BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15204
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y450|HBS1L_HUMAN HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1
Length = 684
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 65/81 (80%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H Q+++E AVI RL+S ++K++GEV +KKP+ LTK +A V ++T RP+ +ELY+D KE
Sbjct: 602 LHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKE 661
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRFMLR G TIAAG++T++
Sbjct: 662 LGRFMLRYGGSTIAAGVVTEI 682
>sp|Q5R6Y0|HBS1L_PONAB HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1
Length = 684
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 65/81 (80%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H Q+++E AVI RL+S ++K++GEV +KKP+ LTK +A V ++T RP+ +ELY+D KE
Sbjct: 602 LHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKE 661
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRFMLR G TIAAG++T++
Sbjct: 662 LGRFMLRYGGSTIAAGVVTEM 682
>sp|Q2KHZ2|HBS1L_BOVIN HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1
Length = 686
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 66/81 (81%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H Q+++E AVI RL+S ++K++GEV +KKP+ LTK +A V ++T RP+ +ELY+D KE
Sbjct: 604 LHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKE 663
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRFMLR SG TIAAG++T++
Sbjct: 664 LGRFMLRYSGSTIAAGVVTEI 684
>sp|Q6AXM7|HBS1L_RAT HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1
Length = 679
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 69/92 (75%)
Query: 127 QVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRP 186
+V K V +H Q+++E AVI RL+S ++K++GEV +KKP+ LTK +A V ++T RP
Sbjct: 586 EVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRP 645
Query: 187 MCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
+ +ELY+D KELGRFMLR G T+AAG++T++
Sbjct: 646 VALELYKDFKELGRFMLRYGGSTVAAGVVTEI 677
>sp|Q69ZS7|HBS1L_MOUSE HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2
Length = 682
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 69/92 (75%)
Query: 127 QVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRP 186
+V K V +H Q+++E AVI RL+S ++K++GEV +KKP+ LTK +A V ++T RP
Sbjct: 589 EVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRP 648
Query: 187 MCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
+ +ELY+D KELGRFMLR G T+AAG++T++
Sbjct: 649 VALELYKDFKELGRFMLRYGGSTVAAGVVTEI 680
>sp|Q9HGI8|ERF3_KLULA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SUP35
PE=3 SV=1
Length = 700
Score = 70.9 bits (172), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 105 TSP-TPDQEPSR---SVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTS 160
TSP P + +R + +V+L ++ GF MH + E +TRLL ++ K S
Sbjct: 584 TSPKNPVKNVTRFVAQIAIVELKSIMSAGF----SCVMHIHTAIEEVTVTRLLHKLEKGS 639
Query: 161 GEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKVI 219
+K P K M VIET P+CVE Y D +LGRF LR G TIA G I K++
Sbjct: 640 NRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKIL 698
>sp|Q9HGI4|ERF3_ZYGRO Eukaryotic peptide chain release factor GTP-binding subunit
OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2
Length = 662
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 117 VKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMS 176
V +V+L ++ GF MH + E IT+LL ++ + + +K P K M
Sbjct: 563 VAIVELKSILSSGF----SCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMK 618
Query: 177 AQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKVI 219
V+ET RP+CVE Y+D +LGRF LR G TIA G I K+I
Sbjct: 619 IIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKII 661
>sp|P05453|ERF3_YEAST Eukaryotic peptide chain release factor GTP-binding subunit
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUP35 PE=1 SV=1
Length = 685
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 117 VKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMS 176
+ +V+L ++ GF MH + E I +LL ++ K + +K P K M
Sbjct: 586 IAIVELKSIIAAGF----SCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMK 641
Query: 177 AQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
V+ET P+CVE Y+D +LGRF LR G TIA G I K+
Sbjct: 642 VIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683
>sp|P23637|ERF3_OGAPI Eukaryotic peptide chain release factor GTP-binding subunit
OS=Ogataea pini GN=SUP2 PE=3 SV=1
Length = 741
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 117 VKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMS 176
+ +V+L ++ GF MH + E T+LL + K + +K P + M
Sbjct: 643 IAIVELKSILSTGF----SCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMK 698
Query: 177 AQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKVI 219
V+ET P+C+E Y D +LGRF LR G TIA G +TK++
Sbjct: 699 IIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKVTKLL 741
>sp|Q9HGI7|ERF3_CANMA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida maltosa GN=SUP35 PE=3 SV=2
Length = 712
Score = 57.8 bits (138), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 98 SPATPTCTSPTPDQEPSRSVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVH 157
SP P T + + + +V+L ++ GF MH + E L ++
Sbjct: 599 SPKNPVKTVTKFEAQ----IAIVELKSILSNGF----SCVMHLHTAIEEVKFVELKHKLE 650
Query: 158 KTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITK 217
K + +K P K M ++E P+C E Y+D +LGRF LR G TIA G ITK
Sbjct: 651 KGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKITK 710
Query: 218 VI 219
++
Sbjct: 711 LL 712
>sp|A0RUM4|EF1A_CENSY Elongation factor 1-alpha OS=Cenarchaeum symbiosum (strain A)
GN=tuf PE=3 SV=1
Length = 436
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + +A+++ +S+++ +G V + P+ L SA + I VRP +E +++ E
Sbjct: 350 MHCHTAQVAAIMSEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPE 409
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
+GRF LR G TIAAG++ ++
Sbjct: 410 MGRFALRDMGATIAAGIVKEI 430
>sp|Q9HGI6|ERF3_DEBHA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SUP35 PE=3 SV=4
Length = 701
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 117 VKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMS 176
+ +V+L ++ GF MH + E L ++ K + +K P K M
Sbjct: 603 IAIVELKSILSNGF----SCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMK 658
Query: 177 AQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKVI 219
++ET +C E Y D +LGRF LR G TIA G ITKV+
Sbjct: 659 VIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKVL 701
>sp|O74718|ERF3_SCHPO Eukaryotic peptide chain release factor GTP-binding subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sup35 PE=1 SV=2
Length = 662
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + E +LL ++ KT+ + +K P TK M +ET P+C+E + D +
Sbjct: 581 MHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQY 639
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G T+A G + K++
Sbjct: 640 MGRFTLRDQGTTVAVGKVVKIL 661
>sp|Q149F3|ERF3B_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Mus musculus GN=Gspt2 PE=1 SV=1
Length = 632
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + E IT L+S V K SGE + +PR + + + T +C+E ++D +
Sbjct: 547 LHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQ 606
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G TIA G + K++
Sbjct: 607 MGRFTLRDEGKTIAIGKVLKLV 628
>sp|Q5R4B3|ERF3B_PONAB Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Pongo abelii GN=GSPT2 PE=2 SV=1
Length = 628
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + E IT L+S V K SGE + +PR + + + T +C+E ++D +
Sbjct: 543 LHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQ 602
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G TIA G + K++
Sbjct: 603 MGRFTLRDEGKTIAIGKVLKLV 624
>sp|Q8IYD1|ERF3B_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Homo sapiens GN=GSPT2 PE=1 SV=2
Length = 628
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + E IT L+S V K SGE + +PR + + + T +C+E ++D +
Sbjct: 543 LHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQ 602
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G TIA G + K++
Sbjct: 603 MGRFTLRDEGKTIAIGKVLKLV 624
>sp|Q8R050|ERF3A_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Mus musculus GN=Gspt1 PE=1 SV=2
Length = 636
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + E IT L+ V K SGE + +PR + + + T +C+E ++D +
Sbjct: 551 LHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQ 610
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G TIA G + K++
Sbjct: 611 MGRFTLRDEGKTIAIGKVLKLV 632
>sp|P15170|ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Homo sapiens GN=GSPT1 PE=1 SV=1
Length = 499
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + E IT L+ V K SGE + +PR + + + T +C+E ++D +
Sbjct: 414 LHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQ 473
Query: 198 LGRFMLRVSGVTIAAGLITKVI 219
+GRF LR G TIA G + K++
Sbjct: 474 MGRFTLRDEGKTIAIGKVLKLV 495
>sp|A2BN41|EF1A_HYPBU Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=tuf PE=3 SV=1
Length = 440
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + +A IT + +++ +G+VI K P+ L +A V + ++PM +E Y + +
Sbjct: 349 IHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQ 408
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G TI G++ V
Sbjct: 409 LGRFAMRDMGKTIGIGIVVDV 429
>sp|O13354|ERF3_CANAX Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida albicans GN=SUP35 PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 105 TSP-TPDQEPSR---SVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTS 160
TSP P + +R + +V+L ++ GF MH + E L ++ K +
Sbjct: 601 TSPKNPVKTVTRFEAQIAIVELKSILSNGF----SCVMHLHTAIEEVKFIELKHKLEKGT 656
Query: 161 GEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKVI 219
+K P K M ++E +C E Y+D +LGRF LR G TIA G ITK++
Sbjct: 657 NRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKITKLL 715
>sp|Q57770|EF1A_METJA Elongation factor 1-alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=tuf PE=3 SV=1
Length = 428
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
H + + LL ++ +G+VI + P+ L +A V I+ +PM +E R++ +
Sbjct: 343 FHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQ 402
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+TIAAG+ V
Sbjct: 403 LGRFAIRDMGMTIAAGMAIDV 423
>sp|B6YVG2|EF1A_THEON Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1)
GN=tuf PE=3 SV=1
Length = 428
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H +L + +LL+++ +G V+ + P+ + SA VV+ +PM +E +++ +
Sbjct: 344 LHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
+GRF +R G T+AAG++ +
Sbjct: 404 MGRFAIRDMGQTVAAGMVISI 424
>sp|P17197|EF1A_THECE Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1
Length = 428
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H +L + +LL+++ +G ++ + P+ + SA VV+ +PM +E +++ +
Sbjct: 344 LHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
+GRF +R G T+AAG++ +
Sbjct: 404 MGRFAIRDMGQTVAAGMVISI 424
>sp|A4WKK8|EF1A_PYRAR Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=tuf PE=3 SV=1
Length = 444
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + IT L+S++ +G+ + +KP+ + + A V I+ ++P+ E + D
Sbjct: 356 MHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPP 415
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF LR G TIAAG I +V
Sbjct: 416 LGRFALRDMGRTIAAGQILEV 436
>sp|O93729|EF1A_PYRAE Elongation factor 1-alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tuf
PE=3 SV=1
Length = 444
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + IT L+S++ +G+ + +KP+ + + A V I+ ++P+ E + D
Sbjct: 356 MHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPP 415
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF LR G TIAAG I +V
Sbjct: 416 LGRFALRDMGRTIAAGQILEV 436
>sp|A8MAJ1|EF1A_CALMQ Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=tuf PE=3
SV=1
Length = 444
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + I L+S++ +G+ + +KP+ + + A V ++ ++P+ VE + D+
Sbjct: 355 MHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPA 414
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF LR G T+AAG I ++
Sbjct: 415 LGRFSLRDMGRTVAAGQIIEI 435
>sp|C6A4R7|EF1A_THESM Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=tuf PE=3 SV=1
Length = 428
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + +LL+++ +G V+ + P+ + SA VV+ +PM +E +++ +
Sbjct: 344 LHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G T+AAG++ +
Sbjct: 404 LGRFAIRDMGQTVAAGMVISI 424
>sp|A3MV69|EF1A_PYRCJ Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=tuf PE=3 SV=1
Length = 444
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + I L+S++ +G+ + +KP+ + + A V I+ ++P+ E + D
Sbjct: 356 MHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPP 415
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF LR G TIAAG I +V
Sbjct: 416 LGRFALRDMGRTIAAGQILEV 436
>sp|Q8TYP6|EF1A_METKA Elongation factor 1-alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=tuf PE=3 SV=1
Length = 423
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 151 RLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTI 210
L+ ++ +GEVI + P L +A+V I +PM +E + +LGRF +R G T+
Sbjct: 352 ELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTV 411
Query: 211 AAGLITKV 218
AAG+ K+
Sbjct: 412 AAGMCVKI 419
>sp|O59153|EF1A_PYRHO Elongation factor 1-alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=tuf PE=3 SV=1
Length = 428
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + ++L++V +G ++ + P+ + SA VV+ ++P+ +E +++ +
Sbjct: 344 LHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+TIAAG++ +
Sbjct: 404 LGRFAIRDMGMTIAAGMVISI 424
>sp|Q12WT3|EF1A_METBU Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM
6242) GN=tuf PE=3 SV=1
Length = 422
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 160 SGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
SG+V + P + +A V I+ RPMC+E ++ +LGRF +R G+TIAAG+ V
Sbjct: 360 SGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSV 418
>sp|A8ABM5|EF1A_IGNH4 Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1
Length = 442
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + ++ I + ++ +G+VI + P L +A VV + ++PM +E +++ +
Sbjct: 351 IHAHTASVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQP 410
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G T+ G++T V
Sbjct: 411 LGRFAMRDMGKTVGIGIVTDV 431
>sp|P35021|EF1A_SULSO Elongation factor 1-alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=tuf PE=1 SV=3
Length = 435
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + + ++ L+S++ +G+ K P+ L + A V + ++P+CVE Y +
Sbjct: 347 IHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPP 406
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G T+ G+I V
Sbjct: 407 LGRFAMRDMGKTVGVGIIVDV 427
>sp|P90519|EF1A_CRYPV Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1
Length = 435
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 152 LLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIA 211
+ +++ K SG+V+ + P+ + +A VV++ ++P+CVE + D LGRF +R T+A
Sbjct: 359 ITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVA 418
Query: 212 AGLITKV 218
G+I V
Sbjct: 419 VGVIKSV 425
>sp|A2STF0|EF1A_METLZ Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 102 PTCTSPTPDQEPSRSVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSG 161
P PT +E + V +++ +V VG+ H + + + T L ++ SG
Sbjct: 307 PIENPPTVAEEFTAQVVVLQHPSVLSVGYTPVF----HCHTSQTACMFTELNKKLDPRSG 362
Query: 162 EVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
+V + P L +A I RP+ +E +++ +LGRF +R G+T+AAGL+ V
Sbjct: 363 QVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSV 419
>sp|P54959|EF1A_BLAHO Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1
Length = 434
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 151 RLLSQVHKTSGEVIRKKPRALT--KSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGV 208
+++S++ K +G+V+R+ P + KSM AQ+V +PMCVE + D LGRF +R
Sbjct: 363 KIMSEMDKRTGKVLRENPDIVKNGKSMMAQLV--PSKPMCVETFSDYPPLGRFAVRDMRQ 420
Query: 209 TIAAGLI 215
T+A G+I
Sbjct: 421 TVAVGII 427
>sp|Q00080|EF1A_PLAFK Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 /
Thailand) GN=MEF-1 PE=3 SV=1
Length = 443
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 154 SQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAG 213
S++ K SG+V+ + P+A+ SA V +E +PM VE + + LGRF +R TIA G
Sbjct: 363 SKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLGRFAIRDMRQTIAVG 422
Query: 214 LITKVIFDQCGS 225
+I ++ G+
Sbjct: 423 IINQLKRKNLGA 434
>sp|P41203|EF1A_DESMO Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3
SV=1
Length = 438
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + + IT +++++ +G+ I K P L + A V + ++P+ VE Y D +
Sbjct: 349 IHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQG 408
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G TI G + ++
Sbjct: 409 LGRFAMRDMGKTIGIGQVLEI 429
>sp|A1RXW9|EF1A_THEPD Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5)
GN=tuf PE=3 SV=1
Length = 433
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + LL ++ +G V +KP+ + + SA V + +P+ VE Y +
Sbjct: 347 LHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPP 406
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R SG TIAAG++ V
Sbjct: 407 LGRFAIRDSGRTIAAGVVIDV 427
>sp|A1RRJ3|EF1A_PYRIL Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=tuf PE=3 SV=1
Length = 444
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
MH + I L+S++ +G+ + +KP+ + + A V I+ ++P+ E + +
Sbjct: 356 MHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPA 415
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF LR G TIAAG I +V
Sbjct: 416 LGRFALRDMGRTIAAGQIIEV 436
>sp|Q9V0V7|EF1A_PYRAB Elongation factor 1-alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=tuf PE=3 SV=1
Length = 428
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + +LL+++ +G + + P+ + SA VV+ ++P+ +E +++ +
Sbjct: 344 LHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+TIAAG++ +
Sbjct: 404 LGRFAIRDMGMTIAAGMVISI 424
>sp|Q8U152|EF1A_PYRFU Elongation factor 1-alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=tuf PE=3 SV=1
Length = 428
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 48/81 (59%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + +LL+++ +G ++ + P+ + +A V++ ++P+ +E +++ +
Sbjct: 344 LHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQ 403
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+TIAAG++ +
Sbjct: 404 LGRFAIRDMGMTIAAGMVISI 424
>sp|P26751|EF1A_PYRWO Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1
Length = 430
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 48/81 (59%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + +LL+++ +G ++ + P+ + +A V++ ++P+ +E +++ +
Sbjct: 346 LHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQ 405
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+TIAAG++ +
Sbjct: 406 LGRFAIRDMGMTIAAGMVISI 426
>sp|P27634|EF1A_RHYAM Elongation factor 1-alpha (Fragment) OS=Rhynchosciara americana
PE=2 SV=1
Length = 412
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 155 QVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGL 214
+V + SG+ P+A+ +A V+++ +P+CVE +++ LGRF +R T+A G+
Sbjct: 327 KVDRRSGKSTEDNPKAIKSGDAAIVILQPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGV 386
Query: 215 ITKVIF 220
I V+F
Sbjct: 387 IKSVVF 392
>sp|A4YCR6|EF1A_METS5 Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=tuf PE=3 SV=1
Length = 435
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 103 TCTSPTPDQEPSRSVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGE 162
T PT +E + V +V VG+ + V H S+A ++ +++++ +G+
Sbjct: 316 TTNPPTVAEEFTARVIVVWHPTALAVGYTPVVHV--HTASIA--CRVSEIVARLDPKTGK 371
Query: 163 VIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
K P+ + + SA V + ++P+CVE + D LGRF +R G T+ G+I V
Sbjct: 372 EAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDV 427
>sp|O29325|EF1A_ARCFU Elongation factor 1-alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=tuf PE=3 SV=1
Length = 423
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
+H + + L ++ +G+V + P+ L +A V +E RPM +E +D+
Sbjct: 339 VHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPP 398
Query: 198 LGRFMLRVSGVTIAAGLI 215
+GRF +R G+TI AG++
Sbjct: 399 MGRFAIRDMGMTIGAGMV 416
>sp|A6UV43|EF1A_META3 Elongation factor 1-alpha OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1
Length = 428
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 107 PTPDQEPSRSVKLVKLSNVYQVGFIKELKVGMHQQSLAESAVITRLLSQVHKTSGEVIRK 166
PT +E + + +++ +V VG+ H + + L +++ +GEV +
Sbjct: 316 PTVAEEFTAQIVVLQHPSVMTVGYTPVF----HAHTAQVACTFMELQKKLNPATGEVKEE 371
Query: 167 KPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGVTIAAGLITKV 218
P L +A V I +PM +E +++ +LGRF +R G+T+AAG+ V
Sbjct: 372 NPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDV 423
>sp|Q2FRI3|EF1A_METHJ Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=tuf PE=3 SV=1
Length = 425
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
H + + T L+ ++ +G+ + + P L +A + +P+C+E ++ +
Sbjct: 339 FHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAIIKCHPTKPLCLENAKEFPQ 398
Query: 198 LGRFMLRVSGVTIAAGLITKVIFDQ 222
LGRF +R G TIAAG+ V+ Q
Sbjct: 399 LGRFAIRDMGQTIAAGMCINVVKKQ 423
>sp|P86933|EF1A_TRYBB Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=2
SV=1
Length = 449
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 149 ITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKELGRFMLRVSGV 208
+ S++ + SG+ + K P+++ +A V + +PMCVE++ D LGRF +R
Sbjct: 360 FAEIESKIDRRSGKELEKAPKSIKSGDAAIVRMVPQKPMCVEVFNDYAPLGRFAVRDMRQ 419
Query: 209 TIAAGLITKV 218
T+A G+I V
Sbjct: 420 TVAVGIIKAV 429
>sp|A6VGV6|EF1A_METM7 Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=tuf PE=3 SV=1
Length = 428
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 138 MHQQSLAESAVITRLLSQVHKTSGEVIRKKPRALTKSMSAQVVIETVRPMCVELYRDVKE 197
H + + L +++ +GEV+ + P L +A V + +P+ +E +++ +
Sbjct: 343 FHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQ 402
Query: 198 LGRFMLRVSGVTIAAGLITKV 218
LGRF +R G+T+AAG+ +V
Sbjct: 403 LGRFAIRDMGMTVAAGMAIQV 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,766,672
Number of Sequences: 539616
Number of extensions: 3178828
Number of successful extensions: 26478
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 518
Number of HSP's that attempted gapping in prelim test: 21351
Number of HSP's gapped (non-prelim): 4454
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)