BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15201
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KHZ2|HBS1L_BOVIN HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1
Length = 686
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 59/78 (75%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D V+W Q+RFQEI KLG FLKQAGF++SD+ ++P SGL+GENL T S
Sbjct: 399 GVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRS 458
Query: 73 QVPALTSWYSGPCLLDVI 90
Q LT WY G CLL+ I
Sbjct: 459 QSSELTKWYKGLCLLEQI 476
>sp|Q6AXM7|HBS1L_RAT HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1
Length = 679
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D V+W Q+RFQEI KLG FLKQAGF++SD+ ++P SGL+GENLT+ S
Sbjct: 392 GVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTSRS 451
Query: 73 QVPALTSWYSGPCLLDVI 90
Q LT WY G CLL+ I
Sbjct: 452 QSSDLTKWYKGLCLLEQI 469
>sp|Q69ZS7|HBS1L_MOUSE HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2
Length = 682
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D V+W Q+RFQEI KLG FLKQAGF++SD+ ++P SGL+GENLT S
Sbjct: 395 GVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTARS 454
Query: 73 QVPALTSWYSGPCLLDVI 90
Q LT+WY G CLL+ I
Sbjct: 455 QSSDLTTWYKGMCLLEQI 472
>sp|Q9Y450|HBS1L_HUMAN HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1
Length = 684
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 59/78 (75%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D V+W Q+RFQEI KLG FLKQAGF++SD+ ++P SGL+GENL T S
Sbjct: 397 GVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRS 456
Query: 73 QVPALTSWYSGPCLLDVI 90
Q LT WY G CLL+ I
Sbjct: 457 QSSELTKWYKGLCLLEQI 474
>sp|Q5R6Y0|HBS1L_PONAB HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1
Length = 684
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/78 (60%), Positives = 59/78 (75%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D V+W Q+RFQEI KLG FLKQAGF++SD+ ++P SGL+GENL T S
Sbjct: 397 GVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRS 456
Query: 73 QVPALTSWYSGPCLLDVI 90
+ LT WY G CLL+ I
Sbjct: 457 RSSELTKWYKGLCLLEQI 474
>sp|O13354|ERF3_CANAX Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida albicans GN=SUP35 PE=3 SV=1
Length = 715
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGE 66
+ GVN++ VV+NK+D TV WS++R+QE TKLGAFLK G+ DI Y+P SG TG
Sbjct: 425 AKTQGVNKIIVVVNKMDDSTVGWSKERYQECTTKLGAFLKGIGYAKDDIIYMPVSGYTGA 484
Query: 67 NL---TTPSQVPALTSWYSGPCLLDVI 90
L P P WY GP LL+ +
Sbjct: 485 GLKDRVDPKDCP----WYDGPSLLEYL 507
>sp|Q9HGI6|ERF3_DEBHA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SUP35 PE=3 SV=4
Length = 701
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGE 66
+ GVN++ VV+NK+D TV W++DR+++ +TKLG FLK G+ DI ++P SG TG
Sbjct: 411 AKTQGVNKIIVVVNKMDDPTVGWAEDRYKDCITKLGTFLKGIGYAKDDIIFMPVSGYTGA 470
Query: 67 NL---TTPSQVPALTSWYSGPCLLDVI 90
+ P P WYSGP LL+ +
Sbjct: 471 GIKDRVNPKDCP----WYSGPSLLEFL 493
>sp|Q8LPC4|EF1A_PORYE Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1
Length = 449
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 13 GVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENL-T 69
GV Q+ V NK+D V+WSQDR++E+ ++ +LK+ G+ + + VP SG TGENL
Sbjct: 144 GVKQMIVACNKMDDKNVNWSQDRYEEVSKEMDLYLKKVGYNPAKVPKVPTSGWTGENLFE 203
Query: 70 TPSQVPALTSWYSGPCLLDVI 90
+ AL WY GPCLL+ +
Sbjct: 204 RTDKTHALGKWYKGPCLLEAL 224
>sp|Q9HGI7|ERF3_CANMA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida maltosa GN=SUP35 PE=3 SV=2
Length = 712
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGE 66
+ GVN++ VV+NK+D TV+WS++R+QE TKLG FLK G+ DI +P SG TG
Sbjct: 422 AKTQGVNKIIVVVNKMDDPTVNWSKERYQECTTKLGVFLKGIGYNKDDIINMPVSGYTGA 481
Query: 67 NL---TTPSQVPALTSWYSGPCLLDVI 90
L P P WY GP LL+ +
Sbjct: 482 GLKDRVNPKDCP----WYEGPSLLEYL 504
>sp|P23637|ERF3_OGAPI Eukaryotic peptide chain release factor GTP-binding subunit
OS=Ogataea pini GN=SUP2 PE=3 SV=1
Length = 741
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGE 66
+ GVN+L VVINK+D TV+WS++R++E TKL +LK G++ D+ ++P SG TG
Sbjct: 451 AKTQGVNKLVVVINKMDDPTVNWSKERYEECTTKLAMYLKGVGYQKGDVLFMPVSGYTGA 510
Query: 67 NLTTP-SQVPALTSWYSGPCLLDVI 90
L SQ A WY+GP LL+ +
Sbjct: 511 GLKERVSQKDA--PWYNGPSLLEYL 533
>sp|Q12WT3|EF1A_METBU Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM
6242) GN=tuf PE=3 SV=1
Length = 422
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL V INK+D +S+DR+ E+ ++ L GF+ D+ ++P S G+N+T S
Sbjct: 136 GINQLIVAINKMDAAKYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSS 195
Query: 73 QVPALTSWYSGPCLLDVI 90
A T WY+GP LL+ +
Sbjct: 196 ---ANTPWYTGPALLECL 210
>sp|A1RXW9|EF1A_THEPD Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5)
GN=tuf PE=3 SV=1
Length = 433
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV+QL V INK+DTV++S++R++EI +L L+ G++ +I ++P S G N++
Sbjct: 144 GVDQLVVAINKMDTVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVS--K 201
Query: 73 QVPALTSWYSGPCLLD 88
+ P T WY GPCL +
Sbjct: 202 RTPEKTPWYDGPCLYE 217
>sp|O74774|HBS1_SCHPO Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hbs1 PE=1 SV=4
Length = 592
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFL-KQAGFRDSDIEYVPCSGLTGENLTTP 71
G++++ V +NKLD +SWS+DRFQEI + FL K GF+ S++ +VP S ++G NL
Sbjct: 314 GISEIVVSVNKLDLMSWSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQK 373
Query: 72 SQVPALTSWYSGPCLLDVI 90
L WY GP LL +
Sbjct: 374 DS-SDLYKWYKGPTLLSAL 391
>sp|P34825|EF1A_HYPJE Elongation factor 1-alpha OS=Hypocrea jecorina GN=tef1 PE=3 SV=1
Length = 460
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+DT +W++ R+QEI+ + F+K+ GF + +VP SG G+N+ TPS
Sbjct: 145 GVKQLIVAINKMDTANWAEARYQEIIKETSNFIKKVGFNPKAVAFVPISGFNGDNMLTPS 204
Query: 73 -QVPALTSW--------YSGPCLLDVI 90
P W ++G LL+ I
Sbjct: 205 TNCPWYKGWEKETKAGKFTGKTLLEAI 231
>sp|Q2NEL1|EF1A_METST Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM
3091) GN=tuf PE=3 SV=1
Length = 413
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL + INK+D V +S+D+F E+ +LGA + GF+ SD+ ++P S G+N++ S
Sbjct: 127 GINQLIIAINKMDVVDYSEDKFNELKEELGALISTVGFKPSDVPFIPVSAFEGDNISEKS 186
Query: 73 QVPALTSWYSGPCLL 87
+ T WY G L+
Sbjct: 187 ---SNTPWYKGNTLV 198
>sp|Q8PUR8|EF1A_METMA Elongation factor 1-alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=tuf PE=3 SV=1
Length = 422
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL V INK+D V +S+ R++E+V ++ LK GF+ S+I ++P S G+N+ S
Sbjct: 137 GINQLIVAINKMDAVDYSEARYKEVVEQVSGILKMIGFKPSEIPFIPTSAFHGDNIMKLS 196
Query: 73 QVPALTSWYSGPCLLDVI 90
T WY GP +++ +
Sbjct: 197 DK---TPWYKGPAIMEAL 211
>sp|Q8TRC4|EF1A_METAC Elongation factor 1-alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tuf PE=3
SV=1
Length = 422
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL + INK+D V +S+ +++E+V ++ LK GF+ ++I ++P S G+N+T S
Sbjct: 137 GINQLIIAINKMDAVEYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNITKLS 196
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY GP ++ +
Sbjct: 197 EK---TPWYKGPVIMQAL 211
>sp|Q96WZ1|EF1A_COCIM Elongation factor 1-alpha OS=Coccidioides immitis (strain RS)
GN=TEF PE=2 SV=2
Length = 460
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+D+ +WS+ RF EIV ++ F+K+ G+ + +VP SG G+N+ PS
Sbjct: 145 GVKQLIVAINKMDSTNWSEPRFNEIVKEVSNFIKKVGYNPKAVPFVPISGFEGDNMIQPS 204
Query: 73 -QVPALTSW--------YSGPCLLDVI 90
P W +SG LLD I
Sbjct: 205 TNAPWYKGWNKETASGKHSGKTLLDAI 231
>sp|P32769|HBS1_YEAST Elongation factor 1 alpha-like protein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HBS1 PE=1 SV=2
Length = 611
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G++ L + +NK+D V WSQ RF+EI +KL +L GF + +I +VP SG +GE +
Sbjct: 304 GIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKIE 363
Query: 73 QVPALTSWYSGPCLLDVI 90
+ WY+GP L+ +
Sbjct: 364 YTDEVRQWYNGPNLMSTL 381
>sp|P31018|EF1A_ENTHI Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1
Length = 430
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV Q+ V +NK+D + + Q+R++EI ++ AFLK+ G+ I +VP SG G+N+ PS
Sbjct: 144 GVKQMIVGVNKMDAIQYKQERYEEIKKEISAFLKKTGYNPDKIPFVPISGFQGDNMIEPS 203
Query: 73 -QVPALTSWYSGPCLL 87
+P WY GP L+
Sbjct: 204 TNMP----WYKGPTLI 215
>sp|P40911|EF1A_AJECG Elongation factor 1-alpha OS=Ajellomyces capsulata (strain G186AR /
H82 / ATCC MYA-2454 / RMSCC 2432) GN=TEF PE=2 SV=1
Length = 460
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+DT WS+ RF EI+ ++ F+K+ G+ + +VP SG G+N+ PS
Sbjct: 145 GVRQLIVAINKMDTTKWSESRFNEIIKEVSNFIKKVGYNPKAVPFVPISGFEGDNMIEPS 204
Query: 73 QVPALTSWYSG 83
P T WY G
Sbjct: 205 --PNCT-WYKG 212
>sp|Q01372|EF1A_NEUCR Elongation factor 1-alpha OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tef-1
PE=3 SV=2
Length = 460
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+DT WSQ RF+EI+ + F+K+ G+ + + +VP SG G+N+ PS
Sbjct: 145 GVKQLIVAINKMDTTQWSQTRFEEIIKETKNFIKKVGYNPAGVAFVPISGFNGDNMLEPS 204
Query: 73 QVPALTSWYSG 83
WY G
Sbjct: 205 ---TNCPWYKG 212
>sp|Q10119|EF1A2_SCHPO Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=tef1b PE=1 SV=1
Length = 460
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTP- 71
GV QL V +NK+DT WSQ RF+EIV + F+K+ GF + +VP SG G+N+ P
Sbjct: 144 GVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPT 203
Query: 72 SQVPALTSWYSG 83
+ +P WY G
Sbjct: 204 TNMP----WYQG 211
>sp|P50522|EF1A1_SCHPO Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=tef1a PE=1 SV=2
Length = 460
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTP- 71
GV QL V +NK+DT WSQ RF+EIV + F+K+ GF + +VP SG G+N+ P
Sbjct: 144 GVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPT 203
Query: 72 SQVPALTSWYSG 83
+ +P WY G
Sbjct: 204 TNMP----WYQG 211
>sp|A3DMQ1|EF1A_STAMF Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1
Length = 438
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 13 GVNQLGVVINKLDTVS--WSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTT 70
G+NQL V +NK+D WSQ R+++I T LG FLK G+ S + ++P S TG+NL
Sbjct: 144 GINQLIVAVNKMDATEPPWSQKRYEQIKTILGKFLKSLGYDISKVPFIPVSAWTGDNLIE 203
Query: 71 PSQVPALTSWYSGPCLLDVI 90
S P + WY+GP L++ +
Sbjct: 204 RS--PNM-PWYNGPTLVEAL 220
>sp|Q464Z4|EF1A_METBF Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=tuf PE=3 SV=1
Length = 422
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL V INK+D V +S+ R++E+V ++ LK GF+ DI +VP S G+N+ S
Sbjct: 137 GINQLIVAINKMDAVEYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHS 196
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY G +++ +
Sbjct: 197 EK---TPWYKGVTMMEAL 211
>sp|O27132|EF1A_METTH Elongation factor 1-alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=tuf PE=3 SV=1
Length = 413
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL V INK+D V++ +++F + ++ A +K G++ SD+E++P S G+N+T+ S
Sbjct: 127 GINQLIVAINKMDLVNYDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSKS 186
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY G L++ +
Sbjct: 187 EN---TPWYKGKTLVEAL 201
>sp|P41745|EF1A_BLAAD Elongation factor 1-alpha OS=Blastobotrys adeninivorans GN=TEF PE=3
SV=1
Length = 459
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+D+V+WS+DR+ EIV + F+K+ GF + +VP SG G+N+
Sbjct: 144 GVRQLIVAINKMDSVNWSEDRYNEIVKETSNFIKKVGFNPKAVPFVPISGWNGDNMI--- 200
Query: 73 QVPALTSWYSG 83
+ SWY G
Sbjct: 201 EATTNASWYKG 211
>sp|A4WKK8|EF1A_PYRAR Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=tuf PE=3 SV=1
Length = 444
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+ QL V +NK+D V++ Q R++++ +++ LK G+ S I +VP S + G+N+ T S
Sbjct: 154 GIQQLVVAVNKMDVVNYDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKS 213
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY+GP LL+V+
Sbjct: 214 ---SNTPWYNGPTLLEVL 228
>sp|P50256|EF1AC_PORPU Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1
Length = 449
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 13 GVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTT 70
GV Q+ V NK+D V+WS++R++E+ ++ +LK+ G+ + VP SG TGENL
Sbjct: 144 GVKQMIVACNKMDDKNVNWSKERYEEVSKEMDLYLKKVGYNPPKVPKVPTSGWTGENLFE 203
Query: 71 PSQVP-ALTSWYSGPCLLDVI 90
+ AL WY GPCLL+ +
Sbjct: 204 RTGGDHALGKWYKGPCLLEAL 224
>sp|P14865|EF1A3_MUCCL Elongation factor 1-alpha OS=Mucor circinelloides f. lusitanicus
GN=TEF-3 PE=3 SV=1
Length = 457
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN-LTTP 71
GV QL V INK+DT WSQDR+ EIV ++ F+K+ GF + +VP SG G+N L
Sbjct: 144 GVRQLIVAINKMDTTKWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDES 203
Query: 72 SQVPALTSW 80
+ +P W
Sbjct: 204 TNMPWFKGW 212
>sp|A3CTG3|EF1A_METMJ Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1
Length = 425
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+NQL + INK+D + + R+ E+ +L LK G++ DI ++P S G+N+ S
Sbjct: 137 GINQLIIGINKMDAAKYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKKS 196
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY GP +LD +
Sbjct: 197 EN---TPWYKGPTVLDAL 211
>sp|Q8R050|ERF3A_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Mus musculus GN=Gspt1 PE=1 SV=2
Length = 636
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFR-DSDIEYVPCSGLTG 65
+ +GV L V+INK+D TV+WS +R++E KL FLK+ GF DI ++PCSGLTG
Sbjct: 344 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG 403
Query: 66 ENLTTPSQVPALTSWYSG 83
NL S WY G
Sbjct: 404 ANLKEQSD---FCPWYIG 418
>sp|P15170|ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Homo sapiens GN=GSPT1 PE=1 SV=1
Length = 499
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFR-DSDIEYVPCSGLTG 65
+ +GV L V+INK+D TV+WS +R++E KL FLK+ GF DI ++PCSGLTG
Sbjct: 207 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG 266
Query: 66 ENLTTPSQVPALTSWYSG 83
NL S WY G
Sbjct: 267 ANLKEQSD---FCPWYIG 281
>sp|O93729|EF1A_PYRAE Elongation factor 1-alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tuf
PE=3 SV=1
Length = 444
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV Q+ V +NK+D V++ Q R++++ ++ LK G+ S I ++P S + G+N+ T S
Sbjct: 154 GVQQIVVAVNKMDVVNYDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKS 213
Query: 73 QVPALTSWYSGPCLLDV 89
+ T WY+GP LL+V
Sbjct: 214 ---SNTPWYTGPTLLEV 227
>sp|Q00080|EF1A_PLAFK Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 /
Thailand) GN=MEF-1 PE=3 SV=1
Length = 443
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV Q+ V +NK+DTV +S+DR++EI ++ +LK+ G++ ++++P SG G+NL S
Sbjct: 144 GVKQIVVGVNKMDTVKYSEDRYEEIKKEVKDYLKKVGYQADKVDFIPISGFEGDNLIEKS 203
Query: 73 QVPALTSWYSGPCLLDVI 90
T WY G L++ +
Sbjct: 204 DK---TPWYKGRTLIEAL 218
>sp|A3MV69|EF1A_PYRCJ Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=tuf PE=3 SV=1
Length = 444
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
G+ QL V +NK+D V++ Q R++++ ++ LK G+ S I +VP S + G+N+ T S
Sbjct: 154 GIQQLVVAVNKMDAVNYDQKRYEQVKAEVSKLLKLLGYDPSKIHFVPVSAIKGDNVRTKS 213
Query: 73 QVPALTSWYSGPCLLDVI 90
T WY GP LL+V+
Sbjct: 214 PN---TPWYQGPTLLEVL 228
>sp|Q00251|EF1A_AURPU Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3
SV=1
Length = 459
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V INK+DT WS+ R+QEI+ + F+K+ G+ + +VP SG G+N+
Sbjct: 144 GVKQLIVAINKMDTTKWSEARYQEIIKETSGFIKKVGYNPKHVPFVPISGFNGDNMI--- 200
Query: 73 QVPALTSWYSG 83
+V + WY G
Sbjct: 201 EVSSNCPWYKG 211
>sp|O74718|ERF3_SCHPO Eukaryotic peptide chain release factor GTP-binding subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sup35 PE=1 SV=2
Length = 662
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 13 GVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQ-AGFRD-SDIEYVPCSGLTGENL 68
G+N L VVINK+D +V WS++R++E V KL FL++ AG+ +D++Y+P S TG+N+
Sbjct: 375 GINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNV 434
Query: 69 TTPSQVPALTSWYSGPCLLDVI 90
++ WY GP LL+ +
Sbjct: 435 KDRVD-SSVCPWYQGPSLLEYL 455
>sp|Q8IYD1|ERF3B_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Homo sapiens GN=GSPT2 PE=1 SV=2
Length = 628
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFR-DSDIEYVPCSGLTG 65
+ +GV L V+INK+D TV+WS +R++E KL FLK+ GF DI ++PCSGLTG
Sbjct: 336 AKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTG 395
Query: 66 ENLTTPSQVPALTSWYSG 83
N+ S WY+G
Sbjct: 396 ANIKEQSD---FCPWYTG 410
>sp|Q9Y713|EF1A_ASPOR Elongation factor 1-alpha OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=tef1 PE=3 SV=1
Length = 460
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+DT WSQDR+ EIV + F+K+ G+ + +VP SG G+N+ S
Sbjct: 145 GVRQLIVALNKMDTCKWSQDRYNEIVKETSNFIKKVGYNPKSVPFVPISGFNGDNMIEAS 204
Query: 73 QVPALTSWYSG 83
WY G
Sbjct: 205 ---TNCPWYKG 212
>sp|P14864|EF1A2_MUCCL Elongation factor 1-alpha OS=Mucor circinelloides f. lusitanicus
GN=TEF-2 PE=3 SV=1
Length = 458
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN-LTTP 71
G QL V INK+DT WSQDR+ EIV ++ F+K+ GF + +VP SG G+N L
Sbjct: 144 GFRQLIVAINKMDTTKWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDES 203
Query: 72 SQVPALTSW 80
+ +P W
Sbjct: 204 TNMPWFKGW 212
>sp|P06805|EF1A1_MUCCL Elongation factor 1-alpha OS=Mucor circinelloides f. lusitanicus
GN=TEF-1 PE=3 SV=1
Length = 458
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN-LTTP 71
G QL V INK+DT WSQDR+ EIV ++ F+K+ GF + +VP SG G+N L
Sbjct: 144 GFRQLIVAINKMDTTKWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDES 203
Query: 72 SQVPALTSW 80
+ +P W
Sbjct: 204 TNMPWFKGW 212
>sp|Q5R4B3|ERF3B_PONAB Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Pongo abelii GN=GSPT2 PE=2 SV=1
Length = 628
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 9 SAVSGVNQLGVVINKLD--TVSWSQDRFQEIVTKLGAFLKQAGFR-DSDIEYVPCSGLTG 65
+ +GV L V+INK+D TV+WS +R++E KL FLK+ GF DI ++PCSGLTG
Sbjct: 336 AKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTG 395
Query: 66 ENLTTPSQVPALTSWYSG 83
N+ S WY+G
Sbjct: 396 ANVKEQSD---FCPWYTG 410
>sp|Q09069|EF1A_SORMA Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1
Length = 460
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN-LTTP 71
GV QL V INK+DT WSQ RF+EI+ + F+K+ G+ + + +VP SG G+N L
Sbjct: 145 GVKQLIVAINKMDTTQWSQARFEEIIKETKNFIKKVGYNPATVAFVPISGFNGDNMLEAS 204
Query: 72 SQVPALTSWYSG 83
+ P WY G
Sbjct: 205 TNCP----WYKG 212
>sp|O42820|EF1A_SCHCO Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3
SV=1
Length = 460
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+DT WS+DRF EIV + F+K+ G+ + +VP SG G+N+ S
Sbjct: 144 GVRQLIVAVNKMDTTKWSEDRFNEIVKETSTFIKKVGYNPKTVAFVPISGWHGDNMLEES 203
Query: 73 -QVPALTSWYSG 83
+P WY G
Sbjct: 204 TNMP----WYKG 211
>sp|A1RRJ3|EF1A_PYRIL Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=tuf PE=3 SV=1
Length = 444
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV Q+ V +NK+D V++ Q R+++I ++ LK G+ S I ++P S + G+N+ T S
Sbjct: 154 GVQQIVVAVNKMDIVNYDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKS 213
Query: 73 QVPALTSWYSGPCLLDVI 90
+ T WY+GP LL+ +
Sbjct: 214 ---SNTPWYNGPTLLEAL 228
>sp|P0CY35|EF1A1_CANAL Elongation factor 1-alpha 1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TEF1 PE=3 SV=1
Length = 458
Score = 65.5 bits (158), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+D+V W ++RF+EI+ + F+K+ G+ + +VP SG G+N+ PS
Sbjct: 144 GVKQLIVAVNKMDSVKWDKNRFEEIIKETSNFVKKVGYNPKTVPFVPISGWNGDNMIEPS 203
Query: 73 QVPALTSWYSG 83
WY G
Sbjct: 204 ---TNCPWYKG 211
>sp|Q9HDF6|EF1A_PIRIN Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2
SV=1
Length = 462
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGENLTTPS 72
GV QL V +NK+DT +WS+ RF EIV + F+K+ G+ + +VP SG G+N+ PS
Sbjct: 144 GVRQLIVAVNKMDTTNWSEARFNEIVKETSNFIKKVGYNPKTVAFVPISGWHGDNMLEPS 203
Query: 73 -QVPALTSWYSG 83
+P WY G
Sbjct: 204 TNMP----WYKG 211
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1
Length = 458
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 13 GVNQLGVVINKLDTVSWSQDRFQEIVTKLGAFLKQAGFRDSDIEYVPCSGLTGEN-LTTP 71
GV QL V INK+D+ WS+ RF EI+ ++ F+K+ GF + +VP SG G+N L
Sbjct: 144 GVRQLIVAINKMDSTKWSEQRFNEIIKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLEES 203
Query: 72 SQVPALTSW--------YSGPCLLDVI 90
+ +P W SG LLD I
Sbjct: 204 TNMPWYKGWNKETKAGAKSGKTLLDAI 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,655,271
Number of Sequences: 539616
Number of extensions: 1408272
Number of successful extensions: 3716
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 311
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)