D ++ + EI L RD + CS LTGE +
Sbjct: 122 IFANKQDLLTAAPAS--EIAEGLN----LHTIRDRVWQIQSCSALTGEGV 165
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 28.5 bits (63), Expect = 3.5
Identities = 8/50 (16%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWI 78
V++G AGK+ + + + I + L + A++
Sbjct: 29 FVILGPTGAGKTLFLELIAGFH-VPDSGRILLDGKDVTDLSPEKHDIAFV 77
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 95
Score = 26.8 bits (59), Expect = 3.5
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 835 KGPEPTPRGAWSTYNATGDVKRYKTEDEDNFSQPRILWSNVLDDAARDRMTTNIASVLK 893
K E T S ++TG+ T + D R++ + + A+ + I+ L
Sbjct: 13 KASEATVCANNSKVSSTGEKVVLWTREAD-----RVILTMCQEQGAQPHTFSVISQQLG 66
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 28.0 bits (62), Expect = 3.7
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFM 74
+ G GK+TL+ + + + EI + K+ + F
Sbjct: 30 VNFHGPNGIGKTTLLKTISTYL-KPLKGEIIYNGVPITKVKGKIFF 74
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.9 bits (61), Expect = 4.1
Identities = 23/149 (15%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 218 CLVMRIVPLEGIAS-ALNRGITMDVGQSQFETKTKYITLLDAPGHKDFIPNMITGATQAD 276
CL+ + + +A G+ + + + + D G + F + A
Sbjct: 19 CLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAA 78
Query: 277 VALLVVDATRGEFETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEIVT 336
AL+V D TR + + + ++ NK D + ++E
Sbjct: 79 GALMVYDITRRST---YNHLSSWLTD-ARNLTNPNTVIILIGNKADLEAQRDVTYEEA-- 132
Query: 337 KLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ ++ + ++ S TGEN+
Sbjct: 133 -------KQFAEENGLLFLEASAKTGENV 154
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 28.3 bits (62), Expect = 4.3
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 28 HLVVIGHVDAGKSTLMGHLL 47
+ V+G AGKS+++ + +
Sbjct: 28 QIAVVGGQSAGKSSVLENFV 47
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.6 bits (60), Expect = 4.4
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 13/121 (10%)
Query: 245 QFETKTKYITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFESGGQTREHAL 304
K + + D G + F + A ALLV D T E +
Sbjct: 48 NVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM-- 105
Query: 305 LVRSLGVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN 364
+ + + NK D + + F E +++++ ++ S LTGEN
Sbjct: 106 --LASQNIVIILCGNKKDLDADREVTFLEASRFA---------QENELMFLETSALTGEN 154
Query: 365 L 365
+
Sbjct: 155 V 155
>d1zunb2 b.44.1.1 (B:330-434) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain 3-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 105
Score = 26.9 bits (59), Expect = 4.5
Identities = 8/40 (20%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 490 VSSKFEARIVVFNITTPITIGYPVTHDITHLTKAAIFSEI 529
VS F+A +V P+ G + I
Sbjct: 2 VSDAFDAMLVWMA-EEPMLPGKKYDIKRATSYVPGSIASI 40
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 28.1 bits (61), Expect = 4.6
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHE 62
++G +GKS ++ + ++ G S +E+ E
Sbjct: 28 AIVGPNGSGKSNIIDAIKWVFGEQSKKELRASE 60
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 28.3 bits (62), Expect = 4.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 29 LVVIGHVDAGKSTLMGHLL 47
+VV+G +GKS+++ +++
Sbjct: 27 IVVVGSQSSGKSSVLENIV 45
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 339
Score = 28.3 bits (63), Expect = 4.7
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 7/46 (15%)
Query: 583 DPFRFIH-------FIHSQKRNPVTHLRDWDAFWDFISLLPETTHQ 621
D F+++ F S VT W DFI PE +
Sbjct: 156 DVFKWMQENEKVYGFTVSIHEYEVTIPTLWQTSMDFIKKNPEYLDE 201
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 293
Score = 27.9 bits (61), Expect = 4.8
Identities = 21/194 (10%), Positives = 43/194 (22%), Gaps = 16/194 (8%)
Query: 566 DGNWDLVGNNTPIFFVRDPFRFIHFIHSQKRNPVTHLRDWDAFWDFISLLPETTHQVMIL 625
D W + V DP RF I ++ L T
Sbjct: 61 DDCWAAKQRDAEGRLVPDPERFPRGIK----ALADYVHARGLKLGIYGDLGRLTCGGYPG 116
Query: 626 FSDRGIPDGFRHMHGYGSHTFKLVNKDNEPVYCKFHFRTDQGIKNISPQTATKLAATDPD 685
+ + + +G KL + + N + + +
Sbjct: 117 TTLDRVEQDAQTFAEWGVDMLKLDGCYSSGKEQAQGYPQMARALNATGRPIVYSCSWPAY 176
Query: 686 YSIRDLYDNIAKG------------NFPSWTFYIQVMTFEEAKTYRWNPFDVTKIWPQSD 733
N SW + ++ + PF W D
Sbjct: 177 QGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPD 236
Query: 734 FPLLPVGHMVLDKN 747
++ + +++
Sbjct: 237 MLIIGNFGLSYEQS 250
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 27.7 bits (60), Expect = 4.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 30 VVIGHVDAGKSTLMGHLLY 48
+ +G D+GK+ L LL
Sbjct: 4 LFVGLCDSGKTLLFVRLLT 22
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 5.0
Identities = 5/34 (14%), Positives = 8/34 (23%)
Query: 332 QEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
T + +E CS L +
Sbjct: 141 LYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGY 174
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 28.0 bits (62), Expect = 5.1
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWI 78
+V +G GKSTL+ ++ + +++ ++ E +
Sbjct: 29 VVFVGPSGCGKSTLL-RMIAGLETITSGDLFIGEKRMNDTPPAERGVGMV 77
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 28.1 bits (62), Expect = 5.2
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 14/100 (14%)
Query: 4 KVNKDKLKKIEEYTREQAGGKGRLHLV-VIGHVDAGKSTLMGHLLYLMGRVSAREIHKHE 62
N + LK + T + +V ++G GKS LM L S +
Sbjct: 16 MANPEALKILSAIT-------QPMVVVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSH 68
Query: 63 TE-----SKKLGKQSFMYAWILDETGEESSCEIPVDTTSA 97
T+ K+ +L +T E + +
Sbjct: 69 TKGIWMWCVPHPKKPGHI-LVLLDTEGLGDVEKGDNQNDS 107
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.6 bits (60), Expect = 5.4
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 27 LHLVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILD 80
+ +++ G GK+TL+ ++ + A E + K++ +
Sbjct: 1 MKIIITGEPGVGKTTLVKKIVERL-GKRAIGFWTEEVRDPETKKRTGFRIITTE 53
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS)
{Thermus thermophilus [TaxId: 274]}
Length = 425
Score = 28.0 bits (61), Expect = 5.8
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 70 KQSFMYAWILDETGEESSCEIPVDTTSAGNPVDSETIIKTIGP 112
K ++ +LDE G++ S S GN +D +++ G
Sbjct: 360 KTVLLHGLVLDEKGQKMS-------KSKGNVIDPLEMVERYGA 395
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 27.6 bits (61), Expect = 7.0
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFMYAWILD 80
++++G GK+T + + L S +I+ + K F+ D
Sbjct: 32 MILLGPSGCGKTTTLRMIAGLE-EPSRGQIYIGDKLVADPEKGIFVPPKDRD 82
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 27.3 bits (59), Expect = 7.3
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMG----RVSAREIHKHETESKKLGKQSFMYAWILDETGE 84
L GK+TL+ L+ + R + H+ + K GK S+
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 85 ESS 87
+S
Sbjct: 65 VAS 67
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 27.2 bits (60), Expect = 7.7
Identities = 6/46 (13%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Query: 29 LVVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETESKKLGKQSFM 74
+ ++G +GKSTL + ++ +
Sbjct: 32 IGIVGRSGSGKSTLTKLIQRFY-IPENGQVLIDGHDLALADPNWLR 76
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 7.9
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 17/151 (11%)
Query: 218 CLVMRIVPLEGIASALNRGITMDVGQSQFETKTKYITL--LDAPGHKDFIPNMITGATQA 275
CL++R +A + +D + + L D G + F A
Sbjct: 21 CLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDA 80
Query: 276 DVALLVVDATRGE-FETGFESGGQTREHALLVRSLGVNQLGVVINKLDTVSWSQDRFQEI 334
LL+ D T F+ + E+A +L + V V
Sbjct: 81 HALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKRED------ 134
Query: 335 VTKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ ++ + ++ S TG N+
Sbjct: 135 --------GEKLAKEYGLPFMETSAKTGLNV 157
>d1n0ua1 b.43.3.1 (A:344-481) Elongation factor 2 (eEF-2), domain II
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 138
Score = 26.6 bits (58), Expect = 7.9
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 378 YSGPCLLDVIDNFKTPSRPLTKPLRMSVSDIYKSTGSGYCIA-GRVETGVILAGEKVMVQ 436
Y GP D + + L + VS + ++ G A GRV G + +G+KV +Q
Sbjct: 14 YEGP--ADDANCIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQ 71
Query: 437 PQN 439
N
Sbjct: 72 GPN 74
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase
(IleRS) {Thermus thermophilus [TaxId: 274]}
Length = 452
Score = 27.6 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Query: 70 KQSFMYAWILDETGEESSCEIPVDTTSAGNPVDSETIIKTIGP 112
K + ILDE G++ S S GN VD II+ G
Sbjct: 387 KNVICHGLILDEKGQKMS-------KSKGNVVDPWDIIRKFGA 422
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 27.2 bits (59), Expect = 8.7
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 30 VVIGHVDAGKSTLMGHLLYLMGRVSAREIHKHETE 64
++G +GKS + +L+++G +SA+ +
Sbjct: 30 AIVGANGSGKSNIGDAILFVLGGLSAKAMRASRIS 64
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide
dehydrogenase, Sud) {Wolinella succinogenes [TaxId:
844]}
Length = 137
Score = 26.4 bits (57), Expect = 8.8
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 668 IKNISPQTATKLAATDPDYSIRDL--YDNIAKGNFPSWTFYIQVMTFEEAKTYRWNPFDV 725
+ +SP+ A KL +PD ++ D+ D + P Y + + + D
Sbjct: 22 MVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDP 81
Query: 726 TKIWP 730
K
Sbjct: 82 EKPVV 86
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 26.6 bits (57), Expect = 9.0
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 335 VTKLGAFLKQAGFRDSDIEYVPCSGLTGENL 365
+ L+ R CS +TGE+L
Sbjct: 121 CNAIQEALELDSIRSHHWRIQGCSAVTGEDL 151
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase
(IleRS) {Staphylococcus aureus [TaxId: 1280]}
Length = 450
Score = 27.2 bits (59), Expect = 9.5
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Query: 70 KQSFMYAWILDETGEESSCEIPVDTTSAGNPVDSETIIKTIGP 112
K + +++D G++ S S GN + + ++K G
Sbjct: 386 KFLLSHGFVMDGEGKKMS-------KSLGNVIVPDQVVKQKGA 421
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 26.9 bits (58), Expect = 9.9
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 22 GGKGRLHLVVIGHVDAGKSTLMGHL 46
G L ++++G AGK+T++ L
Sbjct: 13 GSNKELRILILGLDGAGKTTILYRL 37
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal
domain {Bacillus stearothermophilus [TaxId: 1422]}
Length = 323
Score = 27.2 bits (59), Expect = 10.0
Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 13/124 (10%)
Query: 610 DFI-SLLPETTHQVMILFSDRG---------IPDGFRHMHGYGSHTFKLVNKDNEPVYCK 659
D + ++L T V++LF+++G +PD G +++D E +
Sbjct: 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAI 98
Query: 660 F--HFRTDQGIKNISPQTATKLAATDPDYSIRDLYDNIAKGNFPSWTFYIQVMTFEEAKT 717
F + ++ K Y + + N + + V +
Sbjct: 99 PINDFELNGYFLFVTRNGMVKKTELK-HYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNE 157
Query: 718 YRWN 721
Sbjct: 158 LFLV 161
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.418
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,484,703
Number of extensions: 171922
Number of successful extensions: 743
Number of sequences better than 10.0: 1
Number of HSP's gapped: 681
Number of HSP's successfully gapped: 133
Length of query: 902
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 808
Effective length of database: 1,116,976
Effective search space: 902516608
Effective search space used: 902516608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.5 bits)